Query 024997
Match_columns 259
No_of_seqs 117 out of 1357
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 09:08:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024997.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024997hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-44 2.3E-49 313.3 23.5 240 1-258 120-391 (393)
2 PLN00175 aminotransferase fami 100.0 1.4E-39 2.9E-44 285.0 23.3 238 1-258 146-413 (413)
3 PRK07681 aspartate aminotransf 100.0 2.2E-39 4.8E-44 283.0 23.2 234 1-254 124-384 (399)
4 PRK06207 aspartate aminotransf 100.0 3.8E-39 8.2E-44 281.7 23.3 239 1-258 133-402 (405)
5 PRK07366 succinyldiaminopimela 100.0 3.6E-39 7.9E-44 280.8 21.8 236 1-256 123-388 (388)
6 PRK06348 aspartate aminotransf 100.0 8.8E-39 1.9E-43 277.9 23.3 236 1-255 120-382 (384)
7 PRK07324 transaminase; Validat 100.0 1E-38 2.3E-43 276.2 22.7 238 1-258 111-370 (373)
8 PRK07682 hypothetical protein; 100.0 8.5E-39 1.8E-43 277.5 21.4 238 1-258 112-376 (378)
9 KOG0257 Kynurenine aminotransf 100.0 1.1E-39 2.5E-44 270.8 14.5 239 1-254 124-415 (420)
10 TIGR03540 DapC_direct LL-diami 100.0 2.9E-38 6.2E-43 274.7 24.0 234 1-254 122-382 (383)
11 PRK08068 transaminase; Reviewe 100.0 2.1E-38 4.6E-43 276.0 23.0 235 1-255 125-386 (389)
12 PRK09147 succinyldiaminopimela 100.0 1.7E-38 3.7E-43 277.2 22.3 235 1-257 124-395 (396)
13 PRK08636 aspartate aminotransf 100.0 2.9E-38 6.3E-43 276.2 23.8 238 1-258 126-400 (403)
14 PRK15481 transcriptional regul 100.0 1.8E-38 4E-43 279.7 22.4 238 1-258 172-431 (431)
15 PRK08960 hypothetical protein; 100.0 3.7E-38 8E-43 274.3 23.6 238 1-257 123-386 (387)
16 PRK12414 putative aminotransfe 100.0 3.3E-38 7.1E-43 274.2 23.0 233 1-254 121-383 (384)
17 PLN02187 rooty/superroot1 100.0 3.7E-38 8.1E-43 278.9 23.0 240 1-258 162-438 (462)
18 PRK09276 LL-diaminopimelate am 100.0 4.5E-38 9.8E-43 273.6 22.7 234 1-254 124-384 (385)
19 PRK09275 aspartate aminotransf 100.0 1.2E-38 2.6E-43 282.1 18.1 238 1-258 197-517 (527)
20 PRK05957 aspartate aminotransf 100.0 1.4E-37 3E-42 270.7 23.9 240 1-258 120-385 (389)
21 TIGR03538 DapC_gpp succinyldia 100.0 1.4E-37 3E-42 271.2 23.0 234 1-256 123-393 (393)
22 PLN00143 tyrosine/nicotianamin 100.0 1.3E-37 2.8E-42 272.4 22.8 240 1-258 128-404 (409)
23 PLN00145 tyrosine/nicotianamin 100.0 1.5E-37 3.3E-42 273.1 23.1 239 1-258 148-424 (430)
24 PRK09148 aminotransferase; Val 100.0 2.1E-37 4.6E-42 270.8 23.7 237 1-257 123-389 (405)
25 PRK06107 aspartate aminotransf 100.0 1.8E-37 3.9E-42 271.1 23.2 238 1-258 124-400 (402)
26 PRK07683 aminotransferase A; V 100.0 2.6E-37 5.6E-42 268.9 24.0 238 1-258 120-383 (387)
27 PRK06855 aminotransferase; Val 100.0 1.1E-37 2.4E-42 274.5 21.9 241 1-258 126-429 (433)
28 PRK05942 aspartate aminotransf 100.0 1.7E-37 3.6E-42 270.7 22.7 235 1-255 128-389 (394)
29 PRK08912 hypothetical protein; 100.0 2E-37 4.2E-42 269.8 22.8 238 1-258 118-386 (387)
30 KOG0259 Tyrosine aminotransfer 100.0 2.3E-37 5E-42 253.3 21.3 239 2-258 158-433 (447)
31 PRK06108 aspartate aminotransf 100.0 3.3E-37 7.1E-42 268.0 23.4 239 1-258 115-382 (382)
32 PRK07337 aminotransferase; Val 100.0 2.9E-37 6.2E-42 268.8 22.9 237 1-256 121-387 (388)
33 PRK09082 methionine aminotrans 100.0 1E-37 2.2E-42 271.4 20.0 234 1-254 122-385 (386)
34 PLN02656 tyrosine transaminase 100.0 3.3E-37 7.2E-42 269.9 23.0 240 1-258 127-403 (409)
35 PLN02450 1-aminocyclopropane-1 100.0 2.3E-37 5E-42 274.2 21.0 239 1-258 142-430 (468)
36 TIGR03537 DapC succinyldiamino 100.0 4.7E-37 1E-41 264.0 22.3 234 1-255 94-350 (350)
37 PTZ00377 alanine aminotransfer 100.0 1.5E-37 3.2E-42 277.1 19.7 243 1-258 170-475 (481)
38 PRK07590 L,L-diaminopimelate a 100.0 6.3E-37 1.4E-41 268.3 23.1 237 1-256 129-409 (409)
39 TIGR03801 asp_4_decarbox aspar 100.0 1.4E-37 3E-42 274.9 18.8 237 1-257 191-515 (521)
40 TIGR01264 tyr_amTase_E tyrosin 100.0 5.2E-37 1.1E-41 268.3 22.2 239 1-258 126-399 (401)
41 PTZ00433 tyrosine aminotransfe 100.0 7E-37 1.5E-41 268.2 22.9 239 1-258 135-408 (412)
42 PRK06290 aspartate aminotransf 100.0 7.7E-37 1.7E-41 267.1 22.8 234 1-258 137-405 (410)
43 PRK05839 hypothetical protein; 100.0 6.2E-37 1.3E-41 265.3 21.4 227 1-257 116-373 (374)
44 PRK07309 aromatic amino acid a 100.0 1.4E-36 3E-41 264.6 23.5 238 1-258 122-388 (391)
45 PLN02607 1-aminocyclopropane-1 100.0 1.6E-36 3.6E-41 267.0 21.3 239 1-258 151-437 (447)
46 PRK08361 aspartate aminotransf 100.0 1.7E-36 3.7E-41 264.2 21.1 241 1-258 124-390 (391)
47 PRK08363 alanine aminotransfer 100.0 4.6E-36 9.9E-41 262.1 23.6 239 1-258 124-394 (398)
48 PRK13355 bifunctional HTH-doma 100.0 2.1E-36 4.6E-41 271.7 22.0 241 1-258 239-514 (517)
49 PLN02376 1-aminocyclopropane-1 100.0 2E-36 4.3E-41 269.3 21.3 238 1-257 150-437 (496)
50 PRK07777 aminotransferase; Val 100.0 5.1E-36 1.1E-40 260.9 23.0 237 1-257 116-385 (387)
51 COG1168 MalY Bifunctional PLP- 100.0 5.3E-36 1.2E-40 246.7 21.4 241 1-258 114-386 (388)
52 PRK08175 aminotransferase; Val 100.0 4.8E-36 1E-40 261.6 21.5 238 1-258 122-389 (395)
53 TIGR01265 tyr_nico_aTase tyros 100.0 1.8E-35 3.8E-40 258.7 23.6 239 1-258 127-401 (403)
54 PLN02231 alanine transaminase 100.0 5E-36 1.1E-40 268.3 20.5 244 1-258 223-527 (534)
55 PRK09440 avtA valine--pyruvate 100.0 1.8E-35 4E-40 259.7 23.4 241 1-258 134-411 (416)
56 TIGR03542 DAPAT_plant LL-diami 100.0 2E-35 4.2E-40 258.3 23.3 237 1-256 125-402 (402)
57 PRK07865 N-succinyldiaminopime 100.0 2.5E-35 5.3E-40 254.6 23.1 227 1-253 118-363 (364)
58 PRK05764 aspartate aminotransf 100.0 3.4E-35 7.3E-40 256.3 24.0 238 1-258 122-391 (393)
59 COG1167 ARO8 Transcriptional r 100.0 3.4E-35 7.4E-40 259.3 22.8 242 1-258 186-455 (459)
60 COG0079 HisC Histidinol-phosph 100.0 2.9E-35 6.2E-40 250.7 20.9 234 1-258 106-354 (356)
61 PRK06358 threonine-phosphate d 100.0 5.1E-35 1.1E-39 251.6 21.0 231 1-257 100-354 (354)
62 PRK06425 histidinol-phosphate 100.0 2.8E-35 6.1E-40 251.1 19.1 226 1-256 86-331 (332)
63 PRK07550 hypothetical protein; 100.0 8.1E-35 1.7E-39 253.3 22.0 235 1-255 121-384 (386)
64 PRK07568 aspartate aminotransf 100.0 1.5E-34 3.3E-39 252.5 23.4 239 1-258 119-392 (397)
65 PRK09265 aminotransferase AlaT 100.0 1.8E-34 4E-39 252.4 23.4 239 1-258 126-401 (404)
66 PF04864 Alliinase_C: Allinase 100.0 4.6E-35 1E-39 238.7 17.8 256 1-256 103-363 (363)
67 TIGR03539 DapC_actino succinyl 100.0 1.5E-34 3.3E-39 249.0 21.9 227 1-253 112-357 (357)
68 PRK04781 histidinol-phosphate 100.0 1.4E-34 3E-39 249.7 21.5 234 1-257 108-362 (364)
69 PRK08056 threonine-phosphate d 100.0 3.2E-34 6.9E-39 246.9 20.1 232 1-257 101-354 (356)
70 PRK07392 threonine-phosphate d 100.0 6.1E-34 1.3E-38 245.5 21.1 227 1-252 104-356 (360)
71 PF00155 Aminotran_1_2: Aminot 100.0 1.8E-34 3.8E-39 249.2 17.4 232 1-252 100-363 (363)
72 PTZ00376 aspartate aminotransf 100.0 2.5E-34 5.4E-39 251.4 18.3 234 1-257 131-402 (404)
73 PRK05664 threonine-phosphate d 100.0 1.4E-33 3.1E-38 240.4 22.4 222 1-258 93-328 (330)
74 PLN03026 histidinol-phosphate 100.0 7E-34 1.5E-38 246.6 20.7 229 1-255 134-379 (380)
75 PRK14809 histidinol-phosphate 100.0 4.4E-34 9.6E-39 246.2 19.0 225 1-257 113-356 (357)
76 PRK02610 histidinol-phosphate 100.0 6.5E-34 1.4E-38 246.5 20.1 227 1-258 123-371 (374)
77 PRK06959 putative threonine-ph 100.0 1.2E-33 2.6E-38 241.5 21.4 221 1-257 100-332 (339)
78 PRK01688 histidinol-phosphate 100.0 2.2E-34 4.7E-39 247.4 15.3 227 1-252 106-350 (351)
79 PRK06836 aspartate aminotransf 100.0 3.4E-33 7.3E-38 243.6 23.0 232 1-258 127-391 (394)
80 PLN02397 aspartate transaminas 100.0 7.1E-34 1.5E-38 249.5 18.5 235 1-257 149-420 (423)
81 PRK03158 histidinol-phosphate 100.0 1.9E-33 4.2E-38 242.4 20.0 229 1-256 112-359 (359)
82 PRK09257 aromatic amino acid a 100.0 1.1E-33 2.4E-38 246.9 17.7 234 1-256 127-396 (396)
83 PRK01533 histidinol-phosphate 100.0 8.8E-34 1.9E-38 244.6 16.5 223 1-257 112-354 (366)
84 PLN02672 methionine S-methyltr 100.0 2.5E-33 5.5E-38 262.3 20.6 240 1-257 785-1079(1082)
85 PRK14807 histidinol-phosphate 100.0 5.5E-33 1.2E-37 238.8 21.2 229 1-256 107-350 (351)
86 PRK00950 histidinol-phosphate 100.0 3.5E-33 7.6E-38 241.0 17.9 229 1-257 118-361 (361)
87 PRK07908 hypothetical protein; 100.0 2.6E-32 5.5E-37 234.6 23.1 228 1-257 103-346 (349)
88 PRK05387 histidinol-phosphate 100.0 1.4E-32 2.9E-37 236.6 20.6 230 1-258 108-353 (353)
89 KOG0256 1-aminocyclopropane-1- 100.0 1.4E-32 3E-37 227.2 19.5 239 1-257 177-460 (471)
90 PRK05166 histidinol-phosphate 100.0 1.8E-32 4E-37 237.2 21.0 230 1-256 119-369 (371)
91 PRK06225 aspartate aminotransf 100.0 6.7E-32 1.5E-36 234.5 24.5 238 1-257 114-375 (380)
92 PRK09105 putative aminotransfe 100.0 1.5E-32 3.3E-37 237.3 20.3 226 1-256 126-368 (370)
93 PRK04870 histidinol-phosphate 100.0 8.2E-33 1.8E-37 238.2 17.9 229 1-256 112-356 (356)
94 PRK08153 histidinol-phosphate 100.0 5.1E-32 1.1E-36 234.2 22.0 230 1-257 115-364 (369)
95 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.1E-32 4.5E-37 233.3 18.9 224 1-252 93-329 (330)
96 PRK14808 histidinol-phosphate 100.0 5.5E-32 1.2E-36 231.0 20.1 223 1-255 103-334 (335)
97 PRK08637 hypothetical protein; 100.0 3.2E-32 7E-37 237.0 18.8 240 1-258 100-386 (388)
98 PRK02731 histidinol-phosphate 100.0 1E-31 2.2E-36 232.4 20.7 232 1-258 115-366 (367)
99 PRK04635 histidinol-phosphate 100.0 4.5E-32 9.7E-37 233.4 18.0 229 1-256 109-353 (354)
100 PRK08354 putative aminotransfe 100.0 1.6E-31 3.5E-36 226.0 20.9 215 1-254 84-308 (311)
101 PRK03317 histidinol-phosphate 100.0 1.1E-31 2.5E-36 232.1 19.1 229 1-259 119-365 (368)
102 PRK03967 histidinol-phosphate 100.0 7.9E-32 1.7E-36 230.3 17.4 218 1-256 101-332 (337)
103 TIGR01141 hisC histidinol-phos 100.0 6E-31 1.3E-35 225.8 18.2 227 1-252 102-345 (346)
104 KOG0634 Aromatic amino acid am 100.0 4E-30 8.8E-35 214.2 19.6 245 2-258 156-466 (472)
105 PLN02368 alanine transaminase 100.0 1.4E-30 3E-35 226.7 13.0 190 1-205 162-398 (407)
106 PRK03321 putative aminotransfe 100.0 1.5E-29 3.3E-34 217.6 17.9 226 1-257 105-350 (352)
107 COG3977 Alanine-alpha-ketoisov 100.0 1.6E-28 3.6E-33 195.9 18.1 222 19-258 165-411 (417)
108 KOG0633 Histidinol phosphate a 99.9 5.6E-26 1.2E-30 178.2 15.9 235 2-256 119-375 (375)
109 TIGR03576 pyridox_MJ0158 pyrid 99.9 3.1E-25 6.7E-30 189.6 21.4 224 2-256 106-345 (346)
110 cd00609 AAT_like Aspartate ami 99.9 2.9E-24 6.3E-29 184.0 23.6 235 1-253 90-349 (350)
111 PF12897 Aminotran_MocR: Alani 99.9 2.9E-23 6.4E-28 172.1 21.7 243 1-256 131-413 (425)
112 PRK13238 tnaA tryptophanase/L- 99.9 3E-23 6.6E-28 183.1 16.5 236 1-257 123-432 (460)
113 PRK07049 methionine gamma-lyas 99.9 1.5E-22 3.1E-27 177.6 19.7 243 1-258 129-426 (427)
114 PRK10874 cysteine sulfinate de 99.9 2.3E-22 5E-27 176.0 20.4 231 7-258 126-398 (401)
115 TIGR00858 bioF 8-amino-7-oxono 99.9 1.8E-22 4E-27 173.9 18.4 228 1-253 107-360 (360)
116 PRK13392 5-aminolevulinate syn 99.9 1.8E-22 4E-27 177.0 17.6 225 9-258 147-397 (410)
117 TIGR03392 FeS_syn_CsdA cystein 99.9 6.7E-22 1.5E-26 172.9 20.0 231 7-258 123-395 (398)
118 KOG0258 Alanine aminotransfera 99.9 1.9E-22 4.1E-27 166.4 14.5 238 2-256 169-467 (475)
119 PRK08247 cystathionine gamma-s 99.9 3.1E-21 6.8E-26 166.5 22.3 230 1-256 97-362 (366)
120 TIGR01822 2am3keto_CoA 2-amino 99.9 2.3E-21 4.9E-26 169.3 19.8 232 1-258 129-389 (393)
121 PRK02627 acetylornithine amino 99.9 2.1E-21 4.4E-26 169.7 19.4 207 24-258 171-394 (396)
122 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.9E-21 4.1E-26 168.4 17.4 226 4-258 101-368 (370)
123 PRK01278 argD acetylornithine 99.9 1.8E-21 4E-26 169.6 17.4 212 23-258 163-388 (389)
124 PRK06939 2-amino-3-ketobutyrat 99.9 3.8E-21 8.3E-26 167.9 19.2 232 1-258 133-393 (397)
125 PLN02483 serine palmitoyltrans 99.9 1E-20 2.2E-25 168.6 21.7 236 1-257 192-465 (489)
126 PLN02822 serine palmitoyltrans 99.9 5.5E-21 1.2E-25 170.1 19.4 199 37-258 247-477 (481)
127 PRK06460 hypothetical protein; 99.9 7.9E-21 1.7E-25 164.4 19.2 168 2-180 96-270 (376)
128 PRK05093 argD bifunctional N-s 99.9 6.8E-21 1.5E-25 166.7 18.0 208 24-258 173-400 (403)
129 PRK10534 L-threonine aldolase; 99.9 7.1E-21 1.5E-25 162.6 17.6 200 20-258 108-333 (333)
130 TIGR00707 argD acetylornithine 99.9 1.8E-20 3.8E-25 162.9 20.3 227 1-256 122-379 (379)
131 COG1448 TyrB Aspartate/tyrosin 99.9 4.2E-21 9.2E-26 158.9 15.0 234 1-256 127-396 (396)
132 PRK04073 rocD ornithine--oxo-a 99.9 7.2E-21 1.6E-25 166.2 17.0 208 24-257 175-396 (396)
133 cd00378 SHMT Serine-glycine hy 99.9 4.8E-20 1E-24 161.4 21.8 237 1-258 112-385 (402)
134 PRK02948 cysteine desulfurase; 99.9 4.5E-21 9.9E-26 166.7 14.9 219 21-257 124-373 (381)
135 TIGR01825 gly_Cac_T_rel pyrido 99.9 3.2E-20 6.9E-25 161.6 19.4 231 1-258 124-381 (385)
136 PRK09064 5-aminolevulinate syn 99.9 3.2E-20 6.9E-25 162.8 19.4 210 23-257 162-396 (407)
137 PRK05958 8-amino-7-oxononanoat 99.9 5.2E-20 1.1E-24 160.1 20.1 231 1-256 130-385 (385)
138 cd06454 KBL_like KBL_like; thi 99.9 4.2E-20 9.1E-25 158.6 19.2 231 1-255 92-348 (349)
139 PRK09295 bifunctional cysteine 99.9 3.9E-20 8.3E-25 162.2 18.8 229 6-256 129-402 (406)
140 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.6E-19 3.5E-24 155.3 21.9 232 2-256 83-355 (355)
141 PRK08776 cystathionine gamma-s 99.9 1.9E-19 4.2E-24 156.9 22.5 207 1-219 106-328 (405)
142 TIGR01821 5aminolev_synth 5-am 99.9 6.8E-20 1.5E-24 160.4 19.4 211 23-258 161-396 (402)
143 cd06451 AGAT_like Alanine-glyo 99.9 1.8E-19 3.9E-24 155.3 21.7 232 7-257 89-356 (356)
144 TIGR01979 sufS cysteine desulf 99.8 6.7E-20 1.5E-24 160.5 18.6 230 7-257 125-400 (403)
145 PRK03244 argD acetylornithine 99.8 4.6E-20 1E-24 161.3 17.0 207 23-258 171-394 (398)
146 PLN02721 threonine aldolase 99.8 1.4E-19 3E-24 155.7 19.3 227 1-257 87-351 (353)
147 PRK08133 O-succinylhomoserine 99.8 2.1E-19 4.4E-24 156.3 20.2 234 9-257 119-389 (390)
148 PLN02242 methionine gamma-lyas 99.8 1.9E-19 4.2E-24 157.4 19.8 162 1-172 122-298 (418)
149 TIGR01976 am_tr_V_VC1184 cyste 99.8 2.5E-19 5.3E-24 156.7 20.1 223 9-252 123-397 (397)
150 PRK06767 methionine gamma-lyas 99.8 1.7E-19 3.6E-24 156.8 18.3 219 23-257 134-384 (386)
151 PRK08045 cystathionine gamma-s 99.8 4.2E-19 9.1E-24 154.0 20.3 186 23-219 125-320 (386)
152 PRK02936 argD acetylornithine 99.8 1.6E-19 3.5E-24 156.8 17.7 204 24-256 156-377 (377)
153 PRK06234 methionine gamma-lyas 99.8 4.1E-19 8.9E-24 154.9 19.7 168 2-180 111-293 (400)
154 TIGR03403 nifS_epsilon cystein 99.8 1.3E-19 2.8E-24 157.7 16.2 216 21-258 126-375 (382)
155 TIGR02080 O_succ_thio_ly O-suc 99.8 4.2E-19 9.2E-24 153.8 19.1 221 23-257 124-380 (382)
156 PRK07505 hypothetical protein; 99.8 4.7E-19 1E-23 155.1 19.6 211 23-258 167-399 (402)
157 cd00617 Tnase_like Tryptophana 99.8 1.1E-19 2.4E-24 158.6 15.4 237 1-258 98-408 (431)
158 PLN02855 Bifunctional selenocy 99.8 3E-19 6.4E-24 157.4 18.3 237 6-257 138-417 (424)
159 PRK07179 hypothetical protein; 99.8 6.3E-19 1.4E-23 154.6 19.8 220 10-258 154-398 (407)
160 PRK07582 cystathionine gamma-l 99.8 1.7E-18 3.7E-23 149.4 22.2 240 1-257 96-364 (366)
161 PRK07504 O-succinylhomoserine 99.8 4.6E-19 9.9E-24 154.5 18.7 206 2-219 112-333 (398)
162 PRK08249 cystathionine gamma-s 99.8 6.5E-19 1.4E-23 153.4 19.4 205 2-219 111-331 (398)
163 PRK13393 5-aminolevulinate syn 99.8 8.6E-19 1.9E-23 153.6 20.1 210 23-257 161-395 (406)
164 PRK07810 O-succinylhomoserine 99.8 1.1E-18 2.4E-23 152.2 20.7 241 2-255 121-401 (403)
165 PRK04260 acetylornithine amino 99.8 6.5E-19 1.4E-23 152.9 18.2 206 23-256 153-375 (375)
166 PRK13479 2-aminoethylphosphona 99.8 1.7E-18 3.6E-23 149.9 20.1 230 9-258 97-363 (368)
167 TIGR02326 transamin_PhnW 2-ami 99.8 3.6E-18 7.8E-23 147.6 21.4 229 9-257 95-361 (363)
168 PRK08064 cystathionine beta-ly 99.8 2.2E-18 4.9E-23 149.8 19.8 234 9-254 111-382 (390)
169 cd00614 CGS_like CGS_like: Cys 99.8 3.9E-18 8.5E-23 147.5 21.0 231 13-256 102-368 (369)
170 cd06453 SufS_like Cysteine des 99.8 1.1E-18 2.5E-23 151.2 17.7 213 21-252 125-373 (373)
171 PRK08088 4-aminobutyrate amino 99.8 1.2E-18 2.5E-23 153.5 16.7 210 26-258 185-423 (425)
172 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 3.2E-18 7E-23 147.8 19.1 225 9-257 98-361 (361)
173 PRK07811 cystathionine gamma-s 99.8 5.4E-18 1.2E-22 147.3 20.5 220 23-257 134-387 (388)
174 TIGR01325 O_suc_HS_sulf O-succ 99.8 6.2E-18 1.3E-22 146.7 20.3 197 9-219 112-320 (380)
175 PRK07503 methionine gamma-lyas 99.8 4.7E-18 1E-22 148.4 19.1 158 11-180 125-292 (403)
176 PTZ00125 ornithine aminotransf 99.8 2.7E-18 5.8E-23 150.3 17.3 209 23-258 165-395 (400)
177 PRK08574 cystathionine gamma-s 99.8 6.7E-18 1.4E-22 146.5 19.1 243 1-257 99-383 (385)
178 TIGR03402 FeS_nifS cysteine de 99.8 5.5E-18 1.2E-22 147.3 18.2 216 21-257 122-371 (379)
179 PRK12381 bifunctional succinyl 99.8 5.4E-18 1.2E-22 148.5 17.9 210 23-257 171-398 (406)
180 TIGR01329 cysta_beta_ly_E cyst 99.8 9.7E-18 2.1E-22 145.3 19.2 243 2-257 93-374 (378)
181 PRK00854 rocD ornithine--oxo-a 99.8 6.5E-18 1.4E-22 147.9 18.0 208 23-257 175-400 (401)
182 PRK08861 cystathionine gamma-s 99.8 1.2E-17 2.6E-22 144.6 19.0 186 23-219 126-321 (388)
183 PLN00144 acetylornithine trans 99.8 6.3E-18 1.4E-22 146.7 17.0 207 24-258 155-380 (382)
184 cd00610 OAT_like Acetyl ornith 99.8 2.9E-18 6.2E-23 150.7 15.0 208 24-256 177-413 (413)
185 TIGR01328 met_gam_lyase methio 99.8 1.1E-17 2.4E-22 145.5 18.2 232 11-257 119-389 (391)
186 COG0520 csdA Selenocysteine ly 99.8 5.9E-17 1.3E-21 140.6 21.9 231 7-257 128-404 (405)
187 PRK07671 cystathionine beta-ly 99.8 5.5E-17 1.2E-21 140.5 21.0 242 1-256 95-376 (377)
188 PRK07050 cystathionine beta-ly 99.8 5.4E-17 1.2E-21 141.3 20.2 167 1-178 111-289 (394)
189 cd06502 TA_like Low-specificit 99.8 2.5E-17 5.3E-22 140.9 17.5 220 2-254 79-337 (338)
190 PRK07269 cystathionine gamma-s 99.8 3.9E-17 8.4E-22 140.6 18.6 210 21-256 122-362 (364)
191 PRK09028 cystathionine beta-ly 99.8 1.3E-16 2.8E-21 138.2 21.6 207 1-218 107-328 (394)
192 PRK00451 glycine dehydrogenase 99.8 4.5E-17 9.8E-22 144.5 18.3 232 1-256 161-446 (447)
193 PRK05939 hypothetical protein; 99.8 2.3E-16 5E-21 137.3 22.1 240 2-257 94-395 (397)
194 cd00613 GDC-P Glycine cleavage 99.8 5.7E-17 1.2E-21 141.8 18.3 227 1-252 115-398 (398)
195 PRK13520 L-tyrosine decarboxyl 99.8 1.8E-16 3.9E-21 137.3 21.0 232 2-258 112-371 (371)
196 TIGR00700 GABAtrnsam 4-aminobu 99.8 5.5E-17 1.2E-21 142.7 17.6 201 34-257 196-419 (420)
197 PLN02409 serine--glyoxylate am 99.8 2E-16 4.3E-21 138.4 21.0 232 9-258 101-372 (401)
198 PRK04612 argD acetylornithine 99.8 1E-16 2.2E-21 140.0 19.2 211 24-258 175-403 (408)
199 COG0156 BioF 7-keto-8-aminopel 99.7 1.1E-16 2.4E-21 136.8 17.9 217 13-255 142-387 (388)
200 TIGR01324 cysta_beta_ly_B cyst 99.7 1.3E-15 2.8E-20 131.8 23.9 169 1-180 96-275 (377)
201 PRK05967 cystathionine beta-ly 99.7 5.5E-16 1.2E-20 134.1 21.4 208 1-219 110-335 (395)
202 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 7.8E-17 1.7E-21 141.5 16.2 236 8-256 114-417 (418)
203 TIGR03812 tyr_de_CO2_Arch tyro 99.7 3.3E-16 7.2E-21 135.8 20.0 229 1-254 113-372 (373)
204 PRK08248 O-acetylhomoserine am 99.7 1.3E-16 2.9E-21 140.0 17.4 200 9-219 122-365 (431)
205 TIGR01437 selA_rel uncharacter 99.7 2.3E-16 5E-21 136.1 18.4 236 2-256 107-363 (363)
206 PRK06918 4-aminobutyrate amino 99.7 1.3E-16 2.8E-21 141.4 16.8 203 34-258 217-443 (451)
207 TIGR03246 arg_catab_astC succi 99.7 2.1E-16 4.6E-21 138.1 17.9 212 23-258 167-395 (397)
208 PRK06176 cystathionine gamma-s 99.7 3.6E-16 7.8E-21 135.5 18.7 229 14-257 112-377 (380)
209 PLN02509 cystathionine beta-ly 99.7 6.5E-16 1.4E-20 136.2 20.4 242 1-257 178-460 (464)
210 TIGR00713 hemL glutamate-1-sem 99.7 7.6E-17 1.6E-21 142.1 14.6 207 24-258 181-422 (423)
211 PRK05968 hypothetical protein; 99.7 7.2E-16 1.6E-20 134.1 20.2 218 9-240 121-370 (389)
212 PLN02624 ornithine-delta-amino 99.7 1.1E-16 2.5E-21 142.3 15.4 214 24-258 210-444 (474)
213 TIGR01977 am_tr_V_EF2568 cyste 99.7 4.1E-16 8.8E-21 135.4 17.6 218 21-254 123-375 (376)
214 PRK06084 O-acetylhomoserine am 99.7 6.6E-16 1.4E-20 135.5 18.5 148 23-180 131-317 (425)
215 PRK06777 4-aminobutyrate amino 99.7 9.2E-16 2E-20 134.8 18.3 209 25-257 183-420 (421)
216 PRK00011 glyA serine hydroxyme 99.7 3.2E-15 7E-20 131.5 21.5 217 21-258 150-389 (416)
217 PRK09792 4-aminobutyrate trans 99.7 5.2E-16 1.1E-20 136.4 16.4 206 26-258 184-421 (421)
218 cd06450 DOPA_deC_like DOPA dec 99.7 1.3E-16 2.8E-21 136.8 12.2 211 2-254 103-344 (345)
219 PRK05937 8-amino-7-oxononanoat 99.7 1.2E-15 2.6E-20 132.2 17.9 205 22-258 124-350 (370)
220 PRK06702 O-acetylhomoserine am 99.7 1.9E-15 4.2E-20 132.1 18.7 233 11-256 121-422 (432)
221 TIGR02006 IscS cysteine desulf 99.7 8.7E-16 1.9E-20 134.5 16.5 216 21-257 128-376 (402)
222 PLN03227 serine palmitoyltrans 99.7 5.5E-15 1.2E-19 128.8 20.6 209 35-258 138-382 (392)
223 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 2.8E-15 6.2E-20 130.6 18.8 225 10-258 118-381 (387)
224 TIGR01885 Orn_aminotrans ornit 99.7 2.8E-15 6E-20 131.3 16.8 206 24-256 172-400 (401)
225 PRK14012 cysteine desulfurase; 99.7 4.3E-15 9.2E-20 130.3 17.3 216 21-257 130-378 (404)
226 TIGR03235 DNA_S_dndA cysteine 99.7 6.4E-16 1.4E-20 133.1 10.7 203 21-247 124-347 (353)
227 PLN02955 8-amino-7-oxononanoat 99.7 6.8E-15 1.5E-19 128.8 17.2 205 22-257 233-460 (476)
228 PRK08360 4-aminobutyrate amino 99.7 1.7E-14 3.7E-19 127.4 19.7 197 34-257 203-425 (443)
229 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 6E-15 1.3E-19 127.3 15.2 221 23-257 128-386 (386)
230 PRK05994 O-acetylhomoserine am 99.6 4.6E-14 1E-18 124.1 19.1 234 11-257 123-425 (427)
231 PRK08117 4-aminobutyrate amino 99.6 1.6E-14 3.5E-19 127.6 16.1 200 35-257 207-428 (433)
232 COG0626 MetC Cystathionine bet 99.6 4.5E-14 9.8E-19 120.8 17.7 183 25-219 138-332 (396)
233 PRK13580 serine hydroxymethylt 99.6 1.1E-13 2.4E-18 121.4 20.3 215 21-257 205-444 (493)
234 PRK08114 cystathionine beta-ly 99.6 8E-14 1.7E-18 120.6 19.1 195 14-219 125-333 (395)
235 KOG0053 Cystathionine beta-lya 99.6 1.2E-13 2.7E-18 117.0 18.6 141 25-175 152-298 (409)
236 PLN02651 cysteine desulfurase 99.6 1.9E-14 4.1E-19 124.5 13.7 207 21-246 124-364 (364)
237 PRK07495 4-aminobutyrate amino 99.6 9.5E-14 2E-18 122.1 17.8 200 35-258 198-421 (425)
238 KOG1412 Aspartate aminotransfe 99.6 7.8E-14 1.7E-18 112.7 15.5 235 1-257 132-404 (410)
239 COG1104 NifS Cysteine sulfinat 99.6 1.2E-13 2.5E-18 116.8 16.2 216 22-258 128-377 (386)
240 TIGR02407 ectoine_ectB diamino 99.6 4.1E-14 8.8E-19 124.1 14.0 209 25-258 178-412 (412)
241 PRK07812 O-acetylhomoserine am 99.6 4E-13 8.8E-18 118.1 19.5 186 23-219 143-369 (436)
242 PRK06058 4-aminobutyrate amino 99.6 3E-13 6.5E-18 119.7 18.3 206 28-258 211-442 (443)
243 TIGR02379 ECA_wecE TDP-4-keto- 99.6 6.4E-13 1.4E-17 115.1 19.6 114 1-120 78-208 (376)
244 KOG1360 5-aminolevulinate synt 99.5 2.4E-13 5.2E-18 113.4 15.1 212 22-256 286-522 (570)
245 PRK04366 glycine dehydrogenase 99.5 8.8E-13 1.9E-17 117.8 19.4 237 1-258 168-448 (481)
246 PRK08134 O-acetylhomoserine am 99.5 1.8E-12 3.9E-17 114.0 19.8 195 14-219 127-365 (433)
247 PRK00062 glutamate-1-semialdeh 99.5 6.3E-13 1.4E-17 117.2 16.0 209 23-258 182-424 (426)
248 COG4992 ArgD Ornithine/acetylo 99.5 6E-13 1.3E-17 112.5 14.5 212 23-258 172-398 (404)
249 PF00266 Aminotran_5: Aminotra 99.5 1.7E-12 3.6E-17 112.6 17.8 210 22-248 126-371 (371)
250 cd00616 AHBA_syn 3-amino-5-hyd 99.5 3.5E-12 7.6E-17 109.7 19.0 227 2-253 66-352 (352)
251 PRK13034 serine hydroxymethylt 99.5 2.1E-11 4.5E-16 107.2 23.3 216 21-257 153-391 (416)
252 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 1E-11 2.2E-16 107.8 19.8 237 1-257 78-375 (375)
253 COG2873 MET17 O-acetylhomoseri 99.5 6E-12 1.3E-16 104.4 17.1 225 22-258 134-425 (426)
254 TIGR01814 kynureninase kynuren 99.4 9.5E-12 2.1E-16 109.2 18.7 211 22-256 155-405 (406)
255 PRK09264 diaminobutyrate--2-ox 99.4 3.4E-12 7.4E-17 112.5 15.6 211 24-257 181-415 (425)
256 PRK05613 O-acetylhomoserine am 99.4 1.3E-11 2.8E-16 108.7 19.0 233 12-257 130-435 (437)
257 PRK03715 argD acetylornithine 99.4 7E-12 1.5E-16 109.4 16.6 210 23-258 167-393 (395)
258 PRK06434 cystathionine gamma-l 99.4 1E-11 2.2E-16 107.5 17.3 229 9-257 122-383 (384)
259 PRK11658 UDP-4-amino-4-deoxy-L 99.4 3.1E-11 6.7E-16 105.0 20.1 113 1-119 80-207 (379)
260 PRK06541 hypothetical protein; 99.4 2.5E-11 5.3E-16 107.8 18.5 207 26-258 208-455 (460)
261 TIGR01364 serC_1 phosphoserine 99.4 4.5E-11 9.7E-16 102.6 19.1 205 33-258 128-348 (349)
262 KOG1411 Aspartate aminotransfe 99.4 5.2E-13 1.1E-17 109.4 6.4 235 1-257 153-424 (427)
263 PTZ00094 serine hydroxymethylt 99.4 4.1E-11 9E-16 106.5 18.9 214 21-257 167-407 (452)
264 PRK05964 adenosylmethionine--8 99.4 3.1E-11 6.8E-16 106.4 17.8 208 25-258 186-422 (423)
265 PRK08593 4-aminobutyrate amino 99.4 4.1E-11 8.8E-16 106.1 17.9 196 34-257 206-428 (445)
266 cd00611 PSAT_like Phosphoserin 99.4 6.6E-11 1.4E-15 102.0 18.7 206 30-256 133-354 (355)
267 TIGR00709 dat 2,4-diaminobutyr 99.4 4.4E-11 9.6E-16 105.9 17.5 198 34-257 205-434 (442)
268 TIGR03588 PseC UDP-4-keto-6-de 99.4 1.5E-10 3.3E-15 100.7 19.9 233 1-256 76-380 (380)
269 TIGR01366 serC_3 phosphoserine 99.3 1.8E-10 3.9E-15 99.5 19.3 214 27-258 120-360 (361)
270 TIGR03531 selenium_SpcS O-phos 99.3 1E-10 2.2E-15 102.6 17.3 220 20-256 186-444 (444)
271 KOG1359 Glycine C-acetyltransf 99.3 1.1E-10 2.5E-15 94.0 14.5 199 33-257 191-411 (417)
272 PRK05355 3-phosphoserine/phosp 99.3 2.7E-10 5.9E-15 98.2 18.2 210 27-258 132-358 (360)
273 KOG1357 Serine palmitoyltransf 99.3 6.5E-11 1.4E-15 100.4 12.2 224 12-255 239-499 (519)
274 PRK11522 putrescine--2-oxoglut 99.3 4E-10 8.7E-15 100.0 17.8 210 24-257 214-450 (459)
275 TIGR03372 putres_am_tran putre 99.3 3.9E-10 8.4E-15 99.5 17.2 179 54-256 252-442 (442)
276 PLN03226 serine hydroxymethylt 99.2 2.6E-09 5.7E-14 95.1 20.9 211 22-257 169-418 (475)
277 PLN02724 Molybdenum cofactor s 99.2 7.9E-10 1.7E-14 104.6 18.4 207 34-256 191-486 (805)
278 PRK05769 4-aminobutyrate amino 99.2 6.7E-10 1.4E-14 98.3 16.9 194 35-258 221-439 (441)
279 cd00615 Orn_deC_like Ornithine 99.2 1.4E-11 3E-16 103.5 5.6 101 2-105 107-231 (294)
280 PRK03080 phosphoserine aminotr 99.2 2.2E-09 4.7E-14 93.4 18.8 203 36-258 137-373 (378)
281 PRK07678 aminotransferase; Val 99.2 1.9E-09 4.2E-14 95.6 18.7 201 34-258 212-449 (451)
282 COG0160 GabT 4-aminobutyrate a 99.2 9.9E-10 2.1E-14 95.5 15.8 200 35-258 222-445 (447)
283 PRK07986 adenosylmethionine--8 99.2 9.6E-10 2.1E-14 96.8 16.1 206 24-259 190-424 (428)
284 TIGR00508 bioA adenosylmethion 99.2 2.7E-09 5.8E-14 94.2 18.3 205 25-259 194-427 (427)
285 PLN02760 4-aminobutyrate:pyruv 99.2 2.3E-09 5E-14 96.1 17.5 196 35-257 260-490 (504)
286 PRK00615 glutamate-1-semialdeh 99.2 1.3E-09 2.9E-14 96.0 15.6 207 24-258 187-428 (433)
287 PRK12389 glutamate-1-semialdeh 99.2 2.6E-09 5.5E-14 94.4 16.8 207 24-258 186-427 (428)
288 PRK07046 aminotransferase; Val 99.1 3.9E-09 8.5E-14 93.6 17.2 209 24-258 206-450 (453)
289 PRK05630 adenosylmethionine--8 99.1 4.4E-09 9.5E-14 92.6 16.9 202 27-258 192-420 (422)
290 PRK13360 omega amino acid--pyr 99.1 2.9E-09 6.2E-14 94.3 15.8 203 26-258 202-440 (442)
291 PRK05639 4-aminobutyrate amino 99.1 4.9E-09 1.1E-13 93.1 17.2 198 34-257 221-442 (457)
292 PRK06173 adenosylmethionine--8 99.1 4.5E-09 9.7E-14 92.7 16.7 204 25-258 193-425 (429)
293 PRK07482 hypothetical protein; 99.1 4.7E-09 1E-13 93.4 17.0 210 25-257 206-453 (461)
294 PRK04311 selenocysteine syntha 99.1 1.4E-08 3E-13 90.0 19.7 241 10-257 187-463 (464)
295 PRK06062 hypothetical protein; 99.1 5.4E-09 1.2E-13 92.8 17.1 204 25-258 200-445 (451)
296 COG0075 Serine-pyruvate aminot 99.1 3.2E-08 7E-13 84.6 20.9 231 8-258 96-363 (383)
297 PLN02482 glutamate-1-semialdeh 99.1 5.2E-09 1.1E-13 93.1 16.1 210 24-258 232-473 (474)
298 PRK05965 hypothetical protein; 99.1 7.9E-09 1.7E-13 91.9 17.1 208 26-258 202-447 (459)
299 PRK09221 beta alanine--pyruvat 99.1 4.6E-09 1E-13 93.1 15.5 203 26-258 205-443 (445)
300 PRK06943 adenosylmethionine--8 99.1 8.8E-09 1.9E-13 91.5 17.3 203 26-258 209-446 (453)
301 PRK07481 hypothetical protein; 99.1 1.2E-08 2.5E-13 90.7 17.5 200 34-258 212-445 (449)
302 PRK15407 lipopolysaccharide bi 99.1 3.9E-08 8.3E-13 87.0 20.5 116 1-119 118-246 (438)
303 PRK06105 aminotransferase; Pro 99.1 1.4E-08 3E-13 90.4 17.7 207 26-258 205-449 (460)
304 PRK06938 diaminobutyrate--2-ox 99.0 8.1E-09 1.8E-13 91.9 15.5 182 54-258 259-460 (464)
305 PRK06917 hypothetical protein; 99.0 2.5E-08 5.5E-13 88.5 18.5 182 54-258 228-437 (447)
306 PRK08742 adenosylmethionine--8 99.0 2E-08 4.3E-13 89.5 17.3 206 26-258 224-467 (472)
307 PRK07480 putative aminotransfe 99.0 2E-08 4.4E-13 89.2 17.1 198 34-257 218-447 (456)
308 PRK08297 L-lysine aminotransfe 99.0 2E-08 4.3E-13 89.0 15.9 175 54-258 253-441 (443)
309 PRK12403 putative aminotransfe 99.0 6.1E-08 1.3E-12 86.3 18.6 177 54-258 250-452 (460)
310 PRK06082 4-aminobutyrate amino 99.0 2.9E-08 6.3E-13 88.3 16.5 202 27-257 219-450 (459)
311 KOG1549 Cysteine desulfurase N 99.0 5E-09 1.1E-13 89.5 10.7 84 21-107 167-256 (428)
312 COG0001 HemL Glutamate-1-semia 99.0 3.5E-08 7.5E-13 84.8 15.8 211 23-258 185-428 (432)
313 PRK07483 hypothetical protein; 99.0 4.2E-08 9.2E-13 86.9 17.0 182 54-258 228-437 (443)
314 PF00464 SHMT: Serine hydroxym 99.0 9.3E-08 2E-12 82.6 18.6 208 20-250 153-397 (399)
315 PLN02271 serine hydroxymethylt 99.0 1.2E-07 2.5E-12 84.5 19.5 214 22-257 284-539 (586)
316 PRK06931 diaminobutyrate--2-ox 99.0 4.8E-08 1E-12 86.9 17.3 182 54-258 253-454 (459)
317 PRK13237 tyrosine phenol-lyase 99.0 1.8E-07 3.9E-12 81.8 20.1 215 20-258 158-433 (460)
318 PRK06209 glutamate-1-semialdeh 99.0 4.5E-08 9.7E-13 86.6 16.6 205 24-257 173-404 (431)
319 PRK07030 adenosylmethionine--8 99.0 5E-08 1.1E-12 87.0 16.8 202 26-258 202-446 (466)
320 PRK02769 histidine decarboxyla 99.0 1.2E-07 2.5E-12 82.4 18.7 202 21-257 143-371 (380)
321 PRK06148 hypothetical protein; 98.9 8.4E-08 1.8E-12 92.9 19.3 183 54-258 812-1010(1013)
322 PRK06916 adenosylmethionine--8 98.9 5.5E-08 1.2E-12 86.6 16.8 202 26-258 211-455 (460)
323 PRK04013 argD acetylornithine/ 98.9 2.3E-08 5E-13 86.3 13.7 193 24-258 151-360 (364)
324 TIGR00474 selA seryl-tRNA(sec) 98.9 1.4E-07 3E-12 83.5 18.7 235 11-252 183-453 (454)
325 PRK07036 hypothetical protein; 98.9 1E-07 2.2E-12 85.0 18.0 194 34-257 219-451 (466)
326 COG0399 WecE Predicted pyridox 98.9 4.2E-07 9E-12 77.9 20.8 223 10-258 90-373 (374)
327 PRK06149 hypothetical protein; 98.9 9.4E-08 2E-12 92.4 18.8 180 54-258 772-970 (972)
328 TIGR02618 tyr_phenol_ly tyrosi 98.9 1.4E-07 3.1E-12 82.2 17.9 213 21-258 152-426 (450)
329 TIGR01788 Glu-decarb-GAD gluta 98.9 1.7E-07 3.6E-12 82.6 18.5 218 21-257 172-428 (431)
330 KOG1368 Threonine aldolase [Am 98.9 7.4E-08 1.6E-12 78.2 14.3 204 21-256 132-367 (384)
331 PF01041 DegT_DnrJ_EryC1: DegT 98.9 7.8E-08 1.7E-12 83.3 14.6 202 3-225 74-310 (363)
332 cd01494 AAT_I Aspartate aminot 98.8 7.7E-09 1.7E-13 79.0 6.8 103 2-106 49-169 (170)
333 PLN02414 glycine dehydrogenase 98.8 3E-07 6.5E-12 87.8 18.5 215 22-257 650-906 (993)
334 COG0112 GlyA Glycine/serine hy 98.8 1.2E-06 2.7E-11 73.9 20.0 214 21-257 151-389 (413)
335 TIGR00699 GABAtrns_euk 4-amino 98.8 5.2E-08 1.1E-12 86.4 12.4 205 26-256 239-464 (464)
336 KOG1404 Alanine-glyoxylate ami 98.8 2.1E-07 4.7E-12 78.1 14.4 176 54-252 240-432 (442)
337 PLN02974 adenosylmethionine-8- 98.8 4.1E-07 8.9E-12 85.6 17.6 197 35-257 584-817 (817)
338 TIGR03251 LAT_fam L-lysine 6-t 98.8 2.6E-07 5.6E-12 81.8 15.5 192 34-255 217-431 (431)
339 COG2008 GLY1 Threonine aldolas 98.7 4.2E-07 9E-12 76.0 13.9 206 22-256 111-341 (342)
340 COG0161 BioA Adenosylmethionin 98.7 6.5E-07 1.4E-11 77.9 15.4 208 25-258 200-443 (449)
341 KOG1402 Ornithine aminotransfe 98.7 9.5E-07 2.1E-11 72.8 14.0 207 24-257 195-426 (427)
342 PLN02452 phosphoserine transam 98.7 3E-06 6.4E-11 73.2 17.4 205 33-258 143-363 (365)
343 PLN03032 serine decarboxylase; 98.6 7.7E-06 1.7E-10 70.8 17.1 200 21-254 144-372 (374)
344 PRK12566 glycine dehydrogenase 98.5 4.8E-06 1E-10 78.6 16.8 215 22-258 625-876 (954)
345 TIGR00461 gcvP glycine dehydro 98.5 1.7E-05 3.6E-10 75.4 19.1 226 10-256 594-865 (939)
346 TIGR03799 NOD_PanD_pyr putativ 98.5 7.6E-06 1.6E-10 73.8 15.6 151 20-176 244-424 (522)
347 PRK05367 glycine dehydrogenase 98.5 1.3E-05 2.9E-10 76.8 17.9 232 9-257 605-874 (954)
348 COG1103 Archaea-specific pyrid 98.4 1.6E-05 3.6E-10 64.0 14.8 221 21-258 135-380 (382)
349 KOG2862 Alanine-glyoxylate ami 98.4 0.00011 2.5E-09 60.4 19.6 228 10-258 110-382 (385)
350 PLN02880 tyrosine decarboxylas 98.4 2.3E-05 5.1E-10 70.4 17.4 215 20-257 218-483 (490)
351 KOG1401 Acetylornithine aminot 98.4 9.2E-06 2E-10 68.9 13.1 139 23-171 191-352 (433)
352 PRK12462 phosphoserine aminotr 98.3 8E-05 1.7E-09 64.1 17.7 205 33-257 141-361 (364)
353 PLN02590 probable tyrosine dec 98.3 7.8E-05 1.7E-09 67.5 18.3 218 20-256 266-530 (539)
354 TIGR01365 serC_2 phosphoserine 98.3 0.00016 3.4E-09 62.7 18.4 224 9-256 99-371 (374)
355 PRK05367 glycine dehydrogenase 98.2 0.00014 3.1E-09 70.0 18.5 191 35-253 206-437 (954)
356 KOG1358 Serine palmitoyltransf 98.2 2E-05 4.4E-10 66.5 10.5 210 22-257 207-464 (467)
357 PRK15029 arginine decarboxylas 98.1 0.00048 1E-08 64.6 18.3 142 24-172 291-465 (755)
358 KOG1403 Predicted alanine-glyo 98.1 0.00044 9.6E-09 56.7 15.8 178 54-256 237-435 (452)
359 TIGR02617 tnaA_trp_ase tryptop 98.0 0.00022 4.8E-09 62.3 14.6 212 22-258 166-441 (467)
360 PF00202 Aminotran_3: Aminotra 98.0 3E-05 6.5E-10 66.5 8.1 126 33-171 175-316 (339)
361 COG3844 Kynureninase [Amino ac 98.0 0.001 2.2E-08 55.3 16.4 214 22-258 153-402 (407)
362 PRK13578 ornithine decarboxyla 97.9 0.00058 1.3E-08 63.5 16.1 69 36-108 283-370 (720)
363 COG0076 GadB Glutamate decarbo 97.9 0.00051 1.1E-08 61.2 15.0 163 6-173 169-363 (460)
364 COG1921 SelA Selenocysteine sy 97.9 0.00023 5.1E-09 60.9 11.7 136 3-141 120-269 (395)
365 KOG2467 Glycine/serine hydroxy 97.9 0.002 4.2E-08 54.5 16.7 213 23-256 176-424 (477)
366 PLN02263 serine decarboxylase 97.8 0.0051 1.1E-07 54.7 18.8 217 7-256 191-441 (470)
367 PF03841 SelA: L-seryl-tRNA se 97.8 0.00011 2.3E-09 62.5 7.5 144 25-171 126-296 (367)
368 PF01276 OKR_DC_1: Orn/Lys/Arg 97.7 0.0002 4.3E-09 62.5 8.9 137 26-169 154-315 (417)
369 KOG1405 4-aminobutyrate aminot 97.6 0.0018 3.9E-08 54.5 12.9 191 35-257 270-482 (484)
370 PLN02414 glycine dehydrogenase 97.5 0.01 2.2E-07 57.6 18.0 183 46-254 244-465 (993)
371 PF05889 SLA_LP_auto_ag: Solub 97.5 0.0072 1.6E-07 52.0 15.2 219 22-257 138-389 (389)
372 PRK15399 lysine decarboxylase 97.5 0.016 3.5E-07 54.1 17.8 80 25-107 282-381 (713)
373 TIGR00461 gcvP glycine dehydro 97.4 0.02 4.3E-07 55.1 18.6 200 23-253 184-426 (939)
374 KOG1383 Glutamate decarboxylas 97.3 0.026 5.5E-07 49.3 16.1 195 19-239 202-424 (491)
375 COG1982 LdcC Arginine/lysine/o 97.3 0.018 3.9E-07 51.9 15.6 85 22-108 150-247 (557)
376 PRK15400 lysine decarboxylase 97.2 0.02 4.3E-07 53.5 15.9 69 24-95 281-370 (714)
377 COG1932 SerC Phosphoserine ami 97.2 0.036 7.8E-07 47.1 15.3 175 61-257 171-362 (365)
378 PF01212 Beta_elim_lyase: Beta 97.0 9.6E-05 2.1E-09 61.8 -1.0 97 21-120 104-220 (290)
379 COG3033 TnaA Tryptophanase [Am 97.0 0.051 1.1E-06 46.1 14.2 212 22-257 168-443 (471)
380 PF06838 Met_gamma_lyase: Meth 96.4 0.0086 1.9E-07 50.9 6.2 92 22-120 141-250 (403)
381 PF00282 Pyridoxal_deC: Pyrido 96.4 0.035 7.5E-07 48.4 10.0 161 7-173 154-356 (373)
382 PF02347 GDC-P: Glycine cleava 96.4 0.056 1.2E-06 47.6 11.2 192 33-252 195-429 (429)
383 PRK12566 glycine dehydrogenase 96.3 0.37 8.1E-06 46.6 16.7 203 21-253 194-439 (954)
384 COG0403 GcvP Glycine cleavage 95.7 1.4 2.9E-05 38.6 18.2 206 24-256 199-448 (450)
385 KOG0629 Glutamate decarboxylas 95.0 0.37 8E-06 42.0 10.5 229 22-255 234-506 (510)
386 COG4100 Cystathionine beta-lya 92.9 0.55 1.2E-05 39.1 7.2 86 22-115 152-256 (416)
387 KOG0628 Aromatic-L-amino-acid/ 92.2 7.9 0.00017 34.4 16.5 68 187-256 396-469 (511)
388 COG1003 GcvP Glycine cleavage 87.6 1.4 3E-05 38.7 5.4 102 11-115 174-293 (496)
389 TIGR03811 tyr_de_CO2_Ent tyros 83.6 15 0.00032 34.4 10.4 151 20-171 257-475 (608)
390 KOG2790 Phosphoserine aminotra 78.3 39 0.00085 28.3 10.9 203 34-258 147-368 (370)
391 PF06153 DUF970: Protein of un 54.7 24 0.00052 24.9 3.8 53 206-258 12-66 (109)
392 COG4821 Uncharacterized protei 43.0 44 0.00096 26.4 4.0 37 33-69 103-140 (243)
393 cd04915 ACT_AK-Ectoine_2 ACT d 40.8 89 0.0019 19.4 5.1 46 208-256 19-64 (66)
394 KOG3843 Predicted serine hydro 37.8 52 0.0011 27.3 3.8 114 53-172 180-301 (432)
395 cd04920 ACT_AKiii-DAPDC_2 ACT 37.4 99 0.0021 18.9 4.6 44 208-256 18-61 (63)
396 cd00330 phosphagen_kinases Pho 35.4 2.4E+02 0.0051 23.0 7.3 63 197-259 163-234 (236)
397 cd07930 bacterial_phosphagen_k 35.1 2.4E+02 0.0053 22.8 7.7 63 197-259 156-229 (232)
398 cd04918 ACT_AK1-AT_2 ACT domai 34.2 1.1E+02 0.0025 18.7 4.6 46 208-256 18-63 (65)
399 cd04922 ACT_AKi-HSDH-ThrA_2 AC 31.5 1.2E+02 0.0026 18.2 4.7 47 207-256 18-64 (66)
400 cd04924 ACT_AK-Arch_2 ACT doma 30.3 1.3E+02 0.0028 18.1 4.7 47 208-257 19-65 (66)
401 cd04891 ACT_AK-LysC-DapG-like_ 29.4 1.2E+02 0.0026 17.5 4.8 45 208-252 16-60 (61)
402 cd04937 ACT_AKi-DapG-BS_2 ACT 27.9 1.5E+02 0.0032 18.1 4.6 45 207-256 18-62 (64)
403 PF06462 Hyd_WA: Propeller; I 27.2 26 0.00056 18.5 0.4 11 42-52 18-28 (32)
404 COG1560 HtrB Lauroyl/myristoyl 25.0 4E+02 0.0087 22.7 7.3 60 199-258 215-280 (308)
405 COG5319 Uncharacterized protei 24.9 2.8E+02 0.006 20.2 6.9 23 206-229 117-139 (142)
406 cd07931 eukaryotic_phosphagen_ 24.6 3E+02 0.0066 23.8 6.5 63 197-259 265-336 (338)
407 PF00217 ATP-gua_Ptrans: ATP:g 24.2 2.9E+02 0.0062 22.5 6.1 63 197-259 169-240 (243)
408 PRK06545 prephenate dehydrogen 24.0 4.2E+02 0.0092 22.9 7.5 58 196-254 291-353 (359)
409 cd07932 arginine_kinase_like P 23.8 3.4E+02 0.0074 23.6 6.7 63 197-259 276-347 (350)
410 COG0816 Predicted endonuclease 23.5 53 0.0011 24.4 1.6 45 23-67 40-96 (141)
411 PF13710 ACT_5: ACT domain; PD 22.9 1.7E+02 0.0036 18.1 3.6 49 208-256 7-58 (63)
412 PRK14420 acylphosphatase; Prov 22.3 2.3E+02 0.005 18.9 4.5 45 207-254 18-62 (91)
413 cd00716 creatine_kinase_like P 22.2 3.4E+02 0.0073 23.7 6.3 63 197-259 278-348 (357)
414 cd04913 ACT_AKii-LysC-BS-like_ 21.7 2E+02 0.0044 17.5 5.8 48 208-255 17-64 (75)
415 COG1023 Gnd Predicted 6-phosph 21.4 1.2E+02 0.0027 24.9 3.3 83 34-119 58-149 (300)
416 KOG2470 Similar to IMP-GMP spe 20.8 3E+02 0.0065 24.0 5.6 17 97-116 367-383 (510)
417 cd04881 ACT_HSDH-Hom ACT_HSDH_ 20.8 2.2E+02 0.0047 17.5 5.9 49 207-255 14-66 (79)
418 PRK05601 DNA polymerase III su 20.7 62 0.0013 28.3 1.6 35 33-69 329-363 (377)
419 COG2518 Pcm Protein-L-isoaspar 20.6 2E+02 0.0042 23.0 4.3 68 155-223 101-168 (209)
420 PF13840 ACT_7: ACT domain ; P 20.1 2.3E+02 0.005 17.5 4.1 42 207-254 24-65 (65)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=313.30 Aligned_cols=240 Identities=21% Similarity=0.282 Sum_probs=212.0
Q ss_pred CCCcccchhhhhhccCcc---------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVD---------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~---------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~v 63 (259)
+|+||.|.....+.|+++ .+|.+|++.|++.+++++|+|++++||||||.+++ ++|+++|++|
T Consensus 120 ~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~i 199 (393)
T COG0436 120 DPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIII 199 (393)
T ss_pred CCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEE
Confidence 699999999999998874 16899999999999999999999999999999993 8999999999
Q ss_pred Eeeccc----cCC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 64 IYDHAY----FWP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 64 i~De~y----~~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
|.||+| |.. .+.++. ...+++|.+.||||.|+++|||+||++++++++++.+...+.....|++.+.|.++.
T Consensus 200 i~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~ 279 (393)
T COG0436 200 ISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAI 279 (393)
T ss_pred EEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHH
Confidence 999999 443 233333 235789999999999999999999999996689999998888889999999999999
Q ss_pred HHHHHHHhcCC--cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHH
Q 024997 136 KLLKVVLEDGG--NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDC 210 (259)
Q Consensus 136 ~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~ 210 (259)
.+|+. . +.+.++.++.+++|++.+.+.|+++++ +.+.. |+|++|+|++++.. +.+++
T Consensus 280 ~aL~~-----~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g-------------~~~~~~p~Ga~Y~~~~i~~~~d~~~f~ 341 (393)
T COG0436 280 AALNG-----PQSDEVVEEMREEYRERRDLLVEALNEIGG-------------LSVVKPPEGAFYLFPKIPELLDSEEFA 341 (393)
T ss_pred HHhcC-----ccchHHHHHHHHHHHHHHHHHHHHHHhcCC-------------eeeccCCCeeEEEEeecCCCCCHHHHH
Confidence 99994 3 357888889999999999999998775 55556 88999999999863 57999
Q ss_pred HHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 211 YGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.++|+++||++.||+.|+. +.+++|+|++.+.++++++++++.+++..
T Consensus 342 ~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 342 KKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAE 391 (393)
T ss_pred HHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999995 67999999999889999999999998764
No 2
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=284.97 Aligned_cols=238 Identities=16% Similarity=0.223 Sum_probs=201.2
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. +|.+|++.|++.+.+++++++++|||||||.+++ ++|+++|++||+
T Consensus 146 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~ 225 (413)
T PLN00175 146 APFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFT 225 (413)
T ss_pred CCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEE
Confidence 6999999999999988752 3678888999998888999999999999999983 788999999999
Q ss_pred eccc----cCCCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 66 DHAY----FWPHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 66 De~y----~~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
||+| |.+...+ +....+++|+++||||.|+++|+|+||++++ +++++.+.........+++.+.|.++..+|
T Consensus 226 De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l 304 (413)
T PLN00175 226 DEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATATPMQWAAVAAL 304 (413)
T ss_pred ecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 9999 2222222 2234578999999999999999999999999 699999998887777899999999999999
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C--chHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E--EDKDCYGIL 214 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~ll 214 (259)
+. .+.++++.++.++++++.+.+.|+..+ +.+..|++++|+|+++.. . +.+++..++
T Consensus 305 ~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll 365 (413)
T PLN00175 305 RA-----PESYYEELKRDYSAKKDILVEGLKEVG--------------FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLI 365 (413)
T ss_pred hC-----CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCeeEEEEEeccccCCCCHHHHHHHHH
Confidence 73 456889999999999999999998754 455688999999999742 2 356777788
Q ss_pred HHcCeeeecCCcccC----CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 215 KAAKIIGREGKKFRA----EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~----~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++||.+.||..|+. +.+++||+++.+++++++++++|++++++
T Consensus 366 ~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 366 EEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLKR 413 (413)
T ss_pred HhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHhC
Confidence 888999999999863 35799999988999999999999998864
No 3
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-39 Score=282.95 Aligned_cols=234 Identities=20% Similarity=0.311 Sum_probs=196.4
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 124 ~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI 203 (399)
T PRK07681 124 DPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVV 203 (399)
T ss_pred CCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEE
Confidence 5999999999999998762 3567888888888778999999999999999983 78899999999
Q ss_pred eeccc--c--CC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F--WP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| | .. ...++ ....+++|+++||||.||++|+|+||++++ +++++.+.........+++.+.|.++..
T Consensus 204 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~~~ 282 (399)
T PRK07681 204 HDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-EEIVRALTQFKSNTDYGVFLPIQKAACA 282 (399)
T ss_pred EeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHH
Confidence 99999 2 22 12222 223467999999999999999999999998 7999999988876678899999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGIL 214 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll 214 (259)
+++. ...++++.++.++++++.+.+.|+.++ +.+..|.+|+|+|++++.. +.++...++
T Consensus 283 ~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~ 343 (399)
T PRK07681 283 ALRN-----GAAFCEKNRGIYQERRDTLVDGFRTFG--------------WNVDKPAGSMFVWAEIPKGWTSLSFAYALM 343 (399)
T ss_pred HHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCeeeEEEEECCCCCCHHHHHHHHH
Confidence 9983 456888889999999999999998753 4445788999999999753 356677777
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHH
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
+++||.++||..|+. +++++|||++.+++++++++++|++
T Consensus 344 ~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 344 DRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred HhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 779999999999985 4689999998888999999999988
No 4
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-39 Score=281.72 Aligned_cols=239 Identities=18% Similarity=0.197 Sum_probs=197.9
Q ss_pred CCCcccchhhhhhccCccc-----------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY-----------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|+.|...++..|.++. +|++|++.|++.+++++++++++|||||||.+++ ++|+++|+
T Consensus 133 ~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~ 212 (405)
T PRK06207 133 QPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGA 212 (405)
T ss_pred CCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 5999999999999887652 4678889999988878899999999999999993 77899999
Q ss_pred EEEeeccc--c--CC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHH
Q 024997 62 KSIYDHAY--F--WP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLR 133 (259)
Q Consensus 62 ~vi~De~y--~--~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 133 (259)
+||+||+| | .. ...++ ....+++++++||||+|+++|+|+||++++ +++++++.........+.+.+.|.+
T Consensus 213 ~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l~~~~~~~~~~~~~~~~~~~q~a 291 (405)
T PRK06207 213 TVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAIIDRMEKLQAIVSLRAAGYSQAV 291 (405)
T ss_pred EEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHHHHHHHHHHhHhccCCCHHHHHH
Confidence 99999999 2 22 22222 224578999999999999999999999999 7999999988877778888999999
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--c-hHHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--E-DKDC 210 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 210 (259)
+..++++ ...++++.++.++++++.+.+.|+.+++ +.+..|++|+|+|++++.. + .++.
T Consensus 292 ~~~~l~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~p~gg~fl~~~l~~~~~~~~~~~ 353 (405)
T PRK06207 292 LRTWFSE-----PDGWMKDRIARHQAIRDDLLRVLRGVEG-------------VFVRAPQAGSYLFPRLPRLAVSLHDFV 353 (405)
T ss_pred HHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceecCCCeeEEEEEeCcccCCCHHHHH
Confidence 9999973 3456777888888889999888876532 4556788999999999752 3 4556
Q ss_pred HHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 211 YGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
..+++++||.++||+.|+. .++++|||++.+.++++++++||.+++++
T Consensus 354 ~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 354 KILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIER 402 (405)
T ss_pred HHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 6666678999999999974 46899999998889999999999998764
No 5
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=3.6e-39 Score=280.75 Aligned_cols=236 Identities=16% Similarity=0.198 Sum_probs=188.6
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 123 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii 202 (388)
T PRK07366 123 DPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLV 202 (388)
T ss_pred CCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEE
Confidence 6999999999999988763 3556666777766667899999999999999993 68899999999
Q ss_pred eeccc--c--CCC--CCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 65 YDHAY--F--WPH--FAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 65 ~De~y--~--~~~--~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
+||+| | .+. ..++. ...+++|+++||||+||++|+|+||++++ +++++++.........+.++..|.++.
T Consensus 203 ~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~li~~l~~~~~~~~~~~~~~~~~~a~ 281 (388)
T PRK07366 203 HDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN-AQLIQALRQVKAVVDFNQYRGILNGAI 281 (388)
T ss_pred EecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC-HHHHHHHHHHHhhcccCCCHHHHHHHH
Confidence 99999 3 221 22222 12356899999999999999999999998 799999998877655555444444455
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----chHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----EDKDCY 211 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 211 (259)
..+.. .++++++.++.++++++.+.+.|+.++ +.+..|++|+|+|++++.. +.++..
T Consensus 282 ~~l~~-----~~~~l~~~~~~~~~~r~~l~~~L~~~~--------------~~~~~p~~g~f~~~~~~~~~~~~~~~~~~ 342 (388)
T PRK07366 282 AALTG-----PQATVQQTVQIFRQRRDAFINALHQIG--------------WPVPLPEATMYVWAKLPEPWQGNSVEFCT 342 (388)
T ss_pred HHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCeeEEEEEECCcccCCCHHHHHH
Confidence 55542 457899999999999999999998753 4445789999999999752 345566
Q ss_pred HHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 212 GILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.+++++||.++||+.|+. +.+++||+++.+++++++++++|++++
T Consensus 343 ~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 343 QLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred HHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 777889999999999975 368999999889999999999999864
No 6
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.8e-39 Score=277.87 Aligned_cols=236 Identities=18% Similarity=0.273 Sum_probs=197.0
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|++|...++..|..+ .+|.+|++.|++.++++++++++++||||||.+++ ++|+++|++||
T Consensus 120 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii 199 (384)
T PRK06348 120 EPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFII 199 (384)
T ss_pred CCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEE
Confidence 599999999999988754 24668889999988888899999999999999983 77899999999
Q ss_pred eeccc--c--CCCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y--~--~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+||+| | .....+ +.+..+++|+++||||++|++|+|+||++++ +++++.+.........+++++.|.++..+
T Consensus 200 ~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 278 (384)
T PRK06348 200 SDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP-DYIIETAKIINEGICFSAPTISQRAAIYA 278 (384)
T ss_pred EecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecC-HHHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 99999 2 222222 2233678999999999999999999999999 69999999888777788999999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C-chHHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E-EDKDCYGIL 214 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ll 214 (259)
+.. .+.++.+.++.++++++.+.+.|+.+++ +.+..|++|+|+|++++. . +.++...++
T Consensus 279 l~~-----~~~~~~~~~~~~~~r~~~~~~~L~~~~~-------------~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~ 340 (384)
T PRK06348 279 LKH-----RDTIVPLIKEEFQKRLEYAYKRIESIPN-------------LSLHPPKGSIYAFINIKKTGLSSVEFCEKLL 340 (384)
T ss_pred HhC-----cHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceeccCCeeEEEEEecccCCCCHHHHHHHHH
Confidence 873 5677888899999999999999986542 445688999999999974 2 345666677
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+++||.++||+.|+. +.+++|||++.+++++++++++|+++
T Consensus 341 ~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 341 KEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred HhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 788999999999985 46899999988899999999999864
No 7
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1e-38 Score=276.18 Aligned_cols=238 Identities=16% Similarity=0.242 Sum_probs=199.7
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++ .+|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 111 ~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii 190 (373)
T PRK07324 111 YPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVL 190 (373)
T ss_pred CCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 599999999999998765 23667888998888888999999999999999983 77899999999
Q ss_pred eeccc--c--CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
+||+| + .....++.+..+++|+++||||.||++|+|+||++++ +++++.+.+.....+.+++.+.|.++..+++.
T Consensus 191 ~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~ 269 (373)
T PRK07324 191 SDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEH 269 (373)
T ss_pred EEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcC
Confidence 99999 2 2222333345568999999999999999999999998 79999999988877788899999999888872
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcC
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAK 218 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~g 218 (259)
.+.++.+.++.++++++.+.+.|+..++ +.+..|.+|+|.|+.++.. +.+++.++++++|
T Consensus 270 -----~~~~l~~~~~~~~~~~~~l~~~l~~~~~-------------~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~g 331 (373)
T PRK07324 270 -----RDAILERNRKIVRTNLAILDEWVAKEPR-------------VSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETG 331 (373)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 4567888889999999999998886542 5566889999888887642 4567788888899
Q ss_pred eeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 219 IIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 219 i~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
|.++||+.|+. ++++|||++.+++++++++++|.+++.+
T Consensus 332 v~v~pg~~F~~-~~~iRis~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 332 VLLVPGNRFDL-EGHVRIGYCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEECccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99999999986 4799999988999999999999998864
No 8
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=8.5e-39 Score=277.54 Aligned_cols=238 Identities=17% Similarity=0.211 Sum_probs=198.8
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.... .|.+|+++|++.+.++++++++++||||||.+++ ++|+++|+++|
T Consensus 112 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii 191 (378)
T PRK07682 112 EPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVL 191 (378)
T ss_pred CCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEE
Confidence 5999999999998887641 4678889999988888999999999999999983 78999999999
Q ss_pred eeccc--c--CCCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y--~--~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+||+| | .+...+ +.+..+++++++||||.||++|+|+||++++ +++++++.+.......+++.+.|.++.++
T Consensus 192 ~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~i~~l~~~~~~~~~~~~~~~q~a~~~~ 270 (378)
T PRK07682 192 SDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP-VYFSEAMLKIHQYSMMCAPTMAQFAALEA 270 (378)
T ss_pred EehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC-HHHHHHHHHHHHhhccCCCHHHHHHHHHH
Confidence 99999 2 222222 2234578999999999999999999999999 79999998877666678899999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C-chHHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E-EDKDCYGIL 214 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ll 214 (259)
++. .+.++.+.++.++++++.+.+.|++++ +.+..|++++|+|+.+.. . +.++...++
T Consensus 271 l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll 331 (378)
T PRK07682 271 LRA-----GNDDVIRMRDSYRKRRNFFVTSFNEIG--------------LTCHVPGGAFYAFPSISSTGLSSEEFAEQLL 331 (378)
T ss_pred HhC-----ChHHHHHHHHHHHHHHHHHHHHHHHCC--------------CccCCCCeeEEEEEeccCCCCCHHHHHHHHH
Confidence 973 455788889999999999999999764 455678999999998743 2 355666777
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++||.++||..|+. +++++|||++.+.+++++++++|++++++
T Consensus 332 ~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 332 LEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred HhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 788999999999975 46899999988889999999999998864
No 9
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=270.79 Aligned_cols=239 Identities=18% Similarity=0.264 Sum_probs=206.2
Q ss_pred CCCcccchhhhhhccCcc--------------cccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcC
Q 024997 1 MPFYPLYQEQTDYFESVD--------------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~ 58 (259)
+|.|+.|.....+.|.+. ..|.+|++.|+..++++|++|++|+||||||.++ +++|++
T Consensus 124 eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k 203 (420)
T KOG0257|consen 124 EPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKK 203 (420)
T ss_pred cCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 699999999999999876 2478999999999999999999999999999999 389999
Q ss_pred CCcEEEeeccc----cCC----CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 59 PYAKSIYDHAY----FWP----HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 59 ~~~~vi~De~y----~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
+|.+||.||+| |.+ ....+++..++++.++|+||+||++|||+||++++ +.+...+..........++++.
T Consensus 204 ~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp-~~L~~~~~~vh~~~~~~~~Tp~ 282 (420)
T KOG0257|consen 204 HGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP-KHLYSALFPVHQNFVFTCPTPI 282 (420)
T ss_pred CCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech-HHhhhhHHHHhhccccccCcHH
Confidence 99999999999 333 24556788999999999999999999999999997 7999999998888888899999
Q ss_pred HHHHHHHHHHHHh---cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--
Q 024997 131 QLRAFKLLKVVLE---DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-- 205 (259)
Q Consensus 131 q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 205 (259)
|.+.++++..... ...-.++....+.|+++|+.+.+.|.+++ ++.+.|++++|+|++++..
T Consensus 283 q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg--------------~~v~~p~gayyl~adfs~~~~ 348 (420)
T KOG0257|consen 283 QEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELG--------------LKVTGPEGAYYLWADFSLAKS 348 (420)
T ss_pred HHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcC--------------CccccCCCceEEEEecccccc
Confidence 9998888874220 00114566689999999999999999986 7778999999999999811
Q ss_pred ------------chHHHHHHHHHcCeeeecCCcccCC------CCeEEEEeecChhhHHHHHHHHHH
Q 024997 206 ------------EDKDCYGILKAAKIIGREGKKFRAE------ARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 206 ------------~~~~~~~ll~~~gi~~~~g~~f~~~------~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
+..+...++++.|+.+.|++.|+.. .+.+|+++....+.++.++++|++
T Consensus 349 ~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 349 WPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred CCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 3466888999999999999999952 568899998899999999999983
No 10
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.9e-38 Score=274.71 Aligned_cols=234 Identities=19% Similarity=0.258 Sum_probs=195.5
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|..+. +|.+|++++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 122 ~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii 201 (383)
T TIGR03540 122 DPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVC 201 (383)
T ss_pred CCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEE
Confidence 5999999999999887652 3567888888888778999999999999999993 78999999999
Q ss_pred eeccc----cCC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY----FWP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y----~~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| |.+ ...++. ...+++|+++||||.||++|+|+||++++ +++++++.........+++.+.|.++..
T Consensus 202 ~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~ 280 (383)
T TIGR03540 202 HDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-ADLIAGLGKVKTNVDSGVFQAIQYAAIA 280 (383)
T ss_pred EecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-HHHHHHHHHHHHhcccCCChHHHHHHHH
Confidence 99999 222 222222 23467899999999999999999999998 7999999888776667888899999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGIL 214 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll 214 (259)
+++. .+.++++.++.++++++.+.+.|++++ +.+..+.+|+|+|++++.. +.++...++
T Consensus 281 ~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll 341 (383)
T TIGR03540 281 ALNG-----PQDVVKEIRKIYQRRRDLLLEALKKIG--------------IDVEKPKATFYVWVPVPEGYTSAEFAARLL 341 (383)
T ss_pred HHhC-----CHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEecCCCcceEEEEECCCCCCHHHHHHHHH
Confidence 9973 567888899999999999999999764 5566788999999998743 356666777
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHH
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
+++||.++||..|+. +.+++||+++.+++++++++++|++
T Consensus 342 ~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 342 EETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred HHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 789999999999985 4689999998888999999999875
No 11
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=2.1e-38 Score=276.00 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=193.5
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 125 ~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii 204 (389)
T PRK08068 125 DPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVV 204 (389)
T ss_pred CCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEE
Confidence 5999999999999988752 4667788888888778899999999999999993 68899999999
Q ss_pred eeccc--c--CC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F--WP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| | .. ...++ .+..+++++++||||+||++|+|+||++++ +++++.+.+.......+.+++.|.++..
T Consensus 205 ~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~ 283 (389)
T PRK08068 205 HDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGN-ESVIEAINLLQDHLFVSLFGAIQDAAIE 283 (389)
T ss_pred EehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecC-HHHHHHHHHHHhhccCCCChHHHHHHHH
Confidence 99999 3 22 12122 133567899999999999999999999998 7999999988876666777778888888
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c-hHHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E-DKDCYGIL 214 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ll 214 (259)
++.. ...++++.++.++++++.+.+.|+.++ +.+.++.+|+|+|++++.. + .++...++
T Consensus 284 ~l~~-----~~~~~~~~~~~~~~~r~~~~~~L~~~g--------------~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~ 344 (389)
T PRK08068 284 ALLS-----DQSCVAELVARYESRRNAFISACREIG--------------WEVDAPKGSFFAWMPVPKGYTSEQFADLLL 344 (389)
T ss_pred HHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCeeEEEEEECCCCCCHHHHHHHHH
Confidence 8863 457888999999999999999998764 4455788999999999753 3 45566666
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+++||.++||..|+. +.+++||+++.+++++++++++|+++
T Consensus 345 ~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 345 EKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred HhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 668999999999985 46899999988888999999999864
No 12
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.7e-38 Score=277.17 Aligned_cols=235 Identities=14% Similarity=0.197 Sum_probs=193.3
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|..+++..|.++ .+|.+|++.+++.+.++++++++||||||||.+++ ++|+++|++||
T Consensus 124 ~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii 203 (396)
T PRK09147 124 NPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIA 203 (396)
T ss_pred CCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEE
Confidence 599999999999988765 23678888898877778899999999999999993 78899999999
Q ss_pred eeccc--c--CCC---CCCC---C----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 65 YDHAY--F--WPH---FAPI---P----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 65 ~De~y--~--~~~---~~~~---~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
+||+| | ... ...+ . +..+++|+++||||.|+++|+|+||++++ +++++.+.........+++.+.
T Consensus 204 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~ 282 (396)
T PRK09147 204 SDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD-AALLKKFLLYRTYHGCAMPPAV 282 (396)
T ss_pred eeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC-HHHHHHHHHHhhhcccCCCHHH
Confidence 99999 2 221 1111 0 12468999999999999999999999999 6999999887766667889999
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHH
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDC 210 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (259)
|.++...+. .+.++.+.++.++++++.+.+.|+.. +.+..|++|+|+|++++..+.++.
T Consensus 283 q~a~~~~~~------~~~~~~~~~~~~~~~~~~~~~~L~~~---------------~~~~~p~~g~f~~~~~~~~~~~~~ 341 (396)
T PRK09147 283 QAASIAAWN------DEAHVRENRALYREKFDAVTPILAPV---------------LDVQLPDAGFYLWAKVPGDDTEFA 341 (396)
T ss_pred HHHHHHHhc------chhHHHHHHHHHHHHHHHHHHHHHHh---------------cCCCCCCeeEEEEEECCCCHHHHH
Confidence 998877775 34688889999999999999998853 123478899999999973345667
Q ss_pred HHHHHHcCeeeecCCcccC-------CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 211 YGILKAAKIIGREGKKFRA-------EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~-------~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
..+++++||.+.||..|+. +.+++||+++.+++++++++++|++++.
T Consensus 342 ~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 342 RRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred HHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 7777789999999998862 2579999998889999999999999874
No 13
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-38 Score=276.21 Aligned_cols=238 Identities=20% Similarity=0.239 Sum_probs=193.5
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhh----hcccC---CCCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANL----WGNAS---SDTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~----l~~~~---~~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|+.|..+++..|.++. .|++|++. +++.+ .+++++++++|||||||.+++ ++|+
T Consensus 126 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~ 205 (403)
T PRK08636 126 DPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAK 205 (403)
T ss_pred CCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHH
Confidence 6999999999999988762 25677664 45555 257899999999999999993 7899
Q ss_pred CCCcEEEeeccc--c--CC-CCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHH
Q 024997 58 GPYAKSIYDHAY--F--WP-HFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRE 129 (259)
Q Consensus 58 ~~~~~vi~De~y--~--~~-~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (259)
++|++||+||+| | .+ ...+ +....+++++++||||.||++|+|+||++++ +++++.+.+.......+++++
T Consensus 206 ~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~-~~li~~~~~~~~~~~~~~~~~ 284 (403)
T PRK08636 206 KERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN-KKLVGALKKIKSWLDYGMFTP 284 (403)
T ss_pred HcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCC-HHHHHHHHHHHHHhcccCChH
Confidence 999999999999 2 22 1222 2223457888999999999999999999998 799999988877656778888
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---- 205 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 205 (259)
.|.++..+++ ..+.++++.++.++++++.+.+.|+..+ +.+..|.+|+|+|++++..
T Consensus 285 ~q~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~p~~g~~~~~~l~~~~~~~ 345 (403)
T PRK08636 285 IQVAATIALD-----GDQSCVEEIRETYRKRRDVLIESFANAG--------------WELQKPRASMFVWAKIPEPARHL 345 (403)
T ss_pred HHHHHHHHHh-----CcHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCcceEEEEECCCccCCC
Confidence 9998877765 2467888899999999999999998753 4456789999999999752
Q ss_pred -chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 -EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 -~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+++..+++++||.++||..|+. +.+++||+++.+.+++++++++|+++++.
T Consensus 346 ~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 346 GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 246666778889999999999985 36899999988899999999999998863
No 14
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.8e-38 Score=279.73 Aligned_cols=238 Identities=16% Similarity=0.166 Sum_probs=192.9
Q ss_pred CCCcccchhhhhhccCcccc-----cccChhhhcccCCCCceEEEEc-CCCCCChhhHH--------HhhcCC-CcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDYK-----FEGEANLWGNASSDTHLVEFVT-APNNPDGQMNK--------AVLKGP-YAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~-----~~~d~~~l~~~~~~~~~~i~i~-~p~NPtG~~~~--------~la~~~-~~~vi~ 65 (259)
+|+|+.|...++..|.++.. .++|++.|++.+++++++++++ |||||||.+++ ++|+++ +++||+
T Consensus 172 ~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~ 251 (431)
T PRK15481 172 DPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVII 251 (431)
T ss_pred CCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEe
Confidence 69999999999999987633 2567788888886678877776 99999999993 678888 999999
Q ss_pred eccc--c--CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 66 DHAY--F--WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 66 De~y--~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
||+| | .+....+....+++++++||||+|+ +|+|+||++++ +++++.+.........+++.+.|.++..+|++
T Consensus 252 De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~- 328 (431)
T PRK15481 252 DDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASD-SATSARLRLRLNSGTQWVSHLLQDLVYACLTD- 328 (431)
T ss_pred cCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCC-HHHHHHHHHHHhccccCCCHHHHHHHHHHHhC-
Confidence 9999 3 2222222234468999999999999 99999999999 69999998766655567899999999999984
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
+..+.++.+.++.++++++.+.+.|+..+ +.+..|++|+|+|++++..+.++. +.|.++||.+
T Consensus 329 --~~~~~~l~~~~~~~~~~r~~~~~~L~~~~--------------~~~~~p~gg~f~~~~l~~~~~~~~-~~l~~~gV~v 391 (431)
T PRK15481 329 --PEYQARLAQARLFYAQRRQKLARALQQYG--------------IAIPSPGDGLNLWLPLDTDSQATA-LTLAKSGWLV 391 (431)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CccccCCCeEEEEEECCCCHHHHH-HHHHHCCcEE
Confidence 22345688899999999999999998753 444578999999999975334444 4455789999
Q ss_pred ecCCcccCC--CCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 222 REGKKFRAE--ARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 222 ~~g~~f~~~--~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+||+.|+.+ .+++|||++. +++++++++++|++++++
T Consensus 392 ~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~~ 431 (431)
T PRK15481 392 REGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALNR 431 (431)
T ss_pred ecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhcC
Confidence 999999642 4689999987 889999999999998864
No 15
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=274.29 Aligned_cols=238 Identities=18% Similarity=0.250 Sum_probs=197.2
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++ .+|.+|++.|++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 123 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li 202 (387)
T PRK08960 123 DPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLV 202 (387)
T ss_pred CCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEE
Confidence 699999999999888764 13678888999888888888899999999999983 67899999999
Q ss_pred eeccc--c--CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
+||+| | .....++....+++++++||||.||++|+|+||++++ +++++.+.........+++.+.|.++..++++
T Consensus 203 ~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 281 (387)
T PRK08960 203 VDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAP-PAAVPELEKLAQNLYISASTPAQHAALACFEP 281 (387)
T ss_pred EEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 99999 2 2222233344568999999999999999999999999 69999999888777788899999999888873
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccce-eeCCCCCeeEEEecCC--Cc-hHHHHHHHHH
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFK-KIRPPSPAYAWVKCER--EE-DKDCYGILKA 216 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~-~~~~~~ll~~ 216 (259)
..+.++.+.++.++++++.+.+.|+.++ +. +..|.+|+|+|++++. .+ .++...++++
T Consensus 282 ----~~~~~l~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~ 343 (387)
T PRK08960 282 ----ETLAILEARRAEFARRRDFLLPALRELG--------------FGIAVEPQGAFYLYADISAFGGDAFAFCRHFLET 343 (387)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHh
Confidence 2457888899999999999999998754 22 2367899999999975 23 4556677778
Q ss_pred cCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 217 AKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 217 ~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+||.++||+.|+. +.+++||+++.+.+++++++++|++++.
T Consensus 344 ~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 344 EHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred CCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999999999975 3579999999888999999999998764
No 16
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.3e-38 Score=274.23 Aligned_cols=233 Identities=12% Similarity=0.153 Sum_probs=192.8
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.+.. +|.+|++.|++.+++++++++++|||||||.+++ ++|+++|+++|+
T Consensus 121 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~ 200 (384)
T PRK12414 121 EPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILS 200 (384)
T ss_pred CCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEE
Confidence 5999999999998887652 4668889999988888999999999999999872 778999999999
Q ss_pred eccc----cCC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 66 DHAY----FWP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 66 De~y----~~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
||+| |.. ...++. ...+++++++||||.||++|+|+||++++ +++++.+.........+++.+.|.++..+
T Consensus 201 De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~q~a~~~~ 279 (384)
T PRK12414 201 DEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP-AELMDEIRKVHQFMVFSADTPMQHAFAEA 279 (384)
T ss_pred hhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC-HHHHHHHHHHHhheecCCCcHHHHHHHHH
Confidence 9999 222 222222 33568999999999999999999999999 69999999888767788999999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----CchHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----EEDKDCYGI 213 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l 213 (259)
+++ . .+..+.++.++++++.+.+.|++.+ +.+.++.+|+|+|++++. .+.+++.++
T Consensus 280 l~~-----~-~~~~~~~~~~~~~r~~l~~~L~~~g--------------~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 339 (384)
T PRK12414 280 LAE-----P-ASYLGLGAFYQRKRDLLARELAGSR--------------FELLPSEGSFFMLARFRHFSDESDSDFVLRL 339 (384)
T ss_pred hcC-----C-hHHHHHHHHHHHHHHHHHHHHHhCC--------------CeecCCCcceEEEEcccccCCCCHHHHHHHH
Confidence 873 2 2344578889999999999998753 455688999999998864 245777788
Q ss_pred HHHcCeeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHH
Q 024997 214 LKAAKIIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
++++||.+.||+.|+. +.+++||+++.+++++++++++|.+
T Consensus 340 l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 340 IRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred HHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 8889999999999963 2579999999899999999999975
No 17
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.7e-38 Score=278.85 Aligned_cols=240 Identities=18% Similarity=0.216 Sum_probs=192.7
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++ ..|++|+++|++.+++++++++++|||||||.+++ ++|+++|++||
T Consensus 162 ~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI 241 (462)
T PLN02187 162 RPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVI 241 (462)
T ss_pred CCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEE
Confidence 599999999999888765 35788999999988888899999999999999983 78899999999
Q ss_pred eeccc----cCC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecC-HH---HHHHHHHhhhhhcC--CCCHHHH
Q 024997 65 YDHAY----FWP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKD-EA---VYQRMSAYISLNTM--GVSRECQ 131 (259)
Q Consensus 65 ~De~y----~~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~---~~~~~~~~~~~~~~--~~~~~~q 131 (259)
+||+| |.+ ...++. ....++++++||||.|+++|||+||+++++ +. +++.+......... +++.+.|
T Consensus 242 ~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 321 (462)
T PLN02187 242 SDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQ 321 (462)
T ss_pred EeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHH
Confidence 99999 322 222332 122469999999999999999999999853 23 34566665554333 5689999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccce-eeCCCCCeeEEEecCC------
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFK-KIRPPSPAYAWVKCER------ 204 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------ 204 (259)
.++.++++. ..+.++++.++.++++++.+.+.|++++. .. ...|++|+|+|++++.
T Consensus 322 ~a~~~~L~~----~~~~~l~~~~~~l~~~r~~l~~~L~~~~~-------------~~~~~~P~gg~fl~~~l~~~~~~~~ 384 (462)
T PLN02187 322 AALPAILEK----ADKNFFAKKNKILKHNVDLVCDRLKDIPC-------------VVCPKKPESCTYLLTKLELSLMDNI 384 (462)
T ss_pred HHHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------CcCCCCCCEeEEEEeecChhhCCCC
Confidence 999999973 24578999999999999999999997652 11 2367889999998752
Q ss_pred -CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 -EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 -~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+++..+++++||.++||+.|+. ++++||+++.+++.++++++||.+++++
T Consensus 385 ~~~~~~~~~ll~~~gV~v~pG~~fg~-~~~iRis~~~~~e~l~~al~rL~~~l~~ 438 (462)
T PLN02187 385 KDDIDFCVKLAREENLVFLPGDALGL-KNWMRITIGVEAHMLEDALERLKGFCTR 438 (462)
T ss_pred CCHHHHHHHHHhhCCEEEECccccCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 1346677888899999999999974 5899999988999999999999999863
No 18
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-38 Score=273.65 Aligned_cols=234 Identities=18% Similarity=0.233 Sum_probs=193.6
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 124 ~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii 203 (385)
T PRK09276 124 DPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVC 203 (385)
T ss_pred CCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Confidence 5999999999999887652 3667888888888778999999999999999993 77899999999
Q ss_pred eeccc--c--CC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F--WP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| | .. ...++. ...+++|+++||||.||++|+|+||++++ +++++.+.+.......+++.+.|.++..
T Consensus 204 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~ 282 (385)
T PRK09276 204 HDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN-ADLIAGLGKVKSNVDSGVFQAIQEAGIA 282 (385)
T ss_pred EecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC-HHHHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 99999 2 21 122222 23467899999999999999999999999 7999999987776667788889999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGIL 214 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll 214 (259)
+++. .+.++++.++.++++++.+.+.|++++ +.+..+.+|+|+|++++.. +.++..+++
T Consensus 283 ~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll 343 (385)
T PRK09276 283 ALNG-----PQEVVEELRKIYQERRDILVEGLRKLG--------------LEVEPPKATFYVWAPVPKGYTSAEFATLLL 343 (385)
T ss_pred HHcC-----cHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CcccCCCcceEEEEECCCCCCHHHHHHHHH
Confidence 9873 567888899999999999999998753 4455788999999999753 345667777
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHH
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
+++||.++||..|+. +++++|||++.+++++.+++++|.+
T Consensus 344 ~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 344 DKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred HhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 788999999999975 3689999998888999999999875
No 19
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-38 Score=282.09 Aligned_cols=238 Identities=16% Similarity=0.235 Sum_probs=188.0
Q ss_pred CCCcccchhhhhhccCcc----------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------Hhhc--CCC
Q 024997 1 MPFYPLYQEQTDYFESVD----------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLK--GPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~----------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~--~~~ 60 (259)
+|+|++|...+++.|... .+|.+|.++|++++++++++++++|||||||.+++ ++|+ ++|
T Consensus 197 ~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~ 276 (527)
T PRK09275 197 TPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPD 276 (527)
T ss_pred CCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCC
Confidence 699999999988875322 24889999999988999999999999999999983 6784 469
Q ss_pred cEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHH----HHHHH------------------
Q 024997 61 AKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEA----VYQRM------------------ 115 (259)
Q Consensus 61 ~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~----~~~~~------------------ 115 (259)
++||+||+| |...+.++. ...+++|+++||||.||++|||+||+++++.. +++.+
T Consensus 277 l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~ 356 (527)
T PRK09275 277 LMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTD 356 (527)
T ss_pred cEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCC
Confidence 999999999 432222322 24578999999999999999999999999522 33322
Q ss_pred --------------HHhhhhhcCCCCHHHHHHHH-----HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 116 --------------SAYISLNTMGVSRECQLRAF-----KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 116 --------------~~~~~~~~~~~~~~~q~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
+......+.|.++++|.+++ ++++ ..+.+..+.++.+++|++.+.+.|. ..
T Consensus 357 p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~-----~~~~~~~~~~~~~~~Rr~~l~~~Lg-~~---- 426 (527)
T PRK09275 357 PEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD-----EEDAYKKAMKDIIRRRYKALYEGLG-LP---- 426 (527)
T ss_pred cchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh-----CchHHHHHHHHHHHHHHHHHHHHcC-CC----
Confidence 45555677899999999732 3344 2556788899999999998877772 11
Q ss_pred ccccccccccceeeCCCCCeeEEEecCCC------------------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 177 QEIAPQYCTYFKKIRPPSPAYAWVKCERE------------------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
+...+|.+++|+|+++... +.+++.++++++||.+.||..|+.+++++|+|+
T Consensus 427 ----------~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~ 496 (527)
T PRK09275 427 ----------EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSL 496 (527)
T ss_pred ----------CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEE
Confidence 2234789999999998531 357788999999999999999997678999999
Q ss_pred ec-ChhhHHHHHHHHHHHhhh
Q 024997 239 LK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+. +++++.++.+||++++.+
T Consensus 497 a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 497 ANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred ecCCHHHHHHHHHHHHHHHHH
Confidence 96 889999999999998753
No 20
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=270.73 Aligned_cols=240 Identities=15% Similarity=0.190 Sum_probs=198.1
Q ss_pred CCCcccchhhhhhccCcc------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYFESVD------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~D 66 (259)
+|+|+.|...++..|.++ ..|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|+|
T Consensus 120 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~D 199 (389)
T PRK05957 120 TPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISD 199 (389)
T ss_pred CCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEe
Confidence 599999999888888765 24678999999999888999999999999999883 7899999999999
Q ss_pred ccc--c--CC-CCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 67 HAY--F--WP-HFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 67 e~y--~--~~-~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
|+| | .. ...+ +.+..+++|+++||||.||++|+|+||++++ +++++++.........+++.+.|.++..++
T Consensus 200 e~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 278 (389)
T PRK05957 200 EAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP-IHLLEAIKKIQDTILICPPVVSQYAALGAL 278 (389)
T ss_pred ccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHH
Confidence 999 3 21 1112 2234568999999999999999999999999 699999998887666788889999999999
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKA 216 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~ 216 (259)
+. ...++++.++.++++++.+.+.|+.++++ +.+.++++|+|+|++++.. +.+++..++++
T Consensus 279 ~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~~------------~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~ 341 (389)
T PRK05957 279 QV-----GKSYCQQHLPEIAQVRQILLKSLGQLQDR------------CTLHPANGAFYCFLKVNTDLNDFELVKQLIRE 341 (389)
T ss_pred hC-----ChHHHHHHHHHHHHHHHHHHHHHHhcCCC------------ccccCCCeeEEEEEeCCCCCChHHHHHHHHHH
Confidence 73 45678888899999999999999876431 2345788999999998642 34677777778
Q ss_pred cCeeeecCCcccCC-CCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 217 AKIIGREGKKFRAE-ARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ~gi~~~~g~~f~~~-~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+||.++||+.|+.+ .+++|||++. +++++++++++|.+.+++
T Consensus 342 ~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 342 YRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred CCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99999999999753 5799999986 889999999999988764
No 21
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.4e-37 Score=271.23 Aligned_cols=234 Identities=15% Similarity=0.212 Sum_probs=191.4
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|.+++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 123 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii 202 (393)
T TIGR03538 123 NPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIA 202 (393)
T ss_pred CCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEE
Confidence 5999999999998887652 3677888888887778899999999999999993 78899999999
Q ss_pred eeccc--c--CC--CCCCC----C----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 65 YDHAY--F--WP--HFAPI----P----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 65 ~De~y--~--~~--~~~~~----~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
+||+| | .. ...+. . ...+++|+++||||.|+++|+|+||++++ +++++.+.++......+++.+.
T Consensus 203 ~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~-~~l~~~~~~~~~~~~~~~~~~~ 281 (393)
T TIGR03538 203 SDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD-AEILKAFLRYRTYHGCAMPIPT 281 (393)
T ss_pred ECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC-HHHHHHHHHHHHhhccCcCHHH
Confidence 99999 2 21 11111 1 13468999999999999999999999999 7999999888776667889999
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHH
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDC 210 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (259)
|.++...+. .++++.+.++.++++++.+.+.|+.+ +.+..|.+|+|+|++++..+.++.
T Consensus 282 q~~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~L~~~---------------~~~~~p~gg~f~~~~~~~~~~~~~ 340 (393)
T TIGR03538 282 QLASIAAWN------DEQHVRENRALYREKFAAVLEILGQV---------------LDLELPDAGFYLWPKVPGDDEAFA 340 (393)
T ss_pred HHHHHHHhc------ChHHHHHHHHHHHHHHHHHHHHHHhh---------------CcccCCCeeEEEEEECCCCHHHHH
Confidence 999877775 34678888999999999999999853 123478999999999983245666
Q ss_pred HHHHHHcCeeeecCCcccC-------CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 211 YGILKAAKIIGREGKKFRA-------EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~-------~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..+++++||.+.||+.|+. +.+++|||++.+++++++++++|++++
T Consensus 341 ~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~ 393 (393)
T TIGR03538 341 RALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393 (393)
T ss_pred HHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence 6777789999999998852 357999999888999999999998864
No 22
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-37 Score=272.39 Aligned_cols=240 Identities=15% Similarity=0.164 Sum_probs=188.6
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++ .+|.+|+++|++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 128 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii 207 (409)
T PLN00143 128 RPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVI 207 (409)
T ss_pred CCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEE
Confidence 599999999999988765 24678999999888888889999999999999983 78899999999
Q ss_pred eeccc--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEec-CHHHH------HHHHHhhhhhcCCCCHHH
Q 024997 65 YDHAY--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIK-DEAVY------QRMSAYISLNTMGVSREC 130 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~~------~~~~~~~~~~~~~~~~~~ 130 (259)
+||+| | .. ...++. ...+++|+++||||.|+++|+|+||++++ ++.++ +.+...... ...++.+.
T Consensus 208 ~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 286 (409)
T PLN00143 208 ADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFI 286 (409)
T ss_pred EEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchH
Confidence 99999 2 22 122222 33457999999999999999999999984 23443 333333322 23457899
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC------
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER------ 204 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 204 (259)
|.++.++++. ..+.++++.++.++++++.+.+.|++++.. .....|++|+|+|++++.
T Consensus 287 q~a~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~------------~~~~~p~gg~f~w~~l~~~~~~~~ 350 (409)
T PLN00143 287 QAAIPEILEK----TTEDFFSKTINILRAALAFCYDKLKEIPCI------------MCPQKAEGAFFALVKLNLLLLEDI 350 (409)
T ss_pred HHHHHHHHhc----ChHHHHHHHHHHHHHHHHHHHHHHhcCCCC------------CCCCCCCeeEEEEEecchhhcCCC
Confidence 9999999873 135688889999999999999988865421 112368899999999963
Q ss_pred -CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 -EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 -~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+++..+++++||.++||..|+. ++++||+++.+.++++++++||++++++
T Consensus 351 ~~~~~~~~~ll~~~gV~v~pg~~f~~-~~~iRi~~~~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 351 EDDMEFCLKLAKEESLIILPGVTVGL-KNWLRITFAVEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 1346677888899999999999975 5899999998899999999999998863
No 23
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=273.11 Aligned_cols=239 Identities=17% Similarity=0.237 Sum_probs=192.6
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...+...|..+ .+|.+|++.|++.+++++++++++|||||||.+++ ++|+++|++||
T Consensus 148 ~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii 227 (430)
T PLN00145 148 RPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVI 227 (430)
T ss_pred CCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 599999999998888765 24788999999988888999999999999999993 67899999999
Q ss_pred eeccc----cCC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEec-CHHHHH------HHHHhhhhhcCCCCHHH
Q 024997 65 YDHAY----FWP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIK-DEAVYQ------RMSAYISLNTMGVSREC 130 (259)
Q Consensus 65 ~De~y----~~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~~~------~~~~~~~~~~~~~~~~~ 130 (259)
+||+| |.. .+.++. ...+++|+++||||.|++||||+||++++ ++.+++ .+..+.. ...+++.+.
T Consensus 228 ~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 306 (430)
T PLN00145 228 ADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFV 306 (430)
T ss_pred EeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHH
Confidence 99999 221 223322 23467999999999999999999999984 234433 3333332 344678899
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccee-eCCCCCeeEEEecCC-----
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKK-IRPPSPAYAWVKCER----- 204 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----- 204 (259)
|.++..+++. ..++++++.++.++++++.+.+.|+.+++ +.+ ..|++++|+|++++.
T Consensus 307 Q~a~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~L~~~~g-------------~~~~~~P~ga~y~~v~l~~~~~~~ 369 (430)
T PLN00145 307 QGAIPQIIAN----TKEEFFTKTLGLLKETADICYEKIKEIKC-------------ITCPHKPEGSMFVMVKLDLSCLSG 369 (430)
T ss_pred HHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------CCCCcCCCeeeEEEeccChhhcCC
Confidence 9999999984 23578899999999999999999987643 333 368999999999863
Q ss_pred --CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 --EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 --~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+++..+++++||.+.||..|+. ++++|||++.+.+.+++++++|++++.+
T Consensus 370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~-~~~lRis~~~~~~~l~~al~rl~~~~~~ 424 (430)
T PLN00145 370 IKDDMDFCCKLAKEESVVVLPGSALGM-KNWLRITFAIDPPSLEDGLERLKSFCLR 424 (430)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 1346788899999999999999985 5899999988889999999999999864
No 24
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.1e-37 Score=270.77 Aligned_cols=237 Identities=19% Similarity=0.205 Sum_probs=192.5
Q ss_pred CCCcccchhhhhhccCcccccccC-----hhhhcccC---CCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGE-----ANLWGNAS---SDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d-----~~~l~~~~---~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++..+..+ .+.+++.+ .++++++++++||||||.+++ ++|+++|++||
T Consensus 123 ~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii 202 (405)
T PRK09148 123 NPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIIL 202 (405)
T ss_pred CCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEE
Confidence 699999999999998876443322 23344443 367899999999999999993 78899999999
Q ss_pred eeccc----cCC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY----FWP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y----~~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| |.. ...++ +...+++++++||||.+|++|+|+||++++ +++++.+.+.......+++.+.|.++..
T Consensus 203 ~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~-~~~i~~l~~~~~~~~~~~~~~~q~~~~~ 281 (405)
T PRK09148 203 SDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGN-ERLIAALTRVKSYLDYGAFTPIQVAATA 281 (405)
T ss_pred EeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCC-HHHHHHHHHHHHHhccCCChHHHHHHHH
Confidence 99999 222 12222 223457889999999999999999999998 7999999988877778889999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----chHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-----EDKDCY 211 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 211 (259)
+++. .+.++++.++.++++++.+.+.|+.++ +.+..|++|+|+|++++.. +.++..
T Consensus 282 ~L~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~--------------~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~ 342 (405)
T PRK09148 282 ALNG-----PQDCIAEMRELYKKRRDVLVESFGRAG--------------WDIPPPAASMFAWAPIPEAFRHLGSLEFSK 342 (405)
T ss_pred HHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CccCCCCeeEEEEEECCCccCCCCHHHHHH
Confidence 9973 457888899999999999999998754 4445788999999998752 246667
Q ss_pred HHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 212 GILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++++||.++||..|+. +++++||+++.+.+++.+++++|.++++
T Consensus 343 ~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 343 LLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLS 389 (405)
T ss_pred HHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 778789999999999975 3689999998888999999999999875
No 25
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-37 Score=271.12 Aligned_cols=238 Identities=17% Similarity=0.216 Sum_probs=197.9
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCC-CcEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGP-YAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~-~~~v 63 (259)
+|+|+.|.......+... .+|.+|++.|++.+.++++++++++||||||.+++ ++|+++ |+++
T Consensus 124 ~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~i 203 (402)
T PRK06107 124 APYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLV 203 (402)
T ss_pred cCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEE
Confidence 589999998888776543 23667888899988888899899999999999983 778887 9999
Q ss_pred Eeeccc----cCC-CCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHH
Q 024997 64 IYDHAY----FWP-HFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRA 134 (259)
Q Consensus 64 i~De~y----~~~-~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 134 (259)
|+||+| |.. ...++. +..+++++++||||.||++|+|+||++++ +++++.+.........+++.+.|.++
T Consensus 204 I~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~ 282 (402)
T PRK06107 204 LTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP-ADLIAAINKLQSQSSSCPSSISQAAA 282 (402)
T ss_pred EEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC-HHHHHHHHHHHHhcccCCChHHHHHH
Confidence 999999 222 222222 23468999999999999999999999999 79999999988877789999999999
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----------
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---------- 204 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 204 (259)
..+++. .+.++.+.++.++++++.+.+.|+++++ +.+..|++|+|+|++++.
T Consensus 283 ~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~g-------------~~~~~p~gg~~~~~~~~~~~~~~~~~~~ 344 (402)
T PRK06107 283 AAALNG-----DQSFVTESVAVYKQRRDYALALLNAIPG-------------LSCLVPDGAFYLYVNCAGLIGKTTPEGK 344 (402)
T ss_pred HHHhcC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCC-------------CcccCCCcceEEeeeccccccccccccc
Confidence 999973 4678899999999999999999987543 445688999999998731
Q ss_pred ---CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 ---EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 ---~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+++.++++++||.++||+.|+. .+++|||++.+++++++++++|.+++.+
T Consensus 345 ~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-~~~iRis~~~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 345 VLETDQDVVLYLLDSAGVAVVQGTAYGL-SPYFRLSIATSLETLEEACARIERAVAA 400 (402)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 1245677888889999999999976 4899999999999999999999998754
No 26
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=2.6e-37 Score=268.87 Aligned_cols=238 Identities=19% Similarity=0.235 Sum_probs=197.3
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. +|.+|.+.+++.++++++++++++||||||.+++ ++|+++|+++|+
T Consensus 120 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~ 199 (387)
T PRK07683 120 APIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLS 199 (387)
T ss_pred CCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 5999999999999988762 3556677888888788899999999999999972 788999999999
Q ss_pred eccc--c--CCCCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 66 DHAY--F--WPHFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 66 De~y--~--~~~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
||+| | .+...++. +..+++++++||||.||++|+|+||++++ +++++++.........+++.+.|.++..++
T Consensus 200 De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l 278 (387)
T PRK07683 200 DEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAP-SYLAKHILKVHQYNVTCASSISQYAALEAL 278 (387)
T ss_pred ecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcC-HHHHHHHHHHHHhccCCCChHHHHHHHHHH
Confidence 9999 2 22222222 34568999999999999999999999999 799999988766555677889999999999
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C-chHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E-EDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ll~ 215 (259)
++ .+.++++.++.++++++.+.+.|+..+ +.+..+++|+|+|+.++. . +.+++.++++
T Consensus 279 ~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 339 (387)
T PRK07683 279 TA-----GKDDAKMMRHQYKKRRDYVYNRLISMG--------------LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVE 339 (387)
T ss_pred hC-----ChHHHHHHHHHHHHHHHHHHHHHHHcC--------------CcccCCCeeEEEEEecccCCCCHHHHHHHHHH
Confidence 73 456788889999999999999998653 455688999999998864 2 3466677888
Q ss_pred HcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 216 AAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++||.++||+.|+. +++++||+++.+++++++++++|.+++.+
T Consensus 340 ~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 340 EAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred hCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 89999999999975 46899999988999999999999998764
No 27
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.1e-37 Score=274.51 Aligned_cols=241 Identities=17% Similarity=0.165 Sum_probs=186.0
Q ss_pred CCCcccchhhh-hhccCcc--------cccccChhhhcccCC--CCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQT-DYFESVD--------YKFEGEANLWGNASS--DTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~-~~~g~~~--------~~~~~d~~~l~~~~~--~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|+.|.... ...|... .+|.+|+++|++.+. +++++++++|||||||.+++ ++|+++|+
T Consensus 126 ~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~ 205 (433)
T PRK06855 126 SPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDL 205 (433)
T ss_pred CCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 59999987653 3345432 347889999999885 46788899999999999993 78899999
Q ss_pred EEEeeccc----cCC-CCCCCCC--CCCCeEEEeccccccCCCcceEEEEEecC----HH---HHHHHHHhhhhhcCCCC
Q 024997 62 KSIYDHAY----FWP-HFAPIPA--PADEELMIFTISKLTGHAGSRFGWAVIKD----EA---VYQRMSAYISLNTMGVS 127 (259)
Q Consensus 62 ~vi~De~y----~~~-~~~~~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~----~~---~~~~~~~~~~~~~~~~~ 127 (259)
+||+||+| |.. ...++.. ...++|+++||||.|+++|+|+||+++++ +. +++.+..... ...+++
T Consensus 206 ~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 284 (433)
T PRK06855 206 FIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM-IEVCST 284 (433)
T ss_pred EEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCC
Confidence 99999999 222 2223221 12368999999999999999999999842 22 3333333322 235678
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-- 205 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 205 (259)
.+.|.++..++++ +..++++++.++.++++++.+.+.|+.+++ +.+..|++|+|+|++++..
T Consensus 285 ~~~Q~a~~~~l~~---~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~-------------~~~~~p~gg~~~w~~l~~~~~ 348 (433)
T PRK06855 285 TLPQMAIPRIMSH---PEYKNYLKERNKRYEKRSNIAYEKLKDVPG-------------LKVNRTNGAFYMTVVFEDGVL 348 (433)
T ss_pred hHHHHHHHHhhcC---CcHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------eeccCCCeeEEEeeccccccc
Confidence 9999999999973 123678999999999999999999986532 4456899999999999742
Q ss_pred ---------------------------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 206 ---------------------------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 206 ---------------------------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
+.+++..+++++||.+.||+.|+....++|||++. +.+++++++++|.++++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~~ 428 (433)
T PRK06855 349 NNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKIE 428 (433)
T ss_pred cccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHHH
Confidence 34667778889999999999998655679999987 89999999999999886
Q ss_pred h
Q 024997 258 K 258 (259)
Q Consensus 258 ~ 258 (259)
+
T Consensus 429 ~ 429 (433)
T PRK06855 429 E 429 (433)
T ss_pred H
Confidence 4
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-37 Score=270.75 Aligned_cols=235 Identities=18% Similarity=0.228 Sum_probs=194.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...+...|.++. +|.+|+++|++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 128 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI 207 (394)
T PRK05942 128 SPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLV 207 (394)
T ss_pred CCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEE
Confidence 6999999998888887642 3568888998888889999999999999999983 78999999999
Q ss_pred eeccc--c--CC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F--WP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| | .+ ...++ ....+++|+++||||.||++|+|+||++++ +++++.+.........+++.+.|.++..
T Consensus 208 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~ 286 (394)
T PRK05942 208 HDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHIIQGLRTLKTNLDYGIFSALQKAAET 286 (394)
T ss_pred EeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHHHHHHHHHHhhcccCCCHHHHHHHHH
Confidence 99999 2 21 12222 223456899999999999999999999998 7999999988776667889999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGIL 214 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll 214 (259)
+++. .+.++.+.++.++++++.+.+.|+.++ +.+..+++|+|+|++++.. +.++..+++
T Consensus 287 ~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l 347 (394)
T PRK05942 287 ALQL-----PDSYLQQVQERYRTRRDFLIQGLGELG--------------WNIPPTKATMYLWVPCPVGMGSTDFALNVL 347 (394)
T ss_pred HHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCeeeEEEEECCCCCCHHHHHHHHH
Confidence 9972 456888899999999999999998653 4455788999999999753 356666788
Q ss_pred HHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 215 KAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+++||.++||+.|+. +.+++|+|++.+.+.+.+++++|.++
T Consensus 348 ~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 348 QKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred HHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 889999999999975 46899999987888899999998764
No 29
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2e-37 Score=269.79 Aligned_cols=238 Identities=16% Similarity=0.185 Sum_probs=197.4
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. .|.+|++.|++.+++++++++++|||||||.+++ ++|+++|+++|+
T Consensus 118 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~ 197 (387)
T PRK08912 118 QPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAIC 197 (387)
T ss_pred CCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEE
Confidence 5999999999999888652 4678889999988888899999999999999983 788999999999
Q ss_pred eccc----cCC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 66 DHAY----FWP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 66 De~y----~~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
||+| |.. ...++ .+..+++++++||||.||++|+|+||++++ +++++.+........++++++.|.++..+
T Consensus 198 De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~~~~~~ 276 (387)
T PRK08912 198 DEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLRVLAKAHQFLTFTTPPNLQAAVAYG 276 (387)
T ss_pred hhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC-HHHHHHHHHHHhhccccCChHHHHHHHHH
Confidence 9999 222 22222 233578999999999999999999999999 69999998877766677788889988888
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----C-chHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----E-EDKDCYG 212 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~ 212 (259)
+.. .++++++.++.++++++.+.+.|+.++ +.+.++++++|+|++++. . +.+++..
T Consensus 277 l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~ 337 (387)
T PRK08912 277 LGK-----PDDYFEGMRADLARSRDRLAAGLRRIG--------------FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRR 337 (387)
T ss_pred HhC-----CHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CcccCCCcceEEEecccccCCCCCHHHHHHH
Confidence 862 456888899999999999999998764 445578899999999864 2 3456667
Q ss_pred HHHHcCeeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKIIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++++||.+.||..|+. ..+++||+++.+++++++++++|.+++.+
T Consensus 338 l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 338 LVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred HHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 77788999999999863 36899999998889999999999998875
No 30
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=253.33 Aligned_cols=239 Identities=19% Similarity=0.260 Sum_probs=207.1
Q ss_pred CCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 2 PFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
|+||.|...+...|.++ .+|++|++.++.+++++|.+++++|||||+|.+++ ++|++++++||.
T Consensus 158 PGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIa 237 (447)
T KOG0259|consen 158 PGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIA 237 (447)
T ss_pred CCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEe
Confidence 99999999999888876 46899999999999999999999999999999993 889999999999
Q ss_pred eccc----c-CCCCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCH-------HHHHHHHHhhhhhcCCCCHHHH
Q 024997 66 DHAY----F-WPHFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDE-------AVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 66 De~y----~-~~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~q 131 (259)
||+| | +..+.++. ...-.++.++|+||.|=.||||+||++..|. .+++.+.+... .+.+++++.|
T Consensus 238 DEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ 316 (447)
T KOG0259|consen 238 DEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQ 316 (447)
T ss_pred hhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHh-ccCCccHhHH
Confidence 9999 5 34455554 2334589999999999999999999998752 34455665554 4688999999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC------
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------ 205 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 205 (259)
.|...+|+. ..+++++...+.++.+.+.-.+.|++++++++ ...|+|.+|+|+++.-.
T Consensus 317 ~AlP~IL~k----Tp~efF~k~~~~lk~na~l~y~~Lk~IP~l~c------------p~kPeg~mylmv~l~~s~~~~~~ 380 (447)
T KOG0259|consen 317 GALPDILEK----TPEEFFDKKLSFLKSNADLCYSRLKDIPCLTC------------PVKPEGCMYLMVKLNLSLFPDIE 380 (447)
T ss_pred HHhHHHHHh----ChHHHHHHHHHHHHhhHHHHHHHHhcCCCccc------------CcCCCcceEEEeccchhhhcccc
Confidence 999999987 47889999999999999999999999987443 34899999999987643
Q ss_pred -chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 -EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 -~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+++.++.+++.+.+.||..|+.+ +|+|++++.+.+.++++++||++++.+
T Consensus 381 dD~dFc~kL~~Eesv~~LPG~af~~~-nw~Ri~i~~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 381 DDVDFCQKLAREESVICLPGQAFGLK-NWLRIVITVEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred ccHHHHHHHhhhcceEEeccccccCC-CeEEEEEccChHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999986 999999988999999999999999875
No 31
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-37 Score=267.98 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=197.7
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~v 63 (259)
+|+|+.|...++..|.++. +|.+|++.|++.++++++++++++||||||.+++ ++|+++|+++
T Consensus 115 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~l 194 (382)
T PRK06108 115 TPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWI 194 (382)
T ss_pred CCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEE
Confidence 5999999999998887652 2557888999888888899999999999999872 7889999999
Q ss_pred Eeeccc--c--C-C-CCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHH
Q 024997 64 IYDHAY--F--W-P-HFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRA 134 (259)
Q Consensus 64 i~De~y--~--~-~-~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 134 (259)
|+||+| | . . ...+ +....+++++++||||.||++|+|+||++++ +++++.+.........+++.+.|.++
T Consensus 195 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~a~ 273 (382)
T PRK06108 195 VADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAP-PALGQVLEKLIEYNTSCVAQFVQRAA 273 (382)
T ss_pred EEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCC-HHHHHHHHHHHHhcccCCChHHHHHH
Confidence 999999 2 2 1 1111 2123468999999999999999999999999 79999998877656678899999999
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYG 212 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 212 (259)
..+++. .+.++++.+++++++++.+.+.|+.+++ +.+..|++|+|+|++++.. +.++...
T Consensus 274 ~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~p~~g~~~~~~l~~~~~~~~~~~~ 335 (382)
T PRK06108 274 VAALDE-----GEDFVAELVARLRRSRDHLVDALRALPG-------------VEVAKPDGAMYAFFRIPGVTDSLALAKR 335 (382)
T ss_pred HHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CcccCCCeeEEEEEeCCCCCCHHHHHHH
Confidence 999973 4567888899999999999999987643 4455788999999998753 3456677
Q ss_pred HHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++++||.++||..|+. +.+++|||++.+++++++++++|++++++
T Consensus 336 ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 336 LVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLAR 382 (382)
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhC
Confidence 77889999999999974 46899999988999999999999998864
No 32
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.9e-37 Score=268.84 Aligned_cols=237 Identities=20% Similarity=0.264 Sum_probs=194.1
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.+...++..|.++ ..|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 121 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 200 (388)
T PRK07337 121 DPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTI 200 (388)
T ss_pred CCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEE
Confidence 599999999888887654 24678889999988888899999999999999983 77889999999
Q ss_pred eeccc--c--CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
+||+| | .+...+.....+++++++||||.||++|+|+||++++ +++++.+.+.......+++.+.|.++..+++.
T Consensus 201 ~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~-~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 279 (388)
T PRK07337 201 VDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVP-EALVGTFEKLAQNLFICASALAQHAALACFEP 279 (388)
T ss_pred EeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecC-HHHHHHHHHHHHHhccCCChHHHHHHHHHhcc
Confidence 99999 2 2222222234567999999999999999999999999 69999999888776778899999998888863
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccee-eCCCCCeeEEEecCC------C-chHHHHH
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKK-IRPPSPAYAWVKCER------E-EDKDCYG 212 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~-~~~~~~~ 212 (259)
....+..+.++.++++++.+.+.|+.++ +.. ..|++|+|+|++++. . +.+++..
T Consensus 280 ----~~~~~~~~~~~~~~~~r~~~~~~L~~~~--------------~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ 341 (388)
T PRK07337 280 ----DTLAIYERRRAEFKRRRDFIVPALESLG--------------FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQA 341 (388)
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHHHhcC--------------CccccCCCeeEEEEEecccccCCCCCCHHHHHHH
Confidence 1234567788899999999999998754 222 367899999999974 2 3456667
Q ss_pred HHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 213 ILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+++++||.+.||+.|+. +.+++|||++.+.+++++++++|.+++
T Consensus 342 ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 342 MLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred HHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 78889999999999975 368999999888899999999999875
No 33
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1e-37 Score=271.38 Aligned_cols=234 Identities=18% Similarity=0.231 Sum_probs=195.6
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. +|.+|++++++.++++++++++++||||||.++ .++|+++|+++|+
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~ 201 (386)
T PRK09082 122 DPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLS 201 (386)
T ss_pred CCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEE
Confidence 5999999999999887752 457788899998888899999999999999886 2889999999999
Q ss_pred eccc----cCC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 66 DHAY----FWP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 66 De~y----~~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
||+| |.. ...++ .+..+++++++||||.||++|+|+||++++ +++++.+.+.......+++.+.|.++..+
T Consensus 202 De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~ 280 (386)
T PRK09082 202 DEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSAEFRKVHQYNTFTVNTPAQLALADY 280 (386)
T ss_pred ehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHHHHHHHHhhhcCCCChHHHHHHHHH
Confidence 9999 222 12222 234578999999999999999999999999 69999999988766788999999999888
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---C-chHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---E-EDKDCYGI 213 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~l 213 (259)
++. .+.++++.++.++++++.+.+.|+..+ +.+.++++|+|+|++++. . +.++...+
T Consensus 281 l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 341 (386)
T PRK09082 281 LRA-----EPEHYLELPAFYQAKRDRFRAALANSR--------------FKLLPCEGTYFQLVDYSAISDLDDVEFCQWL 341 (386)
T ss_pred HhC-----ChHHHHHHHHHHHHHHHHHHHHHHhCC--------------CcccCCCeeEEEEEeccccCCCCHHHHHHHH
Confidence 872 456788889999999999999998643 455678999999999863 2 34566667
Q ss_pred HHHcCeeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHH
Q 024997 214 LKAAKIIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
++++||.+.||+.|+. +.+++|||++.+++++++++++|++
T Consensus 342 ~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 342 TREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred HHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 8899999999998863 3679999999889999999999975
No 34
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=3.3e-37 Score=269.88 Aligned_cols=240 Identities=17% Similarity=0.236 Sum_probs=194.6
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++ .+|.+|++.|++.++++++++++++||||||.++ .++|+++|++||
T Consensus 127 ~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii 206 (409)
T PLN02656 127 RPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVI 206 (409)
T ss_pred CCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 599999999888888764 2467888999988888889999999999999997 278899999999
Q ss_pred eeccc--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecC-------HHHHHHHHHhhhhhcCCCCHHH
Q 024997 65 YDHAY--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKD-------EAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
+||+| | .+ ...++. +..+++|+++||||.|+++|+|+||+++++ +++++++...... ..+++.+.
T Consensus 207 ~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~ 285 (409)
T PLN02656 207 ADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFI 285 (409)
T ss_pred EehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHH
Confidence 99999 2 22 222221 334679999999999999999999999952 5788888876553 35688999
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----- 205 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 205 (259)
|.++..+++. ..+.++++.++.++++++.+.+.|+.++.. .....|++|+|+|++++..
T Consensus 286 q~a~~~~l~~----~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~------------~~~~~p~gg~~~w~~l~~~~~~~~ 349 (409)
T PLN02656 286 QAAVPTILEQ----TDESFFKKTINILKQSSDICCDRIKEIPCI------------TCPHKPEGSMAVMVKLNLSLLEDI 349 (409)
T ss_pred HHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHhhCCCC------------cCCcCCCeEEEEEEecchhhcCCC
Confidence 9999999973 245688999999999999999999875421 1124789999999998521
Q ss_pred --chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 --EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 --~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+++..+++++||.++||+.|+. ++++||+++.+++++++++++|++++++
T Consensus 350 ~~~~~~~~~~l~~~gV~v~pg~~fg~-~~~iRi~~~~~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 350 SDDIDFCFKLAREESVIILPGTAVGL-KNWLRITFAADPSSLEEALGRIKSFYLR 403 (409)
T ss_pred CCHHHHHHHHHHhCCEEEecchhcCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 235677888899999999999975 5899999998999999999999998764
No 35
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.3e-37 Score=274.23 Aligned_cols=239 Identities=21% Similarity=0.261 Sum_probs=188.0
Q ss_pred CCCcccchhhhhh-ccCcc--------cccccChhhhcccCC------CCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDY-FESVD--------YKFEGEANLWGNASS------DTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~-~g~~~--------~~~~~d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|+.|...+.. .|.++ .+|.+|.+.+++.+. .+++++++||||||||.+++ ++|+
T Consensus 142 ~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~ 221 (468)
T PLN02450 142 TPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFIT 221 (468)
T ss_pred CCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHH
Confidence 5999999888874 67654 245667788887763 37888999999999999993 7888
Q ss_pred CCCcEEEeeccc----cCC-CCCCCC-----------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh
Q 024997 58 GPYAKSIYDHAY----FWP-HFAPIP-----------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL 121 (259)
Q Consensus 58 ~~~~~vi~De~y----~~~-~~~~~~-----------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~ 121 (259)
++|++||+||+| |.. .+.++. +..+++++++||||.||++|+|+||++++++.+.+.+.....
T Consensus 222 ~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~- 300 (468)
T PLN02450 222 AKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS- 300 (468)
T ss_pred HCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh-
Confidence 999999999999 221 222211 135789999999999999999999999986456776665533
Q ss_pred hcCCCCHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEE
Q 024997 122 NTMGVSRECQLRAFKLLKVVLEDGG-NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWV 200 (259)
Q Consensus 122 ~~~~~~~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (259)
..+++.+.|.++..+|++. .. +.++++.+++++++++.+.+.|+.++ +.+.++++|+|+|+
T Consensus 301 -~~~~s~~~Q~a~~~~L~~~---~~~~~~l~~~~~~l~~rr~~l~~~L~~~g--------------i~~~~~~~g~flwi 362 (468)
T PLN02450 301 -FGLVSSQTQYLLSALLSDK---KFTKNYLEENQKRLKQRQKKLVSGLEAAG--------------IKCLKSNAGLFCWV 362 (468)
T ss_pred -cCCCCHHHHHHHHHHhCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CcccCCCceEEEEE
Confidence 2457899999999999731 11 13678889999999999999998764 44567899999999
Q ss_pred ecCCC--------chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 201 KCERE--------EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 201 ~~~~~--------~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+++.. ..++...+++++||.+.||+.|+. +++++||+|+. +++++++++++|++++++
T Consensus 363 ~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 363 DMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred EchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 98642 134566778889999999999975 47899999996 899999999999998764
No 36
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=4.7e-37 Score=263.96 Aligned_cols=234 Identities=17% Similarity=0.211 Sum_probs=190.9
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++++++++++++++++++||||||.+++ ++|+++|+++|
T Consensus 94 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii 173 (350)
T TIGR03537 94 TPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILC 173 (350)
T ss_pred CCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEE
Confidence 5999999999999988762 3667888999888888999999999999999883 78899999999
Q ss_pred eeccc--c--CCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
+||+| + .....++. ...+++++++||||.+|++|+|+||++++ +++.+++.........+.+.+.|.++...+.
T Consensus 174 ~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 252 (350)
T TIGR03537 174 SDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD-EKLISFLRKLRANFGVASPDFVQAAAKAAWS 252 (350)
T ss_pred EeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC-HHHHHHHHHHHHhhccCCCHHHHHHHHHHhC
Confidence 99999 2 22222222 23468999999999999999999999988 7999999988776667777788888877776
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcC
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAK 218 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~g 218 (259)
.+.++.+.++.++++++.+.+.|+..+ +.+..+.+|+|+|++++.. +.+.+.+.|.++|
T Consensus 253 ------~~~~~~~~r~~l~~~~~~~~~~l~~~g--------------~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~g 312 (350)
T TIGR03537 253 ------DDNHVLERRKIFKRKRDLFIEFFNKVG--------------LEYLYPDATFYLWVKVPSGIDAKDYALRLLENG 312 (350)
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCeEEEEEEECCCCCCHHHHHHHHHHCC
Confidence 356788889999999999999998753 4455788999999999764 3444445455689
Q ss_pred eeeecCCcccCC-CCeEEEEeecChhhHHHHHHHHHHH
Q 024997 219 IIGREGKKFRAE-ARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 219 i~~~~g~~f~~~-~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
|.++||..|+.. .+++||+++.+++++++++++|+++
T Consensus 313 v~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~~ 350 (350)
T TIGR03537 313 IVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWERV 350 (350)
T ss_pred EEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhcC
Confidence 999999999753 6899999987889999999998763
No 37
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=277.11 Aligned_cols=243 Identities=18% Similarity=0.211 Sum_probs=188.5
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|...++..|.++ .+|.+|+++|++.+++ ++++++++|||||||.+++ ++|++
T Consensus 170 ~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 170 IPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred CCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 599999999999998775 2477888999888753 7888899999999999993 78999
Q ss_pred CCcEEEeeccc----cCC--CCCCCC----CC------CCCeEEEeccccc-cCCCcceEEEEEe---cCHHHHHHHHHh
Q 024997 59 PYAKSIYDHAY----FWP--HFAPIP----AP------ADEELMIFTISKL-TGHAGSRFGWAVI---KDEAVYQRMSAY 118 (259)
Q Consensus 59 ~~~~vi~De~y----~~~--~~~~~~----~~------~~~~i~~~S~SK~-~g~~G~R~G~i~~---~~~~~~~~~~~~ 118 (259)
+|++||+||+| |.. .+.++. .. ..++|+++||||. ++++|||+||+++ + +++++++...
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p-~~li~~l~~~ 328 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP-PEVREQIYKL 328 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC-HHHHHHHHHH
Confidence 99999999999 321 222221 11 1268999999997 5899999999997 6 7999999887
Q ss_pred hhhhcCCCCHHHHHHHHHHHHHHHhc--CCcch---HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC
Q 024997 119 ISLNTMGVSRECQLRAFKLLKVVLED--GGNNI---FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP 193 (259)
Q Consensus 119 ~~~~~~~~~~~~q~~~~~~l~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (259)
.. ...+++.+.|.++..+++....+ ..+.+ +.+.++.++++++.+.+.|+.+++ +.+..|+
T Consensus 329 ~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g-------------~~~~~p~ 394 (481)
T PTZ00377 329 AS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEG-------------VSCQPVE 394 (481)
T ss_pred hh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------cEeecCC
Confidence 64 34578999999999998631100 01113 333444578899999999987643 5667899
Q ss_pred CCeeEEEecCCC--------------chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 194 SPAYAWVKCERE--------------EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 194 ~~~~~~~~~~~~--------------~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+|+|+|++++.. +.+++..+++++||.++||+.|+. +.+++|||++.+.+++++++++|.++++
T Consensus 395 gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~ 474 (481)
T PTZ00377 395 GAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHE 474 (481)
T ss_pred eeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 999999876421 234567888899999999999985 3579999998778899999999999886
Q ss_pred h
Q 024997 258 K 258 (259)
Q Consensus 258 ~ 258 (259)
+
T Consensus 475 ~ 475 (481)
T PTZ00377 475 S 475 (481)
T ss_pred H
Confidence 4
No 38
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=6.3e-37 Score=268.27 Aligned_cols=237 Identities=19% Similarity=0.249 Sum_probs=182.7
Q ss_pred CCCcccchhhhhhccCc-----------ccccccChh-hhcccC-CCCceEEEEcCCCCCChhhHH--------HhhcCC
Q 024997 1 MPFYPLYQEQTDYFESV-----------DYKFEGEAN-LWGNAS-SDTHLVEFVTAPNNPDGQMNK--------AVLKGP 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~-----------~~~~~~d~~-~l~~~~-~~~~~~i~i~~p~NPtG~~~~--------~la~~~ 59 (259)
+|+|+.|..+++..|.. +..+..|.+ .+...+ .++++++++||||||||.+++ ++|+++
T Consensus 129 ~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~ 208 (409)
T PRK07590 129 DPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN 208 (409)
T ss_pred CCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc
Confidence 69999999999999975 444444321 232222 357899999999999999993 788999
Q ss_pred CcEEEeeccc--c--CCC-CCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHH------------HHhh
Q 024997 60 YAKSIYDHAY--F--WPH-FAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRM------------SAYI 119 (259)
Q Consensus 60 ~~~vi~De~y--~--~~~-~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~------------~~~~ 119 (259)
|++||+||+| | ... ..++. ...+++|+++||||+||++|+|+||++++ +++++.+ ....
T Consensus 209 ~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~-~~li~~~~~~~~~~~~~~~~~~~ 287 (409)
T PRK07590 209 GSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP-KELKGKTSDGEGVSLNSLWNRRQ 287 (409)
T ss_pred CeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC-HHHhhhccccchhhhHHHHHHHH
Confidence 9999999999 3 221 12222 23457999999999999999999999999 6888732 1222
Q ss_pred hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEE
Q 024997 120 SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAW 199 (259)
Q Consensus 120 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (259)
.....+++.+.|.++..+++. ..+.++++.++.++++++.+.+.|+.++ +.+..+.+|+|+|
T Consensus 288 ~~~~~~~s~~~q~a~~~~l~~----~~~~~~~~~~~~~~~~r~~l~~~L~~~~--------------~~~~~~~g~~f~w 349 (409)
T PRK07590 288 STKFNGVSYIVQRAAEAVYSP----EGKAQIKELIDYYMENAKIIREGLESAG--------------FEVYGGVNAPYIW 349 (409)
T ss_pred hhcccCcCHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CceecCCcceEEE
Confidence 222246889999999888863 2456888899999999999999998753 4455778999999
Q ss_pred EecCCC--chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 200 VKCERE--EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 200 ~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
++++.. +.++...+++++||.++||+.|+. +.+++||+++.+++++++++++|.+++
T Consensus 350 i~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 350 VKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL 409 (409)
T ss_pred EECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhhC
Confidence 999763 356666777788999999999975 467999998678999999999998764
No 39
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.4e-37 Score=274.94 Aligned_cols=237 Identities=16% Similarity=0.214 Sum_probs=185.1
Q ss_pred CCCcccchhhhhhcc--Ccc--------cc-----cccChhhhcccCCCCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDYFE--SVD--------YK-----FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g--~~~--------~~-----~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|++|..++++.+ .++ .. |.+|.++|++++++++++++++|||||||.+++ ++|+
T Consensus 191 ~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~ 270 (521)
T TIGR03801 191 TPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVA 270 (521)
T ss_pred CCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 599999999988763 332 12 888999999988889999999999999999993 6787
Q ss_pred CC--CcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHH------------H-----
Q 024997 58 GP--YAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQR------------M----- 115 (259)
Q Consensus 58 ~~--~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~------------~----- 115 (259)
++ |++||+||+| |...+.++. ...+++|+++||||.||++|||+||++++++.+.++ +
T Consensus 271 ~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~ 350 (521)
T TIGR03801 271 NDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYS 350 (521)
T ss_pred hcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhc
Confidence 75 9999999999 432333332 245689999999999999999999999984322211 1
Q ss_pred -------------------HHhhhhhcCCCCHHHHH-----HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc
Q 024997 116 -------------------SAYISLNTMGVSRECQL-----RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS 171 (259)
Q Consensus 116 -------------------~~~~~~~~~~~~~~~q~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (259)
+......+.|.+.+.|. ++.++++ ..+.+.++.++.+++|++.+.+.|. +
T Consensus 351 ~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~-----~~~~y~~~~~~~~~~R~~~l~~~Lg-~ 424 (521)
T TIGR03801 351 SLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD-----KENAYKAETKDICRRREKLLFRGLG-L 424 (521)
T ss_pred cccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc-----cchhHHHHHHHHHHHHHHHHHHhcC-C
Confidence 33444556788898887 2334444 2456888899999999999888872 1
Q ss_pred CCCccccccccccccceeeCCCCCeeEEEecCCC------------------chHHHHHHHHHcCeeeecCCcccCCCCe
Q 024997 172 NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------------------EDKDCYGILKAAKIIGREGKKFRAEARF 233 (259)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ll~~~gi~~~~g~~f~~~~~~ 233 (259)
. +...++.+++|+|++++.. +.+++.++++++||.+.||..|+.++++
T Consensus 425 ~--------------~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~ 490 (521)
T TIGR03801 425 P--------------LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWS 490 (521)
T ss_pred C--------------CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCe
Confidence 1 2234688999999999731 3578899999999999999999977789
Q ss_pred EEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 234 VRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 234 ~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
+|+|++. ++++++++.++|++++.
T Consensus 491 vRisla~l~~~~~~~~~~rl~~~~~ 515 (521)
T TIGR03801 491 VRVSLANLNEYDYAEIGRAIRKILD 515 (521)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHHH
Confidence 9999986 88999999999999875
No 40
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=5.2e-37 Score=268.27 Aligned_cols=239 Identities=17% Similarity=0.203 Sum_probs=190.2
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. ++++|++.|++.+++++++++++|||||||.+++ ++|+++|++||
T Consensus 126 ~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii 205 (401)
T TIGR01264 126 RPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPII 205 (401)
T ss_pred CCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 5999999999999887652 3678889998888777899999999999999972 78899999999
Q ss_pred eeccc--c--CC-CCCCCCC--CCCCeEEEeccccccCCCcceEEEEEecCH-----HHHHHHHHhhhhhcCCCCHHHHH
Q 024997 65 YDHAY--F--WP-HFAPIPA--PADEELMIFTISKLTGHAGSRFGWAVIKDE-----AVYQRMSAYISLNTMGVSRECQL 132 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~q~ 132 (259)
+||+| | .. ...++.. ...++|+++||||+|+++|+|+||++++++ ++++.+..... ...+++.+.|.
T Consensus 206 ~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 284 (401)
T TIGR01264 206 ADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQG 284 (401)
T ss_pred EEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHH
Confidence 99999 3 21 2222222 223589999999999999999999998741 34444444432 24668899999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-------C
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-------E 205 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 205 (259)
++..++++ ..++++++.++.++++++.+.+.|+.+++ +.+..|++|+|+|++++. .
T Consensus 285 a~~~~l~~----~~~~~l~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~p~~g~f~~~~~~~~~~~~~~~ 347 (401)
T TIGR01264 285 ALPSILLR----TPQEYFDGTLSVLESNAMLCYGALAAVPG-------------LRPVMPSGAMYMMVGIEMEHFPEFKN 347 (401)
T ss_pred HHHHHHHh----CcHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CcccCCCeeeEEEEEecccccCCCCC
Confidence 99999973 24578899999999999999999987643 344578999999999753 1
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+++..+++++||.++||..|+. ++++|||++.+++++++++++|.+++++
T Consensus 348 ~~~~~~~l~~~~gI~v~pg~~f~~-~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 348 DVEFTERLVAEQSVFCLPGSCFEY-PGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred HHHHHHHHHHhCCEEEeCchhcCC-CCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 345666777789999999999964 5899999988889999999999998864
No 41
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=7e-37 Score=268.17 Aligned_cols=239 Identities=14% Similarity=0.154 Sum_probs=192.3
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. .|++|+++|++.+++++++++++|||||||.+++ ++|+++|++||
T Consensus 135 ~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii 214 (412)
T PTZ00433 135 APGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLI 214 (412)
T ss_pred cCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEE
Confidence 5999999999999988752 3678888998888778899999999999999872 77899999999
Q ss_pred eeccc--c--CC-CCCCCCC--CCCCeEEEeccccccCCCcceEEEEEe--c---CHHHHHHHHHhhhhhcCCCCHHHHH
Q 024997 65 YDHAY--F--WP-HFAPIPA--PADEELMIFTISKLTGHAGSRFGWAVI--K---DEAVYQRMSAYISLNTMGVSRECQL 132 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~--~---~~~~~~~~~~~~~~~~~~~~~~~q~ 132 (259)
+||+| | .. ...++.. ...++++++||||+||++|+|+||+++ | .+++++.+..... ..++++++.|.
T Consensus 215 ~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 293 (412)
T PTZ00433 215 SDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQA 293 (412)
T ss_pred EeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHH
Confidence 99999 2 21 2222222 223589999999999999999999997 2 1467777776544 34678999999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-------C
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-------E 205 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 205 (259)
++..++.+ ..+.++++.++.++++++.+.+.|+.+.+ +.++.|++|+|+|++++. .
T Consensus 294 a~~~~l~~----~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~p~gg~f~~~~l~~~~~~~~~~ 356 (412)
T PTZ00433 294 ALGEALLN----TPQEHLEQIVAKLEEGAMVLYNHIGECIG-------------LSPTMPRGSMFLMSRLDLEKFRDIKS 356 (412)
T ss_pred HHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------CcccCCCeeEEEEEEechhhcCCCCC
Confidence 99999974 24578899999999999999999986432 445678999999998863 1
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+++..+++++||.++||+.|+. .+++||+++.+++++++++++|.+++..
T Consensus 357 ~~~~~~~ll~~~gV~v~pg~~f~~-~~~iRis~~~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 357 DVEFYEKLLEEENVQVLPGEIFHM-PGFTRLTISRPVEVLREAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHhcCEEEeCccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 356777777778999999999975 4899999988888999999999998863
No 42
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-37 Score=267.13 Aligned_cols=234 Identities=21% Similarity=0.271 Sum_probs=192.4
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++++++.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 137 ~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI 216 (410)
T PRK06290 137 VPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVV 216 (410)
T ss_pred CCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEE
Confidence 5999999999999988752 3566788888888778999999999999999993 77899999999
Q ss_pred eeccc--c--CCCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y--~--~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+||+| + .....+ +.+..+++|+++||||.+|++|+|+||++++ +++++.+.........+++.+.|.++..+
T Consensus 217 ~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-~~l~~~l~~~~~~~~~~~~~~~q~aa~~~ 295 (410)
T PRK06290 217 QDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-ELIVKAFATVKDNNDSGQFIAIQKAGIYA 295 (410)
T ss_pred EecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC-HHHHHHHHHHHhccccCCcHHHHHHHHHH
Confidence 99999 2 222222 2234467899999999999999999999999 79999999888776777888999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDK 208 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 208 (259)
+++ ..++.+.++.++++++.+.+.|+.++ +.+.+|++++|+|++++.. +.+
T Consensus 296 l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~ 355 (410)
T PRK06290 296 LDH------PEITEKIREKYSRRLDKLVKILNEVG--------------FKAEMPGGTFYLYVKAPKGTKSGIKFENAEE 355 (410)
T ss_pred hhC------cHHHHHHHHHHHHHHHHHHHHHHhCC--------------CeecCCCeeeEEEEECCCccccCCCCCCHHH
Confidence 872 35788889999999999999998764 4556789999999998742 346
Q ss_pred HHHHHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
+...++++.++.++||..|+ +++||+++. ++++.++.++.|.+.|.+
T Consensus 356 ~~~~Ll~~~~v~~~p~~~~~---~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 356 FSQYLIKEKLISTVPWDDAG---HFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred HHHHHHHhCCEEEECCcccc---CeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 77778877788888987664 799999974 778888899998888764
No 43
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-37 Score=265.30 Aligned_cols=227 Identities=18% Similarity=0.223 Sum_probs=181.5
Q ss_pred CCCcccchhhhhhccCcccc--------cccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYK--------FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++.. |.+|.... .+ +++++++++|||||||.+++ ++|+++|++||
T Consensus 116 ~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii 192 (374)
T PRK05839 116 NPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL-QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILI 192 (374)
T ss_pred CCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh-ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEE
Confidence 59999999999999987643 33433222 12 46889999999999999993 77889999999
Q ss_pred eeccc--c--CCCCCCCC--------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHH
Q 024997 65 YDHAY--F--WPHFAPIP--------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQL 132 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~--------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 132 (259)
+||+| | .....++. ...+++|+++||||.|+++|+|+||++++ +++++++.........+++.+.|.
T Consensus 193 ~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~~~~~~~~~~~~~~~~~~~~~q~ 271 (374)
T PRK05839 193 NDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-ASILKKYKAYRTYLGCASPLPLQK 271 (374)
T ss_pred eccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HHHHHHHHHHHhhcCCCCChHHHH
Confidence 99999 3 11222211 12368999999999999999999999998 799999988876666788999999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYG 212 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (259)
++..++. .+.++++.++.++++++.+.+.|. +. .|++|+|+|++++. +.++..+
T Consensus 272 ~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~l~-----------------~~--~p~gg~fi~~~~~~-~~~~~~~ 325 (374)
T PRK05839 272 AAAVAWL------DDEHAEFFRNIYAKNLKLAREILG-----------------IT--IPPATFYVWLPVDN-DEEFTKK 325 (374)
T ss_pred HHHHHhc------cchHHHHHHHHHHHHHHHHHHhcC-----------------CC--CCCeeEEEEEeCCC-hHHHHHH
Confidence 8887776 356888888999999887776542 22 67899999999974 4677777
Q ss_pred HHHHcCeeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 213 ILKAAKIIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+++++||.++||+.|+. +++++|||++.+.+++++++++|+++++
T Consensus 326 l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 326 LYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred HHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 77779999999998874 3689999998889999999999999875
No 44
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.4e-36 Score=264.61 Aligned_cols=238 Identities=20% Similarity=0.208 Sum_probs=193.8
Q ss_pred CCCcccchhhhhhccCcc-------cccccChhhhcccCC---CCceEEEEcCCCCCChhhHH--------HhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVD-------YKFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~-------~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~ 62 (259)
+|+|+.|...++..|.++ .+|.+|++.|++.+. ++++++++++||||||.+++ ++|+++|++
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ 201 (391)
T PRK07309 122 APAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIF 201 (391)
T ss_pred CCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcE
Confidence 599999999999988765 135678888988874 36889999999999999872 788999999
Q ss_pred EEeeccc--c--CC-CCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 63 SIYDHAY--F--WP-HFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 63 vi~De~y--~--~~-~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+|+||+| | .. ...++. ...+++++++||||.||++|+|+||++++ +++++++.........+++++.|.++..
T Consensus 202 ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 280 (391)
T PRK07309 202 VISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTAQLIKSHQYLVTAATTMAQFAAVE 280 (391)
T ss_pred EEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHHHHHHHHhhcccCCChHHHHHHHH
Confidence 9999999 2 11 222222 23478999999999999999999999999 7999999877655567889999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----chHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----EDKDCYG 212 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 212 (259)
+++. ...+....++.++++++.+.+.|+..+ +.++.|++|+|+|++++.. +.++...
T Consensus 281 ~l~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~ 341 (391)
T PRK07309 281 ALTN-----GKDDALPMKKEYIKRRDYIIEKMTDLG--------------FKIIKPDGAFYIFAKIPAGYNQDSFKFLQD 341 (391)
T ss_pred HHhC-----ChhHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCeeEEEEEECCCCCCCCHHHHHHH
Confidence 9873 334456677889999999999888753 5566889999999998743 2345667
Q ss_pred HHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++++||.++||..|+. +++++||+++.+.+++++++++|++++++
T Consensus 342 l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 342 FARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEE 388 (391)
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 78789999999999975 46899999988889999999999998864
No 45
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.6e-36 Score=267.01 Aligned_cols=239 Identities=18% Similarity=0.265 Sum_probs=188.1
Q ss_pred CCCcccchhhhhh-ccCcc--------cccccChhhhcccCC------CCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDY-FESVD--------YKFEGEANLWGNASS------DTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~-~g~~~--------~~~~~d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|+.|...+.. .|.++ .+|.+|++.+++++. .++++++++|||||||.+++ ++|+
T Consensus 151 ~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~ 230 (447)
T PLN02607 151 TPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVV 230 (447)
T ss_pred CCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHH
Confidence 5999999987764 56544 236678888888773 37889999999999999993 7899
Q ss_pred CCCcEEEeeccc----cC-CCCCCCC---------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc
Q 024997 58 GPYAKSIYDHAY----FW-PHFAPIP---------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT 123 (259)
Q Consensus 58 ~~~~~vi~De~y----~~-~~~~~~~---------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~ 123 (259)
++|+++|+||+| |. +.+.++. +..+++++++||||.||++|+|+||+++.++++++.++.....
T Consensus 231 ~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~-- 308 (447)
T PLN02607 231 RKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF-- 308 (447)
T ss_pred HCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhc--
Confidence 999999999999 32 2232321 1256899999999999999999999998546888877665432
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec
Q 024997 124 MGVSRECQLRAFKLLKVVLEDGG-NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC 202 (259)
Q Consensus 124 ~~~~~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (259)
.++|.+.|.++..+|++. .. +.++.+.+++++++++.+.+.|+..+ +.+..+.+|+|+|+++
T Consensus 309 ~~~s~~~q~~~~~~L~d~---~~~~~~l~~~r~~l~~~~~~~~~~L~~~g--------------i~~~~~~ag~fvw~~L 371 (447)
T PLN02607 309 TLVSSQTQHLLASMLSDE---EFTENYIRTNRERLRKRYEMIVQGLRRAG--------------IECLKGNAGLFCWMNL 371 (447)
T ss_pred CCCCHHHHHHHHHHhCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CCcccCCeeEEEEEEc
Confidence 357889999999998741 11 24667888899999999999998754 4456789999999998
Q ss_pred CCC------c--hHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 203 ERE------E--DKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 203 ~~~------~--~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+.. + .++...+++++||.+.||+.|+. .++|+||+|+. +++.++++++||.+++++
T Consensus 372 ~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 372 SPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred hHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 642 1 23455777778999999999975 47999999997 899999999999998864
No 46
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-36 Score=264.17 Aligned_cols=241 Identities=17% Similarity=0.241 Sum_probs=197.9
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++++++++++++||||||.+++ ++|+++++++|
T Consensus 124 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii 203 (391)
T PRK08361 124 DPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYIL 203 (391)
T ss_pred CCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEE
Confidence 5999999999998887652 3568889999988888899999999999999983 67899999999
Q ss_pred eeccc--c--C-CCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 65 YDHAY--F--W-PHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 65 ~De~y--~--~-~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
+||+| | . ....++. ...+++++++||||.||++|+|+||++++ +++++.+.........+++.+.|.++..++
T Consensus 204 ~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 282 (391)
T PRK08361 204 SDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAP-EQVIKDMIKLHAYIIGNVASFVQIAGIEAL 282 (391)
T ss_pred EEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccC-HHHHHHHHHHHhhhccCCChHHHHHHHHHh
Confidence 99999 2 2 1222222 23468999999999999999999999999 699999888776666788999999999998
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C-chHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E-EDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ll~ 215 (259)
++ +....++.+.++.++++++.+.+.|+.+++ +.+..|++|+|+|++++. . +.++...+++
T Consensus 283 ~~---~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-------------~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~ 346 (391)
T PRK08361 283 RS---KESWKAVEEMRKEYNERRKLVLKRLKEMPH-------------IKVFEPKGAFYVFANIDETGMSSEDFAEWLLE 346 (391)
T ss_pred cC---CcccHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CeecCCCEEEEEEEECCCCCCCHHHHHHHHHH
Confidence 74 122356888899999999999999987643 455688999999999974 2 3456666667
Q ss_pred HcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 216 AAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++||.++||..|+. +.+++||+++.+++++++++++|++++++
T Consensus 347 ~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 347 KARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred hCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 78999999999975 46899999988888999999999998864
No 47
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=4.6e-36 Score=262.07 Aligned_cols=239 Identities=17% Similarity=0.245 Sum_probs=192.7
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|... .+|.+|.+.|++.+++++++++++|||||||.+++ ++|+++|+++|
T Consensus 124 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li 203 (398)
T PRK08363 124 GPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVI 203 (398)
T ss_pred CCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEE
Confidence 599999999998887643 23567888888888888899999999999999872 77899999999
Q ss_pred eeccc----cCCCCCCCC--CCCCCeEEEeccccccCCCcceEEEEEe--cCHHHHHHHHHhhhh---hcCCCCHHHHHH
Q 024997 65 YDHAY----FWPHFAPIP--APADEELMIFTISKLTGHAGSRFGWAVI--KDEAVYQRMSAYISL---NTMGVSRECQLR 133 (259)
Q Consensus 65 ~De~y----~~~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~~~~~~~~~~~---~~~~~~~~~q~~ 133 (259)
+||+| |.+...++. ...+++++++||||.|+++|+|+||+++ + +++++.+...... ...+++.+.|.+
T Consensus 204 ~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~-~~~~~~l~~~~~~~~~~~~~~s~~~q~~ 282 (398)
T PRK08363 204 SDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP-EGKLAEVREAIDKLARIRLCPNTPAQFA 282 (398)
T ss_pred EhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCc-HHHHHHHHHHHHHHhcccccCChHHHHH
Confidence 99999 222222222 2345799999999999999999999998 5 6777776655432 236789999999
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----CchHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----EEDKD 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 209 (259)
+..++.. .++++.+.++.++++++.+.+.|+.+++ +.+..|++|+|+|++++. .+.++
T Consensus 283 ~~~~l~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~p~g~~~~~~~l~~~~~~~~~~~ 344 (398)
T PRK08363 283 AIAGLTG-----PMDYLEEYMKKLKERRDYIYKRLNEIPG-------------ISTTKPQGAFYIFPRIEEGPWKDDKEF 344 (398)
T ss_pred HHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCC-------------CEecCCCeEEEEEEEeccCCCCCHHHH
Confidence 9999872 5678888999999999999999986543 445678999999998864 23566
Q ss_pred HHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.++++++||.++||..|+. +.+++|||++.+++++++++++|++++.+
T Consensus 345 ~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 345 VLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 77888899999999999975 46899999987889999999999998865
No 48
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.1e-36 Score=271.72 Aligned_cols=241 Identities=15% Similarity=0.221 Sum_probs=184.9
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...+++.|.++ .+|.+|+++|++.+++++++++++|||||||.+++ ++|+++|++||
T Consensus 239 ~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii 318 (517)
T PRK13355 239 SPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIF 318 (517)
T ss_pred CCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEE
Confidence 599999999999998865 24788999999999889999999999999999983 78899999999
Q ss_pred eeccc--c--CC-CCCCCCCC--CCCeEEEeccccccCCCcceEEEEEec-CHHH----HHHHHHhhhhhcCCCCHHHHH
Q 024997 65 YDHAY--F--WP-HFAPIPAP--ADEELMIFTISKLTGHAGSRFGWAVIK-DEAV----YQRMSAYISLNTMGVSRECQL 132 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~~~--~~~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~----~~~~~~~~~~~~~~~~~~~q~ 132 (259)
+||+| | .. ...++... ...+++++||||+|+++|||+||++++ ++++ ++.+... .....+++.+.|.
T Consensus 319 ~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~ 397 (517)
T PRK13355 319 SDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQS 397 (517)
T ss_pred EehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHH
Confidence 99999 2 22 22232221 224677899999999999999999954 1344 3334322 2234678899999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC------c
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------E 206 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 206 (259)
++..+|... ...++++.+. +++.++++.+.+.|+++++ +.+..|++++|+|++++.. +
T Consensus 398 a~~~aL~~~--~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g-------------~~~~~p~g~fy~~~~l~~~~~~~~~~ 461 (517)
T PRK13355 398 IVQTALGGH--QSVKDYLVPG-GRVYEQRELVYNALNAIPG-------------ISAVKPKAAFYIFPKIDVKKFNIHDD 461 (517)
T ss_pred HHHHHhcCC--ccHHHHHHHH-HHHHHHHHHHHHHHhcCCC-------------cccCCCCeeeEEEeecCcccCCCCCH
Confidence 999988620 0012344443 3455667888888887643 5567899999999988631 3
Q ss_pred hHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 207 DKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++.++|+++||.++||+.|+. +++++|||++.+++++++++++|.+++++
T Consensus 462 ~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 462 EQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 56788889999999999999974 57899999977999999999999999864
No 49
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2e-36 Score=269.34 Aligned_cols=238 Identities=19% Similarity=0.244 Sum_probs=183.8
Q ss_pred CCCcccchhhhhh-ccCcc--------cccccChhhhcccC------CCCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDY-FESVD--------YKFEGEANLWGNAS------SDTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~-~g~~~--------~~~~~d~~~l~~~~------~~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|+.|...++. .|.++ .+|++|++.+++++ ..++++++++|||||||.+++ ++|+
T Consensus 150 ~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~ 229 (496)
T PLN02376 150 SPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVT 229 (496)
T ss_pred CCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence 5999999987774 67765 24677788886542 247888899999999999993 7889
Q ss_pred CCCcEEEeeccc----cC-CCCCCCC---C-------CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh
Q 024997 58 GPYAKSIYDHAY----FW-PHFAPIP---A-------PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN 122 (259)
Q Consensus 58 ~~~~~vi~De~y----~~-~~~~~~~---~-------~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~ 122 (259)
++|++||+||+| |. +.+.++. . ..+++++++||||.||++|+|+||++++++.+.+.+......
T Consensus 230 ~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~- 308 (496)
T PLN02376 230 RKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSF- 308 (496)
T ss_pred HcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhc-
Confidence 999999999999 32 2233321 1 113577899999999999999999999755676666554432
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDGG-NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
..++.+.|.++..+++.. .. +.++.+.+++++++++.+.+.|++.+ +.+..+.+|+|+|++
T Consensus 309 -~~vs~~~Q~a~~~~L~d~---~~~~~~l~~~r~~l~~r~~~l~~~L~~~g--------------i~~~~~~aG~flwi~ 370 (496)
T PLN02376 309 -GLVSSQTQLMLASMLSDD---QFVDNFLMESSRRLGIRHKVFTTGIKKAD--------------IACLTSNAGLFAWMD 370 (496)
T ss_pred -CCCCHHHHHHHHHHhCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCceEEEEEE
Confidence 458899999999999731 12 34566678889999999999998653 455678999999999
Q ss_pred cCCC---------chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 202 CERE---------EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 202 ~~~~---------~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
++.. +.++...+++++||.+.||+.|+. .++|+||+|+. ++++++++++||++++.
T Consensus 371 l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 371 LRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred chhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 9642 134556677778999999999974 47899999996 88999999999999885
No 50
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=5.1e-36 Score=260.89 Aligned_cols=237 Identities=16% Similarity=0.188 Sum_probs=194.4
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~v 63 (259)
+|+|+.|..+++..|.... +|.+|+++|++.+.++++++++++||||||.+++ ++|+++++++
T Consensus 116 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~l 195 (387)
T PRK07777 116 EPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLV 195 (387)
T ss_pred CCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEE
Confidence 5899999999988887541 3568889999988888899999999999999872 7889999999
Q ss_pred Eeeccc----cCC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 64 IYDHAY----FWP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 64 i~De~y----~~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
|+||+| |.. ...++. +..+++++++||||.||++|+|+||++++ +++++.+.........+.+.+.|.++.
T Consensus 196 i~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~ 274 (387)
T PRK07777 196 ITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP-APLIAAVRAAKQYLTYVGGAPFQPAVA 274 (387)
T ss_pred EEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC-HHHHHHHHHHHhhcccCCCCHHHHHHH
Confidence 999999 212 222222 23568999999999999999999999999 699999988777666778888999888
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----CchHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----EEDKDCY 211 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 211 (259)
.++.. .+.++.+.++.++++++.+.+.|+.++ +.+.++++++|+|++++. .+.+++.
T Consensus 275 ~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 335 (387)
T PRK07777 275 HALDH-----EDAWVAALRDSLQAKRDRLAAGLAEAG--------------FEVHDSAGTYFLCADPRPLGYDDGTEFCR 335 (387)
T ss_pred HHHhC-----CcHHHHHHHHHHHHHHHHHHHHHHhCC--------------CCccCCCcceEEEecccccCCCCHHHHHH
Confidence 88873 467888889999999999999998753 445678899999998752 1356677
Q ss_pred HHHHHcCeeeecCCcccC----CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 212 GILKAAKIIGREGKKFRA----EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~----~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++++||.++||+.|+. +.+++||+++.+++++++++++|+++.-
T Consensus 336 ~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 336 ALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred HHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 777788999999998863 2568999998899999999999998754
No 51
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-36 Score=246.66 Aligned_cols=241 Identities=17% Similarity=0.232 Sum_probs=206.3
Q ss_pred CCCcccchhhhhhccCcc---------cccccChhhhcccCC-CCceEEEEcCCCCCChhhHH--------HhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVD---------YKFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~---------~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~ 62 (259)
.|.|+++..+....|.+. ..|.+|+++|++.+. ++++++++||||||||.++. ++|.+||+.
T Consensus 114 tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~ 193 (388)
T COG1168 114 TPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVR 193 (388)
T ss_pred CCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCE
Confidence 599999999999988876 358999999999985 46799999999999999993 899999999
Q ss_pred EEeeccc----cCC-CCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHH-HhhhhhcCCCCHHHHH
Q 024997 63 SIYDHAY----FWP-HFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMS-AYISLNTMGVSRECQL 132 (259)
Q Consensus 63 vi~De~y----~~~-~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~-~~~~~~~~~~~~~~q~ 132 (259)
||+||++ |.+ .+.++. ...++.+.+.|-||+|+++|++.++++++++++.+++. +.......++|.+...
T Consensus 194 VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~ 273 (388)
T COG1168 194 VISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGII 273 (388)
T ss_pred EEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHH
Confidence 9999999 322 222222 34578999999999999999999999999888866654 4445666788999999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--c-hHH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--E-DKD 209 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 209 (259)
+...+++. +..|+++.++.++.|++.+.+.++.. +|. ++...|+|.+.+|+|+... + .+.
T Consensus 274 A~~aAY~~-----G~~WLd~L~~yl~~N~~~~~~~l~~~-------~P~-----v~v~~p~gTYL~WLD~r~l~l~d~~l 336 (388)
T COG1168 274 ATEAAYNQ-----GEPWLDELLEYLKDNRDYVADFLNKH-------LPG-----VKVTEPQGTYLAWLDCRELGLDDSEL 336 (388)
T ss_pred HHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHHHhh-------CCC-----cEEecCCCceeeeeeccccCCChHHH
Confidence 88889984 88999999999999999999999853 233 7788999999999999887 3 577
Q ss_pred HHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...++++.+|.+.+|..||. +++++|+.++.+.+-++++++||++.+++
T Consensus 337 ~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 337 AEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred HHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 88889999999999999997 67999999999999999999999988763
No 52
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.8e-36 Score=261.63 Aligned_cols=238 Identities=20% Similarity=0.205 Sum_probs=193.1
Q ss_pred CCCcccchhhhhhccCccccccc-----ChhhhcccCC---CCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEG-----EANLWGNASS---DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~-----d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++..+.. +.+.|++.++ ++++++++++||||||.+++ ++|+++|+++|
T Consensus 122 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii 201 (395)
T PRK08175 122 NPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVV 201 (395)
T ss_pred CCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEE
Confidence 59999999999988887643333 2456676663 47889999999999999983 78999999999
Q ss_pred eeccc--c--CC-CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F--WP-HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| + .. ...++ ....+++++++||||.||++|+|+||++++ +++++++.+.......+++++.|.++..
T Consensus 202 ~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~ 280 (395)
T PRK08175 202 HDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIA 280 (395)
T ss_pred EecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC-HHHHHHHHHHHhhcccCCCcHHHHHHHH
Confidence 99999 2 21 12222 223467899999999999999999999998 7999999988876677888889999988
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----chHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-----EDKDCY 211 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 211 (259)
+++. .+.++++.++.++++++.+.+.|+.++ +.+..|++|+|+|++++.. +.+++.
T Consensus 281 ~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~ 341 (395)
T PRK08175 281 ALEG-----DQQCVRDIAEQYKRRRDVLVKGLHEAG--------------WMVEMPKASMYVWAKIPEPYAAMGSLEFAK 341 (395)
T ss_pred HHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CcccCCCEEEEEEEECCcccCCCCHHHHHH
Confidence 8873 466788899999999999999999764 4445788999999999753 245566
Q ss_pred HHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++++++||.+.||+.|+. +++++||+++.+.+.+++++++|.+++.+
T Consensus 342 ~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 342 KLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 677789999999999975 45799999987889999999999998864
No 53
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.8e-35 Score=258.67 Aligned_cols=239 Identities=21% Similarity=0.272 Sum_probs=190.0
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. ++.+|++.+++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 127 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 206 (403)
T TIGR01265 127 RPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPII 206 (403)
T ss_pred CCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 5899999999888887642 3568889999888888899999999999999962 78899999999
Q ss_pred eeccc--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecC-HH-----HHHHHHHhhhhhcCCCCHHHH
Q 024997 65 YDHAY--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKD-EA-----VYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~-----~~~~~~~~~~~~~~~~~~~~q 131 (259)
+||+| | .. ...++. ....++|+++||||+|+++|+|+||+++++ ++ +++.+..... ...+++.+.|
T Consensus 207 ~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q 285 (403)
T TIGR01265 207 ADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQ 285 (403)
T ss_pred EEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHH
Confidence 99999 3 21 222222 223469999999999999999999999852 22 4444444432 2467899999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC------
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------ 205 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 205 (259)
.++..+++. ..+.++++.++.++++++.+.+.|+.+++ +.+..|.+|+|+|++++..
T Consensus 286 ~~~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~p~~g~f~~~~~~~~~~~~~~ 348 (403)
T TIGR01265 286 GALPDILEN----TPQEFFDGKISVLKSNAELCYEELKDIPG-------------LVCPKPEGAMYLMVKLELELFPEIK 348 (403)
T ss_pred HHHHHHHHh----ChHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceecCCCceeEEEEeccccccCCCC
Confidence 999999974 24578899999999999999999987543 4445789999999998642
Q ss_pred -chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 -EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 -~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+++..+++++||.++||+.|+. .+++|||++.+++++++++++|.+++++
T Consensus 349 ~~~~~~~~l~~~~gv~v~pg~~f~~-~~~iRis~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 349 DDVDFCEKLVREESVICLPGSAFGL-PNWVRITITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred CHHHHHHHHHHhCCEEEeCccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 345667778889999999999974 5899999988888999999999998864
No 54
>PLN02231 alanine transaminase
Probab=100.00 E-value=5e-36 Score=268.30 Aligned_cols=244 Identities=18% Similarity=0.214 Sum_probs=187.6
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|...+...|.++ .+|++|+++|++.+++ ++++++++|||||||.+++ ++|++
T Consensus 223 ~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 223 IPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred CCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 599999999999998765 2478899999888743 6888999999999999993 88999
Q ss_pred CCcEEEeeccc----cC--CCCCCCC------C---CCCCeEEEecccccc-CCCcceEEEEEec--CHHHHHHHHHhhh
Q 024997 59 PYAKSIYDHAY----FW--PHFAPIP------A---PADEELMIFTISKLT-GHAGSRFGWAVIK--DEAVYQRMSAYIS 120 (259)
Q Consensus 59 ~~~~vi~De~y----~~--~~~~~~~------~---~~~~~i~~~S~SK~~-g~~G~R~G~i~~~--~~~~~~~~~~~~~ 120 (259)
+|++||+||+| |. ..+.++. + ...++++++||||.+ |.+|+|+||++++ ++++++.+.....
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~ 382 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS 382 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh
Confidence 99999999999 32 1222321 1 122589999999975 8999999999873 3799999887765
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHhc--CCcc---hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC
Q 024997 121 LNTMGVSRECQLRAFKLLKVVLED--GGNN---IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP 195 (259)
Q Consensus 121 ~~~~~~~~~~q~~~~~~l~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (259)
...+++.+.|.++..+++....+ ..+. +.+..++.++++++.+.+.|+++++ +.+.+|+||
T Consensus 383 -~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~g-------------i~~~~p~Gg 448 (534)
T PLN02231 383 -VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEG-------------VTCNKAEGA 448 (534)
T ss_pred -hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceecCCCee
Confidence 35677888899888888531000 1112 2334578899999999999987643 667789999
Q ss_pred eeEEEecC--CC------------chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 196 AYAWVKCE--RE------------EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 196 ~~~~~~~~--~~------------~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+|+|.++. .. +..++..+++++||.++||+.|+. +..++|+++..++++++++++||.+++++
T Consensus 449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 99996553 21 122456688889999999999985 34579999988999999999999998763
No 55
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.8e-35 Score=259.72 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=183.2
Q ss_pred CCCcccchhhhhhcc------Ccc-----c--ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCC
Q 024997 1 MPFYPLYQEQTDYFE------SVD-----Y--KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGP 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g------~~~-----~--~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~ 59 (259)
+|+||.|...+...+ ... . +|++|++.|+ +.+++++++++|||||||.+++ ++|+++
T Consensus 134 ~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~ 211 (416)
T PRK09440 134 APEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQH 211 (416)
T ss_pred CCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHc
Confidence 589999988654332 111 1 3678888887 4567899999999999999993 788999
Q ss_pred CcEEEeecccc--CCCC--CCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHH
Q 024997 60 YAKSIYDHAYF--WPHF--API-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRA 134 (259)
Q Consensus 60 ~~~vi~De~y~--~~~~--~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 134 (259)
|++||+||+|. .+.. ... +...+++|+++||||+ +++|+|+||++++ +++++++.........+++.+.|.++
T Consensus 212 ~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~ 289 (416)
T PRK09440 212 NIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIAD-EEIIEALSNMNGIISLAPGRLGPAIA 289 (416)
T ss_pred CCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCC-HHHHHHHHHHHHHhccCCCcHHHHHH
Confidence 99999999993 1221 111 1225789999999996 8999999999999 79999999888777778899999999
Q ss_pred HHHHHHHHhcCCcchHHH-HHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--CchHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEF-GYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDKDCY 211 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 211 (259)
..++++ +....+..+ .++.++++++.+.+.|++.. ++ . .+.++.|++|+|+|++++. .+.+.+.
T Consensus 290 ~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l-------~~--~-~~~~~~p~gg~fiw~~~~~~~~~~~~~~ 356 (416)
T PRK09440 290 AEMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRYL-------PD--E-PCLIHKPEGAIFLWLWFKDLPITTEELY 356 (416)
T ss_pred HHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc--C-CeEEecCCCceEEEEECCCCCCCHHHHH
Confidence 999974 112233333 56778888888888887531 10 0 0345688999999999975 2444455
Q ss_pred HHHHHcCeeeecCCcccCC--------CCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRAE--------ARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~--------~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.++||.++||+.|+.+ .+++|||++.+.+++++++++|++++++
T Consensus 357 ~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 357 QRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 5667899999999998632 3589999987899999999999998764
No 56
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2e-35 Score=258.31 Aligned_cols=237 Identities=20% Similarity=0.250 Sum_probs=178.1
Q ss_pred CCCcccchhhhhhccC-----------cccccccChh-hhcccC--CCCceEEEEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFES-----------VDYKFEGEAN-LWGNAS--SDTHLVEFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~-----------~~~~~~~d~~-~l~~~~--~~~~~~i~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|..+++..|. .+..+..+.+ .+...+ .+++++++++|||||||.+++ ++|++
T Consensus 125 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~ 204 (402)
T TIGR03542 125 DPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANE 204 (402)
T ss_pred CCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHH
Confidence 5999999999999988 5433333211 121111 256899999999999999993 78899
Q ss_pred CCcEEEeeccc--c--CCC-CCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHH--------HHHHHhhhhh
Q 024997 59 PYAKSIYDHAY--F--WPH-FAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVY--------QRMSAYISLN 122 (259)
Q Consensus 59 ~~~~vi~De~y--~--~~~-~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~--------~~~~~~~~~~ 122 (259)
+|++||+||+| | .+. ..++ +...+++|+++||||.||++|+|+||++++ ++++ +.+.......
T Consensus 205 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~ 283 (402)
T TIGR03542 205 HGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP-KELTYADGHSVIQDWERRQCTK 283 (402)
T ss_pred cCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec-HHHhhcchhhHHHHHHHHhhhc
Confidence 99999999999 3 221 1222 222467999999999999999999999999 6876 2222222223
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC 202 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (259)
..+++.+.|.++..++.. ....++.+.++.++++++.+.+.|+..+ +....+.+|+|+|+++
T Consensus 284 ~~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~~~~~~~~f~~v~l 345 (402)
T TIGR03542 284 FNGASYPVQRAAEAAYAG----EGLQPILEAISYYMENARILRKALEAAG--------------FKVYGGEHAPYLWVKT 345 (402)
T ss_pred ccCCCHHHHHHHHHHHcC----cchhHHHHHHHHHHHHHHHHHHHHHhcC--------------ceecCCCceeEEEEEC
Confidence 346888999988888873 1234566677889999999999998753 3445677899999999
Q ss_pred CCC--chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 203 ERE--EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 203 ~~~--~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+.. +.++...+++++||.++||+.|+. +.+++||+++.+++++++++++|++.|
T Consensus 346 ~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 346 PEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEAL 402 (402)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhhC
Confidence 763 356777788788999999999975 368999998778999999999998764
No 57
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.5e-35 Score=254.62 Aligned_cols=227 Identities=17% Similarity=0.207 Sum_probs=182.8
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccc--c
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAY--F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y--~ 70 (259)
+|+|+.|...++..|.++..+. +.++++ .+++++++++|||||||.+++ ++|+++|++||+||+| |
T Consensus 118 ~p~y~~~~~~~~~~g~~~~~~~-~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 193 (364)
T PRK07865 118 ELAYPTYEVGARLAGATVVRAD-SLTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLEL 193 (364)
T ss_pred CCCcccHHHHHHhcCCEEEecC-ChhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhh
Confidence 5999999999999998876553 233333 357889999999999999983 6789999999999999 2
Q ss_pred --CC-CCCCCC-----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHH
Q 024997 71 --WP-HFAPIP-----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 71 --~~-~~~~~~-----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
.+ ....+. ...+++++++||||.||++|+|+||++++ +++++++.........+++.+.|.++..+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--- 269 (364)
T PRK07865 194 GWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGD-PALVAELLEVRKHAGMMVPAPVQAAMVAALG--- 269 (364)
T ss_pred ccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecC-HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhC---
Confidence 22 111111 13467999999999999999999999998 7999999988776778899999999988887
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeee
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGR 222 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~ 222 (259)
.++++.+.++.++++++.+.+.|+..+ +.+..+++|+|+|++++.. ...+.+.+.++||.++
T Consensus 270 ---~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gv~v~ 331 (364)
T PRK07865 270 ---DDAHVREQRERYARRRAVLRPALEAAG--------------FRVDHSEAGLYLWATRGED-CWDTVAWLAERGILVA 331 (364)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CcccCCCccEEEEEeCCCC-HHHHHHHHHHCCEEEe
Confidence 345778888999999999999998753 4455788999999998543 3444566678999999
Q ss_pred cCCcccC-CCCeEEEEeecChhhHHHHHHHHH
Q 024997 223 EGKKFRA-EARFVRLSLLKSQDDFDLLLHRLD 253 (259)
Q Consensus 223 ~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~ 253 (259)
||..|+. .++++||+++.+++++++++++|+
T Consensus 332 pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 332 PGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred CccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 9998875 468999999888899999999985
No 58
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-35 Score=256.28 Aligned_cols=238 Identities=20% Similarity=0.242 Sum_probs=197.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|..+++..|.++. +|.+|++.+++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii 201 (393)
T PRK05764 122 APYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVL 201 (393)
T ss_pred CCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEE
Confidence 5899999999998887652 3567788899888888899999999999999872 77899999999
Q ss_pred eeccc--c--C-CCCCCC----CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 65 YDHAY--F--W-PHFAPI----PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 65 ~De~y--~--~-~~~~~~----~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
+||+| + . ....++ .+..+++++++||||.+|++|+|+||++++ +++++++.........+++++.|.++.
T Consensus 202 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~ 280 (393)
T PRK05764 202 SDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP-KELIKAMSKLQSHSTSNPTSIAQYAAV 280 (393)
T ss_pred EeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-HHHHHHHHHHHhhcccCCChHHHHHHH
Confidence 99999 2 1 111222 234568999999999999999999999998 799999998887777889999999999
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-------chH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-------EDK 208 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 208 (259)
.+++. .++++.+.++.++++++.+.+.|+++++ +....+++++|+|++++.. +.+
T Consensus 281 ~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 342 (393)
T PRK05764 281 AALNG-----PQDEVEEMRQAFEERRDLMVDGLNEIPG-------------LECPKPEGAFYVFPNVSKLLGKSITDSLE 342 (393)
T ss_pred HHHcC-----ChHHHHHHHHHHHHHHHHHHHHHhhCCC-------------CcccCCCcceEEEEecccccccccCCHHH
Confidence 98872 4567888899999999999999987643 4445788999999998753 145
Q ss_pred HHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.++||..|+. ++++|||++.+++++++++++|.+++++
T Consensus 343 ~~~~l~~~~gi~v~~g~~f~~-~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 343 FAEALLEEAGVAVVPGIAFGA-PGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred HHHHHHHhCCEEEccccccCC-CCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 666777889999999999976 5899999988999999999999998864
No 59
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-35 Score=259.30 Aligned_cols=242 Identities=16% Similarity=0.182 Sum_probs=201.4
Q ss_pred CCCcccchhhhhhccCccc-----ccccChhhhcccCCC-CceE-EEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-----KFEGEANLWGNASSD-THLV-EFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----~~~~d~~~l~~~~~~-~~~~-i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+....+++..|.++. .-++|+++|++.+.. ++++ +++.+.|||||.+++ ++|+++|++||+
T Consensus 186 ~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIE 265 (459)
T COG1167 186 DPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIE 265 (459)
T ss_pred CCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEe
Confidence 6999999999999988763 347888999999854 5665 333445799999994 899999999999
Q ss_pred eccc--c--C-CCCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 66 DHAY--F--W-PHFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 66 De~y--~--~-~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
||.| | . +...++. +..++||+++||||++. ||+|+||+++| +++++++...+.....+++.+.|.++..++
T Consensus 266 DD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p-~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l 343 (459)
T COG1167 266 DDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAP-PELIEKLLRLKQAADLGPSSLSQAALAAFL 343 (459)
T ss_pred eCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCC-HHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 9998 2 2 2222233 45689999999999996 99999999999 799999999999999999999999999999
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHc
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAA 217 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~ 217 (259)
.+ |..+.|+.+.++.++++++.+.+.|+.... ....+..|.+|+|+|++++.. +...+...+.++
T Consensus 344 ~~---G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-----------~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~~ 409 (459)
T COG1167 344 LS---GHYDRHLRRLRREYARRRDALLEALAEYLP-----------ELATWTRPEGGLFLWLELPEGIDARELLAAALEK 409 (459)
T ss_pred Hc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CCeeeecCCceEEEEEEcCCCCCHHHHHHHHHHC
Confidence 84 457889999999999999999999997541 115677999999999999886 555666666678
Q ss_pred Ceeeec-CCcccCC---CCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGRE-GKKFRAE---ARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~-g~~f~~~---~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
|+.+.| |..|..+ .+++||+++. +.+++++++++|.+.+.+
T Consensus 410 gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 410 GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLRE 455 (459)
T ss_pred CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999 8888853 4689999988 899999999999988764
No 60
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-35 Score=250.66 Aligned_cols=234 Identities=20% Similarity=0.273 Sum_probs=188.2
Q ss_pred CCCcccchhhhhhccCccc-----ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcC--CCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-----KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKG--PYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~--~~~~vi~De~ 68 (259)
.|+|+.|...++..|.++. .|..|.+.+.+.+.++++++++||||||||..++ +++.. .+.+||+||+
T Consensus 106 ~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEA 185 (356)
T COG0079 106 EPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEA 185 (356)
T ss_pred CCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence 5999999999999997652 3778888898888779999999999999999993 33332 2899999999
Q ss_pred c--cCC-CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 69 Y--FWP-HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 69 y--~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
| |.+ +...+....+++++++||||+||++|+|+||++++ +++++.+.+.+.. ++++.++|.++.++++
T Consensus 186 Y~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~-~~~i~~l~~vr~p--~~v~~~a~~aa~aal~------ 256 (356)
T COG0079 186 YIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN-PELIAALNKVRPP--FNVSSPALAAAIAALR------ 256 (356)
T ss_pred hhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHcc------
Confidence 9 533 22222235677999999999999999999999999 7999999999876 7799999999999998
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCC
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGK 225 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~ 225 (259)
..+++++..+.+.+.++++.+.|+.++ +....|..+.|++++++......+.+.|.++||.+|...
T Consensus 257 ~~~~~~~~~~~~~~~r~rl~~~l~~~~--------------~~~v~pS~aNFvlv~~~~~~~~~l~~~L~~~giivR~~~ 322 (356)
T COG0079 257 DADYLEESVERIREERERLYAALKALG--------------LFGVFPSQANFVLVRVPDAEAAALAEALLKKGILVRDCS 322 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CCeecCCCCcEEEEECCCccHHHHHHHHHHCCEEEEeCC
Confidence 447899999999999999999999865 121345569999999975213355666667899999976
Q ss_pred cccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 226 KFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 226 ~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
..+..++++||+++. +++.+..++.|+++++.
T Consensus 323 ~~~~~~~~lRitvgt-~een~~ll~AL~~~~~~ 354 (356)
T COG0079 323 SVGLLPGYLRITVGT-PEENDRLLAALREVLKG 354 (356)
T ss_pred CCCCCCCeEEEEeCC-HHHHHHHHHHHHHHHhc
Confidence 633356899999955 55559999999988764
No 61
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.1e-35 Score=251.58 Aligned_cols=231 Identities=19% Similarity=0.273 Sum_probs=180.0
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.+.. +|.+| +.+.+.+.+++++++++|||||||.+++ ++|+++|+++|
T Consensus 100 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii 178 (354)
T PRK06358 100 APTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLI 178 (354)
T ss_pred cCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEE
Confidence 5999999999998887752 34566 4454555567899899999999999993 78889999999
Q ss_pred eeccc--c--CCCCCC-C--CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAP-I--PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y--~--~~~~~~-~--~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+||+| | .+...+ + .+..+++|+++||||.||++|+|+||++++++.+++.+.+... .++++.+.|.++..+
T Consensus 179 ~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~ 256 (354)
T PRK06358 179 IDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTL 256 (354)
T ss_pred EeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHH
Confidence 99999 3 221111 1 1345789999999999999999999999865688888887664 467889999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA 217 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 217 (259)
++ ...++.+.++.++++++.+.+.|+++++ +.+..+. |.|+|++++.. .++...++ ++
T Consensus 257 l~------~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~~~-g~f~~~~~~~~-~~~~~~l~-~~ 314 (354)
T PRK06358 257 LD------DKEYIKKTIQWIKEEKDFLYNGLSEFKG-------------IKVYKPS-VNFIFFKLEKP-IDLRKELL-KK 314 (354)
T ss_pred hc------cHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------cEEcCCc-ceEEEEEcCch-HHHHHHHH-HC
Confidence 86 3457788889999999999999987543 3344554 56899998753 45555555 68
Q ss_pred CeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 218 KIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 218 gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
||.++||+.|+. +++++||++ .++++.+++++.|.++++
T Consensus 315 gI~v~~~~~f~~~~~~~iRls~-~~~~~~~~l~~~l~~~~~ 354 (354)
T PRK06358 315 GILIRSCSNYRGLDENYYRVAV-KSREDNKKLLKALEVILS 354 (354)
T ss_pred CeEEEECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHhC
Confidence 999999999954 568999998 567778888888887764
No 62
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.8e-35 Score=251.11 Aligned_cols=226 Identities=12% Similarity=0.171 Sum_probs=168.6
Q ss_pred CCCcccchhhhhhccCcccccc-----cChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-----GEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-----~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De 67 (259)
+|+|+.|...++..|.++..+. .|.+.++ ..+++++++||||||||.+++ ++|+++|++||+||
T Consensus 86 ~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~---~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE 162 (332)
T PRK06425 86 EPNFNEYKGYAFTHGIRISALPFNLINNNPEILN---NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDE 162 (332)
T ss_pred CCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHh---hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEec
Confidence 5999999999999999875443 3333333 247889999999999999993 67889999999999
Q ss_pred cc--cCCC----CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 68 AY--FWPH----FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 68 ~y--~~~~----~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
+| |... ........+++|+++||||++|++|+|+||++++ +++++.+...... +.++.+.+ .++..
T Consensus 163 ~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~--~~~~~~~~----~~l~~- 234 (332)
T PRK06425 163 AFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEP--WSVCDPAI----DFIRS- 234 (332)
T ss_pred chhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCC--CccCHHHH----HHHHH-
Confidence 99 3211 1111134468999999999999999999999999 6999998875443 33344332 33332
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
+..+.++++.++.++++++.+.+.|++++ +....+.+|+|+|+.++ .+.++...++ ++||.+
T Consensus 235 --~~~~~~~~~~~~~~~~~r~~l~~~L~~~g--------------~~~~~~~~g~f~~~~~~-~~~~~~~~l~-~~gi~v 296 (332)
T PRK06425 235 --IDLDYVAKHSLDIMENERSYLINNLEAMG--------------FRAAGDPSANFITFMIP-DAHDFYSYLL-KNGILV 296 (332)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEECCCCCceEEEEEcC-CHHHHHHHHH-HCCeEE
Confidence 12345667789999999999999998764 44444567889999987 2344554544 689999
Q ss_pred ecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 222 REGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 222 ~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+||+.|+. +++++|||++ ++++.+.+++.|++++
T Consensus 297 ~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 297 RLLDDYECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred EECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 99999964 4689999995 5678888888888775
No 63
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=253.29 Aligned_cols=235 Identities=15% Similarity=0.168 Sum_probs=192.0
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|..+++..|.++. +|.+|.+.|++.++++++++++++||||||.+++ ++|+++|++||
T Consensus 121 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI 200 (386)
T PRK07550 121 LPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALI 200 (386)
T ss_pred CCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEE
Confidence 5999999999998888762 3456778898888888888899999999999883 78999999999
Q ss_pred eeccc--cC--C-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--FW--P-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~~--~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| |. . ...+.. +..+++++++||||.+|++|+|+||++++ +++++++.........+++.+.|.++..
T Consensus 201 ~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~ 279 (386)
T PRK07550 201 LDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS-PARIAEIEKFMDTVAICAPRIGQIAVAW 279 (386)
T ss_pred EeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecC-HHHHHHHHHHHhhcccCCCcHHHHHHHH
Confidence 99999 31 1 111111 23467999999999999999999999999 6999999988877778889999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C-chHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E-EDKDCYGI 213 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~l 213 (259)
+++. .++++++.++.++++++.+.+.|+.+.+ +. ..+.+|+|+|++++. . +.+++..+
T Consensus 280 ~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~-~~~~g~~~~~~~~~~~~~~~~~l~~~l 340 (386)
T PRK07550 280 GLPN-----LADWRAGNRAEIARRRDAFRAVFARLPG-------------WE-LLASGAYFAYVRHPFPDRPSREVARRL 340 (386)
T ss_pred Hhcc-----HHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------ce-eCCCceEEEEecCCCCCCCHHHHHHHH
Confidence 9873 4567888889999999999999987532 22 246789999999874 2 35666667
Q ss_pred HHHcCeeeecCCcccC-CCCeEEEEeec-ChhhHHHHHHHHHHH
Q 024997 214 LKAAKIIGREGKKFRA-EARFVRLSLLK-SQDDFDLLLHRLDEL 255 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~-~~~~~Ris~~~-~~~~~~~~~~~l~~~ 255 (259)
++++||.++||..|+. +.+++||+++. +++++++++++|.++
T Consensus 341 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 341 AKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred HHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 7889999999999975 46899999986 889999999999875
No 64
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-34 Score=252.53 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=190.1
Q ss_pred CCCcccchhhhhhccCcccc--------cc-cChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDYK--------FE-GEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~--------~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~v 63 (259)
+|+|+.|...++..|..... |. .+++.|++.++++++++++++||||||.+++ ++|+++|+++
T Consensus 119 ~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~i 198 (397)
T PRK07568 119 EPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFL 198 (397)
T ss_pred cCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEE
Confidence 58999999988888876532 22 2357788888888999999999999999872 7889999999
Q ss_pred Eeeccc--c--CC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 64 IYDHAY--F--WP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 64 i~De~y--~--~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
|+||+| | .+ ...++. ...+++++++||||.||++|+|+||++++++++++.+...... .++++.+.|.++.
T Consensus 199 i~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~ 277 (397)
T PRK07568 199 ISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAA 277 (397)
T ss_pred EEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHH
Confidence 999999 3 22 122222 2357899999999999999999999998656888887665442 4678999999999
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc-hHHHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGIL 214 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll 214 (259)
.+++. .+.++++.++.++++++.+.+.|+++++ +.+..|++|+|+|++++..+ .++...++
T Consensus 278 ~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~p~g~~~~~~~l~~~~~~~~~~~l~ 339 (397)
T PRK07568 278 ALLDT-----PESYFDEVREEYKKRRDILYEELNKIPG-------------VVCEKPKGAFYIIAKLPVDDAEDFAKWLL 339 (397)
T ss_pred HHhhC-----CHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceecCCCcceEEEEecCCCCHHHHHHHHH
Confidence 99973 4678888999999999999999987543 44567889999999997543 45556666
Q ss_pred HH-----cCeeeecCCcccC----CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 215 KA-----AKIIGREGKKFRA----EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 215 ~~-----~gi~~~~g~~f~~----~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++ +||.+.||..|+. +++++|||++.+++++++++++|.+++++
T Consensus 340 ~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 340 TDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEK 392 (397)
T ss_pred hhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 54 6999999999852 35799999988889999999999998764
No 65
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.8e-34 Score=252.41 Aligned_cols=239 Identities=16% Similarity=0.211 Sum_probs=182.2
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.... +|.+|++++++.+++++++++++|||||||.+++ ++|+++|++||
T Consensus 126 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii 205 (404)
T PRK09265 126 APDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIF 205 (404)
T ss_pred CCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEE
Confidence 5999999999988876542 3567888899888888999999999999999883 77899999999
Q ss_pred eeccc--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEec-CHH----HHHHHHHhhhhhcCCCCHHHHH
Q 024997 65 YDHAY--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIK-DEA----VYQRMSAYISLNTMGVSRECQL 132 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~-~~~----~~~~~~~~~~~~~~~~~~~~q~ 132 (259)
+||+| | .. ...++. ....++++++||||+||++|+|+||++++ +++ +++.+... .....+++.+.|.
T Consensus 206 ~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~ 284 (404)
T PRK09265 206 ADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQH 284 (404)
T ss_pred EehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHH
Confidence 99999 2 22 222322 12336899999999999999999999963 244 33333322 2235678899999
Q ss_pred HHHHHHHHHHhcCCcc--hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----
Q 024997 133 RAFKLLKVVLEDGGNN--IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----- 205 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 205 (259)
++..++.. .+. ...+..+.+.++++.+.+.|+.+++ +.+..|++|+|+|++++..
T Consensus 285 ~~~~~l~~-----~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~-------------~~~~~p~~g~~l~~~~~~~~~~~~ 346 (404)
T PRK09265 285 AIQTALGG-----YQSINELILPGGRLYEQRDRAWELLNAIPG-------------VSCVKPKGALYAFPKLDPKVYPIH 346 (404)
T ss_pred HHHHHhcC-----chhHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------CcccCCCcceEEEEEecccccCCC
Confidence 99888862 221 1212234677788888888876543 4456889999999998642
Q ss_pred -chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 -EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 -~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+.+++.++||.++||+.|+. +++++|++++.+.+++++++++|++++++
T Consensus 347 ~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 347 DDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred CHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 346678888899999999999974 46899999977899999999999998864
No 66
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=100.00 E-value=4.6e-35 Score=238.74 Aligned_cols=256 Identities=58% Similarity=1.089 Sum_probs=203.6
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccccCCCCCCCCCC
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAYFWPHFAPIPAP 80 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y~~~~~~~~~~~ 80 (259)
.|.||.|......+......|..|.....+.-++.+-+=++++||||.|.+-..+.+..+..+|-|-+||||++.++...
T Consensus 103 aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~~~~~~~~~IElVTSPNNPDG~lr~~V~~g~~~k~I~D~AYYWPhyTpI~~~ 182 (363)
T PF04864_consen 103 APYYSSYPEQTDFFDSRLYKWAGDASNFKNSDNPSPYIELVTSPNNPDGQLREAVLNGSSGKVIHDLAYYWPHYTPITAP 182 (363)
T ss_dssp SS--CHHHHHCCCT-BTTEEEEEECCCGTT-S-CCGEEEEEESS-TTT------SSTTTEEEEEEE-TT-STTTS---S-
T ss_pred CCCccchHHHHHhccccCccccccHHhhccCCCCCCeEEEEeCCCCCcccccchhcCCCCcceeeeeeeecccccccCCC
Confidence 49999999999998888889999987776333457888899999999999988888888899999999999999999988
Q ss_pred CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCc-----chHHHHHH
Q 024997 81 ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGN-----NIFEFGYN 155 (259)
Q Consensus 81 ~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~-----~~~~~~~~ 155 (259)
.+.+|+++|+||.-|.+|.|+||++..|+++.++|..+....+.|+|.-.|.-++.+|+...++... ++++-.++
T Consensus 183 aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~ 262 (363)
T PF04864_consen 183 ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYS 262 (363)
T ss_dssp B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHH
T ss_pred CCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999988776322 57888999
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
.|++|++++.+.++.-..+.+..+.++.|+|++.....++.|.|++++..+.+.+...|+++||..+.|..|+.++.++|
T Consensus 263 ~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~fga~~ryVR 342 (363)
T PF04864_consen 263 TMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVLFGADSRYVR 342 (363)
T ss_dssp HHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGGGTS-TTEEE
T ss_pred HHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCccCCCCCeEE
Confidence 99999999999999999999999999999999999999999999999976667888889999999999999999999999
Q ss_pred EEeecChhhHHHHHHHHHHHh
Q 024997 236 LSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 236 is~~~~~~~~~~~~~~l~~~l 256 (259)
||+-.++++++.+++||..++
T Consensus 343 lSml~~~d~Fd~l~~rL~~lv 363 (363)
T PF04864_consen 343 LSMLKRDDDFDQLLERLSKLV 363 (363)
T ss_dssp EESSS-HHHHHHHHHHHHCCH
T ss_pred EeccCCHHHHHHHHHHHHhhC
Confidence 999889999999999998653
No 67
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.5e-34 Score=249.03 Aligned_cols=227 Identities=16% Similarity=0.175 Sum_probs=181.2
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccc--c
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAY--F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y--~ 70 (259)
+|+|+.|...++..|.+...+. +.+.++ .++++++++++||||||.+++ ++|+++|+++|+||+| |
T Consensus 112 ~p~y~~~~~~~~~~g~~~~~v~-~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (357)
T TIGR03539 112 ELAYPTYEVGALLAGATPVAAD-DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLEL 187 (357)
T ss_pred CCCcHHHHHHHHhcCCEEeccC-ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhh
Confidence 6999999999998888775542 233332 357899999999999999883 7889999999999999 3
Q ss_pred --CCCC-CCCC-----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHH
Q 024997 71 --WPHF-APIP-----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 71 --~~~~-~~~~-----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
.+.. ..+. ...+++++++||||.|+++|+|+||++++ +++++.+.+.......+++.+.|.++..+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--- 263 (357)
T TIGR03539 188 GWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGD-PALVAELLTVRKHAGLMVPAPVQAAMVAALG--- 263 (357)
T ss_pred ccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHcC---
Confidence 2211 1121 12457999999999999999999999998 7999999887776678899999999988886
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeee
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGR 222 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~ 222 (259)
.+.++.+.++.++++++.+.+.|+..+ +.+.++++|+|+|++++.. ...+.+.|.++||.++
T Consensus 264 ---~~~~~~~~~~~~~~~~~~~~~~L~~~g--------------~~~~~p~~~~~~~~~~~~~-~~~~~~~l~~~gV~v~ 325 (357)
T TIGR03539 264 ---DDGHVAEQKARYAARRAQLKPALEKAG--------------FRIDHSEAGLYLWATRGED-AWDTVDRLAELGILVA 325 (357)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCCcCCCccEEEEEECCCC-HHHHHHHHHhCCEEEC
Confidence 345677788999999999999998753 3345788999999998653 4445556678999999
Q ss_pred cCCcccC-CCCeEEEEeecChhhHHHHHHHHH
Q 024997 223 EGKKFRA-EARFVRLSLLKSQDDFDLLLHRLD 253 (259)
Q Consensus 223 ~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~ 253 (259)
||..|+. +.+++|||++.+++++++++++|.
T Consensus 326 pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l~ 357 (357)
T TIGR03539 326 PGDFYGPAGSQHVRVALTATDERIAAAVARLT 357 (357)
T ss_pred CccccCCCCCCeEEEEecCCHHHHHHHHHhhC
Confidence 9998864 468999999888899999998873
No 68
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-34 Score=249.73 Aligned_cols=234 Identities=18% Similarity=0.232 Sum_probs=179.0
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccC-CCCceEEEEcCCCCCChhhHH-----Hhhc--CCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNAS-SDTHLVEFVTAPNNPDGQMNK-----AVLK--GPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~-----~la~--~~~~~v 63 (259)
+|+|+.|...++..|.++. +|.+|++++.+.+ ++++++++++|||||||.+++ ++++ +.+++|
T Consensus 108 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~i 187 (364)
T PRK04781 108 PPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALV 187 (364)
T ss_pred CCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEE
Confidence 5899999988888887652 2445666665444 678899999999999999993 3433 247899
Q ss_pred Eeeccc--cC--CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 64 IYDHAY--FW--PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 64 i~De~y--~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
|+||+| |. +......+..+++++++||||+||++|+|+||++++ +++++.+.+.... ++++.+.|.++..+++
T Consensus 188 I~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~-~~l~~~l~~~~~~--~~~~~~~~~~a~~~l~ 264 (364)
T PRK04781 188 VVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN-AELIAVLRRCQAP--YPVPTPCAALAEQALS 264 (364)
T ss_pred EEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC-HHHHHHHHhccCC--CCCCHHHHHHHHHHHh
Confidence 999999 42 222222245578999999999999999999999999 7999999987764 6788999999888887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
. ....+..+.++.++++++.+.+.|+.+++ +....|.+|+|+|++++. .+.+.+.+.++||
T Consensus 265 ~----~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~p~~g~f~~~~~~~--~~~~~~~l~~~gI 325 (364)
T PRK04781 265 A----PALAVTARRVAEVRAERERLHAALAQLPG-------------VRRVYPSQGNFLLVRFDD--AEAAFQALLAAGV 325 (364)
T ss_pred c----ccHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CCeECCCCCcEEEEEcCC--HHHHHHHHHHCCe
Confidence 3 12245566677889999999999987643 322357789999999873 4556666778999
Q ss_pred eeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 220 IGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 220 ~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++|..|+..++++||+++ .+++.+.+++.|+++..
T Consensus 326 ~v~~~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 326 VVRDQRAAPRLSDALRITLG-TPEQNDRVLAALQRTQA 362 (364)
T ss_pred EEeeCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 99999887655689999995 46777777777776543
No 69
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.2e-34 Score=246.92 Aligned_cols=232 Identities=19% Similarity=0.281 Sum_probs=176.3
Q ss_pred CCCcccchhhhhhccCcccc--------cccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYK--------FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++.. |.+|. ++.+.+.+++++++++|||||||.+++ ++|+++|++||
T Consensus 101 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii 179 (356)
T PRK08056 101 TPGFAEYRRALQQVGCEIRRYSLREADGWQLTD-AILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALI 179 (356)
T ss_pred CCCcHHHHHHHHHcCCeEEEEecccccCCCccH-HHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEE
Confidence 59999999999999887632 34442 344556678899999999999999983 67889999999
Q ss_pred eeccc--cCCC---CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 65 YDHAY--FWPH---FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 65 ~De~y--~~~~---~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
+||+| |... ..+.....+++++++||||.||++|+|+||++++++++++.+..... .++++.+.|.++..+++
T Consensus 180 ~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~ 257 (356)
T PRK08056 180 LDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM--PWSINAFAALAGEVILQ 257 (356)
T ss_pred EecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CCchhHHHHHHHHHHhC
Confidence 99999 3211 11211334689999999999999999999999864678888876543 36678888888888886
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
...+..+.++.++++++.+.+.|+.+++ +.+. +.+++|+|++++..+.++...++ ++||
T Consensus 258 ------~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~gI 316 (356)
T PRK08056 258 ------DRAYQQATWQWLAEEGARFYQALCALPL-------------LTVW-PGRANYLFLRCERPDIDLQRALL-TQRI 316 (356)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------cEEc-CCCCcEEEEEcCCChHHHHHHHH-HCCe
Confidence 3456778889999999999999987643 3333 44689999998754445555555 6899
Q ss_pred eeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 220 IGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 220 ~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++|..|.. +.+++||+++ ++++.+.+++.|+++++
T Consensus 317 ~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 317 LIRSCANYPGLDSRYYRVAIR-SAAENERLLAALRNVLT 354 (356)
T ss_pred EEEECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHHHc
Confidence 9999999953 4579999995 56777777777777654
No 70
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=6.1e-34 Score=245.54 Aligned_cols=227 Identities=15% Similarity=0.178 Sum_probs=172.0
Q ss_pred CCCcccchhhhhhccCccccccc-----------ChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEG-----------EANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~-----------d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++..+.. +++.+++. .+++++++++|||||||.+++ ++++++++ +|
T Consensus 104 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~I 181 (360)
T PRK07392 104 TPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQ-LTPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VV 181 (360)
T ss_pred CCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHh-ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EE
Confidence 69999999999999988744332 23333322 246789999999999999994 78888885 66
Q ss_pred eeccc--c--CCCCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y--~--~~~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+||+| | .....+. ....+++++++||||.||++|+|+||++++ +++++.+..... .++++.+.|.++..+
T Consensus 182 iDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~-~~~~~~~~~~~~--~~~~s~~~q~~~~~~ 258 (360)
T PRK07392 182 VDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH-PDRLQRWQQWRD--PWPVNGLAAAAAIAA 258 (360)
T ss_pred EECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC-HHHHHHHHhhCC--CCCCCHHHHHHHHHH
Confidence 69999 3 1111121 134568999999999999999999999999 699998876553 477899999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA 217 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 217 (259)
++. ..+.+..++.++++++.+.+.|+.+++ +.. .+.+++|+|++++..+.++...+++++
T Consensus 259 l~~------~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~-~~~~~~fl~~~~~~~~~~l~~~ll~~~ 318 (360)
T PRK07392 259 LAD------RDFQQQTWAWLPPAREALFQGLASLPG-------------LTP-LPSAANFLLVQSQGSALQLQEKLLQQH 318 (360)
T ss_pred hcc------HHHHHHHHHHHHHHHHHHHHHHHhCCC-------------cEE-CCCCCCEEEEEcCCCHHHHHHHHHhhC
Confidence 872 346666677889999999999987643 333 347899999998754456666777888
Q ss_pred CeeeecCCcccC-CCCeEEEEeecC--hhhHHHHHHHH
Q 024997 218 KIIGREGKKFRA-EARFVRLSLLKS--QDDFDLLLHRL 252 (259)
Q Consensus 218 gi~~~~g~~f~~-~~~~~Ris~~~~--~~~~~~~~~~l 252 (259)
||.++||..|+. +++++||+++.+ .+++.++++++
T Consensus 319 gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 319 RILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred CEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 999999999975 468999999763 24566666554
No 71
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.8e-34 Score=249.18 Aligned_cols=232 Identities=21% Similarity=0.313 Sum_probs=189.4
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|...++..|.++. .|.+|++.|++.+++ +++++++++||||||.+++ ++|++
T Consensus 100 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 100 DPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp ESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred CCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 5999999999999998863 457889999988754 5789999999999999994 56999
Q ss_pred CCcEEEeeccc--c--CCC-CCC-CC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 59 PYAKSIYDHAY--F--WPH-FAP-IP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 59 ~~~~vi~De~y--~--~~~-~~~-~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
+|++||+||+| + ... ..+ .. ....++++++|+||.||++|+|+||++++ +++++.+........ .+.+.
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~-~~~~~~l~~~~~~~~--~~~~~ 256 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP-PELIERLRRFQRSGL--SSSPM 256 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE-HHHHHHHHHHHHHTT--SSHHH
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch-hhhhhhhhhcccccc--ccchh
Confidence 99999999999 2 211 111 11 34445999999999999999999999998 799999998887643 38888
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHH
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKD 209 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 209 (259)
|.++..++..... ..+++.+.++.++++++.+.+.|++.+ +.+..+++|+|+|+.++.. +.++
T Consensus 257 ~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l 320 (363)
T PF00155_consen 257 QAAAAAALSDPEL--VEKWLEELRERLRENRDLLREALEEIG--------------ITVLPPEAGFFLWVRLDPNDAEEL 320 (363)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT--------------SEEEHHSBSSEEEEEESHHHHHHH
T ss_pred hHHHHHhhhcccc--cccccccchhhHHHHHHHHHHHHHHhh--------------hheeeccCccEEEEEcccchHHHH
Confidence 9988888885310 123889999999999999999998764 6667888999999998765 4577
Q ss_pred HHHHHHHcCeeeecCCcccCCCCeEEEEe-ecChhhHHHHHHHH
Q 024997 210 CYGILKAAKIIGREGKKFRAEARFVRLSL-LKSQDDFDLLLHRL 252 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~~~~~~~~~~~~l 252 (259)
..++++++||.++||..|+. ++++|+++ ..+++++++++++|
T Consensus 321 ~~~L~~~~gi~v~pg~~~~~-~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 321 AQELLEEYGILVRPGSYFGV-PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHHHHTEEEEEGGGGTS-TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEEecCCCCC-CCEEEEEeccCCHHHHHHHHhhC
Confidence 77878767999999999998 79999999 44999999999986
No 72
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-34 Score=251.43 Aligned_cols=234 Identities=13% Similarity=0.059 Sum_probs=177.0
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC---CCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|+.|..+++..|.++. .|++|++.+++.+. +++++++++|||||||.+++ ++|+++|+
T Consensus 131 ~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~ 210 (404)
T PTZ00376 131 NPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNL 210 (404)
T ss_pred CCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 6999999999999998762 36778888888773 45688888999999999993 78999999
Q ss_pred EEEeeccc--c--CC---CCCCC---CCCCCCeEEEeccccccCCCcceEEEE---EecCHHHHHHHH----HhhhhhcC
Q 024997 62 KSIYDHAY--F--WP---HFAPI---PAPADEELMIFTISKLTGHAGSRFGWA---VIKDEAVYQRMS----AYISLNTM 124 (259)
Q Consensus 62 ~vi~De~y--~--~~---~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i---~~~~~~~~~~~~----~~~~~~~~ 124 (259)
+||+||+| | .. ...++ ....+++|+++||||.|+++|+|+||+ +++ +++++.+. ........
T Consensus 211 ~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 289 (404)
T PTZ00376 211 IPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCAN-KEEAANVLSQLKLIIRPMYS 289 (404)
T ss_pred EEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCC-HHHHHHHHHHHHHHHhhhcC
Confidence 99999999 3 11 11111 223458999999999999999999998 456 67665543 33333345
Q ss_pred CCCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC
Q 024997 125 GVSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE 203 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (259)
+++.+.|.++..++++.. .....+++++.+++++++++.+.+.|++++. . ..+.+..|++|+|+|++++
T Consensus 290 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~---------~~~~~~~p~gg~f~~~~~~ 359 (404)
T PTZ00376 290 SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGS-P---------GDWEHIINQIGMFSFTGLT 359 (404)
T ss_pred CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C---------CcccccccCceEEEecCCC
Confidence 567899999999887310 0001123556677899999999999987531 0 0034457899999999884
Q ss_pred CCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee-cChhhHHHHHHHHHHHhh
Q 024997 204 REEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 204 ~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-~~~~~~~~~~~~l~~~l~ 257 (259)
.+++..+++++||.+.|| + |+|++ .+++++++++++|++++.
T Consensus 360 ---~~~~~~L~~~~~v~v~p~-------~--Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 360 ---KEQVERLIEKYHIYLLDN-------G--RISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ---HHHHHHHHHhCCEeecCC-------C--eEEEeccCHHhHHHHHHHHHHHHh
Confidence 688889998889999996 1 99997 499999999999998864
No 73
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.4e-33 Score=240.42 Aligned_cols=222 Identities=19% Similarity=0.224 Sum_probs=172.8
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeecccc--
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAYF-- 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y~-- 70 (259)
+|+|+.|...++..|.++..+.. +++++.++ ++++++++|||||||.+++ ++|+++|++||+||+|.
T Consensus 93 ~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~ 169 (330)
T PRK05664 93 SPCYAEHAHAWRRAGHQVRELDE--AEVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN 169 (330)
T ss_pred CCChHHHHHHHHHcCCeEEEech--hhHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC
Confidence 69999999999999998875544 45666553 5677899999999999993 56788999999999993
Q ss_pred CC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 WP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.+ +...+ ...+++++++||||+||++|+|+||++++ +++++.+.+.... +.++.+.|.++..+|+. ..
T Consensus 170 ~~~~s~~~~-~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~~~~~~~~~~--~~~~~~~~~~~~~~L~~------~~ 239 (330)
T PRK05664 170 TPQHSLAAC-AHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLGP--WTVSGPTRWLAQAALAD------TP 239 (330)
T ss_pred CCccccccc-ccCCCEEEEeeccccccCCCcceEEEEeC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHHhC------hH
Confidence 22 22222 23468999999999999999999999999 7999999887543 56788999999999972 34
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC--eeEEEecCCCchHHHHHHHHHcCeeeecCCc
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP--AYAWVKCEREEDKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~ 226 (259)
+.++.++.++++++.+.+.|+.++ + .+.+| +|+|++++ +.+.+.+.|.++||.+++
T Consensus 240 ~~~~~~~~~~~~r~~l~~~L~~~~--------------~---~~~~~~~~f~~~~~~--~~~~~~~~l~~~gi~v~~--- 297 (330)
T PRK05664 240 WQRRQRERLLAASQRLAALLRRHG--------------L---TPAGGCALFQWVRTE--DAAALHEFLARRGILTRL--- 297 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--------------C---cccCCcceEEEEecC--CHHHHHHHHHHCCeEEEE---
Confidence 567788999999999999998753 2 23344 78898875 345566667789999985
Q ss_pred ccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 227 FRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 227 f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
|+ ..+++|||++.++++.+++++.|+++.++
T Consensus 298 f~-~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 298 FE-QPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred CC-CCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 54 34799999986667777777777776553
No 74
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-34 Score=246.57 Aligned_cols=229 Identities=20% Similarity=0.236 Sum_probs=178.7
Q ss_pred CCCcccchhhhhhccCcc------cccccChhhhcccC-CCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVD------YKFEGEANLWGNAS-SDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++ ..|.+|+++|++.+ ++++++++++|||||||.+++ ++++.. ++||+||+
T Consensus 134 ~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~Dea 212 (380)
T PLN03026 134 PPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEA 212 (380)
T ss_pred CCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECc
Confidence 599999999999888775 23678889999888 678999999999999999983 666654 89999999
Q ss_pred c--cC--CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhc
Q 024997 69 Y--FW--PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLED 144 (259)
Q Consensus 69 y--~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 144 (259)
| |. ..........+++++++||||.||++|+|+||++++ +++++.+.+.... ++++.+.|.++.++|+
T Consensus 213 Y~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~aL~----- 284 (380)
T PLN03026 213 YIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALS----- 284 (380)
T ss_pred chhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHhh-----
Confidence 9 32 111111134578999999999999999999999999 6999998877653 6788999999999987
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-CchHHHHHHHHHcCeeeec
Q 024997 145 GGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-EEDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~~~~ 223 (259)
..+++++.++.++++++.+.+.|+.++. + ...|.+++|+|++++. .+...+.+.|.++||.+++
T Consensus 285 -~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~-~~~p~~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~ 349 (380)
T PLN03026 285 -NPKYLEDVKNALVEERERLFGLLKEVPF-------------L-EPYPSDANFILCRVTSGRDAKKLKEDLAKMGVMVRH 349 (380)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------C-eECCCCCeEEEEECCCCCCHHHHHHHHHHCCeEEEE
Confidence 3467888899999999999999987652 2 2367789999999874 3334444455578999999
Q ss_pred CCcccCCCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 224 GKKFRAEARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 224 g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+..++ ..+++|||++. +++.+.+++.|+++
T Consensus 350 ~~~~~-~~~~lRis~~~-~~~~~~l~~al~~~ 379 (380)
T PLN03026 350 YNSKE-LKGYIRVSVGK-PEHTDALMEALKQL 379 (380)
T ss_pred CCCCC-CCCEEEEecCC-HHHHHHHHHHHHHh
Confidence 87633 35799999974 55666666666554
No 75
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-34 Score=246.20 Aligned_cols=225 Identities=18% Similarity=0.248 Sum_probs=174.2
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcC--CCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKG--PYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~--~~~~vi~ 65 (259)
+|+|+.|...++..|..+. +|.++.+.+++.. +++++++++|||||||.+++ ++++. .+.+||+
T Consensus 113 ~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~ 191 (357)
T PRK14809 113 DPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVV 191 (357)
T ss_pred CCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEE
Confidence 5999999988888776542 3555666665543 35788999999999999993 44433 3789999
Q ss_pred eccc--cCC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 66 DHAY--FWP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 66 De~y--~~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
||+| |.. .........+++++++||||.||++|+|+||++++ +++++++.+... .++++.+.|.++..+++
T Consensus 192 De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~-- 266 (357)
T PRK14809 192 DEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP-EEWADAYARVNT--PFAASELACRAGLAALD-- 266 (357)
T ss_pred echhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhC--
Confidence 9999 321 11111134578999999999999999999999999 699999987654 46788999999988886
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
.++++++.++.++++++.+.+.|+... .+.+|+|+|+++. +.+.+.+.++++||.+
T Consensus 267 ----~~~~~~~~~~~~~~~r~~l~~~L~~~~------------------~~~~g~f~~~~~~--~~~~~~~~l~~~gv~v 322 (357)
T PRK14809 267 ----DDEHVERTVETARWAREYIREELDAPT------------------WESAGNFVLAEVG--DASAVAEAAQERGVIV 322 (357)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHhcCcc------------------CCCCCCEEEEECC--CHHHHHHHHHHCCEEE
Confidence 356888888899998888888875311 2567899999985 3344445567899999
Q ss_pred ecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 222 REGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+||+.|+. ++++||+++ +++++++++++|+++++
T Consensus 323 ~~g~~f~~-~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 323 RDCTSFGL-PECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred EECccCCC-CCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 99999975 489999996 47899999999999875
No 76
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-34 Score=246.49 Aligned_cols=227 Identities=17% Similarity=0.181 Sum_probs=173.1
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCC----CCceEEEEcCCCCCChhhHH-----Hhhc-CCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASS----DTHLVEFVTAPNNPDGQMNK-----AVLK-GPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~~-----~la~-~~~~~v 63 (259)
+|+|+.|..+++..|.++. .|++|+++|++.++ +++++++++|||||||.+++ ++++ .+|++|
T Consensus 123 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~i 202 (374)
T PRK02610 123 EPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILV 202 (374)
T ss_pred CCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEE
Confidence 6999999999999988752 37888899988874 57899999999999999994 2322 248999
Q ss_pred Eeeccc--cCCCCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 64 IYDHAY--FWPHFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 64 i~De~y--~~~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
|+||+| |... .... ...+++|+++||||+||++|+|+||++++ +++++.+..... .++++.+.|.++..+++
T Consensus 203 I~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~-~~l~~~l~~~~~--~~~~~~~~q~a~~~~l~ 278 (374)
T PRK02610 203 VIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH-PELIAVLEKVRL--PYNLPSFSQLAAQLALE 278 (374)
T ss_pred EEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHhc
Confidence 999999 3211 1111 23457899999999999999999999998 799999988764 36688999999988887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcC
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAK 218 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~g 218 (259)
. .+.+.+..++.++ +++.+.+.|+.+++ +.. .|++|+|+|++++.. +...+.+.+.++|
T Consensus 279 ~-----~~~~~~~~~~~~~-~r~~l~~~L~~~~~-------------~~~-~p~~g~f~~~~l~~~~~~~~~~~~l~~~g 338 (374)
T PRK02610 279 H-----RQELLAAIPEILQ-ERDRLYQALQELPQ-------------LRV-WPSAANFLYLRLSQDAALAALHQALKAQG 338 (374)
T ss_pred C-----HHHHHHHHHHHHH-HHHHHHHHHHhCCC-------------cEe-CCCcceEEEEeCCCCCCHHHHHHHHHHCC
Confidence 3 4455555554444 46777777876542 332 478899999999753 4455566677899
Q ss_pred eeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 219 IIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 219 i~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
|.++++ .+++|||++. ++++++++++|++++++
T Consensus 339 i~v~~~------~~~lRls~~~-~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 339 TLVRHT------GGGLRITIGT-PEENQRTLERLQAALTQ 371 (374)
T ss_pred EEEEeC------CCeEEEeCCC-HHHHHHHHHHHHHHHhh
Confidence 999863 3789999975 56789999999998753
No 77
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-33 Score=241.49 Aligned_cols=221 Identities=16% Similarity=0.179 Sum_probs=171.0
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----H---hhcCCCcEEEeeccc--c
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----A---VLKGPYAKSIYDHAY--F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~---la~~~~~~vi~De~y--~ 70 (259)
+|+|+.|...++..|.++..+..|.+.+ .+..+++++||||||||.+++ + .|.+++.++|+||+| |
T Consensus 100 ~P~y~~y~~~~~~~g~~~~~v~~~~~~~----~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 100 PLAYSEYAPAFARHGHRVVPLDEAADTL----PAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred CCCcHHHHHHHHHCCCEEEeecccchhc----cccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 5999999999999998887665554333 234568899999999999983 3 355678999999999 3
Q ss_pred C--CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 W--PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
. ++...+. ..+++++++||||+||++|+|+||++++ +++++.+.+.... ++++.+.|.++.++++ ...
T Consensus 176 ~~~~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~--~~vs~~~q~a~~~~L~------~~~ 245 (339)
T PRK06959 176 LPAASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGA--WTVSGPARHAVRAAFA------DAA 245 (339)
T ss_pred CCcccchhcc-CCCCEEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhC------cHH
Confidence 2 1222221 2467999999999999999999999999 7999999987654 6688999999999997 345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
+.++.++.++++++.+.+.|++++ +... .+++|+|++++ +...+.+.|.++||.++. |+
T Consensus 246 ~~~~~~~~~~~~r~~l~~~L~~~g--------------~~~~--~~~~f~~~~~~--~~~~l~~~l~~~GI~vr~---~~ 304 (339)
T PRK06959 246 WQAAMRERLAADGARLAALLRAHG--------------FAVH--ATPLFSWTDDP--RAAALHAALARRGIWTRY---FA 304 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--------------CCcc--CcceEEEEeCC--CHHHHHHHHHhCCeEEEE---CC
Confidence 778889999999999999999764 2222 35799999886 344455566678999985 44
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
. .+++|||++.++++++.+++.|++++.
T Consensus 305 ~-~~~lRisi~~~~~e~~~l~~al~~~~~ 332 (339)
T PRK06959 305 P-PPSVRFGLPADEAEWQRLEDALAECVP 332 (339)
T ss_pred C-CCeEEEECCCCHHHHHHHHHHHHHHHH
Confidence 3 479999996677788888888777653
No 78
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-34 Score=247.41 Aligned_cols=227 Identities=19% Similarity=0.236 Sum_probs=175.4
Q ss_pred CCCcccchhhhhhccCcc------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----Hh---hcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYFESVD------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AV---LKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~l---a~~~~~~vi~D 66 (259)
+|+|+.|...++..|.++ .+|.+|++++++.+ ++++++++||||||||.+++ ++ |++ +.+||+|
T Consensus 106 ~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivD 183 (351)
T PRK01688 106 PPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVAD 183 (351)
T ss_pred CCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEE
Confidence 599999999999988775 24778888898877 57899999999999999993 33 343 6889999
Q ss_pred ccc--cCCC--CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHH
Q 024997 67 HAY--FWPH--FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 67 e~y--~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
|+| |.+. ...+....+++++++||||.||++|+|+||++++ +++++.+.+.... ++++.+.|.++..+++.
T Consensus 184 Eay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~-~~~i~~l~~~~~~--~~v~~~~~~~a~~~L~~-- 258 (351)
T PRK01688 184 EAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN-EEVINLLLKVIAP--YPLSTPVADIAAQALSP-- 258 (351)
T ss_pred CchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC-HHHHHHHHhccCC--CCCCHHHHHHHHHHHhc--
Confidence 999 4322 1122234568999999999999999999999998 7999999876654 66888888888888873
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeee
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGR 222 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~ 222 (259)
...+++.+.++.++++++.+.+.|+.+++ +....|.+++|+|++++. .+.+.+.|.++||.++
T Consensus 259 --~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~ps~~nfi~~~~~~--~~~l~~~L~~~gi~vr 321 (351)
T PRK01688 259 --QGIAAMRERVAEINANRQWLIAALKEIPC-------------VEQVFDSETNYILARFTA--SSAVFKSLWDQGIILR 321 (351)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CCeECCCCCcEEEEEcCC--HHHHHHHHHHCCeEEE
Confidence 12356778888899999999999987653 323456788999999863 3444455557899999
Q ss_pred cCCcccCCCCeEEEEeecChhhHHHHHHHH
Q 024997 223 EGKKFRAEARFVRLSLLKSQDDFDLLLHRL 252 (259)
Q Consensus 223 ~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l 252 (259)
++..+...++++|||++ ++++++.+++.|
T Consensus 322 ~~~~~~~~~~~iRis~~-~~~e~~~l~~al 350 (351)
T PRK01688 322 DQNKQPGLSNCLRITIG-TREECQRVIDAL 350 (351)
T ss_pred ECCCcCCCCCeEEEeCC-CHHHHHHHHHhh
Confidence 87766433589999996 578888887766
No 79
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-33 Score=243.60 Aligned_cols=232 Identities=18% Similarity=0.245 Sum_probs=181.9
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcC------C
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKG------P 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~------~ 59 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++++++++++++||||||.+++ ++|++ +
T Consensus 127 ~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~ 206 (394)
T PRK06836 127 APYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGR 206 (394)
T ss_pred CCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCC
Confidence 5999999999988887652 2578889999999888999999999999999973 77888 8
Q ss_pred CcEEEeeccc--c--CC-CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHH------HHHhhhh-hcCCCC
Q 024997 60 YAKSIYDHAY--F--WP-HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQR------MSAYISL-NTMGVS 127 (259)
Q Consensus 60 ~~~vi~De~y--~--~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~------~~~~~~~-~~~~~~ 127 (259)
|++||+||+| | .. ....+....+++++++||||.||++|+|+||++++ +++.+. +...... ...+++
T Consensus 207 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (394)
T PRK06836 207 PIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN-PEMEDADDLVAALVFANRILGFVNAP 285 (394)
T ss_pred CeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecC-HHHhhhHHHHHHHHHHhhccccccCC
Confidence 9999999999 2 21 12222234568999999999999999999999998 566442 1111121 124678
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCch
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREED 207 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (259)
++.|.++..++++ . ..++.++++++.+.+.|+.++ +.+..+.+|+|+|+.++..+.
T Consensus 286 ~~~q~~~~~~l~~-----~-----~~~~~~~~~r~~l~~~L~~~g--------------~~~~~~~gg~~~~~~~~~~~~ 341 (394)
T PRK06836 286 ALMQRVVAKCLDA-----T-----VDVSIYKRNRDLLYDGLTELG--------------FECVKPQGAFYLFPKSPEEDD 341 (394)
T ss_pred HHHHHHHHHHhCC-----h-----HHHHHHHHHHHHHHHHHHhCC--------------CEeecCCceEEEEEeCCCCCH
Confidence 8899999888873 1 125678888999999998753 556688899999998876444
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
..+.+.|+++||.++||..|+. .+++||+++.+++++++++++|++++++
T Consensus 342 ~~~~~~l~~~gv~v~~g~~f~~-~~~iRi~~~~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 342 VAFCEKAKKHNLLLVPGSGFGC-PGYFRLSYCVDTETIERSLPAFEKLAKE 391 (394)
T ss_pred HHHHHHHHhCCEEEECchhcCC-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4455677789999999999975 4899999988999999999999999864
No 80
>PLN02397 aspartate transaminase
Probab=100.00 E-value=7.1e-34 Score=249.52 Aligned_cols=235 Identities=13% Similarity=0.058 Sum_probs=177.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC---CCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .|++|++.+++.+. ++++++++++||||||.+++ ++|+++|+
T Consensus 149 ~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~ 228 (423)
T PLN02397 149 NPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNH 228 (423)
T ss_pred CCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 6999999999999988752 36778887776653 56789899999999999993 78899999
Q ss_pred EEEeeccc--c--CC---CCCCC---CCCCCCeEEEeccccccCCCcceEEEEE--ecCHHHHHHH----HHhhhhhcCC
Q 024997 62 KSIYDHAY--F--WP---HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAV--IKDEAVYQRM----SAYISLNTMG 125 (259)
Q Consensus 62 ~vi~De~y--~--~~---~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~--~~~~~~~~~~----~~~~~~~~~~ 125 (259)
+||+||+| | +. ...++ ....+++|+++||||+|+++|||+||++ ++++++++.+ .........+
T Consensus 229 ~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (423)
T PLN02397 229 LPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSN 308 (423)
T ss_pred EEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 99999999 3 21 11121 1234579999999999999999999985 4335665543 3444444556
Q ss_pred CCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 126 VSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
++.+.|.++..+++... .....+++++.++.++++++.+.+.|++++. .. .+.+..|+||+|+|++++
T Consensus 309 ~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~-~~---------~~~~~~p~gg~fl~~~l~- 377 (423)
T PLN02397 309 PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGS-PG---------DWSHITKQIGMFSFTGLN- 377 (423)
T ss_pred CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC---------CCCcccCCceEEEecCCC-
Confidence 78889999988887310 0001123677888999999999999997631 00 145568999999999884
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
.+++..+++++||.+.+ .+ |++++. +.+++++++++|++++.
T Consensus 378 --~~~~~~Ll~~~~V~v~~-------~~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 378 --KEQVDRMTKEYHIYMTR-------DG--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred --HHHHHHHHHhCCEEECC-------CC--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 57899999999999973 12 999984 99999999999999874
No 81
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-33 Score=242.41 Aligned_cols=229 Identities=17% Similarity=0.239 Sum_probs=180.2
Q ss_pred CCCcccchhhhhhccCccc-----ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcC--CCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-----KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKG--PYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~--~~~~vi~De~ 68 (259)
+|+|+.|...+...|..+. .+.+|++.+++.+++++++++++|||||||.+++ ++++. +|+++|+||+
T Consensus 112 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~ 191 (359)
T PRK03158 112 EPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEA 191 (359)
T ss_pred CCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECc
Confidence 5999999999988887652 3567888898888888899999999999999994 45554 5999999999
Q ss_pred c--c--CCCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 69 Y--F--WPHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 69 y--~--~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
| | .+.... ..+..+++++++||||.||++|+|+||++++ +++++.+..... .++++.+.|.++..+++
T Consensus 192 y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~-- 266 (359)
T PRK03158 192 YYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS-EELIEKLNIARP--PFNTTRIAQYAAIAALE-- 266 (359)
T ss_pred hHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHhc--
Confidence 9 2 211111 1134568999999999999999999999999 699999987665 36789999999999997
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
..+++++.++.++++++.+.+.|++++ +.. .+.+|+|+|++++..+.++...++ ++||.+
T Consensus 267 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------~~~-~~~~g~~i~~~~~~~~~~~~~~l~-~~gv~v 326 (359)
T PRK03158 267 ----DQAFLKECVEKNAEGLEQYYAFCKEYG--------------LFY-YPSQTNFIFVDTGRDANELFEALL-KKGYIV 326 (359)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------Cee-CCCcCcEEEEECCCCHHHHHHHHH-HCCeEE
Confidence 345777778888888888888887653 333 345678999998643345555554 689999
Q ss_pred ecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 222 REGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+||+.|+. ++++||+++ ++++++.++++|++++
T Consensus 327 ~~g~~f~~-~~~iRi~~~-~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 327 RSGAALGF-PTGVRITIG-LKEQNDKIIELLKELL 359 (359)
T ss_pred eeCCCCCC-CCeEEEecC-CHHHHHHHHHHHHHhC
Confidence 99999974 589999995 6888899999888763
No 82
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.1e-33 Score=246.91 Aligned_cols=234 Identities=15% Similarity=0.082 Sum_probs=177.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC---CCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|+.|..+++..|.++. .|++|++.|++.+. +++++++++|||||||.+++ ++|+++|+
T Consensus 127 ~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~ 206 (396)
T PRK09257 127 DPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGL 206 (396)
T ss_pred CCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 6999999999999988762 36788888888763 34678788999999999993 78999999
Q ss_pred EEEeeccc--cCCC----CCCC---CCCCCCeEEEeccccccCCCcceEEEEEe--cCHHH----HHHHHHhhhhhcCCC
Q 024997 62 KSIYDHAY--FWPH----FAPI---PAPADEELMIFTISKLTGHAGSRFGWAVI--KDEAV----YQRMSAYISLNTMGV 126 (259)
Q Consensus 62 ~vi~De~y--~~~~----~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~----~~~~~~~~~~~~~~~ 126 (259)
+||+||+| |... ..++ ....+++|+++||||+|+++|+|+||+++ ++++. +.++.........++
T Consensus 207 ~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
T PRK09257 207 IPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNP 286 (396)
T ss_pred EEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCC
Confidence 99999999 3211 1111 12356899999999999989999999984 33443 334444444445667
Q ss_pred CHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 127 SRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+.+.|.++..+++... .+..++++++.++.++++++.+.+.|+.+.. + ..+.+..|++|+|+|++++
T Consensus 287 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~-------~---~~~~~~~p~gg~~~w~~l~-- 354 (396)
T PRK09257 287 PAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGP-------S---RDFDFIARQRGMFSYSGLT-- 354 (396)
T ss_pred cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------C---CCcccccccceEEEecCCC--
Confidence 8999999998887310 0001457788899999999999999987531 0 0144568999999999884
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l 256 (259)
.+++.++++++||.+.|. + ||+++. +++++++++++|++++
T Consensus 355 -~~~~~~l~~~~~V~~~p~-------~--ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 355 -PEQVDRLREEFGVYAVGS-------G--RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred -HHHHHHHHHcCCEEEcCC-------C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence 577888889999999871 2 999985 9999999999998764
No 83
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.8e-34 Score=244.63 Aligned_cols=223 Identities=17% Similarity=0.210 Sum_probs=175.4
Q ss_pred CCCcccchhhhhhccCccc-----ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDY-----KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De 67 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++++++++++||||||||.+++ ++|++++ ++|+||
T Consensus 112 ~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe 190 (366)
T PRK01533 112 GATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDE 190 (366)
T ss_pred CCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEc
Confidence 5999999999999988763 3568889999888888899999999999999983 4555555 677899
Q ss_pred cc--c--CCCC-CCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 68 AY--F--WPHF-APIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 68 ~y--~--~~~~-~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
+| | .... ..+. ...+++|+++||||+||++|+|+||++++ +++++.+..... .++++.+.|.++..+++
T Consensus 191 ~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~- 266 (366)
T PRK01533 191 AYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELIEKLNVVRL--PFNVSSLAQKAATIAFG- 266 (366)
T ss_pred cHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHHHHHHHhcC--CCCcCHHHHHHHHHHhC-
Confidence 99 3 1111 1111 34578999999999999999999999999 799999987654 47899999999999997
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCee
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKII 220 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 220 (259)
...+....++.++++++++...++.++ +.+.++ .|.|+|++++. .+.+.+.|.++||.
T Consensus 267 -----~~~~~~~~~~~~~~~r~~~~~~l~~~g--------------~~~~~~-~~nf~~~~~~~--~~~~~~~l~~~GI~ 324 (366)
T PRK01533 267 -----DDEFIEEIVRVNTEGLRQYESFCKENE--------------IPFYQS-QTNFIFLPVEN--GGEIYEACAHAGFI 324 (366)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CccCCC-cCcEEEEeCCC--HHHHHHHHHHCCcE
Confidence 346777778888888888888887653 333344 57799999863 34455666689999
Q ss_pred eecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 221 GREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 221 ~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
|++ | ++++|||+ .+.++.+.+++.|+++++
T Consensus 325 Vr~---~---~~~iRis~-~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 325 IRP---F---PNGVRITV-GTREQNEGVISVLQQHFE 354 (366)
T ss_pred Ecc---C---CCceEEeC-CCHHHHHHHHHHHHHHHH
Confidence 998 4 37899999 556888888888887764
No 84
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.5e-33 Score=262.27 Aligned_cols=240 Identities=15% Similarity=0.140 Sum_probs=184.5
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCC-CceEEEEcCCC-CCChhhHH--------HhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSD-THLVEFVTAPN-NPDGQMNK--------AVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~-~~~~i~i~~p~-NPtG~~~~--------~la~~~~~~ 62 (259)
+|+|+.|...++..|.++ .+|.+|.+.|++.+++ ..++++++||| ||||.+++ ++|+++|++
T Consensus 785 ~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~ 864 (1082)
T PLN02672 785 AGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGAR 864 (1082)
T ss_pred CCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCE
Confidence 599999999999998876 2578888889998865 45678999997 99999993 789999999
Q ss_pred EEeeccc----cCCCC---CCCC----C-----CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCC
Q 024997 63 SIYDHAY----FWPHF---APIP----A-----PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGV 126 (259)
Q Consensus 63 vi~De~y----~~~~~---~~~~----~-----~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~ 126 (259)
||+||+| |.... .++. . ...++++++||||.|+++|+|+||++++++++++.+...... .++
T Consensus 865 VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~--s~~ 942 (1082)
T PLN02672 865 VIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGL--SRP 942 (1082)
T ss_pred EEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhh--cCC
Confidence 9999999 32211 1111 1 123799999999999999999999999865699999876442 333
Q ss_pred CHHHHHHHHHHHHHHH--hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 127 SRECQLRAFKLLKVVL--EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
..+.|.++..++.... .+....++.+.++.++++++.+.+.|+..+ +.+.+|++|+|+|++++.
T Consensus 943 ~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G--------------i~v~~PeGGFfLwl~l~~ 1008 (1082)
T PLN02672 943 HSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACG--------------WDVLEPQGGISMVAKPSA 1008 (1082)
T ss_pred CcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeEecCCcEEEEEEEccc
Confidence 4455665555443110 011234677788889999999999999764 566789999999997631
Q ss_pred ------------------C-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 205 ------------------E-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ------------------~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
. +.++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++
T Consensus 1009 ~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~-~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1009 YLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI-PGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC-CCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 346777788778999999988775 589999999888999999999998764
No 85
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-33 Score=238.82 Aligned_cols=229 Identities=21% Similarity=0.307 Sum_probs=177.1
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .|.+|++.+++.+++ ++++++++|||||||.+++ +++++++.++|+||+
T Consensus 107 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~ 186 (351)
T PRK14807 107 HPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEA 186 (351)
T ss_pred CCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCc
Confidence 5999999999998887752 367888899988864 8899999999999999983 778887888999999
Q ss_pred c--c-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 69 Y--F-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 69 y--~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
| | +....+.....+++|+++||||.||++|+|+||++++ +++++++...... ++++.+.|.++..+++.
T Consensus 187 y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~-~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~----- 258 (351)
T PRK14807 187 YFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN-ENILKYLNLVKSP--YNINSLSQVIALKVLRT----- 258 (351)
T ss_pred chhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecC-HHHHHHHHHccCC--CCcCHHHHHHHHHHHhH-----
Confidence 9 3 2222122234578999999999999999999999998 7999999876653 66789999999999873
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCC
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGK 225 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~ 225 (259)
.++++..+.++++++.+.+.|+++++ +.+ .+.+|+|+|++++. .+.+.+.|.++||.++++.
T Consensus 259 --~~~~~~~~~~~~~r~~l~~~l~~~~g-------------~~~-~~~~~~~~~i~~~~--~~~~~~~l~~~gV~v~~~~ 320 (351)
T PRK14807 259 --GVLKERVNYILNERERLIKELSKIPG-------------IKV-YPSKTNFILVKFKD--ADYVYQGLLERGILVRDFS 320 (351)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhCCC-------------cEE-CcCCccEEEEEcCC--HHHHHHHHHHCCEEEEECC
Confidence 25667777888899999888876543 333 35568899999873 4556666667899999865
Q ss_pred cccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 226 KFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 226 ~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.+...++++||+++. +++.+.+++.|++++
T Consensus 321 ~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 321 KVEGLEGALRITVSS-CEANDYLINGLKELL 350 (351)
T ss_pred CCCCCCCeEEEEcCC-HHHHHHHHHHHHHhh
Confidence 433346899999964 455666677776654
No 86
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.5e-33 Score=240.96 Aligned_cols=229 Identities=23% Similarity=0.314 Sum_probs=180.2
Q ss_pred CCCcccchhhhhhccCcc------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVD------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y 69 (259)
+|+|+.|...++..|.++ .+|.+|++.|++.++++++++++++||||||.+++ ++|+++|+++|+||+|
T Consensus 118 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y 197 (361)
T PRK00950 118 TPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAY 197 (361)
T ss_pred CCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECch
Confidence 589999998888888765 23678888999888778889899999999999983 7889999999999999
Q ss_pred --cC-CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCC
Q 024997 70 --FW-PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGG 146 (259)
Q Consensus 70 --~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 146 (259)
|. .....+....+++++++||||++|++|+|+||++++ +++++.+.+.... ++.+++.|.++..+++ .
T Consensus 198 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~a~~~l~------~ 268 (361)
T PRK00950 198 VEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP-EWLIDYYMRAKTP--FSLTRLSQAAAIAALS------D 268 (361)
T ss_pred hhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHhc------C
Confidence 32 112222233467999999999999999999999999 6999988877654 4578899998888887 3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCc
Q 024997 147 NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~ 226 (259)
.+++++.++.++++++.+.+.|+ +.. .+.+++|+|++++..+.+.+.+.|.++||.++||..
T Consensus 269 ~~~~~~~~~~~~~~r~~l~~~l~-----------------~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~ 330 (361)
T PRK00950 269 KEYIEKSIEHGIKSREYLYNELP-----------------FKV-YPSEANFVLVDVTPMTAKEFCEELLKRGVIVRDCTS 330 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC-----------------eeE-CCCcceEEEEECCCCCHHHHHHHHHHCCEEEeeCCc
Confidence 45677777788888777766664 111 356788999999554444455555578999999998
Q ss_pred ccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 227 FRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 227 f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
|+. +++++|||++ +.++++++++.|+++++
T Consensus 331 f~~~~~~~lRis~~-~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 331 FRGLGDYYIRVSIG-TFEENERFLEILKEIVE 361 (361)
T ss_pred cCCCCCCeEEEECC-CHHHHHHHHHHHHHHhC
Confidence 864 4689999996 66789999999988764
No 87
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-32 Score=234.56 Aligned_cols=228 Identities=14% Similarity=0.156 Sum_probs=177.7
Q ss_pred CCCcccchhhhhhccCcccc------cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDYK------FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y 69 (259)
+|+|+.|...++..|.++.. |.+|++.+ .+++++++++|||||||.+++ ++|+ ++.++|+||+|
T Consensus 103 ~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y 177 (349)
T PRK07908 103 HPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAF 177 (349)
T ss_pred CCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcc
Confidence 59999999999988887643 45555433 457889999999999999994 6675 47788899999
Q ss_pred --c-CCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 70 --F-WPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 70 --~-~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
| .....++. ...+++++++||||.||++|+|+||++++ +++++.+...... +..+++.|.++..+++. .
T Consensus 178 ~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~----~ 250 (349)
T PRK07908 178 ADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTRGRAH--WPVGTLQLEAIAACCAP----R 250 (349)
T ss_pred hhhccCCccccccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHHhcCCC--CCccHHHHHHHHHHhcc----c
Confidence 3 22222222 23457999999999999999999999998 7999998876553 55777888877776652 2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCC
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGK 225 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~ 225 (259)
...++.+.++.++++++.+.+.|++++ +....|.+|+|+|++++. .+.+.+.|+++||.++||.
T Consensus 251 ~~~~~~~~~~~~~~~r~~l~~~L~~~~--------------~~~~~p~~g~~~~~~~~~--~~~~~~~l~~~gI~v~~g~ 314 (349)
T PRK07908 251 AVAEAAADAARLAADRAEMVAGLRAVG--------------ARVVDPAAAPFVLVRVPD--AELLRKRLRERGIAVRRGD 314 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCC--------------cEeccCCCceEEEEECCc--HHHHHHHHHhCCEEEEECC
Confidence 446778889999999999999998752 445677899999999975 5677777888999999999
Q ss_pred cccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 226 KFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 226 ~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.|+. +++++|||+ .++++++.+++.|++++.
T Consensus 315 ~f~~~~~~~vRis~-~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 315 TFPGLDPDYLRLAV-RPRAEVPVLVQALAEILK 346 (349)
T ss_pred CCCCCCCCeEEEEe-CCCccHHHHHHHHHHHHh
Confidence 9964 468999999 466778888888877764
No 88
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-32 Score=236.65 Aligned_cols=230 Identities=18% Similarity=0.240 Sum_probs=177.1
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCC-CcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGP-YAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~-~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .|.+|+++|++ .+++++++|||||||.+++ ++++.+ ++++|+||+
T Consensus 108 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~ 183 (353)
T PRK05387 108 DITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEA 183 (353)
T ss_pred CCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCc
Confidence 5999999999998887652 35677777753 3567899999999999994 666554 999999999
Q ss_pred c--cCC-CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh-cCCCCHHHHHHHHHHHHHHHhc
Q 024997 69 Y--FWP-HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-TMGVSRECQLRAFKLLKVVLED 144 (259)
Q Consensus 69 y--~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~ 144 (259)
| |.. ...++....+++++++||||.||++|+|+||++++ +++++++....... .++++.+.|.++..+++
T Consensus 184 y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~----- 257 (353)
T PRK05387 184 YVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH-PELIEALNRVKNSFNSYPLDRLAQAGAIAAIE----- 257 (353)
T ss_pred ccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC-HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc-----
Confidence 9 422 11222234567999999999999999999999998 79999998876542 45788999999988886
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecC
Q 024997 145 GGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREG 224 (259)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g 224 (259)
..+++++.+++++++++.+.+.|++++ +.. .+.+++|+|++++..+.+.+.+.|.++||.+++.
T Consensus 258 -~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 321 (353)
T PRK05387 258 -DEAYFEETRAKVIATRERLVEELEALG--------------FEV-LPSKANFVFARHPSHDAAELAAKLRERGIIVRHF 321 (353)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeE-CCCcCcEEEEECCCCCHHHHHHHHHHCCEEEEEC
Confidence 335677889999999999999998764 332 4567889999987555455555566889999852
Q ss_pred CcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 225 KKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 225 ~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
... ...+++|+|++ ++++++.++++|++++.+
T Consensus 322 ~~~-~~~~~iRis~~-~~~~~~~~~~~L~~~~~~ 353 (353)
T PRK05387 322 NKP-RIDQFLRITIG-TDEEMEALVDALKEILAK 353 (353)
T ss_pred CCC-CCCCeEEEEeC-CHHHHHHHHHHHHHHhhC
Confidence 211 13579999996 668999999999998753
No 89
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-32 Score=227.17 Aligned_cols=239 Identities=18% Similarity=0.230 Sum_probs=195.0
Q ss_pred CCCcccchhhhhhc-cCcc--------cccccChhhhcccC------CCCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDYF-ESVD--------YKFEGEANLWGNAS------SDTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~-g~~~--------~~~~~d~~~l~~~~------~~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|.||.+...++.. |+++ ++|+++.++||+++ ..+.+.++++|||||.|.+++ +.|.
T Consensus 177 tPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~ 256 (471)
T KOG0256|consen 177 TPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFAS 256 (471)
T ss_pred CCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHh
Confidence 58899988777765 5544 56899999898876 347888999999999999993 7789
Q ss_pred CCCcEEEeeccc----cC-CCCCCCC------C-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCC
Q 024997 58 GPYAKSIYDHAY----FW-PHFAPIP------A-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMG 125 (259)
Q Consensus 58 ~~~~~vi~De~y----~~-~~~~~~~------~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~ 125 (259)
++|+++|+||+| |+ ..+.++. . ..+++-++.|+||-||+||+|+|.|+..++++..+..+..+. ..
T Consensus 257 ~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf--~~ 334 (471)
T KOG0256|consen 257 RKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSF--GL 334 (471)
T ss_pred hcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhc--cC
Confidence 999999999999 53 3343332 1 567899999999999999999999999988899888887765 66
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 126 VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+|+..|+.++.+|.+. .=.+.++.+..++++.+.+++.+.|++++ +.++...+|+|+|+++...
T Consensus 335 vSs~tQ~~la~LLSD~--~f~~~yl~en~~Rl~~rh~~~~~gLk~lg--------------I~cl~s~AGlF~wvDlr~l 398 (471)
T KOG0256|consen 335 VSSQTQYLLASLLSDE--EFTREYLRENNKRLRIRHRYIVEGLKALG--------------IPCLKSNAGLFCWVDLRKL 398 (471)
T ss_pred CcHHHHHHHHHHhchH--HHHHHHHHHHHHHHHHHHHHHHhhHHhcC--------------CceeecCCeeEEEEEhHHh
Confidence 8999999999999741 11244577888899999999999999887 7888999999999998765
Q ss_pred --------chHHHHHHHHHcCeeeecCCccc-CCCCeEEEEeecChhh-HHHHHHHHHHHhh
Q 024997 206 --------EDKDCYGILKAAKIIGREGKKFR-AEARFVRLSLLKSQDD-FDLLLHRLDELIS 257 (259)
Q Consensus 206 --------~~~~~~~ll~~~gi~~~~g~~f~-~~~~~~Ris~~~~~~~-~~~~~~~l~~~l~ 257 (259)
..+....++.+-++.+.||++|. ..+||+|++|+...++ ++-+++||+.++.
T Consensus 399 L~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 399 LTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred cCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 24667778877799999999887 5679999999995555 5559999999875
No 90
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-32 Score=237.22 Aligned_cols=230 Identities=19% Similarity=0.281 Sum_probs=172.4
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----Hhhc--CCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLK--GPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~--~~~~~vi~De 67 (259)
+|+|+.|...++..|.++. .+++|+++|++.+++++++++++|||||||.+++ ++++ +.+.+||+||
T Consensus 119 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De 198 (371)
T PRK05166 119 YPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDE 198 (371)
T ss_pred CCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 5899999999988887762 3577888999888778899999999999999993 3333 2488999999
Q ss_pred cc--cC--CCCCCC----CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 68 AY--FW--PHFAPI----PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 68 ~y--~~--~~~~~~----~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
+| |. ....+. ....+++|+++||||.||++|+|+||++++++++++.+..... .++++.+.|.++..++.
T Consensus 199 ~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~ 276 (371)
T PRK05166 199 AYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT--PFNVNGAAQAAALAALD 276 (371)
T ss_pred cHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc--CCCCCHHHHHHHHHHhc
Confidence 99 32 111111 1234579999999999999999999988754789888876554 36789999988888887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
...++++.++.++++++.+.+.|+..+ +. ..+.+|+|+|++++..+.++...++ ++||
T Consensus 277 ------~~~~~~~~~~~~~~~r~~l~~~L~~~g--------------~~-~~p~~g~fl~~~~~~~~~~l~~~l~-~~gi 334 (371)
T PRK05166 277 ------DEEHLAKGVALALAERERLKKELAEMG--------------YR-IAPSRANFLFFDARRPASAVAEALL-RQGV 334 (371)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHCc--------------Ce-eCCCcCCEEEEeCCCCHHHHHHHHH-HCCe
Confidence 346788888999999999999998753 32 2456789999998654344554444 6799
Q ss_pred eeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 220 IGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 220 ~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.++||..++. .+++||+++. +++.+..++.|++++
T Consensus 335 ~v~p~~~~~~-~~~iRi~~~~-~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 335 IVKPWKQPGF-ETFIRVSIGS-PEENDHFVAALDKVL 369 (371)
T ss_pred EEecCCCCCC-CCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 9999986543 6899999975 334444444444443
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-32 Score=234.49 Aligned_cols=238 Identities=17% Similarity=0.230 Sum_probs=185.8
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~v 63 (259)
+|+|+.|...++..|..+. +|.+|++.+++.++++++++++++||||||.+++ ++|+++|+++
T Consensus 114 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~i 193 (380)
T PRK06225 114 DPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFL 193 (380)
T ss_pred CCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEE
Confidence 5899999888888877642 3567888999988888999999999999999872 7899999999
Q ss_pred Eeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 64 IYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 64 i~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
|+||+| |........ ...+++++++||||.+|++|+|+||++++ +++++.+..... ...+++.+.|.++..+++.
T Consensus 194 i~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~ 271 (380)
T PRK06225 194 LHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV 271 (380)
T ss_pred EEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC-HHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc
Confidence 999998 322111111 13467999999999999999999999999 799999887653 3577889999998888873
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcC
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAK 218 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~g 218 (259)
.+.++++.++.++++++.+.+.|++++++.+ ...+.+|+|+|++++.. +...+.+.|.++|
T Consensus 272 -----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~------------~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~g 334 (380)
T PRK06225 272 -----KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFL------------PVYPSHGNMMVIDISEAGIDPEDLVEYLLERK 334 (380)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHHHhCcCCcc------------ccCCCCCeEEEEEcccccCCHHHHHHHHHHCC
Confidence 4566777777788888888888887543111 12456788889998642 4444555555789
Q ss_pred eeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 219 IIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 219 i~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
|.++||..|+. +.+++|+|++.+++++++++++|+++++
T Consensus 335 i~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~ 375 (380)
T PRK06225 335 IFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVE 375 (380)
T ss_pred EEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 99999987754 3579999998888999999999999876
No 92
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-32 Score=237.32 Aligned_cols=226 Identities=15% Similarity=0.201 Sum_probs=172.8
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----Hhhc--CCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLK--GPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~--~~~~~vi~De 67 (259)
+|+|+.|...++..|.++. .|.+|.+.+++. .++++++++||||||||.+++ ++++ ++++++|+||
T Consensus 126 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDE 204 (370)
T PRK09105 126 DPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDE 204 (370)
T ss_pred CCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEEC
Confidence 6999999999999988752 356777888766 456889999999999999993 3332 3589999999
Q ss_pred cc--cCCC--CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 68 AY--FWPH--FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 68 ~y--~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
+| |... ...+.+..+++++++||||.||++|+|+||++++ +++++.+... ....++.+.|.++..+++
T Consensus 205 aY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~~l~~~---~~~~~~~~~~~aa~~~L~---- 276 (370)
T PRK09105 205 AYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLAKLARF---GHNPLPVPAAAAGLASLR---- 276 (370)
T ss_pred chHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC-HHHHHHHHhc---CCCCcCHHHHHHHHHHHh----
Confidence 99 4321 1122234678999999999999999999999999 7999988876 235588888998888887
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeec
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~ 223 (259)
.+.++++.++.++++++.+.+.|+.++ +.+.++++++| +++++..+.++...++ ++||.+
T Consensus 277 --~~~~~~~~~~~~~~~r~~l~~~L~~~g--------------~~~~~~~~~f~-~~~~~~~~~~l~~~L~-~~gI~v-- 336 (370)
T PRK09105 277 --DPKLVPQRRAENAAVREDTIAWLKKKG--------------YKCTPSQANCF-MVDVKRPAKAVADAMA-KQGVFI-- 336 (370)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CCcCCCCCcEE-EEeCCCCHHHHHHHHH-HCCcEE--
Confidence 346888889999999999999998754 33446666665 5777633345555555 679998
Q ss_pred CCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 224 GKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 224 g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
|..|+..++++||+++ ++++++.+++.|++++
T Consensus 337 ~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 337 GRSWPIWPNWVRVTVG-SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ecCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHh
Confidence 4456544689999996 4677888888888765
No 93
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-33 Score=238.23 Aligned_cols=229 Identities=17% Similarity=0.223 Sum_probs=180.8
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCC-CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .|.+|++.|++.+. .+++++++++||||||.+++ ++++..+.++|+||+
T Consensus 112 ~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~ 191 (356)
T PRK04870 112 EPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEA 191 (356)
T ss_pred CCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECC
Confidence 5999999999999988762 36788899998885 58899999999999999983 555545889999999
Q ss_pred c--cCC-CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 69 Y--FWP-HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 69 y--~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
| |.. .........+++++++|||| ++++|+|+||++++ +++++++..... .++++.+.|.++..+++.
T Consensus 192 y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~-~~~i~~~~~~~~--~~~~~~~~q~~a~~~l~~----- 262 (356)
T PRK04870 192 YQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH-PAWIAELDKVRP--PYNVNVLTQATALFALEH----- 262 (356)
T ss_pred chhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC-HHHHHHHHHccC--CCcCCHHHHHHHHHHHhC-----
Confidence 9 321 11111134467999999999 89999999999999 699999887663 356888999988888762
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCC
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGK 225 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~ 225 (259)
.+++++.++.++++++.+.+.|+.+++ +.. .+.+|+|+|++++ +.+.+...|+++||.+++|.
T Consensus 263 -~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~-~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v~~~~ 325 (356)
T PRK04870 263 -VDVLDAQAAQLRAERTRLAAALAALPG-------------VTV-FPSAANFILVRVP--DAAAVFDGLKTRGVLVKNLS 325 (356)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCCC-------------cEE-CCCCCeEEEEECC--CHHHHHHHHHHCCEEEEECC
Confidence 345778888999999999999987643 322 4567789999987 34556677788999999999
Q ss_pred cccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 226 KFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 226 ~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.|+. .++++|||++ ++++.+..++.|++++
T Consensus 326 ~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 326 GMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred CCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 9864 4689999996 5777888888887754
No 94
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-32 Score=234.20 Aligned_cols=230 Identities=20% Similarity=0.279 Sum_probs=175.8
Q ss_pred CCCcccchhhhhhccCcccc-----cccChhhhcccC-CCCceEEEEcCCCCCChhhHH-----Hhhc--CCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDYK-----FEGEANLWGNAS-SDTHLVEFVTAPNNPDGQMNK-----AVLK--GPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~-----~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~-----~la~--~~~~~vi~De 67 (259)
+|+||.|...++..|.++.. ...|++.+.+.+ ++++++++++|||||||.+++ ++++ ++|++||+||
T Consensus 115 ~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE 194 (369)
T PRK08153 115 LGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDE 194 (369)
T ss_pred CCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeC
Confidence 59999999988888876632 245566666555 467899999999999999983 3332 2489999999
Q ss_pred cc--c--CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 68 AY--F--WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 68 ~y--~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
+| | .....++....+++++++||||+||++|+|+||++++ +++++.+.+.... ++++++.|.++..+++
T Consensus 195 ~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~---- 267 (369)
T PRK08153 195 AYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIKAFDKVRNH--FGMNRIAQAAALAALK---- 267 (369)
T ss_pred chhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecC-HHHHHHHHHhhcC--CCCCHHHHHHHHHHhc----
Confidence 99 3 2223333334568999999999999999999999999 7999999887653 6789999999999997
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeee
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIG 221 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~ 221 (259)
...++++.++.++++++.+.+.|+..+ +. ..|.+++|+|++++.. ..+.+.+.+.++||.+
T Consensus 268 --~~~~~~~~~~~~~~~r~~~~~~L~~~g--------------~~-~~p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v 330 (369)
T PRK08153 268 --DQAYLAEVVGKIAAARDRIAAIARANG--------------LT-PLPSATNFVAIDCGRDGAFARAVLDGLIARDIFV 330 (369)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------Cc-cCCCcCcEEEEECCCCcccHHHHHHHHHHCCeEE
Confidence 346788889999999999999998654 22 2467889999998532 2334444455789999
Q ss_pred e-cCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 222 R-EGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 222 ~-~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+ |+.. ...+++|||++ ++++++..++.|+++++
T Consensus 331 ~~p~~~--~~~~~iRis~~-~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 331 RMPGVA--PLDRCIRVSCG-PDEELDLFAEALPEALE 364 (369)
T ss_pred eeCCCC--CCCCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 5 6542 23579999996 68899999999988875
No 95
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.1e-32 Score=233.31 Aligned_cols=224 Identities=18% Similarity=0.241 Sum_probs=177.7
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccc--c
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAY--F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y--~ 70 (259)
+|+|+.|...++..|.++..+. |++.|++.+ ++++++++++||||||.+++ ++|+++|++||+||+| |
T Consensus 93 ~p~y~~~~~~~~~~g~~~~~~~-d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 93 APTYSEYARAWRAAGHEVVELP-DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred CCCcHHHHHHHHHcCCEEEEeC-CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 5999999999999998876666 888898888 45678899999999999993 6788999999999999 3
Q ss_pred CCCC--CCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 WPHF--APIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.+.. ....+..+++++++||||.+|++|+|+||++++ +++++.+...... +.++.+.|.++..+++ ..+
T Consensus 171 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~------~~~ 241 (330)
T TIGR01140 171 TPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH-PALLARLREALGP--WTVNGPARAAGRAALA------DTA 241 (330)
T ss_pred CCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCC-HHHHHHHHhcCCC--CCchHHHHHHHHHHHh------chH
Confidence 3221 111123578999999999999999999999999 6999998877643 5678899999999987 335
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
+.++.++.++++++.+.+.|+.++. ++ ..+.+|+|+|++++. ..++..+++ ++||.++||..|+
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~-~~~~~~~f~~~~~~~-~~~l~~~l~-~~gi~v~pg~~f~ 305 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGG-------------LE-VVGGTALFLLVRTPD-AAALHEALA-RRGILIRDFDNFP 305 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-------------ce-ECCCCCeEEEEEcCC-HHHHHHHHH-HCCEEEEECCCCC
Confidence 6677889999999999999997653 22 245678999999875 345555555 6899999999996
Q ss_pred C-CCCeEEEEeecChhhHHHHHHHH
Q 024997 229 A-EARFVRLSLLKSQDDFDLLLHRL 252 (259)
Q Consensus 229 ~-~~~~~Ris~~~~~~~~~~~~~~l 252 (259)
. +++++||+++.+.++ +.++++|
T Consensus 306 ~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 306 GLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred CCCCCEEEEEecCHHHH-HHHHHhh
Confidence 3 568999999775544 6666655
No 96
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-32 Score=230.97 Aligned_cols=223 Identities=22% Similarity=0.285 Sum_probs=167.3
Q ss_pred CCCcccchhhhhhccCcccccccChhh-hcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc--cC-
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANL-WGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY--FW- 71 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~-l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y--~~- 71 (259)
+|+|+.|..+++..|.++..+..|.+. +.......+++++++|||||||.+++ +++ +++++||+||+| |.
T Consensus 103 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~ 181 (335)
T PRK14808 103 PPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG 181 (335)
T ss_pred CCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC
Confidence 599999999999999987554433211 10101135688999999999999994 566 579999999999 42
Q ss_pred CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHH
Q 024997 72 PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFE 151 (259)
Q Consensus 72 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 151 (259)
....+.....+++++++||||+||++|+|+||++++ +++++.+..... .++++.+.|.++..+++. .++..
T Consensus 182 ~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~-~~~~~~l~~~~~--~~~~~~~~q~a~~~~l~~------~~~~~ 252 (335)
T PRK14808 182 ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS-EKFIDAYNRVRL--PFNVSYVSQMFAKVALDH------REIFE 252 (335)
T ss_pred CchHHHHHhCCCEEEEEechhhccCcccceEEEEeC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHHhC------HHHHH
Confidence 122121134468999999999999999999999999 699999987663 367889999998888762 34667
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCC
Q 024997 152 FGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
+..+.++++++.+.+.|+.++ +.+.++ .|.|+|+.++..+.+.+.+.+.++||.++. |.
T Consensus 253 ~~~~~~~~~r~~l~~~L~~~g--------------~~~~~~-~g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~---~~--- 311 (335)
T PRK14808 253 ERTKFIVEERERMKSALREMG--------------YRITDS-RGNFVFIFMEKEEKERLLEHLRAKNIAVRS---FR--- 311 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHCC--------------CEECCC-CCeEEEEeCCCccHHHHHHHHHHCCeEEEE---CC---
Confidence 777888888899999898754 444455 567889998754445666777789999995 42
Q ss_pred CeEEEEeecChhhHHHHHHHHHHH
Q 024997 232 RFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 232 ~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+++|||++. +++.+.+++.|+++
T Consensus 312 ~~~Risi~~-~~~~~~~~~~l~~~ 334 (335)
T PRK14808 312 EGVRITIGK-REENDMILKELEVF 334 (335)
T ss_pred CCeEEecCC-HHHHHHHHHHHHhh
Confidence 689999954 67778888877653
No 97
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-32 Score=236.99 Aligned_cols=240 Identities=13% Similarity=0.115 Sum_probs=173.8
Q ss_pred CCCcccchhhhh-hccCccc-------ccccChhhhcccCC----CCceEEEEcCCCCCChhhHH--------Hhhc---
Q 024997 1 MPFYPLYQEQTD-YFESVDY-------KFEGEANLWGNASS----DTHLVEFVTAPNNPDGQMNK--------AVLK--- 57 (259)
Q Consensus 1 ~P~y~~~~~~~~-~~g~~~~-------~~~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~~--------~la~--- 57 (259)
+|+|+.|...+. ..|.++. .+++|+++|++.++ +.+++++++|||||||.+++ ++|+
T Consensus 100 ~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~ 179 (388)
T PRK08637 100 DHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELA 179 (388)
T ss_pred CCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 699999998754 5676552 24677888887765 56677889999999999983 4443
Q ss_pred --CCCcEEEeeccc--c--CCC-CCC----CCCCCCCe--EEEeccccccCCCcceEEEEEecC-----HHHHHHHHHhh
Q 024997 58 --GPYAKSIYDHAY--F--WPH-FAP----IPAPADEE--LMIFTISKLTGHAGSRFGWAVIKD-----EAVYQRMSAYI 119 (259)
Q Consensus 58 --~~~~~vi~De~y--~--~~~-~~~----~~~~~~~~--i~~~S~SK~~g~~G~R~G~i~~~~-----~~~~~~~~~~~ 119 (259)
+++++||+||+| | .+. ..+ +.+..+++ ++++|+||.++++|+|+||+++++ +++++.+....
T Consensus 180 ~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~ 259 (388)
T PRK08637 180 DAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKV 259 (388)
T ss_pred hcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHH
Confidence 289999999999 3 221 111 11334564 456799999999999999999652 58888876532
Q ss_pred ----hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC
Q 024997 120 ----SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP 195 (259)
Q Consensus 120 ----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (259)
.....++|.+.|.++..+++.. ....++.+.+..++++++.+.+.|+..+. . ..+.+.++++|
T Consensus 260 ~~~~~~~~~~~s~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~r~~~~~~~l~~~~~------~----~~~~~~~~~~g 326 (388)
T PRK08637 260 KGLIRSNISNGPHPSQSAVLRALNSP---EFDKEKQEKFQILKERYEKTKEVLYDGKY------D----DAWQAYPFNSG 326 (388)
T ss_pred HHHhhcccCCCCcHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhhCC------C----CCcccccccce
Confidence 2233578999999999999731 23344556666788888888888875420 0 01455688999
Q ss_pred eeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 196 AYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 196 ~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+|+|++++..+ .+++..+++++||.+.+ + +++++||+++. +.+++++++++|++++++
T Consensus 327 ~~~~~~l~~~~~~~l~~~l~~~~gv~~~~---~--~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 327 YFMCLKLKGVDAEELRVHLLEKYGIGTIA---L--NETDLRIAFSCVEEEDIPELFDSIYKAIKD 386 (388)
T ss_pred EEEEecCChHHHHHHHHHHhhhcceEEEe---c--cCCceEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 99999997433 45566666788998875 2 35789999987 899999999999998864
No 98
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1e-31 Score=232.38 Aligned_cols=232 Identities=17% Similarity=0.238 Sum_probs=182.7
Q ss_pred CCCcccchhhhhhccCcc-----cccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcC--CCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVD-----YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKG--PYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~-----~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~--~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++ .++.+|++.+++.+++++++++++|||||||.+++ ++++. +|+++|+||+
T Consensus 115 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~ 194 (367)
T PRK02731 115 EHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEA 194 (367)
T ss_pred cCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECc
Confidence 589999988888888765 34678889999988888899999999999999983 55554 4999999999
Q ss_pred c--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 69 Y--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 69 y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
| + .. ....+. +..+++++++||||.||++|+|+||++++ +++++.+.+.... ++.+.+.|.++.++++
T Consensus 195 y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~-~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~-- 269 (367)
T PRK02731 195 YAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP-PEIIDALNRVRQP--FNVNSLALAAAVAALD-- 269 (367)
T ss_pred HHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC-HHHHHHHHHccCC--CCCCHHHHHHHHHHhC--
Confidence 8 2 11 111121 34568999999999999999999999999 6999998876543 5678899999999987
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCee
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKII 220 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~ 220 (259)
...++++.++.++++++.+.+.|++.+ +.+. +.+|+|+|++++.. +.+.+.+.|.++||.
T Consensus 270 ----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~-~~~g~~~~i~~~~~~~~~~~~~~L~~~gI~ 330 (367)
T PRK02731 270 ----DDAFVEKSRALNAEGMAWLTEFLAELG--------------LEYI-PSVGNFILVDFDDGKDAAEAYQALLKRGVI 330 (367)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CccC-CCCceEEEEECCCCCCHHHHHHHHHHCCEE
Confidence 345778888899999999999998763 3333 45688999998542 444555556678999
Q ss_pred eecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 221 GREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 221 ~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++++..|+. ++++|+|++ +.++++.+++.|+++++.
T Consensus 331 v~~~~~~~~-~~~iRis~~-~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 331 VRPVAGYGL-PNALRITIG-TEEENRRFLAALKEFLAA 366 (367)
T ss_pred EEeCCCCCC-CCeEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 999988863 479999995 678889999999888753
No 99
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-32 Score=233.41 Aligned_cols=229 Identities=22% Similarity=0.286 Sum_probs=174.0
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcC-CCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKG-PYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~-~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .|.+|++.++. + ++++++++||||||||.+++ ++++. .+++||+||+
T Consensus 109 ~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDea 186 (354)
T PRK04635 109 GPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEA 186 (354)
T ss_pred CCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCc
Confidence 5999999999998888763 35677777763 3 68899999999999999993 55543 3699999999
Q ss_pred c--cCC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhc
Q 024997 69 Y--FWP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLED 144 (259)
Q Consensus 69 y--~~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 144 (259)
| |.. +...+....+++++++||||.||++|+|+||++++ +++++.+..... .++++.+.|.++.+++..
T Consensus 187 y~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~---- 259 (354)
T PRK04635 187 YIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIA--PYPVPLPVSEIATQALSE---- 259 (354)
T ss_pred hHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcC--CCCCCHHHHHHHHHHHhc----
Confidence 9 422 22222234578999999999999999999999999 799998886544 366788899988888863
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecC
Q 024997 145 GGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREG 224 (259)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g 224 (259)
...+++.+.++.++++++.+.+.|+++++ +.+.++ .|.|+|+++++ .+.+.++++++||.++++
T Consensus 260 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-------------~~~~~~-~g~f~~~~~~~--~~~~~~~l~~~gv~v~~~ 323 (354)
T PRK04635 260 AGLARMKFQVLDLNAQGARLQAALSMYGG-------------AKVLEG-NGNYVLAKFDD--VDAVFKALWDAGIVARAY 323 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------ceECCC-CCcEEEEECCC--HHHHHHHHHHCCEEEEEC
Confidence 12345677788899999999999987653 333344 46799998873 455666777899999875
Q ss_pred CcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 225 KKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 225 ~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..+. .++++|||++ ++++++.+++.|++-+
T Consensus 324 ~~~~-~~~~lRis~~-~~e~~~~l~~al~~~~ 353 (354)
T PRK04635 324 KDPR-LANCIRFSFS-NRAETDKLIGLIRNQY 353 (354)
T ss_pred CCCC-CCCeEEEEeC-CHHHHHHHHHHHHHhc
Confidence 4332 3579999994 6888999998887643
No 100
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.6e-31 Score=226.00 Aligned_cols=215 Identities=17% Similarity=0.207 Sum_probs=149.3
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccc--c
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAY--F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y--~ 70 (259)
+|+|+.|...++..|.++..+.+|++.|++.+. ++++++++|||||||.+++ ++|+++|+++|+||+| |
T Consensus 84 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f 162 (311)
T PRK08354 84 RHTYGEYERVARFFAARIIKGPNDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDF 162 (311)
T ss_pred CCCcHHHHHHHHHcCCEEeecCCCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhc
Confidence 699999999999999998888899999988776 4567899999999999993 6788999999999999 3
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchH
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIF 150 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 150 (259)
-...... ..+++++++||||+||++|+|+||+++. .+.+...... +.++.+.|.++..+++. ..+++
T Consensus 163 ~~~~~~~--~~~~vi~~~S~SK~~~l~GlRiG~~v~~----~~~l~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~ 229 (311)
T PRK08354 163 VKKPESP--EGENIIKLRTFTKSYGLPGIRVGYVKGF----EEAFRSVRMP--WSIGSTGYAFLEFLIED-----DFEHL 229 (311)
T ss_pred ccccccc--CCCcEEEEeccHhhcCCccceeeeeeeh----HHHHHHcCCC--ccCCHHHHHHHHHHHHh-----HHHHH
Confidence 1111111 2578999999999999999999999983 3445544432 45666777766666652 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCC
Q 024997 151 EFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAE 230 (259)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~ 230 (259)
.+.++.+.++++.+...+ ..+++++++ |+++.. .+.+.+.|.++||.++||..|+.
T Consensus 230 ~~~~~~~~~~~~~l~~~l--------------------~~~~~~~~~-~~~~~~--~~~~~~~l~~~gv~v~~g~~f~~- 285 (311)
T PRK08354 230 RKTMPLIWREKERFEKAL--------------------YVKSDANFF-IKDVGD--AEKFVEFLKRNGILVRDCTSFGL- 285 (311)
T ss_pred HHHHHHHHHHHHHHHHhc--------------------CCCCCCcEE-EEECCC--HHHHHHHHHHCCeEEEecccCCC-
Confidence 344444444443332222 124555555 466642 34444556688999999999975
Q ss_pred CCeEEEEeecChhhHHHHHHHHHH
Q 024997 231 ARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 231 ~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
++++||+++. +++.+++++.|++
T Consensus 286 ~~~iRi~~~~-~~~~~~l~~al~~ 308 (311)
T PRK08354 286 PGYIRFSVRD-REENEKLIRALRE 308 (311)
T ss_pred CCeEEEEeCC-HHHHHHHHHHHHH
Confidence 5899999965 3334444444444
No 101
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=232.11 Aligned_cols=229 Identities=17% Similarity=0.191 Sum_probs=178.0
Q ss_pred CCCcccchhhhhhccCcc------cccccChhhhcccCC-CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVD------YKFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.+. .+|++|++++++.+. +++++++++|||||||.+++ ++++.+++++|+||+
T Consensus 119 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~ 198 (368)
T PRK03317 119 VPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEA 198 (368)
T ss_pred CCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCC
Confidence 599999999999888764 257889999998885 57888899999999999993 778878999999999
Q ss_pred c--cC--CCCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHH
Q 024997 69 Y--FW--PHFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 69 y--~~--~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
| |. +...... +..+++++++||||.||++|+|+||++++ +++++.+..... .++++++.|.++..+++.
T Consensus 199 y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~~~~l~~~~~--~~~~s~~~~~a~~~~l~~-- 273 (368)
T PRK03317 199 YAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA-PAVVDALRLVRL--PYHLSAVTQAAARAALRH-- 273 (368)
T ss_pred chhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC-HHHHHHHHhcCC--CCCCCHHHHHHHHHHhhC--
Confidence 9 42 1111111 23457999999999999999999999998 799999987653 467899999999999873
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeee
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGR 222 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~ 222 (259)
. +...+.+++++++++.+.+.|+..+ +.+..+.+++++|.++. +.+.+.+.+.++||.++
T Consensus 274 ---~-~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gv~v~ 333 (368)
T PRK03317 274 ---A-DELLASVAALRAERDRVVAWLRELG--------------LRVAPSDANFVLFGRFA--DRHAVWQGLLDRGVLIR 333 (368)
T ss_pred ---H-HHHHHHHHHHHHHHHHHHHHHHHCC--------------CEeCCCCCcEEEEeccC--CHHHHHHHHHHCCEEEE
Confidence 2 2344556678888888888888653 44557788888887764 34555566667899998
Q ss_pred cCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhhC
Q 024997 223 EGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 223 ~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~~ 259 (259)
+. +. ++++||+++ ++++++.+++.|.++++.|
T Consensus 334 ~~---~~-~~~iRi~~~-~~~~~~~~~~~l~~~~~~~ 365 (368)
T PRK03317 334 DV---GI-PGWLRVTIG-TPEENDAFLAALAEVLATE 365 (368)
T ss_pred eC---CC-CCeEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 73 32 479999995 5678899999998887643
No 102
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-32 Score=230.30 Aligned_cols=218 Identities=18% Similarity=0.239 Sum_probs=162.9
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y 69 (259)
+|+|+.|...++..|.++. +|++|++.+++.. +++++++++|||||||.+++ +++ ++|+++|+||+|
T Consensus 101 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~-~~~~~ii~De~y 178 (337)
T PRK03967 101 PPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVL-ETGKPVVLDEAY 178 (337)
T ss_pred CCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHH-hcCCEEEEECch
Confidence 5999999998888887752 3678888888764 46778889999999999984 566 479999999999
Q ss_pred --cC-CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCC
Q 024997 70 --FW-PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGG 146 (259)
Q Consensus 70 --~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 146 (259)
|. .+..+.....+++|+++||||.||++|+|+||++++ +++++.+.+.... ++++.+.|.++..+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~--~~~~~~~q~~~~~~l~~------ 249 (337)
T PRK03967 179 AEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPP--FSLNILTMKIVRLALDH------ 249 (337)
T ss_pred hhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCC--CCCCHHHHHHHHHHHhC------
Confidence 42 122222234568999999999999999999999999 6999999887654 57889999999988872
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCc
Q 024997 147 NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~ 226 (259)
.++..+.++.+.++++.+.+.|... ..+.+++|+|++++ . .+.|.++||.++++..
T Consensus 250 ~~~~~~~~~~~~~~r~~l~~~L~~~------------------~~~~~~~~~~~~~~-----~-~~~l~~~gi~v~~~~~ 305 (337)
T PRK03967 250 YDLIEERIDYIIKERERVRRELGEY------------------AYPSDANFLLLKLD-----A-YDYLLENGIVVRKLSG 305 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC------------------cCCCCCcEEEEhHH-----H-HHHHHHCCEEEEeCCC
Confidence 2356666667777777777777632 14678999999773 3 4445568999998653
Q ss_pred ccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 227 FRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 227 f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
. ..+++||+++. +++.+++++.|.++.
T Consensus 306 ~--~~~~~Ri~~~~-~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 306 R--LEGHIRVTVGK-REENDEFIKALKEIK 332 (337)
T ss_pred C--CCCeEEEecCC-HHHHHHHHHHHHHHH
Confidence 2 35799999965 444455555555443
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=6e-31 Score=225.80 Aligned_cols=227 Identities=21% Similarity=0.297 Sum_probs=178.8
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCC--CcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGP--YAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~--~~~vi~De 67 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++++++++++++||||||.+++ ++++.+ |+++|+||
T Consensus 102 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~ 181 (346)
T TIGR01141 102 PPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDE 181 (346)
T ss_pred CCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 5899999988888887652 2457888898888888999999999999999993 566655 99999999
Q ss_pred cc--cCC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 68 AY--FWP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 68 ~y--~~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
+| |.. .........+++++++|+||.+|++|+|+||++++ +++++++...... ++.+++.|.++..+++.
T Consensus 182 ~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~--- 255 (346)
T TIGR01141 182 AYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN-AEIIDALNKVRAP--FNLSRLAQAAAIAALRD--- 255 (346)
T ss_pred chhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC-HHHHHHHHhccCC--CCCCHHHHHHHHHHhCC---
Confidence 99 321 11111123457899999999999999999999998 7999998876543 66789999999888873
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeec
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~ 223 (259)
..++.+.++.++++++.+.+.|+++++ +. ..+.+|+|+|++++. +.+.+.+.|.++||.++|
T Consensus 256 ---~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~-~~~~~g~~~~~~~~~-~~~~~~~~L~~~gI~v~~ 317 (346)
T TIGR01141 256 ---DDFIEKTVEEINAERERLYDGLKKLPG-------------LE-VYPSDANFVLIRFPR-DADALFEALLEKGIIVRD 317 (346)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhcCC-------------CE-ECCCcCCEEEEecCC-CHHHHHHHHHHCCeEEEe
Confidence 236788899999999999999987643 33 245568899999876 445555666678999999
Q ss_pred CCcccCCCCeEEEEeecChhhHHHHHHHH
Q 024997 224 GKKFRAEARFVRLSLLKSQDDFDLLLHRL 252 (259)
Q Consensus 224 g~~f~~~~~~~Ris~~~~~~~~~~~~~~l 252 (259)
|..|+..++++|+|++ ++++++.+++.|
T Consensus 318 g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 318 LNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred CCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 9988643689999986 678888888776
No 104
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.97 E-value=4e-30 Score=214.16 Aligned_cols=245 Identities=16% Similarity=0.179 Sum_probs=192.5
Q ss_pred CCcccchhhhhhccCccc-----ccccChhhhcccC---C------CCceE-EEEcCCCCCChhhHH--------HhhcC
Q 024997 2 PFYPLYQEQTDYFESVDY-----KFEGEANLWGNAS---S------DTHLV-EFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~-----~~~~d~~~l~~~~---~------~~~~~-i~i~~p~NPtG~~~~--------~la~~ 58 (259)
++|+.-....+..|+.+. ..+++++.|++.+ + +++.+ +-|.+-+||||..++ +||++
T Consensus 156 ~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArK 235 (472)
T KOG0634|consen 156 YTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARK 235 (472)
T ss_pred ccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHH
Confidence 456666666666776653 3467777777765 1 23444 334445899999994 89999
Q ss_pred CCcEEEeecccc----C---C------CCCC--------CC-----CCCCCeEEEeccccccCCCcceEEEEEecCHHHH
Q 024997 59 PYAKSIYDHAYF----W---P------HFAP--------IP-----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVY 112 (259)
Q Consensus 59 ~~~~vi~De~y~----~---~------~~~~--------~~-----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~ 112 (259)
|+++||+||.|| . + +..+ .+ +..++||.+.||||.++ ||+|+||++++ +.++
T Consensus 236 yDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~-~~~l 313 (472)
T KOG0634|consen 236 YDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN-SLFL 313 (472)
T ss_pred cCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC-HHHH
Confidence 999999999992 1 1 0111 11 45679999999999997 99999999999 6999
Q ss_pred HHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC
Q 024997 113 QRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP 192 (259)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 192 (259)
+.........+.++|.+.|.+.-+.++.+.+.+..+|+.+.+..|..|+..+..+|... ++.. ....++|
T Consensus 314 ~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky-------lp~~---~~~~~~P 383 (472)
T KOG0634|consen 314 KRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKY-------LPKS---VCEYHPP 383 (472)
T ss_pred HHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCC---eeEEecC
Confidence 99999888889999999999999999987554456899999999999999999998852 3322 2567799
Q ss_pred CCCeeEEEecC-------C-Cc--hHHHHHHHHHcCeeeecCCcccCC-----CC-eEEEEeec-ChhhHHHHHHHHHHH
Q 024997 193 PSPAYAWVKCE-------R-EE--DKDCYGILKAAKIIGREGKKFRAE-----AR-FVRLSLLK-SQDDFDLLLHRLDEL 255 (259)
Q Consensus 193 ~~~~~~~~~~~-------~-~~--~~~~~~ll~~~gi~~~~g~~f~~~-----~~-~~Ris~~~-~~~~~~~~~~~l~~~ 255 (259)
.+|+|+|++++ . .+ .+.....+.++||.+++|+.|... .. ++|++++. ++++++++++|+..+
T Consensus 384 ~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ 463 (472)
T KOG0634|consen 384 KAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSV 463 (472)
T ss_pred CcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHH
Confidence 99999999996 2 12 466777788999999999999842 33 89999988 999999999999998
Q ss_pred hhh
Q 024997 256 ISK 258 (259)
Q Consensus 256 l~~ 258 (259)
+++
T Consensus 464 ike 466 (472)
T KOG0634|consen 464 IKE 466 (472)
T ss_pred HHH
Confidence 875
No 105
>PLN02368 alanine transaminase
Probab=99.97 E-value=1.4e-30 Score=226.74 Aligned_cols=190 Identities=14% Similarity=0.137 Sum_probs=148.7
Q ss_pred CCCcccchhhhhhccCcc--------cccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFESVD--------YKFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|...++..|.++ .+|++|++.|++.+++ ++++++++|||||||.+++ ++|++
T Consensus 162 ~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~ 241 (407)
T PLN02368 162 VPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQ 241 (407)
T ss_pred CCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHH
Confidence 699999999999998765 2378899999988753 6898999999999999993 78999
Q ss_pred CCcEEEeeccc----cCC--CCCCCC----C------CCCCeEEEecccccc-CCCcceEEEEEe---cCHHHHHHHHHh
Q 024997 59 PYAKSIYDHAY----FWP--HFAPIP----A------PADEELMIFTISKLT-GHAGSRFGWAVI---KDEAVYQRMSAY 118 (259)
Q Consensus 59 ~~~~vi~De~y----~~~--~~~~~~----~------~~~~~i~~~S~SK~~-g~~G~R~G~i~~---~~~~~~~~~~~~ 118 (259)
+|++||+||+| |.. .+.++. . ..+++|+++||||+| |++|||+||+++ + +++++.+...
T Consensus 242 ~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~-~~li~~~~~~ 320 (407)
T PLN02368 242 ERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-PKTVEEIYKV 320 (407)
T ss_pred cCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC-HHHHHHHHHH
Confidence 99999999999 322 222211 1 134899999999998 899999999995 6 7999999887
Q ss_pred hhhhcCCCCHHHHHHHHHHHHHHHhcC--CcchH---HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC
Q 024997 119 ISLNTMGVSRECQLRAFKLLKVVLEDG--GNNIF---EFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP 193 (259)
Q Consensus 119 ~~~~~~~~~~~~q~~~~~~l~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (259)
.. ..++++.+.|.++.++++....++ .+.+. .+..+.+++|++.+.+.|+++++ +.+..|+
T Consensus 321 ~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g-------------~~~~~P~ 386 (407)
T PLN02368 321 AS-IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKN-------------VVCNFTE 386 (407)
T ss_pred hc-ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------------eEeCCCC
Confidence 53 457889999999999997310000 01123 45678999999999999998754 6667899
Q ss_pred CCeeEEEecCCC
Q 024997 194 SPAYAWVKCERE 205 (259)
Q Consensus 194 ~~~~~~~~~~~~ 205 (259)
|+||+|++++-.
T Consensus 387 Gafy~~~~i~lp 398 (407)
T PLN02368 387 GAMYSFPQIKLP 398 (407)
T ss_pred eeeEeccCCCCC
Confidence 999999877653
No 106
>PRK03321 putative aminotransferase; Provisional
Probab=99.97 E-value=1.5e-29 Score=217.65 Aligned_cols=226 Identities=17% Similarity=0.245 Sum_probs=169.7
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcC--CCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKG--PYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~--~~~~vi~De 67 (259)
+|+|+.|...++..|.+.. .+.+|++.+++.++++++++++++||||||.+++ ++|+. +|+++|+||
T Consensus 105 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De 184 (352)
T PRK03321 105 WRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDE 184 (352)
T ss_pred CCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEec
Confidence 4788888888888887642 3567788898888888899999999999999983 56665 699999999
Q ss_pred cc--c--CCCC-CCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 68 AY--F--WPHF-APIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 68 ~y--~--~~~~-~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
+| | .... ..+. ...+++++++||||.||++|+|+||++++ +++++.+.... ..++++.+.|.++.+++..
T Consensus 185 ~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~~ 261 (352)
T PRK03321 185 AYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALRKVA--VPFSVNSLAQAAAIASLAA 261 (352)
T ss_pred hHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC
Confidence 99 2 2211 1111 23468999999999999999999999999 79999998764 3578899999988888862
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCee
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKII 220 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 220 (259)
.+.+ .+..+.+.++++.+.+.|+..+ +.. .+.+|+|+|+++... ...+.+.|+++||.
T Consensus 262 -----~~~~-~~~~~~~~~~r~~~~~~L~~~~--------------~~~-~~~~g~~i~i~l~~~-~~~~~~~l~~~gI~ 319 (352)
T PRK03321 262 -----EDEL-LERVDAVVAERDRVRAALRAAG--------------WTV-PPSQANFVWLPLGER-TADFAAAAAEAGVV 319 (352)
T ss_pred -----HHHH-HHHHHHHHHHHHHHHHHHHHCC--------------Ccc-CCCCCCEEEEeCCCC-HHHHHHHHHHCCEE
Confidence 2333 4445556666777888887643 322 345688999998643 34444556789999
Q ss_pred eecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 221 GREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 221 ~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+++ |+ .+++||++ .+.++.+.++++|+++++
T Consensus 320 v~~---~~--~~~iRi~~-~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 320 VRP---FA--GEGVRVTI-GAPEENDAFLRAARAWRA 350 (352)
T ss_pred EEc---cC--CCcEEEee-CCHHHHHHHHHHHHHHhc
Confidence 987 54 35699999 567888889988888764
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.6e-28 Score=195.90 Aligned_cols=222 Identities=17% Similarity=0.231 Sum_probs=176.4
Q ss_pred cccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEeeccccCCCCCC-----CC-CCCCCe
Q 024997 19 YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIYDHAYFWPHFAP-----IP-APADEE 84 (259)
Q Consensus 19 ~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~De~y~~~~~~~-----~~-~~~~~~ 84 (259)
.+|.+|+++|+ +.+++.+|+++-|.||||.++ .++|+++|+.+|+|++| +..+.. +. .-.+++
T Consensus 165 FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAY-g~PFP~iifsd~~~~w~~Ni 241 (417)
T COG3977 165 FKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAY-GVPFPGIIFSDATPLWNENI 241 (417)
T ss_pred eeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEeccc-CCCCCceecccccccCCCCE
Confidence 45788888776 458899999999999999999 37899999999999999 322221 11 346889
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchH-HHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIF-EFGYNTMKKRWEN 163 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 163 (259)
+.+.|+||. |+||.|+|.+++. +++++++.+.....+..++...+++++.++++ |+-.+.. +..+.-|+++...
T Consensus 242 ilC~SLSK~-GLPG~R~GIiIan-e~viqaitnmn~iisLap~~~G~Aia~~mie~---gdl~rlseqVIrPFY~~~~q~ 316 (417)
T COG3977 242 ILCMSLSKL-GLPGSRCGIIIAN-EKVIQAITNMNGIISLAPGRMGPAIAAEMIES---GDLLRLSEQVIRPFYRNRVQT 316 (417)
T ss_pred EEEeehhhc-CCCCcceeEEEcc-HHHHHHHHhccceeeecCCCccHHHHHHHhhc---chHHHHHHHhhhHHHHHHHHH
Confidence 999999998 7999999999999 79999999998888888899999999999985 2111111 2344556667777
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccCC--------CCe
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRAE--------ARF 233 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~~--------~~~ 233 (259)
....|++. +++ .-+..+.|+|++|+|+.+++. +...+.+.|++.|+.++||+.|.++ ..+
T Consensus 317 ~~~~l~~~-------lp~---~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC 386 (417)
T COG3977 317 TIAILRRY-------LPE---YRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQC 386 (417)
T ss_pred HHHHHHHh-------cCc---cceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccce
Confidence 77777642 111 116678999999999998876 5788888899999999999999853 457
Q ss_pred EEEEeecChhhHHHHHHHHHHHhhh
Q 024997 234 VRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 234 ~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+|+++..+++.+++++.+|.+-+++
T Consensus 387 ~Rmn~~~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 387 MRMNYVPEPEKIEKGVAILAEEVER 411 (417)
T ss_pred EEEecCCCHHHHHHHHHHHHHHHHH
Confidence 9999988999999999999887764
No 108
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=5.6e-26 Score=178.24 Aligned_cols=235 Identities=15% Similarity=0.181 Sum_probs=178.9
Q ss_pred CCcccchhhhhhccCcc------cccccChhhhcccC--CCCceEEEEcCCCCCChhhHH-----HhhcC-CCcEEEeec
Q 024997 2 PFYPLYQEQTDYFESVD------YKFEGEANLWGNAS--SDTHLVEFVTAPNNPDGQMNK-----AVLKG-PYAKSIYDH 67 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~--~~~~~~i~i~~p~NPtG~~~~-----~la~~-~~~~vi~De 67 (259)
|+|..|.-.+...+.++ ..|.+|.+++.+.+ ...+|++++++|+||||..+. ++.+. -|.+|++||
T Consensus 119 PtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDE 198 (375)
T KOG0633|consen 119 PTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDE 198 (375)
T ss_pred CcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEee
Confidence 88999998888877766 35788889998888 347899999999999999984 44443 478999999
Q ss_pred cc--cCCCCCC--CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 68 AY--FWPHFAP--IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 68 ~y--~~~~~~~--~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
+| |...... +....++.+++.|+||+||++|+|+||-..+ ..++.-+.+.+.. +++|.+...+++++++.
T Consensus 199 AYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~-~~ia~iln~~KaP--YNiS~~~s~~AL~Als~--- 272 (375)
T KOG0633|consen 199 AYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP-LSIAEILNRAKAP--YNISVAGSVAALAALSD--- 272 (375)
T ss_pred eeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccccc-HHHHHHHHhccCC--ccccchhHHHHHHhcCc---
Confidence 99 5322222 2357789999999999999999999999999 8999999888876 66778888888888874
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----chHHHHHHHHHcCe
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----EDKDCYGILKAAKI 219 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi 219 (259)
..-..++..+..+-+.+.++...|..++... ....+..+.|+++.+.+. +.....+++.++||
T Consensus 273 -~n~kkme~~rdaiv~er~RL~keLt~v~~~~------------~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gV 339 (375)
T KOG0633|consen 273 -SNGKKMEDVRDAIVRERERLFKELTEVPFLN------------DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGV 339 (375)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHhhcCcccc------------CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcce
Confidence 2445678888888899999999998766311 112455577888888754 34567777888999
Q ss_pred eeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 220 IGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 220 ~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.+|--..-....|++||+++. +|+-.-+++.+++++
T Consensus 340 vVRfrgse~~c~G~lRitvGt-~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 340 VVRFRGSEEGCKGYLRITVGT-PEENTVLMKCLKQFL 375 (375)
T ss_pred EEEEcCCccccceeEEEEcCC-cccchHHHHHHHhhC
Confidence 998622111247899999955 455566777777764
No 109
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=3.1e-25 Score=189.57 Aligned_cols=224 Identities=13% Similarity=0.071 Sum_probs=163.2
Q ss_pred CCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEeecccc---
Q 024997 2 PFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIYDHAYF--- 70 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~De~y~--- 70 (259)
|+|+.|...+++.|.+...+ .|++.++. .+++++|++ +++||+|.++ .++|+++|+++|+||+|-
T Consensus 106 p~~~s~~~~~~l~ga~~~~~-~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~ 181 (346)
T TIGR03576 106 PAHPSIPRSCKLAGAEYFES-DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARV 181 (346)
T ss_pred CCchhHHHHHHHcCCEEecc-CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 68888888888888865332 24444432 245777666 5679999985 267889999999999992
Q ss_pred -CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 -WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 -~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
...........+..++++|||| +++|+|+||++++ +++++.+.+.......+.+++.|.++.++|+. ..
T Consensus 182 ~~~~~~~~~~~~~~divv~s~SK--alaG~r~G~v~~~-~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~-----~~-- 251 (346)
T TIGR03576 182 RRLYGQPPALDLGADLVVTSTDK--LMDGPRGGLLAGR-KELVDKIKSVGEQFGLEAQAPLLAAVVRALEE-----FE-- 251 (346)
T ss_pred cccCCCCCHHHcCCcEEEeccch--hccccceEEEEeC-HHHHHHHHHhhcCcccCccHHHHHHHHHHHhh-----cc--
Confidence 1111110011123577889999 5689999999999 79999999988766666788999999999873 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCccc
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
..+.++.++++++.+.+.++.+. ..++ .+.|+|++++.. +.+++.++|+++||.++||..|.
T Consensus 252 ~~~~~~~l~~r~~~~~~~l~~~~----------------~~~~-~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~ 314 (346)
T TIGR03576 252 LSRIRDAFKRKEEVYLRLFDKLN----------------VERT-PTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMP 314 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC----------------CCcC-CCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccC
Confidence 34567788888888877776422 1233 344899998753 35789999999999999999885
Q ss_pred CCCCeEEEEeecChh---hHHHHHHHHHHHh
Q 024997 229 AEARFVRLSLLKSQD---DFDLLLHRLDELI 256 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~---~~~~~~~~l~~~l 256 (259)
..++++|||++.+++ +++.+++.|++.+
T Consensus 315 ~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 315 GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 446899999987555 7899999988765
No 110
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=2.9e-24 Score=184.02 Aligned_cols=235 Identities=21% Similarity=0.289 Sum_probs=185.5
Q ss_pred CCCcccchhhhhhccCccccc------ccCh--hhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYKF------EGEA--NLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~------~~d~--~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.+...++..|.....+ ..+. +.++....++++++++++|+||||.+++ ++|+++|+++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~i 169 (350)
T cd00609 90 DPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILII 169 (350)
T ss_pred CCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEE
Confidence 478999999998888765322 2222 4455556778999999999999999883 68999999999
Q ss_pred eecccc----CCCCC---CCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAYF----WPHFA---PIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y~----~~~~~---~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+|++|. ..... ...+..+.+++++|+||.++.+|.|+||++++++++.+.+.........+++...|.++..+
T Consensus 170 vD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (350)
T cd00609 170 SDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAA 249 (350)
T ss_pred EecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHH
Confidence 999992 12221 11245567999999999999899999999999338999998888776778899999988888
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKA 216 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~ 216 (259)
++. ......+.++.++++++.+.+.|++++. .....+.+|+++|+.++.. +.+.+.+++.+
T Consensus 250 l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 311 (350)
T cd00609 250 LDD-----GEEHLEELRERYRRRRDALLEALKELGP-------------LVVVKPSGGFFLWLDLPEGDDEEFLERLLLE 311 (350)
T ss_pred HhC-----cHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------ccccCCCccEEEEEecCCCChHHHHHHHHHh
Confidence 884 2256788888999999999999998663 1113667899999998765 46778888988
Q ss_pred cCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHH
Q 024997 217 AKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLD 253 (259)
Q Consensus 217 ~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~ 253 (259)
+||.++++..|.. +..++|++++..+++++.++++|+
T Consensus 312 ~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 312 AGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred CCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 9999999888873 568999999777889999999886
No 111
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.92 E-value=2.9e-23 Score=172.06 Aligned_cols=243 Identities=16% Similarity=0.175 Sum_probs=165.9
Q ss_pred CCCcccchhhhhhccCccc-----ccccChhhhcccC--CCCceEEEEcCC--CCCChhhHH-----Hhh----cCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY-----KFEGEANLWGNAS--SDTHLVEFVTAP--NNPDGQMNK-----AVL----KGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----~~~~d~~~l~~~~--~~~~~~i~i~~p--~NPtG~~~~-----~la----~~~~~~ 62 (259)
.|+|.-+-.+.+.+|.+.. .-++|++.++++. ++..|. +.|-| +||||.+++ ++| ...++.
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM~~dGPDmD~Ve~LV~~D~svKG-iWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFR 209 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPMTEDGPDMDMVEELVAEDPSVKG-IWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFR 209 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEEETTEE-HHHHHHHTHTSTTEEE-EEE-SSS-TTT-----HHHHHHHHHS--SSTT-E
T ss_pred CCCchHHHHHHHhhCcEEEecCCCCCCCCHHHHHHHHhcCCccce-EEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeE
Confidence 3889999999999998863 3489999999998 457787 45555 899999995 454 468999
Q ss_pred EEeeccc-c----CC-C-CC--CCC------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCC
Q 024997 63 SIYDHAY-F----WP-H-FA--PIP------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVS 127 (259)
Q Consensus 63 vi~De~y-~----~~-~-~~--~~~------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~ 127 (259)
|+.|++| + .. . .. .+. +.+++++.+.|+||+. ++|..++++.++ ++.++.++......+.++.
T Consensus 210 I~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS-~~Nl~~~~~~~~~~tIgpd 287 (425)
T PF12897_consen 210 IFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAAS-EANLAWIKKHLSVQTIGPD 287 (425)
T ss_dssp EEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE--HHHHHHHHHHHHHH-S---
T ss_pred EEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecC-HHHHHHHHHHhcCceeCcc
Confidence 9999999 2 11 1 11 111 5788999999999997 699999999999 7999999999998899999
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-ccccccceeeCCCCCeeEEEecCCCc
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIA-PQYCTYFKKIRPPSPAYAWVKCEREE 206 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (259)
.++|..-++++.....| ...|+.++.+.++-+++.+.+.|++ +|. +. ....+..|.||+|++++..+..
T Consensus 288 KvNQLRHvrff~d~~gG-v~aHM~kHa~il~PKF~~V~~~L~~-------~L~~~~--~ia~Wt~P~GGYFIsld~~~G~ 357 (425)
T PF12897_consen 288 KVNQLRHVRFFKDAEGG-VRAHMRKHAAILRPKFEAVLEILEE-------ELGDGL--GIASWTKPKGGYFISLDVLDGT 357 (425)
T ss_dssp HHHHHHHHHHHHSHHTH-HHHHHHHHHHHHHHHHHHHHHHHHH-------HHGTGG--TSEEE---SBSS-EEEEESTT-
T ss_pred HHHHHHHHHHhcChhhH-HHHHHHHHHHHHhhhHHHHHHHHHH-------hcCCCC--CeeEecCCCCceEEEEecCCCh
Confidence 99999999999964212 4567888888888888888888874 233 21 1256789999999999998877
Q ss_pred hHHHHHHHHHcCeeeec-CCcccC----CCCeEEEEeec-ChhhHHHHHHHHHHHh
Q 024997 207 DKDCYGILKAAKIIGRE-GKKFRA----EARFVRLSLLK-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~-g~~f~~----~~~~~Ris~~~-~~~~~~~~~~~l~~~l 256 (259)
...+.+++++.||.+.| |..|.. ....+||+.+. +.++++.+++.+.-.+
T Consensus 358 AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 358 AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCV 413 (425)
T ss_dssp HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHH
Confidence 88999999999999999 888873 25689999987 8899999999887543
No 112
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.91 E-value=3e-23 Score=183.11 Aligned_cols=236 Identities=13% Similarity=0.080 Sum_probs=171.1
Q ss_pred CCCcccchhhhhhccCccc--------------ccc--cChhhhcccCC----CCceEEEEcCCCCCCh-hhH-------
Q 024997 1 MPFYPLYQEQTDYFESVDY--------------KFE--GEANLWGNASS----DTHLVEFVTAPNNPDG-QMN------- 52 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------------~~~--~d~~~l~~~~~----~~~~~i~i~~p~NPtG-~~~------- 52 (259)
+|.|+.|....++.|.+.. +|. +|++.|++.++ +++++|++++|||||| .++
T Consensus 123 ~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~ 202 (460)
T PRK13238 123 NYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRA 202 (460)
T ss_pred CCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHH
Confidence 5889999998888887652 355 89999999986 4799999999999998 554
Q ss_pred -HHhhcCCCcEEEeecccc-CCC-C-----CCCC--CCCCCeEEEeccccccCCCcceEE------EEEecCHHHHHHHH
Q 024997 53 -KAVLKGPYAKSIYDHAYF-WPH-F-----APIP--APADEELMIFTISKLTGHAGSRFG------WAVIKDEAVYQRMS 116 (259)
Q Consensus 53 -~~la~~~~~~vi~De~y~-~~~-~-----~~~~--~~~~~~i~~~S~SK~~g~~G~R~G------~i~~~~~~~~~~~~ 116 (259)
.++|+++|++||+|++++ +.. + .... ...+-+..++|++|++.++|+|+| +++++++++.++++
T Consensus 203 I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~ 282 (460)
T PRK13238 203 VYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECR 282 (460)
T ss_pred HHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhh
Confidence 388999999999999773 211 0 0011 111113345778888877788863 55656468888887
Q ss_pred Hhh----hhhcCCC-CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC
Q 024997 117 AYI----SLNTMGV-SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR 191 (259)
Q Consensus 117 ~~~----~~~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 191 (259)
... ...+.+. +...|.+++..+++.. .+++ .+...++++.+.+.|++.+ +++..
T Consensus 283 ~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~---~~~~----~~~~~~~~~~l~~~L~~~G--------------~~~~~ 341 (460)
T PRK13238 283 TLCILYEGFPTYGGLAGRDMEALAVGLYEGM---DEDY----LAYRIGQVEYLGEGLEEAG--------------VPIQT 341 (460)
T ss_pred hcccccCCcccccCcHHHHHHHHHhhHHHhh---ChHH----HHHHHHHHHHHHHHHHHCC--------------CCeEc
Confidence 663 2224444 4555887777776421 2223 3333446788888888754 66778
Q ss_pred CCCCeeEEEecCCC----------chHHHHHHHHHcCeeeecCCcccCC------------CCeEEEEeec---ChhhHH
Q 024997 192 PPSPAYAWVKCERE----------EDKDCYGILKAAKIIGREGKKFRAE------------ARFVRLSLLK---SQDDFD 246 (259)
Q Consensus 192 ~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~~~~g~~f~~~------------~~~~Ris~~~---~~~~~~ 246 (259)
|.+|+|+++++... +.+++..++++.||.+.|+..|..+ ...+||++.+ +.+.++
T Consensus 342 p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~ 421 (460)
T PRK13238 342 PAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMD 421 (460)
T ss_pred cCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHH
Confidence 99999999998652 4678999999999999999888731 4789999977 999999
Q ss_pred HHHHHHHHHhh
Q 024997 247 LLLHRLDELIS 257 (259)
Q Consensus 247 ~~~~~l~~~l~ 257 (259)
++.++|+++.+
T Consensus 422 ~~~~~l~~~~~ 432 (460)
T PRK13238 422 YVAEALKAVKE 432 (460)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 113
>PRK07049 methionine gamma-lyase; Validated
Probab=99.90 E-value=1.5e-22 Score=177.59 Aligned_cols=243 Identities=14% Similarity=0.172 Sum_probs=162.9
Q ss_pred CCCcccchhhh----hhccCccccc--ccChhhhcccC-----CCCceEEEEcCCCCCChhhHH-----HhhcC------
Q 024997 1 MPFYPLYQEQT----DYFESVDYKF--EGEANLWGNAS-----SDTHLVEFVTAPNNPDGQMNK-----AVLKG------ 58 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~--~~d~~~l~~~~-----~~~~~~i~i~~p~NPtG~~~~-----~la~~------ 58 (259)
+|+|+.|...+ ...|.+...+ ..|++.+++.+ ++++++|++++||||||.+++ ++++.
T Consensus 129 ~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~ 208 (427)
T PRK07049 129 QPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQG 208 (427)
T ss_pred CCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhccc
Confidence 58999997764 3457664333 35566666554 257899999999999999983 56655
Q ss_pred CCcEEEeeccccCCC-CCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 59 PYAKSIYDHAYFWPH-FAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 59 ~~~~vi~De~y~~~~-~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+++++|+||+|..+- ..++ ..+.+++++|+||.+| ++|+|+||++++ +++++++.......+.+++++.|+++.+
T Consensus 209 ~~~~vvvDety~~~~~~~pl--~~g~divv~S~SK~~gG~~glr~G~vv~~-~~l~~~l~~~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 209 HRPIIACDNTLLGPVFQKPL--EHGADLSVYSLTKYVGGHSDLVAGAVLGR-KALIRQVRALRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred CCCEEEEECCccccccCCcc--ccCCCEEEEcCceeecCCCCcEEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 789999999984221 1122 2345789999999998 699999999988 7999999988877778899999988766
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccc---ccccc---ceeeCCCCCeeEEEecCCCchHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAP---QYCTY---FKKIRPPSPAYAWVKCEREEDKDC 210 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 210 (259)
.++ .+..++++..+++..+.+.|++.+.+.....|+ ..... ++......|..+.+.++. +.+.+
T Consensus 286 ~L~---------tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~ 355 (427)
T PRK07049 286 SLE---------TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG-GQAAA 355 (427)
T ss_pred CCC---------hHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC-CHHHH
Confidence 665 456667888999999999999998766444442 11111 111111234455566653 34445
Q ss_pred HHHHHHcCeee---ecCCcc----------------------cCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 211 YGILKAAKIIG---REGKKF----------------------RAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 211 ~~ll~~~gi~~---~~g~~f----------------------~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.++++.-.+.. .-|... +..++.+|||++- |+.+++++-|.+.|++
T Consensus 356 ~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~ 426 (427)
T PRK07049 356 FRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI--EHPDDLIADLAQALDA 426 (427)
T ss_pred HHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHHhc
Confidence 55555444422 222100 0125679999987 4455666666666654
No 114
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.90 E-value=2.3e-22 Score=175.95 Aligned_cols=231 Identities=14% Similarity=0.088 Sum_probs=160.1
Q ss_pred chhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCC-
Q 024997 7 YQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHF- 74 (259)
Q Consensus 7 ~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~- 74 (259)
|...++..|.++. .+.+|++++++.++++++++++++||||||.+++ ++|+++|+++|+|++|.....
T Consensus 126 ~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~ 205 (401)
T PRK10874 126 WLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP 205 (401)
T ss_pred HHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc
Confidence 4555666676652 2467889999999889999999999999999983 889999999999999831111
Q ss_pred CCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh---------------------hhcCCCCHHHHHH
Q 024997 75 APIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS---------------------LNTMGVSRECQLR 133 (259)
Q Consensus 75 ~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~q~~ 133 (259)
..+ ...+.++++.|++|.+|.+| +||++++ +++++.+..... .....++.+.+.+
T Consensus 206 ~~~-~~~~~d~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~a 281 (401)
T PRK10874 206 ADV-QALDIDFYAFSGHKLYGPTG--IGVLYGK-SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIG 281 (401)
T ss_pred CCc-hhcCCCEEEEecccccCCCc--cEEEEEc-hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHH
Confidence 122 23346788999999999888 6999998 688887643220 0011233345555
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGI 213 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 213 (259)
..++++...+ .-..+..++.++.++.+.+.|+++++ +....+..+..+++.++..+.+.+.+.
T Consensus 282 l~~al~~l~~----~g~~~~~~~~~~l~~~l~~~l~~~~g-------------~~~~~~~~~~i~~~~~~~~~~~~~~~~ 344 (401)
T PRK10874 282 LSAALEWLAD----IDINQAESWSRSLATLAEDALAKLPG-------------FRSFRCQDSSLLAFDFAGVHHSDLVTL 344 (401)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHhcCCC-------------EEEeCCCCCcEEEEEECCcCHHHHHHH
Confidence 5555553211 11334566777778888888876654 222333344455556665555666677
Q ss_pred HHHcCeeeecCCcccC-------CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 214 LKAAKIIGREGKKFRA-------EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~-------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|+++||.+++|..+.. ..+++|+|++. ++++++.+++.|++++++
T Consensus 345 L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 345 LAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred HHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 7889999999987642 24799999975 899999999999987753
No 115
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.90 E-value=1.8e-22 Score=173.90 Aligned_cols=228 Identities=12% Similarity=0.033 Sum_probs=163.1
Q ss_pred CCCcccchhhhhhccCccccc-ccChhhhcccCC----CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-EGEANLWGNASS----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...++..|.++..+ .+|++.|++.++ ++++++++++++||||... .++|+++|+++|+||+|.
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~ 186 (360)
T TIGR00858 107 ALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHG 186 (360)
T ss_pred ccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccc
Confidence 478888888888888766433 467888888773 3578889999999999775 389999999999999982
Q ss_pred ----CCCCCC---CCC--CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh--cCCCCHHHHHHHHHHHH
Q 024997 71 ----WPHFAP---IPA--PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN--TMGVSRECQLRAFKLLK 139 (259)
Q Consensus 71 ----~~~~~~---~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~ 139 (259)
.....+ ..+ ..+++|+++|+||.+|.+| ||++++ +++++.+....... ..+.++..+.++..+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 262 (360)
T TIGR00858 187 TGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS-QALIDYLINRARTLIFSTALPPAVAAAALAALE 262 (360)
T ss_pred ccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHH
Confidence 111111 111 2467999999999999877 999998 69998886544322 23345555556666665
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcC
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAK 218 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~g 218 (259)
.. ......+++++++++.+.+.|++++ +.. .+.++.++|+.++.. +.+.+.+.|.++|
T Consensus 263 ~~------~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 321 (360)
T TIGR00858 263 LI------QEEPWRREKLLALIARLRAGLEALG--------------FTL-MPSCTPIVPVIIGDNASALALAEELQQQG 321 (360)
T ss_pred HH------hhCHHHHHHHHHHHHHHHHHHHHcC--------------Ccc-CCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 31 1234568899999999999998754 222 244677888888643 3344555556789
Q ss_pred eeeecCCcccC--CCCeEEEEeec--ChhhHHHHHHHHH
Q 024997 219 IIGREGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 219 i~~~~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~ 253 (259)
|.+.++..+.. +.+++|++++. ++++++.++++|+
T Consensus 322 I~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 322 IFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred eeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 99998766542 35689999975 8999999998863
No 116
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=1.8e-22 Score=177.04 Aligned_cols=225 Identities=12% Similarity=0.082 Sum_probs=153.7
Q ss_pred hhhhhccCcccccc-cChhhhcccC----CCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc----cCCCC
Q 024997 9 EQTDYFESVDYKFE-GEANLWGNAS----SDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY----FWPHF 74 (259)
Q Consensus 9 ~~~~~~g~~~~~~~-~d~~~l~~~~----~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y----~~~~~ 74 (259)
..++..|.++..+. .|.+.+++.+ .+++++|++++|+||||.+++ ++|+++|+++|+||+| |++..
T Consensus 147 ~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g 226 (410)
T PRK13392 147 EGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARG 226 (410)
T ss_pred HHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCC
Confidence 34444565543332 2344444443 357899999999999999873 8899999999999999 22222
Q ss_pred CCCC---CCCCC-eEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 75 APIP---APADE-ELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 75 ~~~~---~~~~~-~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
..+. +..++ .++++|+||.||.+| ||++++ +++++.+++.... .+.+.+++.|.++.++|+.. +
T Consensus 227 ~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~-~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-----~- 296 (410)
T PRK13392 227 GGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS-ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL-----K- 296 (410)
T ss_pred CchhhhccCCCCCcEEEEEChHhhhccc---chhhcC-HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH-----h-
Confidence 2211 22223 588999999999998 999988 7999988876543 24456667888888888742 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCc
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~ 226 (259)
...+.+++++++++++.+.|++++ +...+++++++ .+.++.. ..++...+++++||.++++..
T Consensus 297 ~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~-~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~ 361 (410)
T PRK13392 297 TSQTERDAHQDRVAALKAKLNANG--------------IPVMPSPSHIV-PVMVGDPTLCKAISDRLMSEHGIYIQPINY 361 (410)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC--------------CCCCCCCCCEE-EEEeCCHHHHHHHHHHHHHhCCEEEeeeCC
Confidence 223456788999999999998754 33334455543 3333321 234555566678999998653
Q ss_pred ccC--CCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 227 FRA--EARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 227 f~~--~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
... +..++|+++. .++++++.+++.|.+++++
T Consensus 362 p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 362 PTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 332 3578999984 4999999999999988753
No 117
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=6.7e-22 Score=172.88 Aligned_cols=231 Identities=14% Similarity=0.069 Sum_probs=156.7
Q ss_pred chhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCC
Q 024997 7 YQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFA 75 (259)
Q Consensus 7 ~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~ 75 (259)
|...++..|.++. .+.+|++.|++.++++++++++++||||||.+++ ++|+++|+++++|++|.....
T Consensus 123 ~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~- 201 (398)
T TIGR03392 123 WLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG- 201 (398)
T ss_pred HHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-
Confidence 4555566677652 2457888999999889999999999999999983 889999999999999931111
Q ss_pred CCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh--------------------hhcCC-CCHHHHHH
Q 024997 76 PIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS--------------------LNTMG-VSRECQLR 133 (259)
Q Consensus 76 ~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~--------------------~~~~~-~~~~~q~~ 133 (259)
++. ...+.++++.|++|.+|.+| +||++++ +++++.+..... ....+ ++.+...+
T Consensus 202 ~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a 278 (398)
T TIGR03392 202 PPDVQALDIDFYAFSGHKLYGPTG--IGVLYGK-TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIG 278 (398)
T ss_pred CCChhhcCCCEEEEecccccCCCc--eEEEEEc-HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHH
Confidence 111 22345788899999998777 8999999 688877643210 00112 22234444
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGI 213 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 213 (259)
+.++++...+ .-+.+..++..+.++.+.+.|++++++ ....+..+..+++.++..+.+.+.+.
T Consensus 279 ~~~al~~l~~----~g~~~i~~~~~~l~~~l~~~l~~l~g~-------------~~~~~~~~~i~~~~~~~~~~~~l~~~ 341 (398)
T TIGR03392 279 LSAALEWLTD----IDIAAAEAWSVSLADLAEERLAQLPGF-------------RSFRCPGSSLLAFDFAGVHHSDLAAL 341 (398)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHhcCCCe-------------EEeCCCCCcEEEEEeCCcCHHHHHHH
Confidence 4444443211 123355677777888888888776542 22222334455556665545566667
Q ss_pred HHHcCeeeecCCcccC-------CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 214 LKAAKIIGREGKKFRA-------EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~-------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|+++||.+++|..+.. ..+++|+|+.. ++++++.+++.|++++++
T Consensus 342 L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 342 LAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred HHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 7889999999986642 14799999975 899999999999988753
No 118
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.9e-22 Score=166.37 Aligned_cols=238 Identities=15% Similarity=0.170 Sum_probs=175.4
Q ss_pred CCcccchhhhhhccCcc--------cccccChhhhcccC----CC-CceEEEEcCCCCCChhhHH--------HhhcCCC
Q 024997 2 PFYPLYQEQTDYFESVD--------YKFEGEANLWGNAS----SD-THLVEFVTAPNNPDGQMNK--------AVLKGPY 60 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~--------~~~~~d~~~l~~~~----~~-~~~~i~i~~p~NPtG~~~~--------~la~~~~ 60 (259)
|.||.|.......|... .+|.+|.++|+..+ +. +++++++.||.||||.+++ ..|.+++
T Consensus 169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~ 248 (475)
T KOG0258|consen 169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEG 248 (475)
T ss_pred CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcC
Confidence 89999999999998875 36899998888765 23 7889999999999999994 7789999
Q ss_pred cEEEeeccc----cC--CCCCCCC------C--CCC--CeEEEecccccc-CCCcceEEEEEec--CHHHHHHHHHhhhh
Q 024997 61 AKSIYDHAY----FW--PHFAPIP------A--PAD--EELMIFTISKLT-GHAGSRFGWAVIK--DEAVYQRMSAYISL 121 (259)
Q Consensus 61 ~~vi~De~y----~~--~~~~~~~------~--~~~--~~i~~~S~SK~~-g~~G~R~G~i~~~--~~~~~~~~~~~~~~ 121 (259)
++++.||+| |. ..+.++. + ..+ ..+.++|.||.+ |-.|-|-||+-.- +++..+.+.+...
T Consensus 249 l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s- 327 (475)
T KOG0258|consen 249 LVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS- 327 (475)
T ss_pred eEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHh-
Confidence 999999999 52 2455543 1 112 366799999997 6789999998753 2467776666554
Q ss_pred hcCCCCHHHHHHHHHHHHHHHhcC-----CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCe
Q 024997 122 NTMGVSRECQLRAFKLLKVVLEDG-----GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPA 196 (259)
Q Consensus 122 ~~~~~~~~~q~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (259)
...|++...|...-..+..+..++ .....+...+.++++.+.+.+.++++.+ +.|.+++|+|
T Consensus 328 i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~g-------------i~cn~~qGAM 394 (475)
T KOG0258|consen 328 IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEG-------------ISCNPVQGAM 394 (475)
T ss_pred hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCc-------------eeeccCccce
Confidence 245666666776655554433221 1222445667788888888888888776 6778999999
Q ss_pred eEEEecCCC--------------chHHHHHHHHHcCeeeecCCcccCC--CCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 197 YAWVKCERE--------------EDKDCYGILKAAKIIGREGKKFRAE--ARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 197 ~~~~~~~~~--------------~~~~~~~ll~~~gi~~~~g~~f~~~--~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
|++-.+.-. |.=.+.++|+..||.++||++|++. .-++|.+|-... + +.+++++++-
T Consensus 395 Y~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH 467 (475)
T KOG0258|consen 395 YLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFH 467 (475)
T ss_pred eecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHH
Confidence 999765432 3344778899999999999999974 447899985533 4 7778877664
No 119
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=3.1e-21 Score=166.53 Aligned_cols=230 Identities=13% Similarity=0.133 Sum_probs=155.8
Q ss_pred CCCcccc----hhhhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLY----QEQTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~----~~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.. ...+...|.++..+. .|++.+++.+++++++|++++|+||+|... .++|+++|+++|+|++|.
T Consensus 97 ~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 97 SDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred cCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 4677753 334444676654443 467889999988999999999999999886 388999999999999983
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCC-CcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGH-AGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
. .....+...+.+++++|+||.++. .+++.|+++++++++.+.+...+...+.+.+++.|+++.+.++ .
T Consensus 177 ~-~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~---------t 246 (366)
T PRK08247 177 T-PVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK---------T 246 (366)
T ss_pred c-ccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC---------c
Confidence 1 111111123568999999999963 4679999998756888888877776667788888877766555 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHH-------------H
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILK-------------A 216 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-------------~ 216 (259)
+..++++.+++++.+.+.|++++++.. ...++.+|+|.| .++. .+...++++ .
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~p~v~~-----------v~~P~~gg~~sf-~~~~--~~~~~~~~~~l~~~~~~~slg~~ 312 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQPGVTD-----------VLYPGRGGMLSF-RLQD--EEWVNPFLKSLKLITFAESLGGV 312 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeE-----------EecCCcCcEEEE-EECC--HHHHHHHHHcCCcceEccCCCCC
Confidence 455677889999999999998764221 113447888887 5642 233333333 2
Q ss_pred cCeeeecCCccc------------CCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 217 AKIIGREGKKFR------------AEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 217 ~gi~~~~g~~f~------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+.+.+.|++.+. .+++.+|||++- |+.+++++-|.+.|
T Consensus 313 ~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al 362 (366)
T PRK08247 313 ESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAF 362 (366)
T ss_pred ceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 234455664331 135689999987 33444444444444
No 120
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=2.3e-21 Score=169.26 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=156.2
Q ss_pred CCCcccchhhhhhccCcccc-cccChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDYK-FEGEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~-~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|.|+.+...++..+..... ..+|+++|++.+++ ++++|++++++||||.+. .++|+++|+++|+||+
T Consensus 129 ~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~ 208 (393)
T TIGR01822 129 ALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDEC 208 (393)
T ss_pred ccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECC
Confidence 47788887777776655432 25788888887743 678888888999999987 3899999999999999
Q ss_pred c-c---CCCCCC---CCC-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh-cC-CCCHHHHHHHHHHH
Q 024997 69 Y-F---WPHFAP---IPA-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-TM-GVSRECQLRAFKLL 138 (259)
Q Consensus 69 y-~---~~~~~~---~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-~~-~~~~~~q~~~~~~l 138 (259)
| + +..... ..+ ..+.+++++|+||.++ |+|+||++++ +++++.+....... .. ..++..+.++.+++
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al 285 (393)
T TIGR01822 209 HATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGGFTTAR-KEVVELLRQRSRPYLFSNSLPPAVVGASIKVL 285 (393)
T ss_pred ccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHH
Confidence 8 3 111111 112 2246799999999975 7899999999 79999887643322 22 23444445556666
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C-chHHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E-EDKDCYGILKA 216 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ll~~ 216 (259)
+.. ...++.+++++++++.+.+.|+..+ +....+.++ ++.+.+.. . ..++...++ +
T Consensus 286 ~~~------~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~-~~~i~~~~~~~~~~l~~~L~-~ 343 (393)
T TIGR01822 286 EML------EASNELRDRLWANTRYFRERMEAAG--------------FDIKPADHP-IIPVMLYDAVLAQRFARRLL-E 343 (393)
T ss_pred HHH------hcCHHHHHHHHHHHHHHHHHHHHcC--------------CCCCCCCCC-EEEEEeCCHHHHHHHHHHHH-H
Confidence 531 1245567889999999999988653 222223333 33333332 1 234444444 5
Q ss_pred cCeeeecCCcccC---CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 217 AKIIGREGKKFRA---EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ~gi~~~~g~~f~~---~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+||.+. +..|.. +...+|+|++. +++++++++++|.+++++
T Consensus 344 ~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 344 EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 699987 555542 33579998865 899999999999988753
No 121
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=2.1e-21 Score=169.70 Aligned_cols=207 Identities=14% Similarity=0.130 Sum_probs=145.3
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChh-hH--------HHhhcCCCcEEEeeccc--cCC--CCCCCC--CCCCCeEEEe
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQ-MN--------KAVLKGPYAKSIYDHAY--FWP--HFAPIP--APADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~-~~--------~~la~~~~~~vi~De~y--~~~--~~~~~~--~~~~~~i~~~ 88 (259)
|+++|++.++++++++++++++||+|. .+ .++|+++|+++|+||+| |+. ...... +..+. +.
T Consensus 171 d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~ 247 (396)
T PRK02627 171 DIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IM 247 (396)
T ss_pred CHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EE
Confidence 788899999888999899888999994 43 28999999999999999 421 111111 21122 45
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
||||.++ +|+|+||++++ +++++.+.......+++.+++.|+++.++++... .+++ .++++++.+.+.+.|
T Consensus 248 t~sK~~~-~G~rig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~~~~----~~~~~~~~~~~~~~l 318 (396)
T PRK02627 248 TLAKGLG-GGVPIGAVLAK-EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIE---EEGL----LENAAEVGEYLRAKL 318 (396)
T ss_pred EEcchhh-CCcccEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccH----HHHHHHHHHHHHHHH
Confidence 8999999 99999999999 6999888765555678899999999999998531 2233 445555555555555
Q ss_pred HhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHH
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFD 246 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~ 246 (259)
.++.. .++. +.... ..|.++|+.+.....++...++ ++||.+.|+. .+++|++++ .++++++
T Consensus 319 ~~~~~----~~~~-----~~~~~-~~g~~~~i~~~~~~~~~~~~l~-~~Gv~v~~~~-----~~~lRi~~~~~~~~~~i~ 382 (396)
T PRK02627 319 RELLE----KYPG-----IKEVR-GLGLMIGIELDRPAAEIVKKAL-EKGLLINVTG-----DNVLRLLPPLIISKEEID 382 (396)
T ss_pred HHHHH----hCCC-----eeeec-cCcEEEEEEecCcHHHHHHHHH-HCCeEEeecC-----CCEEEEECCcccCHHHHH
Confidence 54320 0100 22222 3578889988433345555555 5699999852 478999874 4899999
Q ss_pred HHHHHHHHHhhh
Q 024997 247 LLLHRLDELISK 258 (259)
Q Consensus 247 ~~~~~l~~~l~~ 258 (259)
+++++|.+++++
T Consensus 383 ~~~~~l~~~l~~ 394 (396)
T PRK02627 383 EAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 122
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.88 E-value=1.9e-21 Score=168.40 Aligned_cols=226 Identities=11% Similarity=0.099 Sum_probs=150.5
Q ss_pred cccchhhhhhccCccc--------ccccChhhhcccCC-------CCceEEEEcCCCCCChhhH-----HHhhcCCCcEE
Q 024997 4 YPLYQEQTDYFESVDY--------KFEGEANLWGNASS-------DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKS 63 (259)
Q Consensus 4 y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~-------~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~v 63 (259)
|+.| ..++..|.++. .+.+|+++|++.++ +++++|++++|+||||.+. .++|+++|+++
T Consensus 101 ~s~~-~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~l 179 (370)
T TIGR02539 101 YTSY-VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPL 179 (370)
T ss_pred HHHH-HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeE
Confidence 5555 34566676542 25578999988874 3678999999999999987 38999999999
Q ss_pred EeeccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCC--------CCHHHHHHH
Q 024997 64 IYDHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMG--------VSRECQLRA 134 (259)
Q Consensus 64 i~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~q~~~ 134 (259)
|+||+|-... .+.. ...+..++++|+||.++ +|.|+||++++ +++++.+.+........ .....+.++
T Consensus 180 ivDea~~~g~-~~~~~~~~~~di~v~s~sK~~~-~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (370)
T TIGR02539 180 LLNCAYTVGR-MPVSAKEIGADFIVGSGHKSMA-ASGPCGVLGMS-EEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTM 256 (370)
T ss_pred EEECccccCC-cCCCHHHcCCCEEEeeCccccc-CCCCEEEEEEC-HHHHhhhcccccCCccceeeeecccccccHHHHH
Confidence 9999993111 1111 12345788899999998 67789999999 69999888765432111 111134444
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccee--eCCCCCeeEEEecCCC-------
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKK--IRPPSPAYAWVKCERE------- 205 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------- 205 (259)
...++. ..+++.+..+.++. .+++.+.|++++ +.. ..+..+.+++++++..
T Consensus 257 ~~al~~-----~~~~l~~~~~~~~~-~~~l~~~L~~~g--------------~~~~~~~~s~t~~v~~~~~~~~~~~~~~ 316 (370)
T TIGR02539 257 MASFPH-----VVERVKRWDEEVKK-TRWFVAELEDIG--------------FIQLGQKPKEHDLVKFETPGFHEIAQKH 316 (370)
T ss_pred HHHHHH-----HHHHHHHHHHHHHH-HHHHHHHHHhCC--------------cEEEccCCCcCceEEEECCchhHHhhhh
Confidence 444542 12344444444444 457888888765 221 1345677777776532
Q ss_pred --chHHHHHHHHHcCee-eecCCcccCCCCeEEEEe-ecChhhHHHHHHHHHHHhhh
Q 024997 206 --EDKDCYGILKAAKII-GREGKKFRAEARFVRLSL-LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 --~~~~~~~ll~~~gi~-~~~g~~f~~~~~~~Ris~-~~~~~~~~~~~~~l~~~l~~ 258 (259)
....+.+.|.++||. +++ +. ++++|+|+ +.++++++++++.|++++++
T Consensus 317 ~~~~~~~~~~L~e~GI~~ir~----~~-~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 317 KRRGYFLYEELKKRGIHGIRS----GQ-TKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ccccHHHHHHHHhCCCccccC----Cc-ceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 123466667778997 554 22 46999996 34999999999999998764
No 123
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=1.8e-21 Score=169.60 Aligned_cols=212 Identities=14% Similarity=0.098 Sum_probs=143.8
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChh-hH--------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEecc
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQ-MN--------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTI 90 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~-~~--------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~ 90 (259)
.|++.+++.+++++++|+++.++||+|. ++ .++|+++|+++|+||+| |+.....+. ...+...-+.|+
T Consensus 163 ~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~ 242 (389)
T PRK01278 163 GDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAV 242 (389)
T ss_pred CCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEE
Confidence 5788899988888899888877888883 33 28999999999999999 321111111 011111115689
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
||.++ +|+|+||++++ +++.+.+.......+.+.+++.|.++.+.++...+ ++ ..+.++++.+.+.+.|+.
T Consensus 243 sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~----~~~~~~~~~~~l~~~l~~ 313 (389)
T PRK01278 243 AKGIG-GGFPLGACLAT-EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA---PG----FLDNVQRMGLYLKQKLEG 313 (389)
T ss_pred ehhcc-CCcceEEEEEc-HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhh---hH----HHHHHHHHHHHHHHHHHH
Confidence 99998 89999999999 69988887666667788999999999888874311 11 234445555555555544
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLL 248 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~ 248 (259)
+.. .+++ .+....+ .|.++++.+...+.++..+++ ++||.+.|+ +.+++||++. .++++++++
T Consensus 314 l~~----~~~~----~~~~v~g-~G~~~~i~~~~~~~~~~~~l~-~~GV~~~p~-----~~~~lR~~p~~~~~~~~i~~~ 378 (389)
T PRK01278 314 LVD----RFPD----VIEEVRG-KGLLLGLKCVVPNRDLVQALR-DEGLLTVGA-----GDNVVRLLPPLIITEEEIDEA 378 (389)
T ss_pred HHh----hCCC----ceeeEec-ccEEEEEEEecCHHHHHHHHH-HCCeEEeec-----CCCEEEEeCCcccCHHHHHHH
Confidence 321 0110 1222333 567777777543345555655 569999985 2579999964 489999999
Q ss_pred HHHHHHHhhh
Q 024997 249 LHRLDELISK 258 (259)
Q Consensus 249 ~~~l~~~l~~ 258 (259)
+++|.+++++
T Consensus 379 l~~l~~~l~~ 388 (389)
T PRK01278 379 LERLERAAES 388 (389)
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 124
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=3.8e-21 Score=167.94 Aligned_cols=232 Identities=9% Similarity=0.037 Sum_probs=156.6
Q ss_pred CCCcccchhhhhhccCcccccc-cChhhhcccCC----C--CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-GEANLWGNASS----D--THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~----~--~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..+..+..+. .|++++++.++ + +++++++.+.+||+|... .++|+++|+++|+||+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~ 212 (397)
T PRK06939 133 ALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDS 212 (397)
T ss_pred hhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECc
Confidence 5889988888888887664432 57777777663 3 677877777789999865 3899999999999999
Q ss_pred c-cC---CCCC---CCCC-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh--cCCCCHHHHHHHHHHH
Q 024997 69 Y-FW---PHFA---PIPA-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN--TMGVSRECQLRAFKLL 138 (259)
Q Consensus 69 y-~~---~~~~---~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l 138 (259)
| ++ .... ...+ ..+.+++++|+||.++ |+|+||++++ +++++.+....... ....++..+.++.+++
T Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al 289 (397)
T PRK06939 213 HAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR-KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVL 289 (397)
T ss_pred ccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC-HHHHHHHHHhCccccccCCCCHHHHHHHHHHH
Confidence 9 31 1111 1112 2245799999999994 5699999999 69999887653321 1223344455555556
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C-chHHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E-EDKDCYGILKA 216 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ll~~ 216 (259)
+.. . ...+.+++++++++.+.+.|+.++ +....+.++++.+ .++. . +.++...++ +
T Consensus 290 ~~~-----~-~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~-~ 347 (397)
T PRK06939 290 ELL-----E-ESDELRDRLWENARYFREGMTAAG--------------FTLGPGEHPIIPV-MLGDAKLAQEFADRLL-E 347 (397)
T ss_pred HHH-----h-cCHHHHHHHHHHHHHHHHHHHHcC--------------CCcCCCCCCEEEE-EECCHHHHHHHHHHHH-H
Confidence 532 1 124567889999999999998753 2223445555433 3432 1 234555555 5
Q ss_pred cCeeeecCCcccC---CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 217 AKIIGREGKKFRA---EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ~gi~~~~g~~f~~---~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+||.+.++. |+. +.+++|++++. +++++++++++|++++++
T Consensus 348 ~gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 348 EGVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred CCceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 699998643 432 34689999853 899999999999998864
No 125
>PLN02483 serine palmitoyltransferase
Probab=99.88 E-value=1e-20 Score=168.61 Aligned_cols=236 Identities=14% Similarity=0.069 Sum_probs=157.5
Q ss_pred CCCcccchhhhhhccCcccccc-cChhhhcccCC-------CC-----ceEEEEcCC-CCCChhhH-----HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-GEANLWGNASS-------DT-----HLVEFVTAP-NNPDGQMN-----KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~-------~~-----~~~i~i~~p-~NPtG~~~-----~~la~~~~~ 61 (259)
+|+|+.+...++..|.++..+. .|++.|++.++ ++ .++++++++ .|++|.+. .++|+++|+
T Consensus 192 ~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~ 271 (489)
T PLN02483 192 SLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKA 271 (489)
T ss_pred chhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCC
Confidence 4788888888888888775553 34555554431 22 255555555 59999887 389999999
Q ss_pred EEEeeccc-c---CCCCC---CCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh---hcCCCCHH
Q 024997 62 KSIYDHAY-F---WPHFA---PIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL---NTMGVSRE 129 (259)
Q Consensus 62 ~vi~De~y-~---~~~~~---~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~---~~~~~~~~ 129 (259)
++|+||+| + ++... ... ...+.+|+++||||+||.+| ||++++ +++++.+...... .....++.
T Consensus 272 ~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~-~~li~~l~~~~~~~~~~~~~~p~~ 347 (489)
T PLN02483 272 YVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKRTCPAHLYATSMSPPA 347 (489)
T ss_pred EEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcC-HHHHHHHHHhCccccccCCcCHHH
Confidence 99999999 2 22111 111 23467899999999999888 999999 7999999876432 11223334
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--ch
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--ED 207 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 207 (259)
.| ++.+.++.....+..+...+.+++++++++.+.+.|++++ +....+.++..+|+.+... ..
T Consensus 348 ~~-~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G--------------~~v~~~~~sp~~~l~l~~~~~~~ 412 (489)
T PLN02483 348 VQ-QVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMG--------------FEVLGDNDSPVMPIMLYNPAKIP 412 (489)
T ss_pred HH-HHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCCCCEEEEEECCHHHHH
Confidence 44 3455554332112234555668899999999999999864 2233344445555544322 23
Q ss_pred HHHHHHHHHcCeeeecCCcccC---CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRA---EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~---~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
++...++ ++||.+++ ..|+. ..+.+|++++. +++++++++++|++++.
T Consensus 413 ~~~~~Ll-~~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~ 465 (489)
T PLN02483 413 AFSRECL-KQNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVGD 465 (489)
T ss_pred HHHHHHH-HCCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5555555 57999997 55532 24789999964 89999999999998764
No 126
>PLN02822 serine palmitoyltransferase
Probab=99.88 E-value=5.5e-21 Score=170.06 Aligned_cols=199 Identities=12% Similarity=0.062 Sum_probs=148.9
Q ss_pred eEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-c---CCCCCCCC---C--CCCCeEEEeccccccCCCcceEE
Q 024997 37 LVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-F---WPHFAPIP---A--PADEELMIFTISKLTGHAGSRFG 102 (259)
Q Consensus 37 ~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~---~~~~~~~~---~--~~~~~i~~~S~SK~~g~~G~R~G 102 (259)
++|++..++|++|.+.+ ++|++||+++|+||+| + +.....+. + ..+.+++++||||.+|.+| |
T Consensus 247 ~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G 323 (481)
T PLN02822 247 RYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---G 323 (481)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---e
Confidence 78888899999999983 8999999999999999 3 32221111 1 2356799999999999999 9
Q ss_pred EEEecCHHHHHHHHHhhhhhcCCC--CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 103 WAVIKDEAVYQRMSAYISLNTMGV--SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
|++++ +++++.++......+++. ++..|.++.++++.. +. ..+.+++++++++.+.+.|+++.+
T Consensus 324 ~i~g~-~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-----~~-~~~~~~~l~~~~~~l~~~L~~~~g------- 389 (481)
T PLN02822 324 FCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-----ED-NPSVLAKLKENIALLHKGLSDIPG------- 389 (481)
T ss_pred EEEcC-HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-----Hh-CHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 99999 799998876554444443 477788887888742 11 245788999999999999987643
Q ss_pred ccccccceeeCCCCCeeEEEecCCC------c----hHHHHHHHHHcCeeeecC--CcccC--CCCeEEEEee--cChhh
Q 024997 181 PQYCTYFKKIRPPSPAYAWVKCERE------E----DKDCYGILKAAKIIGREG--KKFRA--EARFVRLSLL--KSQDD 244 (259)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~ll~~~gi~~~~g--~~f~~--~~~~~Ris~~--~~~~~ 244 (259)
+....+.+++++++.+++. + .+++.++++++||.+.|+ ..|+. .+.++|++++ .++++
T Consensus 390 ------~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~ed 463 (481)
T PLN02822 390 ------LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESD 463 (481)
T ss_pred ------cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHH
Confidence 3344566788888888642 1 356777777889999986 44442 2468999876 49999
Q ss_pred HHHHHHHHHHHhhh
Q 024997 245 FDLLLHRLDELISK 258 (259)
Q Consensus 245 ~~~~~~~l~~~l~~ 258 (259)
|++++++|++++++
T Consensus 464 I~~~~~~l~~~~~~ 477 (481)
T PLN02822 464 ILKASESLKRVAAS 477 (481)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988753
No 127
>PRK06460 hypothetical protein; Provisional
Probab=99.87 E-value=7.9e-21 Score=164.42 Aligned_cols=168 Identities=14% Similarity=0.127 Sum_probs=122.2
Q ss_pred CCcccchhhhhhccCcccccccCh-hhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCC
Q 024997 2 PFYPLYQEQTDYFESVDYKFEGEA-NLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFA 75 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~~~~~d~-~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~ 75 (259)
|+|..|...++..|.++..+..+. +.+++.++++++++++++||||||.+++ ++|+++|+++|+|++|..+ ..
T Consensus 96 ~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~-~~ 174 (376)
T PRK06460 96 RSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTP-IN 174 (376)
T ss_pred cHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcc-cc
Confidence 456666777777887765554443 3344545678999999999999999983 8899999999999998422 11
Q ss_pred CCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 024997 76 PIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGY 154 (259)
Q Consensus 76 ~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 154 (259)
..+...+.+++++|+||.++ +.|.|.||++++ +++++.+++.....+.+.++...+ .+++ ..++++.++
T Consensus 175 ~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~-~~l~~~l~~~~~~~g~~~~~~~a~---~~l~------~~~~l~~r~ 244 (376)
T PRK06460 175 QKPLELGADIVVHSASKFLAGHNDVIAGLAAGY-GKLLNVIDQMRRTLGTSLDPHAAY---LTLR------GIKTLKIRM 244 (376)
T ss_pred CChhhcCCCEEEeecceeccCCCCceEEEEecC-HHHHHHHHHHHHhcCCCCCHHHHH---HHHh------chhhHHHHH
Confidence 11112346799999999985 334789999998 799999988777666666654332 2333 335788889
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
+++.++++.+.+.|++.+.+.....|
T Consensus 245 ~~~~~n~~~l~~~L~~~p~v~~v~yp 270 (376)
T PRK06460 245 DVINRNAEQIAEFLEGHPKVVKVYYP 270 (376)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECC
Confidence 99999999999999998876544443
No 128
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.87 E-value=6.8e-21 Score=166.71 Aligned_cols=208 Identities=12% Similarity=0.038 Sum_probs=148.0
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCC--CCCCCCCCCCCeEEEec
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWP--HFAPIPAPADEELMIFT 89 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~--~~~~~~~~~~~~i~~~S 89 (259)
|++.+++.+.+++++|+++ |.||+|.++ .++|+++|+++|+||+| |+. ...... ..+...-+.|
T Consensus 173 d~~~l~~~l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~-~~~~~pdi~s 250 (403)
T PRK05093 173 DLAAVKAVIDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYM-HYGVTPDILT 250 (403)
T ss_pred CHHHHHHHhcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhh-hcCCCCCEEE
Confidence 6788888887778885555 899888765 28999999999999999 321 111111 1111111679
Q ss_pred cccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 90 ISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 90 ~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
|||.++ +|+|+||++++ +++++.+.......+.+.+++.|.++.+.|+... . .+.++.++++.+.+.+.|+
T Consensus 251 ~sK~l~-~G~rig~vv~~-~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~----~~~~~~~~~~~~~l~~~L~ 321 (403)
T PRK05093 251 SAKALG-GGFPIGAMLTT-AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---T----PEVLEGVKARRQRFVDGLQ 321 (403)
T ss_pred eccccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---h----ccHHHHHHHHHHHHHHHHH
Confidence 999998 99999999999 6999988765555567889999999999887431 1 2346788899999999988
Q ss_pred hcCCCccccccccccccceeeCCCCCeeEEEecCCC----chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChh
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQD 243 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~ 243 (259)
++.. .. ++....+..|+++|+.++.. +.++...++ ++||.+.|+ +.+++||+++ .+++
T Consensus 322 ~~~~-~~---------~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~~lRl~~~~~~~~~ 385 (403)
T PRK05093 322 KINQ-KY---------GVFSEIRGMGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVA-----GPDVLRFAPSLVIEEA 385 (403)
T ss_pred HHHh-hC---------CCeEeEeeCceEEEEEecCcchhHHHHHHHHHH-HCCeEEecC-----CCCEEEEeCCCCCCHH
Confidence 7531 00 01122445688899987532 234555555 579999873 3479999754 3899
Q ss_pred hHHHHHHHHHHHhhh
Q 024997 244 DFDLLLHRLDELISK 258 (259)
Q Consensus 244 ~~~~~~~~l~~~l~~ 258 (259)
++++++++|.+++.+
T Consensus 386 ~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 386 DIDEGLARFEKAVAK 400 (403)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998753
No 129
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=7.1e-21 Score=162.60 Aligned_cols=200 Identities=12% Similarity=0.066 Sum_probs=139.8
Q ss_pred ccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccc-cCCC---CCCCC---
Q 024997 20 KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAY-FWPH---FAPIP--- 78 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y-~~~~---~~~~~--- 78 (259)
.|.+|+++|++.+++ +++++++|||+| |.+++ ++|+++++++++||+| |... .....
T Consensus 108 ~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~--G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~ 185 (333)
T PRK10534 108 DGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN--GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT 185 (333)
T ss_pred CCCCCHHHHHHhhcccCcCcccceEEEEecCCC--CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH
Confidence 478889999988865 588999997764 99873 5788999999999998 3210 11111
Q ss_pred CCCCCeEEEeccccccCCCcceEE-EEEecCHHHHHHHHHhhhhhcCC--CCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 024997 79 APADEELMIFTISKLTGHAGSRFG-WAVIKDEAVYQRMSAYISLNTMG--VSRECQLRAFKLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 79 ~~~~~~i~~~S~SK~~g~~G~R~G-~i~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 155 (259)
...+. ++.||||.+|++ +| |++++ +++++.++........+ .+.+.|.++...++. . .+.++
T Consensus 186 ~~~~~--~~~s~SK~~~~~---~G~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--------~-~~~~~ 250 (333)
T PRK10534 186 QYCDS--FTICLSKGLGTP---VGSLLVGN-RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH--------N-VARLQ 250 (333)
T ss_pred hcCCE--EEEEeEcCCCCc---ccceEEcC-HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh--------h-HHHHH
Confidence 11222 234899998754 68 68778 79999998877654322 234556666666652 1 22344
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
+..++++.+.+.|++++ +.+.++ .++|+|++++..+.+.+.++|.++||.++|+. ++|
T Consensus 251 ~~~~~r~~l~~~L~~~g--------------~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~-------~~r 308 (333)
T PRK10534 251 EDHDNAAWLAEQLREAG--------------ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASP-------IVR 308 (333)
T ss_pred HHHHHHHHHHHHHHhCC--------------CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCc-------eEE
Confidence 45556788888888764 333444 68899999874334566788888999999853 578
Q ss_pred EEee--cChhhHHHHHHHHHHHhhh
Q 024997 236 LSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 236 is~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
++.. .+++++++++++|++++.+
T Consensus 309 l~~~~r~t~e~~~~~~~~l~~~~~~ 333 (333)
T PRK10534 309 LVTHLDVSREQLAEVVAHWRAFLAR 333 (333)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhcC
Confidence 8774 3899999999999998764
No 130
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.87 E-value=1.8e-20 Score=162.86 Aligned_cols=227 Identities=15% Similarity=0.091 Sum_probs=155.0
Q ss_pred CCCcccchhhhhhccCcc----------ccccc----ChhhhcccCCCCceEEEEcCCCCCChhh-H--------HHhhc
Q 024997 1 MPFYPLYQEQTDYFESVD----------YKFEG----EANLWGNASSDTHLVEFVTAPNNPDGQM-N--------KAVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~----------~~~~~----d~~~l~~~~~~~~~~i~i~~p~NPtG~~-~--------~~la~ 57 (259)
+|+|..|...+...+... ..+.. |++.|++.+++++++++++.++||+|.. + .++|+
T Consensus 122 ~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~ 201 (379)
T TIGR00707 122 ENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICK 201 (379)
T ss_pred CCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHH
Confidence 467777766655543321 11222 7888988887788887886556677753 2 37899
Q ss_pred CCCcEEEeeccc--cCCC--CCCC--CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH
Q 024997 58 GPYAKSIYDHAY--FWPH--FAPI--PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 58 ~~~~~vi~De~y--~~~~--~~~~--~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
++|+++|+||+| |... .... .+..+. +.||||.++ +|+|+||++++ +++++.+.........+.+++.|
T Consensus 202 ~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d---~~t~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 276 (379)
T TIGR00707 202 DKDALLIFDEVQTGIGRTGKFFAYEHYGIEPD---IITLAKGLG-GGVPIGATLAK-EEVAEAFTPGDHGSTFGGNPLAC 276 (379)
T ss_pred HcCCEEEEeccccCCCccchhhhHHhcCCCCC---EEEEccccc-CCcccEEEEEc-HHHHhhhcCCCCCCCCCCCHHHH
Confidence 999999999999 4221 1111 122222 337999999 99999999999 69999987754445677899999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCY 211 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (259)
.++.++++... . ...++.++++++.+.+.|+++.. ... +.. .+..|.++|+.++.. ...+.
T Consensus 277 ~aa~aaL~~~~---~----~~~~~~~~~~~~~~~~~l~~~~~-~~~---------~~~-~~~~g~~~~~~~~~~-~~~~~ 337 (379)
T TIGR00707 277 AAALAVLEVIE---K----ERLLENVKEKGDYFKERLEELGK-NYP---------NKE-VRGKGLMLGIELEAP-CKDIV 337 (379)
T ss_pred HHHHHHHHHHH---h----hhHHHHHHHHHHHHHHHHHHHHh-hCC---------CCc-cccCceEEEEEecCc-HHHHH
Confidence 99998887431 1 23466777788888777775421 000 111 223577888887653 44555
Q ss_pred HHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHh
Q 024997 212 GILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELI 256 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l 256 (259)
+.|.++||.++|+ +.+++||++. .+++++++++++|++.+
T Consensus 338 ~~l~~~Gv~v~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 338 KKALEKGLLVNCA-----GPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred HHHHHCCcEEeeC-----CCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 5567899999984 2478999974 48999999999998764
No 131
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=4.2e-21 Score=158.94 Aligned_cols=234 Identities=14% Similarity=0.101 Sum_probs=173.6
Q ss_pred CCCcccchhhhhhccCccccc--------ccChhhhcccC---CCCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDYKF--------EGEANLWGNAS---SDTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~---~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+||+|..+++..|.++..| .+|.+.+.+.+ .++..+++-..+|||||.-+. ++.++.|.
T Consensus 127 ~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l 206 (396)
T COG1448 127 DPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL 206 (396)
T ss_pred CCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 799999999999999987322 57777776666 346667677778999999982 77889999
Q ss_pred EEEeeccc--cCCCC----CC---CCCCCCCeEEEeccccccCCCcceEEEEE--ecCHHHH----HHHHHhhhhhcCCC
Q 024997 62 KSIYDHAY--FWPHF----AP---IPAPADEELMIFTISKLTGHAGSRFGWAV--IKDEAVY----QRMSAYISLNTMGV 126 (259)
Q Consensus 62 ~vi~De~y--~~~~~----~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~--~~~~~~~----~~~~~~~~~~~~~~ 126 (259)
+.+.|-+| |+... .. +.......++..|+||.||+-|-|+|.+. +.+++.. .+++...+....++
T Consensus 207 ip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnP 286 (396)
T COG1448 207 IPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNP 286 (396)
T ss_pred eeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999 42111 11 11233449999999999999999999754 4444444 44566666666777
Q ss_pred CHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 127 SRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+.-...++..+|+++. ....+..+..+++++.+.|..+.+.|+...- ++. |..+..+.|||.+..+
T Consensus 287 P~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~-------~~~---f~~i~~Q~GMFsy~Gl--- 353 (396)
T COG1448 287 PAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGA-------PRN---FDFIISQRGMFSYTGL--- 353 (396)
T ss_pred chhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-------Ccc---cchHhhcCceeecCCC---
Confidence 7777777777776432 1123445677888888888888888886331 111 6667889999998755
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l 256 (259)
+.+.+..+.+++||.++. .+ |||++. ++.+++...+.+.+++
T Consensus 354 s~~QV~rLree~~IY~v~-----sG----Ri~vaGl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 354 SPEQVDRLREEFGIYLVA-----SG----RINVAGLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred CHHHHHHHHHhccEEEec-----CC----eeeeccCChhhHHHHHHHHHhhC
Confidence 689999999999999886 33 999988 9999999999988763
No 132
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.87 E-value=7.2e-21 Score=166.19 Aligned_cols=208 Identities=11% Similarity=0.081 Sum_probs=148.0
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccc
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTIS 91 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~S 91 (259)
|++.|++.++++++++++++|+||+|.+++ ++|+++|+++|+||+| |+.....+. +..+...-+.++|
T Consensus 175 d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~s 254 (396)
T PRK04073 175 DLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILG 254 (396)
T ss_pred CHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEec
Confidence 678888888888899888888999999862 7899999999999999 422111111 1111112245689
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc
Q 024997 92 KLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS 171 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (259)
|.+|..|+|+||++++ +++.+.+.......+++.+++.|+++.+.|+... .++ ..++.+++.+.+.+.|+++
T Consensus 255 K~lg~gg~~ig~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~---~~~----l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 255 KALGGGVFPISCVAAN-RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLE---EEK----LPERSLELGEYFKEQLKEI 326 (396)
T ss_pred ccccCCCCcceEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hcC----HHHHHHHHHHHHHHHHHhh
Confidence 9999888999999999 7999988765555678889999999999997531 112 3456677788888888765
Q ss_pred CCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHH
Q 024997 172 NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLL 249 (259)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~ 249 (259)
.. . .+....+. |.++++++.....++... |.++||.+.+. +++++||++ ..+++++++++
T Consensus 327 ~~---~--------~i~~~~~~-g~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-----~~~~iRi~p~l~~t~e~i~~~~ 388 (396)
T PRK04073 327 DN---P--------MIKEVRGR-GLFIGVELNEPARPYCEA-LKEEGLLCKET-----HETVIRFAPPLVITKEELDWAF 388 (396)
T ss_pred cC---C--------cccceecc-eEEEEEEecchHHHHHHH-HHHCCeEEecC-----CCCEEEEECCcccCHHHHHHHH
Confidence 31 0 02223333 566788776433444444 55689998762 247999995 45999999999
Q ss_pred HHHHHHhh
Q 024997 250 HRLDELIS 257 (259)
Q Consensus 250 ~~l~~~l~ 257 (259)
++|+++++
T Consensus 389 ~~l~~~l~ 396 (396)
T PRK04073 389 EKIKAVLS 396 (396)
T ss_pred HHHHHHhC
Confidence 99998874
No 133
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.86 E-value=4.8e-20 Score=161.39 Aligned_cols=237 Identities=11% Similarity=0.009 Sum_probs=161.9
Q ss_pred CCCcccchhh-----hhhccCcc-------c--ccccChhhhcccC-CCCceEEEEcCCCCCChhhH---HHhhcCCCcE
Q 024997 1 MPFYPLYQEQ-----TDYFESVD-------Y--KFEGEANLWGNAS-SDTHLVEFVTAPNNPDGQMN---KAVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~-----~~~~g~~~-------~--~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~---~~la~~~~~~ 62 (259)
+|+|+.+... ++..|... . .+.+|++++++.+ .++++++++++|+||+..-+ .++|+++|++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~ 191 (402)
T cd00378 112 DLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAY 191 (402)
T ss_pred cCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCE
Confidence 4677766444 44445321 2 4778999999988 46889989999999876444 4889999999
Q ss_pred EEeecccc-C---CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH-HHHHHH
Q 024997 63 SIYDHAYF-W---PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ-LRAFKL 137 (259)
Q Consensus 63 vi~De~y~-~---~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q-~~~~~~ 137 (259)
+|+|++|+ + .......-. ...++++|+||.+ +|+|.||++++++++++.+.........+.+.+.+ .++..+
T Consensus 192 li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a 268 (402)
T cd00378 192 LLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVA 268 (402)
T ss_pred EEEEccchhhhhhcccCCCccc-CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHH
Confidence 99999973 1 111111111 3357899999987 68899999998448998887765433333333333 333333
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee-CCCCCeeEEEecCCC--chHHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI-RPPSPAYAWVKCERE--EDKDCYGIL 214 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~ll 214 (259)
+... ......+.+++++++++.+.+.|++++ +... .+.+++++|++++.. +.+.+.++|
T Consensus 269 l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l 330 (402)
T cd00378 269 LKEA----LEPEFKAYAKQVVENAKALAEALKERG--------------FKVVSGGTDNHLVLVDLRPKGITGKAAEDAL 330 (402)
T ss_pred HHHH----hhHHHHHHHHHHHHHHHHHHHHHHhCC--------------CeEeecCCCCeEEEEeCCccCCCHHHHHHHH
Confidence 4321 112456677889999999999998764 3332 456789999999742 456677788
Q ss_pred HHcCeeeecCCc----ccC-CCCeEEEEeec------ChhhHHHHHHHHHHHhhh
Q 024997 215 KAAKIIGREGKK----FRA-EARFVRLSLLK------SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 215 ~~~gi~~~~g~~----f~~-~~~~~Ris~~~------~~~~~~~~~~~l~~~l~~ 258 (259)
+++||.+.++.. ++. ...++|+++.. +.++++.+++.|++++.+
T Consensus 331 ~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 331 EEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred HHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 899999986432 211 34689999844 489999999999997753
No 134
>PRK02948 cysteine desulfurase; Provisional
Probab=99.86 E-value=4.5e-21 Score=166.71 Aligned_cols=219 Identities=14% Similarity=0.057 Sum_probs=149.3
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~ 94 (259)
+.+|++.|++.++++++++++++|+||||.+++ ++|+++|+++++|+++ |+.....+ ...+.++++.|+||.+
T Consensus 124 ~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~-~~~~~d~~~~s~~K~~ 202 (381)
T PRK02948 124 GLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDV-FEMGIDSLSVSAHKIY 202 (381)
T ss_pred CCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCc-ccCCCCEEEecHHhcC
Confidence 467889999998888999999999999999994 8899999999999866 43211122 2345788999999999
Q ss_pred CCCcceEEEEEecCHHH-HHHHHH----hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAV-YQRMSA----YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~-~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
|.+| +|++++.+ ++ +..+.. ........++.+.+.++..+++.. .+++++.+++++++++++.+.|+
T Consensus 203 gp~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~~l~~~L~ 274 (381)
T PRK02948 203 GPKG--VGAVYINP-QVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-----LKNMQEESLRFKELRSYFLEQIQ 274 (381)
T ss_pred CCCc--EEEEEEcC-CCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 9889 89998884 54 111110 001123457778888888888742 23567788999999999999998
Q ss_pred hcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC------------------CC
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA------------------EA 231 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~------------------~~ 231 (259)
+++ +.+....+ .+ ..-+..+-+.++..+.+.+...|+++||.++.|..+.. ..
T Consensus 275 ~~~-~~v~~~~~--~~------~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~ 345 (381)
T PRK02948 275 TLP-LPIEVEGH--ST------SCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAK 345 (381)
T ss_pred cCC-CCEEEeCC--Cc------cCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhC
Confidence 764 11110000 00 00011222233333344444556788999999875321 14
Q ss_pred CeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 232 RFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 232 ~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+++|+|++. ++++++.+++.|+++++
T Consensus 346 ~~lRis~~~~~t~~di~~l~~~l~~~~~ 373 (381)
T PRK02948 346 QFVRFSFGQQTTKDQIDTTIHALETIGN 373 (381)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 789999975 89999999999988765
No 135
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=3.2e-20 Score=161.59 Aligned_cols=231 Identities=10% Similarity=0.011 Sum_probs=156.7
Q ss_pred CCCcccchhhhhhccCccccc-ccChhhhcccCC----CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-EGEANLWGNASS----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY- 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y- 69 (259)
+|+|+.+...+...|.+...+ .+|++++++.+. ++++++++++++||||.+. .++|+++|+++|+||+|
T Consensus 124 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~ 203 (385)
T TIGR01825 124 ELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHG 203 (385)
T ss_pred ccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECccc
Confidence 467887777777667665433 578877877663 3688888888899999877 38999999999999999
Q ss_pred -c--CCCCC----CCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh-hh-cCCCCHHHHHHHHHHHHH
Q 024997 70 -F--WPHFA----PIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS-LN-TMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 70 -~--~~~~~----~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~q~~~~~~l~~ 140 (259)
+ ..... .+.-..+.+++++||||.+|.+| ||++++ +++++.+..... .. +...+++.|.++.++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 279 (385)
T TIGR01825 204 SGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH-KELIEYLKNRARPFLFSTAQPPAVVAALAAAVDE 279 (385)
T ss_pred ccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC-HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHH
Confidence 2 11110 11112567999999999998777 999988 699998876543 21 223456777777777763
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcC
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAK 218 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~g 218 (259)
. .+. .+..+++.++++.+.+.|++++ ++...+.++ ++.+.+... +.++...++ ++|
T Consensus 280 ~-----~~~-~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~-~~g 337 (385)
T TIGR01825 280 L-----QRS-PELMERLWDNTRFFKAGLGKLG--------------YDTGGSETP-ITPVVIGDEKAAQEFSRRLF-DEG 337 (385)
T ss_pred H-----hcC-HHHHHHHHHHHHHHHHHHHHcC--------------CCCCCCCCC-EEEEEECCHHHHHHHHHHHH-HCC
Confidence 2 111 2356677788888999888753 223344444 333334321 234555555 459
Q ss_pred eeeecCCcccC---CCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 219 IIGREGKKFRA---EARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 219 i~~~~g~~f~~---~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
|.++ +..|+. +.+++|+++. .+++++++++++|++++++
T Consensus 338 i~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 338 IFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred cEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 9885 444442 3468999874 4999999999999998753
No 136
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.86 E-value=3.2e-20 Score=162.78 Aligned_cols=210 Identities=13% Similarity=0.084 Sum_probs=148.3
Q ss_pred cChhhhcccCC----CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc----cCCCCCCCC---CC-CCCeE
Q 024997 23 GEANLWGNASS----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY----FWPHFAPIP---AP-ADEEL 85 (259)
Q Consensus 23 ~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y----~~~~~~~~~---~~-~~~~i 85 (259)
.|++.|++.++ +++++|++++|+||+|.+. .++|+++|+++|+||+| |++....+. +. .+.++
T Consensus 162 ~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~di 241 (407)
T PRK09064 162 NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDI 241 (407)
T ss_pred CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeE
Confidence 46667776663 4678999999999999886 38999999999999999 233222221 21 23478
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
+++||||.||++| ||++++ +++++.+...... .+.+.++..+.++.+.++.. +. ....+++++++++.
T Consensus 242 v~~t~sKa~g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~-----~~-~~~~~~~~~~~~~~ 311 (407)
T PRK09064 242 IEGTLAKAFGVMG---GYIAGS-AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHL-----KE-SNEERERHQERAAK 311 (407)
T ss_pred EEEecchhhhccC---ceEecC-HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHH-----hc-CHHHHHHHHHHHHH
Confidence 8999999999888 999998 6999988765432 24466777777777777642 11 13346788899999
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEee
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLL 239 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~ 239 (259)
+.+.|++++ +....+. +.++++.+... ..++...+++++||.+++...... +.+++|+|+.
T Consensus 312 l~~~L~~~g--------------~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~ 376 (407)
T PRK09064 312 LKAALDAAG--------------IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPT 376 (407)
T ss_pred HHHHHHHcC--------------CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeC
Confidence 999998754 2222333 34455555432 234555566667999998653322 3468999985
Q ss_pred c--ChhhHHHHHHHHHHHhh
Q 024997 240 K--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 ~--~~~~~~~~~~~l~~~l~ 257 (259)
. ++++++.+++.|++++.
T Consensus 377 ~~~t~edi~~l~~~l~~~~~ 396 (407)
T PRK09064 377 PFHTDEMIDHLVEALVEVWA 396 (407)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 3 89999999999998865
No 137
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.86 E-value=5.2e-20 Score=160.13 Aligned_cols=231 Identities=12% Similarity=0.051 Sum_probs=159.0
Q ss_pred CCCcccchhhhhhccCccccc-ccChhhhcccCCC---CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-c
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-EGEANLWGNASSD---THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-~ 70 (259)
+|+|+.+...++..|.++..+ ..|++.+++.+++ .+.++++.+++||||... .++|+++|+++|+||+| +
T Consensus 130 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 130 KLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred CccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 478888888888777765433 3477888888743 466767777899999876 38999999999999999 2
Q ss_pred ---CCCCCC-C---C-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHH
Q 024997 71 ---WPHFAP-I---P-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 71 ---~~~~~~-~---~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 140 (259)
...... . . ...+++++++|+||.+|.+| ||++++ +++.+.+...... .+.+.++..+.++.++++.
T Consensus 210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~ 285 (385)
T PRK05958 210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS-ETLIDYLINRARPFIFTTALPPAQAAAARAALRI 285 (385)
T ss_pred cccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH
Confidence 211111 0 0 23456899999999999877 999988 6998887654322 1233455555556566663
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCe
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKI 219 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi 219 (259)
. ... .+..+++.++++.+.+.|++++ ++...+ .+.++++.++.. +...+.+.|.++||
T Consensus 286 ~-----~~~-~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI 344 (385)
T PRK05958 286 L-----RRE-PERRERLAALIARLRAGLRALG--------------FQLMDS-QSAIQPLIVGDNERALALAAALQEQGF 344 (385)
T ss_pred H-----hcC-HHHHHHHHHHHHHHHHHHHHcC--------------CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCc
Confidence 2 111 4567888999999999998754 222344 445667777642 23334444557899
Q ss_pred eeecCCcccC--CCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 220 IGREGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 220 ~~~~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.++++..+.. +++++|+|++. +++++++++++|++++
T Consensus 345 ~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 345 WVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred eEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 9998654432 35799999973 8999999999998764
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.86 E-value=4.2e-20 Score=158.64 Aligned_cols=231 Identities=15% Similarity=0.085 Sum_probs=158.7
Q ss_pred CCCcccchhhhhhccCccccc-ccChhhhcccCC-----CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-EGEANLWGNASS-----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~-----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
+|.|+.+...++..|.+...+ .+|.+.+++.++ ++++++++++|+||||... .++|+++|+++|+|++|
T Consensus 92 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~ 171 (349)
T cd06454 92 SLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAH 171 (349)
T ss_pred hhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccc
Confidence 367777777777778776543 457777887773 3578888899999999887 38999999999999998
Q ss_pred -c---CCCCC---CCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh--cCCCCHHHHHHHHHHHH
Q 024997 70 -F---WPHFA---PIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN--TMGVSRECQLRAFKLLK 139 (259)
Q Consensus 70 -~---~~~~~---~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~ 139 (259)
+ .+... ... ...+.+++++|+||.++.+| ||++.+ +++.+.+....... +...+++.+.++.+.++
T Consensus 172 ~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 247 (349)
T cd06454 172 SVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS-KELIDYLRSYARGFIFSTSLPPAVAAAALAALE 247 (349)
T ss_pred cccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC-HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHH
Confidence 2 11111 111 23467899999999998766 999988 68888877654322 23456666667777776
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC-CCchHHHHHHHHHcC
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE-REEDKDCYGILKAAK 218 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~g 218 (259)
.. .. ....+++++++++.+.+.|++++ +....+.++...++.++ ..+.+.+.+.|.++|
T Consensus 248 ~~-----~~-~~~~~~~~~~~~~~l~~~l~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 307 (349)
T cd06454 248 VL-----QG-GPERRERLQENVRYLRRGLKELG--------------FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERG 307 (349)
T ss_pred HH-----hc-CHHHHHHHHHHHHHHHHHHHhcC--------------CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCC
Confidence 42 11 45567888899999999888753 22223334444444343 223344555555679
Q ss_pred eeeecCCccc--CCCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 219 IIGREGKKFR--AEARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 219 i~~~~g~~f~--~~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
|.++++.... .+.+++|++++. +++++++++++|+++
T Consensus 308 I~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 308 IYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9998863221 124799999975 899999999999864
No 139
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.86 E-value=3.9e-20 Score=162.19 Aligned_cols=229 Identities=17% Similarity=0.087 Sum_probs=155.7
Q ss_pred cchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc-CCC
Q 024997 6 LYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF-WPH 73 (259)
Q Consensus 6 ~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~-~~~ 73 (259)
+|...++..|.++. ++.+|+++|++.++++++++++++|+||||.+++ ++|+++|+++++|++|. +..
T Consensus 129 ~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~ 208 (406)
T PRK09295 129 PWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH 208 (406)
T ss_pred HHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcc
Confidence 45555566676542 2457888999999889999999999999999983 88999999999999983 211
Q ss_pred CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh----------------------hhcCCCCHHHH
Q 024997 74 FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS----------------------LNTMGVSRECQ 131 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~q 131 (259)
...+ ...+.++++.|++|.+|.+| +||++++ +++++.+..... .....++....
T Consensus 209 ~~~~-~~~~~D~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~ 284 (406)
T PRK09295 209 PVDV-QALDCDFYVFSGHKLYGPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGI 284 (406)
T ss_pred ccCc-hhcCCCEEEeehhhccCCCC--cEEEEEc-hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHH
Confidence 1122 23456799999999988777 8999999 688776532100 01112344455
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC--CCCeeEEEecCCCchHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP--PSPAYAWVKCEREEDKD 209 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 209 (259)
.++.++++...+ .-+++..++.++..+.+.+.|++++++.+ ..+ ..++ +.+.++..+.+.
T Consensus 285 ~~l~~al~~~~~----~g~~~i~~~~~~l~~~l~~~l~~~~~~~~-------------~~~~~~~~i-v~~~~~~~~~~~ 346 (406)
T PRK09295 285 IGLGAALDYVSA----LGLNNIAEYEQNLMHYALSQLESVPDLTL-------------YGPQNRLGV-IAFNLGKHHAYD 346 (406)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHhcCCCEEE-------------eCCCCCceE-EEEEECCcCHHH
Confidence 555555553211 11345567777788888888877654322 222 2333 344455444555
Q ss_pred HHHHHHHcCeeeecCCcccC-------CCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 210 CYGILKAAKIIGREGKKFRA-------EARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-------~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
+...|+++||.++.|..+.. .++.+|+|+.. +.++++.+++.|+++.
T Consensus 347 ~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 347 VGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred HHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 66778899999999886642 24689999975 8899999999998864
No 140
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.85 E-value=1.6e-19 Score=155.34 Aligned_cols=232 Identities=16% Similarity=0.109 Sum_probs=161.7
Q ss_pred CCccc-chhhhhhccCccc------ccccChhhhcccCC--CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeec
Q 024997 2 PFYPL-YQEQTDYFESVDY------KFEGEANLWGNASS--DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~-~~~~~~~~g~~~~------~~~~d~~~l~~~~~--~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De 67 (259)
|.|+. +...++..|.+.. ++.+|++++++.++ ++.+++++++++||||.+.+ ++|+++|+++|+|+
T Consensus 83 ~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~ 162 (355)
T TIGR03301 83 GAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDA 162 (355)
T ss_pred CchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEe
Confidence 34443 4556666776652 35778899998884 45677788999999999984 88999999999998
Q ss_pred cc-cCCCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhh-----------------hhhcCCCCH
Q 024997 68 AY-FWPHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYI-----------------SLNTMGVSR 128 (259)
Q Consensus 68 ~y-~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~ 128 (259)
++ |+.....+ ...+..++++|++|.+ |.+| +||++++ +++++.+.... ......++.
T Consensus 163 ~~s~g~~~~~~-~~~~~d~~~~s~~K~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 238 (355)
T TIGR03301 163 MSSFGAIPIDI-EELDVDALIASANKCLEGVPG--FGFVIAR-RDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPT 238 (355)
T ss_pred ccccCCcccch-hhcCccEEEecCCcccccCCc--eeEEEEC-HHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcH
Confidence 66 33211122 2345678899999986 5667 7999999 68888765210 011234666
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC---CCCCeeEEEecCC-
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR---PPSPAYAWVKCER- 204 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~- 204 (259)
..+.++.++++... .+..+.+..++++++++.+.+.|++++ +.... ..+++++|+.++.
T Consensus 239 ~~~~a~~~al~~~~---~~g~~~~~~~~~~~~~~~~~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T TIGR03301 239 HTVYAFAQALEELE---AEGGVPARIARYRRNRELLVDGLRALG--------------FQPLLPERWQSPIIVSFLYPDD 301 (355)
T ss_pred HHHHHHHHHHHHHH---HcccHHHHHHHHHHHHHHHHHHHHHcC--------------CeeecCCCCCCCcEEEEECCCC
Confidence 77777666666431 112356677888999999999998764 22111 2356677888764
Q ss_pred --CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 205 --EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 205 --~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.+.+.+.+.|.++||.+.+|..+. .+++||++.. ++++++.+++.|++++
T Consensus 302 ~~~~~~~~~~~l~~~gi~i~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 302 PDFDFDDFYQELKERGFVIYPGKLTL--ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CcchHHHHHHHHHHCCEEEECCcccc--ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 233456666778899999986554 2799999843 8999999999998764
No 141
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.9e-19 Score=156.88 Aligned_cols=207 Identities=9% Similarity=0.080 Sum_probs=140.9
Q ss_pred CCCccc----chhhhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPL----YQEQTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~----~~~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+. |.......|.++.... .|++.|++.++++++++++++||||||.+. .++|+++|+++|+|++|.
T Consensus 106 ~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a 185 (405)
T PRK08776 106 HDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFL 185 (405)
T ss_pred cCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCc
Confidence 366665 3333343454443333 467889988888899999999999999987 388999999999999994
Q ss_pred CCCC-CCCCCCCCCeEEEeccccccCC-CcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 WPHF-APIPAPADEELMIFTISKLTGH-AGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~~~~-~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.+.. .++ ..+..+++.|.||.++. .|+..|++++.++++.+++.........+++++.++++...++
T Consensus 186 ~~~~~~pl--~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~--------- 254 (405)
T PRK08776 186 SPALQKPL--EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR--------- 254 (405)
T ss_pred ccccCCcc--cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC---------
Confidence 2221 122 22346899999999964 4688999988667888888776666666678877776654444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
+++.++++.+++...+.+.|++.+.+.....|+...+ .++......|-.+.+.++. +.+.+.+++++-.+
T Consensus 255 tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~l 328 (405)
T PRK08776 255 TLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG-GEAAVRAFVDGLRY 328 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC-CHHHHHHHHHhCCc
Confidence 7788899999999999999999987654444432211 1222222234455666754 34445556655444
No 142
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.85 E-value=6.8e-20 Score=160.42 Aligned_cols=211 Identities=12% Similarity=0.061 Sum_probs=147.6
Q ss_pred cChhhhcccCC---C-CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc----cCCCCCCCC---C-CCCCeE
Q 024997 23 GEANLWGNASS---D-THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY----FWPHFAPIP---A-PADEEL 85 (259)
Q Consensus 23 ~d~~~l~~~~~---~-~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y----~~~~~~~~~---~-~~~~~i 85 (259)
.|.+.+++.++ + ++++|++++|+||+|.+.+ ++|+++|+++|+||+| |++....+. + ..+.++
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~di 240 (402)
T TIGR01821 161 NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDI 240 (402)
T ss_pred CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeE
Confidence 46666766663 3 5789999999999999983 8999999999999998 233222211 2 123478
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
+++||||.+|.+| ||++++ +++++.+...... .+.+.++..+.++.+.++.. ... .+.++++.+++++
T Consensus 241 v~~t~sKa~g~~G---G~i~~~-~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~-----~~~-~~~~~~~~~~~~~ 310 (402)
T TIGR01821 241 IEGTLAKAFGVVG---GYIAAS-RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL-----KES-QDLRRAHQENVKR 310 (402)
T ss_pred EEEechhhhccCC---ceeecC-HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh-----hcC-HHHHHHHHHHHHH
Confidence 8999999999888 999988 6999988765432 24457777888888888742 112 4456667788888
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEee
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLL 239 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~ 239 (259)
+.+.|++++ ++...+.++ ++.+.+... ..++...+++++||.+++...... +..++|+++.
T Consensus 311 l~~~L~~~g--------------~~~~~~~~~-i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~ 375 (402)
T TIGR01821 311 LKNLLEALG--------------IPVIPNPSH-IVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPT 375 (402)
T ss_pred HHHHHHHcC--------------CCcCCCCCC-EEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeC
Confidence 888888754 222344444 344445432 234555556677999988553322 3468999985
Q ss_pred --cChhhHHHHHHHHHHHhhh
Q 024997 240 --KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 240 --~~~~~~~~~~~~l~~~l~~ 258 (259)
.++++++++++.|++++++
T Consensus 376 ~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 376 PAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 3999999999999988753
No 143
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.85 E-value=1.8e-19 Score=155.26 Aligned_cols=232 Identities=13% Similarity=0.054 Sum_probs=154.5
Q ss_pred chhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCC
Q 024997 7 YQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPH 73 (259)
Q Consensus 7 ~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~ 73 (259)
+...++..|.++. .+.+|.+++++.+++ +++++++++|+||||.+++ ++|+++|+++++|++| ++..
T Consensus 89 ~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~ 168 (356)
T cd06451 89 WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGE 168 (356)
T ss_pred HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCc
Confidence 4556666776652 256788999999876 8999999999999999883 7899999999999987 3322
Q ss_pred CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHH---hhh----------------hhcCCCCHHHHHHH
Q 024997 74 FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA---YIS----------------LNTMGVSRECQLRA 134 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~---~~~----------------~~~~~~~~~~q~~~ 134 (259)
...+. ..+..+++.|.+|.++.+ .++||++.+ +++++.+.. ... .....++...+.++
T Consensus 169 ~~~~~-~~~~d~~~~s~~K~l~~p-~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~ 245 (356)
T cd06451 169 PFRMD-EWGVDVAYTGSQKALGAP-PGLGPIAFS-ERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYAL 245 (356)
T ss_pred ccccc-ccCccEEEecCchhccCC-CCcceeEEC-HHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHH
Confidence 22221 223457788999999743 358999998 688877653 000 11122334444555
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGI 213 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 213 (259)
.++++.. ....+++..++.+++.+.+.+.|+.++ +.+. ......++.++|+.++.. +...+.+.
T Consensus 246 ~aal~~l----~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T cd06451 246 REALDLI----LEEGLENRWARHRRLAKALREGLEALG-LKLL----------AKPELRSPTVTAVLVPEGVDGDEVVRR 310 (356)
T ss_pred HHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHcC-Ceec----------cCcccCCCceEEEECCCCCCHHHHHHH
Confidence 5555532 112345667778888888888888753 2211 000122455667766532 34445555
Q ss_pred HHHc-CeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 214 LKAA-KIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 214 l~~~-gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
|.++ ||.+++|..+. .++++|+|++. ++++++.+++.|+++++
T Consensus 311 L~~~~gI~~~~g~~~~-~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 311 LMKRYNIEIAGGLGPT-AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHhCCEEEecccccc-cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 5555 99999987543 34799999964 88999999999998764
No 144
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.85 E-value=6.7e-20 Score=160.51 Aligned_cols=230 Identities=15% Similarity=0.086 Sum_probs=154.2
Q ss_pred chhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCC-C
Q 024997 7 YQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPH-F 74 (259)
Q Consensus 7 ~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~-~ 74 (259)
|...++..|.++. .+.+|.+.|++.++++++++++++|+||||.+++ ++|+++|+++|+|++|.... .
T Consensus 125 ~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~ 204 (403)
T TIGR01979 125 WQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP 204 (403)
T ss_pred HHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc
Confidence 3344555666542 2457888999999889999999999999999983 78999999999999983111 1
Q ss_pred CCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh--------------------hhcC-CCCHHHHHH
Q 024997 75 APIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS--------------------LNTM-GVSRECQLR 133 (259)
Q Consensus 75 ~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~q~~ 133 (259)
..+ ...+.++++.|++|.+|.+| +|+++++ +++++.+..... .... .++.....+
T Consensus 205 ~~~-~~~~~d~~~~s~~K~~gp~G--~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 280 (403)
T TIGR01979 205 VDV-QALDCDFYVFSGHKMYGPTG--IGVLYGK-EELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIG 280 (403)
T ss_pred cCc-cccCCCEEEEecccccCCCC--ceEEEEc-hHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHH
Confidence 122 23356899999999998777 9999998 688776542210 0011 233344445
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC----CCeeEEEecCCCchHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP----SPAYAWVKCEREEDKD 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 209 (259)
+..+++...+ .-.++.+++..+.++.+.+.|+.++++. ...|. .+.++.+.++..+...
T Consensus 281 l~~al~~~~~----~g~~~~~~~~~~l~~~l~~~l~~~~g~~-------------~~~~~~~~~~~~~v~~~~~~~~~~~ 343 (403)
T TIGR01979 281 LGAAIDYLEA----IGLENIEAHEHELTAYALERLGEIPGLR-------------IYGPRDAEDRGGIISFNVEGVHPHD 343 (403)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHhcCCCEE-------------EeCCCCccccCceEEEEeCCcCHHH
Confidence 5555543211 1134557778888888888887765422 22221 2334445565444555
Q ss_pred HHHHHHHcCeeeecCCcccC-------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+.+.|+++||.+++|..+.. .++++|+|++. +.++++.+++.|+++++
T Consensus 344 ~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 344 VGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred HHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 66788889999998864321 25799999975 88999999999988765
No 145
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.85 E-value=4.6e-20 Score=161.28 Aligned_cols=207 Identities=13% Similarity=0.096 Sum_probs=150.5
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCC--CCC--CCCCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHF--API--PAPADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~--~~~--~~~~~~~i~~ 87 (259)
.|++.|++.+.+++++++++.++||+|.+++ ++|+++|+++|+||+| |+... ..+ .+..+. +
T Consensus 171 ~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD---i 247 (398)
T PRK03244 171 GDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD---V 247 (398)
T ss_pred CCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC---E
Confidence 3778888888778899899999999999883 7899999999999999 43211 111 122122 4
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
.||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.+.++... .+ ...++++++.+.+.+.
T Consensus 248 ~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~----~~~~~~~~~~~~l~~~ 318 (398)
T PRK03244 248 VTLAKGLG-GGLPIGACLAF-GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIA---SE----GLLENAERLGEQLRAG 318 (398)
T ss_pred EEEchhhh-CCcccEEEEEc-HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH---hc----cHHHHHHHHHHHHHHH
Confidence 58899998 89999999999 6898888765555678899999999999987531 11 2356677777888888
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhH
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDF 245 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~ 245 (259)
|+.++. . .+.... ..|.++|+.++......+.+.+.++||.+.+. ..+.+|+++.. +++++
T Consensus 319 L~~~~~---~--------~~~~v~-g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~-----~~~~iR~~p~~~~t~~~i 381 (398)
T PRK03244 319 IEALGH---P--------LVDHVR-GRGLLLGIVLTAPVAKAVEAAAREAGFLVNAV-----APDVIRLAPPLIITDAQV 381 (398)
T ss_pred HHhcCC---C--------ceeeEe-eccEEEEEEEeccHHHHHHHHHHHCCeEEeec-----CCCEEEEECCCcCCHHHH
Confidence 876430 0 011222 36788898885433344445555789999872 24789999753 89999
Q ss_pred HHHHHHHHHHhhh
Q 024997 246 DLLLHRLDELISK 258 (259)
Q Consensus 246 ~~~~~~l~~~l~~ 258 (259)
++++++|.+++.+
T Consensus 382 ~~~~~~l~~~l~~ 394 (398)
T PRK03244 382 DAFVAALPAILDA 394 (398)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 146
>PLN02721 threonine aldolase
Probab=99.85 E-value=1.4e-19 Score=155.69 Aligned_cols=227 Identities=13% Similarity=0.041 Sum_probs=144.8
Q ss_pred CCCcc-cchh--hhhhccCccc------ccccChhhhcccCC-------CCceEEEEcC-CCCCChhhH--------HHh
Q 024997 1 MPFYP-LYQE--QTDYFESVDY------KFEGEANLWGNASS-------DTHLVEFVTA-PNNPDGQMN--------KAV 55 (259)
Q Consensus 1 ~P~y~-~~~~--~~~~~g~~~~------~~~~d~~~l~~~~~-------~~~~~i~i~~-p~NPtG~~~--------~~l 55 (259)
+|+|. .|.. .+...|.++. .+.+|++.|++.++ ++++++++++ ||||||.++ .++
T Consensus 87 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l 166 (353)
T PLN02721 87 DNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGEL 166 (353)
T ss_pred CccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHH
Confidence 46653 3432 4555666542 24578899999886 5788888877 478999875 278
Q ss_pred hcCCCcEEEeeccc-cCC-CCCCCC--C-CCCCeEEEeccccccCCCcceEEE-EEecCHHHHHHHHHhhhhhcCCCCHH
Q 024997 56 LKGPYAKSIYDHAY-FWP-HFAPIP--A-PADEELMIFTISKLTGHAGSRFGW-AVIKDEAVYQRMSAYISLNTMGVSRE 129 (259)
Q Consensus 56 a~~~~~~vi~De~y-~~~-~~~~~~--~-~~~~~i~~~S~SK~~g~~G~R~G~-i~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (259)
|+++|+++|+|++| |+. ...... . ......++.|+||.++.+ +|+ ++.+ +++++.+.........+++.+
T Consensus 167 ~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T PLN02721 167 AKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAP---VGSVIVGS-KSFIRKAKRLRKTLGGGMRQV 242 (353)
T ss_pred HHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCc---eeeEEecC-HHHHHhHHHHHHhcCCCeehh
Confidence 99999999999998 321 111111 1 113345566899998743 576 5566 799888776655433333333
Q ss_pred HHHHH--HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---
Q 024997 130 CQLRA--FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--- 204 (259)
Q Consensus 130 ~q~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 204 (259)
.+.++ ...++ .+..+ .++..++++.+.+.|+.++++.. . ..+..+.++|++++.
T Consensus 243 ~~~~~~~~~~l~--------~~~~~-~~~~~~~~~~l~~~L~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~ 301 (353)
T PLN02721 243 GVLAAAALVALQ--------ENVPK-LEDDHKKAKLLAEGLNQIKGLRV-----------N-VAAVETNIVYFDITDGSR 301 (353)
T ss_pred HHHHHHHHHHHH--------HHHHH-HHHHHHHHHHHHHHHHhCCCcEE-----------e-cCCccceEEEEEccCCcc
Confidence 32322 22232 23333 33345667788888887654211 1 223335568888864
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.+.+.+.+.|.++||.++|+ +.+++|++++. +++++++++++|++++.
T Consensus 302 ~~~~~~~~~L~~~gi~v~~~-----~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 302 ITAEKLCKSLEEHGVLLMPG-----NSSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ccHHHHHHHHHhCCcEEecC-----CCceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 24455566666899999996 24789999963 99999999999998764
No 147
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.84 E-value=2.1e-19 Score=156.33 Aligned_cols=234 Identities=12% Similarity=0.133 Sum_probs=151.3
Q ss_pred hhhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCC
Q 024997 9 EQTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPAD 82 (259)
Q Consensus 9 ~~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~ 82 (259)
..+...|.++..+.. |++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+.. ..+...+
T Consensus 119 ~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~-~~pl~~g 197 (390)
T PRK08133 119 KIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL-QQPLKLG 197 (390)
T ss_pred HHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc-CCchhhC
Confidence 344556766654444 57889999988999999999999999987 3899999999999998821111 1111223
Q ss_pred CeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 83 EELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
..+++.|+||.++.+|.++ ||++++ +++++.+...........++..++.+.+.+ +.+..+.++..++.
T Consensus 198 ~Divv~S~sK~~~g~g~~~GG~vv~~-~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl---------~tl~~R~~~~~~~a 267 (390)
T PRK08133 198 ADVVIHSATKYLDGQGRVLGGAVVGS-KELMEEVFGFLRTAGPTLSPFNAWVFLKGL---------ETLSLRMEAHSANA 267 (390)
T ss_pred CcEEEeecceeecCCcceEeEEEEcC-HHHHHHHHHHHHHhCCCCCHHHHHHHHccc---------chHHHHHHHHHHHH
Confidence 4688999999998899998 566666 688888877666666666666554433222 36777788889999
Q ss_pred HHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc---------
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR--------- 228 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~--------- 228 (259)
..+.+.|++.+.+.....+..... .++......|..+.++++. +.+.+.+++++-.+.. .+.++|
T Consensus 268 ~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~f~~~l~l~~-~~~slG~~~sl~~~p 345 (390)
T PRK08133 268 LALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG-GREAAWRVIDATRLIS-ITANLGDTKTTITHP 345 (390)
T ss_pred HHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC-CHHHHHHHHHhCCcce-EeccCCCcceeeecC
Confidence 999999999887654444431111 0111112234455666653 3444555655544421 121111
Q ss_pred -----------------CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 -----------------AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 -----------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++.+|+|++- |+.+.+++-|.+.|+
T Consensus 346 ~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 389 (390)
T PRK08133 346 ATTTHGRLSPEARAAAGITEGLIRVAVGL--EDVADIKADLARGLA 389 (390)
T ss_pred CCCCcccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHhh
Confidence 125789999987 345556666655553
No 148
>PLN02242 methionine gamma-lyase
Probab=99.84 E-value=1.9e-19 Score=157.40 Aligned_cols=162 Identities=10% Similarity=0.024 Sum_probs=119.4
Q ss_pred CCCcccchhhh-----hhccCcccccc-cChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQT-----DYFESVDYKFE-GEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~-----~~~g~~~~~~~-~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|.|+.+...+ +..|.++..+. .|++++++++++ ++++|++++|+||||.+. .++|+++|++||+|++
T Consensus 122 ~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea 201 (418)
T PLN02242 122 NTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNT 201 (418)
T ss_pred CCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECC
Confidence 46777776554 23455543333 368889999987 599999999999999998 3889999999999999
Q ss_pred ccCCCCCCCCCCCCCeEEEeccccccCCCcce-EEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 69 YFWPHFAPIPAPADEELMIFTISKLTGHAGSR-FGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 69 y~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R-~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
| .+-.... ...+.+++++|+||.++.+|++ .||++++ +++++.+...... ...+.+...|.+...+..
T Consensus 202 ~-~~~~~~~-~~~g~divv~S~SK~l~g~g~~~gG~iv~~-~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~------ 272 (418)
T PLN02242 202 F-APMVLSP-ARLGADVVVHSISKFISGGADIIAGAVCGP-AELVNSMMDLHHGALMLLGPTMNPKVAFELSER------ 272 (418)
T ss_pred C-CccCCCH-HHcCCcEEEEeCccccCCCCCceEEEEEcC-HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC------
Confidence 9 2111111 1224679999999999888988 4999988 7999988876442 234555666666655543
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
...+..++++++++++.+.+.|++++
T Consensus 273 -l~tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 273 -LPHLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 23666788899999999999999985
No 149
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.84 E-value=2.5e-19 Score=156.65 Aligned_cols=223 Identities=16% Similarity=0.113 Sum_probs=144.5
Q ss_pred hhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCCC
Q 024997 9 EQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFAP 76 (259)
Q Consensus 9 ~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~~ 76 (259)
..++..|.++. .+.+|++.|++.++++++++++++|+||||.+++ ++|+++|+++|+|++++.+.. .
T Consensus 123 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-~ 201 (397)
T TIGR01976 123 QAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG-L 201 (397)
T ss_pred HHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc-C
Confidence 34455676542 2457788899999888999999999999999873 889999999999999852211 1
Q ss_pred CC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc---------CCCCH-HH---HHHHHHHHHHHH
Q 024997 77 IP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT---------MGVSR-EC---QLRAFKLLKVVL 142 (259)
Q Consensus 77 ~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~---------~~~~~-~~---q~~~~~~l~~~~ 142 (259)
+. ...+..++++|++|.+| .|+|+++++ +++++.+........ .+.++ .. ..++.+.+...
T Consensus 202 ~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~- 276 (397)
T TIGR01976 202 IDVQATGADFLTCSAYKFFG---PHMGILWGR-PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGL- 276 (397)
T ss_pred CCHHHcCCCEEEEechhhcC---CceEEEEEc-HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHh-
Confidence 11 22345777899999985 468999999 688887764322111 11122 22 22334444321
Q ss_pred hcCCc----------chHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC----CCCeeEEEecCCCchH
Q 024997 143 EDGGN----------NIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP----PSPAYAWVKCEREEDK 208 (259)
Q Consensus 143 ~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 208 (259)
+.+ ..+++..++..+..+++.+.|++++++. ...+ ..+.++.+.++..+.+
T Consensus 277 --g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T TIGR01976 277 --GESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVT-------------LYGVARLAARVPTVSFTVHGLPPQ 341 (397)
T ss_pred --CcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEE-------------EeCCCCccCCCceEEEEeCCcCHH
Confidence 110 0245556666777777778777655422 2221 1233555666544455
Q ss_pred HHHHHHHHcCeeeecCCccc----------CCCCeEEEEeec--ChhhHHHHHHHH
Q 024997 209 DCYGILKAAKIIGREGKKFR----------AEARFVRLSLLK--SQDDFDLLLHRL 252 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~----------~~~~~~Ris~~~--~~~~~~~~~~~l 252 (259)
.+.+.|+++||.++.|..+. ...+++|+|+.. +.++++.+++.|
T Consensus 342 ~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 342 RVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 56666778899999887664 134689999965 888898888754
No 150
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1.7e-19 Score=156.83 Aligned_cols=219 Identities=13% Similarity=0.073 Sum_probs=142.3
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCCC
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGHA 97 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 97 (259)
.|++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+ ....+-..+.++++.|+||.++.+
T Consensus 134 ~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~-~~~~pl~~g~Div~~S~sK~l~g~ 212 (386)
T PRK06767 134 ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSP-YLQRPLELGCDAVVHSATKYIGGH 212 (386)
T ss_pred CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccc-ccCCchhcCCcEEEecCcceecCC
Confidence 467888888888899999999999999987 38999999999999998211 111111224468899999999888
Q ss_pred cceE-EEEEecCHHHHHHHHH-hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 024997 98 GSRF-GWAVIKDEAVYQRMSA-YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFS 175 (259)
Q Consensus 98 G~R~-G~i~~~~~~~~~~~~~-~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 175 (259)
|.|+ ||++++ +++++++.. .........+++.++++...++ .+..+.++.+++...+.+.|++++++.
T Consensus 213 g~~~gG~v~~~-~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---------tl~~r~~~~~~~a~~la~~L~~~p~v~ 282 (386)
T PRK06767 213 GDVVAGVTICK-TRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---------TLAVRMDRHCDNAEKIVSFLKNHDAVE 282 (386)
T ss_pred CCceeEEEEeC-hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---------cHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 9886 899988 587777543 3333444556665555443333 455678889999999999999998876
Q ss_pred cccccccccccceee-CCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCccc----------------------CC
Q 024997 176 LQEIAPQYCTYFKKI-RPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFR----------------------AE 230 (259)
Q Consensus 176 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~----------------------~~ 230 (259)
....|.+ ..++.. ...+| .+.+.++.. +...+.+.|+..++.+.-|.... .+
T Consensus 283 ~v~~p~~--~~~~~~~~~~gg-~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~ 359 (386)
T PRK06767 283 GVWYPEG--ELASRQMKRGGG-VISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIY 359 (386)
T ss_pred EEECCCc--HHHHHhCCCCCc-eEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCC
Confidence 5444421 111111 22334 444455432 23445555555666655552111 12
Q ss_pred CCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 231 ARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 231 ~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
++.+|+|++- |+.+++++-|.+.|+
T Consensus 360 ~~l~R~svGl--E~~~dl~~dl~~al~ 384 (386)
T PRK06767 360 DNLIRLSVGL--ESWEDIVSDLEQALK 384 (386)
T ss_pred CCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 5689999987 334555555555543
No 151
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=4.2e-19 Score=153.96 Aligned_cols=186 Identities=12% Similarity=0.104 Sum_probs=133.2
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccC-C
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTG-H 96 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g-~ 96 (259)
.|++++++.+++++++|++++|+||||.++ .++|+++|+++|+|++|..+.. ..+-.....++++|+||.++ .
T Consensus 125 ~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~-~~pl~~gaDivv~S~tK~l~G~ 203 (386)
T PRK08045 125 GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-QNPLALGADLVLHSCTKYLNGH 203 (386)
T ss_pred CCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-CCchhhCCCEEEeecceeccCC
Confidence 577889988888999999999999999998 3889999999999999942211 11112233689999999984 6
Q ss_pred CcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 97 AGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 97 ~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
+|++.|++++.++++++.+.......+.+.+++.++.+.+.++ .+..++++..++...+.+.|+..+.+..
T Consensus 204 ~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~---------tl~~R~~~~~~na~~la~~L~~~p~v~~ 274 (386)
T PRK08045 204 SDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---------TLVPRMELAQRNAQAIVKYLQTQPLVKK 274 (386)
T ss_pred CCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhc---------cHHHHHHHHHHHHHHHHHHHHcCCCEeE
Confidence 7899999988557898888877777788899999988877776 4777899999999999999999987654
Q ss_pred ccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 177 QEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 177 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
...|....+ .++......|-.+.+.++. +.+.+.++++.-.+
T Consensus 275 V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~ 320 (386)
T PRK08045 275 LYHPSLPENQGHEIAARQQKGFGAMLSFELDG-DEQTLRRFLGGLSL 320 (386)
T ss_pred EECCCCCCCcCHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhccc
Confidence 433332111 0111111223345566653 33444455544443
No 152
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.84 E-value=1.6e-19 Score=156.82 Aligned_cols=204 Identities=14% Similarity=0.125 Sum_probs=147.5
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEe
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~ 88 (259)
|++.|++.+.++++++++..+++++|.+. .++|+++|+++|+||+| |+.....+. +..+ . +.
T Consensus 156 d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~-d--i~ 232 (377)
T PRK02936 156 DIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDP-D--IV 232 (377)
T ss_pred CHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCC-c--EE
Confidence 67889988888889988888888888764 28899999999999999 322111111 1111 1 44
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
|+||.++ +|+|+||++++ +++.+.+.......+.+.+++.|.++.++++... .+ +.+++++++.+.+.+.|
T Consensus 233 t~sK~l~-~G~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~----~~~~~~~~~~~~l~~~L 303 (377)
T PRK02936 233 TVAKGLG-NGIPVGAMIGK-KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK---QP----SFLEEVQEKGEYFLQKL 303 (377)
T ss_pred EEccccc-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH---hc----cHHHHHHHHHHHHHHHH
Confidence 8999999 99999999999 7999988765555567889999999999998531 12 23566677777777777
Q ss_pred Hhc-CCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhH
Q 024997 169 SLS-NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDF 245 (259)
Q Consensus 169 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~ 245 (259)
++. .++. .+....+ .|+++|+++... .+.+...+.++||.+.|+ +.+++||++ ..+++++
T Consensus 304 ~~~~~~~~----------~~~~v~~-~g~~~~i~~~~~-~~~~~~~l~~~gv~v~~~-----g~~~lRi~p~~~~~~~~i 366 (377)
T PRK02936 304 QEELEHLE----------CVKNIRG-KGLMIGIECTEE-VAPVIEQLREEGLLVLSA-----GPNVIRLLPPLVVTKEEL 366 (377)
T ss_pred HHHHhhCC----------cEEeEee-cceEEEEEecch-HHHHHHHHHHCCeEEecC-----CCCEEEEECCcccCHHHH
Confidence 652 1110 0222223 568899998654 455666777899999873 347999996 4599999
Q ss_pred HHHHHHHHHHh
Q 024997 246 DLLLHRLDELI 256 (259)
Q Consensus 246 ~~~~~~l~~~l 256 (259)
++++++|.+++
T Consensus 367 ~~~i~~l~~~~ 377 (377)
T PRK02936 367 DQAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHHhC
Confidence 99999998764
No 153
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.83 E-value=4.1e-19 Score=154.95 Aligned_cols=168 Identities=11% Similarity=0.128 Sum_probs=119.1
Q ss_pred CCcccchhh----hhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCC--CcEEEeeccc
Q 024997 2 PFYPLYQEQ----TDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGP--YAKSIYDHAY 69 (259)
Q Consensus 2 P~y~~~~~~----~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~--~~~vi~De~y 69 (259)
|.|+.+... ++..|.++..+. .|++++++.+++++++|++++|+||||.+. .++|+++ |+++|+|++|
T Consensus 111 ~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~ 190 (400)
T PRK06234 111 TLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTF 190 (400)
T ss_pred CccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 556554433 344566654333 367889998988999999999999999997 3888886 9999999998
Q ss_pred cCCCCCCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHh--hhhhcCCCCHHHHHHHHHHHHHHHhcCC
Q 024997 70 FWPHFAPIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAY--ISLNTMGVSRECQLRAFKLLKVVLEDGG 146 (259)
Q Consensus 70 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 146 (259)
-.+.. ..+...+.+++++|+||.++.+|+|+ ||++++ +++++.++.. ....+.+.++...+.+...++
T Consensus 191 ~~~~~-~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~------- 261 (400)
T PRK06234 191 CTPYI-QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMK------- 261 (400)
T ss_pred Cchhc-CCchhhCCcEEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-------
Confidence 21111 11112246799999999998889876 999998 6888887653 223345666665554444443
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 147 NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
.+..++++.+++...+.+.|++.+.+.....+
T Consensus 262 --tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p 293 (400)
T PRK06234 262 --TLQIRMEKHCKNAMKVAKFLESHPAVEKVYYP 293 (400)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 45667888889999999999988866544444
No 154
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.83 E-value=1.3e-19 Score=157.70 Aligned_cols=216 Identities=14% Similarity=0.146 Sum_probs=149.6
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCCCCC-CCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~ 94 (259)
+.+|++.|++.++++++++++++||||||.+++ ++|+++|+++++|+++..+. .++. ...+..+++.|++|.+
T Consensus 126 g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~-~~~~~~~~~~D~~~~s~~K~~ 204 (382)
T TIGR03403 126 GTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK-IPVDVQKAGVDFLSFSAHKFH 204 (382)
T ss_pred CCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCC-CccCccccCCCEEEEcchhhC
Confidence 356788899999888999999999999999983 88999999999999973111 1122 2334578999999998
Q ss_pred CCCcceEEEEEecCHHHH--HHHHH---hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVY--QRMSA---YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~--~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
|.+| +|++++.+ +.. ..+.. ........++.+.+.++..+++. ..+.++...+++++.++++.+.|+
T Consensus 205 gp~G--~g~l~vr~-~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~-----~~~~~~~~~~~~~~l~~~l~~~L~ 276 (382)
T TIGR03403 205 GPKG--VGGLYIRK-GVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL-----ANEYLDFEKSHVRRLRDRLEDALL 276 (382)
T ss_pred CCCc--eEEEEECC-CCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHHh
Confidence 8888 68887663 321 11100 00011234566667667777763 223466777889999999999998
Q ss_pred hcCCCccccccccccccceeeCC---CCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC-----------------
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRP---PSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA----------------- 229 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~----------------- 229 (259)
+++++. ...+ ..+.++.+.++..+.+.+...|.++||.++.|..+..
T Consensus 277 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~ 343 (382)
T TIGR03403 277 ELPDVF-------------VVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKE 343 (382)
T ss_pred cCCCEE-------------EECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChH
Confidence 766532 2222 2234555666655555555567789999998876531
Q ss_pred -CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 230 -EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 -~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
..+.+|+|+.. +.++++.+++.|++++++
T Consensus 344 ~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 344 LAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred HhCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12579999976 889999999999887753
No 155
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=4.2e-19 Score=153.81 Aligned_cols=221 Identities=13% Similarity=0.113 Sum_probs=148.1
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCC-CCCCCCCCCCeEEEeccccccC-
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPH-FAPIPAPADEELMIFTISKLTG- 95 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~-~~~~~~~~~~~i~~~S~SK~~g- 95 (259)
.|++.+++.+++++++|++++||||||.+++ ++|+++|+++|+|++|..+. ..++ ....+++++|+||.++
T Consensus 124 ~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl--~~gaDivv~S~sK~l~G 201 (382)
T TIGR02080 124 GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL--ALGADLVLHSCTKYLNG 201 (382)
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch--hhCCCEEEeecceeccC
Confidence 4678899999888999999999999999983 88999999999999993111 1111 1123689999999985
Q ss_pred CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 024997 96 HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFS 175 (259)
Q Consensus 96 ~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 175 (259)
.+|++.|++++.++++++.+.......+.+.+++..+.+.+.++ .+..++++..++...+.+.|++.+.+.
T Consensus 202 ~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~---------tl~~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 202 HSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR---------TLVARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred CCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc---------hHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 68999999988657899999888777778888887776644443 566668889999999999999988765
Q ss_pred cccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe---eeecCCc----------------------
Q 024997 176 LQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI---IGREGKK---------------------- 226 (259)
Q Consensus 176 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~~~~g~~---------------------- 226 (259)
....|..... .++......|-.+.++++. +.+.+.++++.-.+ .+.-|..
T Consensus 273 ~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~ 351 (382)
T TIGR02080 273 KIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG-GEQTVRRFLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAE 351 (382)
T ss_pred EEECCCCCCCccHHHHHhhCCCCCceEEEEecC-cHHHHHHHHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHh
Confidence 4444432111 1111112234455666753 23444445444333 2222210
Q ss_pred ccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 227 FRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 227 f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+..++.+|||++- |+.+++++-|.+.|+
T Consensus 352 ~gi~~~liRlsvGl--E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 352 AGISDTLLRLSVGL--EDADDLIADLEQGLR 380 (382)
T ss_pred cCCCcCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 11125689999987 344455555555554
No 156
>PRK07505 hypothetical protein; Provisional
Probab=99.83 E-value=4.7e-19 Score=155.08 Aligned_cols=211 Identities=9% Similarity=0.035 Sum_probs=137.8
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc----cCCCCCC-----CCC-CCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY----FWPHFAP-----IPA-PADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y----~~~~~~~-----~~~-~~~~~i~~ 87 (259)
.|++.|++.+.++++++++++|+||||.+++ ++|+++|+++|+||+| |++.... +.. ..++++++
T Consensus 167 ~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~ 246 (402)
T PRK07505 167 NDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIA 246 (402)
T ss_pred CCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEE
Confidence 5778888888767788899999999999873 8999999999999998 2222111 112 46779999
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcC--CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM--GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
+|+||.+|.+| ||++++++++++.+.......++ +++++...++.+.++.. .++.+.+..+.++++...+.
T Consensus 247 ~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~----~~~~~~~~~~~l~~~~~~~~ 319 (402)
T PRK07505 247 ASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIH----LSEELDQLQQKLQNNIALFD 319 (402)
T ss_pred EechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH----hccCcHHHHHHHHHHHHHHH
Confidence 99999999777 88876447898888776554433 34456666666666532 22344444555555555443
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeec--
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLK-- 240 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~-- 240 (259)
..+... ....+.+..++.+... ....+.+.|.++||.++++..+.. +.+++|+++..
T Consensus 320 ~~~~~~------------------~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~ 381 (402)
T PRK07505 320 SLIPTE------------------QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASH 381 (402)
T ss_pred HHHHhc------------------CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccC
Confidence 332110 0111111223333321 233344445578999998743322 24689999973
Q ss_pred ChhhHHHHHHHHHHHhhh
Q 024997 241 SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~ 258 (259)
+++++++++++|++++++
T Consensus 382 t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 382 TNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 157
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.83 E-value=1.1e-19 Score=158.62 Aligned_cols=237 Identities=14% Similarity=0.140 Sum_probs=163.2
Q ss_pred CCCcccchhhhhhccCccc--------------ccc--cChhhhcccCCCC----ceEEEEcCCCCCC-hhhH-------
Q 024997 1 MPFYPLYQEQTDYFESVDY--------------KFE--GEANLWGNASSDT----HLVEFVTAPNNPD-GQMN------- 52 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------------~~~--~d~~~l~~~~~~~----~~~i~i~~p~NPt-G~~~------- 52 (259)
+|+|+.|.......|..+. +|. +|++.|++.++++ +++|++++||||+ |..+
T Consensus 98 ~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~ 177 (431)
T cd00617 98 NMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLRE 177 (431)
T ss_pred CCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHH
Confidence 5889999988888887651 244 8999999999654 7889999999999 7775
Q ss_pred -HHhhcCCCcEEEeecccc-CCC-C-----CCCC--CCCCCeEEEeccccccCCCcce------EEEEEecCHHHHHHHH
Q 024997 53 -KAVLKGPYAKSIYDHAYF-WPH-F-----APIP--APADEELMIFTISKLTGHAGSR------FGWAVIKDEAVYQRMS 116 (259)
Q Consensus 53 -~~la~~~~~~vi~De~y~-~~~-~-----~~~~--~~~~~~i~~~S~SK~~g~~G~R------~G~i~~~~~~~~~~~~ 116 (259)
.++|+++|++||+|++.+ +.. + .... ...+.++.++|+||.+.++|+| .||++++++++.++++
T Consensus 178 i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 178 VRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEAR 257 (431)
T ss_pred HHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHH
Confidence 389999999999999852 111 0 0111 1123345678899999888888 5699998767999887
Q ss_pred Hhhh----hhcCC-CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC
Q 024997 117 AYIS----LNTMG-VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR 191 (259)
Q Consensus 117 ~~~~----~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 191 (259)
.... ..+.+ .+.-...+++..|+. ..+ .+. .+...++++.+.+.|++.+ +.+..
T Consensus 258 ~~~~~~~~~~~~gG~~~r~~~A~A~gL~e-----~~~-~~~-l~~~~~~r~~l~~~L~~~G--------------~~v~~ 316 (431)
T cd00617 258 QRVVLYEGFVTYGGMAGRDMEALAQGLRE-----AVE-EDY-LRHRVEQVRYLGDRLDEAG--------------VPIVE 316 (431)
T ss_pred HhccccCCccccccccHHHHHHHHHHHHh-----ccc-HHH-HHHHHHHHHHHHHHHHHCC--------------CCccC
Confidence 5431 11122 233333333335552 111 222 3333345588888888765 66678
Q ss_pred CCCCeeEEEecCCC----------chHHHHHHHHHcCeeeec-CCc-cc--C--------CCCeEEEEeec---ChhhHH
Q 024997 192 PPSPAYAWVKCERE----------EDKDCYGILKAAKIIGRE-GKK-FR--A--------EARFVRLSLLK---SQDDFD 246 (259)
Q Consensus 192 ~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~~~~-g~~-f~--~--------~~~~~Ris~~~---~~~~~~ 246 (259)
|.+|+++|++.+.. +.+++..++++.||.+.- |+. ++ + +...+||++-+ +.++++
T Consensus 317 P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~ 396 (431)
T cd00617 317 PAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMD 396 (431)
T ss_pred CCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHH
Confidence 99999999998741 457788999999998654 441 11 1 24679999954 889999
Q ss_pred HHHHHHHHHhhh
Q 024997 247 LLLHRLDELISK 258 (259)
Q Consensus 247 ~~~~~l~~~l~~ 258 (259)
...+.+.+++++
T Consensus 397 ~~~~~~~~~~~~ 408 (431)
T cd00617 397 YVAAAVIALYER 408 (431)
T ss_pred HHHHHHHHHHhh
Confidence 999999888763
No 158
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.83 E-value=3e-19 Score=157.44 Aligned_cols=237 Identities=14% Similarity=0.086 Sum_probs=155.7
Q ss_pred cchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCC-
Q 024997 6 LYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPH- 73 (259)
Q Consensus 6 ~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~- 73 (259)
.|...++..|.++. ...+|++.|++.++++++++++++|+||||.+++ ++|+++|+++++|++|..+.
T Consensus 138 ~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~ 217 (424)
T PLN02855 138 PWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM 217 (424)
T ss_pred HHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc
Confidence 35555566676642 2346788899999889999999999999999983 88999999999999994221
Q ss_pred CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh--------------------hhhcCCCCHHHHH-
Q 024997 74 FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI--------------------SLNTMGVSRECQL- 132 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~q~- 132 (259)
...+ ...+.+++++|++|.+|.+| +||++++ +++++.+.... .....+.+.+.+.
T Consensus 218 ~~~~-~~~~~d~~~~s~~K~~gp~G--~G~l~~~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~ 293 (424)
T PLN02855 218 PVDV-QTLGADFLVASSHKMCGPTG--IGFLWGK-SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAI 293 (424)
T ss_pred CCCc-hhcCCCEEEeecccccCCCc--cEEEEEc-hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHH
Confidence 1122 23345788999999888777 8999999 58877664321 0012233343333
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYG 212 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (259)
++..+++.. .+.-+++..++..+..+.+.+.|++++++.+.. +. .......+.++.+.++..+.+.+.+
T Consensus 294 ~l~~al~~~----~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~--~~-----~~~~~~r~~~v~~~~~~~~~~~v~~ 362 (424)
T PLN02855 294 GLGAAIDYL----SEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYG--PK-----PSEGVGRAALCAFNVEGIHPTDLST 362 (424)
T ss_pred HHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC--CC-----cccccCcccEEEEEECCcCHHHHHH
Confidence 333444422 111345667778888888888888765432210 00 0000112345556666544555666
Q ss_pred HHHHc-CeeeecCCcccC-------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 213 ILKAA-KIIGREGKKFRA-------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~-gi~~~~g~~f~~-------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.|.++ ||.++.|..+.. -.+++|+|+.. +.++++.+++.|+++++
T Consensus 363 ~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~ 417 (424)
T PLN02855 363 FLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIA 417 (424)
T ss_pred HhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 66555 999998875531 14689999975 88999999999998875
No 159
>PRK07179 hypothetical protein; Provisional
Probab=99.83 E-value=6.3e-19 Score=154.56 Aligned_cols=220 Identities=11% Similarity=0.061 Sum_probs=146.3
Q ss_pred hhhhccCccccc-ccChhhhcccCCC-CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-c---CCCCCCCC
Q 024997 10 QTDYFESVDYKF-EGEANLWGNASSD-THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-F---WPHFAPIP 78 (259)
Q Consensus 10 ~~~~~g~~~~~~-~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~---~~~~~~~~ 78 (259)
.++..|.+...+ ..|++.|++.+++ ++++|++++|+||||.+++ ++|+++|+++|+||+| + +.....+.
T Consensus 154 ~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~ 233 (407)
T PRK07179 154 GVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLV 233 (407)
T ss_pred HHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchH
Confidence 334455555444 3588889988865 5788899999999999984 8999999999999999 3 22221111
Q ss_pred ---CCC-CCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh-cCCCCHHHHH-HHHHHHHHHHhcCCcchHHH
Q 024997 79 ---APA-DEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-TMGVSRECQL-RAFKLLKVVLEDGGNNIFEF 152 (259)
Q Consensus 79 ---~~~-~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~ 152 (259)
+.. ..++++.|+||.+|. |+||++++ +++++.+....... ..+...+.+. ++.+.++.. ....+
T Consensus 234 ~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~-~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~------~~~~~ 303 (407)
T PRK07179 234 AELGLTSRVHFITASLAKAFAG---RAGIITCP-RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI------ESADD 303 (407)
T ss_pred HhcCCCCCCCEEEeechHhhhc---cCeEEEeC-HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH------hcCHH
Confidence 222 236889999999962 68999998 68888776543321 1222223333 333445432 12245
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCccc-C-
Q 024997 153 GYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFR-A- 229 (259)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~-~- 229 (259)
.+++++++++.+.+.|++++ +... . .+.++++.+... +.+.+.+.|.++||.+.. |. +
T Consensus 304 ~~~~l~~~~~~l~~~L~~~g--------------~~v~-~-~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~---~~~p~ 364 (407)
T PRK07179 304 RRARLHANARFLREGLSELG--------------YNIR-S-ESQIIALETGSERNTEVLRDALEERNVFGAV---FCAPA 364 (407)
T ss_pred HHHHHHHHHHHHHHHHHHcC--------------CCCC-C-CCCEEEEEeCCHHHHHHHHHHHHHCCceEee---ecCCC
Confidence 67889999999999998763 2111 2 234566665432 345566677788997432 22 1
Q ss_pred ---CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 230 ---EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ---~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+++.+||+++. ++++++++++.|++++++
T Consensus 365 ~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 365 TPKNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 25799999975 999999999999988764
No 160
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.83 E-value=1.7e-18 Score=149.42 Aligned_cols=240 Identities=13% Similarity=0.067 Sum_probs=155.1
Q ss_pred CCCcccchhhhh----hccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccC
Q 024997 1 MPFYPLYQEQTD----YFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 1 ~P~y~~~~~~~~----~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~ 71 (259)
+|+|..+...+. ..|.++..+..+.+ .+ .+.++++++++++|+||||.+. .++|+++|+++|+|++|..
T Consensus 96 ~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~-~~-~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~ 173 (366)
T PRK07582 96 ADGYYQVRALAREYLAPLGVTVREAPTAGM-AE-AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTAT 173 (366)
T ss_pred CCCcHhHHHHHHHHHhcCeEEEEEECCCCh-HH-HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCC
Confidence 477877766543 24665544443322 11 3346789999999999999776 3889999999999999831
Q ss_pred CCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchH
Q 024997 72 PHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIF 150 (259)
Q Consensus 72 ~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 150 (259)
+ ....+-.....++++|+||.+ |.+|+|+||+++.++++++.+..........++++..+.+...++ .+
T Consensus 174 ~-~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~---------tl 243 (366)
T PRK07582 174 P-LGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLG---------TL 243 (366)
T ss_pred c-cccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc---------cH
Confidence 1 111111123468899999998 568899999998657899989888777777778887776655555 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccc-ccc---ceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCc
Q 024997 151 EFGYNTMKKRWENLSKIISLSNRFSLQEIAPQY-CTY---FKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~ 226 (259)
..+.++.+++...+.+.|++.+.+.....|... ... ++......|-.+.+.++ +.+.+.+++++.++... +.+
T Consensus 244 ~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~~~~~~~~~~~l~~~~~-~~s 320 (366)
T PRK07582 244 GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--DAAAAERFVAASRLVVA-ATS 320 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--CHHHHHHHHHhCCccee-ccc
Confidence 667788999999999999999876544433311 000 11111112334455565 46667788887777543 222
Q ss_pred cc---------------CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 227 FR---------------AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 227 f~---------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
++ .+++.+|+|++- |+.++.++.|.+.|+
T Consensus 321 ~G~~~sl~~~~~~~~~~~~~~liR~svGl--E~~~dli~dl~~al~ 364 (366)
T PRK07582 321 FGGVHTSADRRARWGDAVPEGFVRLSCGI--EDTDDLVADLERALD 364 (366)
T ss_pred CCCccchhhhHHHcCCCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 22 124689999987 233444444444443
No 161
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=4.6e-19 Score=154.48 Aligned_cols=206 Identities=13% Similarity=0.154 Sum_probs=134.3
Q ss_pred CCcccchhhhh----hccCccccc-ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccC
Q 024997 2 PFYPLYQEQTD----YFESVDYKF-EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 2 P~y~~~~~~~~----~~g~~~~~~-~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~ 71 (259)
|.|+.+...++ ..|.++..+ ..|++.+++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.
T Consensus 112 ~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~ 191 (398)
T PRK07504 112 ALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT 191 (398)
T ss_pred CchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc
Confidence 55665544332 335444222 4778899999989999999999999999998 3889999999999999821
Q ss_pred CCCCCCCCCCCCeEEEeccccccCCCcceEE-EEEecCHHHHH-HHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 72 PHFAPIPAPADEELMIFTISKLTGHAGSRFG-WAVIKDEAVYQ-RMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 72 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G-~i~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
+.. ..+...+.++++.|+||.++.+|+|+| +++.+ ++.++ .++.........++++..+.+.+.++ .
T Consensus 192 ~~~-~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~-~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~---------t 260 (398)
T PRK07504 192 PLF-QKPLELGAHIVVYSATKHIDGQGRCLGGVVLSD-KAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLE---------T 260 (398)
T ss_pred ccc-CCchhhCCCEEEeeccccccCCccceEEEEEeC-cHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc---------h
Confidence 111 111122468899999999988999996 56666 46554 45555555556677766665555444 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc----ceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY----FKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
+..+.++..++...+.+.|++.+.+.....|...... ++......|..+.++++. +.+...++++.-.+
T Consensus 261 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~~~~~l~~ 333 (398)
T PRK07504 261 LPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG-GKEAAFRFLNALKI 333 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC-CHHHHHHHHHhCCc
Confidence 6667888889999999999998876544444321111 111112234455666754 34445555554444
No 162
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=6.5e-19 Score=153.38 Aligned_cols=205 Identities=11% Similarity=0.058 Sum_probs=137.8
Q ss_pred CCcccchhh----hhhccCccccc-ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccC
Q 024997 2 PFYPLYQEQ----TDYFESVDYKF-EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 2 P~y~~~~~~----~~~~g~~~~~~-~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~ 71 (259)
|+|+..... +...|.++..+ ..|++.+++.+++++++|++++|+||||.++ .++|+++|+++|+|++|-.
T Consensus 111 ~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~ 190 (398)
T PRK08249 111 DTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFAT 190 (398)
T ss_pred CchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCc
Confidence 566654333 33456554322 3578889999988999999999999999998 3889999999999999821
Q ss_pred CC-CCCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 72 PH-FAPIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 72 ~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
+. ..++ .....++++|+||.++.+|.++ |+++++ +++++.++........+.+++.++.+.+.++ .
T Consensus 191 ~~~~~~l--~~~~Divv~S~sK~l~g~~~~~gG~vv~~-~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~---------t 258 (398)
T PRK08249 191 PINQNPL--ALGADLVIHSATKFLSGHADALGGVVCGS-KELMEQVYHYREINGATMDPMSAYLILRGMK---------T 258 (398)
T ss_pred cccCCch--hhCCCEEeccCceecCCCCCceEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc---------h
Confidence 11 1111 1234588899999998777776 666666 7999999888776777788887776655554 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
+..+.++..++...+.+.|++.+.+.....|..... .++......|-.+.+.++. +.+.+.++++.-.+
T Consensus 259 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~-~~~~~~~f~~~l~l 331 (398)
T PRK08249 259 LKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG-GMDTVKRLLPKLRY 331 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC-CHHHHHHHHHhCCc
Confidence 566778889999999999999887654444432111 0111111223344555543 34445556554444
No 163
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.83 E-value=8.6e-19 Score=153.64 Aligned_cols=210 Identities=14% Similarity=0.093 Sum_probs=145.4
Q ss_pred cChhhhcccCC----CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc----cCCCCCCC---CCC-CCCeE
Q 024997 23 GEANLWGNASS----DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY----FWPHFAPI---PAP-ADEEL 85 (259)
Q Consensus 23 ~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y----~~~~~~~~---~~~-~~~~i 85 (259)
.|++.+++.+. ++++++++++++||+|.+.+ ++|+++|+++|+||+| |++....+ .+. .+.++
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i 240 (406)
T PRK13393 161 NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTI 240 (406)
T ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeE
Confidence 46666766552 36788899999999999983 8999999999999998 23332221 122 22468
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
+++||||.+|.+| ||++++ +++++.+...... .+.+.++..+.++.+.++.. +.. ...+++++++.++
T Consensus 241 ~~~tlsKa~g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~-----~~~-~~~~~~~~~~~~~ 310 (406)
T PRK13393 241 IEGTLAKAFGVMG---GYITGS-AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHL-----KAS-SAERERHQDRVAR 310 (406)
T ss_pred EEEeCchhhcccC---ceeeCC-HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHH-----hhC-HHHHHHHHHHHHH
Confidence 8899999999888 999988 7999988776543 24556777788888888742 112 1234667888888
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEee
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLL 239 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~ 239 (259)
+.+.|++++ +...++.+.++ .+.+... ..++...+++++||.++++..... +.+.+|+++.
T Consensus 311 l~~~L~~~g--------------~~~~~~~~~i~-~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~ 375 (406)
T PRK13393 311 LRARLDKAG--------------IPHLPNPSHIV-PVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPS 375 (406)
T ss_pred HHHHHHHcC--------------CCcCCCCCCeE-EEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEEC
Confidence 999888653 22234444443 3334321 234455556557999998653332 3478999985
Q ss_pred --cChhhHHHHHHHHHHHhh
Q 024997 240 --KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 --~~~~~~~~~~~~l~~~l~ 257 (259)
.++++++++++.|++++.
T Consensus 376 ~~~t~edid~l~~~l~~~~~ 395 (406)
T PRK13393 376 PLHTDADIEHLVQALSEIWA 395 (406)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 399999999999998765
No 164
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.83 E-value=1.1e-18 Score=152.16 Aligned_cols=241 Identities=13% Similarity=0.144 Sum_probs=156.5
Q ss_pred CCcccchhhhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCC
Q 024997 2 PFYPLYQEQTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFA 75 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~ 75 (259)
|+|..+...++..|.++..+. .|++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+..
T Consensus 121 ~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~- 199 (403)
T PRK07810 121 SCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLL- 199 (403)
T ss_pred hHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcccc-
Confidence 345555556666677664333 467889999988999999999999999887 3889999999999999821111
Q ss_pred CCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHH-HHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHH
Q 024997 76 PIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQ-RMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFG 153 (259)
Q Consensus 76 ~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 153 (259)
.-+...+.++++.|+||.++.+|.++ |+++++ ++.+. .++.+......+++++.++.+.+.++ .+..+
T Consensus 200 ~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~-~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~---------tl~~R 269 (403)
T PRK07810 200 QRGLPLGADVVVYSGTKHIDGQGRVLGGAILGD-REYIDGPVQKLMRHTGPALSAFNAWVLLKGLE---------TLALR 269 (403)
T ss_pred CChhhcCCcEEEccCCceecCCcCceeEEEEeC-hHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC---------cHHHH
Confidence 11112245899999999998789888 788877 46554 46655555667788888887666665 56778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCee------
Q 024997 154 YNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKII------ 220 (259)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~------ 220 (259)
.++..++...+.+.|++.+.+.....|..... .++......|-.+.+.++.. +.+.+.++++.-.+.
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~sl 349 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNL 349 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccC
Confidence 88999999999999999887654444431111 01111123344556666542 244455666533331
Q ss_pred -------eecCC----ccc--------CCCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 221 -------GREGK----KFR--------AEARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 221 -------~~~g~----~f~--------~~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
..|+. .+. .+++.+|+|++- |+.+++++-|.+.
T Consensus 350 G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl--E~~~dli~dl~~A 401 (403)
T PRK07810 350 GDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL--EDTDDLIADLDRA 401 (403)
T ss_pred CCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHh
Confidence 22321 111 135689999987 3445555555544
No 165
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.82 E-value=6.5e-19 Score=152.87 Aligned_cols=206 Identities=13% Similarity=0.076 Sum_probs=147.2
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCC--CCCC--CCCCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPH--FAPI--PAPADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~--~~~~--~~~~~~~i~~ 87 (259)
.|.+.+++.+++++.++++.+++|++|.+. .++|+++|+++|+||+| |+.. .... .+..+. +
T Consensus 153 ~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i 229 (375)
T PRK04260 153 NDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---I 229 (375)
T ss_pred CCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---E
Confidence 377888888877788989999999999875 28899999999999999 4221 1111 122222 4
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
.||||.++ +|+|+||++++ +++.+.+.......+.+.+++.|.++.++++.. ..+++.++.++..+..++.+.+.
T Consensus 230 ~t~sK~l~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~---~~~~~~~~~~~~~~~~~~~l~~~ 304 (375)
T PRK04260 230 FTLAKGLA-NGVPVGAMLAK-SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIM---LTAGFLEQALENGNYLQEQLQKA 304 (375)
T ss_pred EEeccccc-CCcceEEEEEc-HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHH
Confidence 59999998 89999999999 699888865445566788999999999999764 12345555555555555555555
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEe-ec-ChhhH
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSL-LK-SQDDF 245 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~-~~~~~ 245 (259)
+...+. +..+. ..|+++|+.+... ...+.+.+.++||.+.|. +.+.+|+++ .. +++++
T Consensus 305 ~~~~~~-------------~~~~~-~~g~~~~~~~~~~-~~~~~~~l~~~Gi~v~~~-----~~~~lR~~~~~~~t~~~i 364 (375)
T PRK04260 305 LQDKET-------------VTTVR-GLGYMIGIETTAD-LSQLVEAARDKGLIVLTA-----GTNVIRLLPPLTLTKEEI 364 (375)
T ss_pred HhhCCC-------------eeEEe-ccceEEEEEecCc-HHHHHHHHHhCCCEEecC-----CCCEEEEcCCCccCHHHH
Confidence 543321 12222 3789999998543 444555566789999873 347899999 34 89999
Q ss_pred HHHHHHHHHHh
Q 024997 246 DLLLHRLDELI 256 (259)
Q Consensus 246 ~~~~~~l~~~l 256 (259)
++++++|++++
T Consensus 365 ~~~l~~l~~~~ 375 (375)
T PRK04260 365 EQGIAILSEVF 375 (375)
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 166
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.82 E-value=1.7e-18 Score=149.94 Aligned_cols=230 Identities=15% Similarity=0.090 Sum_probs=150.9
Q ss_pred hhhhhccCccc------ccccChhhhcccCC--CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-cCCCC
Q 024997 9 EQTDYFESVDY------KFEGEANLWGNASS--DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-FWPHF 74 (259)
Q Consensus 9 ~~~~~~g~~~~------~~~~d~~~l~~~~~--~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-~~~~~ 74 (259)
..++..|.++. ++.+|++++++.++ ++++++++++|+||||.+. .++|+++|+++|+|+++ |+...
T Consensus 97 ~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~ 176 (368)
T PRK13479 97 QIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIP 176 (368)
T ss_pred HHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcc
Confidence 55566676542 24578888988874 3567889999999999997 38999999999999765 43222
Q ss_pred CCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhh-----------------hcCCCCHHHHHHHHH
Q 024997 75 APIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISL-----------------NTMGVSRECQLRAFK 136 (259)
Q Consensus 75 ~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~q~~~~~ 136 (259)
..+ ...+..+++.|++|.+ |.+| +||++++ +++++.+...... ....++.+.+.++.+
T Consensus 177 ~~~-~~~~~d~~v~s~~K~l~g~~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~ 252 (368)
T PRK13479 177 IDI-AELGIDALISSANKCIEGVPG--FGFVIAR-RSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQ 252 (368)
T ss_pred ccc-cccCceEEEecCccccccCCC--ceEEEEC-HHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHH
Confidence 222 2234568888999965 7788 6999999 6888876543211 112455555555555
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---CchHHHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EEDKDCYGI 213 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l 213 (259)
+++...+ ...+++..++++++++.+.+.|++++ +.+ +.+. ....+..+.+.++. .+.+.+.+.
T Consensus 253 al~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (368)
T PRK13479 253 ALLELEE---EGGVPARGARYANNQRTLVAGMRALG-FEP--LLDA--------EIQSPIIVTFHAPADPAYDFKEFYER 318 (368)
T ss_pred HHHHHHH---hhCHHHHHHHHHHHHHHHHHHHHHcC-Ccc--cCCc--------hhcCceEEEEECCCCCCcCHHHHHHH
Confidence 5554311 12456677899999999999998874 211 0000 01111212222222 234556666
Q ss_pred HHHcCeeeecCCcccCCCCeEEEEe-ec-ChhhHHHHHHHHHHHhhh
Q 024997 214 LKAAKIIGREGKKFRAEARFVRLSL-LK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~~~~~~Ris~-~~-~~~~~~~~~~~l~~~l~~ 258 (259)
|.++||.+++|..+. .+++|+|. +. +.++++.+++.|++++++
T Consensus 319 L~~~gi~v~~g~~~~--~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 319 LKEQGFVIYPGKLTQ--VDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred HHHCCEEEecCCCCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 677899999876542 46899986 44 899999999999998764
No 167
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.82 E-value=3.6e-18 Score=147.61 Aligned_cols=229 Identities=13% Similarity=0.053 Sum_probs=157.4
Q ss_pred hhhhhccCccc------ccccChhhhcccCCC--CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCCC
Q 024997 9 EQTDYFESVDY------KFEGEANLWGNASSD--THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPHF 74 (259)
Q Consensus 9 ~~~~~~g~~~~------~~~~d~~~l~~~~~~--~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~~ 74 (259)
..++..|.+.. +..+|++.+++.++. +++++.+++++||||.+++ ++|+++|+++|+|+++ ++...
T Consensus 95 ~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~ 174 (363)
T TIGR02326 95 QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIP 174 (363)
T ss_pred HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcc
Confidence 44555676542 245788889988853 5677889999999999983 8999999999999877 33222
Q ss_pred CCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhh------------------hhhcCCCCHHHHHHHH
Q 024997 75 APIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYI------------------SLNTMGVSRECQLRAF 135 (259)
Q Consensus 75 ~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~------------------~~~~~~~~~~~q~~~~ 135 (259)
..+ ...+..++++|++|.+ |.+| +||++++ ++.++.+.... .......+.+.+.++.
T Consensus 175 ~~~-~~~~~D~~~~s~~K~l~~p~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~ 250 (363)
T TIGR02326 175 IDI-AELHIDYLISSANKCIQGVPG--FGFVIAR-QAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFA 250 (363)
T ss_pred cch-hhcCccEEEecCccccccCCc--ceEEEEC-HHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHH
Confidence 222 2334578999999977 5667 7999999 57777653210 0011245677777776
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---CchHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EEDKDCYG 212 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 212 (259)
++++...+ ...+++..++++++++.+.+.|++++ +.+ +.+ ....++...++.++. .+...+.+
T Consensus 251 ~al~~l~~---~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~ 316 (363)
T TIGR02326 251 QALLELEK---EGGVAARHQRYQQNQKTLVAGMRALG-FEP--LLD--------DEIQSPIITSFYSPEDPDYRFADFYQ 316 (363)
T ss_pred HHHHHHHH---hhCHHHHHHHHHHHHHHHHHHHHHcC-Cee--ccC--------cccCCceEEEEECCCCCCCCHHHHHH
Confidence 67764321 12356678899999999999998764 111 000 012455667777764 24455666
Q ss_pred HHHHcCeeeecCCcccCCCCeEEEEe-ec-ChhhHHHHHHHHHHHhh
Q 024997 213 ILKAAKIIGREGKKFRAEARFVRLSL-LK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~~~~~~Ris~-~~-~~~~~~~~~~~l~~~l~ 257 (259)
.|+++||.+++|..+. .+++|||+ +. +.++++.+++.|++++.
T Consensus 317 ~L~~~gi~v~~g~~~~--~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 317 RLKEQGFVIYPGKVSQ--VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHHCCEEEECCcCCC--CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 6778899999987663 47899996 54 89999999999998763
No 168
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=2.2e-18 Score=149.84 Aligned_cols=234 Identities=12% Similarity=0.092 Sum_probs=153.5
Q ss_pred hhhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCC
Q 024997 9 EQTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPAD 82 (259)
Q Consensus 9 ~~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~ 82 (259)
..++..|.++..+.. |++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|..+.. ..+...+
T Consensus 111 ~~~~~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-~~~~~~g 189 (390)
T PRK08064 111 EVLSRFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-QKPLDLG 189 (390)
T ss_pred HHHHHcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-cCchhhC
Confidence 334446766543333 67889888888999999999999999998 3889999999999999832111 1111234
Q ss_pred CeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 83 EELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 83 ~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
.++++.|+||.++ .+|+..|++++.++++++.++..........++...+. .++ .-+.+..++++..++.
T Consensus 190 ~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~------gl~tl~~R~~~~~~~a 260 (390)
T PRK08064 190 ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL---VLR------GLKTLHVRLEHSSETA 260 (390)
T ss_pred CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH---HHc------ccCcHHHHHHHHHHHH
Confidence 5789999999985 56677788877656899988887776555555543332 223 3346778899999999
Q ss_pred HHHHHHHHhcCCCccccccccc----cccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe---eeecC----------
Q 024997 162 ENLSKIISLSNRFSLQEIAPQY----CTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI---IGREG---------- 224 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~~~~g---------- 224 (259)
..+.+.|++.+.+.-...+... ...++......|..+.+.+.. .+.+..++++.++ .++-|
T Consensus 261 ~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~ 338 (390)
T PRK08064 261 NKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EEAVRQFVSHVKLPVFAVSLGAVESILSYPA 338 (390)
T ss_pred HHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHHhCCcceEcccCCCCcceeECCc
Confidence 9999999998865433333211 111221122334455566653 4567788888887 55556
Q ss_pred --Cccc----------CCCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 225 --KKFR----------AEARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 225 --~~f~----------~~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
.+.. .+++.+|+|++- .++.++++.+.|++
T Consensus 339 ~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 339 KMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 2222 125789999987 23335555555544
No 169
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.81 E-value=3.9e-18 Score=147.55 Aligned_cols=231 Identities=14% Similarity=0.090 Sum_probs=150.3
Q ss_pred hccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEE
Q 024997 13 YFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELM 86 (259)
Q Consensus 13 ~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~ 86 (259)
..|.++..+.. |++++++.+++++++|++.+|+||+|.+. .++|+++|+++|+|++|-.+.. .-+-..+.+++
T Consensus 102 ~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-~~~~~~g~Div 180 (369)
T cd00614 102 KLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-QRPLELGADIV 180 (369)
T ss_pred hcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-CChhhhCCcEE
Confidence 34555433333 46788888888899999999999999998 3889999999999999821111 11112345799
Q ss_pred EeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 87 ~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
+.|+||.++.+| ++.||+++++++++++++......+.+.+++.++++...++ .+..++++..++...+.
T Consensus 181 v~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~---------tl~~r~~~~~~na~~la 251 (369)
T cd00614 181 VHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK---------TLPLRMERHSENALKVA 251 (369)
T ss_pred EeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC---------CHHHHHHHHHHHHHHHH
Confidence 999999997665 89999999844888988887766667777776665544443 45567888999999999
Q ss_pred HHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee---ecC------------Cc
Q 024997 166 KIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG---REG------------KK 226 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~---~~g------------~~ 226 (259)
+.|++.+.+....++..... .++......|..+.+.++. +.+.+.++++.-.+.. .-| .+
T Consensus 252 ~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~ 330 (369)
T cd00614 252 EFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTH 330 (369)
T ss_pred HHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHHHHHHHHcCCcceEcccCCCCceeeeCCccccc
Confidence 99999886543323321000 0111112234455566653 4555666666655541 111 11
Q ss_pred c----------cCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 227 F----------RAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 227 f----------~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
. +.+++.+|+|++- |+.+++++-|.+.+
T Consensus 331 ~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 331 SQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 1 1125789999988 44555666555544
No 170
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.81 E-value=1.1e-18 Score=151.21 Aligned_cols=213 Identities=15% Similarity=0.052 Sum_probs=141.8
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCC-CCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHF-APIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~-~~~~~~~~~~i~~~S~SK~~ 94 (259)
+.+|+++|++.+.++++++++++|+||||.+. .++|+++|+++++|++|..+.. ..+ ...+..+++.|++|.+
T Consensus 125 ~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~d~~~~s~~K~~ 203 (373)
T cd06453 125 GQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDV-QDLGCDFLAFSGHKML 203 (373)
T ss_pred CCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeec-cccCCCEEEecccccc
Confidence 45788999999988999999999999999997 3889999999999998831111 111 1224567788999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhhhhh---------------------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVYQRMSAYISLN---------------------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFG 153 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 153 (259)
+. .++|+++++ +++++.+....... ...++.....+..++++... +.-+++.
T Consensus 204 ~~--~g~g~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~----~~g~~~~ 276 (373)
T cd06453 204 GP--TGIGVLYGK-EELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLE----KIGMEAI 276 (373)
T ss_pred CC--CCcEEEEEc-hHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHH----HcCHHHH
Confidence 85 458999998 68888766532110 01223333333344444321 1123556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC----
Q 024997 154 YNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA---- 229 (259)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~---- 229 (259)
.++.+++++.+.+.|++++++.+. .+ ....+..+++.++..+.+.+.+.|.++||.+.+|..+..
T Consensus 277 ~~~~~~~~~~l~~~l~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~ 345 (373)
T cd06453 277 AAHEHELTAYALERLSEIPGVRVY--GD---------AEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMR 345 (373)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEe--CC---------ccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHH
Confidence 777778888888888876543221 00 111234556666654555666666779999988875531
Q ss_pred ---CCCeEEEEeec--ChhhHHHHHHHH
Q 024997 230 ---EARFVRLSLLK--SQDDFDLLLHRL 252 (259)
Q Consensus 230 ---~~~~~Ris~~~--~~~~~~~~~~~l 252 (259)
..+++|+|++. +.++++++++.|
T Consensus 346 ~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 346 RLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 25799999975 889999988764
No 171
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.81 E-value=1.2e-18 Score=153.48 Aligned_cols=210 Identities=10% Similarity=-0.010 Sum_probs=140.1
Q ss_pred hhhcccCC-----CCceEEEEcCC--CCCChhhH--------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEE
Q 024997 26 NLWGNASS-----DTHLVEFVTAP--NNPDGQMN--------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMI 87 (259)
Q Consensus 26 ~~l~~~~~-----~~~~~i~i~~p--~NPtG~~~--------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~ 87 (259)
+.|++.+. ++..+ ++..| +|+.+... .++|+++|+++|+||+| ++....... +..+.+..+
T Consensus 185 ~~l~~~l~~~~~~~~~aa-vi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi 263 (425)
T PRK08088 185 ASIERIFKNDAAPEDIAA-IIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADL 263 (425)
T ss_pred HHHHHHHHhccCCCceEE-EEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCE
Confidence 34666553 34455 55555 46644443 28999999999999998 322111111 122334558
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
.||||.++ +|+|+||++++ +++++.+.......+.+.+++.|.++.++++.. ..+++++..++..+..++.+...
T Consensus 264 ~s~sK~l~-~G~rig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~l 338 (425)
T PRK08088 264 TTFAKSIA-GGFPLAGVTGR-AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVF---EQENLLQKANALGEKLKDGLLAI 338 (425)
T ss_pred EEEecccc-CCCcceeeEec-HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999998 99999999999 799999877777778889999999999999864 23345555554444444444433
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
++..+. +...... |+++|+.+... ....+...+.++||.+.|+..+ ++.+||++
T Consensus 339 ~~~~~~-------------~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~---~~~iRl~~ 401 (425)
T PRK08088 339 AEKHPE-------------IGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY---YNVLRILV 401 (425)
T ss_pred HHhCCC-------------eEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC---CCEEEEEC
Confidence 333321 2222333 88899988321 1233444455689988875444 37899999
Q ss_pred ec--ChhhHHHHHHHHHHHhhh
Q 024997 239 LK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+. +++++++++++|.+.+..
T Consensus 402 ~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 402 PLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CCCcCHHHHHHHHHHHHHHHHh
Confidence 73 899999999999998875
No 172
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.81 E-value=3.2e-18 Score=147.80 Aligned_cols=225 Identities=9% Similarity=0.039 Sum_probs=137.9
Q ss_pred hhhhhccCccc--------ccccChhhhcccCC-------CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 9 EQTDYFESVDY--------KFEGEANLWGNASS-------DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 9 ~~~~~~g~~~~--------~~~~d~~~l~~~~~-------~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
..++..|.++. .|.+|++.|++.++ ++++++++++|+||||.+. .++|+++|+++|+|++
T Consensus 98 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a 177 (361)
T cd06452 98 VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGA 177 (361)
T ss_pred HHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECC
Confidence 34566666542 24678888888774 3688999999999999986 3789999999999999
Q ss_pred ccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc------C--CCCHHHHHHHHHHHH
Q 024997 69 YFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT------M--GVSRECQLRAFKLLK 139 (259)
Q Consensus 69 y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~------~--~~~~~~q~~~~~~l~ 139 (259)
|.... ..+. ...+.+++++|+||.++ ++.|+||++++ +++++++........ . ......+..+.+.++
T Consensus 178 ~~~g~-~~~~~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 254 (361)
T cd06452 178 YTVGR-MPVSGKELGADFIVGSGHKSMA-ASAPIGVLATT-EEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP 254 (361)
T ss_pred cccCC-cCCCHHHcCCCEEEecCCcccc-CCCCeEEEEEC-HHHHHHHhccccccccceeeeeccccCchHHHHHHHHHH
Confidence 93111 1121 12356899999999998 56699999999 699998866443210 1 111112333333343
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chHHH
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDKDC 210 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 210 (259)
. ..+++.+.. +..++.+.+.+.|++++++.+... .+....++.++.+.. ....+
T Consensus 255 ~-----~~~~~~~~~-~~~~~~~~l~~~L~~l~g~~v~~~-----------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 317 (361)
T cd06452 255 H-----VKERVKRWD-EEVEKARWFVAELEKIEGIKQLGE-----------KPKNHDLMFFETPSFDEIAKKHKRRGYFL 317 (361)
T ss_pred H-----HHHHHHHHH-HHHHHHHHHHHHHhcCCCeEEECC-----------CCCCCceEEEEcCCcchhhhhccccchhH
Confidence 2 112232222 223445777888887754322100 112233444443311 11234
Q ss_pred HHHHHHcCeeeecCCcccCCCCeEEEEee-cChhhHHHHHHHHHHHhh
Q 024997 211 YGILKAAKIIGREGKKFRAEARFVRLSLL-KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-~~~~~~~~~~~~l~~~l~ 257 (259)
.+.|.++||.+. +....+++|++.. .++++++.+++.|+++.+
T Consensus 318 ~~~L~~~gI~~~----~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~~ 361 (361)
T cd06452 318 YSELKKRGIHGI----KPGLTRYFKLSTYGLTWEQVEYVVDAFKEIAE 361 (361)
T ss_pred HHHHHHcCceEE----cCCCceEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 455556799842 1222468999983 489999999999987653
No 173
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=5.4e-18 Score=147.34 Aligned_cols=220 Identities=14% Similarity=0.112 Sum_probs=143.8
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCC-CCCCCCCCCCeEEEeccccccCC
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPH-FAPIPAPADEELMIFTISKLTGH 96 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~-~~~~~~~~~~~i~~~S~SK~~g~ 96 (259)
.|+++|++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+. ..++ ..+..+++.|+||.++.
T Consensus 134 ~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~--~~gaDivv~S~sK~l~g 211 (388)
T PRK07811 134 SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL--ALGADVVVHSTTKYIGG 211 (388)
T ss_pred CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch--hhCCcEEEecCceeecC
Confidence 578889999988999999999999999987 388999999999999982111 1111 22346999999999976
Q ss_pred C-cceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 024997 97 A-GSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFS 175 (259)
Q Consensus 97 ~-G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 175 (259)
+ +.+.||++++++++.+.+...........++...+.+...++ .+..++++.+++...+.+.|++.+.+.
T Consensus 212 ~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~---------tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 212 HSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK---------TLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred CCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---------cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 4 467899998766787777766555455566665444444443 466678888999999999999998776
Q ss_pred ccccccccccc----ceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc-----------------------
Q 024997 176 LQEIAPQYCTY----FKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR----------------------- 228 (259)
Q Consensus 176 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~----------------------- 228 (259)
....|...... ++......|-.+.++++. +.+.+.+++++-.+. ..+.++|
T Consensus 283 ~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~-~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g 360 (388)
T PRK07811 283 TVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG-GEEAARDFCARTKVF-TLAESLGGVESLIEHPSAMTHASTAGSQLE 360 (388)
T ss_pred EEECCCCCCCchHHHHHHhcCCCCceEEEEeCC-CHHHHHHHHHhCCcc-eeeccCCCCcceEeCCcccCcccCCHhhcC
Confidence 44444321110 111111234455667753 344455666554441 1121221
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++.+|||++- |+.+++++-|.+.|+
T Consensus 361 i~~~liR~svGl--E~~~dl~~dl~~al~ 387 (388)
T PRK07811 361 VPDDLVRLSVGI--EDVADLLADLEQALG 387 (388)
T ss_pred CCCCEEEEEeCC--CCHHHHHHHHHHHhh
Confidence 125789999987 344555555555553
No 174
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.80 E-value=6.2e-18 Score=146.71 Aligned_cols=197 Identities=13% Similarity=0.162 Sum_probs=130.6
Q ss_pred hhhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCC-CCCCCCCC
Q 024997 9 EQTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPH-FAPIPAPA 81 (259)
Q Consensus 9 ~~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~-~~~~~~~~ 81 (259)
..+...|..+..+.. |++++++.+++++++|++++|+||+|.+. .++|+++|+++|+|++|-.+. ..++ ..
T Consensus 112 ~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl--~~ 189 (380)
T TIGR01325 112 EILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL--KL 189 (380)
T ss_pred HHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch--hh
Confidence 344555665543333 57788888888899999999999999987 388999999999999982111 1111 22
Q ss_pred CCeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 82 DEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 82 ~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+.++++.|+||.++.+|.++ |+++++ +++++.++..........++...+.+ ++ ..+.+..+.++..++
T Consensus 190 g~Divv~S~sK~l~g~g~~~gG~vv~~-~~~~~~l~~~~~~~g~~~~p~~a~~~---l~------~l~tl~~r~~~~~~~ 259 (380)
T TIGR01325 190 GADVVVYSATKHIDGQGRVMGGVIAGS-EELMAEVAVYLRHTGPAMSPFNAWVL---LK------GLETLSLRMQKQFDS 259 (380)
T ss_pred CCCEEEeeccceecCCCCeEEEEEEeC-HHHHHHHHHHHHhhCCCCCHHHHHHH---Hh------ccCcHHHHHHHHHHH
Confidence 45788999999998888887 677777 68888888776655555566544433 33 234666788899999
Q ss_pred HHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
+..+.+.|++++.+.....|..... .++......|..+.+.++ +.+.+.++++.-.+
T Consensus 260 a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~--~~~~~~~f~~~l~~ 320 (380)
T TIGR01325 260 ALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA--DRAAAWKVLDAVEL 320 (380)
T ss_pred HHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--CHHHHHHHHHcCCc
Confidence 9999999999886653333321111 122112233445666676 34545555554443
No 175
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.80 E-value=4.7e-18 Score=148.36 Aligned_cols=158 Identities=16% Similarity=0.194 Sum_probs=115.3
Q ss_pred hhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCC-CCCCCCCCCC
Q 024997 11 TDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPH-FAPIPAPADE 83 (259)
Q Consensus 11 ~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~-~~~~~~~~~~ 83 (259)
+...|.++..+.+ |++.+++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+. ..++ ..+.
T Consensus 125 ~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l--~~g~ 202 (403)
T PRK07503 125 LGEFGVTVRHVDLTDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL--ELGA 202 (403)
T ss_pred HhhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch--hhCC
Confidence 3445665543333 57889998888999999999999999997 388999999999999992111 1111 1244
Q ss_pred eEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHh--hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 84 ELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY--ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 84 ~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+++++|+||.++.+| +|.|+++.+ ++++++++.. ....+.+.+++.++.+.+.++ .+..+.++..++
T Consensus 203 Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~---------tl~~r~~~~~~n 272 (403)
T PRK07503 203 DLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK---------TLALRMDRHCAS 272 (403)
T ss_pred CEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc---------hHHHHHHHHHHH
Confidence 699999999998765 788999977 7888888743 333456677776665554444 556667777899
Q ss_pred HHHHHHHHHhcCCCcccccc
Q 024997 161 WENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~ 180 (259)
...+.+.|++.+.+.....|
T Consensus 273 a~~~a~~L~~~p~v~~V~~P 292 (403)
T PRK07503 273 AQAVAEWLARHPAVELVHYP 292 (403)
T ss_pred HHHHHHHHHhCCCccEEECC
Confidence 99999999998876644444
No 176
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.80 E-value=2.7e-18 Score=150.28 Aligned_cols=209 Identities=11% Similarity=0.053 Sum_probs=141.2
Q ss_pred cChhhhcccCC-CCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCCCC--C--CCCCCCeEE
Q 024997 23 GEANLWGNASS-DTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHFAP--I--PAPADEELM 86 (259)
Q Consensus 23 ~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~~~--~--~~~~~~~i~ 86 (259)
.|+++|++.+. ++++++++..++||||.+++ ++|+++|+++|+||+| ++..... . .+..+ .
T Consensus 165 ~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~p-d-- 241 (400)
T PTZ00125 165 NDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKP-D-- 241 (400)
T ss_pred CCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCC-C--
Confidence 37888998885 67889888888999998873 7899999999999998 4221111 1 11111 2
Q ss_pred EeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSK 166 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (259)
+.++||.++..++|+||++++ +++++.+.......+.+.+++.|.++.+.++...++ + ..++.+++.+.+.+
T Consensus 242 ~~~~sK~l~~g~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~---~----~~~~~~~~~~~l~~ 313 (400)
T PTZ00125 242 IVLLGKALSGGLYPISAVLAN-DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEE---K----LAENAQRLGEVFRD 313 (400)
T ss_pred EEEEcccccCCCcCcEEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---C----HHHHHHHHHHHHHH
Confidence 335789998444699999999 699998876555556778899999888887754211 2 23445555566666
Q ss_pred HHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---c-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--c
Q 024997 167 IISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---E-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--K 240 (259)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~ 240 (259)
.|+++.. .. ..+....+ .|.+.++.++.. . .++...++ ++||.+.|+ +.+++||+.. .
T Consensus 314 ~l~~l~~----~~-----~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----~~~~lRi~~~~~~ 377 (400)
T PTZ00125 314 GLKELLK----KS-----PWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPT-----HDNIIRFAPPLVI 377 (400)
T ss_pred HHHHHHh----cC-----CCeEEEec-ccEEEEEEEccCcchHHHHHHHHHH-HCCeEEeec-----CCCEEEEECCccC
Confidence 6654311 00 01222333 566667766531 2 34444444 789999874 3478999964 5
Q ss_pred ChhhHHHHHHHHHHHhhh
Q 024997 241 SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~ 258 (259)
+++++++++++|.+++.+
T Consensus 378 ~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 378 TKEQLDQALEIIKKVLKS 395 (400)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999988763
No 177
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=6.7e-18 Score=146.50 Aligned_cols=243 Identities=14% Similarity=0.088 Sum_probs=155.4
Q ss_pred CCCcccchhhhhh---ccCcccccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccC
Q 024997 1 MPFYPLYQEQTDY---FESVDYKFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 1 ~P~y~~~~~~~~~---~g~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~ 71 (259)
+|.|+.+...++. .|.++..+.+|++++++.+++ ++++|++++|+||||.++ .++|+++|+++|+|++|-.
T Consensus 99 ~~~y~~~~~~~~~~~~~g~~v~~~~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~ 178 (385)
T PRK08574 99 MEAYGTTLRLLKSLEKFGVKVVLAYPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFAT 178 (385)
T ss_pred CCCchhHHHHHHHhhccCcEEEEECCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc
Confidence 3677776655533 355554456788889999987 899999999999999998 3889999999999999821
Q ss_pred CC-CCCCCCCCCCeEEEeccccccCCCcce-EEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 72 PH-FAPIPAPADEELMIFTISKLTGHAGSR-FGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 72 ~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R-~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
+. ..++ ..+.++++.|+||.++.+|-. .|++++.++++.++++......+.+.+++..+.+...++ .
T Consensus 179 ~~~~~~l--~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~---------t 247 (385)
T PRK08574 179 PLLYRPL--RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK---------T 247 (385)
T ss_pred cccCChh--hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---------c
Confidence 11 1111 234589999999999766655 476666547888888877766666677764444444433 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc----ceeeCC--CCCeeEEEecCCCchHHHHHHHHHcCeee--
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY----FKKIRP--PSPAYAWVKCEREEDKDCYGILKAAKIIG-- 221 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gi~~-- 221 (259)
+..+.++..++...+.+.|++.+.+.....|....+. .+.... ..|..+.++++. +.+.+.+++++-.+..
T Consensus 248 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~~~~~l~l~~~~ 326 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG-GRDAVLKFLRSLKLIKPS 326 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC-CHHHHHHHHHcCCcceEc
Confidence 6667888888999999999998876544444322110 111111 134455666653 3455556665544422
Q ss_pred -ecCCcc----------------------cCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 222 -REGKKF----------------------RAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 222 -~~g~~f----------------------~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.-|... +..++.+|||++- |+.+.+++-|.+.++
T Consensus 327 ~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dli~dl~~al~ 383 (385)
T PRK08574 327 PSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL--EDVEDLIEDLDQALG 383 (385)
T ss_pred cCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 112111 1124689999987 334445555555443
No 178
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.79 E-value=5.5e-18 Score=147.28 Aligned_cols=216 Identities=17% Similarity=0.122 Sum_probs=142.0
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCCCCC-CCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~ 94 (259)
+.+|++++++.++++++++++++++||||.+++ ++|+++|+++++|+++..+. .++. ...+.++++.|.+|.+
T Consensus 122 g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~-~~~~~~~~~~D~~~~s~~K~~ 200 (379)
T TIGR03402 122 GRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGK-IPIDLKEMNIDMLSLSGHKLH 200 (379)
T ss_pred CcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccc-cccCcccCCCCEEEEcHHHcC
Confidence 357889999999889999999999999999994 89999999999999883111 1221 2345578888999988
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhhh-------hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVYQRMSAYIS-------LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
|.+| +|++++.+ +.. +..... .....++.+.-.+..++++. ...++++..++.+++++.+.+.
T Consensus 201 gp~G--~g~l~v~~-~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~-----~~~~~~~~~~~~~~l~~~l~~~ 270 (379)
T TIGR03402 201 GPKG--VGALYIRK-GTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAEL-----ATEHLEEENTRVRALRDRLEAG 270 (379)
T ss_pred CCCc--eEEEEECC-CCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHH
Confidence 8778 88888773 431 111110 01112223333334444443 1234566677888888888888
Q ss_pred HHh-cCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCC----------------
Q 024997 168 ISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAE---------------- 230 (259)
Q Consensus 168 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~---------------- 230 (259)
|++ ++++.+.. + ......+...+|+ +..+.+.+...|+++||.+++|..|..+
T Consensus 271 l~~~~~~~~~~~--~------~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~ 340 (379)
T TIGR03402 271 LLARIPDARLNG--D------PTKRLPNTVNISF--EYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHT 340 (379)
T ss_pred HHhhCCCEEEeC--C------CccCCCCEEEEEe--cCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChh
Confidence 875 55432211 0 0000012233444 3334566666778899999999877532
Q ss_pred --CCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 231 --ARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 231 --~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.+.+|+|++. +.++++++++.|+++++
T Consensus 341 ~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~ 371 (379)
T TIGR03402 341 AAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA 371 (379)
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 3689999976 88999999999998765
No 179
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.79 E-value=5.4e-18 Score=148.49 Aligned_cols=210 Identities=16% Similarity=0.071 Sum_probs=147.9
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEec
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFT 89 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S 89 (259)
.|.+.|++.+.++++++++ +|.||+|.+. .++|+++|+++|+||+| |+....... ...+...-+.|
T Consensus 171 ~d~~~l~~~l~~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t 249 (406)
T PRK12381 171 NDLNSASALIDDQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLT 249 (406)
T ss_pred CCHHHHHHhccCCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEE
Confidence 5678888888777777555 7999999764 28999999999999999 422111111 01111111469
Q ss_pred cccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 90 ISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 90 ~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
+||.++ .|+|+||++++ +++++.+.......+++.+++.|.++.+.++... -++.+++++++.+.+.+.|+
T Consensus 250 ~sK~l~-gG~~ig~~~~~-~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-------~~~~~~~~~~~~~~l~~~L~ 320 (406)
T PRK12381 250 TAKALG-GGFPIGAMLTT-EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN-------TPEMLNGVKQRHDWFVERLN 320 (406)
T ss_pred ehhhhh-CCCceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-------hccHHHHHHHHHHHHHHHHH
Confidence 999998 89999999999 6999988765555677889999999999887531 12357788888888888887
Q ss_pred hcCCCccccccccccccceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhh
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDD 244 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~ 244 (259)
++.. .. ..+.. ....|.++++.+... ....+...+.++||.+.+. +++.+||++. .++++
T Consensus 321 ~l~~----~~-----~~~~~-vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-----g~~~lRl~p~~~~t~~~ 385 (406)
T PRK12381 321 TINA----RY-----GLFSE-IRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-----GPNVVRFAPALNISEEE 385 (406)
T ss_pred HHHh----hC-----CCEEE-EecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC-----CCCEEEEeCCccCCHHH
Confidence 6531 00 00111 223467777776542 2345556677899999762 3478999985 48999
Q ss_pred HHHHHHHHHHHhh
Q 024997 245 FDLLLHRLDELIS 257 (259)
Q Consensus 245 ~~~~~~~l~~~l~ 257 (259)
+++++++|.+++.
T Consensus 386 i~~~~~~l~~~l~ 398 (406)
T PRK12381 386 ITTGLDRFARACE 398 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 180
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.79 E-value=9.7e-18 Score=145.29 Aligned_cols=243 Identities=14% Similarity=0.097 Sum_probs=156.0
Q ss_pred CCcccchhh----hhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccC
Q 024997 2 PFYPLYQEQ----TDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 2 P~y~~~~~~----~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~ 71 (259)
|.|+.+... +...|.++..+. .|++++++.++++++++++++|+||||.+. .++|+++|+++|+|++|..
T Consensus 93 ~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 93 DLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred CCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence 556554443 233566654333 368889999998999999999999999887 3889999999999999842
Q ss_pred CC-CCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 72 PH-FAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 72 ~~-~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
+. ..++ ..+-+++++|++|.++ ..|++.|++++.++++.+++.........+.++...+.+.. .-+.
T Consensus 173 ~~~~~~l--~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~---------~l~t 241 (378)
T TIGR01329 173 PLLCNPL--ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLR---------GIKT 241 (378)
T ss_pred cccCChh--hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHc---------cCCC
Confidence 21 1112 2245799999999885 45688999998656777878776664555666654432222 3346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc-c---ceeeCCCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecC
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT-Y---FKKIRPPSPAYAWVKCEREE-DKDCYGILKAAKIIGREG 224 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g 224 (259)
+..+.++..++...+.+.|++.+.+....++..... . ++......|..+.+++...+ ...+...|+..++.++.|
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G 321 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFG 321 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCC
Confidence 777899999999999999999887643333321111 0 11111123345555664322 344555566667777777
Q ss_pred Cccc----------------------CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 225 KKFR----------------------AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 225 ~~f~----------------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.... .+++.+|||++- |+.+++++-|.+.|+
T Consensus 322 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 374 (378)
T TIGR01329 322 SVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAFV 374 (378)
T ss_pred CCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHH
Confidence 4321 125789999987 334445555554443
No 181
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=6.5e-18 Score=147.91 Aligned_cols=208 Identities=12% Similarity=0.050 Sum_probs=143.4
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCC--CC--CCCCCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHF--AP--IPAPADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~--~~--~~~~~~~~i~~ 87 (259)
.|++.|++.+.+++++|++++|+||+|.+++ ++|+++|+++|+||+| ++... .. ..+... .+.
T Consensus 175 ~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~-D~~- 252 (401)
T PRK00854 175 GDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEA-DVT- 252 (401)
T ss_pred CCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCC-CEE-
Confidence 5788899999888999999999999998872 7899999999999999 32111 00 111111 222
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
.+||.++...+|+||++++ +++++.+.......+++.+++.|+++.+.|+... . ....+.++++.+.+.+.
T Consensus 253 -~~~K~l~gg~~~ig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~---~----~~~~~~~~~~~~~l~~~ 323 (401)
T PRK00854 253 -LIGKALSGGFYPVSAVLSN-SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLT---E----EGMIENAAEMGAYFLEG 323 (401)
T ss_pred -EecccccCCccCeEEEEEc-HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHH---H----cCHHHHHHHHHHHHHHH
Confidence 2479997444799999999 6999888655555567789999999999998531 1 12467788888888888
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCC-CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhh
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDD 244 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~ 244 (259)
|+++... ......+.+.++.+.-... .+...+.+.|.++||.+.+ .+.+++|+++. .++++
T Consensus 324 L~~~~~~-----------~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~-----~~~~~lR~~p~~~~t~e~ 387 (401)
T PRK00854 324 LRSIRSN-----------IVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKD-----THDHTIRLAPPLVITREQ 387 (401)
T ss_pred HHhhccC-----------ceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEec-----CCCCEEEEeCCcccCHHH
Confidence 8865420 0122244455554432222 1233344444467999865 23479999963 49999
Q ss_pred HHHHHHHHHHHhh
Q 024997 245 FDLLLHRLDELIS 257 (259)
Q Consensus 245 ~~~~~~~l~~~l~ 257 (259)
+++++++|++++.
T Consensus 388 i~~~i~~l~~~l~ 400 (401)
T PRK00854 388 VDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998874
No 182
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1.2e-17 Score=144.65 Aligned_cols=186 Identities=10% Similarity=0.021 Sum_probs=130.8
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccC-C
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTG-H 96 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g-~ 96 (259)
.|++++++.+++++++|++++|+||||.++ .++|+++|+++|+|++|..+.. ..+-..+-+++++|++|.++ .
T Consensus 126 ~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-~~pl~~GaDivv~S~tK~l~G~ 204 (388)
T PRK08861 126 SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-QKPLELGADFVIHSTTKYINGH 204 (388)
T ss_pred CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-CCCcccCCCEEEeecceeccCC
Confidence 467889888888999999999999999998 3889999999999999932111 11112245799999999986 4
Q ss_pred CcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 97 AGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 97 ~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
.+++.|++++.++++.+.++......+...++...+.+.+.+ +.+..++++..++...+.+.|+..+.+..
T Consensus 205 ~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl---------~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~ 275 (388)
T PRK08861 205 SDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI---------RTLGARMRVHEESAQQILAYLQTQSLVGT 275 (388)
T ss_pred CcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC---------CCHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence 568899998865688888887777777778887666544444 46777899999999999999999987654
Q ss_pred cccccccccc----ceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 177 QEIAPQYCTY----FKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 177 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
...|....+. ++......|-.+.+.++. +.+.+.++++.-.+
T Consensus 276 V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~~f~~~l~l 321 (388)
T PRK08861 276 IYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-SFEQLKVFVKALAL 321 (388)
T ss_pred EECCCCCCCchHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHhcCCc
Confidence 4444322211 222122234455666753 34555555554443
No 183
>PLN00144 acetylornithine transaminase
Probab=99.79 E-value=6.3e-18 Score=146.71 Aligned_cols=207 Identities=13% Similarity=0.093 Sum_probs=137.8
Q ss_pred ChhhhcccCC-CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCC--CC--CCC-CCCCeEE
Q 024997 24 EANLWGNASS-DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHF--AP--IPA-PADEELM 86 (259)
Q Consensus 24 d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~--~~--~~~-~~~~~i~ 86 (259)
|++.|++.+. .+++++++..-+||.|... .++|+++|+++|+||+| |+... .. ..+ .+|
T Consensus 155 d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---- 230 (382)
T PLN00144 155 NLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---- 230 (382)
T ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC----
Confidence 6778888774 3566645444478844433 28999999999999998 42211 11 112 233
Q ss_pred EeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSK 166 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (259)
+.||||.++ +|+|+||++++ +++.+.+.......+++.+++.+.++.+.++...++ +. .+.+++..+.+.+
T Consensus 231 i~t~sK~l~-~G~pig~v~~~-~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~---~~----~~~~~~~g~~l~~ 301 (382)
T PLN00144 231 IMTLAKPLA-GGLPIGAVLVT-EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKP---GF----LASVAKKGEYLRE 301 (382)
T ss_pred EEEeccccc-CCcceEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhc---hH----HHHHHHHHHHHHH
Confidence 899999997 89999999999 799998876556677889999999999777654222 22 3333344444444
Q ss_pred HHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--Chhh
Q 024997 167 IISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDD 244 (259)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~ 244 (259)
.|+++. ...+. +..+.. .|+++|+.+... .+.+...+.++||.+.|+. . .+.+|++++. ++++
T Consensus 302 ~l~~~~----~~~~~-----~~~vrg-~G~~~~l~l~~~-~~~~~~~~~~~Gv~i~~~~---~-~~~lrl~p~~~~~~~~ 366 (382)
T PLN00144 302 LLRRKL----GGNPH-----VKEVRG-VGLLVGIQLDVP-AGPLVDACRDSGLLVLTAG---K-GDVVRLVPPLVISEAE 366 (382)
T ss_pred HHHHHH----hhCCC-----ceeeec-CceEEEEEecCc-cHHHHHHHHHCCeEEeecC---C-CCEEEEeCCCccCHHH
Confidence 443321 00000 212223 789999988432 3444455567999998862 1 3789999864 8899
Q ss_pred HHHHHHHHHHHhhh
Q 024997 245 FDLLLHRLDELISK 258 (259)
Q Consensus 245 ~~~~~~~l~~~l~~ 258 (259)
+++++++|.+.+.+
T Consensus 367 i~~~~~~l~~~l~~ 380 (382)
T PLN00144 367 LEQAVEILADCLPA 380 (382)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 184
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.79 E-value=2.9e-18 Score=150.66 Aligned_cols=208 Identities=15% Similarity=0.099 Sum_probs=138.4
Q ss_pred ChhhhcccCCC---CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEE
Q 024997 24 EANLWGNASSD---THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMI 87 (259)
Q Consensus 24 d~~~l~~~~~~---~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~ 87 (259)
|++.|++.+.+ ++++ ++++| +|++|.++ .++|+++|+++|+||+| |+....... ...+....+
T Consensus 177 d~~~l~~~l~~~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~ 255 (413)
T cd00610 177 DLEALEEALEEHPEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDI 255 (413)
T ss_pred HHHHHHHHHhcCCCCEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCe
Confidence 77788888754 4556 55555 56668765 27899999999999999 422111111 111112235
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHH--HHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRM--SAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~--~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
.|+||.++ .|+|+||++++ +++++.+ .......+.+.+++.|.++.+.++...+ .+..++++++.+.+.
T Consensus 256 ~t~sK~l~-~g~~~g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-------~~~~~~~~~~~~~l~ 326 (413)
T cd00610 256 VTLGKGLG-GGLPLGAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-------EGLLENAAELGEYLR 326 (413)
T ss_pred EEEccccc-CccccEEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHH
Confidence 69999998 58999999998 7999986 3334445678889999988888875311 234667777777787
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chHHHHHHHHHcCeeeecCCcccCCCCeEEE
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDKDCYGILKAAKIIGREGKKFRAEARFVRL 236 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ri 236 (259)
+.|+.+... .+ .... ....|.++++.+... ....+.+.|.++||.+.|+. ++.+|+
T Consensus 327 ~~l~~~~~~-----~~----~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-----~~~lR~ 391 (413)
T cd00610 327 ERLRELAEK-----HP----LVGD-VRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-----GNVIRL 391 (413)
T ss_pred HHHHHHHhh-----CC----cEEE-eecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-----CCEEEE
Confidence 777765320 00 0111 223456667766432 23445555667899999964 478999
Q ss_pred Eeec--ChhhHHHHHHHHHHHh
Q 024997 237 SLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 237 s~~~--~~~~~~~~~~~l~~~l 256 (259)
+++. +++++++++++|.+++
T Consensus 392 ~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 392 LPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred ECCCcCCHHHHHHHHHHHHHhC
Confidence 8754 8899999999998764
No 185
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.78 E-value=1.1e-17 Score=145.48 Aligned_cols=232 Identities=13% Similarity=0.064 Sum_probs=145.1
Q ss_pred hhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCe
Q 024997 11 TDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEE 84 (259)
Q Consensus 11 ~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~ 84 (259)
+...|.++..+.+ |++++++.+++++++|++++|+||+|.+. .++|+++|+++|+|++|-.+ ...-+-.....
T Consensus 119 ~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~-~~~~~~~~g~D 197 (391)
T TIGR01328 119 LTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATP-MLTNPVALGVD 197 (391)
T ss_pred HhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchh-ccCCchhcCCC
Confidence 3445655543333 57788888888899999999999999997 38899999999999998211 11111122446
Q ss_pred EEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhh--hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYIS--LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
++++|+||.+|.+|.++ |+++++ +++++.++.... ..+...++...+.+...++ .+..++++..++.
T Consensus 198 ivv~S~sK~lgg~g~~~gG~v~~~-~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---------tl~~r~~~~~~na 267 (391)
T TIGR01328 198 VVVHSATKYIGGHGDVVAGLICGK-AELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---------TLNIRMKRHSENA 267 (391)
T ss_pred EEEccccccccCCCCceEEEEEcC-HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---------cHHHHHHHHHHHH
Confidence 89999999999888775 677766 798888875432 2233455554444443333 4556788899999
Q ss_pred HHHHHHHHhcCCCcccccccccccc----ceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc---------
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTY----FKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR--------- 228 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~--------- 228 (259)
..+.+.|++.+.+.....|+...+. ++......|-.+.++++. +.+.+.+++++-.+.. .+.++|
T Consensus 268 ~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~-~~~~~~~f~~~l~~~~-~~~s~G~~~sl~~~~ 345 (391)
T TIGR01328 268 MKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG-GFAGAKKLLNNLKLIR-LAVSLGDAETLIQHP 345 (391)
T ss_pred HHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHHhCCcce-EecCCCCCcccCcCC
Confidence 9999999999877654444322210 111112223345566653 3444555665444421 121111
Q ss_pred -----------------CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 -----------------AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 -----------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++.+|||++- |+.+++++-|.+.|+
T Consensus 346 ~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 389 (391)
T TIGR01328 346 ASMTHAVVPKEEREAAGITDGMIRLSVGL--EDADDLIADLKQALD 389 (391)
T ss_pred CccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHHh
Confidence 124689999987 334555555555543
No 186
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=5.9e-17 Score=140.63 Aligned_cols=231 Identities=16% Similarity=0.108 Sum_probs=167.5
Q ss_pred chhhhhhccCcc------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCC
Q 024997 7 YQEQTDYFESVD------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFA 75 (259)
Q Consensus 7 ~~~~~~~~g~~~------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~ 75 (259)
+...++..|.++ ....++.+.++..++++|+++.++..+|.||.+.+ ++|+++|+++++|.++..++..
T Consensus 128 w~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~ 207 (405)
T COG0520 128 WQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLP 207 (405)
T ss_pred HHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccC
Confidence 344444456544 23467788899988999999999999999999984 8999999999999988433332
Q ss_pred CCCCCCCCeEEEecccc-ccCCCcceEEEEEecCHHHHHHHHHh---------------------hhhhcCCCCHHHHHH
Q 024997 76 PIPAPADEELMIFTISK-LTGHAGSRFGWAVIKDEAVYQRMSAY---------------------ISLNTMGVSRECQLR 133 (259)
Q Consensus 76 ~~~~~~~~~i~~~S~SK-~~g~~G~R~G~i~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~q~~ 133 (259)
.-.+..+.++++.|..| .+|..| +|++++. +++.+.+... ......+.+.+.+..
T Consensus 208 idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r-~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i 284 (405)
T COG0520 208 IDVQELGCDFLAFSGHKWLLGPTG--IGVLYVR-KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAI 284 (405)
T ss_pred CCchhcCCCEEEEcccccccCCCc--eEEEEEc-hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHH
Confidence 22256788999999999 788778 9999999 6999887331 112234455555544
Q ss_pred H-HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC---CCCeeEEEecCCCchHH
Q 024997 134 A-FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP---PSPAYAWVKCEREEDKD 209 (259)
Q Consensus 134 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 209 (259)
+ .++++...+ --+.+..++.++..+++.+.|++++++.+ +.+ ..+..+.+.++..+...
T Consensus 285 ~l~aAl~~~~~----ig~~~i~~~e~~L~~~~~~~L~~~~~v~i-------------~g~~~~~r~~~vsF~v~~~~~~d 347 (405)
T COG0520 285 GLAAALDYLLE----IGMEAIEAHERELTEYLLEGLSELPGVEI-------------YGPPDADRGGIVSFNVKGIHPHD 347 (405)
T ss_pred hHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHHHhcCCCeEE-------------ecCCcccCceEEEEEeCCCCHHH
Confidence 3 333332211 12566778888888889999998876333 332 24555666677767788
Q ss_pred HHHHHHHcCeeeecCCcccCC-------CCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 210 CYGILKAAKIIGREGKKFRAE-------ARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~~-------~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+...|.++||.++.|.++..+ ...+|+|++. +.++++.+++.|+++.+
T Consensus 348 v~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 348 VATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 888888899999999888731 3459999987 99999999999998753
No 187
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=5.5e-17 Score=140.46 Aligned_cols=242 Identities=11% Similarity=0.123 Sum_probs=152.4
Q ss_pred CCCcc-cchhhh---hhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYP-LYQEQT---DYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~-~~~~~~---~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|.|+ .|.... ...|.++..+. .|++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|.
T Consensus 95 ~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~ 174 (377)
T PRK07671 95 DDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFM 174 (377)
T ss_pred CCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCC
Confidence 36666 443333 33466654333 478889999988999999999999999987 388999999999999983
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCC-cceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHA-GSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~-G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
.+... -+-....++++.|+||.++.+ +.-.|++++.++++.+.+...+.......++...+.+.+ ....
T Consensus 175 ~~~~~-~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~---------~l~t 244 (377)
T PRK07671 175 TPYWQ-SPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLR---------GLKT 244 (377)
T ss_pred ccccC-ChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHc---------CcCh
Confidence 11111 111224479999999999743 355677777657888888877776556666654443332 3346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee---e
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG---R 222 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~---~ 222 (259)
+..++++..++...+.+.|++.+.+.....+..... .++......|-.+.+++. +.+.+.+++++-.+.. .
T Consensus 245 l~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~--~~~~~~~f~~~l~l~~~~~s 322 (377)
T PRK07671 245 LGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG--SEETANKVLERLQYFTLAES 322 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC--CHHHHHHHHHhCCcceEccC
Confidence 777899999999999999999887654444431111 111111122334455663 3455556665554421 1
Q ss_pred cCC------------c----------ccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 223 EGK------------K----------FRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 223 ~g~------------~----------f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
-|. + .+.+++.+|||++- |+.+.+++-|.+.|
T Consensus 323 ~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al 376 (377)
T PRK07671 323 LGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGI--EDGEDLIEDLAQAL 376 (377)
T ss_pred CCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 111 0 11125689999987 33444555555443
No 188
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=5.4e-17 Score=141.27 Aligned_cols=167 Identities=10% Similarity=0.074 Sum_probs=122.4
Q ss_pred CCCcccchh----hhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQE----QTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~----~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+.. .+...|.++..+.. +.+.+++.+++++++|++++|+||+|.+. .++|+++|+++|+|++|-
T Consensus 111 ~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 111 DNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred cCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcc
Confidence 477887664 34445666544432 34678888888999999999999999887 388999999999999982
Q ss_pred CCC-CCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 WPH-FAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~~~-~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.+. ..++ ..+.++++.|+||.++ ..|++.|++++.++++.++++..+...+.+.++.....+.+.+ +
T Consensus 191 ~~~~~~~l--~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l---------~ 259 (394)
T PRK07050 191 AGLAFKPF--EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGL---------P 259 (394)
T ss_pred cccccCHH--HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCC---------C
Confidence 111 1111 2245799999999995 5667899988866789998887777667777776655443333 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQE 178 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 178 (259)
.+..+.++..++...+.+.|++.+.+....
T Consensus 260 tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~ 289 (394)
T PRK07050 260 SLQVRLAAHDRSALEVAEWLKARPEIATVL 289 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 456678888899999999999988765443
No 189
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.77 E-value=2.5e-17 Score=140.92 Aligned_cols=220 Identities=12% Similarity=-0.050 Sum_probs=141.5
Q ss_pred CCcccchh---hhhhccCccc-----ccccChhhhcccCCC-------CceEEEEcCCCCCChhhH--------HHhhcC
Q 024997 2 PFYPLYQE---QTDYFESVDY-----KFEGEANLWGNASSD-------THLVEFVTAPNNPDGQMN--------KAVLKG 58 (259)
Q Consensus 2 P~y~~~~~---~~~~~g~~~~-----~~~~d~~~l~~~~~~-------~~~~i~i~~p~NPtG~~~--------~~la~~ 58 (259)
|+|+.+.. ..+..|.+.. .+.+|+++|++.+++ +++++++++|||| |.++ .++|++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~ 157 (338)
T cd06502 79 TAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKE 157 (338)
T ss_pred CcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHH
Confidence 55554322 2344566542 246888999988853 6899999999998 5442 378889
Q ss_pred CCcEEEeecccc-C---CCCCCCCC-CCCCeEEEeccccccCCCcceEEE-EEecCHHHHHHHHHhhhhh--cCCCCHHH
Q 024997 59 PYAKSIYDHAYF-W---PHFAPIPA-PADEELMIFTISKLTGHAGSRFGW-AVIKDEAVYQRMSAYISLN--TMGVSREC 130 (259)
Q Consensus 59 ~~~~vi~De~y~-~---~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~-i~~~~~~~~~~~~~~~~~~--~~~~~~~~ 130 (259)
+|+++|+||+|. + .....+.. ..+..+++.|+||.+|++| |+ ++++ +++++.+....... +...+++.
T Consensus 158 ~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd06502 158 NGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV---GAVVVGN-RDFIARARRRRKQAGGGMRQSGFL 233 (338)
T ss_pred cCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc---ceEEECC-HHHHHHHHHHHHHhCCChhhHHHH
Confidence 999999999982 1 11112111 1233467889999999887 55 4556 79999888765432 33456677
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHH
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDC 210 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (259)
+.++...++. ..+ .+..+++.++++++.+.|++++. ...++. +.++.+..+.. ....
T Consensus 234 ~~a~~~~L~~------~~~-~~~~~~~~~~~~~l~~~L~~~~~--------------~~~~~~-~~~~~v~~~~~-~~~~ 290 (338)
T cd06502 234 AAAGLAALEN------DLW-LRRLRHDHEMARRLAEALEELGG--------------LESEVQ-TNIVLLDPVEA-NAVF 290 (338)
T ss_pred HHHHHHHhcC------chH-HHHHHHHHHHHHHHHHHHHhcCC--------------Cccccc-CCeEEEecCCc-cHHH
Confidence 7777777762 223 34456777888899999987652 122333 34445554422 2233
Q ss_pred HHHHH------HcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 211 YGILK------AAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 211 ~~ll~------~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
.++++ ++|+.+.+.. .+++|+++.. ++++++++++++++
T Consensus 291 ~~l~~~l~~~~~~gi~~~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 291 VELSKEAIERRGEGVLFYAWG-----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHhhhCCEEEEecC-----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 33332 4798887731 2789999964 88999999998865
No 190
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.77 E-value=3.9e-17 Score=140.64 Aligned_cols=210 Identities=13% Similarity=0.147 Sum_probs=140.3
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccC
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTG 95 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g 95 (259)
|..|++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|+.+.. .-+-.....+++.|+||.++
T Consensus 122 ~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-~~pl~~gaDivv~S~tK~l~ 200 (364)
T PRK07269 122 YANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-QRPIELGADIVLHSATKYLS 200 (364)
T ss_pred ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-CCchhhCCcEEEecCceecc
Confidence 56788999999999999999999999999886 3889999999999999842211 11112234699999999996
Q ss_pred CCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCC
Q 024997 96 HAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRF 174 (259)
Q Consensus 96 ~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 174 (259)
.+| .=.|+++++++++.+.++......+.+.+++..+.+...|+ .+..++++.+++...+.+.|++.+.+
T Consensus 201 g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~---------tL~~r~~~~~~na~~~a~~L~~~p~v 271 (364)
T PRK07269 201 GHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK---------TLSLRMERSTANAQEVVAFLKKSPAV 271 (364)
T ss_pred CCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---------cHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 433 34588888667888888766655556777876666555554 57778889999999999999987743
Q ss_pred ccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc-------------CeeeecCCcc------------cC
Q 024997 175 SLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA-------------KIIGREGKKF------------RA 229 (259)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-------------gi~~~~g~~f------------~~ 229 (259)
.. ..+++.+|++.+. +.. .+...++++.- .+.+.|+..+ +.
T Consensus 272 ~~-----------v~ypg~gg~~sf~-~~~--~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi 337 (364)
T PRK07269 272 KE-----------VLYTGKGGMISFK-VAD--ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGL 337 (364)
T ss_pred cE-----------EeCCCcCcEEEEE-ECC--HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCC
Confidence 21 1224556655444 332 22233333222 2233343221 12
Q ss_pred CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 230 EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 230 ~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.++.+|||++- |+.+++++-|.+.+
T Consensus 338 ~~~liRlsvGl--E~~~dli~dl~~al 362 (364)
T PRK07269 338 TDDLLRLSIGI--EDARDLIADLKQAL 362 (364)
T ss_pred CCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 35789999987 34555555555554
No 191
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.3e-16 Score=138.19 Aligned_cols=207 Identities=11% Similarity=0.084 Sum_probs=140.1
Q ss_pred CCCcccchhhh----hhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQT----DYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~ 70 (259)
+|.|+++...+ ...|.+...+.. +.+.+++.+++++++|++++|+||||.+.. ++|+++|+++|+|++|
T Consensus 107 ~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~- 185 (394)
T PRK09028 107 DSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTW- 185 (394)
T ss_pred CCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCc-
Confidence 46776665433 224544433433 346788888889999999999999999883 8899999999999999
Q ss_pred CCCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
......-+-..+.++++.|.+|.+ |..++..|+++.+ +++.+.+.......+.++++...+.+.+.+ +.
T Consensus 186 a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl---------~T 255 (394)
T PRK09028 186 ASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSPDDVYLAMRGL---------RT 255 (394)
T ss_pred cccccCCccccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHHHHccc---------Cc
Confidence 222111122445689999999999 6778888988777 688888877666667778887666554444 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcC
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAK 218 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 218 (259)
+..++++..++...+.+.|++.+.+.....|..... .++......|-.+.+.++..+.+.+.+++++-.
T Consensus 256 L~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~ 328 (394)
T PRK09028 256 LGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQ 328 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC
Confidence 788899999999999999999987654444432111 011111122334555565323445555665444
No 192
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.76 E-value=4.5e-17 Score=144.52 Aligned_cols=232 Identities=13% Similarity=0.154 Sum_probs=151.9
Q ss_pred CCCcccchhhhhh----ccCccccc-----ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEe-
Q 024997 1 MPFYPLYQEQTDY----FESVDYKF-----EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIY- 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~----~g~~~~~~-----~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~- 65 (259)
+|.|+.|...++. .|.++..+ .+|+++|++.++++++++++++| ||||.+. .++|+++|+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~ 239 (447)
T PRK00451 161 GAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVG 239 (447)
T ss_pred CccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEE
Confidence 4778888887765 35554211 56788899999889999999999 9999997 3899999999988
Q ss_pred -eccccCCCCCCCCCCCCCeEEEe---ccccccCCCcceEEEEEecCHHHHHHHH-------------------------
Q 024997 66 -DHAYFWPHFAPIPAPADEELMIF---TISKLTGHAGSRFGWAVIKDEAVYQRMS------------------------- 116 (259)
Q Consensus 66 -De~y~~~~~~~~~~~~~~~i~~~---S~SK~~g~~G~R~G~i~~~~~~~~~~~~------------------------- 116 (259)
|.+..+ ....+...+.+++++ +|||.+.+.|+|+||++++ +++++.+.
T Consensus 240 ~d~~~~g--~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (447)
T PRK00451 240 VDPVSLG--LLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATR-KKLVRQMPGRLVGETVDADGKRGFVLTLQAREQ 316 (447)
T ss_pred cChHHhc--cCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhh-HHHHhhCCCCEeeeecccCCCeeeEeecccccc
Confidence 543221 111123445566665 7788887889999999998 68888741
Q ss_pred ---HhhhhhcCCCCHHHH-HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC
Q 024997 117 ---AYISLNTMGVSRECQ-LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP 192 (259)
Q Consensus 117 ---~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 192 (259)
........+.+...| .++...+... .+..+++..+++.++++.+.+.|+++++ +...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~aaa~~l~~~----~~~g~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~-- 377 (447)
T PRK00451 317 HIRREKATSNICTNQALNALAAAIYMSLL----GPEGLRELAEQNHQKAHYLAERLAEIGG-------------VELF-- 377 (447)
T ss_pred ccccccccccccccHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHhhcCC-------------EEec--
Confidence 111112223333333 2333333321 3345778889999999999999998764 2222
Q ss_pred CCCeeEE--EecCCCchHHHHHHHHHcCee-eecCCcccC-CCCeEEEEee--cChhhHHHHHHHHHHHh
Q 024997 193 PSPAYAW--VKCEREEDKDCYGILKAAKII-GREGKKFRA-EARFVRLSLL--KSQDDFDLLLHRLDELI 256 (259)
Q Consensus 193 ~~~~~~~--~~~~~~~~~~~~~ll~~~gi~-~~~g~~f~~-~~~~~Ris~~--~~~~~~~~~~~~l~~~l 256 (259)
.+++|.+ ++++....++...++ ++||. ..++..+++ -.+++|+|+. .++++++++++.|++++
T Consensus 378 ~~~~~~~~~v~~~~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 378 DGPFFNEFVVRLPKPAEEVNEALL-EKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCCeEEEEEEecCCCHHHHHHHHH-hcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 3344433 555322345555555 56665 355666653 2478999996 38899999999998875
No 193
>PRK05939 hypothetical protein; Provisional
Probab=99.76 E-value=2.3e-16 Score=137.29 Aligned_cols=240 Identities=13% Similarity=0.125 Sum_probs=149.1
Q ss_pred CCcccchh---hhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCC
Q 024997 2 PFYPLYQE---QTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWP 72 (259)
Q Consensus 2 P~y~~~~~---~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~ 72 (259)
|.|+.+.. .+...|.++..+. .|+++|++.+++++++|++++|+||||.+.. ++|+++|+++|+|++|-.+
T Consensus 94 ~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~ 173 (397)
T PRK05939 94 FLFGNTNSLFGTLRGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSP 173 (397)
T ss_pred CccccHHHHHHHHHhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccc
Confidence 45665443 2344566554333 3678899999999999999999999999873 8899999999999988312
Q ss_pred CCCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHH--------HH-------------HHHH-HhhhhhcCCCCHH
Q 024997 73 HFAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEA--------VY-------------QRMS-AYISLNTMGVSRE 129 (259)
Q Consensus 73 ~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~--------~~-------------~~~~-~~~~~~~~~~~~~ 129 (259)
. .+ +...+.++++.|+||.++..|.++|++++++.. +. ..++ ..........++.
T Consensus 174 ~--~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~ 251 (397)
T PRK05939 174 W--LFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSE 251 (397)
T ss_pred c--ccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHH
Confidence 1 11 123357899999999999899999998875211 11 1111 1122334455665
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc---c-ceeeCCCCCeeEEEecCCC
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT---Y-FKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~ 205 (259)
..+.+.+ .-+.+..+.++..++...+.+.|++.+.+.....|..... . ++......|..+.+.++.
T Consensus 252 ~a~l~~r---------gl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~- 321 (397)
T PRK05939 252 AAHRIAI---------GAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD- 321 (397)
T ss_pred HHHHHHc---------CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC-
Confidence 4443322 3446777888899999999999999997654444431111 0 111122335556666663
Q ss_pred chHHHHHHHHHcCeeeecCCccc--------------------------CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFR--------------------------AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~--------------------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+...++++.-.+.. .+.+++ .+++.+|||++- |+.+++++-|.+.|+
T Consensus 322 -~~~~~~f~~~l~l~~-~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl--Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 322 -GIDCFDFLNRLKLVI-KATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI--EDEADLIADFEQALD 395 (397)
T ss_pred -HHHHHHHHHhCCcce-EccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHh
Confidence 234455555544421 111111 125689999987 345556666655554
No 194
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.76 E-value=5.7e-17 Score=141.79 Aligned_cols=227 Identities=11% Similarity=0.022 Sum_probs=147.6
Q ss_pred CCCcccchhhhhhcc----Cccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFE----SVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g----~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~------~~la~~~~~~vi 64 (259)
+|.|+.+...+...+ .++. .+.+|+++|++.++++++++++++|+ |||.+. .++|+++|+++|
T Consensus 115 ~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~li 193 (398)
T cd00613 115 DSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVY 193 (398)
T ss_pred CccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEE
Confidence 478899988888776 4431 23567888999998889998999885 999886 289999999999
Q ss_pred eeccccCCCCCCCCCCCCCeEEEeccccccCCC----cceEEEEEecCHHHHHHHHHh----------------------
Q 024997 65 YDHAYFWPHFAPIPAPADEELMIFTISKLTGHA----GSRFGWAVIKDEAVYQRMSAY---------------------- 118 (259)
Q Consensus 65 ~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~R~G~i~~~~~~~~~~~~~~---------------------- 118 (259)
+|+++.......-.+..+.+++++|++|.+ .+ |+|+||++.+ +++++.+...
T Consensus 194 vD~~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (398)
T cd00613 194 VDGDNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK-KELVRFLPGRLVGVTKDAEGNRAFRLALQTRE 271 (398)
T ss_pred EEeccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh-hhhHhhCCCCeeccccccCCCcceEEecccch
Confidence 999762111111113446789999999998 45 7999999998 5887764211
Q ss_pred -------hhh-hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee
Q 024997 119 -------ISL-NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI 190 (259)
Q Consensus 119 -------~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 190 (259)
... ...+.+...|.+.. .+... .+..+++.+++++++.+++.+.|++++...
T Consensus 272 ~~~r~e~~~~~~~~~~~~~~~~a~~-~l~~~----~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~--------------- 331 (398)
T cd00613 272 QHIRREKATSNICTGQALLALMAAM-YIVYL----GPEGLKEIAERAHLNANYLAKRLKEVGGVL--------------- 331 (398)
T ss_pred hhcccccccccceecHHHHHHHHHH-HHHHh----CHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---------------
Confidence 000 11112223333333 33321 334567778899999999999998865311
Q ss_pred CCCCCee--EEEecCC---CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHH
Q 024997 191 RPPSPAY--AWVKCER---EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRL 252 (259)
Q Consensus 191 ~~~~~~~--~~~~~~~---~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l 252 (259)
.+.+..+ ++++++. .+.+.+...|.++||.+.... ....+.+|+|+.. ++++++.+++.|
T Consensus 332 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~--~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 332 PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY--LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc--cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 1122222 4566653 223344444556798764321 1235789999854 899999988764
No 195
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.76 E-value=1.8e-16 Score=137.33 Aligned_cols=232 Identities=12% Similarity=0.072 Sum_probs=150.9
Q ss_pred CCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-
Q 024997 2 PFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY- 69 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y- 69 (259)
+.|+.+...++..|.++. ++.+|+++|++.+++++++++++.++||||.+.+ ++|+++|+++++|++|
T Consensus 112 ~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~ 191 (371)
T PRK13520 112 SAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFG 191 (371)
T ss_pred cchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecch
Confidence 456666777776776542 2357889999999877877788889999999983 8899999999999998
Q ss_pred -cC----CCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc--------CCCCHHHHHHHH
Q 024997 70 -FW----PHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT--------MGVSRECQLRAF 135 (259)
Q Consensus 70 -~~----~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~q~~~~ 135 (259)
+. .....+. ...+...+..|..|. +.+|.++|+++..++++++.+........ ...+.....++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~ 270 (371)
T PRK13520 192 GFVIPFLDDPPNFDFSLPGVDSITIDPHKM-GLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATY 270 (371)
T ss_pred hHHHHhhcCCCCccccCCCCceEEECCccc-cCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHH
Confidence 21 1111111 122334556677784 55788999888754678777642111100 001223344455
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 215 (259)
.+++.. .+.-+++.+++..++.+.+.+.|++++ +.+ ...+. ..++.++++ +.+.+...|.
T Consensus 271 ~al~~l----~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~------------~~~~~-~~~v~~~~~--~~~~v~~~L~ 330 (371)
T PRK13520 271 AVMKYL----GREGYRKVVERCMENTRWLAEELKERG-FEP------------VIEPV-LNIVAFDDP--NPDEVREKLR 330 (371)
T ss_pred HHHhhh----cHhHHHHHHHHHHHHHHHHHHHHHhCC-CEE------------ecCCC-ceEEEEecC--CHHHHHHHHH
Confidence 555532 223356677888888999999888763 211 22333 335566665 3455555566
Q ss_pred HcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 216 AAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
++||.++++. .++.+|+|+.. ++++++.+++.|++++.+
T Consensus 331 ~~gi~v~~~~----~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 331 ERGWRVSVTR----CPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred HCCceeccCC----CCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 7799987632 24689999864 889999999999988753
No 196
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.75 E-value=5.5e-17 Score=142.65 Aligned_cols=201 Identities=10% Similarity=-0.005 Sum_probs=129.0
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCC--CCCCCCCCCCeEEEeccccccCCCcce
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPH--FAPIPAPADEELMIFTISKLTGHAGSR 100 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~R 100 (259)
++..++++..-+.-+|.++ .++|+++|+++|+||+| |+.. ...+ ...+....+.++||.++ +|+|
T Consensus 196 ~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~-~~~~~~pDi~~lsK~l~-~G~p 273 (420)
T TIGR00700 196 NNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFAC-EHEGPEPDLITTAKSLA-DGLP 273 (420)
T ss_pred CcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHH-hhcCCCCCEEEeecccc-CCcc
Confidence 3556644443344455554 28999999999999999 4211 1111 11122233567999998 9999
Q ss_pred EEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 101 FGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
+||++++ +++.+.+.......+++.+++.|.++.+.++...+ ++. .+.+++..+++.+.|+.+.. .++
T Consensus 274 ig~v~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~~----~~~~~~~g~~l~~~L~~l~~----~~~ 341 (420)
T TIGR00700 274 LSGVTGR-AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIES---EGL----IERARQIGRLVTDRLTTLKA----VDP 341 (420)
T ss_pred eEEEEec-HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHh---ccH----HHHHHHHHHHHHHHHHHHHh----hCC
Confidence 9999999 79999887655667788999999999888864321 222 23333333344444443221 011
Q ss_pred ccccccceeeCCCCCeeEEEecCCC-----ch---HHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHH
Q 024997 181 PQYCTYFKKIRPPSPAYAWVKCERE-----ED---KDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLH 250 (259)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~ 250 (259)
.+..+.+. |.+.|+.+... +. ..+...+.++||.+.|+..|+ +++||+++ .++++++++++
T Consensus 342 -----~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~---~~lRl~p~l~~~~~~l~~~~~ 412 (420)
T TIGR00700 342 -----RIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFG---NIIRFLPPLTIGDELLSEGLD 412 (420)
T ss_pred -----CEEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCC---CEEEEECCCCcCHHHHHHHHH
Confidence 03334455 66667765211 12 223333457899999987764 79999985 38999999999
Q ss_pred HHHHHhh
Q 024997 251 RLDELIS 257 (259)
Q Consensus 251 ~l~~~l~ 257 (259)
+|.+++.
T Consensus 413 ~l~~~l~ 419 (420)
T TIGR00700 413 ILCAILA 419 (420)
T ss_pred HHHHHhh
Confidence 9999875
No 197
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.75 E-value=2e-16 Score=138.42 Aligned_cols=232 Identities=10% Similarity=-0.029 Sum_probs=155.6
Q ss_pred hhhhhccCccc------ccccChhhhcccCCC----CceEEEEcCCCCCChhhHH-----Hh--hcCCCcEEEeeccccC
Q 024997 9 EQTDYFESVDY------KFEGEANLWGNASSD----THLVEFVTAPNNPDGQMNK-----AV--LKGPYAKSIYDHAYFW 71 (259)
Q Consensus 9 ~~~~~~g~~~~------~~~~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~~-----~l--a~~~~~~vi~De~y~~ 71 (259)
..++..|.++. +..+|+++|++.+++ +++++++++++||||.+++ ++ |+++|+++|+|+++..
T Consensus 101 ~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~ 180 (401)
T PLN02409 101 DQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSI 180 (401)
T ss_pred HHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEccccc
Confidence 44555676552 124678889888854 7899999999999999983 78 9999999999998821
Q ss_pred CCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh---------------hh---cCCCCHHHHH
Q 024997 72 PHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS---------------LN---TMGVSRECQL 132 (259)
Q Consensus 72 ~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~q~ 132 (259)
. ..++. ...+.++++.|.+|.++.+ .++||++++ +++++.+..... .. ...++...+.
T Consensus 181 g-~~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~ 257 (401)
T PLN02409 181 G-ALDFRMDEWGVDVALTGSQKALSLP-TGLGIVCAS-PKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLY 257 (401)
T ss_pred C-CccccccccCccEEEEcCccccCcC-CCcceeEEC-HHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHH
Confidence 1 11221 2345678888889988532 259999999 688887754210 00 1234555666
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-Cc-hHHH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-EE-DKDC 210 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 210 (259)
++.++++... +.-+++.+++++++.+.+.+.|+.++ +.+. .+ .-...++..+++.++. .+ .+..
T Consensus 258 al~~al~~~~----~~G~e~i~~~~~~l~~~l~~~L~~~g-~~~~--~~-------~~~~~s~~v~~~~~p~~~~~~~l~ 323 (401)
T PLN02409 258 GLRAALDLIF----EEGLENVIARHARLGEATRLAVEAWG-LKLC--TK-------KPEWRSDTVTAVVVPEGIDSAEIV 323 (401)
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHcC-Ceec--cC-------ChhhcccceEEEeCCCCCCHHHHH
Confidence 6667776431 22356677888888888888888763 2211 00 0011233445666653 23 3555
Q ss_pred HHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 211 YGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
..+++++||.+.+|..-. ....+||+... +.+++..+++.|.+.|.+
T Consensus 324 ~~l~~~~~i~i~~G~~~~-~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 324 KNAWKKYNLSLGLGLNKV-AGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred HHHHHhCCEEEEcCCCcc-cCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 677788999999877532 35889999865 889999999999988764
No 198
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=1e-16 Score=140.02 Aligned_cols=211 Identities=13% Similarity=0.060 Sum_probs=145.8
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEecc
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTI 90 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~ 90 (259)
|.+.+++.+.++....++..|.+++|.++ .++|+++|+++|+||+| |+.....+. ...+.+..+.||
T Consensus 175 d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~ 254 (408)
T PRK04612 175 DVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTL 254 (408)
T ss_pred CHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEE
Confidence 56778877765556669999999888776 28999999999999999 432221121 123456679999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
||.++ +|+|+||++++ +++.+.+.......+++.+++.+.++.+.|+...+ + ...++++++-+++.+.|++
T Consensus 255 ~K~l~-~G~piga~~~~-~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~----~l~~~~~~~g~~l~~~l~~ 325 (408)
T PRK04612 255 AKALG-GGFPIGAMLAG-PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---P----QIAANVARQSAALRAGLEA 325 (408)
T ss_pred cchhc-CCCceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---c----cHHHHHHHHHHHHHHHHHH
Confidence 99998 89999999999 68888887655556788899999999999986421 1 2355666666666666665
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDF 245 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~ 245 (259)
+.. .. ..+..+...| ...-+.+... ....+.+.+.++||.+.+ .+.+.+|+... .+++++
T Consensus 326 l~~----~~-----~~i~~vrg~G-l~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~-----~g~~~lRl~Ppl~it~eei 390 (408)
T PRK04612 326 LNA----EF-----GVFAQVRGRG-LMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ-----AGPDVLRFVPALNLTDAEL 390 (408)
T ss_pred HHh----hC-----CCeeeeeccc-eEEEEEecCchhhHHHHHHHHHHHCCeEEee-----CCCCEEEEcCCccCCHHHH
Confidence 431 00 0122334443 3334443211 134455566689999976 23478999864 389999
Q ss_pred HHHHHHHHHHhhh
Q 024997 246 DLLLHRLDELISK 258 (259)
Q Consensus 246 ~~~~~~l~~~l~~ 258 (259)
+++++++.+.+.+
T Consensus 391 d~~l~~l~~~l~~ 403 (408)
T PRK04612 391 ADGLARLRLALAD 403 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988753
No 199
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.75 E-value=1.1e-16 Score=136.84 Aligned_cols=217 Identities=13% Similarity=0.125 Sum_probs=149.7
Q ss_pred hccCccccc-ccChhhhcccCCC------CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc----cCCCCCC
Q 024997 13 YFESVDYKF-EGEANLWGNASSD------THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY----FWPHFAP 76 (259)
Q Consensus 13 ~~g~~~~~~-~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y----~~~~~~~ 76 (259)
+.+.+...| ..|++.|++.+.+ +.++|++..--...|.+.+ +++++||+++++||+| +++.+..
T Consensus 142 ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG 221 (388)
T COG0156 142 LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRG 221 (388)
T ss_pred hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCcc
Confidence 344444444 5888999998843 3688888888889999873 8999999999999999 4555444
Q ss_pred CC---C--CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 77 IP---A--PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 77 ~~---~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
+. + ..+.+|+++||||+||..| ||+.++ +.+++.+.+..+. .+.+.+|..-+++...++.. ..
T Consensus 222 ~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~-~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l------~~ 291 (388)
T COG0156 222 LAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS-AALIDYLRNRARPFIFSTALPPAVAAAALAALRIL------EE 291 (388)
T ss_pred HHHHhCCCCccceEEEEEchhhhcccC---ceeeCc-HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH------Hh
Confidence 43 2 2445899999999999999 999999 7999999886543 34555665555666666643 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--CchHHHHHHHHHcCeeeecCCcc
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDKDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~~~~g~~f 227 (259)
....+++++++...+...++..+ +...+...++. .+-+.+ ...+....+++ .||.+.+....
T Consensus 292 ~~~~r~~L~~~~~~~~~~~~~~~--------------~~~~~s~s~I~-pv~~gd~~~a~~~s~~l~~-~Gi~v~~i~~P 355 (388)
T COG0156 292 GPERRERLQELAAFFRSLLKALG--------------LVLLPSESPII-PVILGDEERALEASRALLE-EGIYVSAIRPP 355 (388)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC--------------CccCCCCCCee-eeEeCCHHHHHHHHHHHHH-CCeeEeeecCC
Confidence 34568888888888886666544 22223333333 222222 23455556665 49999875433
Q ss_pred cC--CCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 228 RA--EARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 228 ~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
-. +...+|++++. ++++|+.+++.+.++
T Consensus 356 TVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 356 TVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 33 35689999865 899999999988765
No 200
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.74 E-value=1.3e-15 Score=131.78 Aligned_cols=169 Identities=11% Similarity=0.036 Sum_probs=119.5
Q ss_pred CCCcccchhhh----hhccCcccccccC-hhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQT----DYFESVDYKFEGE-ANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~~~d-~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~ 70 (259)
+|.|+.....+ ...|.++..+..+ .+.+++.+++++++|++++|+||+|.+.. ++|+++|+++|+|++|-
T Consensus 96 ~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 96 DSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred CCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 46666554332 2334444333222 26788888889999999999999999873 88999999999999992
Q ss_pred CCCCCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
.+... -+...+.+++++|++|.++ .+++..|++++. ++.++.+.......+...++..-+...+.++ .
T Consensus 176 ~g~~~-~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~---------t 244 (377)
T TIGR01324 176 AGLLF-KPLEHGVDISIQAGTKYLVGHSDIMIGTVVAN-ARTWDQLREHSYLMGQMVDADDAYTTLRGLR---------T 244 (377)
T ss_pred ccccc-CccccCceEEEecCceeccCCCCceEEEEEeC-HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh---------h
Confidence 11111 1123456899999999995 556888999988 6888877766555566667755444444443 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
+..++++.+++...+.+.|++.+.+.....|
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp 275 (377)
T TIGR01324 245 LGVRLKQHQESSLAIAKWLSEQPEVARVLHP 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcCEEECC
Confidence 6677899999999999999999876544333
No 201
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=5.5e-16 Score=134.12 Aligned_cols=208 Identities=11% Similarity=0.046 Sum_probs=139.5
Q ss_pred CCCcccchhh----hhhccCcccccccC-hhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQ----TDYFESVDYKFEGE-ANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~----~~~~g~~~~~~~~d-~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~ 70 (259)
+|.|+++... ++..|.++..+..+ .+.+++++++++++|++++|+||+|.+.. ++|+++|+++|+|++|-
T Consensus 110 ~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a 189 (395)
T PRK05967 110 DSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWA 189 (395)
T ss_pred cCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCcc
Confidence 4778877653 34456655444433 36688889889999999999999999883 88999999999999982
Q ss_pred CCCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
.+ ...-+...+.++++.|.+|.+ |..++..|+++.. +++.+++.......+.+.++...+.+.+ .-+.
T Consensus 190 ~p-~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~da~l~~r---------gl~T 258 (395)
T PRK05967 190 TP-LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSAN-EKCWPQLLEAHGTLGLCAGPDDTYQILR---------GLRT 258 (395)
T ss_pred Cc-eecChhHcCCCEEEEecccccCCCCCeeEEEEEcC-HHHHHHHHHHHHHcCCCCCHHHHHHHHc---------Cccc
Confidence 11 111112345679999999997 5678889988877 5777777766665667777765443333 3447
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCe
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKI 219 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi 219 (259)
+..++++..++...+.+.|++.+.+.....|..... .++......|-.+.+.++.. +.+.+.+++++-.+
T Consensus 259 l~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l 335 (395)
T PRK05967 259 MGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEI 335 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCc
Confidence 788899999999999999999987754444431111 01111112233456666532 34555666655444
No 202
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.74 E-value=7.8e-17 Score=141.45 Aligned_cols=236 Identities=12% Similarity=0.123 Sum_probs=140.9
Q ss_pred hhhhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCC
Q 024997 8 QEQTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPA 81 (259)
Q Consensus 8 ~~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~ 81 (259)
...+...|.++..+. .|++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+ ....+...
T Consensus 114 ~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~-~~~~~l~~ 192 (418)
T TIGR01326 114 KHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATP-YLCRPIDH 192 (418)
T ss_pred HHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchh-hcCCchhc
Confidence 334455666654332 367889999988899999999999999987 38899999999999998211 11111123
Q ss_pred CCeEEEeccccccCCCcceEEEEEecCHHHHHH--------------------------------HHHhhhhhcCCCCHH
Q 024997 82 DEELMIFTISKLTGHAGSRFGWAVIKDEAVYQR--------------------------------MSAYISLNTMGVSRE 129 (259)
Q Consensus 82 ~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~ 129 (259)
+.++++.|+||.++.+|+|+||++++.+++... ........+...++.
T Consensus 193 g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~ 272 (418)
T TIGR01326 193 GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPF 272 (418)
T ss_pred CCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHH
Confidence 568999999999998999999999863222110 001112223444443
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc----ceeeC-CCCCeeEEEecCC
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY----FKKIR-PPSPAYAWVKCER 204 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~ 204 (259)
..+. ++. .-..+..+.++..++...+.+.|.+.+.+.....|...... ..... ...|-.+.+.++.
T Consensus 273 ~a~~---~~~------~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~~ 343 (418)
T TIGR01326 273 NAFL---LLQ------GLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIKG 343 (418)
T ss_pred HHHH---HHC------CcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEecC
Confidence 2222 222 23355556677778889999999998877655544421111 11111 1234345556653
Q ss_pred CchHHHHHHHHHcCeeee---cCC------------c----------ccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 205 EEDKDCYGILKAAKIIGR---EGK------------K----------FRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~---~g~------------~----------f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+.+.+.++++.-.+... -|. + .+.+++.+|||++- |+.+++++-|.+.|
T Consensus 344 -~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~Al 417 (418)
T TIGR01326 344 -GREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVGI--ENIDDIIADLEQAL 417 (418)
T ss_pred -CHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHhh
Confidence 23444555554444221 111 0 01125689999987 34555555555544
No 203
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.74 E-value=3.3e-16 Score=135.78 Aligned_cols=229 Identities=11% Similarity=0.069 Sum_probs=146.9
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++++..+++++|+||||.+. .++|+++|+++++|++|
T Consensus 113 ~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~ 192 (373)
T TIGR03812 113 ESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAF 192 (373)
T ss_pred CcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCc
Confidence 3667777777887787652 345788999998877665556666899999987 38899999999999999
Q ss_pred c---CC---CCC---CCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcC-------C-CCHHHH
Q 024997 70 F---WP---HFA---PIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM-------G-VSRECQ 131 (259)
Q Consensus 70 ~---~~---~~~---~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~-------~-~~~~~q 131 (259)
- .+ ... .+. ....-..+..|.+| ++.++.+.|+++..++++++.+......... + .+....
T Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~ 271 (373)
T TIGR03812 193 GGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASA 271 (373)
T ss_pred hhHHHHHHhcCCCCCCccccCCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHH
Confidence 2 00 000 111 11122445567789 5667788886664336888776421111110 1 123344
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCY 211 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (259)
.++...++.. ....+++..++..++++.+.+.|++++. .....+ ...++.+.++. .+.+.
T Consensus 272 ~~~~~~l~~l----~~~g~~~~~~~~~~~~~~l~~~L~~~g~-------------~~~~~~-~~~~v~~~~~~--~~~v~ 331 (373)
T TIGR03812 272 AATYAVIKYL----GREGYRKIVAECMENTRYLVEELKKIGF-------------EPVIEP-VLNIVAFEVDD--PEEVR 331 (373)
T ss_pred HHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------eEEcCC-CceEEEEEeCC--HHHHH
Confidence 4455555532 2334567788899999999999987652 111122 23455565553 33455
Q ss_pred HHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 212 GILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
+.|.++||.++++. .++++|+|+.. ++++++.+++.|++
T Consensus 332 ~~L~~~gi~v~~~~----~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 332 KKLRDRGWYVSVTR----CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred HHHHHCCceeccCC----CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 55667899987642 34789999974 88999999999876
No 204
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.3e-16 Score=140.00 Aligned_cols=200 Identities=11% Similarity=0.094 Sum_probs=127.9
Q ss_pred hhhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCC
Q 024997 9 EQTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPAD 82 (259)
Q Consensus 9 ~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~ 82 (259)
..++..|.++..+. .|++++++.+++++++|++++|+||||.++ .++|+++|+++|+|++|- ......+...+
T Consensus 122 ~~~~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a-~~~~~~pl~~g 200 (431)
T PRK08248 122 HTLPKLGITVKFVDPSDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFA-SPYLLRPIEHG 200 (431)
T ss_pred HHHHhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCC-ccccCChhHcC
Confidence 34445666654333 367889999988899999999999999998 388999999999999872 11111112346
Q ss_pred CeEEEeccccccCCCcceEEEEEecCHHH---------------------------------HHHHHHhhhhhcCCCCHH
Q 024997 83 EELMIFTISKLTGHAGSRFGWAVIKDEAV---------------------------------YQRMSAYISLNTMGVSRE 129 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~G~i~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~ 129 (259)
.++++.|++|.+|.+|.++|++++...+. ...........+...++.
T Consensus 201 aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~ 280 (431)
T PRK08248 201 ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPF 280 (431)
T ss_pred CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHH
Confidence 78999999999999999999988742211 011112223344556665
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc----ceeeC-CCCCeeEEEecCC
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY----FKKIR-PPSPAYAWVKCER 204 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~ 204 (259)
..+.+.+ .-+.+..+.++.+++...+.+.|++++.+.....|+..... ..... ...|-.+.+.++.
T Consensus 281 ~a~l~~r---------gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~ 351 (431)
T PRK08248 281 NSFLLLQ---------GLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKG 351 (431)
T ss_pred HHHHHhc---------CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC
Confidence 4443333 33467778999999999999999999987644444321111 11111 1224455666654
Q ss_pred CchHHHHHHHHHcCe
Q 024997 205 EEDKDCYGILKAAKI 219 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi 219 (259)
+.+.+.++++.-.+
T Consensus 352 -~~~~~~~f~~~l~l 365 (431)
T PRK08248 352 -GVEAGKKLIDSVKL 365 (431)
T ss_pred -CHHHHHHHHHhCCc
Confidence 23445555554444
No 205
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.74 E-value=2.3e-16 Score=136.09 Aligned_cols=236 Identities=14% Similarity=0.085 Sum_probs=145.0
Q ss_pred CCcccc----hhhhhhccCccc----ccccChhhhcccCCCCceEEE-EcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPLY----QEQTDYFESVDY----KFEGEANLWGNASSDTHLVEF-VTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~~----~~~~~~~g~~~~----~~~~d~~~l~~~~~~~~~~i~-i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|.|+.| .....+.|..+. .+.+|++++++++++++++++ +++||||+|.+. .++|+++|+++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~ 186 (363)
T TIGR01437 107 GHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDA 186 (363)
T ss_pred ccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEEC
Confidence 556655 355566676552 356889999999998888655 678999999876 489999999999999
Q ss_pred cccCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc--CCCCHHHHHHHHHHHHHHHhcC
Q 024997 68 AYFWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT--MGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 68 ~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
+| ....... ...+.++++.|++|.+ .|++.|+++.+ +++++.+........ .........+..++++...+ .
T Consensus 187 a~-~~~~~~~-~~~g~D~~~~S~~K~l--~gp~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~-~ 260 (363)
T TIGR01437 187 AA-EEDLQKY-YRLGADLVIYSGAKAI--EGPTSGLVLGK-KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS-T 260 (363)
T ss_pred CC-CCchHHH-HHcCCCEEEEeCCccc--CCCceEEEEEc-HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc-c
Confidence 88 2111110 1123478889999977 57789999988 688887654322110 01111222333334443211 1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC--CCchHHHHHHHHHcC--eee
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE--REEDKDCYGILKAAK--IIG 221 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~g--i~~ 221 (259)
.. +..+.+.++++.+.+.|++++++.+....+... ...+ .+-+.++.. ..+.+.+.+.|++++ |.+
T Consensus 261 ~~----~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~----~~~~--~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~ 330 (363)
T TIGR01437 261 GK----ESGAEMVAKLTPFIEALNTLKGVSASIVQDEAG----RDIA--RAEIRFDESELGMTAADVVQALRQGEPAIYT 330 (363)
T ss_pred Cc----ccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCC----CcCc--eEEEEEeccCCCCCHHHHHHHHhcCCCCEEE
Confidence 22 234445566777888898877644321111000 0000 011223332 235667777777777 666
Q ss_pred ecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHh
Q 024997 222 REGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l 256 (259)
++ + ..+.+.+|+++.. ++++++.+.++|++++
T Consensus 331 r~--~-~~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 331 RG--Y-KANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred ee--e-eecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 65 3 3346889999876 8999999999998864
No 206
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.73 E-value=1.3e-16 Score=141.44 Aligned_cols=203 Identities=11% Similarity=0.103 Sum_probs=132.3
Q ss_pred CCceEEEEcCCCCCChhh-H---------HHhhcCCCcEEEeeccc--cCCC--CCCCCCCCCCeEEEeccccccCCCcc
Q 024997 34 DTHLVEFVTAPNNPDGQM-N---------KAVLKGPYAKSIYDHAY--FWPH--FAPIPAPADEELMIFTISKLTGHAGS 99 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~-~---------~~la~~~~~~vi~De~y--~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~ 99 (259)
++..+-+|..|-+.+|.+ + .++|+++|+++|+||+| |+.. ...+. ..+..-.+.|+||.++ +|+
T Consensus 217 ~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~-~~~v~pDi~t~sK~l~-~G~ 294 (451)
T PRK06918 217 PETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIE-HFDVVPDLITVSKSLG-AGV 294 (451)
T ss_pred CCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhH-hcCCCCCEEeeehhhc-CCC
Confidence 333444777887766443 3 28999999999999999 4211 11111 1111112669999998 999
Q ss_pred eEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 024997 100 RFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEI 179 (259)
Q Consensus 100 R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 179 (259)
|+||++++ +++.+.+.......+++.+++.|.++.+.++...++ .. .+.+++..+.+.+.|+.+.. ..
T Consensus 295 pig~v~~~-~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~---~~----~~~~~~~g~~l~~~l~~l~~----~~ 362 (451)
T PRK06918 295 PISGVIGR-KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKE---NL----NDRAIELGKVVMNRFEEMKN----KY 362 (451)
T ss_pred ccEEEEEc-HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHC---CH----HHHHHHHHHHHHHHHHHHHh----hC
Confidence 99999999 799998876556678899999999988888754222 21 23334444444444443320 00
Q ss_pred cccccccceeeCCCCCeeEEEecCC-----Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHH
Q 024997 180 APQYCTYFKKIRPPSPAYAWVKCER-----EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLL 249 (259)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~ 249 (259)
+ .+..+.+.|+++.|....+ .+ .+.+...+.++||.+.|+..|+ +++||+++ .+++++++++
T Consensus 363 ~-----~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~---~~lrl~p~l~~t~~~id~~l 434 (451)
T PRK06918 363 N-----CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYG---NVIRVLMPLVITDEQLEEGL 434 (451)
T ss_pred C-----CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCC---CEEEEECCCccCHHHHHHHH
Confidence 0 1334566777777765421 12 2233444467899999976553 78999985 4899999999
Q ss_pred HHHHHHhhh
Q 024997 250 HRLDELISK 258 (259)
Q Consensus 250 ~~l~~~l~~ 258 (259)
++|.+++++
T Consensus 435 ~~l~~~l~~ 443 (451)
T PRK06918 435 TIIEESLQA 443 (451)
T ss_pred HHHHHHHHH
Confidence 999988753
No 207
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.73 E-value=2.1e-16 Score=138.06 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=139.1
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEecc
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTI 90 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~ 90 (259)
.|++.+++.+.+++++|++..++++.|... .++|+++|+++|+||+| |+....... ...+...-+-|+
T Consensus 167 ~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~ 246 (397)
T TIGR03246 167 NDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTS 246 (397)
T ss_pred CCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEe
Confidence 477889888877788866664445555442 28999999999999998 421111111 111111224489
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
||.+| .|+++||++++ +++.+.+.......+.+.+++.+.++.+.++... . .+..++++++.+++.+.|++
T Consensus 247 ~K~lg-gG~pigav~~~-~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~----~~l~~~~~~~~~~l~~~L~~ 317 (397)
T TIGR03246 247 AKALG-GGFPIGAMLTT-TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---T----PELLAGVKQRHDLFVDGLEK 317 (397)
T ss_pred ehhhh-CCcceeEEEEc-HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---h----ccHHHHHHHHHHHHHHHHHH
Confidence 99998 79999999999 6999888655444567788999999888887531 1 23467788888888888876
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCC---CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDF 245 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~ 245 (259)
+.. .. ..+......+.+ +.+.+.. .....+...|.++|+.+.+. +.+++|++. ..+++++
T Consensus 318 l~~----~~-----~~~~~vrg~G~~-~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~~lR~~p~~~~t~~~i 382 (397)
T TIGR03246 318 INA----RY-----NVFSEIRGKGLL-IGAVLTEAYQGKAKQFVNAAAEEGVIALIA-----GPNVVRFAPSLVISDDDI 382 (397)
T ss_pred HHh----cC-----CCeEeeecCceE-EEEEEcCchhhHHHHHHHHHHHCCeEEeec-----CCCEEEEeCCCCCCHHHH
Confidence 541 00 012233333333 3333322 12233444455689998762 347899964 4599999
Q ss_pred HHHHHHHHHHhhh
Q 024997 246 DLLLHRLDELISK 258 (259)
Q Consensus 246 ~~~~~~l~~~l~~ 258 (259)
++++++|.+++.+
T Consensus 383 ~~~~~~l~~~l~~ 395 (397)
T TIGR03246 383 DEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998763
No 208
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.73 E-value=3.6e-16 Score=135.49 Aligned_cols=229 Identities=13% Similarity=0.111 Sum_probs=144.6
Q ss_pred ccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEE
Q 024997 14 FESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMI 87 (259)
Q Consensus 14 ~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~ 87 (259)
.|.++..+. .|++++++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-.+ ....+.....++++
T Consensus 112 ~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~-~~~~p~~~gaDivv 190 (380)
T PRK06176 112 NGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATP-YYQNPLLLGADIVV 190 (380)
T ss_pred cCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccc-ccCCccccCCCEEE
Confidence 454443222 467889998988999999999999999998 38999999999999998211 11111123457999
Q ss_pred eccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSK 166 (259)
Q Consensus 88 ~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (259)
.|++|.++.+| .-.|+++..++++.+.+...+.......++...+.... .-..+..++++..++...+.+
T Consensus 191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~---------gl~tl~~R~~~~~~~a~~la~ 261 (380)
T PRK06176 191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR---------GIKTLGLRMEAHQKNALCVAE 261 (380)
T ss_pred ecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHh---------ccCcHHHHHHHHHHHHHHHHH
Confidence 99999997554 55677887556788878776665555556654443322 334567778888999999999
Q ss_pred HHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc--------------
Q 024997 167 IISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR-------------- 228 (259)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~-------------- 228 (259)
.|+..+.+.....+..... .++......|..+.++++. .+.+.++++.-.+.. .+.+++
T Consensus 262 ~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~--~~~~~~f~~~l~~~~-~~~s~G~~~sl~~~p~~~~~ 338 (380)
T PRK06176 262 FLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN--DSEAVAFVESLKLFI-LGESLGGVESLVGIPAFMTH 338 (380)
T ss_pred HHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcCCcce-EccCCCCCCceeeCCccccc
Confidence 9999887654333331111 1222222344556667753 345556665544421 111111
Q ss_pred ------------CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 ------------AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+++.+|||++- |+.+++++-|.+.|+
T Consensus 339 ~~~~~~~~~~~gi~~~liR~svGl--E~~~dli~dl~~Al~ 377 (380)
T PRK06176 339 ACIPKEQREAAGIRDGLVRLSVGI--EHEQDLLEDLEQAFA 377 (380)
T ss_pred ccCCHHHHHhcCCCcCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 125689999987 334445555555443
No 209
>PLN02509 cystathionine beta-lyase
Probab=99.73 E-value=6.5e-16 Score=136.19 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=150.3
Q ss_pred CCCcccchhhh----hhccCccccc-ccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQT----DYFESVDYKF-EGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~-~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~ 70 (259)
+|.|+.+...+ ...|.++..+ ..|++++++.+++++++|++++|+||+|.+.. ++|+++|+++|+|++|.
T Consensus 178 ~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a 257 (464)
T PLN02509 178 DDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIM 257 (464)
T ss_pred CCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 36777765333 3446654322 34678899999889999999999999999873 88999999999999983
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCC-CcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGH-AGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
.+.. ..+...+.+++++|++|.++. .++-.|++++.++.+.+.+...+.......++...+.+...++ .
T Consensus 258 ~~~~-~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~---------t 327 (464)
T PLN02509 258 SPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIK---------T 327 (464)
T ss_pred cccc-CChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhh---------h
Confidence 2211 111123457999999999864 3345688887545666666555544444556665444444444 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc----cee-eCCCCCeeEEEecCCCchHHHHHHHHHcCee---e
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY----FKK-IRPPSPAYAWVKCEREEDKDCYGILKAAKII---G 221 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---~ 221 (259)
+..++++.+++...+.+.|++.+.+.....|+...+. ++. ...-||++ .+.+. +.+...++++.-.+. +
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~-sf~~~--~~~~~~~f~~~l~l~~~a~ 404 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVF-SFITG--SVALSKHLVETTKYFSIAV 404 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEE-EEEeC--CHHHHHHHHHcCCcceEcc
Confidence 6778999999999999999999876544444321111 111 11224444 33553 344455555544431 1
Q ss_pred ecCC------------cc----------cCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 222 REGK------------KF----------RAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 222 ~~g~------------~f----------~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.-|. +. +.+++.+|||++- |+.+++++-|.+.|+
T Consensus 405 slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl--E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 405 SFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFR 460 (464)
T ss_pred cCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHc
Confidence 1121 11 1125789999987 345555555555553
No 210
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.73 E-value=7.6e-17 Score=142.11 Aligned_cols=207 Identities=14% Similarity=0.130 Sum_probs=136.4
Q ss_pred ChhhhcccCC---CCceEEEEc-CCCCCChhhH---------HHhhcCCCcEEEeeccc--c--CCCCC-CCCCCCCCeE
Q 024997 24 EANLWGNASS---DTHLVEFVT-APNNPDGQMN---------KAVLKGPYAKSIYDHAY--F--WPHFA-PIPAPADEEL 85 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~-~p~NPtG~~~---------~~la~~~~~~vi~De~y--~--~~~~~-~~~~~~~~~i 85 (259)
|+++|++.+. ++++++++. .|+| +|.+. .++|+++|+++|+||+| | +..+. ...+..+ .
T Consensus 181 d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~p-D- 257 (423)
T TIGR00713 181 DLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEP-D- 257 (423)
T ss_pred CHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCc-c-
Confidence 6778888774 466776664 7888 67665 28899999999999999 3 11111 0112111 1
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHH---hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA---YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
+.||||.++ +|+|+||++++ +++.+.+.. .....+++.+++.|.++.+.++... ..++.+...+..+..++
T Consensus 258 -i~t~sK~l~-~G~pig~v~~~-~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~~~~ 331 (423)
T TIGR00713 258 -LTTLGKIIG-GGLPVGAFGGR-REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD---EEGVYTELDELAKRLAE 331 (423)
T ss_pred -hhhhhhhhc-CCCceeeeeEH-HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHHH
Confidence 448999998 99999999999 799998864 2234567899999999999988642 22355556666666666
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCe-eEEEecCCC---------ch----HHHHHHHHHcCeeeecCCccc
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPA-YAWVKCERE---------ED----KDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~----~~~~~ll~~~gi~~~~g~~f~ 228 (259)
.+.+.+++++. .......+++ .+++..+.. +. .+...++ ++||.+.++ .|
T Consensus 332 ~l~~~~~~~~~-------------~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-~~- 395 (423)
T TIGR00713 332 GLSEVLEDTGI-------------PHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPS-QF- 395 (423)
T ss_pred HHHHHHHhcCC-------------CeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecC-Cc-
Confidence 66666665431 1111233443 333432210 11 2334444 689998653 22
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+|++...+++++++++++|.+++++
T Consensus 396 ---~~~~l~~~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 396 ---EACFLSAAHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ---cceeeECCCCHHHHHHHHHHHHHHHhh
Confidence 457999877999999999999998864
No 211
>PRK05968 hypothetical protein; Provisional
Probab=99.73 E-value=7.2e-16 Score=134.14 Aligned_cols=218 Identities=11% Similarity=0.004 Sum_probs=137.9
Q ss_pred hhhhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCC-CCCCCCCC
Q 024997 9 EQTDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPH-FAPIPAPA 81 (259)
Q Consensus 9 ~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~-~~~~~~~~ 81 (259)
..+...|.++..+. .|++++++.+ +++++|++++|+||++.+.. ++|+++|+++|+|++|..+. ..++ ..
T Consensus 121 ~~~~~~G~~v~~vd~~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~--~~ 197 (389)
T PRK05968 121 TILKRMGVEVDYVDGRDEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI--TL 197 (389)
T ss_pred HHHHHcCceEEEeCCCCHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch--hc
Confidence 34444566654332 3678888887 56889999999999998873 88999999999999982111 1112 12
Q ss_pred CCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhh-hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 024997 82 DEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYIS-LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKK 159 (259)
Q Consensus 82 ~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (259)
+.++++.|+||.++.+| ++.|+++.+ ++++++++.... ......+++.++.+...++ .+..+.++..+
T Consensus 198 g~Divv~S~tK~l~g~~~~~gG~i~~~-~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~---------tl~~r~~~~~~ 267 (389)
T PRK05968 198 GVDLVIHSASKYLGGHSDTVAGVVAGS-KEHIARINAEAYPYLGAKLSPFEAWLLLRGLR---------TLPLRMKAHEA 267 (389)
T ss_pred CCcEEEeeccccccCCCCeEEEEEEEC-HHHHHHHHHHHHHhCCCCCChHHHHHHHcccC---------cHHHHHHHHHH
Confidence 34688999999997644 688999988 688888876543 2345567766665544444 45667778888
Q ss_pred HHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCccc----------
Q 024997 160 RWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFR---------- 228 (259)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~---------- 228 (259)
+...+.+.|++++.+.....+....+. +......+..+.++++.. +...+...|+..++.+.-|..+.
T Consensus 268 ~a~~la~~L~~~p~v~~v~~p~l~~~~-~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~ 346 (389)
T PRK05968 268 SALEIARRLKAHPVVERVCHPALANHP-PAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQ 346 (389)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCh-HHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCccccc
Confidence 899999999988865433322210000 000011232444555422 33445555555666655553332
Q ss_pred ------------CCCCeEEEEeec
Q 024997 229 ------------AEARFVRLSLLK 240 (259)
Q Consensus 229 ------------~~~~~~Ris~~~ 240 (259)
.+++.+|+|++-
T Consensus 347 ~~~~~~~~~~~gi~~~liR~SvGl 370 (389)
T PRK05968 347 QKAQPNSAARFGVSPRSVRLHVGL 370 (389)
T ss_pred ccCCHHHHHhcCCCCCeEEEEecc
Confidence 125789999987
No 212
>PLN02624 ornithine-delta-aminotransferase
Probab=99.73 E-value=1.1e-16 Score=142.34 Aligned_cols=214 Identities=12% Similarity=0.068 Sum_probs=137.1
Q ss_pred ChhhhcccCC---CCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEe
Q 024997 24 EANLWGNASS---DTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~ 88 (259)
|++.|++.+. +++++|++..++||+|.+++ ++|+++|+++|+||+| |+.....+. +..+...-+.
T Consensus 210 d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv 289 (474)
T PLN02624 210 DLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVV 289 (474)
T ss_pred CHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEE
Confidence 5677877773 46788899999999998872 8899999999999999 322111111 1111112245
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
++||.+|..++++|+++++ +++++.+.......+.+.+++.+.++.+.++...+ .+ ..+...++.+.+.+.|
T Consensus 290 ~lsK~lggG~~pigav~~~-~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~---~~----l~~~~~~~~~~l~~~L 361 (474)
T PLN02624 290 ILGKALGGGVIPVSAVLAD-KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD---EK----LAERSAKLGQELRDQL 361 (474)
T ss_pred EecccccCCCCcceeeeec-HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh---ch----HHHHHHHHHHHHHHHH
Confidence 5799999666999999998 68888876555555668899999999999875311 11 2334444445555555
Q ss_pred HhcCCCccccccccccccceeeCCCCCeeE-EEecCC--C-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecCh
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRPPSPAYA-WVKCER--E-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQ 242 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~ 242 (259)
+.+.. .++. .+....+.+.++. +++.+. . ....+.+.|.++||.+.|+ +.+.+||++ ..++
T Consensus 362 ~~l~~----~~~~----~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~-----~~~~lR~~p~l~~t~ 428 (474)
T PLN02624 362 QKIQK----QFPK----LIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT-----HDTIIRLAPPLSISE 428 (474)
T ss_pred HHHHH----hCCC----ceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecC-----CCCEEEEECCccCCH
Confidence 44320 0110 0222334444433 232221 1 1223334456789999874 357899996 4599
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
+++++++++|.+++.+
T Consensus 429 e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 429 DELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 213
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.72 E-value=4.1e-16 Score=135.37 Aligned_cols=218 Identities=15% Similarity=0.028 Sum_probs=139.0
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~ 94 (259)
+.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|+|+++ ++.....+ ...+.++++.|++|.+
T Consensus 123 ~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~-~~~~~D~~~~s~~K~l 201 (376)
T TIGR01977 123 GLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDM-TELAIDMLAFTGHKGL 201 (376)
T ss_pred CCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCc-hhcCCCEEEecccccc
Confidence 457889999999888999999999999999983 8899999999999998 22111111 2345689999999987
Q ss_pred C-CCcceEEEEEecCHHHHHHHHHh----------------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 024997 95 G-HAGSRFGWAVIKDEAVYQRMSAY----------------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTM 157 (259)
Q Consensus 95 g-~~G~R~G~i~~~~~~~~~~~~~~----------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (259)
+ ..| .|.++..++..+..+... .+.....++.....+...+++...+. -.+..+++.
T Consensus 202 ~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~----g~~~~~~~~ 275 (376)
T TIGR01977 202 LGPQG--TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKI----GIANIAKKE 275 (376)
T ss_pred cCCCC--ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHh----CHHHHHHHH
Confidence 5 345 677766532211111110 00001123333334444455533111 234456777
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc-CeeeecCCcccC-------
Q 024997 158 KKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA-KIIGREGKKFRA------- 229 (259)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gi~~~~g~~f~~------- 229 (259)
++..+.+.+.|++++++.+.. + ......+..+++.++..+.+.+.+.|.+. ||.+.+|..+..
T Consensus 276 ~~l~~~~~~~l~~~~~~~~~~--~-------~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g 346 (376)
T TIGR01977 276 CMLTEKLLNGLREINKVKIYG--P-------ADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIG 346 (376)
T ss_pred HHHHHHHHHHHhcCCCeEEeC--C-------CCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhC
Confidence 888888888888766432211 0 00111234556666655555566666555 999999876642
Q ss_pred --CCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 230 --EARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 230 --~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
..+.+|+|+.. +.++++.++++|++
T Consensus 347 ~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 347 TFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 35789999865 89999999999875
No 214
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=6.6e-16 Score=135.53 Aligned_cols=148 Identities=10% Similarity=0.096 Sum_probs=104.7
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCCC
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGHA 97 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 97 (259)
.|++++++.+++++++|++++|+||||.++ .++|+++|+++|+|++|-.+. ..-+-....++++.|+||.++.+
T Consensus 131 ~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~-~~~p~~~gaDivv~S~tK~l~G~ 209 (425)
T PRK06084 131 DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPV-LCRPFEHGADIVVHSLTKYIGGH 209 (425)
T ss_pred CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc-cCChhhcCCCEEEECchhccccc
Confidence 478889999988899999999999999998 388999999999999982111 11111234579999999999889
Q ss_pred cceEEEEEecCHHHH------------------------------HHH----HHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 98 GSRFGWAVIKDEAVY------------------------------QRM----SAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 98 G~R~G~i~~~~~~~~------------------------------~~~----~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
|.++|.+++....+. ... .......+...++...+.+.+-
T Consensus 210 g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrg------ 283 (425)
T PRK06084 210 GTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQG------ 283 (425)
T ss_pred ccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcC------
Confidence 999998777421210 000 0112233455666544433333
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
-+.+..+.++.+++...+.+.|++++.+.....|
T Consensus 284 ---l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 317 (425)
T PRK06084 284 ---LETLALRMERHTENALKVARYLQQHPQVAWVKYA 317 (425)
T ss_pred ---cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 3467788999999999999999999987644444
No 215
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=9.2e-16 Score=134.81 Aligned_cols=209 Identities=12% Similarity=0.015 Sum_probs=140.7
Q ss_pred hhhhcccCC-----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCC--CCC--CCCCCe
Q 024997 25 ANLWGNASS-----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFA--PIP--APADEE 84 (259)
Q Consensus 25 ~~~l~~~~~-----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~--~~~--~~~~~~ 84 (259)
++.+++.+. ++..++++...+++.|... .++|+++|+++|+||+| |+.... ... +..+ +
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~p-D 261 (421)
T PRK06777 183 LSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKP-D 261 (421)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCC-C
Confidence 344665552 3456655554467777543 28999999999999999 422111 111 1111 2
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+-++||.++ .|+|+||++++ +++++.+.......+++.+++.|.++.+.|+... . +...++++++.+++
T Consensus 262 --iv~~sK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~---~----~~l~~~~~~~g~~l 330 (421)
T PRK06777 262 --LITMAKSLG-GGMPISAVVGR-AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIA---E----EKLCQRALILGAHL 330 (421)
T ss_pred --EEeeehhhc-CCCceEEEEEc-HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHH---h----ccHHHHHHHHHHHH
Confidence 348999998 99999999999 7999988766566778899999999999998541 1 23466777777777
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEE-EecCCC---chHH---HHHHHHHcCeeeecCCcccCCCCeEEEE
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAW-VKCERE---EDKD---CYGILKAAKIIGREGKKFRAEARFVRLS 237 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~---~~~ll~~~gi~~~~g~~f~~~~~~~Ris 237 (259)
.+.|+++.. .. ..+..+.+.|.++.+ +..+.. +.++ +...+.++||.+.|+..|+ +++||+
T Consensus 331 ~~~L~~l~~----~~-----~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g---~~lr~~ 398 (421)
T PRK06777 331 VEVLEKAKA----SC-----PAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHG---NVIRFL 398 (421)
T ss_pred HHHHHHHHH----hC-----CCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCC---CEEEEe
Confidence 777776531 00 114455677777654 332211 1222 2233456899999976554 689999
Q ss_pred ee--cChhhHHHHHHHHHHHhh
Q 024997 238 LL--KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 238 ~~--~~~~~~~~~~~~l~~~l~ 257 (259)
+. .+++++++++++|.+++.
T Consensus 399 ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 399 YPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh
Confidence 84 499999999999998874
No 216
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.70 E-value=3.2e-15 Score=131.54 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=143.9
Q ss_pred cccChhhhcccCCC-CceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-CCC---CCCCCCCCCCeEEEecccc
Q 024997 21 FEGEANLWGNASSD-THLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-WPH---FAPIPAPADEELMIFTISK 92 (259)
Q Consensus 21 ~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-~~~---~~~~~~~~~~~i~~~S~SK 92 (259)
+.+|+++|++.+++ +++++++++++||+..-+ .++|+++|+++|+|++|+ +.. ..... ....+++++|+||
T Consensus 150 ~~~d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~-~~~~di~~~S~~K 228 (416)
T PRK00011 150 GLIDYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSP-VPHADVVTTTTHK 228 (416)
T ss_pred CCcCHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCC-CCCCcEEEecCCc
Confidence 57889999998854 788888887777754333 488999999999999983 110 01111 1134688999999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHH-HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc
Q 024997 93 LTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRE-CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS 171 (259)
Q Consensus 93 ~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (259)
.+ +|.|.||++++++++++.+.........+.+.. .+.++..++... ....+.+.+++++++++.+.+.|+++
T Consensus 229 ~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~ 302 (416)
T PRK00011 229 TL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA----LEPEFKEYAQQVVKNAKALAEALAER 302 (416)
T ss_pred CC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHH----HhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 76 688889999975688888877654433332222 333322233221 12346777889999999999999875
Q ss_pred CCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCC-ccc----CCCCeEEEEe-----
Q 024997 172 NRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGK-KFR----AEARFVRLSL----- 238 (259)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~-~f~----~~~~~~Ris~----- 238 (259)
+ ++... ...+.++|+.+... +.+.+.+.|+++||.+..+. .+. ..+..+|++.
T Consensus 303 g--------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~ 368 (416)
T PRK00011 303 G--------------FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITT 368 (416)
T ss_pred C--------------CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhh
Confidence 4 22221 12347888888533 45667777888999997432 121 1245789964
Q ss_pred -ecChhhHHHHHHHHHHHhhh
Q 024997 239 -LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 -~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.++++.+++.|++++..
T Consensus 369 ~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 369 RGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred cCcCHHHHHHHHHHHHHHHhc
Confidence 22688999999999988654
No 217
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.70 E-value=5.2e-16 Score=136.39 Aligned_cols=206 Identities=10% Similarity=0.023 Sum_probs=135.0
Q ss_pred hhhcccCC-----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCC--CCC---CCCCCe
Q 024997 26 NLWGNASS-----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFA--PIP---APADEE 84 (259)
Q Consensus 26 ~~l~~~~~-----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~--~~~---~~~~~~ 84 (259)
+.+++.+. ++.+++++...++|+|... .++|+++|+++|+||+| |+.... ... ..+|
T Consensus 184 ~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD-- 261 (421)
T PRK09792 184 DAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD-- 261 (421)
T ss_pred HHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc--
Confidence 55666653 3566755555589999765 28999999999999998 422211 111 1222
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+.||||.++ +|+|+||++++ +++.+.+.......+++.+++.++++.+.++...+ .++++ ++++..+++
T Consensus 262 --i~t~gK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~~~~----~~~~~g~~l 330 (421)
T PRK09792 262 --LMTMAKSLA-GGMPLSGVVGN-ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK---ESLCE----RANQLGQRL 330 (421)
T ss_pred --EEEeehhhc-CCCceEEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---hhHHH----HHHHHHHHH
Confidence 789999998 89999999999 79998876555556788999999987777765422 23333 333333344
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCC-CeeEEEecCCC--------chHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPS-PAYAWVKCERE--------EDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
.+.|+.+. ..++ . ...+.| |.++|+.+.+. ..+.+...+.++||.+.+. +...+.+|
T Consensus 331 ~~~l~~l~----~~~p------~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g~~~~~ir 396 (421)
T PRK09792 331 KNTLIDAK----ESVP------A-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---GAYGNVIR 396 (421)
T ss_pred HHHHHHHH----HhCC------C-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---CCCCCEEE
Confidence 44443321 0011 0 124455 88999988643 1233444445689998531 22247899
Q ss_pred EEeec--ChhhHHHHHHHHHHHhhh
Q 024997 236 LSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 236 is~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|.+.. ++++++++++++.+.+++
T Consensus 397 l~P~l~i~~~ei~~~~~~l~~~l~~ 421 (421)
T PRK09792 397 FLYPLTIPDAQFDAAMKILQDALSD 421 (421)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHhC
Confidence 99754 899999999999998753
No 218
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.70 E-value=1.3e-16 Score=136.84 Aligned_cols=211 Identities=11% Similarity=0.039 Sum_probs=140.3
Q ss_pred CCcccchhhhhhccCccc------ccccChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCcEEE
Q 024997 2 PFYPLYQEQTDYFESVDY------KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSI 64 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi 64 (259)
|+|+.+...++..|.++. ...+|+++|++.+++ +++++++++|+||||.+. .++|+++|++++
T Consensus 103 ~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~ 182 (345)
T cd06450 103 QAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLH 182 (345)
T ss_pred cchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEE
Confidence 566667777776666542 236888999998865 788889999999999997 389999999999
Q ss_pred eeccccC---C--CCCC-CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 65 YDHAYFW---P--HFAP-IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 65 ~De~y~~---~--~~~~-~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
+|++|.. + .... .....+.+.+..|++|.++ ++.++|+++.. .+.+.++...+
T Consensus 183 vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~--------------------~~~~~~~l~~l 241 (345)
T cd06450 183 VDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR--------------------ALKLWATLRRF 241 (345)
T ss_pred EechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH--------------------HHHHHHHHHHH
Confidence 9999821 1 1111 1112234667889999775 66677776643 44444555555
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-----CchHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-----EEDKDCYGI 213 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l 213 (259)
.. ..+++.+++..++++.+.+.|++++++.+ ...++.+++.|. ++. .+...+.+.
T Consensus 242 ~~-------~g~~~~~~~~~~~~~~l~~~L~~~~~~~~------------~~~~~~~iv~f~-~~~~~~~~~~~~~i~~~ 301 (345)
T cd06450 242 GR-------DGYGEHIDRIVDLAKYLAELIRADPGFEL------------LGEPNLSLVCFR-LKPSVKLDELNYDLSDR 301 (345)
T ss_pred hH-------HHHHHHHHHHHHHHHHHHHHHhcCCCeEE------------ecCCceeEEEEE-ECCcchhhHHHHHHHHH
Confidence 42 24566778888899999998887664221 113445554443 332 233445555
Q ss_pred HHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHH
Q 024997 214 LKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDE 254 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~ 254 (259)
|.++|+.+.++..+. .++++|++++. +.++++.+++.|++
T Consensus 302 L~~~g~~~~~~~~~~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 302 LNERGGWHVPATTLG-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHhcCCEEEEeeEEC-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 667766666655444 45799999963 77999999998875
No 219
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.70 E-value=1.2e-15 Score=132.16 Aligned_cols=205 Identities=16% Similarity=0.096 Sum_probs=128.1
Q ss_pred ccChhhhcccCC------CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc----CCCCCCCC---CCCCC
Q 024997 22 EGEANLWGNASS------DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF----WPHFAPIP---APADE 83 (259)
Q Consensus 22 ~~d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~----~~~~~~~~---~~~~~ 83 (259)
..|++.|++.++ +.+.++++++++|++|.+.+ ++|+++|+++++||+|- ......+. +..+.
T Consensus 124 ~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~ 203 (370)
T PRK05937 124 HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENF 203 (370)
T ss_pred CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCC
Confidence 367888888774 34667778999999999983 89999999999999992 11221111 12233
Q ss_pred eEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh--hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 84 ELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS--LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 84 ~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
.+.+.|+||.+|..| +.++.. +++.+.+..... ....+.+++...++.++++...+ .....++++++++
T Consensus 204 ~~~~~tlsK~~g~~G---~~vl~~-~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~-----~~~~~~~~l~~l~ 274 (370)
T PRK05937 204 YAVLVTYSKALGSMG---AALLSS-SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQ-----EGELARKQLFRLK 274 (370)
T ss_pred cEEEEechhhhhcCc---eEEEcC-HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHH
Confidence 467899999999878 334555 466665543211 12344566665555555553211 1123456667777
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK- 240 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~- 240 (259)
+++.+.|+... + +.. .-+.++....+.+.+.|.++||.+.. .+.+..+.+|+|+..
T Consensus 275 ~~l~~~l~~~~-------------------~-~~~-~~i~~~~~~~~~~~~~L~~~gi~v~~--~~~~~~~~iRis~~~~ 331 (370)
T PRK05937 275 EYFAQKFSSAA-------------------P-GCV-QPIFLPGISEQELYSKLVETGIRVGV--VCFPTGPFLRVNLHAF 331 (370)
T ss_pred HHHHHhcCCCC-------------------C-CCE-EEEEeCChhHHHHHHHHHHCCeeEEe--eCCCCCCEEEEEcCCC
Confidence 76666654211 0 000 01223333345667777788998863 223335689999974
Q ss_pred -ChhhHHHHHHHHHHHhhh
Q 024997 241 -SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 -~~~~~~~~~~~l~~~l~~ 258 (259)
++++++.+++.|++++++
T Consensus 332 ~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 332 NTEDEVDILVSVLATYLEK 350 (370)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 999999999999988753
No 220
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=1.9e-15 Score=132.07 Aligned_cols=233 Identities=9% Similarity=0.012 Sum_probs=143.6
Q ss_pred hhhccCcccc--cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCC
Q 024997 11 TDYFESVDYK--FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADE 83 (259)
Q Consensus 11 ~~~~g~~~~~--~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~ 83 (259)
....|.++.- +.+|++.+++++++++++|++.+|+||++.+. .++|+++|+++|+|++| ..+...-+-...-
T Consensus 121 l~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~-~tP~~~~pl~~GA 199 (432)
T PRK06702 121 LRKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTL-ATPYLCQAFEHGA 199 (432)
T ss_pred HHHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCC-CchhhCChhhcCC
Confidence 3445766533 34678899999999999999999999999887 38999999999999988 2111111113445
Q ss_pred eEEEecccc-----ccCCCcceE-----EEEEecCHHHHH----------------------HHHHhhhhhcCCCCHHHH
Q 024997 84 ELMIFTISK-----LTGHAGSRF-----GWAVIKDEAVYQ----------------------RMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 84 ~i~~~S~SK-----~~g~~G~R~-----G~i~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~q 131 (259)
+|++.|+|| ..++.|+++ +|...++.++.+ .........+.+.+++..
T Consensus 200 DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a 279 (432)
T PRK06702 200 NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNA 279 (432)
T ss_pred CEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHH
Confidence 799999999 555667666 455443222221 111223334568888877
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc-c---ceeeC-CCCCeeEEEecCCCc
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT-Y---FKKIR-PPSPAYAWVKCEREE 206 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~~~ 206 (259)
+.+.+.|+ .+..+.++.+++...+.+.|++.+.+.....|+.... . ++... ...|-.+.+.++. +
T Consensus 280 ~l~~rgL~---------Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~-~ 349 (432)
T PRK06702 280 YISNIGLE---------TLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKG-G 349 (432)
T ss_pred HHHHhccC---------cHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-C
Confidence 76666665 5667788889999999999999987654444432111 0 11111 1123445666653 3
Q ss_pred hHHHHHHHHHcCee---eecC----------C--c----------ccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 207 DKDCYGILKAAKII---GREG----------K--K----------FRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 207 ~~~~~~ll~~~gi~---~~~g----------~--~----------f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.+.+.+++++-.+. +.-| + + .+.+.+.+|||++- |+.+++++-|.+.|
T Consensus 350 ~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl--Ed~eDLi~Dl~~Al 422 (432)
T PRK06702 350 LEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI--EDVSDIIADLEAAL 422 (432)
T ss_pred HHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHH
Confidence 44455555544332 1111 1 0 01125689999987 34444555555444
No 221
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.69 E-value=8.7e-16 Score=134.51 Aligned_cols=216 Identities=13% Similarity=0.084 Sum_probs=137.7
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~ 94 (259)
+.+|++.|++.++++++++++++|+||||.+.+ ++|+++|+++++|+++- +.....+ .....++++.|..|.+
T Consensus 128 ~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~-~~~~~D~~~~s~~K~~ 206 (402)
T TIGR02006 128 GLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINV-NELKVDLMSISGHKIY 206 (402)
T ss_pred CcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCc-cccCCCEEEEehhhhc
Confidence 457888999999888999999999999999983 89999999999999982 2111122 2335678899999998
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhhh------hhcCCCCHHHH-HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVYQRMSAYIS------LNTMGVSRECQ-LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~~~~~~~~~------~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
|.+| +|++++.+ +....+..... ....+.+++.+ .+....++.. ...+....++.++.++.+.+.
T Consensus 207 gp~G--~G~l~~~~-~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-----~~~~~~~~~~~~~l~~~l~~~ 278 (402)
T TIGR02006 207 GPKG--IGALYVRR-KPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-----KEEMAQDTAHVLALRDRLLNG 278 (402)
T ss_pred CCCc--eEEEEEcc-CCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHH
Confidence 8668 89988873 43332221110 11223333333 3344555532 224566677888888888888
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC------------------
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA------------------ 229 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~------------------ 229 (259)
|+.++++.+.. + .....+....+.+...+.+.+...+ .++.++.|..+..
T Consensus 279 l~~~~~v~~~~--~--------~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~ 346 (402)
T TIGR02006 279 IKSIEEVYLNG--D--------LEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDEL 346 (402)
T ss_pred HhcCCCEEEeC--C--------ccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhh
Confidence 88766432211 0 0111111011222322333333333 5898888876642
Q ss_pred CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 230 EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 230 ~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
..+.+|+|++. +.++++.+++.|+++++
T Consensus 347 ~~~~vR~S~~~~~t~edid~l~~~l~~~~~ 376 (402)
T TIGR02006 347 AHSSIRFTIGRFTTEEEIDYAVKLVKSAID 376 (402)
T ss_pred cCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 13789999976 88999999999988764
No 222
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.69 E-value=5.5e-15 Score=128.79 Aligned_cols=209 Identities=13% Similarity=0.079 Sum_probs=133.1
Q ss_pred CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-c---CCCCCC------CCCCCCCeEEEeccccccCCCcc
Q 024997 35 THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-F---WPHFAP------IPAPADEELMIFTISKLTGHAGS 99 (259)
Q Consensus 35 ~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~---~~~~~~------~~~~~~~~i~~~S~SK~~g~~G~ 99 (259)
++++|++.+|+||+|.+.+ ++|+++|+++|+||+| + +..... +....+.++++.|+||.+|..|
T Consensus 138 ~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g- 216 (392)
T PLN03227 138 QRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG- 216 (392)
T ss_pred CcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC-
Confidence 5788899999999999973 8999999999999999 3 111111 1112345899999999987555
Q ss_pred eEEEEEecCHHHHHHHHHhhhhhcCCC--CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc-
Q 024997 100 RFGWAVIKDEAVYQRMSAYISLNTMGV--SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL- 176 (259)
Q Consensus 100 R~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 176 (259)
|+++++ +++++.+.......+.+. ++..+.++...+... . . ..+.+++++++.+++.+.|++.. +..
T Consensus 217 --g~v~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~----~-~-~~~~~~~l~~~~~~l~~~L~~~~-~~~~ 286 (392)
T PLN03227 217 --GMTVGS-EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGE----L-A-GPQLLNRLHDSIANLYSTLTNSS-HPYA 286 (392)
T ss_pred --cEEecC-HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH----h-c-CHHHHHHHHHHHHHHHHHHHhcC-Cccc
Confidence 999888 799888765544333343 366677776666532 1 1 23467788899999999887522 110
Q ss_pred ccccccccccceeeCCCCCeeEEEecCCCc----------hHHHHHHHHHcCeeeecCC-c----cc-CCCCeEEEEeec
Q 024997 177 QEIAPQYCTYFKKIRPPSPAYAWVKCEREE----------DKDCYGILKAAKIIGREGK-K----FR-AEARFVRLSLLK 240 (259)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~~~~g~-~----f~-~~~~~~Ris~~~ 240 (259)
..... + ........+..+.+.+.+.. ...+.+.+.++|+.+.+.. . +. .++..+|+++..
T Consensus 287 ~~~rg-~---~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~ 362 (392)
T PLN03227 287 LKLRN-R---LVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANA 362 (392)
T ss_pred ccccc-c---cccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecC
Confidence 00000 0 00011122334445553310 1244455557899887521 1 11 246789999965
Q ss_pred --ChhhHHHHHHHHHHHhhh
Q 024997 241 --SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 --~~~~~~~~~~~l~~~l~~ 258 (259)
++++++++++.|++++++
T Consensus 363 ~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 363 SHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 999999999999998763
No 223
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.69 E-value=2.8e-15 Score=130.60 Aligned_cols=225 Identities=10% Similarity=0.050 Sum_probs=137.8
Q ss_pred hhhhccCccc--------ccccChhhhcccCC-------CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc
Q 024997 10 QTDYFESVDY--------KFEGEANLWGNASS-------DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY 69 (259)
Q Consensus 10 ~~~~~g~~~~--------~~~~d~~~l~~~~~-------~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y 69 (259)
.++..|.++. .+.+|++.+++.++ ++++++++++|+||||.+.+ ++|+++|+++++|++|
T Consensus 118 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~ 197 (387)
T PRK09331 118 AAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAY 197 (387)
T ss_pred HHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCc
Confidence 3555666542 24578888988774 36899999999999999973 8999999999999998
Q ss_pred cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh--------cCCCCHHHHHHHHHHHHH
Q 024997 70 FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN--------TMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 70 ~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~q~~~~~~l~~ 140 (259)
..+. .++. ...+.+++++|++|.++ .+.++||++++ +++++.+.+..... ....+.....++...++.
T Consensus 198 ~~g~-~~~~~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~ 274 (387)
T PRK09331 198 TVGR-MPVDGKKLGADFIVGSGHKSMA-ASAPSGVLATT-EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH 274 (387)
T ss_pred ccCC-cCCCHHHcCCCEEEeeCccccc-CCCCEEEEEEC-HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHH
Confidence 3111 1121 23356899999999997 55689999999 68888775542211 111111112222333332
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chHHHH
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDKDCY 211 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 211 (259)
. .+..+ ..++..++.+.+.+.|++++++.+.. + .+....++.++.+.. ....+.
T Consensus 275 ~-----~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~--~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (387)
T PRK09331 275 V-----VERVK-RWDEEVKKARWFVDELEKIEGFKQLG--E---------KPRNHDLMKFETPSFDEIAKKHKRRGFFLY 337 (387)
T ss_pred H-----HHHHH-HHHHHHHHHHHHHHHHhcCCCEEEec--c---------CcCcCCeEEEeCCchhHHhhhccccchhHH
Confidence 1 11222 34445667778888888775433211 0 011222333333311 123355
Q ss_pred HHHHHcCeeeecCCcccCCCCeEEEEe-ecChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRAEARFVRLSL-LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.|+++||...+ ......+|+.. +.++++++.+++.|++++++
T Consensus 338 ~~L~~~gI~~~~----~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 338 EELKKRGIHGIK----PGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred HHHHHcCceEEc----cCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 566678997432 11235577776 44999999999999988653
No 224
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=2.8e-15 Score=131.31 Aligned_cols=206 Identities=13% Similarity=0.036 Sum_probs=138.1
Q ss_pred ChhhhcccCC---CCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCCCC--C--CCCCCCeE
Q 024997 24 EANLWGNASS---DTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHFAP--I--PAPADEEL 85 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~~~--~--~~~~~~~i 85 (259)
|++.|++.+. ++..++++..+++++|.+.+ ++|+++|+++|+||+| |+..... . .+..+ .
T Consensus 172 d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~-d- 249 (401)
T TIGR01885 172 NLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKP-D- 249 (401)
T ss_pred CHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCC-C-
Confidence 6777887763 45677777778999998772 7899999999999998 3221111 1 11122 2
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
+.++||.++..|+|+|+++++ +++++.+.......+.+.+++.+.++.+.++...+ + ...++.++..+.+.
T Consensus 250 -i~~~gK~l~~g~~~ig~v~~~-~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~---~----~l~~~~~~~~~~~~ 320 (401)
T TIGR01885 250 -IVLLGKALSGGVYPVSAVLAD-DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE---E----KLAENAEKLGEIFR 320 (401)
T ss_pred -EEEeeccccCCCCCcEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---c----cHHHHHHHHHHHHH
Confidence 235789998666999999999 79998886533444667789999999999885411 1 13456666678888
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeE-EEecCC--CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--c
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYA-WVKCER--EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--K 240 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~ 240 (259)
+.|++++. ..+....+.+.++. +++.+. .....+...|.++||.+.|+ +++.+||+.. .
T Consensus 321 ~~L~~l~~-----------~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~-----~~~~lRi~p~l~~ 384 (401)
T TIGR01885 321 DQLKKLPK-----------PIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT-----HGNIIRLAPPLVI 384 (401)
T ss_pred HHHHhccC-----------CceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec-----CCCEEEEeCCccC
Confidence 88876531 11223344555544 233221 12333444455789999773 2478999974 4
Q ss_pred ChhhHHHHHHHHHHHh
Q 024997 241 SQDDFDLLLHRLDELI 256 (259)
Q Consensus 241 ~~~~~~~~~~~l~~~l 256 (259)
+++++++++++|.+++
T Consensus 385 t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 385 TEEQLDEGLEIIKKVI 400 (401)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998876
No 225
>PRK14012 cysteine desulfurase; Provisional
Probab=99.67 E-value=4.3e-15 Score=130.26 Aligned_cols=216 Identities=13% Similarity=0.088 Sum_probs=133.4
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~ 94 (259)
+.+|++.|++.++++++++++++++||||.+++ ++|+++|+++|+|+++- +.....+ ...+..+++.|++|.+
T Consensus 130 g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~~~~D~~~~s~~K~~ 208 (404)
T PRK14012 130 GIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDL-SKLKVDLMSFSAHKIY 208 (404)
T ss_pred CcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCc-ccCCCCEEEEehhhcc
Confidence 457889999999889999999999999999984 88999999999999882 2111122 2234578888999988
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhhh------hhcCCCCHHHH-HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVYQRMSAYIS------LNTMGVSRECQ-LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~~~~~~~~~------~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
|.. ++|++++++ +....+..... ....+.+...+ .+..++++.. .....+..++.++.++.+.+.
T Consensus 209 gp~--g~G~l~~~~-~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-----~~~~~~~~~~~~~l~~~l~~~ 280 (404)
T PRK14012 209 GPK--GIGALYVRR-KPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-----KEEMATENERIRALRDRLWNG 280 (404)
T ss_pred CCC--ceEEEEEec-CCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHH
Confidence 743 599998884 43322222100 01122222222 2222344321 123444567777777888888
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC------------------
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA------------------ 229 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~------------------ 229 (259)
|++++++.+. .. . .......+++++.... .+.+...| .++.+..|..|.+
T Consensus 281 L~~~~~i~~~--~~-----~-~~~~~~~~~~~~~~~~--~~~~~~~l--~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (404)
T PRK14012 281 IKDIEEVYLN--GD-----L-EQRVPGNLNVSFNYVE--GESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDEL 348 (404)
T ss_pred HhcCCCEEEe--CC-----c-cccCCCEEEEEEeCcC--HHHHHHhC--CCeEEEchhhhCCCCCCCCHHHHHcCCChhh
Confidence 8766543221 00 0 0011223345555432 23333334 3777777765532
Q ss_pred CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 230 EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 230 ~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
..+.+|+|+.. ++++++.+++.|+++++
T Consensus 349 ~~~~iRls~~~~~t~~dvd~~~~~l~~~~~ 378 (404)
T PRK14012 349 AHSSIRFSLGRFTTEEEIDYAIELVRKSIG 378 (404)
T ss_pred cCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 14789999976 88999999999998765
No 226
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.65 E-value=6.4e-16 Score=133.08 Aligned_cols=203 Identities=12% Similarity=0.026 Sum_probs=131.8
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~ 94 (259)
+.+|+++|++.++++++++++++|+||||.+++ ++|+++|+++++|+++ ++.....+ ...+.++++.|.+|.+
T Consensus 124 ~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~-~~~~~D~~~~s~~K~~ 202 (353)
T TIGR03235 124 GRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDL-SADRIDLISCSGHKIY 202 (353)
T ss_pred CcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccc-cccCCCEEEeehhhcC
Confidence 457889999999888999999999999999983 8899999999999987 32211122 2345678889999998
Q ss_pred CCCcceEEEEEecCHHHHHH--HHHhh------hhhcCC-CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVYQR--MSAYI------SLNTMG-VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~~~--~~~~~------~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
|.+| +|++++.+ +.... +.... .....+ ++.....+..++++.. ....++..++++++.+.+.
T Consensus 203 gp~g--~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~-----~~~~~~~~~~~~~l~~~l~ 274 (353)
T TIGR03235 203 GPKG--IGALVIRK-RGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIA-----RRNAQAWEVKLRAMRNQLR 274 (353)
T ss_pred CCCc--eEEEEEcc-CcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHH
Confidence 8777 89999884 54322 11100 001112 2333334444455432 1234566788888888888
Q ss_pred HHHHhcCCCccccccccccccceeeCC---CCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCC---CCeEEEEee
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRP---PSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAE---ARFVRLSLL 239 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~---~~~~Ris~~ 239 (259)
+.|++ .++. ...+ .....+.+.++..+.+.+...|++ +|.+++|..|..+ +.++|.+++
T Consensus 275 ~~l~~-~g~~-------------~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g 339 (353)
T TIGR03235 275 DALQT-LGVK-------------LNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMG 339 (353)
T ss_pred HHhcc-CCeE-------------EeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcC
Confidence 88876 3322 2211 112233444455556777777764 9999999999753 347888887
Q ss_pred cChhhHHH
Q 024997 240 KSQDDFDL 247 (259)
Q Consensus 240 ~~~~~~~~ 247 (259)
.+++++..
T Consensus 340 ~~~~~~~~ 347 (353)
T TIGR03235 340 LDTDRARG 347 (353)
T ss_pred CCHHHhCc
Confidence 76655443
No 227
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.65 E-value=6.8e-15 Score=128.77 Aligned_cols=205 Identities=14% Similarity=0.077 Sum_probs=131.5
Q ss_pred ccChhhhcccCC---CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-c---CCCCCCCC----CCCCCeE
Q 024997 22 EGEANLWGNASS---DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-F---WPHFAPIP----APADEEL 85 (259)
Q Consensus 22 ~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~---~~~~~~~~----~~~~~~i 85 (259)
..|++.|++.+. .+.++|++..-.++.|.+.+ ++|+++|+++|+||+| + ++...... -..+.+|
T Consensus 233 HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~i 312 (476)
T PLN02955 233 HCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDL 312 (476)
T ss_pred CCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcE
Confidence 468888888772 34566565556799998873 8999999999999999 2 33322221 2357789
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh--cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN--TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
+++||||++|..| ||++++ +++++.+.+..... +.+.+++.-.++.+.++... . -..++++++++.++
T Consensus 313 i~~TLsKA~G~~G---Gfi~gs-~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~---~---~~~~r~~L~~n~~~ 382 (476)
T PLN02955 313 CVGTLSKAAGCHG---GFIACS-KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR---K---EKWRRKAIWERVKE 382 (476)
T ss_pred EEEeCccchhccC---ceeecH-HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHh---c---CHHHHHHHHHHHHH
Confidence 9999999998888 999999 79999888755432 22333444444545554321 1 12356677777777
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeec
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLK 240 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~ 240 (259)
+.+.+ + +. ..++++ .+.+... ....+.+.|.++||.+.+...... +...+||+++.
T Consensus 383 fr~~~---G--------------~~---~~sPI~-pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA 441 (476)
T PLN02955 383 FKALS---G--------------VD---ISSPII-SLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSA 441 (476)
T ss_pred HHHhc---C--------------CC---CCCCEE-EEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCC
Confidence 76631 1 11 112222 2222222 223344455578999987543333 34579999954
Q ss_pred --ChhhHHHHHHHHHHHhh
Q 024997 241 --SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 241 --~~~~~~~~~~~l~~~l~ 257 (259)
++++++.+++.|.++..
T Consensus 442 ~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 442 AHTTEDVKKLITALSSCLD 460 (476)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 99999999999987653
No 228
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=1.7e-14 Score=127.37 Aligned_cols=197 Identities=13% Similarity=0.070 Sum_probs=127.0
Q ss_pred CCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCCC--CC--CCCCCCeEEEeccccccCCCc
Q 024997 34 DTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHFA--PI--PAPADEELMIFTISKLTGHAG 98 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~~--~~--~~~~~~~i~~~S~SK~~g~~G 98 (259)
++++++++..-+||+|.+++ ++|+++|+++|+||+| |+.... .. .+..+. +-++||.++ +|
T Consensus 203 ~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pD---iitlsK~l~-~G 278 (443)
T PRK08360 203 EGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPD---IITLGKPLG-GG 278 (443)
T ss_pred CCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCC---EEEeccccc-CC
Confidence 46777555544699998872 7899999999999999 422111 11 122222 237899999 99
Q ss_pred ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQE 178 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 178 (259)
+|+||++++ +++.+.+.......+.+.+++.|.++.+.++...+ ++. .++++++-+++.+.|+++.. .
T Consensus 279 ~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~---~~l----~~~~~~~g~~l~~~L~~l~~----~ 346 (443)
T PRK08360 279 LPISATIGR-AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE---KNL----LKRAEKLGNYTKKRLEEMKK----K 346 (443)
T ss_pred ceeEEEEEc-HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCH----HHHHHHHHHHHHHHHHHHHH----h
Confidence 999999999 79999887655556788899999999999986522 223 44555555555555554320 0
Q ss_pred ccccccccceeeCCCCCeeEEEecCC------Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHH
Q 024997 179 IAPQYCTYFKKIRPPSPAYAWVKCER------EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDL 247 (259)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~ 247 (259)
. ..+..+... |..+-+.+.. .+ ...+...+.++||.+.+. ..+.+|++. ..+++++++
T Consensus 347 ~-----~~v~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lr~~P~l~~t~~~id~ 415 (443)
T PRK08360 347 H-----ELIGDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF-----SGNVLRIQPPLTIEKEVLDE 415 (443)
T ss_pred C-----CCeeeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec-----CCCEEEEeCCCCCCHHHHHH
Confidence 0 002223333 3333333321 01 123444455789988652 237899965 449999999
Q ss_pred HHHHHHHHhh
Q 024997 248 LLHRLDELIS 257 (259)
Q Consensus 248 ~~~~l~~~l~ 257 (259)
+++++.+.++
T Consensus 416 ~~~~l~~~l~ 425 (443)
T PRK08360 416 GLDILEEAIE 425 (443)
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 229
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.64 E-value=6e-15 Score=127.31 Aligned_cols=221 Identities=14% Similarity=0.178 Sum_probs=140.6
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCC-cEEEeeccccCCCCCCCCCCCCCeEEEecccccc-C
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPY-AKSIYDHAYFWPHFAPIPAPADEELMIFTISKLT-G 95 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~-~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~-g 95 (259)
-|.++|++++++++++|++.+|+||+..+. .++|+++| +++|+|+.+- .....-+-..+.++++.|.||.+ |
T Consensus 128 ~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~a-tp~~~~pL~~GaDivv~S~TKyl~G 206 (386)
T PF01053_consen 128 TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFA-TPYNQNPLELGADIVVHSATKYLSG 206 (386)
T ss_dssp TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTT-HTTTC-GGGGT-SEEEEETTTTTTT
T ss_pred hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccc-ceeeeccCcCCceEEEeeccccccC
Confidence 367889999999999999999999999998 38999998 9999999882 11111111234689999999999 4
Q ss_pred CCcceEEEEEecC-HHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCC
Q 024997 96 HAGSRFGWAVIKD-EAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRF 174 (259)
Q Consensus 96 ~~G~R~G~i~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 174 (259)
...+-.|.+++.+ +++.+.++......+...++..-+.+.+-++ .+..+.++..++...+.+.|++.+.+
T Consensus 207 hsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---------Tl~~R~~~~~~nA~~lA~~L~~hp~V 277 (386)
T PF01053_consen 207 HSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR---------TLPLRMERQNENAEALAEFLEEHPKV 277 (386)
T ss_dssp SSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT---------THHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred CcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC---------cHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5666678888775 5888888887777777777776665555554 67778999999999999999999876
Q ss_pred ccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc----------------------
Q 024997 175 SLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR---------------------- 228 (259)
Q Consensus 175 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~---------------------- 228 (259)
.....|....+ .++.....+|-.+.+.++.. .+.+..+++.-.+.. .|.++|
T Consensus 278 ~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~-~~~~~~f~~~l~l~~-~~~SlGg~~SLi~~p~~~~h~~~~~e~~ 355 (386)
T PF01053_consen 278 KRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG-EEAARRFLDALKLFS-IAPSLGGVESLISHPASTSHRSLSPEER 355 (386)
T ss_dssp EEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH-HHHHHHHHHH-SSSE-ESSS-SSSS-EEEETTCTTTTTSCHHHH
T ss_pred CeEEEcccccccceeeeeecccccCceeEEEeccc-hhhhHhHHhhhhhHh-hhhhcCCcccccccccchhhccCChhhh
Confidence 54443321111 01222223333666777653 245666666555421 121121
Q ss_pred ----CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 ----AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ----~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
..++.+|+|++- |+.+++++-|.+.|+
T Consensus 356 ~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 356 AEAGISDGLIRLSVGL--EDPDDLIADLEQALE 386 (386)
T ss_dssp HHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred hccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence 125789999987 555666666666653
No 230
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=4.6e-14 Score=124.11 Aligned_cols=234 Identities=13% Similarity=0.114 Sum_probs=141.5
Q ss_pred hhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCe
Q 024997 11 TDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEE 84 (259)
Q Consensus 11 ~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~ 84 (259)
+...|..+..+. .|++.+++.+++++++|++++|+||||.+. .++|+++|+++|+|+++..+. ...+...+.+
T Consensus 123 ~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~-~~~pl~~gaD 201 (427)
T PRK05994 123 FKSFGWQVRWADADDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPY-LIRPIEHGAD 201 (427)
T ss_pred HHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccc-cCCccccCCc
Confidence 344555543333 367889999988999999999999999997 388999999999999983111 1111123557
Q ss_pred EEEeccccccCCCcceEEEEEecCHH-----------------------HHHHHH----------HhhhhhcCCCCHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEA-----------------------VYQRMS----------AYISLNTMGVSRECQ 131 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~-----------------------~~~~~~----------~~~~~~~~~~~~~~q 131 (259)
+++.|++|.+|.+|-.+|.+++.... +.+.+. ......+...++...
T Consensus 202 ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A 281 (427)
T PRK05994 202 IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNA 281 (427)
T ss_pred EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHH
Confidence 99999999998777666755542111 221111 112233445566544
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc-c---ceee-CCCCCeeEEEecCCCc
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT-Y---FKKI-RPPSPAYAWVKCEREE 206 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~~~-~~~~~~~~~~~~~~~~ 206 (259)
+.+..- -+.+..+.++.+++...+.+.|++.+.+.....|+.... + +... ....|-.+.++++. +
T Consensus 282 ~l~~~~---------l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~-~ 351 (427)
T PRK05994 282 FLILTG---------IETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKG-G 351 (427)
T ss_pred HHHHcC---------cccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecC-C
Confidence 433333 346777899999999999999999998765555542121 1 1111 12234455666653 3
Q ss_pred hHHHHHHHHHcCee---eecCCc----------------------ccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 207 DKDCYGILKAAKII---GREGKK----------------------FRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 207 ~~~~~~ll~~~gi~---~~~g~~----------------------f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.+...++++.-.+. +..|.. .+.+++.+|||++- |+.+++++-|.+.|+
T Consensus 352 ~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--E~~~dli~dl~~Al~ 425 (427)
T PRK05994 352 YEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI--EDVDDIIADLEQALA 425 (427)
T ss_pred HHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence 45555666554442 222211 01124689999987 344555555555554
No 231
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1.6e-14 Score=127.57 Aligned_cols=200 Identities=11% Similarity=0.022 Sum_probs=127.9
Q ss_pred CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceE
Q 024997 35 THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRF 101 (259)
Q Consensus 35 ~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~ 101 (259)
+..+ ++..| ..-.|.+. .++|++||+++|+||+| |+.....+. ...+....+.|+||.+| .|+++
T Consensus 207 ~~aa-vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg-~G~pi 284 (433)
T PRK08117 207 EVAA-VIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIA-SGLPL 284 (433)
T ss_pred cEEE-EEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhcc-CCCcc
Confidence 4556 55555 44455554 28999999999999999 432221211 11122223579999998 89999
Q ss_pred EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 024997 102 GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAP 181 (259)
Q Consensus 102 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 181 (259)
|+++++ +++.+.+.......+.+.+++.++++.+.|+... .++ ..+.++++.+++.+.|+++.. .++
T Consensus 285 gav~~~-~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~---~~~----l~~~~~~~g~~l~~~L~~l~~----~~~- 351 (433)
T PRK08117 285 SAVVAS-KELMEQWPLGSHGTTFGGNPVACAAALATLEVIK---EEK----LLDNANEMGAYALERLEVLKE----KHP- 351 (433)
T ss_pred eeEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH---hcc----HHHHHHHHHHHHHHHHHHHHh----cCC-
Confidence 999999 7999888655555567889999999999998541 112 344555556666666665431 000
Q ss_pred cccccceeeCCCCCeeEEEecCCC-------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHHHH
Q 024997 182 QYCTYFKKIRPPSPAYAWVKCERE-------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLHRL 252 (259)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~~l 252 (259)
.+.. ....|.++.+.+... ....+...+.++||.+.+. +...+.+|+++ ..+++++++++++|
T Consensus 352 ----~~~~-vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~~~~lRl~p~~~~t~~~i~~~~~~l 423 (433)
T PRK08117 352 ----VIGD-VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---GNAGNVLRMIPPLTVTKEEIDEGLDIL 423 (433)
T ss_pred ----ceee-eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---CCCCCEEEEeCCccCCHHHHHHHHHHH
Confidence 0111 223345555555211 1234445566789988762 22357999995 45999999999999
Q ss_pred HHHhh
Q 024997 253 DELIS 257 (259)
Q Consensus 253 ~~~l~ 257 (259)
.++++
T Consensus 424 ~~~l~ 428 (433)
T PRK08117 424 DEALT 428 (433)
T ss_pred HHHHH
Confidence 98875
No 232
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.62 E-value=4.5e-14 Score=120.79 Aligned_cols=183 Identities=12% Similarity=0.097 Sum_probs=123.5
Q ss_pred hhhhcccCC-CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEecccccc-CCC
Q 024997 25 ANLWGNASS-DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLT-GHA 97 (259)
Q Consensus 25 ~~~l~~~~~-~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~-g~~ 97 (259)
.+++++.+. +++++|++.+|+||+-.+. .++|+++|+.+|+|+.|..| ...-+-..+-+|++.|.||.+ |..
T Consensus 138 ~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP-~~q~PL~~GaDIVvhSaTKyl~GHs 216 (396)
T COG0626 138 DEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATP-VLQRPLELGADIVVHSATKYLGGHS 216 (396)
T ss_pred hHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccc-cccChhhcCCCEEEEeccccccCCc
Confidence 335566665 6999999999999999998 48999999999999998311 111111234689999999999 567
Q ss_pred cceEEEEEecCHHHHHHHHHhhh-hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 98 GSRFGWAVIKDEAVYQRMSAYIS-LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 98 G~R~G~i~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
.+=.|.++++++++.+.+..... ..+...++...+...+.++ .+..+.++..++...+.+.|++.+.+..
T Consensus 217 Dvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk---------TL~~Rm~~~~~nA~~IA~~L~~~p~V~~ 287 (396)
T COG0626 217 DVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR---------TLALRMERHNENALKIAEFLADHPKVKK 287 (396)
T ss_pred ceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc---------hHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 78888777675667776644444 4677788877766555554 6777899999999999999999887654
Q ss_pred ccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 177 QEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 177 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
...|..... .++......|-.+.+.+... +.+.+++++-.+
T Consensus 288 V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~--~~~~~f~~~L~l 332 (396)
T COG0626 288 VYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--EAAKKFLDSLKL 332 (396)
T ss_pred EECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--HHHHHHHHhCCc
Confidence 444431111 12211111344445556542 555556555444
No 233
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.61 E-value=1.1e-13 Score=121.38 Aligned_cols=215 Identities=12% Similarity=0.029 Sum_probs=141.0
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhH----HHhhcCCCcEEEeecccc----CCCCCC--CCCCCCCeEEEecc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN----KAVLKGPYAKSIYDHAYF----WPHFAP--IPAPADEELMIFTI 90 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~----~~la~~~~~~vi~De~y~----~~~~~~--~~~~~~~~i~~~S~ 90 (259)
..+|.+++++.+++.++.++++..+|-++..- .++|+++|+++++|+++. ...... .....+.+++++|+
T Consensus 205 g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~ 284 (493)
T PRK13580 205 GLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTT 284 (493)
T ss_pred CccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCC
Confidence 35788999999988777778888887755332 389999999999999993 111100 00123457999999
Q ss_pred cccc-CCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 91 SKLT-GHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 91 SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
+|++ |..| |++++. +++++.+.........++.++..++.+..+.... .....+.++++.++.+.+.+.|.
T Consensus 285 hKaL~GP~G---G~I~~~-~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~----~~ef~~y~~~l~~Na~~La~~L~ 356 (493)
T PRK13580 285 HKTLRGPRG---GLVLAK-KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR----TPEFQKYAQQVVDNARALAEGFL 356 (493)
T ss_pred hhhccCCCe---EEEEec-HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh----CccHHHHHHHHHHHHHHHHHHHH
Confidence 9998 5445 999998 6999988544333333344444444444444321 11235568899999999999998
Q ss_pred hcCCCccccccccccccceeeC-CCCCeeEEEecCCCc--hHHHHHHHHHcCeeeecCCccc-C-C---CCeEEEEeec-
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCEREE--DKDCYGILKAAKIIGREGKKFR-A-E---ARFVRLSLLK- 240 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~ll~~~gi~~~~g~~f~-~-~---~~~~Ris~~~- 240 (259)
+.+ +.... ....-.+++++.+.+ ...+.+.|.+.||.+.+-.... + + +..+||++..
T Consensus 357 ~~G--------------~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ 422 (493)
T PRK13580 357 KRG--------------ARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPAL 422 (493)
T ss_pred hcC--------------CCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchh
Confidence 766 22211 112234566665542 3467778889999886533222 1 2 4679999743
Q ss_pred -----ChhhHHHHHHHHHHHhh
Q 024997 241 -----SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 241 -----~~~~~~~~~~~l~~~l~ 257 (259)
++++++++.+.|.+++.
T Consensus 423 ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 423 TTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred hhcCCCHHHHHHHHHHHHHHHH
Confidence 57899999999988765
No 234
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=8e-14 Score=120.59 Aligned_cols=195 Identities=10% Similarity=0.040 Sum_probs=131.6
Q ss_pred ccCccccc-ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCC--CcEEEeeccccCCCCCCCCCCCCCeE
Q 024997 14 FESVDYKF-EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGP--YAKSIYDHAYFWPHFAPIPAPADEEL 85 (259)
Q Consensus 14 ~g~~~~~~-~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~--~~~vi~De~y~~~~~~~~~~~~~~~i 85 (259)
.|.++.-+ ..|.+.+++.+++++++|++.+|+||+|.+. .++|+++ |+++++|+++-.+.. .-+...+-++
T Consensus 125 ~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDi 203 (395)
T PRK08114 125 LGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDI 203 (395)
T ss_pred cCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcE
Confidence 45544333 2467889999998999999999999999998 3888887 499999998821211 1113446789
Q ss_pred EEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 86 ~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
++.|.+|.+ |.+++-.|.++.. ++..+.++......+...++..-+.+.+. -+.+.-++++..++...+
T Consensus 204 vv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~~a~l~~rg---------l~TL~lR~~~~~~na~~v 273 (395)
T PRK08114 204 SIQAGTKYLVGHSDAMIGTAVAN-ARCWEQLRENSYLMGQMVDADTAYMTSRG---------LRTLGVRLRQHEESSLKV 273 (395)
T ss_pred EEEcCcccccCCCcceeEEEEcC-HHHHHHHHHHHHhccCCCCHHHHHHHHcC---------CCcHHHHHHHHHHHHHHH
Confidence 999999977 5556888977777 57777777666666677777655544333 346778899999999999
Q ss_pred HHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCe
Q 024997 165 SKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKI 219 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi 219 (259)
.+.|+..+.+.....|..... .++......|-.+.+.++.. +.+.+.++++.-.+
T Consensus 274 a~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l 333 (395)
T PRK08114 274 AEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSL 333 (395)
T ss_pred HHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCc
Confidence 999999987654444431111 01111122344555666542 24555566655444
No 235
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.60 E-value=1.2e-13 Score=116.95 Aligned_cols=141 Identities=12% Similarity=0.125 Sum_probs=111.2
Q ss_pred hhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEecccccc-CCCc
Q 024997 25 ANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLT-GHAG 98 (259)
Q Consensus 25 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G 98 (259)
++.+++.+.++++++++.+|.||+..+. .++|+++|+++|+|+.+ ++....-+-..+-+|++.|.+|.+ |.+.
T Consensus 152 ~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf-~~p~~~~pL~lGADIV~hSaTKyi~Ghsd 230 (409)
T KOG0053|consen 152 LKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTF-GSPYNQDPLPLGADIVVHSATKYIGGHSD 230 (409)
T ss_pred HHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCc-CcccccChhhcCCCEEEEeeeeeecCCcc
Confidence 4567777788999999999999999998 49999999999999988 222111111234689999999999 5788
Q ss_pred ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFS 175 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 175 (259)
+-.|.++...+++...++..+..+.++.+++.-....+ +-..+.-+.++..++...+...|++.+.+.
T Consensus 231 vi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~R---------glktl~lRi~~~~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 231 VIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSR---------GLKTLHLRINKHSENALKIALLLEAHPKVK 298 (409)
T ss_pred eeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhc---------CcchhhhhHHHHHHHHHHHHHHhhhCCcee
Confidence 88899998657999999999998889999975443333 444677778888999999999999887654
No 236
>PLN02651 cysteine desulfurase
Probab=99.60 E-value=1.9e-14 Score=124.51 Aligned_cols=207 Identities=15% Similarity=0.099 Sum_probs=131.9
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccccCCCCCCCC-CCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~ 94 (259)
+.+|+++|++.++++++++++++++||||.+++ ++|+++|+++++|.++..+. .++. ...+.++++.|..|.+
T Consensus 124 ~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~-~~~~~~~~~~D~~~~s~hK~~ 202 (364)
T PLN02651 124 GLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGK-IPVDVDDLGVDLMSISGHKIY 202 (364)
T ss_pred CcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCC-cccCcccCCCCEEEechhhhC
Confidence 357888999999889999999999999999983 89999999999999883111 1221 3445699999999976
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhhh------hhcCC-CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 95 GHAGSRFGWAVIKDEAVYQRMSAYIS------LNTMG-VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 95 g~~G~R~G~i~~~~~~~~~~~~~~~~------~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
|..| +|++++.+ +..+.+..... ....+ ++.....++.++++... ...++..++.++..+++.+.
T Consensus 203 gp~G--~g~l~v~~-~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~-----~~~~~i~~~~~~l~~~l~~~ 274 (364)
T PLN02651 203 GPKG--VGALYVRR-RPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAM-----KEMDYDEKHMKALRERLLNG 274 (364)
T ss_pred CCCc--eEEEEEcC-CCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHH
Confidence 6556 89999884 55544332211 01122 33334444555555421 12355677788888888888
Q ss_pred HHh-cCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCC----------------
Q 024997 168 ISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAE---------------- 230 (259)
Q Consensus 168 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~---------------- 230 (259)
|++ ++++.+.. + .. .....+..+.+.++..+.+.+...|.+ |.++.|..+..+
T Consensus 275 l~~~~~~~~i~~--~-----~~-~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~ 344 (364)
T PLN02651 275 LRAKLGGVRVNG--P-----RD-PEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEE 344 (364)
T ss_pred HHhhCCCEEEEC--C-----CC-cccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChH
Confidence 764 44432211 0 00 001112244445565556666666654 999999866422
Q ss_pred --CCeEEEEeec--ChhhHH
Q 024997 231 --ARFVRLSLLK--SQDDFD 246 (259)
Q Consensus 231 --~~~~Ris~~~--~~~~~~ 246 (259)
.+.+|+|++. +.++++
T Consensus 345 ~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 345 MAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred HhCceEEEEcCCCCCHHHcC
Confidence 3789999976 666653
No 237
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=9.5e-14 Score=122.09 Aligned_cols=200 Identities=13% Similarity=0.042 Sum_probs=130.6
Q ss_pred CceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcce
Q 024997 35 THLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSR 100 (259)
Q Consensus 35 ~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R 100 (259)
+..+ ++..| +| +|... .++|+++|+++|+||+| |+.....+. ...+.+..+.|+||.++ .|++
T Consensus 198 ~iaa-vi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G~p 274 (425)
T PRK07495 198 RVAA-IIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GGFP 274 (425)
T ss_pred ceEE-EEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhc-CCcc
Confidence 4555 55555 34 66442 28999999999999998 432221111 22334556899999998 8999
Q ss_pred EEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 024997 101 FGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIA 180 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 180 (259)
+|+++++ +++.+.+.......+++.+++.++++.+.++...++ + ..+.+++..+++.+.|+.+.. .++
T Consensus 275 igav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~----l~~~~~~~g~~l~~~L~~l~~----~~~ 342 (425)
T PRK07495 275 LAAVTGR-AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE---D----LCERANQLGNRLKQRLASLRE----TVP 342 (425)
T ss_pred ceEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc---h----HHHHHHHHHHHHHHHHHHHHh----hCC
Confidence 9999999 799988866555677889999999888888754221 2 244455555555555554321 111
Q ss_pred ccccccceeeCCCCCeeEEEecCCC-----c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHH
Q 024997 181 PQYCTYFKKIRPPSPAYAWVKCERE-----E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLH 250 (259)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~ 250 (259)
. +..+... |+++|+.+... + ...+...+.++|+.+.+. +...+.+||... .++++++++++
T Consensus 343 ~-----i~~vrG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g~~~~~~r~~Ppl~it~~~id~~~~ 413 (425)
T PRK07495 343 E-----IADIRGP-GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---GVHGNVIRFLAPITIQDDVFAEALD 413 (425)
T ss_pred C-----eeeeecC-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---CCCCCEEEEeCCCccCHHHHHHHHH
Confidence 0 2222333 78888887432 1 123444455789998652 222478999964 39999999999
Q ss_pred HHHHHhhh
Q 024997 251 RLDELISK 258 (259)
Q Consensus 251 ~l~~~l~~ 258 (259)
+|.+.+++
T Consensus 414 ~l~~~l~~ 421 (425)
T PRK07495 414 ILEASILE 421 (425)
T ss_pred HHHHHHHH
Confidence 99998763
No 238
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.59 E-value=7.8e-14 Score=112.73 Aligned_cols=235 Identities=13% Similarity=0.114 Sum_probs=156.3
Q ss_pred CCCcccchhhhhhccCcc---cc-c-----ccChhhhcccCC--CCceEEEEcC-CCCCChhhH--------HHhhcCCC
Q 024997 1 MPFYPLYQEQTDYFESVD---YK-F-----EGEANLWGNASS--DTHLVEFVTA-PNNPDGQMN--------KAVLKGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~---~~-~-----~~d~~~l~~~~~--~~~~~i~i~~-p~NPtG~~~--------~~la~~~~ 60 (259)
+|+|+++..+++..|.+. +. | .+|.+.+.+.+. +...++++.. .|||||.-. .+..++.+
T Consensus 132 nPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~ 211 (410)
T KOG1412|consen 132 NPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKN 211 (410)
T ss_pred CCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcC
Confidence 599999999999999653 22 2 677777776662 3333434444 599999887 26667889
Q ss_pred cEEEeeccc--cCC-CCC----C---CCCCCCCeEEEeccccccCCCcceEEEEEe--cCHHHHHH----HHHhhhhhcC
Q 024997 61 AKSIYDHAY--FWP-HFA----P---IPAPADEELMIFTISKLTGHAGSRFGWAVI--KDEAVYQR----MSAYISLNTM 124 (259)
Q Consensus 61 ~~vi~De~y--~~~-~~~----~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~~~~----~~~~~~~~~~ 124 (259)
.+.+.|-+| |+. ... . +.......+++.||+|-||+.+=|+|-+.. .++..+.. |....+....
T Consensus 212 lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S 291 (410)
T KOG1412|consen 212 LFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS 291 (410)
T ss_pred ceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccC
Confidence 999999999 421 110 0 113345689999999999999999997543 43455544 4445555567
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc-ceeeCCCCCeeEEEecC
Q 024997 125 GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY-FKKIRPPSPAYAWVKCE 203 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (259)
.++.....++...|+.+. ..++| .+..+.+..|...++..|.+.. ...+.+. |..+.-+.|+|.+-.+
T Consensus 292 NPPAyGArIV~kvL~tP~--lre~W-~~sik~MssRI~~MR~aLrd~L-------~aL~TPGtWDHI~~QiGMFSyTGL- 360 (410)
T KOG1412|consen 292 NPPAYGARIVHKVLSTPE--LREQW-IQSIKTMSSRIKKMRTALRDHL-------VALKTPGTWDHITQQIGMFSYTGL- 360 (410)
T ss_pred CCcchhhHHHHHHhcCHH--HHHHH-HHHHHHHHHHHHHHHHHHHHHH-------HhcCCCCcHHHHHhhccceeecCC-
Confidence 777777888888887541 12223 2223344444444444444211 1111122 6666778899988666
Q ss_pred CCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 204 REEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 204 ~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
....+..+.++++|.+.+ .| ||+++. ...++++..++|.+.+.
T Consensus 361 --tp~qV~~li~~h~vyLl~-----~G----RInisGLN~~NveyVAkAIde~Vr 404 (410)
T KOG1412|consen 361 --TPAQVDHLIENHKVYLLS-----DG----RINISGLNMKNVEYVAKAIDETVR 404 (410)
T ss_pred --CHHHHHHHHHhceEEEec-----CC----cEeeeccccccHHHHHHHHHHHHH
Confidence 578899999999999987 45 999987 78888888888877654
No 239
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.58 E-value=1.2e-13 Score=116.82 Aligned_cols=216 Identities=16% Similarity=0.112 Sum_probs=154.9
Q ss_pred ccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccC
Q 024997 22 EGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTG 95 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g 95 (259)
.+|+++|++++++++.++.+...||-||.+.+ ++|+++++++.+|-++ ++.-...+ ....-++...|-.|+.|
T Consensus 128 ~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~-~~~~vD~ls~SaHK~~G 206 (386)
T COG1104 128 LVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDL-EELGVDLLSFSAHKFGG 206 (386)
T ss_pred eEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccc-cccCcceEEeehhhccC
Confidence 68899999999999999999999999999994 8999999999999987 33222222 22235777888889999
Q ss_pred CCcceEEEEEecCHHHHHH--HHH-----hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 96 HAGSRFGWAVIKDEAVYQR--MSA-----YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 96 ~~G~R~G~i~~~~~~~~~~--~~~-----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
..| +|.++..+ .+.-. +.- -.+..+.+++.+ .+...+++. ....++....++++.++++.+.|
T Consensus 207 pkG--iGaLyv~~-~~~~~p~i~GGgQE~g~RsGTenv~~I--vg~~~A~~~-----a~~~~~~~~~~~~~lr~~l~~~l 276 (386)
T COG1104 207 PKG--IGALYVRP-GVRLEPLIHGGGQERGLRSGTENVPGI--VGFGKAAEI-----AVEELEEENARLRKLRDRLEDGL 276 (386)
T ss_pred CCc--eEEEEECC-CCccCceeccCcCCCCCCCCCccHHHH--HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 89998763 32211 111 122334443333 444445553 23356667888999999999999
Q ss_pred Hhc-CCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCC-----------------
Q 024997 169 SLS-NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAE----------------- 230 (259)
Q Consensus 169 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~----------------- 230 (259)
.+. +...+..- ..+..+..+.+.++....+.....|+.+||++..|+.|..+
T Consensus 277 ~~~~p~~~~~g~----------~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~ 346 (386)
T COG1104 277 LEIIPDVYLNGD----------DEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEEL 346 (386)
T ss_pred HhcCCcEEEcCC----------cccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHH
Confidence 865 43222110 02334556667778777888999999999999999888631
Q ss_pred -CCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 231 -ARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 231 -~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+|+||+. +.++++.+++.+.+++++
T Consensus 347 a~~siR~S~g~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 347 AHGSIRFSLGRFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred hCccEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999987 889999999999988764
No 240
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.58 E-value=4.1e-14 Score=124.10 Aligned_cols=209 Identities=11% Similarity=0.039 Sum_probs=129.6
Q ss_pred hhhhcccCC------CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCC--C--CC-CCC
Q 024997 25 ANLWGNASS------DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAP--I--PA-PAD 82 (259)
Q Consensus 25 ~~~l~~~~~------~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~--~--~~-~~~ 82 (259)
.+.+++.+. +++.++++..-+++.|.+. .++|+++|+++|+||++ |+..... . .+ .+|
T Consensus 178 ~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD 257 (412)
T TIGR02407 178 IAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD 257 (412)
T ss_pred HHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC
Confidence 444666653 2456756555578888754 28999999999999998 5321111 1 11 222
Q ss_pred CeEEEeccccccCCC-cceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 83 EELMIFTISKLTGHA-GSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~-G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+.++||.++ + |+|+|+++++ +++ +.+.......+++.+++...++.+.++.+.+ ..+ ..+.+++..
T Consensus 258 ----i~~~~K~lg-~~G~pigav~~~-~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~--~~~----l~~~~~~~g 324 (412)
T TIGR02407 258 ----IVCLSKSIS-GYGLPLALTLIK-PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWS--DDA----FEKAVQRKS 324 (412)
T ss_pred ----EEEechhcc-CCccceeEEEEc-hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhc--ccH----HHHHHHHHH
Confidence 447899998 6 9999999998 576 5554334445677888877766777763111 111 233444444
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK 240 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~ 240 (259)
+.+.+.|+.+. ..++. +.......|+++|+.++... .+.+...+.++||.+.+.. ...+.+|++..-
T Consensus 325 ~~l~~~l~~l~----~~~~~-----~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~---~~~~~lr~~p~l 392 (412)
T TIGR02407 325 EIIQERLDRIV----AEYPE-----LIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSG---PNDEVIKLLPPL 392 (412)
T ss_pred HHHHHHHHHHH----hhCCC-----ceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccC---CCCCEEEEECCC
Confidence 44444444321 01110 11123456888899986542 3344455557899997632 224689999754
Q ss_pred --ChhhHHHHHHHHHHHhhh
Q 024997 241 --SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 --~~~~~~~~~~~l~~~l~~ 258 (259)
++++++++++++.+.+++
T Consensus 393 ~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 393 TIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 999999999999998864
No 241
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=4e-13 Score=118.06 Aligned_cols=186 Identities=10% Similarity=0.107 Sum_probs=118.6
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCCC
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGHA 97 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 97 (259)
.|++++++.+++++++|++.+|+||+|.+. .++|+++|+++|+|+++-.+.. .-+-..+.++++.|++|.+|..
T Consensus 143 ~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~pl~~GaDivv~S~tK~lgg~ 221 (436)
T PRK07812 143 DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRPLEHGADIVVHSATKYLGGH 221 (436)
T ss_pred CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCchhcCCCEEEEecccccCCC
Confidence 367788888888999999999999999997 4899999999999998721111 1112345678899999999878
Q ss_pred cceEEEEEecCHH------------------------------HHHHHH-HhhhhhcCCCCHHHHHHHHHHHHHHHhcCC
Q 024997 98 GSRFGWAVIKDEA------------------------------VYQRMS-AYISLNTMGVSRECQLRAFKLLKVVLEDGG 146 (259)
Q Consensus 98 G~R~G~i~~~~~~------------------------------~~~~~~-~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 146 (259)
|--+|.+++.... ++.+.+ ......+.+.++..-+.+.+ .
T Consensus 222 G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r---------g 292 (436)
T PRK07812 222 GTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQ---------G 292 (436)
T ss_pred CCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc---------C
Confidence 7767776664211 111111 22333456666654443333 3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc-c---ceeeC-CCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 147 NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT-Y---FKKIR-PPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
-+.+..+.++..++...+.+.|++.+.+.....|+.... . +.... ...|-.+.++++. +.+.+.+++++-.+
T Consensus 293 l~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~f~~~l~l 369 (436)
T PRK07812 293 LETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAG-GVEAGKAFVNALTL 369 (436)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHHHHHHHhCCc
Confidence 346788899999999999999999998764444431111 1 11111 1234455566653 23445555554443
No 242
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=3e-13 Score=119.73 Aligned_cols=206 Identities=12% Similarity=0.030 Sum_probs=133.8
Q ss_pred hcccCC-CCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCCCCCCC----CCCCCCeEEEecc
Q 024997 28 WGNASS-DTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWPHFAPI----PAPADEELMIFTI 90 (259)
Q Consensus 28 l~~~~~-~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~~~~~~----~~~~~~~i~~~S~ 90 (259)
+++.+. +++.+ ++..|-+..|.+. .++|+++|+++|.||++ |+.....+ .+..+ + +-++
T Consensus 211 l~~~~~~~~iAa-vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~P-D--iv~~ 286 (443)
T PRK06058 211 IEKQVGADNLAA-VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVP-D--LITT 286 (443)
T ss_pred HHHhhCCCceEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCC-C--EEEE
Confidence 334443 45566 6678877776554 28999999999999999 52211111 11111 2 3466
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
+|.++ .|+++|+++++ +++.+.+.......+++.+++.++++.+.|+...+ ++ ..++++++.+++.+.|++
T Consensus 287 gK~l~-~G~Pi~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~----l~~~~~~~g~~l~~~L~~ 357 (443)
T PRK06058 287 AKGIA-GGLPLSAVTGR-AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE---DD----LVARARQIEALMTDRLRA 357 (443)
T ss_pred ccccc-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cC----HHHHHHHHHHHHHHHHHH
Confidence 89998 89999999999 79998887665667889999999999999986421 22 355566666677777765
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCC----Cch---HHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecC
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----EED---KDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKS 241 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~ 241 (259)
+.. .. ..+..+...|.++.+--... .+. ..+...+.++||.+.++..++ +++|+.. ..+
T Consensus 358 l~~----~~-----~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~---~~lr~~Ppl~~t 425 (443)
T PRK06058 358 LAA----ED-----DRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYG---NVIRLLPPLVIG 425 (443)
T ss_pred HHh----hC-----CcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCC---CEEEEECCCccC
Confidence 431 00 01233455555543322121 111 223333447899998864443 6899974 459
Q ss_pred hhhHHHHHHHHHHHhhh
Q 024997 242 QDDFDLLLHRLDELISK 258 (259)
Q Consensus 242 ~~~~~~~~~~l~~~l~~ 258 (259)
++++++++++|.+++++
T Consensus 426 ~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 426 DELLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998864
No 243
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.56 E-value=6.4e-13 Score=115.15 Aligned_cols=114 Identities=15% Similarity=0.001 Sum_probs=83.2
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...+...|.++. ++.+|++++++.+++++++|+ |+||+|... .++|+++|++||+|++
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa 154 (376)
T TIGR02379 78 SYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAA 154 (376)
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECc
Confidence 4788888888888887762 356788889999988899865 778889876 3899999999999998
Q ss_pred c-cCCCCCCCCCCCCCeEEEeccc----cccCCCcceEEEEEecCHHHHHHHHHhhh
Q 024997 69 Y-FWPHFAPIPAPADEELMIFTIS----KLTGHAGSRFGWAVIKDEAVYQRMSAYIS 120 (259)
Q Consensus 69 y-~~~~~~~~~~~~~~~i~~~S~S----K~~g~~G~R~G~i~~~~~~~~~~~~~~~~ 120 (259)
| ++..+.. ...+....+++|| |.+. +|.+.|+++++++++.++++.++.
T Consensus 155 ~~~g~~~~~--~~~g~~~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~ 208 (376)
T TIGR02379 155 QGVMSTYKG--RALGSIGHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIRE 208 (376)
T ss_pred cccCCccCC--cccCCCCCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHH
Confidence 8 3211111 0112223455566 8885 788889999887899998887654
No 244
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.55 E-value=2.4e-13 Score=113.36 Aligned_cols=212 Identities=11% Similarity=0.086 Sum_probs=150.9
Q ss_pred ccChhhhcccC---C-CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc----cCCCCCCCCC----CCCCe
Q 024997 22 EGEANLWGNAS---S-DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY----FWPHFAPIPA----PADEE 84 (259)
Q Consensus 22 ~~d~~~l~~~~---~-~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y----~~~~~~~~~~----~~~~~ 84 (259)
..|++.|++++ + ..+|+|-+.+.+..+|.+-+ ++|++||++-.+||++ |++....+.. ...-+
T Consensus 286 HND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvD 365 (570)
T KOG1360|consen 286 HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVD 365 (570)
T ss_pred cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhh
Confidence 57788888887 2 36899999999999999974 7889999999999998 6777666652 34458
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
|+.||+.|+||+-| |||.+. ..++|.++.+... .+.+.++.....++++++.+.. ..-...++..+++..
T Consensus 366 iIsGTLgKafGcVG---GYIAat-~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~----~eg~~lR~~hqrnv~ 437 (570)
T KOG1360|consen 366 IISGTLGKAFGCVG---GYIAAT-RKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKS----EEGRVLRRQHQRNVK 437 (570)
T ss_pred hcccchhhhccccc---ceehhh-hhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhh----hhhHHHHHHHHHHHH
Confidence 89999999999999 999999 6999999987652 3556677777777777765321 122445777888889
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--CchHHHHHHHHHcCeeeecCCcccC--CCCeEEEEe
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDKDCYGILKAAKIIGREGKKFRA--EARFVRLSL 238 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~ 238 (259)
++.+.|.+++ +.+++.++-+ +-+.+.+ .+.+....++.++||.+..-...-. ++..+||..
T Consensus 438 ~~kq~l~~~G--------------iPVi~~pSHI-iPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaP 502 (570)
T KOG1360|consen 438 YVKQLLMELG--------------IPVIPNPSHI-IPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAP 502 (570)
T ss_pred HHHHHHHHcC--------------CcccCCCcce-eeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCC
Confidence 9999998776 2223322111 1122222 2467788889999999976432222 456778876
Q ss_pred ec--ChhhHHHHHHHHHHHh
Q 024997 239 LK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 239 ~~--~~~~~~~~~~~l~~~l 256 (259)
+. +++-++.+++.+..+-
T Consensus 503 TP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 503 TPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 54 6666777777776553
No 245
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.54 E-value=8.8e-13 Score=117.81 Aligned_cols=237 Identities=11% Similarity=0.033 Sum_probs=145.3
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhh-H-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQM-N-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~-~-----~~la~~~~~~vi~De~ 68 (259)
+|.||.|...++..|.++. .+.+|+++|++.++++++++++++|| |||.+ . .++|+++|+++++|.+
T Consensus 168 ~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a 246 (481)
T PRK04366 168 DSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGA 246 (481)
T ss_pred CCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEec
Confidence 4789999999988887652 35788899999998889999999998 99976 3 2789999999999998
Q ss_pred ccCCCCCCC-CCCCCCeEEEeccccccCCC----cceEEEEEecCHHHHHHHHHhh-------------------hhhcC
Q 024997 69 YFWPHFAPI-PAPADEELMIFTISKLTGHA----GSRFGWAVIKDEAVYQRMSAYI-------------------SLNTM 124 (259)
Q Consensus 69 y~~~~~~~~-~~~~~~~i~~~S~SK~~g~~----G~R~G~i~~~~~~~~~~~~~~~-------------------~~~~~ 124 (259)
+.......+ ++..+.+++++|..|.+|.| |--+|++++. +++.+.+.... +.-..
T Consensus 247 ~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~-~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~ 325 (481)
T PRK04366 247 NLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVK-EELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAF 325 (481)
T ss_pred ChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeeh-hhhHhhCCCCeeeccCCceeecccccccCCCcccc
Confidence 831111111 23456799999999998633 3447899888 57776652100 00000
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec--
Q 024997 125 GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC-- 202 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (259)
..+.....++..++... +.+-+.+..++...+.+++.+.|+++.. +. + + .+.. .-..++.
T Consensus 326 t~~~l~~~~a~~~l~~~----G~~Gl~~~a~~~~~~a~~l~~~L~~~~~--~~-~-~---------~~~~-~~~~~~~~~ 387 (481)
T PRK04366 326 YGNFGVLVRAYAYIRSL----GAEGLREVSEDAVLNANYLKARLKDIYD--LP-Y-D---------RPCM-HEFVLSGKK 387 (481)
T ss_pred cCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHhhCc--cc-C-C---------CCee-EEEEEECcc
Confidence 00111122233333321 2222344445566667777777776521 11 0 0 0000 0012222
Q ss_pred ---CCCchHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 203 ---EREEDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 203 ---~~~~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
++.+...+.+.|.++||.+. +..+.. ..+.+|+|+.. ++++++.+++.|+++.++
T Consensus 388 ~~~~g~~~~~v~~~L~~~Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~ 448 (481)
T PRK04366 388 LKETGVRTLDIAKRLLDYGFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEE 448 (481)
T ss_pred ccccCCCHHHHHHHHHHCCccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHH
Confidence 22234556666667899865 333322 35789999854 889999999999887653
No 246
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=1.8e-12 Score=114.03 Aligned_cols=195 Identities=10% Similarity=0.079 Sum_probs=121.8
Q ss_pred ccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEE
Q 024997 14 FESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMI 87 (259)
Q Consensus 14 ~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~ 87 (259)
.|.++.-+.+ |++++++.+++++++|++.+|+||+|.+. .++|+++|+++|+|.++-.+.. ..+...+.++++
T Consensus 127 ~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~-~~pl~~GaD~vv 205 (433)
T PRK08134 127 FGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-LRPFEHGADLVY 205 (433)
T ss_pred CCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-CCchhcCCCEEE
Confidence 4555433333 67889999999999999999999999998 3899999999999998821211 122234568999
Q ss_pred eccccccCCCcceEEEEEecCHH--------------------------------HHHHHH-HhhhhhcCCCCHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEA--------------------------------VYQRMS-AYISLNTMGVSRECQLRA 134 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~--------------------------------~~~~~~-~~~~~~~~~~~~~~q~~~ 134 (259)
.|.+|.+|.+|-.+|.+++.... +....+ ..........++...+.+
T Consensus 206 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~ 285 (433)
T PRK08134 206 HSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQL 285 (433)
T ss_pred eccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999998888777776652101 000010 111223344555433333
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeC-CCCCeeEEEecCCCchHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIR-PPSPAYAWVKCEREEDKD 209 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~ 209 (259)
. + .-+.+..+.++..++...+.+.|++++.+.....|..... ...... ...|-.+.++++. +.+.
T Consensus 286 ~---~------gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~-~~~~ 355 (433)
T PRK08134 286 L---Q------GIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKG-GRAA 355 (433)
T ss_pred h---c------CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecC-CHHH
Confidence 2 2 3346778899999999999999999987754444432111 111111 2234455666653 3444
Q ss_pred HHHHHHHcCe
Q 024997 210 CYGILKAAKI 219 (259)
Q Consensus 210 ~~~ll~~~gi 219 (259)
+.++++.-.+
T Consensus 356 ~~~f~~~l~l 365 (433)
T PRK08134 356 GRKFIESLKL 365 (433)
T ss_pred HHHHHHhCCc
Confidence 5566655544
No 247
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.51 E-value=6.3e-13 Score=117.21 Aligned_cols=209 Identities=12% Similarity=0.073 Sum_probs=126.5
Q ss_pred cChhhhcccCC---CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--c--CCCCC-CCCC-CCCCe
Q 024997 23 GEANLWGNASS---DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--F--WPHFA-PIPA-PADEE 84 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~--~~~~~-~~~~-~~~~~ 84 (259)
.|++.+++.+. +++.+|++..-..-+|.+. .++|+++|+++|+||+| + +.... ...+ .+|
T Consensus 182 ~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD-- 259 (426)
T PRK00062 182 NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD-- 259 (426)
T ss_pred CCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc--
Confidence 36777777663 3566655553233356554 28899999999999999 3 11110 0001 122
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHh---hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY---ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+.++||.++ .|+++|+++++ +++.+.+... ....+++.+++.++++.+.|+... .++..++..+.....+
T Consensus 260 --i~~~gK~l~-~G~p~ga~~~~-~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~---~~~~~~~~~~~~~~~~ 332 (426)
T PRK00062 260 --LTTLGKIIG-GGLPVGAFGGR-REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLK---EPGFYEELEALTKRLA 332 (426)
T ss_pred --hHhhhhHhh-CCCcceeeeEH-HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHh---cchHHHHHHHHHHHHH
Confidence 579999998 89999999998 7999988532 233457889999999999988641 2233333333333333
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEE-ecCC---------Cc---hHHHHHHHHHcCeeeecCCccc
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWV-KCER---------EE---DKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~---~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
+.+.+.+++.+. .....+.|.++.+. .-+. .+ ...+...+.++||.+.|.
T Consensus 333 ~~l~~~~~~~~~-------------~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~---- 395 (426)
T PRK00062 333 EGLKEAAKKAGI-------------PLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS---- 395 (426)
T ss_pred HHHHHHHHHcCC-------------ceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC----
Confidence 333333333221 11123444443322 1110 01 134445555789999773
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+++++..++++++++++++.+++++
T Consensus 396 -~~~~~~~~~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 396 -QFEAGFVSAAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred -CcCceeeeccCCHHHHHHHHHHHHHHHHh
Confidence 12456888767999999999999988763
No 248
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=6e-13 Score=112.49 Aligned_cols=212 Identities=15% Similarity=0.143 Sum_probs=146.5
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEecc
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTI 90 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~ 90 (259)
.|.+++++++++++.+|++..-+=-.|.+. .++|+++|+++|.||++ ++....-+. ...+..=-+-++
T Consensus 172 nDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tl 251 (404)
T COG4992 172 NDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTL 251 (404)
T ss_pred CCHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEe
Confidence 567889999999999956555555555554 28999999999999999 322211111 011111127789
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
.|.+| -|+.+|.+++. +.+.+.+..-.+..+++.++++-+++.+.++... .++ ..++.++.-+.+.+.|++
T Consensus 252 aK~Lg-GG~PigA~la~-~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~---~e~----ll~~v~~~g~~~~~~L~~ 322 (404)
T COG4992 252 AKALG-GGFPIGAMLAT-EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL---EEG----LLENVREKGEYLLQRLRE 322 (404)
T ss_pred ecccc-CCccceeeEEc-hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc---chh----HHHHHHHHHHHHHHHHHH
Confidence 99998 88999999998 6888888877788899999999999999998652 223 356667777777777776
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDL 247 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~ 247 (259)
+.. .++ .++.++.. |+.+=+.+... ....+...+.++|+++.+ .+++.+|+...- +++++++
T Consensus 323 l~~----~~~-----~v~~vRG~-GLmiGiel~~~~~a~~~~~~~~~~gvL~~~-----a~~~ViR~~PpL~i~~eei~~ 387 (404)
T COG4992 323 LKR----RYP-----LVKEVRGR-GLMIGIELKEPYRARDIVRALREEGVLVLP-----AGPNVIRFLPPLVITEEEIDE 387 (404)
T ss_pred Hhh----cCC-----ceeeeecc-eeEEEEEecCcccHHHHHHHHHHCCeEEec-----CCCCeEEecCCccCCHHHHHH
Confidence 542 100 12222322 33334444443 235555666678999987 556799999743 9999999
Q ss_pred HHHHHHHHhhh
Q 024997 248 LLHRLDELISK 258 (259)
Q Consensus 248 ~~~~l~~~l~~ 258 (259)
+++++.+.+++
T Consensus 388 ~~~~l~~~l~~ 398 (404)
T COG4992 388 ALDALERALAA 398 (404)
T ss_pred HHHHHHHHHHH
Confidence 99999998863
No 249
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.50 E-value=1.7e-12 Score=112.62 Aligned_cols=210 Identities=15% Similarity=0.106 Sum_probs=143.6
Q ss_pred ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEeccccccC
Q 024997 22 EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLTG 95 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~g 95 (259)
.+|++++++.+++++++++++..+|-||..+ .++|+++|+++++|-++. +.....+ ...+.+++++|..|.+|
T Consensus 126 ~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~-~~~~~D~~~~s~~Kl~g 204 (371)
T PF00266_consen 126 SLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDL-DELGADFLVFSSHKLGG 204 (371)
T ss_dssp SCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--T-TTTTESEEEEESTSTTS
T ss_pred hhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccc-cccccceeeecccccCC
Confidence 5677889999999999999999999999988 388999999999999873 2111222 34466899999999667
Q ss_pred CCcceEEEEEecCHHHHHHHHHhhhh--------------------hcC-CCCHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 024997 96 HAGSRFGWAVIKDEAVYQRMSAYISL--------------------NTM-GVSRECQLRAFKLLKVVLEDGGNNIFEFGY 154 (259)
Q Consensus 96 ~~G~R~G~i~~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 154 (259)
.+| +|+++.. ++..+.++..... ... .++.+...++..+++... +.-+++.+
T Consensus 205 p~G--~g~l~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~----~~g~~~i~ 277 (371)
T PF00266_consen 205 PPG--LGFLYVR-PEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLE----EIGIERIR 277 (371)
T ss_dssp SST--EEEEEEE-HHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred CCc--hhhheeh-hhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhh----ccccccch
Confidence 788 7999999 6888887432110 011 233333444445555321 12356677
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC-----
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA----- 229 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~----- 229 (259)
++..+..+.+.+.|++++.+.+.. + ...+..+..+.+.++..+.+.+.+.|++.||.+..|..+..
T Consensus 278 ~~~~~l~~~~~~~l~~~~~~~~~~-~--------~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~ 348 (371)
T PF00266_consen 278 ERIRELAEYLREALEELPGIEVLG-P--------DDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDI 348 (371)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEESS-S--------SCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHH
T ss_pred hhhhhHHHHHHhhhhcCCceeEee-e--------cccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHH
Confidence 888889999999999887533311 0 01233444566666766777888888888999999877651
Q ss_pred --CCCeEEEEeec--ChhhHHHH
Q 024997 230 --EARFVRLSLLK--SQDDFDLL 248 (259)
Q Consensus 230 --~~~~~Ris~~~--~~~~~~~~ 248 (259)
-.+.+|+|+.. +.++++++
T Consensus 349 ~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 349 LGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHTTTEEEEE-GTTSSHHHHHHH
T ss_pred hCCCCEEEEeccCCCCHHHHhhC
Confidence 13899999976 88888763
No 250
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.49 E-value=3.5e-12 Score=109.67 Aligned_cols=227 Identities=14% Similarity=0.087 Sum_probs=138.2
Q ss_pred CCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 2 PFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
|+|+.+...+...|.++. .+.+|++.|++.++++++++++++ |+|... .++|+++|+++|+|+++
T Consensus 66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~ 142 (352)
T cd00616 66 FTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQ 142 (352)
T ss_pred cchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCC
Confidence 566667777777776652 466788899998888889888764 688765 38899999999999998
Q ss_pred -cCCCCCCC-CCCCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhhhhh---------------cCCCCHHH
Q 024997 70 -FWPHFAPI-PAPADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYISLN---------------TMGVSREC 130 (259)
Q Consensus 70 -~~~~~~~~-~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 130 (259)
++...... .+. ...+.+.|++ |.++ +-+.|+++..++++.+.+....... ....+.+.
T Consensus 143 ~~g~~~~~~~~~~-~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T cd00616 143 ALGATYKGRKVGT-FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQ 219 (352)
T ss_pred CCCCeECCEEccc-CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHH
Confidence 32111110 011 1246677766 9884 2345888887668888776543211 12233333
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC---CCch
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE---REED 207 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 207 (259)
..++...++ .+++..++.+++.+.+.+.|++++++.+..-.+. .......+.+.++ ..+.
T Consensus 220 aa~~~~~l~---------~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 282 (352)
T cd00616 220 AAIGLAQLE---------KLDEIIARRREIAERYKELLADLPGIRLPDVPPG--------VKHSYHLYVIRLDPEAGESR 282 (352)
T ss_pred HHHHHHHHH---------hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC--------CceeeEEEEEEECCcCCCCH
Confidence 333332222 3455667778888888888887665432210000 0012233344454 2355
Q ss_pred HHHHHHHHHcCeeeecCCcccC------------------------CCCeEEEEeec--ChhhHHHHHHHHH
Q 024997 208 KDCYGILKAAKIIGREGKKFRA------------------------EARFVRLSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~------------------------~~~~~Ris~~~--~~~~~~~~~~~l~ 253 (259)
+.+.+.|+++||.+... +.+ ..+.+|+++.. ++++++.+++.|+
T Consensus 283 ~~v~~~L~~~gI~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 283 DELIEALKEAGIETRVH--YPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHHHCCCCeeee--cCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 66777777889966421 111 02679999865 8999999988763
No 251
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.48 E-value=2.1e-11 Score=107.17 Aligned_cols=216 Identities=10% Similarity=0.006 Sum_probs=129.6
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeeccc-cC--CCCCCCCCCCCCeEEEeccccc
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAY-FW--PHFAPIPAPADEELMIFTISKL 93 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y-~~--~~~~~~~~~~~~~i~~~S~SK~ 93 (259)
+.+|++++++.+. .++++|++..+.++.-.-+ .++|+++|+++|+|+++ ++ ............+++++|++|.
T Consensus 153 ~~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~ 232 (416)
T PRK13034 153 GLIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKT 232 (416)
T ss_pred CCcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCccc
Confidence 4588888888874 4678877767665422222 38899999999999997 21 1111111123467999999999
Q ss_pred c-CCCcceEEEEEecCHHHHHHHHHhhhhh-cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc
Q 024997 94 T-GHAGSRFGWAVIKDEAVYQRMSAYISLN-TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS 171 (259)
Q Consensus 94 ~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (259)
+ |..| |++++.++++.+.++...... ..+.+++...++...+... ......+.++++.++.+++.+.|+++
T Consensus 233 l~g~~G---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~----~~~~~~~~~~~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 233 LRGPRG---GMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEA----LQPEFKTYAKQVIANAQALAEVLKER 305 (416)
T ss_pred CCCCCC---eEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHH----hChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 9 4445 888877544545444432211 1123333333333333321 11122345788999999999999876
Q ss_pred CCCccccccccccccceeeCC-CCCeeEEEecCCC--chHHHHHHHHHcCeeeecC-Ccc----cCCCCeEEEEee----
Q 024997 172 NRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKCERE--EDKDCYGILKAAKIIGREG-KKF----RAEARFVRLSLL---- 239 (259)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g-~~f----~~~~~~~Ris~~---- 239 (259)
+ +....+ ....-+++.+... +...+.+.|+++||.+.+- ... ...+..+|+|+.
T Consensus 306 G--------------~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~ 371 (416)
T PRK13034 306 G--------------YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTT 371 (416)
T ss_pred C--------------CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHh
Confidence 4 222211 1222344444432 4566667788889988641 111 112467999962
Q ss_pred --cChhhHHHHHHHHHHHhh
Q 024997 240 --KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 --~~~~~~~~~~~~l~~~l~ 257 (259)
.++++++.+.+.|.+++.
T Consensus 372 ~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 372 RGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 268999999999998876
No 252
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.47 E-value=1e-11 Score=107.84 Aligned_cols=237 Identities=14% Similarity=0.058 Sum_probs=134.5
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...+...|.++. .|.+|++++++.+++++++|+++ ||+|... .++|+++|++||+|++
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a 154 (375)
T PRK11706 78 SYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAA 154 (375)
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECc
Confidence 4788888888888888762 35688889999998888987765 4688765 3889999999999999
Q ss_pred c-cCCCC--CCCCCCCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhhhhh-----------------cCCC
Q 024997 69 Y-FWPHF--APIPAPADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-----------------TMGV 126 (259)
Q Consensus 69 y-~~~~~--~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-----------------~~~~ 126 (259)
| ++... ..+... ..+.+.||. |.++ +|.+.++++.+ +++.++++...... ..+.
T Consensus 155 ~a~g~~~~~~~~g~~--~~~~~~Sf~~~K~l~-~g~gG~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~ 230 (375)
T PRK11706 155 QGVMSTYKGRALGTI--GHIGCFSFHETKNYT-AGEGGALLIND-PALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGS 230 (375)
T ss_pred cccccccCCeeeecC--cCEEEEeCCCCcccc-ccCCeEEEECC-HHHHHHHHHHHHcCCCcchhhccCCCcceeeeccc
Confidence 8 32111 111111 123333433 9996 68887777766 79998777665321 1122
Q ss_pred CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC---CCCeeEEEecC
Q 024997 127 SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP---PSPAYAWVKCE 203 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 203 (259)
+...+...+++... ....+++..++-+++.+...+.|++++......++. .++ ....+.++.++
T Consensus 231 ~~~~~~~~aa~~~~-----ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 297 (375)
T PRK11706 231 SYLPSELQAAYLWA-----QLEAADRINQRRLALWQRYYDALAPLAEAGRIELPS--------IPDDCKHNAHMFYIKLR 297 (375)
T ss_pred ccCcCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCC--------CCCCCceeeEEEEEEEC
Confidence 22111111112111 011234445555555556666666543110000010 011 11224455554
Q ss_pred C-CchHHHHHHHHHcCeeeecCC----c------cc---C--------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 204 R-EEDKDCYGILKAAKIIGREGK----K------FR---A--------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 204 ~-~~~~~~~~ll~~~gi~~~~g~----~------f~---~--------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
. .+.+.+.+.|.++||.++... . ++ . ....+-|-+.. ++++++..++.|+++++
T Consensus 298 ~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 375 (375)
T PRK11706 298 DLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFFS 375 (375)
T ss_pred CcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHhC
Confidence 3 245677777778999876431 0 00 0 01223333322 78999999999988764
No 253
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.46 E-value=6e-12 Score=104.45 Aligned_cols=225 Identities=11% Similarity=0.124 Sum_probs=146.2
Q ss_pred ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCC
Q 024997 22 EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGH 96 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~ 96 (259)
..|++.+++.++++||+|++.+-.||.+.+. .++|+++|+++|+|+.+ ...+..-+-..+-.|++.|.||..|.
T Consensus 134 ~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~-atpyl~rP~~hGADIVvHS~TK~igG 212 (426)
T COG2873 134 PDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTF-ATPYLCRPIEHGADIVVHSATKYIGG 212 (426)
T ss_pred CCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCC-CcceecchhhcCCCEEEEeecccccC
Confidence 4557899999999999999999999999998 49999999999999987 32232223355668999999999988
Q ss_pred CcceEEEEEecCHH-----------------------HHH---------HHH-HhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 97 AGSRFGWAVIKDEA-----------------------VYQ---------RMS-AYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 97 ~G~R~G~i~~~~~~-----------------------~~~---------~~~-~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
.|--+|-++.+... +.+ +.+ ...+-+..+.+|.+....++.++
T Consensus 213 hGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlE---- 288 (426)
T COG2873 213 HGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLE---- 288 (426)
T ss_pred CccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchh----
Confidence 99989887765210 111 111 12334566777776665555555
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc-----ceeeCCCCCeeEEEecCCC--chHHHHHHHH-
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY-----FKKIRPPSPAYAWVKCERE--EDKDCYGILK- 215 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~- 215 (259)
.+.-++++..+|...+.+.|++.+.......++...+. -+..+...|-.+.+.+++. ....+...|+
T Consensus 289 -----TL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L 363 (426)
T COG2873 289 -----TLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKL 363 (426)
T ss_pred -----hhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHH
Confidence 56678999999999999999999976655544322221 1123334455666666654 1122211111
Q ss_pred ---HcC------eeeecCCccc------------CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 216 ---AAK------IIGREGKKFR------------AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ---~~g------i~~~~g~~f~------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
..+ +.+-|.+..- ..++.+|+|++. |++++++.-|.+.+++
T Consensus 364 ~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 364 FSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALEA 425 (426)
T ss_pred HHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHhc
Confidence 112 2333433221 237889999987 5555566666655543
No 254
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.45 E-value=9.5e-12 Score=109.20 Aligned_cols=211 Identities=12% Similarity=-0.003 Sum_probs=127.7
Q ss_pred ccChhhhcccC---CCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEecccc
Q 024997 22 EGEANLWGNAS---SDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISK 92 (259)
Q Consensus 22 ~~d~~~l~~~~---~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK 92 (259)
.+|++.+++.+ +++++++++++++|+||.+++ ++|+++|+++++|+++. +.....+ ...+.++++.|..|
T Consensus 155 ~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~-~~~gvD~~~~s~hK 233 (406)
T TIGR01814 155 TLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL-HDWGVDFACWCTYK 233 (406)
T ss_pred ccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc-ccCCCCEEEEcCcc
Confidence 45677777766 478999999999999999983 89999999999999883 2111222 24467899999999
Q ss_pred cc-CCCcceEEEEEecCHHHHHHHHHhhhh----------------------hcCC-CCHHHHHHHHHHHHHHHhcCCcc
Q 024997 93 LT-GHAGSRFGWAVIKDEAVYQRMSAYISL----------------------NTMG-VSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 93 ~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.+ |.+| .|..+.+ +. ...+...... ...+ ++.+.-.++.++++...+ .
T Consensus 234 ~l~g~pG--~~l~v~~-~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~----~ 305 (406)
T TIGR01814 234 YLNAGPG--AGAFVHE-KH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQ----A 305 (406)
T ss_pred ccCCCCC--eEEEEeh-hh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHh----c
Confidence 86 4567 3433334 23 3222211000 0012 233333444445553211 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC----CCCeeEEEecCCCchHHHHHHHHHcCeeeecC
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP----PSPAYAWVKCEREEDKDCYGILKAAKIIGREG 224 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g 224 (259)
-+++.+++.++..+++.+.|+++.+. .+. +....+ ..+..+.+.++ .+.+.+.+.|.++||.+..
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~----~~~-----~~i~~~~~~~~r~~~v~~~~~-~~~~~~~~~L~~~gi~v~~- 374 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGG----PPV-----LTIITPRDHAQRGCQLSLTHP-VPGKAVFQALIKRGVIGDK- 374 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCC----CCc-----eEEeCCCChhhcCCeEEEEec-CCHHHHHHHHHHCCEEEec-
Confidence 24556777788888888877764210 000 111111 11223445555 3445566666778998753
Q ss_pred CcccCCCCeEEEEee--c-ChhhHHHHHHHHHHHh
Q 024997 225 KKFRAEARFVRLSLL--K-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 225 ~~f~~~~~~~Ris~~--~-~~~~~~~~~~~l~~~l 256 (259)
..++.+|+|++ . +.++++.+++.|++++
T Consensus 375 ----~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 375 ----REPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ----cCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 12468999984 3 8999999999998865
No 255
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.44 E-value=3.4e-12 Score=112.49 Aligned_cols=211 Identities=11% Similarity=-0.019 Sum_probs=126.4
Q ss_pred ChhhhcccCC------CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCC
Q 024997 24 EANLWGNASS------DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APAD 82 (259)
Q Consensus 24 d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~ 82 (259)
|.+.|++.+. ++..++++.....-.|.+. .++|+++|+++|+||++ |+.....+. +..+
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P 260 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP 260 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC
Confidence 4556676662 2345644444344455433 28999999999999998 532111111 1111
Q ss_pred CeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 83 EELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
. +.++||.++..|+++|+++++ +++ ..+.......+++.+++...++.+.++...+ . ....+.++++.+
T Consensus 261 -D--i~t~~K~l~~~G~pigav~~~-~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~--~----~~l~~~~~~~g~ 329 (425)
T PRK09264 261 -D--IVTLSKSISGYGLPMALVLIK-PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS--D----DAFEKEVKAKGE 329 (425)
T ss_pred -C--EEEeccccCCCccceEEEEEc-hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh--h----hHHHHHHHHHHH
Confidence 2 457899998559999999999 576 3443323344567777777777677742210 1 124556666666
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-- 239 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-- 239 (259)
.+.+.|+.+.. .++. +.......|.+.++.+.... ...+...+.++||.+.+...+ ...+|++..
T Consensus 330 ~l~~~l~~l~~----~~~~-----~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~---~~~lr~~p~l~ 397 (425)
T PRK09264 330 LVRERLEEIAA----KYPG-----LGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPE---DEVVKLLPPLT 397 (425)
T ss_pred HHHHHHHHHHH----hCCC-----ceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCC---CCEEEEeCCCC
Confidence 66666654321 0100 10112235677788886431 334445555789999874322 367888865
Q ss_pred cChhhHHHHHHHHHHHhh
Q 024997 240 KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~ 257 (259)
.+++++++++++|.+.++
T Consensus 398 ~t~~ei~~~~~~l~~~l~ 415 (425)
T PRK09264 398 IDEEELEEGLDILEEAVA 415 (425)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 489999999999998764
No 256
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.44 E-value=1.3e-11 Score=108.68 Aligned_cols=233 Identities=12% Similarity=0.111 Sum_probs=140.3
Q ss_pred hhccCccccc--ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCe
Q 024997 12 DYFESVDYKF--EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEE 84 (259)
Q Consensus 12 ~~~g~~~~~~--~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~ 84 (259)
...|.++.-+ ..|++.+++.+++++++|++.+|+||+|.+. .++|+++|+++|+|.++-.+.. .-+...+.+
T Consensus 130 ~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~~~GaD 208 (437)
T PRK05613 130 NRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPLELGAD 208 (437)
T ss_pred HhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChHHhCCC
Confidence 3345554322 2367889999999999989999999999777 3889999999999998721111 111123458
Q ss_pred EEEeccccccCCCcceEEEEEecCHHH-----------------------------------H-HHHHHhhhhhcCCCCH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAV-----------------------------------Y-QRMSAYISLNTMGVSR 128 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~-----------------------------------~-~~~~~~~~~~~~~~~~ 128 (259)
+++.|++|.++..|--+|-+++.+.++ . +.........+.+.++
T Consensus 209 ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p 288 (437)
T PRK05613 209 VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSP 288 (437)
T ss_pred EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCH
Confidence 999999999986665555544421110 0 1112233345566777
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc-c---ceee-CCCCCeeEEEecC
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT-Y---FKKI-RPPSPAYAWVKCE 203 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~~~-~~~~~~~~~~~~~ 203 (259)
...+.+.+.+ +.+..+.++..++...+.+.|++.+.+.....|..... . .... ....|-.+.+.++
T Consensus 289 ~~a~l~~rgl---------~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~ 359 (437)
T PRK05613 289 FNAWVTAQGL---------DTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIK 359 (437)
T ss_pred HHHHHHHccc---------CcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEec
Confidence 6555444443 46778899999999999999999998754444432211 1 1111 1112445566665
Q ss_pred CCchHHHHHHHHHcCeeee---cCC------------c----------ccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 204 REEDKDCYGILKAAKIIGR---EGK------------K----------FRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 204 ~~~~~~~~~ll~~~gi~~~---~g~------------~----------f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
. +.+.+.+++++-.+... -|. + .+.+++.+|||++- |+.+++++-|.+.|+
T Consensus 360 ~-~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl--E~~~dLi~Dl~~Al~ 435 (437)
T PRK05613 360 G-GKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI--EDIDDIIADLEGGFA 435 (437)
T ss_pred C-CHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 3 34555566655444221 111 0 01125789999987 344455555555554
No 257
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.43 E-value=7e-12 Score=109.40 Aligned_cols=210 Identities=12% Similarity=0.049 Sum_probs=129.5
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEecc
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTI 90 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~ 90 (259)
.|++.|++.+.+++.++++...++..|.+. .++|+++|+++|+||++ |+.....+. ...+...-+.++
T Consensus 167 ~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~ 246 (395)
T PRK03715 167 NDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTL 246 (395)
T ss_pred chHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeee
Confidence 456778888877777755554455555543 28899999999999998 432221111 111111125788
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
||.+| .|+.+|.+++. +++.. +.......+++.+++..+++.+.++... .+ ...+++++.-+.+.+.|++
T Consensus 247 gK~lg-~G~p~~av~~~-~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~---~~----~l~~~~~~~g~~l~~~L~~ 316 (395)
T PRK03715 247 GKGIG-GGVPLAALLAK-AEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLL---AP----GFLEGVRARGEYLKEKLLE 316 (395)
T ss_pred hhhhh-CCcceEEEEEc-ccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHH---hc----cHHHHHHHHHHHHHHHHHH
Confidence 99998 68999999988 58753 3222223456778888888888887541 12 2355666666677776665
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc---CeeeecCCcccCCCCeEEEEeec--ChhhH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA---KIIGREGKKFRAEARFVRLSLLK--SQDDF 245 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~~~~g~~f~~~~~~~Ris~~~--~~~~~ 245 (259)
+.. .. + +...... |..+-+.+.......+.+.+.+. ||.+.+. ..+.+||+... +++++
T Consensus 317 l~~----~~-~-----i~~vrG~-Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~-----~~~~lR~~p~l~~t~~ei 380 (395)
T PRK03715 317 LSE----ER-G-----LEGERGE-GLLRALLLGKDIGPQIVEKARDMQPDGLLLNAP-----RPNLLRFMPALNVTTEEI 380 (395)
T ss_pred Hhh----cC-C-----cCeEEcc-eeEEEEEecCchHHHHHHHHHhccCCCEEEeec-----CCCEEEEeCCcccCHHHH
Confidence 421 00 0 1112222 34444555432223444444455 9988652 23689999854 99999
Q ss_pred HHHHHHHHHHhhh
Q 024997 246 DLLLHRLDELISK 258 (259)
Q Consensus 246 ~~~~~~l~~~l~~ 258 (259)
++++++|.+.+++
T Consensus 381 ~~~~~~l~~~l~~ 393 (395)
T PRK03715 381 DQMIAMLRSVLDK 393 (395)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998763
No 258
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.43 E-value=1e-11 Score=107.48 Aligned_cols=229 Identities=12% Similarity=0.107 Sum_probs=138.8
Q ss_pred hhhhhccCcccccccCh-hhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCC
Q 024997 9 EQTDYFESVDYKFEGEA-NLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPA 81 (259)
Q Consensus 9 ~~~~~~g~~~~~~~~d~-~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~ 81 (259)
..+...|.++.-+.++. +.++ +++ ++++|++.+|+|||+.+. .++|++++ +++|.++ +.....-+-..
T Consensus 122 ~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~-~s~~~~~pl~~ 196 (384)
T PRK06434 122 KVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATF-ASPYNQNPLDL 196 (384)
T ss_pred HHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCC-CCcccCCchhc
Confidence 44444565554444443 3343 444 789999999999999887 38899998 4669987 22221111123
Q ss_pred CCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 82 DEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 82 ~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
.-++++.|.+|.++.+| .-.|.++..++++.+.++..........+++..+.+.. .-+.+..+.++.+++
T Consensus 197 gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~---------gL~tL~~R~~r~~~~ 267 (384)
T PRK06434 197 GADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALR---------GLKTLGLRMEKHNKN 267 (384)
T ss_pred CCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh---------CCCcHHHHHHHHHHH
Confidence 46899999999996433 55688877656787777765544455556654333333 334678889999999
Q ss_pred HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCee---eecCC------------
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKII---GREGK------------ 225 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---~~~g~------------ 225 (259)
...+.+.|+.++.+.....|... ..+......|..+.+.++. .+.+.+++++-.+. +.-|.
T Consensus 268 a~~~a~~L~~~p~v~~V~yPgl~--~~~~~~~g~g~~~sf~l~~--~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~ 343 (384)
T PRK06434 268 GMELARFLRDSKKISNVYYPDTE--IGKKVLRGFGGMLSFELRS--MEDVHKFIRNLEIPMVAASLGGVESLITLPVETS 343 (384)
T ss_pred HHHHHHHHHcCCCccEEECCChH--HHHHhcCCCCceEEEEECC--HHHHHHHHHhCCcceEccCCCCCCeeeECCCccc
Confidence 99999999999876544444321 1111112234455566653 44455666554442 11121
Q ss_pred c----------ccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 226 K----------FRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 226 ~----------f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+ .+..++.+|||++- |+.+++++-|.+.|.
T Consensus 344 h~~~~~e~~~~~gi~~~liRlsvGl--Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 344 HSSLSPEERERLGISDNLVRFSIGI--EDIDDLIKDIENALS 383 (384)
T ss_pred cccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHhc
Confidence 0 01125689999987 345556666665554
No 259
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.43 E-value=3.1e-11 Score=104.97 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=80.2
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...+...|.++. .+.+|++.+++.+++++++|+ |+||+|... .++|+++|+++|+|++
T Consensus 80 ~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a 156 (379)
T PRK11658 80 SLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAA 156 (379)
T ss_pred CCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECC
Confidence 4778888888888887662 356788999999988899865 677788886 3899999999999999
Q ss_pred c-cCCCCC--CCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh
Q 024997 69 Y-FWPHFA--PIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI 119 (259)
Q Consensus 69 y-~~~~~~--~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~ 119 (259)
+ ++.... .+ +... +.+.||++.-.+++.+.|+++.+++++.++++...
T Consensus 157 ~a~g~~~~~~~~-g~~g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~ 207 (379)
T PRK11658 157 HAVGTYYKGRHI-GARG--TAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLK 207 (379)
T ss_pred CccCCeECCeec-CCCC--CEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHH
Confidence 8 321111 11 1112 24566665544566678999987678888877644
No 260
>PRK06541 hypothetical protein; Provisional
Probab=99.41 E-value=2.5e-11 Score=107.83 Aligned_cols=207 Identities=13% Similarity=0.097 Sum_probs=132.4
Q ss_pred hhhcccCC---CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEE
Q 024997 26 NLWGNASS---DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELM 86 (259)
Q Consensus 26 ~~l~~~~~---~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~ 86 (259)
+.+++.+. ++..+.++..| +++.|.+. .++|+++|+++|+||++ |+.....+. +..+ +
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~P-D-- 284 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVP-D-- 284 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCC-C--
Confidence 44666552 34445566777 78888775 28999999999999999 532111111 1111 2
Q ss_pred EeccccccCCCcc-eEEEEEecCHHHHHHHHHh----hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGS-RFGWAVIKDEAVYQRMSAY----ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 87 ~~S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+-++||.++ .|+ ++|+++++ +++.+.+... ....+.+.+++..+++.+.++... .+ ...++++++.
T Consensus 285 ivt~gK~l~-~G~~pigav~~~-~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~---~~----~~~~~~~~~g 355 (460)
T PRK06541 285 IITCAKGIT-SGYSPLGAMIAS-DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE---RE----GLLDHVRDNE 355 (460)
T ss_pred EEEeccccc-CCccceeEEEEc-HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH---hc----cHHHHHHHHH
Confidence 336999998 887 99999999 6998877532 123467788888888888887531 11 2367778888
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C-------c-------hHHHHHHHHHcCeeeecCCc
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E-------E-------DKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~-------~~~~~~ll~~~gi~~~~g~~ 226 (259)
+++.+.|+++.... .+..+...|.++ -+.+.. . . ...+...+.++||.+.+.
T Consensus 356 ~~l~~~L~~l~~~~----------~v~~vrg~Gl~~-~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-- 422 (460)
T PRK06541 356 PAFRATLEKLLDLP----------IVGDVRGDGYFY-GIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD-- 422 (460)
T ss_pred HHHHHHHHHhhcCC----------CeEEEEecceEE-EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--
Confidence 88888887653211 022233443333 333311 0 0 013334455789999872
Q ss_pred ccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 227 FRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 227 f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
..+.+.+||+.. .++++++++++++.+.+++
T Consensus 423 -~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 423 -DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred -CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 113478999986 5999999999999988753
No 261
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.40 E-value=4.5e-11 Score=102.64 Aligned_cols=205 Identities=15% Similarity=0.085 Sum_probs=136.9
Q ss_pred CCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHH
Q 024997 33 SDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAV 111 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~ 111 (259)
++++++|.+++-.|.||...+++++.+++++++|.+. ++.....+ +..+ +++.|..|.+|.+| +|++++. +++
T Consensus 128 ~~~~~~v~~th~ETstGv~~~~l~~~~~~l~iVDavss~g~~~id~-~~~d--~~~~ssqK~lgP~G--lg~l~~s-~~~ 201 (349)
T TIGR01364 128 SEDAAYVHYCANETIHGVEFRELPDVKNAPLVADMSSNILSRPIDV-SKFG--LIYAGAQKNIGPAG--LTVVIVR-KDL 201 (349)
T ss_pred CCCCCEEEEcCCCCcccEecceecccCCCeEEEEccccccCccCCH-HHcc--EEEEecccccCCCc--eEEEEEC-HHH
Confidence 5678998999999999999889999999999999977 22222222 2233 89999999999998 9999999 688
Q ss_pred HHHHHHh-------h----hhhcC-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 024997 112 YQRMSAY-------I----SLNTM-GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEI 179 (259)
Q Consensus 112 ~~~~~~~-------~----~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 179 (259)
++++... . ..... .++...-++..++++...+. .-++.+.++.++..+.+.+.|++++++.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~---gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~ 278 (349)
T TIGR01364 202 LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQ---GGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPV 278 (349)
T ss_pred HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHhCCCeeccCC
Confidence 7765321 1 01112 23344444555555543211 02677888999999999999998864211100
Q ss_pred cccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 180 APQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.+ ...++..+.+.+++. ..+.+...+.+.|+.+.+|... .+.+|+|+.. +.++++.+++.|+++.
T Consensus 279 ~~---------~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~---~g~vRvS~~~~nt~edid~l~~al~~~~ 346 (349)
T TIGR01364 279 DP---------RNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRS---VGGMRASIYNAMPLEGVQALVDFMKEFQ 346 (349)
T ss_pred CH---------HHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCccc---cCeeEEECcCCCCHHHHHHHHHHHHHHH
Confidence 00 012223344444432 1244445666789987777652 3689999866 8999999999999987
Q ss_pred hh
Q 024997 257 SK 258 (259)
Q Consensus 257 ~~ 258 (259)
++
T Consensus 347 ~~ 348 (349)
T TIGR01364 347 KK 348 (349)
T ss_pred Hh
Confidence 65
No 262
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.40 E-value=5.2e-13 Score=109.41 Aligned_cols=235 Identities=12% Similarity=0.074 Sum_probs=153.6
Q ss_pred CCCcccchhhhhhccCccccc--------ccChhhhcccC---CCCceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDYKF--------EGEANLWGNAS---SDTHLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~---~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|.++..+....|..+..| ++|.+.+-+.+ .+...+++-...|||||.-. .++.++.+.
T Consensus 153 ~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~ 232 (427)
T KOG1411|consen 153 DPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNL 232 (427)
T ss_pred CCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccc
Confidence 699999999999999877221 56666554444 23444545566799999876 267789999
Q ss_pred EEEeeccc--cC-CCC-------CCCCCCCCCeEEEeccccccCCCcceEEEE--EecCHHHHH----HHHHhhhhhcCC
Q 024997 62 KSIYDHAY--FW-PHF-------APIPAPADEELMIFTISKLTGHAGSRFGWA--VIKDEAVYQ----RMSAYISLNTMG 125 (259)
Q Consensus 62 ~vi~De~y--~~-~~~-------~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i--~~~~~~~~~----~~~~~~~~~~~~ 125 (259)
+-+.|.+| |+ .+. ..+.....++++..|++|-+|+-|=|+|.+ ++.+++... +++...+.+..+
T Consensus 233 ~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSn 312 (427)
T KOG1411|consen 233 LPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSN 312 (427)
T ss_pred cchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccC
Confidence 99999999 52 111 111134566899999999999999999975 455555444 455566666667
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc-ceeeCCCCCeeEEEecCC
Q 024997 126 VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY-FKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 204 (259)
++.-...++..++.+ .+..+++...++-..+++...-+.+. ..|.-.+.+. |..+..+-|+|.+-.+
T Consensus 313 PP~hGArIv~~Il~d------~~l~~~W~~evk~MadRi~~mR~~L~----d~L~~~gs~~~W~hI~~QIGMF~fTgl-- 380 (427)
T KOG1411|consen 313 PPLHGARIVATILSD------PDLKNQWLGEVKGMADRIISMRQQLF----DALEKEGSPGNWSHITKQIGMFCFTGL-- 380 (427)
T ss_pred CCccchhhhhhccCC------hHHHHHHHHHHHHHHHhhhhhHHHHh----HHhhcCCCCccHHHHHHhhheeeecCC--
Confidence 666666667777763 23334444433333333322221111 1111111221 6667788899988766
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
+.+.+..+.++++|.+.- .+ |||++. +..+..++.+.|..+.+
T Consensus 381 -~peQv~~l~ke~~iYmT~-----dG----RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 381 -NPEQVDWLTKEYHIYLTK-----DG----RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -CHHHHHHHHhhheeeecc-----Cc----eEeeccccccCCcccchhhHhHhc
Confidence 588999999999998864 34 999977 77777777777766543
No 263
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.39 E-value=4.1e-11 Score=106.48 Aligned_cols=214 Identities=14% Similarity=0.030 Sum_probs=132.3
Q ss_pred cccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc-CCCCCCC-C-CCCCCeEEEeccc
Q 024997 21 FEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF-WPHFAPI-P-APADEELMIFTIS 91 (259)
Q Consensus 21 ~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~-~~~~~~~-~-~~~~~~i~~~S~S 91 (259)
..+|.++|++.+.+ +++++++. ++.+|... .++|+++|+++++|+++. +.-.... + ...+.+++++|++
T Consensus 167 g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~h 244 (452)
T PTZ00094 167 GLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTH 244 (452)
T ss_pred CCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCc
Confidence 35788999998843 66665553 33488776 389999999999999982 2111111 1 1224689999999
Q ss_pred ccc-CCCcceEEEEEecCHHHHHHHHHhhh----hhcC-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 92 KLT-GHAGSRFGWAVIKDEAVYQRMSAYIS----LNTM-GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 92 K~~-g~~G~R~G~i~~~~~~~~~~~~~~~~----~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
|.+ |..| |++.+. +++.+.+..... .... +++...-++...+++.. .....++..+++.++.+.+.
T Consensus 245 K~l~GP~G---g~l~~~-~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~----~~~~~~~~~~~i~~l~~~l~ 316 (452)
T PTZ00094 245 KSLRGPRS---GLIFYR-KKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV----QSPEWKEYAKQVLKNAKALA 316 (452)
T ss_pred cCCCCCCc---eEEEEe-cccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH----hChhHHHHHHHHHHHHHHHH
Confidence 977 5554 888887 465554433221 1111 33344444455555542 12234566788899999999
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeEEEecC--CCchHHHHHHHHHcCeee-ecCCcccC---CCCeEEEEee
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE--REEDKDCYGILKAAKIIG-REGKKFRA---EARFVRLSLL 239 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~~-~~g~~f~~---~~~~~Ris~~ 239 (259)
+.|++. ++.+.. + ..... ..++.+. ..+.+.+..+|+++||.+ +++..+.. .++.+|+|+.
T Consensus 317 ~~L~~~-g~~v~~--~---------~~~~~-~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~ 383 (452)
T PTZ00094 317 AALEKR-GYDLVT--G---------GTDNH-LVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTP 383 (452)
T ss_pred HHHHhC-CcEEec--C---------CCCCc-eEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCH
Confidence 998764 222210 0 01111 1333333 335678888888899999 55555442 3579999984
Q ss_pred c------ChhhHHHHHHHHHHHhh
Q 024997 240 K------SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 ~------~~~~~~~~~~~l~~~l~ 257 (259)
. ++++++.+++.|.+++.
T Consensus 384 ~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 384 ALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHH
Confidence 3 38999999999988775
No 264
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=3.1e-11 Score=106.43 Aligned_cols=208 Identities=10% Similarity=0.023 Sum_probs=129.1
Q ss_pred hhhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEE
Q 024997 25 ANLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMI 87 (259)
Q Consensus 25 ~~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~ 87 (259)
.+.+++.+. ++..+++ ..| +...|... .++|+++|+++|+||++ |+.....+. ...+...-+
T Consensus 186 ~~~l~~~l~~~~~~iaavi-~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi 264 (423)
T PRK05964 186 LDALEALLEKHAGEIAAFI-VEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDI 264 (423)
T ss_pred HHHHHHHHHhCCCcEEEEE-EecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCe
Confidence 556666662 3455644 455 56666655 28999999999999998 432221111 111112224
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHh------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAY------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
.++||.++..++++|+++++ +++.+.+... ....+++.+++...++.+.++... .+++ .+++.+.-
T Consensus 265 ~~~~K~l~gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~---~~~~----~~~~~~~g 336 (423)
T PRK05964 265 MCLSKGLTGGYLPLAATLCT-AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE---DEPV----LERVAALS 336 (423)
T ss_pred eeeehhhhcCcccceEEEEc-HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH---hcCH----HHHHHHHH
Confidence 58899997444899999988 7999988532 123455678888888888887531 2233 45566666
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc----hHHHHHHHHHcCeeeecCCcccCCCCeEEEE
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE----DKDCYGILKAAKIIGREGKKFRAEARFVRLS 237 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris 237 (259)
+.+.+.|+++... + .+...... |..+.+.+...+ ...+...+.++||.+.+. + +.+|++
T Consensus 337 ~~l~~~l~~l~~~-----~-----~i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~-----~-~~lR~~ 399 (423)
T PRK05964 337 AGLAEGLEPFRDL-----P-----GVADVRVL-GAIGAVELDRPVLERDGPALRAFALERGVLLRPL-----G-NTIYLM 399 (423)
T ss_pred HHHHHHHHhhccC-----C-----CeEEeecc-cEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec-----C-CEEEEe
Confidence 6666666654311 0 02222333 333344443321 334455556789999862 2 579999
Q ss_pred ee--cChhhHHHHHHHHHHHhhh
Q 024997 238 LL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 238 ~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
.. .++++++.+++++++++++
T Consensus 400 p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 400 PPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred CCcccCHHHHHHHHHHHHHHHhh
Confidence 75 4999999999999998864
No 265
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.38 E-value=4.1e-11 Score=106.12 Aligned_cols=196 Identities=9% Similarity=0.047 Sum_probs=122.7
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCC--C--C-CCCCeEEEeccccccCCC
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPI--P--A-PADEELMIFTISKLTGHA 97 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~--~--~-~~~~~i~~~S~SK~~g~~ 97 (259)
++..+|++.......|.+. .++|+++|+++|.||++ |+...... . + .+| +-+++|.++ .
T Consensus 206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD----i~t~gK~l~-~ 280 (445)
T PRK08593 206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD----LMSFGKSLA-G 280 (445)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC----Eeeeccccc-C
Confidence 4567756665566666664 28999999999999998 53221111 0 1 122 558999998 7
Q ss_pred cceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 024997 98 GSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQ 177 (259)
Q Consensus 98 G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 177 (259)
|+++|+++++ +++.+.+.......+.+.+++..+++.+.++...+ ++ ..+++++.-+++.+.|+++..
T Consensus 281 G~p~gav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~----l~~~~~~~g~~l~~~L~~l~~---- 348 (445)
T PRK08593 281 GMPMSAIVGR-KEIMESLEAPAHLFTTGANPVSCAAALATIDMIED---ES----LLQRSAEKGEYARKRFDQWVS---- 348 (445)
T ss_pred CcccEEEEEc-HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh---cc----HHHHHHHHHHHHHHHHHHHHh----
Confidence 8999999999 79999886444445778889998888888875421 12 344555555566666654321
Q ss_pred cccccccccceeeCCCCCeeEEEecCC------Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHH
Q 024997 178 EIAPQYCTYFKKIRPPSPAYAWVKCER------EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFD 246 (259)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~ 246 (259)
.++ .+..+...|.+ ..+.+.. .+ ...+...+.++||.+.+. ..+.+|++... ++++++
T Consensus 349 ~~~-----~v~~vrG~Gl~-~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-----~~~~lr~~p~l~~t~~~id 417 (445)
T PRK08593 349 KYN-----FVGDVRGYGLS-IGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV-----AGNVLRFQPPLVITYEQLD 417 (445)
T ss_pred cCC-----cEEEEeccceE-EEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc-----CCCEEEEECCCccCHHHHH
Confidence 000 02222323222 2232211 01 123334445689988652 23688988753 999999
Q ss_pred HHHHHHHHHhh
Q 024997 247 LLLHRLDELIS 257 (259)
Q Consensus 247 ~~~~~l~~~l~ 257 (259)
.+++++.+.++
T Consensus 418 ~~~~~l~~~l~ 428 (445)
T PRK08593 418 TALNTIEQAFT 428 (445)
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 266
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.38 E-value=6.6e-11 Score=102.05 Aligned_cols=206 Identities=15% Similarity=0.069 Sum_probs=132.1
Q ss_pred ccCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecC
Q 024997 30 NASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKD 108 (259)
Q Consensus 30 ~~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~ 108 (259)
..+++++++|.+++-+|.||..++++++.+|+++++|.+.. +.....+ +..+ +.+.|..|.+|.+| +|++++.
T Consensus 133 ~~~~~~~~lV~~~h~~t~tG~~~~~i~~~~g~~~~VDa~qs~g~~~idv-~~~~--~~~ss~~K~lGP~G--~g~l~~~- 206 (355)
T cd00611 133 WDLAPDAAYVHYCSNETIHGVEFDEVPDTGGVPLVADMSSNILSRPIDV-SKFG--VIYAGAQKNLGPAG--VTVVIVR- 206 (355)
T ss_pred cCCCCCCCEEEEeCCcccccEEcceecccCCCeEEEEccccccCCCCCH-HHhC--EEEeecccccCCCc--eEEEEEC-
Confidence 34567899999999999999998889999999999999873 2111222 2222 45666899999888 8999999
Q ss_pred HHHHHHHHHh-------h----hhhcCCC-CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 109 EAVYQRMSAY-------I----SLNTMGV-SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 109 ~~~~~~~~~~-------~----~~~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
+++++++... . .....+. +.....+..++++...+ ..-++.+.++.++..+.+.+.|++++++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~---~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~ 283 (355)
T cd00611 207 KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKE---QGGVEAMEKRNRQKAQLLYDTIDNSNGFYR 283 (355)
T ss_pred HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 6887765431 1 0001233 33344455555554311 102567788899999999999998854210
Q ss_pred ccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHH
Q 024997 177 QEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~ 253 (259)
....+ ....+..+.+.++.. ..+.....+.+.|+...+|.. ..+.+|+|+.. +.++++.+++.|+
T Consensus 284 ~~~~~---------~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~---~~g~vR~S~~~~nt~edi~~l~~al~ 351 (355)
T cd00611 284 GPVDK---------RARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHR---SVGGIRASIYNALSLEGVQALADFMK 351 (355)
T ss_pred cCCCH---------HHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCc---ccCeEEEEccCCCCHHHHHHHHHHHH
Confidence 00000 012334344555442 113333455568887666554 23789999977 9999999999998
Q ss_pred HHh
Q 024997 254 ELI 256 (259)
Q Consensus 254 ~~l 256 (259)
++-
T Consensus 352 ~~~ 354 (355)
T cd00611 352 EFQ 354 (355)
T ss_pred HHh
Confidence 853
No 267
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.37 E-value=4.4e-11 Score=105.88 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=121.8
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCC--CCCC--CCCCCeEEEeccccccCCCc
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHF--APIP--APADEELMIFTISKLTGHAG 98 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~--~~~~--~~~~~~i~~~S~SK~~g~~G 98 (259)
++..++++...++..|.+. .++|+++|+++|.||++ |+... .... +..+ + +-++||.++ .|
T Consensus 205 ~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P-D--iv~~gK~l~-~G 280 (442)
T TIGR00709 205 DKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEP-D--FVVMSKAVG-GG 280 (442)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCC-c--EEEEccccc-CC
Confidence 3556656665555556553 28999999999999999 53211 1111 1111 2 333899998 59
Q ss_pred ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQE 178 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 178 (259)
+++|+++++ ++ .+.+.......+++.+++.++++.+.|+...+ ++ ..+.++++.+.+.+.|+++.. .
T Consensus 281 ~Pigav~~~-~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~---~~----l~~~~~~~g~~l~~~L~~l~~----~ 347 (442)
T TIGR00709 281 LPLAVLLIA-PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKD---DN----LAQNAQERGERITSFLDDMIK----E 347 (442)
T ss_pred cccEEEEEc-hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHh---cC----HHHHHHHHHHHHHHHHHHHHH----h
Confidence 999999998 57 45554333446788999999999999986421 22 345666666666666665421 0
Q ss_pred ccccccccceeeCCCCCeeEEEecCCC------------c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--C
Q 024997 179 IAPQYCTYFKKIRPPSPAYAWVKCERE------------E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--S 241 (259)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~ 241 (259)
.+ .+..+... |...-+.+... + ...+...+.++||.+.+.. ...+.+|+...- +
T Consensus 348 ~~-----~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~~~l~~~Ppl~it 418 (442)
T TIGR00709 348 HP-----CIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG---REGEVFRLLCPITID 418 (442)
T ss_pred CC-----Ceeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC---CCCCEEEEECCCCCC
Confidence 00 02222333 33333333210 0 1234444557899987632 124788988743 9
Q ss_pred hhhHHHHHHHHHHHhh
Q 024997 242 QDDFDLLLHRLDELIS 257 (259)
Q Consensus 242 ~~~~~~~~~~l~~~l~ 257 (259)
+++++++++++.+.++
T Consensus 419 ~~ei~~~~~~l~~~l~ 434 (442)
T TIGR00709 419 QEECEEGISRFKQAVE 434 (442)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998875
No 268
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.35 E-value=1.5e-10 Score=100.70 Aligned_cols=233 Identities=13% Similarity=0.032 Sum_probs=136.7
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCC----CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASS----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi 64 (259)
+|+|+.+...+...|.++. .+.+|++++++.++ +++++|++ +||+|... .++|+++|++||
T Consensus 76 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI 152 (380)
T TIGR03588 76 PITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKII 152 (380)
T ss_pred CcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEE
Confidence 3678888777777787652 34678888998887 68888775 45678665 388999999999
Q ss_pred eeccc-cCCCC--CCCCCCCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhhhhh-----------------
Q 024997 65 YDHAY-FWPHF--APIPAPADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYISLN----------------- 122 (259)
Q Consensus 65 ~De~y-~~~~~--~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~----------------- 122 (259)
+|+++ ++..+ ..+......++.+.|++ |.++.+ .-|+++..++++.+.++......
T Consensus 153 ~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 230 (380)
T TIGR03588 153 EDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWY 230 (380)
T ss_pred EECCCcccCccCCEeCCCccccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcce
Confidence 99998 22111 11111012267777776 888632 35888887778888776543211
Q ss_pred --------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC
Q 024997 123 --------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS 194 (259)
Q Consensus 123 --------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (259)
....+.+....+..-|+ .+++..++-+++.+.+.+.|++++.+.....+. ....
T Consensus 231 ~~~~~~g~n~~m~~l~aa~g~~qL~---------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~---------~~~~ 292 (380)
T TIGR03588 231 YEQQELGFNYRMTDIQAALGLSQLK---------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPL---------GSKS 292 (380)
T ss_pred eeeeccccccCccHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCC---------CCEe
Confidence 01123333233333333 234455566666777777777665432110000 0001
Q ss_pred Cee-EEEecCC---CchHHHHHHHHHcCeeeecCCcc-----------cC---------CCCeEEEEeec--ChhhHHHH
Q 024997 195 PAY-AWVKCER---EEDKDCYGILKAAKIIGREGKKF-----------RA---------EARFVRLSLLK--SQDDFDLL 248 (259)
Q Consensus 195 ~~~-~~~~~~~---~~~~~~~~ll~~~gi~~~~g~~f-----------~~---------~~~~~Ris~~~--~~~~~~~~ 248 (259)
.++ ..+.+.. .+.+.+.+.|+++||.++..... .. ....+++.+.. ++++++..
T Consensus 293 ~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i 372 (380)
T TIGR03588 293 AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRV 372 (380)
T ss_pred EEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHH
Confidence 111 1222321 24566677778899988743211 00 02457777643 88999999
Q ss_pred HHHHHHHh
Q 024997 249 LHRLDELI 256 (259)
Q Consensus 249 ~~~l~~~l 256 (259)
++.|++++
T Consensus 373 ~~~l~~~~ 380 (380)
T TIGR03588 373 VETLRKVL 380 (380)
T ss_pred HHHHHHhC
Confidence 99998875
No 269
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.34 E-value=1.8e-10 Score=99.49 Aligned_cols=214 Identities=13% Similarity=0.058 Sum_probs=136.4
Q ss_pred hhcccCCCCceEEEEcCCCCCChhhHH--HhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEeccccccCCCcceEEE
Q 024997 27 LWGNASSDTHLVEFVTAPNNPDGQMNK--AVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGW 103 (259)
Q Consensus 27 ~l~~~~~~~~~~i~i~~p~NPtG~~~~--~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 103 (259)
.++..++++++++.+++-+|.||.+.+ ++++++|+++|+|.+.. +.....+. +.++++.|..|.+|.+|- ++.
T Consensus 120 ~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I~~~~g~~~iVDavqs~g~~~idv~---~~D~~~~s~~K~lg~~~G-l~~ 195 (361)
T TIGR01366 120 APEPQADPGVDVIAWAHNETSTGVAVPVRRPEGSDDALVVIDATSGAGGLPVDIA---ETDVYYFAPQKNFASDGG-LWL 195 (361)
T ss_pred CCCCccCCCCCEEEEcccCCccceecccccccccCCCeEEEEcCccccCCCCCHH---HCCEEEEEchhhcCCCCc-eEE
Confidence 344455678999999999999999994 88899999999999872 22222221 258899999999987742 666
Q ss_pred EEecCHHHHHHHHHhhh--------------------hhcCCCCHHHHH-HHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 104 AVIKDEAVYQRMSAYIS--------------------LNTMGVSRECQL-RAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 104 i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
+++. +++++++..... ..+.+.+++... +..++++...+. .-++...++.++..+
T Consensus 196 ~~~s-~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~---gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 196 AIMS-PAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGN---GGLDWAVARTADSSS 271 (361)
T ss_pred EEEC-HHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHc---cCHHHHHHHHHHHHH
Confidence 6667 577766552110 112333333222 344444433211 114556788889999
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec-CCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC-EREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK- 240 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~- 240 (259)
.+.+.+++++.+....-.+ ...+.....+.+ ++.+.+.+.+.|+++||.+.++... .+.+.+|+|+..
T Consensus 272 ~l~~~l~~~~~~~~~~~~~---------~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~-l~~~~vRis~~~~ 341 (361)
T TIGR01366 272 RLYSWAQERPYATPFVTDP---------GKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRK-LGRNQLRVAMFPA 341 (361)
T ss_pred HHHHHHHhCCCcccCCCCh---------hhcccceEEEECCCccCHHHHHHHHHHCCCeeccCccc-cCCCcEEEEcCCC
Confidence 9999999887533211000 001111122222 2235666767777889999876422 235789999966
Q ss_pred -ChhhHHHHHHHHHHHhhh
Q 024997 241 -SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 -~~~~~~~~~~~l~~~l~~ 258 (259)
+.++++.+++.|++++++
T Consensus 342 ~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 342 IDPDDVEALTECVDWVVER 360 (361)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 899999999999998764
No 270
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.33 E-value=1e-10 Score=102.60 Aligned_cols=220 Identities=11% Similarity=0.100 Sum_probs=139.2
Q ss_pred ccccChhhhcccCCC---CceEEEEcCCC-CCChhhH-----HHhhcCCCcEEEeeccc-c-CCCCCCC--CCC-C-CCe
Q 024997 20 KFEGEANLWGNASSD---THLVEFVTAPN-NPDGQMN-----KAVLKGPYAKSIYDHAY-F-WPHFAPI--PAP-A-DEE 84 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~---~~~~i~i~~p~-NPtG~~~-----~~la~~~~~~vi~De~y-~-~~~~~~~--~~~-~-~~~ 84 (259)
.|.+|++.|++++++ +..++++++|+ .++|..- .++|+++|+++|+|++| + .+....+ ... . .-.
T Consensus 186 ~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad 265 (444)
T TIGR03531 186 ELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVD 265 (444)
T ss_pred CCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCC
Confidence 378899999999864 56677887776 4555443 48999999999999999 2 1122112 111 1 226
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+++.|++|.+..+|+ -|.++..++++.+.+...... ...+.+.|.+...++.. ..+.+.+..++..++++.+
T Consensus 266 ~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~-----G~~g~~~li~~~~~~a~~l 337 (444)
T TIGR03531 266 AVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPG--RASASPSLDVLITLLSL-----GSKGYLELLKERKEMYKYL 337 (444)
T ss_pred eEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccC--CCCChHHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHH
Confidence 778899999987776 344446567888888764322 23445677777777763 5667888899999999999
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCee----eecCC-------cc---
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKII----GREGK-------KF--- 227 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~----~~~g~-------~f--- 227 (259)
.+.|+++.. ...+ -....|...+-+.+.+... +...+-.+|-..+|. |.||. .|
T Consensus 338 ~~~L~~l~~----~~~~-----~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~ 408 (444)
T TIGR03531 338 KELLQKLAE----RHGE-----RLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGY 408 (444)
T ss_pred HHHHHHHHH----hhCc-----EeecCCCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecc
Confidence 999887651 1111 0011344555555555422 344555555456662 45665 22
Q ss_pred cC-----CCCeEEEE--eecChhhHHHHHHHHHHHh
Q 024997 228 RA-----EARFVRLS--LLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 228 ~~-----~~~~~Ris--~~~~~~~~~~~~~~l~~~l 256 (259)
+. +-.|+-++ ++.+.++++..+++|.+.+
T Consensus 409 ~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 409 GSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 21 11233333 4558999999999998753
No 271
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.30 E-value=1.1e-10 Score=94.02 Aligned_cols=199 Identities=13% Similarity=0.094 Sum_probs=124.3
Q ss_pred CCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc---c-CCCCCCCC----CCCCCeEEEeccccccC-CCc
Q 024997 33 SDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY---F-WPHFAPIP----APADEELMIFTISKLTG-HAG 98 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y---~-~~~~~~~~----~~~~~~i~~~S~SK~~g-~~G 98 (259)
+.+-++++.-..-...|.+.+ +|+++||+++++||++ | +....... -..+.+++.+|++|.+| ..|
T Consensus 191 k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G 270 (417)
T KOG1359|consen 191 KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG 270 (417)
T ss_pred hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC
Confidence 335677666667788888874 8999999999999998 3 43333332 24677899999999997 677
Q ss_pred ceEEEEEecCHHHHHHHHHhhhhhc--CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISLNT--MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
||.++| +.+++.++...+... ...+|..-..+.+++.-.+ .-.....+++.+..++.+.++.-+
T Consensus 271 ---Gyttgp-~~li~llrqr~RpylFSnslppavV~~a~ka~dllm------~s~~~i~~~~a~~qrfr~~me~aG---- 336 (417)
T KOG1359|consen 271 ---GYTTGP-KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLM------VSSKEIQSRQANTQRFREFMEAAG---- 336 (417)
T ss_pred ---CCccCC-hhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHhcC----
Confidence 999999 899998877655332 2222211122333333211 112235667788888888877533
Q ss_pred ccccccccccceeeCCCCCe-eEEEecCCCchHHHHHHHHHcCeeeecCCccc-CC--CCeEEEEeec--ChhhHHHHHH
Q 024997 177 QEIAPQYCTYFKKIRPPSPA-YAWVKCEREEDKDCYGILKAAKIIGREGKKFR-AE--ARFVRLSLLK--SQDDFDLLLH 250 (259)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~-~~--~~~~Ris~~~--~~~~~~~~~~ 250 (259)
+.......++ -+.+.-......+..++| +.||.|.. -.+. .+ ...+|+.++. ++++++++++
T Consensus 337 ----------ftIsg~~hPI~pv~lGda~lA~~~ad~lL-k~Gi~Vig-fs~PvVP~gkariRVqiSAaHt~edid~~i~ 404 (417)
T KOG1359|consen 337 ----------FTISGASHPICPVMLGDARLASKMADELL-KRGIYVIG-FSYPVVPKGKARIRVQISAAHTEEDIDRLIE 404 (417)
T ss_pred ----------ceecCCCCCccceecccHHHHHHHHHHHH-hcCceEEe-ecCCcCCCCceEEEEEEehhcCHHHHHHHHH
Confidence 2222211111 111111222467788888 57998864 3333 23 4456666654 9999999999
Q ss_pred HHHHHhh
Q 024997 251 RLDELIS 257 (259)
Q Consensus 251 ~l~~~l~ 257 (259)
++.++..
T Consensus 405 Af~~vgr 411 (417)
T KOG1359|consen 405 AFSEVGR 411 (417)
T ss_pred HHHHHHH
Confidence 9987653
No 272
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.30 E-value=2.7e-10 Score=98.24 Aligned_cols=210 Identities=16% Similarity=0.100 Sum_probs=137.0
Q ss_pred hhcc-cCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEE
Q 024997 27 LWGN-ASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWA 104 (259)
Q Consensus 27 ~l~~-~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i 104 (259)
++++ .+++++++|.+++-.+.||...+.+..-+|+++|+|.+. ++.....+ +..+ +++.|..|.+|.+| +|++
T Consensus 132 ~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i~g~l~vVDavss~g~~~idv-~~~d--~~~~ssqK~lgP~G--lg~l 206 (360)
T PRK05355 132 PLDEWQLSDDAAYVHYTSNETIDGTEFHELPDTGDVPLVADMSSDILSRPIDV-SKFG--LIYAGAQKNIGPAG--LTIV 206 (360)
T ss_pred ChhhccCCCCCCEEEEccCCCcceEecCcccccCCCcEEEEcCccccCccCCH-HHcc--EEEEeccccccCCc--eEEE
Confidence 3444 666788999999999999999843433389999999987 22222222 2233 88999999999888 8999
Q ss_pred EecCHHHHHHHHHh-----------hhhhcCC-CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 105 VIKDEAVYQRMSAY-----------ISLNTMG-VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 105 ~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
++. +++++++... ......+ ++...-++..++++...+ ..-++.+.++.++..+.+.+.|+.++
T Consensus 207 ~~s-~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~---~gG~e~i~~r~~~l~~~l~~~l~~~~ 282 (360)
T PRK05355 207 IVR-EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKE---QGGVAAMEKRNQEKAALLYDAIDSSD 282 (360)
T ss_pred EEC-HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999 6887765441 1111122 334444555556654321 10267778899999999999999877
Q ss_pred CCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHH
Q 024997 173 RFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLL 249 (259)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~ 249 (259)
.+... .++ ...++..+.+.+++. ..+.+...+.++|+.+.+|.. ..+.+|+|+.. +.++++.++
T Consensus 283 ~~~~~-~~~---------~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~---~~g~vRiS~~~~nt~eei~~l~ 349 (360)
T PRK05355 283 FYRNP-VAP---------EDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR---SVGGMRASIYNAMPLEGVQALV 349 (360)
T ss_pred CcccC-CCh---------hhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC---ccCcEEEECCCCCCHHHHHHHH
Confidence 32110 000 112333445555543 223444455678999877663 23789999876 899999999
Q ss_pred HHHHHHhhh
Q 024997 250 HRLDELISK 258 (259)
Q Consensus 250 ~~l~~~l~~ 258 (259)
+.|++++++
T Consensus 350 ~~l~~~~~~ 358 (360)
T PRK05355 350 DFMKEFERR 358 (360)
T ss_pred HHHHHHHHh
Confidence 999998764
No 273
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=6.5e-11 Score=100.42 Aligned_cols=224 Identities=13% Similarity=0.030 Sum_probs=137.3
Q ss_pred hhccCccccc-ccChhhhcccC-------CCC-----ceEE-EEcCCCCCChhhH--H---HhhcCCCcEEEeecccc--
Q 024997 12 DYFESVDYKF-EGEANLWGNAS-------SDT-----HLVE-FVTAPNNPDGQMN--K---AVLKGPYAKSIYDHAYF-- 70 (259)
Q Consensus 12 ~~~g~~~~~~-~~d~~~l~~~~-------~~~-----~~~i-~i~~p~NPtG~~~--~---~la~~~~~~vi~De~y~-- 70 (259)
++.|+++.-| .-|+..||+.+ +|+ .+++ ++..-...-|.+- + .+++++.++++.||++-
T Consensus 239 RLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiG 318 (519)
T KOG1357|consen 239 RLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIG 318 (519)
T ss_pred cccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeecccccc
Confidence 3344444334 35566666554 222 2333 3333444555554 2 78899999999999982
Q ss_pred --CCCCCCC---C--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh---hhcCCCCHHHHHHHHHHHHH
Q 024997 71 --WPHFAPI---P--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS---LNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 71 --~~~~~~~---~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~ 140 (259)
++....+ . +..+.+|.|++|+|+||.+| ||+.++ +++++.++.... +.+..+++++|. ....++.
T Consensus 319 A~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags-k~lid~lrt~s~~~~yat~~sppvaqq-~~ssl~~ 393 (519)
T KOG1357|consen 319 AMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS-KELIDYLRTPSPSALYATSLSPPVAQQ-ILTSVKH 393 (519)
T ss_pred ccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc-HHHHhhhccCCCceeecccCChHHHHH-HHHHHHh
Confidence 1222111 1 45667999999999999998 999999 899998876433 223445555555 4445555
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCee--EEEecCCCchHHHHHHHHHcC
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAY--AWVKCEREEDKDCYGILKAAK 218 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~g 218 (259)
.+..+..+...+..+++.++...++..|...+. .+........ +++..+..-..+-.+++ +++
T Consensus 394 i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gf--------------ivyG~~dSpVvplll~~~~k~~~f~r~~l-~~n 458 (519)
T KOG1357|consen 394 IMGEDGTNRGRQKIERLAENSRYFRWELQKMGF--------------IVYGNNDSPVVPLLLYGPAKIVAFSREML-ERN 458 (519)
T ss_pred hcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcE--------------EEecCCCCCcceeeecCcccccHHHHHHH-hcC
Confidence 443345666788899999999999999987662 2222222221 12222222245555666 466
Q ss_pred eeeecCCcccCC--CCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 219 IIGREGKKFRAE--ARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 219 i~~~~g~~f~~~--~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
|.++-+..-..+ ....|++.+. +.++++.+++.+.+.
T Consensus 459 igvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 459 IGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred ceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 766543322222 5667888865 889999999887664
No 274
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.27 E-value=4e-10 Score=100.01 Aligned_cols=210 Identities=13% Similarity=0.111 Sum_probs=128.1
Q ss_pred ChhhhcccCC------CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCC
Q 024997 24 EANLWGNASS------DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APAD 82 (259)
Q Consensus 24 d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~ 82 (259)
|.+.+++.+. ++..++++.....-.|.+. .++|+++|+++|+||++ |+.....+. +..
T Consensus 214 d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~- 292 (459)
T PRK11522 214 NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQ- 292 (459)
T ss_pred CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCC-
Confidence 4555666552 2345644443343334433 28999999999999998 432211111 111
Q ss_pred CeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHH--hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 024997 83 EELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA--YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKK 159 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~--~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (259)
.+ +-+++|.+| .| +.+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+... .++ ..+++++
T Consensus 293 PD--ivt~gK~lg-gG~~Pigav~~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~---~~~----l~~~~~~ 361 (459)
T PRK11522 293 PD--ILCLAKALG-GGVMPIGATIAT-EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLL---EQN----LPAQAEQ 361 (459)
T ss_pred CC--EEEechhhh-CCCccceeEEEc-HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHh---cch----HHHHHHH
Confidence 12 348999998 67 689999999 688887642 2344567788988888888888642 122 3556666
Q ss_pred HHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 160 RWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
.-+++.+.|+++.. .++. .+..+... |..+-+.+... ....+...+.++||.+.+. ..+.+.+|++.
T Consensus 362 ~g~~l~~~L~~l~~----~~~~----~i~~VrG~-Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~---~~~~~~lr~~P 429 (459)
T PRK11522 362 KGDYLLDGFRQLAR----EYPD----LVQEARGK-GMLMAIEFVDNEIGYNFASEMFRQRVLVAGT---LNNAKTIRIEP 429 (459)
T ss_pred HHHHHHHHHHHHHH----hCCC----ceeeEEec-eeEEEEEecCchHHHHHHHHHHHCCeEEEec---CCCCCEEEEEC
Confidence 66677777765431 1110 01122222 44445555432 1233444455689998752 22357899987
Q ss_pred ec--ChhhHHHHHHHHHHHhh
Q 024997 239 LK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 239 ~~--~~~~~~~~~~~l~~~l~ 257 (259)
.- +++++++++++|.++++
T Consensus 430 pl~~t~~~id~~l~~l~~~l~ 450 (459)
T PRK11522 430 PLTLTIEQCEQVLKAARKALA 450 (459)
T ss_pred CccCCHHHHHHHHHHHHHHHH
Confidence 53 99999999999998775
No 275
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.26 E-value=3.9e-10 Score=99.52 Aligned_cols=179 Identities=15% Similarity=0.111 Sum_probs=110.9
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHH--hhhhhcC
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA--YISLNTM 124 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~--~~~~~~~ 124 (259)
++|+++|+++|+||++ |+.....+. +.. .+ +-+++|.+| .| +.+|.+++. +++.+.+.. .....++
T Consensus 252 ~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~-PD--ivt~gK~lg-~G~~Pigavv~~-~~i~~~~~~~~~~~~~T~ 326 (442)
T TIGR03372 252 ALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQ-PD--ILCLAKALG-GGVMPIGATIAT-EAVFSVLFDNPFLHTTTF 326 (442)
T ss_pred HHHHHcCCEEEEeecccCCCccccchhhhhcCCC-CC--eeeehhhhc-CCcccceEEEec-HHHHHhhhccCccccCCC
Confidence 8999999999999998 532211111 111 12 346999998 78 689999998 699888742 2344577
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 125 GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
+.+++..+++.+.|+...+ ++. .+..++.-+++.+.|+++.. .++. .+..+.. .|.++-+.+..
T Consensus 327 ~gnp~~~Aaa~a~L~~i~~---~~l----~~~~~~~G~~l~~~L~~l~~----~~~~----~i~~vRG-~Gl~~giel~~ 390 (442)
T TIGR03372 327 GGNPLACAAALATINELLE---KNL----PAQAAIKGDFLLDGFQQLAA----EYPD----LIIEARG-KGLLMAIEFRD 390 (442)
T ss_pred CCCHHHHHHHHHHHHHHHh---ccH----HHHHHHHHHHHHHHHHHHHH----hCCC----ceEEEec-ceEEEEEEeCC
Confidence 8889988888888886421 222 33444555555555554321 1110 0222232 34555555543
Q ss_pred C-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHh
Q 024997 205 E-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELI 256 (259)
Q Consensus 205 ~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l 256 (259)
. ....+...+.++||.+.+. +.+.+.+||+.. .++++++++++++.+.+
T Consensus 391 ~~~~~~i~~~l~~~Gvl~~~~---~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 391 NEIGYAFAKELFQQNILVAGT---LNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred hHHHHHHHHHHHHCCcEEeec---CCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 2 1233444455689998652 223478999875 39999999999998764
No 276
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.23 E-value=2.6e-09 Score=95.10 Aligned_cols=211 Identities=12% Similarity=0.005 Sum_probs=129.4
Q ss_pred ccChhhhcccCC-CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc----CCCCCCCCCCCCCeEEEeccc
Q 024997 22 EGEANLWGNASS-DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF----WPHFAPIPAPADEELMIFTIS 91 (259)
Q Consensus 22 ~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~----~~~~~~~~~~~~~~i~~~S~S 91 (259)
.+|.++|++.+. .++++|++ ..++ +|... .++|+++|+++++|+++. .......+ ....+++++|++
T Consensus 169 ~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~h 245 (475)
T PLN03226 169 LIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTH 245 (475)
T ss_pred CcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCc
Confidence 458899999884 46777555 3333 34333 489999999999999982 11111111 124578999999
Q ss_pred ccc-CCCcceEEEEEecCHHHH-----------HH---HHHhhhh-hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 024997 92 KLT-GHAGSRFGWAVIKDEAVY-----------QR---MSAYISL-NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 92 K~~-g~~G~R~G~i~~~~~~~~-----------~~---~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 155 (259)
|.+ |..| |++++. ++++ +. +...... ...++++..-.+...+++... ..-..+..+
T Consensus 246 K~L~GP~G---g~I~~~-~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~----~~~~~~~~~ 317 (475)
T PLN03226 246 KSLRGPRG---GMIFFR-KGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM----TPEFKAYQK 317 (475)
T ss_pred ccccCCCc---eEEEEc-hhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh----CcCHHHHHH
Confidence 998 6666 888887 4544 22 1111111 222333333333444555431 112455688
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCeeEEEecCC--CchHHHHHHHHHcCeeeecCCccc----
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKCER--EEDKDCYGILKAAKIIGREGKKFR---- 228 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ll~~~gi~~~~g~~f~---- 228 (259)
++.++.+.+.+.|++.+ +....+ ...-.+++++.. .+...+...|++.||.+..+.-.+
T Consensus 318 ~~~~na~~L~~~L~~~G--------------~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~ 383 (475)
T PLN03226 318 QVKANAAALANRLMSKG--------------YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSA 383 (475)
T ss_pred HHHHHHHHHHHHHHhCC--------------CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCccc
Confidence 89999999999988744 222221 112345566643 256778888999999887643111
Q ss_pred CCCCeEEEEe------ecChhhHHHHHHHHHHHhh
Q 024997 229 AEARFVRLSL------LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ~~~~~~Ris~------~~~~~~~~~~~~~l~~~l~ 257 (259)
..+..+|++. +.++++++++.+.|.++++
T Consensus 384 ~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 384 LVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 1356789854 3377889999988888775
No 277
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.23 E-value=7.9e-10 Score=104.64 Aligned_cols=207 Identities=10% Similarity=-0.010 Sum_probs=130.3
Q ss_pred CCceEEEEcCCCCCChhhHH----HhhcCC---------CcEEEeeccccCCCCCCCC-CCCCCeEEEeccccccC-CCc
Q 024997 34 DTHLVEFVTAPNNPDGQMNK----AVLKGP---------YAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLTG-HAG 98 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~~----~la~~~---------~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g-~~G 98 (259)
++++++.++..+|.||.+++ +.+++. ++++++|.++..++. ++. ...+.+++..|+.|.+| ..|
T Consensus 191 ~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~-piDv~~~~~Dfl~~S~HK~~GgP~G 269 (805)
T PLN02724 191 EAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS-PPDLSRYPADFVVVSFYKIFGYPTG 269 (805)
T ss_pred CCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC-CCChhhcCCCEEEEecceeccCCCC
Confidence 45689999999999999994 223332 368999998842222 221 34567999999999998 667
Q ss_pred ceEEEEEecCHHHHHHHHHhhhh-----------------------hcCCCCH-HHHHHHHHHHHHHHhcCCcchHHHHH
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISL-----------------------NTMGVSR-ECQLRAFKLLKVVLEDGGNNIFEFGY 154 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~-~~q~~~~~~l~~~~~~~~~~~~~~~~ 154 (259)
+|++++. +++.+.+...... ...|.+. +...++.++++... .--+++..
T Consensus 270 --~G~L~vr-~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~----~ig~~~I~ 342 (805)
T PLN02724 270 --LGALLVR-RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLN----RLTISAIA 342 (805)
T ss_pred --ceEEEEe-hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHH----HhChHHHH
Confidence 8999998 5877665432110 1122222 22233444444321 11245667
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccceeeC---------CCCCeeEEEecCCC-----chHHHHHHHHHcCee
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR---------PPSPAYAWVKCERE-----EDKDCYGILKAAKII 220 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-----~~~~~~~ll~~~gi~ 220 (259)
++.++..+++.+.|++++. .+|...+..+. ..++. +.+++... ....+..++.++||.
T Consensus 343 ~~~~~L~~~l~~~L~~l~~-------~~g~~~v~iyg~~~~~~~~~~r~~i-vsFnv~~~~~~~v~~~~v~~l~~~~gI~ 414 (805)
T PLN02724 343 MHTWALTHYVANSLRNLKH-------GNGAPVCVLYGNHTFKLEFHIQGPI-VTFNLKRADGSWVGHREVEKLASLSGIQ 414 (805)
T ss_pred HHHHHHHHHHHHHHHhccC-------CCCCeEEEEcCCCCCCCCcccccCE-EEEEEEcCCCCEeCHHHHHHHHHhcCcE
Confidence 7888888888888887641 00000011111 12333 33333332 345577888889999
Q ss_pred eecCCcccC----------------------------------CCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 221 GREGKKFRA----------------------------------EARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 221 ~~~g~~f~~----------------------------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
+|.|.++.+ +.+.+|+|++. +.++++.+++.|++.+
T Consensus 415 vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 415 LRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred EeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 999987752 13789999987 8999999999999864
No 278
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.23 E-value=6.7e-10 Score=98.32 Aligned_cols=194 Identities=13% Similarity=0.080 Sum_probs=119.0
Q ss_pred CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCc
Q 024997 35 THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAG 98 (259)
Q Consensus 35 ~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G 98 (259)
+..+ ++..| ..-.|.+. .++|+++|+++|+||++ |+.....+. +..+ ++ -++||.++ .|
T Consensus 221 ~iaa-vi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~p-Di--vt~~K~l~-~G 295 (441)
T PRK05769 221 EVAA-IIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEP-DI--ITLAKAIA-GG 295 (441)
T ss_pred ceEE-EEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCC-CE--EEEccccc-CC
Confidence 4556 55555 34444443 28999999999999998 432211111 1112 22 36899998 89
Q ss_pred ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQE 178 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 178 (259)
+++|+++++ +++.+.+ ......+++.+++.++++.+.|+.. ++ ...+++++.-+++.+.|+++.. .
T Consensus 296 ~p~gav~~~-~~i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l-----~~---~~~~~~~~~g~~l~~~L~~l~~----~ 361 (441)
T PRK05769 296 LPLGAVIGR-AELMFLP-PGSHANTFGGNPVAAAAALATLEEL-----EE---GLLENAQKLGEYLRKELKELKE----K 361 (441)
T ss_pred cccEEEEEe-hhhhhcC-CCCCCCCCCcCHHHHHHHHHHHHHH-----HH---HHHHHHHHHHHHHHHHHHHHHH----h
Confidence 999999999 6887543 2233445677899999998888853 11 3456666667777777765431 0
Q ss_pred ccccccccceeeCCCCCeeEEEecCCC----c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHH
Q 024997 179 IAPQYCTYFKKIRPPSPAYAWVKCERE----E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLL 249 (259)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~ 249 (259)
++ .+..+... |...-+.+... + ...+...+.++||.+.+ .+.+.+|++... +++++++++
T Consensus 362 ~~-----~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~-----~~~~~lr~~p~l~~t~~~id~~~ 430 (441)
T PRK05769 362 YE-----FIGDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG-----AGKSAIRIIPPLIITEEEADIGL 430 (441)
T ss_pred CC-----Ceeeeecc-eEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec-----CCCCEEEEeCCCCCCHHHHHHHH
Confidence 00 01112222 33333333211 1 12233344468999875 234678999755 999999999
Q ss_pred HHHHHHhhh
Q 024997 250 HRLDELISK 258 (259)
Q Consensus 250 ~~l~~~l~~ 258 (259)
+++.+.+.+
T Consensus 431 ~~l~~~l~~ 439 (441)
T PRK05769 431 EILEEAIKE 439 (441)
T ss_pred HHHHHHHHH
Confidence 999998763
No 279
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.22 E-value=1.4e-11 Score=103.53 Aligned_cols=101 Identities=12% Similarity=-0.038 Sum_probs=72.1
Q ss_pred CCcccchhhhhhccCccc--------c----cccChhhhcccCC--CCceEEEEcCCCCCChhhH-----HHhhcCCCcE
Q 024997 2 PFYPLYQEQTDYFESVDY--------K----FEGEANLWGNASS--DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAK 62 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~--------~----~~~d~~~l~~~~~--~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~ 62 (259)
|+|+.....+...|..+. . ..+|++.+++.++ ++++++++++| ||+|.++ .++|+++|++
T Consensus 107 ~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~ 185 (294)
T cd00615 107 NCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLP 185 (294)
T ss_pred CchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCe
Confidence 566666666666676541 1 2578899999884 57899999999 7999988 3899999999
Q ss_pred EEeecccc-----CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEE
Q 024997 63 SIYDHAYF-----WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAV 105 (259)
Q Consensus 63 vi~De~y~-----~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~ 105 (259)
+|+||+|. .+.........+.++++.|++|.+ +|++.|+++
T Consensus 186 livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 186 VLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred EEEECcchhhhccCcccCcchhhcCCcEEEEchhccc--chHhHHHHH
Confidence 99999982 121111112346799999999986 577765543
No 280
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.21 E-value=2.2e-09 Score=93.43 Aligned_cols=203 Identities=11% Similarity=0.009 Sum_probs=126.6
Q ss_pred ceEEEEcCCCCCChhhHH--Hhh-cCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHH
Q 024997 36 HLVEFVTAPNNPDGQMNK--AVL-KGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEA 110 (259)
Q Consensus 36 ~~~i~i~~p~NPtG~~~~--~la-~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~ 110 (259)
++++.+++.+|.||..++ +++ +++|+++|+|.+. ++.....+ .+-++++.|..|.++ .+| +|+++.. ++
T Consensus 137 ~~~V~~~h~~t~tG~~~pi~~I~~~~~g~~~vVDa~qs~G~~pidv---~~iD~~~~s~~K~l~~P~G--~g~l~v~-~~ 210 (378)
T PRK03080 137 DRDVVFTWNGTTTGVRVPVARWIGADREGLTICDATSAAFALPLDW---SKLDVYTFSWQKVLGGEGG--HGMAILS-PR 210 (378)
T ss_pred CCCEEEEecCCccceeccchhhccccCCCeEEEecccccccCCCCH---HHCcEEEEehhhhCCCCCc--eEEEEEC-HH
Confidence 456789999999999994 554 4679999999977 22111122 224799999999885 478 9999999 68
Q ss_pred HHHHHHHhh----------------------hhhcCCCCHH-HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 111 VYQRMSAYI----------------------SLNTMGVSRE-CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 111 ~~~~~~~~~----------------------~~~~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
.++++.... ...+.+.+++ .-.++.++++...+ ..-++...++.+++.+.+++.
T Consensus 211 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~---~gG~e~i~~r~~~l~~~l~~~ 287 (378)
T PRK03080 211 AVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANS---IGGLDALIARTAANASVLYDW 287 (378)
T ss_pred HHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHH
Confidence 887765321 0111222222 22222444443321 112466678888888889988
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCC----CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--C
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--S 241 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~ 241 (259)
|++++++.+....+ ...++..+.+.+++ .+.+....++ ++|+.++.|.+.. ..+.+|+|+.. +
T Consensus 288 l~~~~~~~~~~~~~---------~~~s~~i~~~~~~~~~~~~~~~~~~~l~-~~~i~v~~g~~~~-~~~~vRis~~~~~t 356 (378)
T PRK03080 288 AEKTPWATPLVADP---------ATRSNTSVTLDFVDAQAAVDAAAVAKLL-RENGAVDIEPYRD-APNGLRIWCGPTVE 356 (378)
T ss_pred HHhCCCcccccCCc---------cccCccEEEEEcCCchHHHHHHHHHHHH-HcCCeeccccccC-CCCcEEEecCCCCC
Confidence 88876432211000 11223344455554 2344555555 5588888765322 34789999865 8
Q ss_pred hhhHHHHHHHHHHHhhh
Q 024997 242 QDDFDLLLHRLDELISK 258 (259)
Q Consensus 242 ~~~~~~~~~~l~~~l~~ 258 (259)
.++++.+++.|++++++
T Consensus 357 ~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 357 PADVEALTPWLDWAFER 373 (378)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987763
No 281
>PRK07678 aminotransferase; Validated
Probab=99.20 E-value=1.9e-09 Score=95.64 Aligned_cols=201 Identities=16% Similarity=0.145 Sum_probs=120.1
Q ss_pred CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCC--CC--CC-CCCCeEEEeccccccCC
Q 024997 34 DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFA--PI--PA-PADEELMIFTISKLTGH 96 (259)
Q Consensus 34 ~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~--~~--~~-~~~~~i~~~S~SK~~g~ 96 (259)
++..+ ||..| +.-.|.+. .++|+++|+++|.||++ |+.... .. .+ .+| +-+++|.+|
T Consensus 212 ~~iAA-vi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PD----ivt~gK~lg- 285 (451)
T PRK07678 212 ETIAA-VIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPD----IITMAKGIT- 285 (451)
T ss_pred CceEE-EEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCC----EEEeecccc-
Confidence 35666 45555 33334443 28999999999999998 532111 11 11 222 458899998
Q ss_pred Cc-ceEEEEEecCHHHHHHHHH------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 97 AG-SRFGWAVIKDEAVYQRMSA------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 97 ~G-~R~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
.| +.+|.+++. +++.+.+.. .....+++.+++..+++.+.|+...+ ++. .++.++.-+++.+.|+
T Consensus 286 gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~---~~~----~~~~~~~g~~l~~~l~ 357 (451)
T PRK07678 286 SAYLPLSATAVK-KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN---ENL----IERSAQLGELLLEQLK 357 (451)
T ss_pred cCCcceeEEEEc-HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh---CCH----HHHHHHHHHHHHHHHH
Confidence 67 799999999 699988763 12456788899999999888886522 222 3444555455555554
Q ss_pred hcCCCccccccccccccceeeCCCCCeeEEEecCC-------Cc---hHHHHHHHHHcCeeeecCCccc-CCCCeEEEEe
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-------EE---DKDCYGILKAAKIIGREGKKFR-AEARFVRLSL 238 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~ll~~~gi~~~~g~~f~-~~~~~~Ris~ 238 (259)
++.. .. ..+..+...|.+ .-+.+.. .+ ...+...+.++||.+.+..... ...+.+|++.
T Consensus 358 ~~~~----~~-----~~v~~vrg~Gl~-~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~P 427 (451)
T PRK07678 358 EELG----EH-----PLVGDIRGKGLL-VGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSP 427 (451)
T ss_pred HHHh----cC-----CCEEEEEeeceE-EEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEEC
Confidence 3210 00 002223333332 2333311 01 2234444557899987632111 2247899996
Q ss_pred ec--ChhhHHHHHHHHHHHhhh
Q 024997 239 LK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~~--~~~~~~~~~~~l~~~l~~ 258 (259)
.. ++++++++++++.+.+.+
T Consensus 428 pl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 428 PLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred CCcCCHHHHHHHHHHHHHHHHh
Confidence 54 999999999999998753
No 282
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.19 E-value=9.9e-10 Score=95.55 Aligned_cols=200 Identities=14% Similarity=0.072 Sum_probs=125.7
Q ss_pred CceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCC--CCCCCCCCCCeEEEeccccccCCCcceE
Q 024997 35 THLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPH--FAPIPAPADEELMIFTISKLTGHAGSRF 101 (259)
Q Consensus 35 ~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 101 (259)
++.++++..-+.-.|.+. .++|+++|+++|+||++ |+.. +..+ ...+-.--+-|+||.+| .|+.+
T Consensus 222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~-E~~gv~PDivt~aK~ig-~G~Pl 299 (447)
T COG0160 222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAF-EHFGVEPDIVTLAKSLG-GGLPL 299 (447)
T ss_pred ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhh-hhcCCCCCEEEeccccc-CCCce
Confidence 566755555565555554 28999999999999999 5322 2222 11121223678999998 59999
Q ss_pred EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 024997 102 GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAP 181 (259)
Q Consensus 102 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 181 (259)
|.++.. +++.+ ...-....+++.+++..+++.+.|+... .++. .++..+.=+++.+.|.++.. ..+.
T Consensus 300 ~avv~r-~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie---~e~L----~~~a~~~G~~l~~~L~~l~~----~~~~ 366 (447)
T COG0160 300 SAVVGR-AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIE---EENL----LERAAELGEYLRDRLEELQE----KHPL 366 (447)
T ss_pred eEEecc-HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHH---HccH----HHHHHHHHHHHHHHHHHHHh----hcCc
Confidence 999999 79988 5555555679999999999999998642 2233 33444444444444444331 1110
Q ss_pred cccccceeeCCCCCeeEEEecCC------Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHH
Q 024997 182 QYCTYFKKIRPPSPAYAWVKCER------EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLH 250 (259)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~ 250 (259)
+..++.. |.++-+.+-. .+ .+.+...+.++|+.+.. ++...+.+||.. ..++++++.+++
T Consensus 367 -----IgdVRG~-Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~---~G~~~nviRi~PPL~is~e~~d~~l~ 437 (447)
T COG0160 367 -----IGDVRGL-GLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLT---CGPHGNVLRILPPLTISDEELDEGLD 437 (447)
T ss_pred -----eeccccc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEec---cCCCCcEEEEeCCcccCHHHHHHHHH
Confidence 2222222 3344444321 22 23444445578997766 343358999996 339999999999
Q ss_pred HHHHHhhh
Q 024997 251 RLDELISK 258 (259)
Q Consensus 251 ~l~~~l~~ 258 (259)
.|.+.+.+
T Consensus 438 il~~al~~ 445 (447)
T COG0160 438 ILEEALKE 445 (447)
T ss_pred HHHHHHHh
Confidence 99998864
No 283
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.19 E-value=9.6e-10 Score=96.80 Aligned_cols=206 Identities=11% Similarity=0.030 Sum_probs=127.1
Q ss_pred ChhhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCC
Q 024997 24 EANLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADE 83 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~ 83 (259)
|.+.+++.+. ++..+ ++..| +.-.|... .++|+++|+++|+||++ |+.....+. +.. .
T Consensus 190 d~~~l~~~l~~~~~~iaa-vi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~-P 267 (428)
T PRK07986 190 DIAPFARLMAAHRHEIAA-VILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIA-P 267 (428)
T ss_pred HHHHHHHHHHhCCCcEEE-EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCC-C
Confidence 3455666662 34555 44544 33233322 38999999999999998 432221111 111 1
Q ss_pred eEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHh-----hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 024997 84 ELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY-----ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTM 157 (259)
Q Consensus 84 ~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (259)
+++ +++|.++ .| +.+|.++++ +++.+.+... ....+++.+++.-+++.+.|+...+ ++ ..+++
T Consensus 268 Di~--t~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~---~~----~~~~~ 336 (428)
T PRK07986 268 DIL--CLGKALT-GGTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES---GD----WQQQV 336 (428)
T ss_pred CEE--Eechhhh-CCcccCcchhch-HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CC----HHHHH
Confidence 333 6999997 67 588888988 6999988652 2345667788888888888875421 12 35566
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEE
Q 024997 158 KKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRL 236 (259)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ri 236 (259)
+++-+++.+.|+.+... + .+..+... |...-+.+... ....+...+.++|+.+.+. + +.+|+
T Consensus 337 ~~~g~~l~~~l~~l~~~-----~-----~i~~vRg~-Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~-----g-~~i~~ 399 (428)
T PRK07986 337 AAIEAQLREELAPLRDA-----P-----MVADVRVL-GAIGVVETTRPVNMAALQRFFVEQGVWIRPF-----G-KLIYL 399 (428)
T ss_pred HHHHHHHHHHHHHHhcC-----C-----CEEeEecc-ceEEEEEeCCcccHHHHHHHHHHCCcEEEec-----C-CEEEE
Confidence 66666666666654311 0 02222333 33333444322 2344555566789999762 2 58999
Q ss_pred Eee--cChhhHHHHHHHHHHHhhhC
Q 024997 237 SLL--KSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 237 s~~--~~~~~~~~~~~~l~~~l~~~ 259 (259)
+.. .+++++++++++|.+.+++|
T Consensus 400 ~Ppl~it~~ei~~~~~~l~~~l~~~ 424 (428)
T PRK07986 400 MPPYIILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 753 49999999999999998875
No 284
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.18 E-value=2.7e-09 Score=94.16 Aligned_cols=205 Identities=14% Similarity=0.048 Sum_probs=125.6
Q ss_pred hhhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCe
Q 024997 25 ANLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEE 84 (259)
Q Consensus 25 ~~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~ 84 (259)
.+++++.+. ++..+ |+..| ++-.|... .++|+++|+++|+||++ |+.....+. +..+ +
T Consensus 194 ~~~l~~~l~~~~~~vaa-vivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~p-D 271 (427)
T TIGR00508 194 ITPLAKLMELHSDEIAA-VILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVP-D 271 (427)
T ss_pred HHHHHHHHHhcCCcEEE-EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCC-C
Confidence 445555552 34555 55555 33333222 38999999999999998 322221111 2212 2
Q ss_pred EEEeccccccCCCcc-eEEEEEecCHHHHHHHHHhh-----hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGS-RFGWAVIKDEAVYQRMSAYI-----SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK 158 (259)
Q Consensus 85 i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (259)
|+ +++|.++ .|+ -++.++.. +++.+.+.... ...+++.+++..+++.+.++... .++ ..++++
T Consensus 272 i~--~~gK~l~-gG~~p~~a~~~~-~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~---~~~----~~~~~~ 340 (427)
T TIGR00508 272 IL--CVGKALT-GGYMTLSATVTT-DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILL---EGE----WQKQVS 340 (427)
T ss_pred EE--Eechhhh-cCcccceEEEEc-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH---hCC----HHHHHH
Confidence 33 4899996 675 67888888 69988886421 23355678888888888887542 122 356777
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEE
Q 024997 159 KRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLS 237 (259)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris 237 (259)
++-+++.+.|+++.... .+...... |...-+.+... ....+...+.++||.+.+. + +.+|++
T Consensus 341 ~~~~~l~~~L~~l~~~~----------~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~-----~-~~l~~~ 403 (427)
T TIGR00508 341 AIENQLKRELSPLRKNP----------VVKDVRVL-GAIGVVEMYKPVNVEELQKKFVEQGVWIRPF-----G-KLIYVM 403 (427)
T ss_pred HHHHHHHHHHHHhhcCC----------CEEeEecc-ccEEEEEECCccCHHHHHHHHHHCCeEEEec-----C-CEEEEE
Confidence 77777777777654210 01112222 33333444321 2344455555789998762 1 478998
Q ss_pred ee--cChhhHHHHHHHHHHHhhhC
Q 024997 238 LL--KSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 238 ~~--~~~~~~~~~~~~l~~~l~~~ 259 (259)
.. .++++++++++++.+.+++|
T Consensus 404 ppl~~t~~~id~~~~~l~~~l~~~ 427 (427)
T TIGR00508 404 PPYIITTEQLQKLTAALIEALHEE 427 (427)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcC
Confidence 75 59999999999999999876
No 285
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.17 E-value=2.3e-09 Score=96.15 Aligned_cols=196 Identities=15% Similarity=0.063 Sum_probs=120.8
Q ss_pred CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCc-ce
Q 024997 35 THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAG-SR 100 (259)
Q Consensus 35 ~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G-~R 100 (259)
+..+ ||..| ..-.|.+. .++|+++|+++|+||++ |+.-...+. +..+..--+.+++|.+| .| +.
T Consensus 260 ~iAA-vI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lg-gG~~P 337 (504)
T PLN02760 260 TIAA-FIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALS-SAYMP 337 (504)
T ss_pred ceEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEeccccc-CCccc
Confidence 4555 55555 33334443 28999999999999998 532111111 11111122788999997 56 58
Q ss_pred EEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC
Q 024997 101 FGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR 173 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 173 (259)
+|.+++. +++.+.+... ....+++.+++..+++.+.|+...+ ++ ..+++++.-+.+.+.|+.+..
T Consensus 338 igAv~~~-~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~---~~----l~~~~~~~g~~l~~~L~~l~~ 409 (504)
T PLN02760 338 IGAVLVS-PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE---RN----IPEHVNKIAPRFQDGIKAFSG 409 (504)
T ss_pred cceEeec-HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh---CC----HHHHHHHHHHHHHHHHHHHhc
Confidence 9999999 7999987642 2445778899999999888886522 12 355666666666666665421
Q ss_pred CccccccccccccceeeCCCCCeeEEEecCCC---------c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--
Q 024997 174 FSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-- 239 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-- 239 (259)
.. .+..+...| ..+-+.+... + ...+...+.++||.+.+. .+.+|++..
T Consensus 410 ~~----------~v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------g~~lrl~Ppl~ 472 (504)
T PLN02760 410 SP----------IIGEIRGTG-LILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA------GDNIMMSPPLI 472 (504)
T ss_pred CC----------CeeeEEeCc-eEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec------CCEEEEECCCC
Confidence 10 122233333 3333333211 0 123444455789998762 256899954
Q ss_pred cChhhHHHHHHHHHHHhh
Q 024997 240 KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~ 257 (259)
.++++++++++++.+.++
T Consensus 473 it~eeid~~~~~l~~al~ 490 (504)
T PLN02760 473 ITPEEVDELISIYGKALK 490 (504)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 699999999999988875
No 286
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.16 E-value=1.3e-09 Score=96.00 Aligned_cols=207 Identities=12% Similarity=0.066 Sum_probs=118.8
Q ss_pred ChhhhcccCC---CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cC-CCCCCCC--CCCCCeE
Q 024997 24 EANLWGNASS---DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FW-PHFAPIP--APADEEL 85 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~-~~~~~~~--~~~~~~i 85 (259)
|.+.|++.+. ++..+ ++..| ..-.|.+. .++|+++|+++|+||++ |. ....... +. ..++
T Consensus 187 d~~~l~~~l~~~~~~~aa-vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv-~PDi 264 (433)
T PRK00615 187 DFQIFQTVMNSLGHRVAG-VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHV-KPDI 264 (433)
T ss_pred CHHHHHHHHHhcCCceEE-EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCC-CCCe
Confidence 5667777662 34556 45555 33344433 38999999999999998 31 0000000 11 1223
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhh---hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI---SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
-+++|.+| .|+.+|+++++ +++.+.+.... ...+++.+++..+++.+.|+... .++. +++++++-+
T Consensus 265 --~~~gK~lg-gG~p~~av~~~-~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~---~~~~----~~~~~~~g~ 333 (433)
T PRK00615 265 --TVYGKILG-GGLPAAAVVAH-KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR---EQGF----YTQLSTLEQ 333 (433)
T ss_pred --EEEccccc-CCcceeeeeec-HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh---cccH----HHHHHHHHH
Confidence 36899997 67889999999 79999885322 23466778888888888887642 1222 444444444
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----------c---hHHHHHHHHHcCeeeecCCccc
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-----------E---DKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
++.+.|+++.. ..+.+ +.... .|....+.+... + ...+...+.++||.+.|..
T Consensus 334 ~l~~~l~~~~~-------~~g~~-v~~~r--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--- 400 (433)
T PRK00615 334 NFLSPIEEMIR-------SQGFP-VSLVR--YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSP--- 400 (433)
T ss_pred HHHHHHHHHHH-------HcCCC-eEEEe--eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcc---
Confidence 44444443210 00000 11122 233333333211 1 1234444556899987732
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+ .+ =+|.+++++++++.++.+.+++++
T Consensus 401 ~~-~~-~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 401 FE-AS-FLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred cc-cc-ceecCCCHHHHHHHHHHHHHHHHH
Confidence 11 11 256667999999999999998875
No 287
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.15 E-value=2.6e-09 Score=94.38 Aligned_cols=207 Identities=14% Similarity=0.122 Sum_probs=124.0
Q ss_pred ChhhhcccCC---CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCC-CC--CC-CCCCeE
Q 024997 24 EANLWGNASS---DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFA-PI--PA-PADEEL 85 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~-~~--~~-~~~~~i 85 (259)
|.+.+++.+. ++..++++.....-.|.+. .++|+++|+++|.||++ |..... .. .+ .+|
T Consensus 186 d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PD--- 262 (428)
T PRK12389 186 DIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPD--- 262 (428)
T ss_pred CHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCC---
Confidence 5677777663 3455644444344445443 38999999999999998 411100 00 01 122
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHH---hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA---YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
+-+++|.+| .|+.+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+.+. .++ ..+++++.-+
T Consensus 263 -ivt~gK~lg-gG~Pi~av~~~-~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~---~~~----l~~~~~~~g~ 332 (428)
T PRK12389 263 -LTALGKIIG-GGLPIGAYGGR-KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQ---QEG----VYEKLDRLGA 332 (428)
T ss_pred -eeeechhhc-CCCceeEEeEH-HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHh---ccc----HHHHHHHHHH
Confidence 458999997 78999999998 799988753 2234567889999888888888642 122 3445556666
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC--CC---------c---hHHHHHHHHHcCeeeecCCccc
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE--RE---------E---DKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~---~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
++.+.|+++.. ..+ . ........ |++ -+.+. .. + ...+...+.++||.+.+..
T Consensus 333 ~l~~~L~~l~~----~~~---~-~~~v~r~~-g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--- 399 (428)
T PRK12389 333 MLEEGILEAAE----KHG---I-TITINRLK-GAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK--- 399 (428)
T ss_pred HHHHHHHHHHH----hCC---C-CEEEEecC-cEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC---
Confidence 66666654320 000 0 01111222 222 12111 00 1 2344455557899998731
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+.+++..++++++++++++.+.+++
T Consensus 400 --~~~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 400 --YEAWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred --CCCeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 1235677767999999999999998864
No 288
>PRK07046 aminotransferase; Validated
Probab=99.13 E-value=3.9e-09 Score=93.63 Aligned_cols=209 Identities=10% Similarity=-0.021 Sum_probs=121.1
Q ss_pred ChhhhcccCC-CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccc
Q 024997 24 EANLWGNASS-DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTIS 91 (259)
Q Consensus 24 d~~~l~~~~~-~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~S 91 (259)
|++.+++.+. ++..+ +|..| ..-.|.+. .++|+++|+++|.||+. |.-.........+-.--+-+++
T Consensus 206 d~~~l~~~l~~~~vAa-vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~g 284 (453)
T PRK07046 206 DLAALEAALADGDVAA-VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVVG 284 (453)
T ss_pred CHHHHHHHhCCCCeEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceeeh
Confidence 6777888774 35566 55555 33234333 28999999999999997 3111111111011111144789
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHh---------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 92 KLTGHAGSRFGWAVIKDEAVYQRMSAY---------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
|.+| .|+.+|.+++. +++.+.+... ....+++.+++..+++.+.|+.+. .++. .+++++.-+
T Consensus 285 K~lg-gG~Pi~av~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~---~~~~----~~~~~~~g~ 355 (453)
T PRK07046 285 KPIA-GGVPCAVYGFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVM---TEAA----YAHMLALAA 355 (453)
T ss_pred hhhc-CCCcceeeeeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHh---cccH----HHHHHHHHH
Confidence 9998 78999999999 7999887642 123467788999888888888652 2233 344444444
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec-CC-C----------ch---HHHHHHHHHcCeeeecCCcc
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC-ER-E----------ED---KDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~----------~~---~~~~~ll~~~gi~~~~g~~f 227 (259)
.+.+.|+++.. ..+. ...+...+.++ .+.+ ++ . +. ..+...+.++||.+.|.
T Consensus 356 ~l~~~L~~l~~-------~~~~--~~~v~g~G~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~--- 422 (453)
T PRK07046 356 RLAAGLRAVIA-------RHGL--PWHVTRVGARV-EFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF--- 422 (453)
T ss_pred HHHHHHHHHHH-------hCCC--CeEEEEeCcEE-EEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc---
Confidence 44444443210 0000 11112222222 1211 10 0 11 12223334589998761
Q ss_pred cCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 228 RAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 228 ~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.++++...++++++++++++.+.+.+
T Consensus 423 ---~~~~~~~p~~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 423 ---HNMMLVCPATTAADVDRLVAAFDACLGE 450 (453)
T ss_pred ---cCcEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 1457888877999999999999988753
No 289
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.12 E-value=4.4e-09 Score=92.58 Aligned_cols=202 Identities=13% Similarity=0.048 Sum_probs=124.5
Q ss_pred hhcccCCCCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEec
Q 024997 27 LWGNASSDTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFT 89 (259)
Q Consensus 27 ~l~~~~~~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S 89 (259)
.+++.+.++..+++ ..| +.-.|... .++|+++|+++|+||++ |+.....+. +.. .+ +-+
T Consensus 192 ~~~~~~~~~iAAvi-~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~-PD--i~t 267 (422)
T PRK05630 192 SLELLIDETVAAII-IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVT-PD--IMC 267 (422)
T ss_pred HHHHHHhhceEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCC-CC--eee
Confidence 34444455677744 445 44445443 28999999999999998 432221111 111 12 238
Q ss_pred cccccCCCc-ceEEEEEecCHHHHHHHHHh------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 90 ISKLTGHAG-SRFGWAVIKDEAVYQRMSAY------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 90 ~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
++|.++ .| ..+|+++++ +++.+.+... ....+++.+++.-+++.+.++...+ ++. +++++++-.
T Consensus 268 ~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~---~~~----~~~~~~~g~ 338 (422)
T PRK05630 268 VGKALT-GGFMSFAATLCT-DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET---GMW----RKQVKRIEA 338 (422)
T ss_pred eechhh-cCccccceeecc-HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh---CcH----HHHHHHHHH
Confidence 899985 56 478999999 6998887532 2345677888888888888876421 122 345555555
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-- 239 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-- 239 (259)
++.+.|+.+.. .+ .+..+... |...-+.+... +...+...+.++|+.+.+. + +.+|+...
T Consensus 339 ~l~~~L~~l~~-----~~-----~v~~vRg~-Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~-----g-~~l~~~PpL~ 401 (422)
T PRK05630 339 ELIAGLSPLAH-----LP-----GVADVRVL-GAIGVVEMEQPVDMEEATQAAVDHGVWLRPF-----G-RLVYVMPPYI 401 (422)
T ss_pred HHHHHHHHhhc-----CC-----Ceeeeecc-ccEEEEEECCcccHHHHHHHHHHCCeEEEec-----C-CEEEEECCcc
Confidence 56665554321 00 02222322 44445555432 2344555566789998762 2 68899874
Q ss_pred cChhhHHHHHHHHHHHhhh
Q 024997 240 KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++++++++|.+.++.
T Consensus 402 it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 402 TTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 3999999999999998864
No 290
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.12 E-value=2.9e-09 Score=94.28 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=120.8
Q ss_pred hhhcccCC----CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeE
Q 024997 26 NLWGNASS----DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEEL 85 (259)
Q Consensus 26 ~~l~~~~~----~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i 85 (259)
+.|++.+. ++..+ ++..| ..-.|.+. .++|+++|+++|+||++ |+.....+. +.. .+
T Consensus 202 ~~le~~l~~~~~~~~aa-vivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~-PD- 278 (442)
T PRK13360 202 DELERLVTLHDASTIAA-VIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT-PD- 278 (442)
T ss_pred HHHHHHHHhcCCCcEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC-Cc-
Confidence 35666552 34555 45555 44444443 28999999999999998 532111111 111 12
Q ss_pred EEeccccccCCCc-ceEEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 024997 86 MIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTM 157 (259)
Q Consensus 86 ~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (259)
+-+++|.++ .| +.+|.++++ +++.+.+... ....+++.+++.-+++.+.|+...+ ++ ..++.
T Consensus 279 -ivt~gK~l~-gG~~P~gav~~~-~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~---~~----l~~~~ 348 (442)
T PRK13360 279 -LLTCAKGLT-NGAIPMGAVFVS-SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER---EG----LLTRA 348 (442)
T ss_pred -eeeeeeccc-cCccceEEEEEc-HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh---CC----HHHHH
Confidence 448999997 56 789999998 6998877531 2335677788888888888875421 12 34556
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---C---chHHHHHHHHHcCeeeecCCcccCCC
Q 024997 158 KKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---E---EDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
++.-+++.+.|+++..... +..+...| ...-+.+.. . ....+...+.++||.+.+. .
T Consensus 349 ~~~g~~l~~~l~~l~~~~~----------v~~vrG~G-l~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~------~ 411 (442)
T PRK13360 349 ARLAPYWEDALHSLRDAPH----------VIDIRNLG-LVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT------G 411 (442)
T ss_pred HHHHHHHHHHHHHhhcCCC----------eeeeeccc-eEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec------C
Confidence 6666666666665432100 11122222 222222211 1 1122333445689998762 2
Q ss_pred CeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+||+. ..+++++++++++|.+.+++
T Consensus 412 ~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 412 DILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred CEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 5799995 34999999999999998763
No 291
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.12 E-value=4.9e-09 Score=93.09 Aligned_cols=198 Identities=12% Similarity=0.026 Sum_probs=115.0
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCc
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAG 98 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G 98 (259)
++..++++..-+--.|.+. .++|+++|+++|+||++ |+.....+. +.. .++ -+++|.++ .|
T Consensus 221 ~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~-PDi--v~~gK~l~-gG 296 (457)
T PRK05639 221 DEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVK-PDL--IIFGKGVA-SG 296 (457)
T ss_pred CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCC-CCE--EEechhhc-CC
Confidence 3566644443343334433 28999999999999998 432211111 111 233 33899997 68
Q ss_pred ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 024997 99 SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQE 178 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 178 (259)
+.+|.+++. +++.+.. ......+.+.+++.-+++.+.++...+ ++. .+..++.-+++.+.|+++.. .
T Consensus 297 ~pi~av~~~-~~i~~~~-~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~l----~~~~~~~g~~l~~~L~~l~~----~ 363 (457)
T PRK05639 297 MGLSGVIGR-KELMDLT-SGSALLTPAANPVISAAAEATLEIIEE---ENL----LKNALKVGEFIKKRLLEMKE----S 363 (457)
T ss_pred CcceeEEeh-HHHHhhc-CCCcccCCCcCHHHHHHHHHHHHHHHH---ccH----HHHHHHHHHHHHHHHHHHHH----h
Confidence 899999999 6988832 212234677888888888888875422 222 34444455555555554320 0
Q ss_pred ccccccccceeeCCCCCeeEEEecCC----Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHH
Q 024997 179 IAPQYCTYFKKIRPPSPAYAWVKCER----EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLL 249 (259)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~ 249 (259)
. ..+..+...| ..+-+.+.. .+ ...+...+.++|+.+.+. +...+.+|++..- +++++++++
T Consensus 364 ~-----~~~~~VrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---g~~~~~lr~~Ppl~it~~~id~~~ 434 (457)
T PRK05639 364 F-----EVIGDVRGKG-LMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY---GMFGNVIRITPPLVITKEIAEKGL 434 (457)
T ss_pred C-----CCEEeeccce-eEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec---CCCCCEEEEeCCCccCHHHHHHHH
Confidence 0 0022223332 223333311 01 223444455689998763 2234789999743 999999999
Q ss_pred HHHHHHhh
Q 024997 250 HRLDELIS 257 (259)
Q Consensus 250 ~~l~~~l~ 257 (259)
++|.+.++
T Consensus 435 ~~l~~~l~ 442 (457)
T PRK05639 435 EIMERAIK 442 (457)
T ss_pred HHHHHHHH
Confidence 99998875
No 292
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.12 E-value=4.5e-09 Score=92.67 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=124.9
Q ss_pred hhhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCe
Q 024997 25 ANLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEE 84 (259)
Q Consensus 25 ~~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~ 84 (259)
.+.|++.+. ++..+ ++..| +.-.|.+. .++|+++|+++|+||++ |+.....+. +.. .+
T Consensus 193 l~~l~~~i~~~~~~iAA-vi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~-PD 270 (429)
T PRK06173 193 IEPLQDLLEQKGDEIAA-LILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVV-PD 270 (429)
T ss_pred HHHHHHHHHhCCCcEEE-EEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCC-CC
Confidence 344556552 35666 44455 44444443 28999999999999998 432221111 111 22
Q ss_pred EEEeccccccCCCc-ceEEEEEecCHHHHHHHHH-----hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA-----YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK 158 (259)
Q Consensus 85 i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (259)
|+ +++|.++ .| +-+|.++.. +++.+.+.. .....+++.+++.-+++.+.|+...+ ++ ..++++
T Consensus 271 iv--~~gK~l~-gG~~p~~a~~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~---~~----~~~~~~ 339 (429)
T PRK06173 271 IM--CIGKALT-GGYLTLSATITT-EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE---SP----WQQNIQ 339 (429)
T ss_pred EE--Eeehhhh-CCccccceEEec-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CC----HHHHHH
Confidence 33 4999996 67 478888888 698887753 12334566788888888888875421 12 255666
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEE
Q 024997 159 KRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLS 237 (259)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris 237 (259)
++-+.+.+.|+.+.+. + .+..+... |...-+.+... ....+.+.+.++||.+.+. + +.+|+.
T Consensus 340 ~~g~~l~~~L~~~~~~-----~-----~v~~vRg~-Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~-----g-~~l~~~ 402 (429)
T PRK06173 340 RIEAQLKQELAPAAEF-----D-----SVAEVRVL-GAIGVVEMKEPVNMATLQPRFVEHGIWVRPF-----G-KLVYIM 402 (429)
T ss_pred HHHHHHHHHHHHhhcC-----C-----Ceeeeecc-ceEEEEEeCCcccHHHHHHHHHHCCeEEEec-----C-CEEEEe
Confidence 6666677777643211 0 02112222 33344444432 2344555566789999762 2 589999
Q ss_pred ee--cChhhHHHHHHHHHHHhhh
Q 024997 238 LL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 238 ~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
.. .+++++++++++|.+.+.+
T Consensus 403 Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 403 PPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred CCccCCHHHHHHHHHHHHHHHHH
Confidence 74 3999999999999998864
No 293
>PRK07482 hypothetical protein; Provisional
Probab=99.12 E-value=4.7e-09 Score=93.41 Aligned_cols=210 Identities=13% Similarity=0.059 Sum_probs=121.4
Q ss_pred hhhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEe
Q 024997 25 ANLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIF 88 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~ 88 (259)
.+.|++.+. ++..+|++.....-.|.+. .++|+++|+++|.||++ |+.....+. ...+..=-+-
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv 285 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI 285 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence 355666552 3456644443343334443 28999999999999998 532211111 1111111145
Q ss_pred ccccccCCCcc-eEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 89 TISKLTGHAGS-RFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 89 S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+++|.++ .|. .+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+...+ ++. .+..++.
T Consensus 286 ~~gKgl~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~---~~l----~~~~~~~ 356 (461)
T PRK07482 286 TVAKGLT-SAYAPLSGSIVG-EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER---ENL----VGNAAEV 356 (461)
T ss_pred EEccccc-cCccccceeeec-HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCH----HHHHHHH
Confidence 5799997 675 89999988 688887752 12345778899999999888886522 233 3344444
Q ss_pred HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-------c-----hHHHHHHHHHcCeeeecCCccc
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-------E-----DKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
-+.+.+.|+++.. .. ..+..+... |...-+.+... + ...+...+.++||.++++.
T Consensus 357 g~~l~~~L~~l~~----~~-----~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~--- 423 (461)
T PRK07482 357 GAYFRARLRAAFG----DH-----PLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP--- 423 (461)
T ss_pred HHHHHHHHHHHHh----cC-----CCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC---
Confidence 4555555543210 00 002222333 33333433210 0 1234444557899886521
Q ss_pred CCCCeEEEEe--ecChhhHHHHHHHHHHHhh
Q 024997 229 AEARFVRLSL--LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~ 257 (259)
..+.+|+.. ..++++++++++++.+.++
T Consensus 424 -~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~ 453 (461)
T PRK07482 424 -HGDILGFAPPLVLTRAEADEIVAIAKDAVD 453 (461)
T ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 136789874 4599999999999998875
No 294
>PRK04311 selenocysteine synthase; Provisional
Probab=99.11 E-value=1.4e-08 Score=90.01 Aligned_cols=241 Identities=15% Similarity=0.057 Sum_probs=139.2
Q ss_pred hhhhccCccccc----ccChhhhcccCCCCceEEEEcCCCCC--Chh--hH-----HHhhcCCCcEEEeeccc--c----
Q 024997 10 QTDYFESVDYKF----EGEANLWGNASSDTHLVEFVTAPNNP--DGQ--MN-----KAVLKGPYAKSIYDHAY--F---- 70 (259)
Q Consensus 10 ~~~~~g~~~~~~----~~d~~~l~~~~~~~~~~i~i~~p~NP--tG~--~~-----~~la~~~~~~vi~De~y--~---- 70 (259)
..+..|.+...+ ..++++++++++++++++++++++|| +|. .. .++|+++|+++|+|.+. +
T Consensus 187 ~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~ 266 (464)
T PRK04311 187 VMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLS 266 (464)
T ss_pred HHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccch
Confidence 344456654222 24567889999999999999999998 452 22 48999999999999953 1
Q ss_pred --CCCCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 71 --WPHFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 71 --~~~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
+....+.. ...+.+++++|.+|.+|.+ ..|++++. ++++++++.........+......+..+.+....+..
T Consensus 267 ~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~-~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~ 343 (464)
T PRK04311 267 QYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGK-KELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPE 343 (464)
T ss_pred hccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEc-HHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChh
Confidence 10011111 1245689999999998745 48999998 7999887742221122233333333333333221110
Q ss_pred -------CcchHHHHHHHHHHHHHHHHHHHHhcCC--CccccccccccccceeeCCC--CCeeEEEecCCCchHHHHHHH
Q 024997 146 -------GNNIFEFGYNTMKKRWENLSKIISLSNR--FSLQEIAPQYCTYFKKIRPP--SPAYAWVKCEREEDKDCYGIL 214 (259)
Q Consensus 146 -------~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ll 214 (259)
....+....++++++...+.+.|+.... +.....+....-.-...+.. -.+-+.++....+.+.+.+.|
T Consensus 344 ~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~l 423 (464)
T PRK04311 344 KLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARL 423 (464)
T ss_pred hhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHH
Confidence 0112445567888899999999987541 11111111000000000111 112223333333567777788
Q ss_pred HHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 215 KAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
++....+.. ....+.+.+-+-. .+++++..++++++++.
T Consensus 424 r~~~~~i~~----r~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 424 RLLPPPVIG----RIEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred hcCCCCEEE----EEECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 765543332 1235777888755 88899999999998764
No 295
>PRK06062 hypothetical protein; Provisional
Probab=99.11 E-value=5.4e-09 Score=92.79 Aligned_cols=204 Identities=13% Similarity=0.031 Sum_probs=119.1
Q ss_pred hhhhcccCC----CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCC
Q 024997 25 ANLWGNASS----DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADE 83 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~ 83 (259)
++.|++.+. ++..+ ++..| ..-.|.+. .++|+++|+++|+||++ |+.....+. + .+|
T Consensus 200 ~~~le~~l~~~~~~~iAa-viiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD- 277 (451)
T PRK06062 200 LAHLERVIELEGPSTIAA-ILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD- 277 (451)
T ss_pred HHHHHHHHHhcCCCceEE-EEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC-
Confidence 345666552 34556 44455 33334443 28999999999999998 532211110 1 222
Q ss_pred eEEEeccccccCCCcc-eEEEEEecCHHHHHHHHHh--hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 84 ELMIFTISKLTGHAGS-RFGWAVIKDEAVYQRMSAY--ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 84 ~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+-+++|.+| .|. .+|.+++. +++.+.+... ....+++.+++.-+++.+.|+...+ ++. .++.++.
T Consensus 278 ---i~t~gK~lg-gG~~Pigav~~~-~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l----~~~~~~~ 345 (451)
T PRK06062 278 ---LITFAKGVN-SGYVPLGGVAIS-EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE---EGI----VENAARI 345 (451)
T ss_pred ---eeeechhhh-cCCcCcEEEEEc-HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCH----HHHHHHH
Confidence 568999997 674 89999999 6998887532 2345677888888888888876422 122 3333333
Q ss_pred H-HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C-------------chHHHHHHHHHcCeeeecC
Q 024997 161 W-ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E-------------EDKDCYGILKAAKIIGREG 224 (259)
Q Consensus 161 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~~ll~~~gi~~~~g 224 (259)
- .++.+.|+++.. ..+ .+..+...| .+.-+.+.. . ....+...+.++||.+.+
T Consensus 346 G~~~l~~~L~~l~~----~~~-----~v~~vrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~- 414 (451)
T PRK06062 346 GAEVLGPGLRELAE----RHP-----SVGEVRGLG-VFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV- 414 (451)
T ss_pred HHHHHHHHHHHHHh----cCC-----cEEeEeccc-cEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee-
Confidence 2 234444443321 000 011222232 222222210 0 022344455578998765
Q ss_pred CcccCCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 225 KKFRAEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 225 ~~f~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
. .+.+||+. ..++++++++++++.+.+++
T Consensus 415 ----~-~~~lrl~ppl~~t~~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 415 ----N-GNRIHVVPPCTVTEDEVREGLAILDAALAV 445 (451)
T ss_pred ----c-CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 1 36789987 44999999999999988763
No 296
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=3.2e-08 Score=84.58 Aligned_cols=231 Identities=14% Similarity=0.112 Sum_probs=153.4
Q ss_pred hhhhhhccCcc----ccc--ccChhhhcccCC--CCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCC
Q 024997 8 QEQTDYFESVD----YKF--EGEANLWGNASS--DTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPH 73 (259)
Q Consensus 8 ~~~~~~~g~~~----~~~--~~d~~~l~~~~~--~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~ 73 (259)
..+++..|.++ ..| .+|++++++.++ ++.+++.+++.--+||...+ ++|+++|.++|+|.+- ++..
T Consensus 96 ~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~ 175 (383)
T COG0075 96 AEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGE 175 (383)
T ss_pred HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCc
Confidence 34555566654 234 688899999995 46778888888889999983 8899999999999855 3322
Q ss_pred CCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHh---------------h-h--hhcCCCCHHHHHHH
Q 024997 74 FAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAY---------------I-S--LNTMGVSRECQLRA 134 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~---------------~-~--~~~~~~~~~~q~~~ 134 (259)
...+ +.++-++++.+.=|.++ .|| +|.+..+ ++.++.+... . . ....-++...-++.
T Consensus 176 ~~~v-d~wgiDv~itgSQK~l~~PPG--la~v~~S-~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL 251 (383)
T COG0075 176 PLKV-DEWGIDVAITGSQKALGAPPG--LAFVAVS-ERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYAL 251 (383)
T ss_pred ccch-hhcCccEEEecCchhccCCCc--cceeEEC-HHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHH
Confidence 2222 56778899999999995 689 8889988 5766665432 1 1 11122333333455
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYG 212 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 212 (259)
..+++..++. . ++.+.++++++.+.++..++.++- .. +..-...+.....+..+.. +.+....
T Consensus 252 ~~al~~i~~E---G-le~r~~RH~~~~~a~r~~~~alGl---~~--------~~~~~~~s~tvta~~~P~g~~~~~~~~~ 316 (383)
T COG0075 252 REALDLILEE---G-LEARIARHRRLAEALRAGLEALGL---EL--------FADPERRSPTVTAIKVPEGVDDKKVRRA 316 (383)
T ss_pred HHHHHHHHHh---h-HHHHHHHHHHHHHHHHHHHHHcCC---cc--------ccCcccCCCceEEEECCCCCCcHHHHHH
Confidence 5666654322 2 677888999999999999998762 11 1101122333444555543 3345557
Q ss_pred HHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+++++|+.+.+|..-- ....+||+... ++.++..++..|...+.+
T Consensus 317 ~~~~~g~~i~gg~~~l-~gkifRIGhMG~~~~~dv~~~l~ale~~L~~ 363 (383)
T COG0075 317 LLKEYGVEIAGGQGPL-KGKIFRIGHMGNVRPEDVLAALAALEAALRE 363 (383)
T ss_pred HHHhCCEEeccccccc-CccEEEEecCccCCHHHHHHHHHHHHHHHHH
Confidence 8888899988765333 34789999743 889999999999887754
No 297
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.09 E-value=5.2e-09 Score=93.13 Aligned_cols=210 Identities=12% Similarity=0.115 Sum_probs=121.3
Q ss_pred ChhhhcccCC---CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCCCCCCCeEEEe
Q 024997 24 EANLWGNASS---DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIPAPADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~~~~~~~i~~~ 88 (259)
|++.|++.+. ++..+ +|..| ..-.|.+. .++|+++|+++|+||++ |...........+..--+.
T Consensus 232 d~~~l~~~l~~~~~~iAa-vI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~ 310 (474)
T PLN02482 232 DLEAVKKLFEANKGEIAA-VILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLT 310 (474)
T ss_pred ChHHHHHHHHhCCCceEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEE
Confidence 6677777763 34555 55555 34344443 28999999999999998 3110000000001011146
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHh---hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAY---ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
+++|.+| .|+.+|.+++. +++.+.+... ....+++.+++..+++.+.|+.+. .++ ..+++.++-+++.
T Consensus 311 t~gK~lg-gG~Pigav~g~-~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~---~~~----~~~~~~~~g~~l~ 381 (474)
T PLN02482 311 TLGKVIG-GGLPVGAYGGR-REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQ---QPG----TYEYLDKITKKLI 381 (474)
T ss_pred Eecchhh-CCCceEEEEEc-HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHh---ccC----HHHHHHHHHHHHH
Confidence 8899998 78999999988 7999987532 233466678888888888887641 122 3556666666666
Q ss_pred HHHHhcCCCccccccccccccceee-CCCCCee-EEEecC---------CCc---hHHHHHHHHHcCeeeecCCcccCCC
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKI-RPPSPAY-AWVKCE---------REE---DKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~---------~~~---~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
+.|+++.. . .+ +... ...++++ +.+.-. ..+ ...+...+.++||.+.|.. +. .
T Consensus 382 ~~L~~l~~----~---~g---~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~-~~--~ 448 (474)
T PLN02482 382 QGILEAGK----K---AG---HEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQ-FE--A 448 (474)
T ss_pred HHHHHHHH----h---cC---CCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccC-CC--C
Confidence 66665421 0 00 0111 1222222 111110 011 1223334446899987721 11 1
Q ss_pred CeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+. +++..++++++++++++.+++.+
T Consensus 449 ~~--psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 449 GF--TSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred Cc--CCCCCCHHHHHHHHHHHHHHHHh
Confidence 11 56667999999999999998864
No 298
>PRK05965 hypothetical protein; Provisional
Probab=99.09 E-value=7.9e-09 Score=91.94 Aligned_cols=208 Identities=11% Similarity=0.081 Sum_probs=124.8
Q ss_pred hhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEec
Q 024997 26 NLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFT 89 (259)
Q Consensus 26 ~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S 89 (259)
+.+++.+. ++..++++...+.-.|.+. .++|+++|+++|.||++ |+.....+. +..+..=-+-+
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 281 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT 281 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence 34565552 3566645444444445444 28999999999999998 532211111 11111112667
Q ss_pred cccccCCCc-ceEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 90 ISKLTGHAG-SRFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 90 ~SK~~g~~G-~R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
++|.++ .| +.+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+... .++ ..++.++.-
T Consensus 282 ~gKgl~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~---~~~----l~~~~~~~g 352 (459)
T PRK05965 282 VAKGLT-SGYVPMGAVLMS-DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH---EGG----LLANGQKAG 352 (459)
T ss_pred echhhc-cCCcceeEEEEc-HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH---hcc----HHHHHHHHH
Confidence 799997 78 599999999 699887753 2344578889998888888887542 122 244455555
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C--------c---hHHHHHHHHHcCeeeecCCcccC
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E--------E---DKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~---~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
+++.+.|+++... ..+..+...| ..+-+.+.. . + ...+...+.++||.+.+ .
T Consensus 353 ~~l~~~l~~l~~~----------~~v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~-----~ 416 (459)
T PRK05965 353 PRFAAGLDALRAH----------PLVGDVRGRG-LLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA-----F 416 (459)
T ss_pred HHHHHHHHhhccC----------CCEEEEeecc-eEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe-----c
Confidence 5666666554211 0122233333 333333311 0 0 12344445578999875 2
Q ss_pred CCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+|++.. .++++++++++++.+.+++
T Consensus 417 g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 417 GDGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred CCcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 3467888853 4999999999999988753
No 299
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.08 E-value=4.6e-09 Score=93.08 Aligned_cols=203 Identities=13% Similarity=0.107 Sum_probs=124.3
Q ss_pred hhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCeE
Q 024997 26 NLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEEL 85 (259)
Q Consensus 26 ~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~i 85 (259)
+.+++.+. ++..++++.....-.|.+. .++|+++|+++|+||++ |+.....+. + .+|
T Consensus 205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD--- 281 (445)
T PRK09221 205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD--- 281 (445)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC---
Confidence 34555552 3455645444454445544 28999999999999998 532111111 1 122
Q ss_pred EEeccccccCCCc-ceEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 024997 86 MIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTM 157 (259)
Q Consensus 86 ~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (259)
+-++||.++ .| +.+|.++++ +++.+.+.. .....+++.+++.-+++.+.|+...+ ++ ..++.
T Consensus 282 -i~~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~---~~----l~~~~ 351 (445)
T PRK09221 282 -IITFAKGLT-NGAIPMGAVIAS-DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE---ED----LFERA 351 (445)
T ss_pred -EEEeccccc-cCcccceeeEEc-HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh---cc----HHHHH
Confidence 568999997 56 678999998 699887753 12334677788888888887775421 12 35667
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC------chHHHHHHHHHcCeeeecCCcccCCC
Q 024997 158 KKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------EDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
++.-+.+.+.|+++.... .+..+... |...-+.+... ....+.+.+.++||.++++ .
T Consensus 352 ~~~g~~l~~~l~~l~~~~----------~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------~ 414 (445)
T PRK09221 352 AELAPYFEDAVHSLKGLP----------HVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT------G 414 (445)
T ss_pred HHHHHHHHHHHHhhccCC----------CEEEEecC-ceEEEEEEecccccccchHHHHHHHHHHCCeEEeec------C
Confidence 777777777777653211 02222222 23233333211 1123334455789998752 2
Q ss_pred CeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+||+.. .+++++++++++|++.+.+
T Consensus 415 ~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 415 DTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 67999953 4999999999999998863
No 300
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.08 E-value=8.8e-09 Score=91.45 Aligned_cols=203 Identities=10% Similarity=0.060 Sum_probs=124.5
Q ss_pred hhhcccCC---CCceEEEEcC-CCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCeE
Q 024997 26 NLWGNASS---DTHLVEFVTA-PNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEEL 85 (259)
Q Consensus 26 ~~l~~~~~---~~~~~i~i~~-p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~i 85 (259)
+.+++.+. ++..+|++.- .+.-.|.+. .++|+++|+++|.||++ |+.....+. + .+|
T Consensus 209 ~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PD--- 285 (453)
T PRK06943 209 ADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPD--- 285 (453)
T ss_pred HHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCC---
Confidence 45555552 4566644443 144445444 28999999999999998 532211111 1 222
Q ss_pred EEeccccccCCCc-ceEEEEEecCHHHHHHHHH------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 024997 86 MIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK 158 (259)
Q Consensus 86 ~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (259)
+-+++|.++ .| +.+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+... .++. .++.+
T Consensus 286 -ivt~gKgl~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~---~~~l----~~~~~ 355 (453)
T PRK06943 286 -FLCLSKGIS-GGYLPLSLVLSR-DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFA---EDDV----LARNA 355 (453)
T ss_pred -eEeeehhhc-cCcccceEEEEc-HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHH---hcCH----HHHHH
Confidence 556699998 78 599999999 699887753 1234577889999888888888652 2233 34455
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC-CC--c---hHHHHHHHHHcCeeeecCCcccCCCC
Q 024997 159 KRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE-RE--E---DKDCYGILKAAKIIGREGKKFRAEAR 232 (259)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~---~~~~~~ll~~~gi~~~~g~~f~~~~~ 232 (259)
+.-+++.+.|+++... + .+..+... |...-+.+. +. + ...+...+.++||.+.+. + +
T Consensus 356 ~~G~~l~~~L~~l~~~-----~-----~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~-----g-~ 418 (453)
T PRK06943 356 RKSARLRAALAPLAAH-----P-----QVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI-----G-T 418 (453)
T ss_pred HHHHHHHHHHHHHhcC-----C-----CEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec-----C-C
Confidence 5555555555544210 0 02223333 333344443 11 1 123444455789998762 2 4
Q ss_pred eEEEE--eecChhhHHHHHHHHHHHhhh
Q 024997 233 FVRLS--LLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 233 ~~Ris--~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+|++ +..+++++++++++|.+.+++
T Consensus 419 ~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 419 TVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 68999 455999999999999988763
No 301
>PRK07481 hypothetical protein; Provisional
Probab=99.07 E-value=1.2e-08 Score=90.70 Aligned_cols=200 Identities=14% Similarity=0.076 Sum_probs=118.4
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCc-ce
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAG-SR 100 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G-~R 100 (259)
++..+|++...+.-.|.+. .++|+++|+++|.||++ |+.....+. ...+..--+-+++|.++ .| +.
T Consensus 212 ~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~-gG~~P 290 (449)
T PRK07481 212 DTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGIT-SGYVP 290 (449)
T ss_pred CcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeeccc-CCCcC
Confidence 3466644443343334433 38999999999999998 532111111 11111111566799997 67 58
Q ss_pred EEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC
Q 024997 101 FGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR 173 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 173 (259)
+|.+++. +++.+.+... ....+++.+++.-+++.+.|+... .++ ..++.++.-+++.+.|+++..
T Consensus 291 i~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~---~~~----l~~~~~~~g~~l~~~L~~l~~ 362 (449)
T PRK07481 291 LGATMVN-ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVV---RED----LPANAAKRGAYLLEGLQPLKE 362 (449)
T ss_pred ceEEEEc-HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHH---hhh----HHHHHHHHHHHHHHHHHHHhh
Confidence 9999999 6998887532 234577889998888888887542 122 344555555556666655421
Q ss_pred CccccccccccccceeeCCCCCeeEEEecCCC-------c-----hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--
Q 024997 174 FSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-------E-----DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-- 239 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-- 239 (259)
..+ .+..+... |..+.+.+... + ...+...+.++||.+.+. + +.+||+..
T Consensus 363 ----~~~-----~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----g-~~i~l~Ppl~ 426 (449)
T PRK07481 363 ----RFE-----LVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS-----G-TKIILSPPLV 426 (449)
T ss_pred ----cCC-----CeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec-----C-CEEEEECCCC
Confidence 000 02222333 33334443210 0 123334455789999772 2 45899854
Q ss_pred cChhhHHHHHHHHHHHhhh
Q 024997 240 KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~ 258 (259)
.++++++++++++.+.+++
T Consensus 427 it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 427 IQREDVDRIVDALDAGLSA 445 (449)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4999999999999998764
No 302
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.07 E-value=3.9e-08 Score=87.02 Aligned_cols=116 Identities=13% Similarity=0.057 Sum_probs=77.4
Q ss_pred CCCcccchhhhhhccCcc-------cccccChhhhcccCCCCceEEEEcCC-CCCChhh-HHHhhcCCCcEEEeeccc-c
Q 024997 1 MPFYPLYQEQTDYFESVD-------YKFEGEANLWGNASSDTHLVEFVTAP-NNPDGQM-NKAVLKGPYAKSIYDHAY-F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~-------~~~~~d~~~l~~~~~~~~~~i~i~~p-~NPtG~~-~~~la~~~~~~vi~De~y-~ 70 (259)
+|+|+.+...+...|.++ ..|.+|++.+++.+++++++|+++++ +||.-.- +.++|+++|++||+|+++ +
T Consensus 118 ~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~~G~p~dl~~I~~la~~~gi~vIeDaa~a~ 197 (438)
T PRK15407 118 AAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAHTLGNPFDLAAVKAFCDKHNLWLIEDNCDAL 197 (438)
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCCCCChhhHHHHHHHHHHCCCEEEEECccch
Confidence 478888888888888764 23678899999999889999888875 4554221 148999999999999998 3
Q ss_pred CCCCCCC-CCCCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhh
Q 024997 71 WPHFAPI-PAPADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYI 119 (259)
Q Consensus 71 ~~~~~~~-~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~ 119 (259)
+.....- .+... .+.+.||. |.+. +|= -|+++++++++.+.++.+.
T Consensus 198 G~~~~g~~~G~~g-d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~ 246 (438)
T PRK15407 198 GSTYDGRMTGTFG-DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFR 246 (438)
T ss_pred hhhcCCeeeeccC-ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHH
Confidence 2111110 11111 44556664 5553 222 3999999878877666544
No 303
>PRK06105 aminotransferase; Provisional
Probab=99.06 E-value=1.4e-08 Score=90.38 Aligned_cols=207 Identities=14% Similarity=0.054 Sum_probs=124.3
Q ss_pred hhhcccC---C-CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEec
Q 024997 26 NLWGNAS---S-DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFT 89 (259)
Q Consensus 26 ~~l~~~~---~-~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S 89 (259)
+++++.+ . ++..+|++..-+.-.|.+. .++|+++|+++|+||++ |+.....+. ...+-.--+-+
T Consensus 205 ~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~ 284 (460)
T PRK06105 205 NELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV 284 (460)
T ss_pred HHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee
Confidence 3455555 2 3456644443344344443 28999999999999998 532111111 11111111568
Q ss_pred cccccCCCc-ceEEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 90 ISKLTGHAG-SRFGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 90 ~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
++|.++ .| +.+|.+++. +++.+.+... ....+++.+++.-+++.+.|+...+ ++ ..+..++.-
T Consensus 285 ~gK~lg-gG~~P~~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~----l~~~v~~~g 355 (460)
T PRK06105 285 MSKQLS-SSYQPLSAVLMN-EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE---RD----LVGNAAERG 355 (460)
T ss_pred eecccc-cCcccceEEEEc-HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh---cc----HHHHHHHHH
Confidence 999997 56 689999999 6998887642 1345778889988888888886521 22 355666666
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----------c--hHHHHHHHHHcCeeeecCCcccC
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----------E--DKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
+.+.+.|+++.... .+..+... |.+.-+.+... . ...+...+.++||.+.+.
T Consensus 356 ~~l~~~L~~l~~~~----------~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----- 419 (460)
T PRK06105 356 ARLQARLRALADHP----------LVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM----- 419 (460)
T ss_pred HHHHHHHHHhhcCC----------CeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec-----
Confidence 66666666542110 12223333 33333333110 0 123444455789999762
Q ss_pred CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+ +.+|++..- ++++++++++++.+.+++
T Consensus 420 g-~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 420 G-DTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred C-CEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 2 589999643 999999999999988753
No 304
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.05 E-value=8.1e-09 Score=91.89 Aligned_cols=182 Identities=13% Similarity=0.037 Sum_probs=107.7
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
++|+++|+++|.||++ |+.....+. +..+..=-+-+++|.+| .|+.+|.+++. +++ +.+.......+++.+++.
T Consensus 259 ~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglg-gG~PlsAv~~~-~~~-~~~~~~~~~~T~~gnpla 335 (464)
T PRK06938 259 RITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIG-GSLPLAVVVYR-EWL-DTWQPGAHAGTFRGNQMA 335 (464)
T ss_pred HHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeecccc-CCCceEEEeeh-hHh-hccCCCCCCCCCCcCHHH
Confidence 8999999999999998 532111111 11111112566799997 78999999988 565 555433345678889999
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----- 205 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 205 (259)
.+++.+.|+...+ ++ ..++.++.-+++.+.|+++.. ..+ .+..+... |...-+.+...
T Consensus 336 ~Aaa~a~L~~l~~---~~----l~~~~~~~G~~l~~~L~~l~~----~~~-----~i~~VrG~-Glm~gie~~~~~~~~~ 398 (464)
T PRK06938 336 MAAGSATLRYIKE---HR----LAEHAAAMGERLREHLRQLQR----DYP-----QLGDVRGR-GLMLGVEIVDPQGEPD 398 (464)
T ss_pred HHHHHHHHHHHHH---hH----HHHHHHHHHHHHHHHHHHHHH----hCC-----Ceeeeecc-ceEEEEEeccCccccc
Confidence 8988888875421 12 234444445555555554321 000 02222322 23333333110
Q ss_pred -------c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 206 -------E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 -------~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
+ .+.+...+.++|+.+.++.. ..+.+|+.. ..++++++++++++.+.+.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~---~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 399 ALGHPPANGELASLIQRECLRRGLILELGGR---HGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred ccccCCccHHHHHHHHHHHHHCCeEEeecCC---CCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 1 12333444578999876421 136889975 34999999999999988753
No 305
>PRK06917 hypothetical protein; Provisional
Probab=99.04 E-value=2.5e-08 Score=88.46 Aligned_cols=182 Identities=15% Similarity=0.088 Sum_probs=113.1
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCeEEEeccccccCCCcc-eEEEEEecCHHHHHHHHHh----hhh
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEELMIFTISKLTGHAGS-RFGWAVIKDEAVYQRMSAY----ISL 121 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~~----~~~ 121 (259)
++|+++|+++|.||++ |+.....+. + .+| +-+++|.++ .|. .+|.+++. +++.+.+... ...
T Consensus 228 ~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PD----i~~~gK~l~-~G~~Pi~a~~~~-~~i~~~~~~~~~~~~~~ 301 (447)
T PRK06917 228 EICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPD----IMTLGKGLG-AGYTPIAATVVS-DRVMEPILRGSRSIMSG 301 (447)
T ss_pred HHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCC----EEEeeehhc-cCCcceEEEEEc-HHHHHHHhccCcccccc
Confidence 8999999999999998 422111111 1 222 468899997 785 89999999 7998887642 223
Q ss_pred hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 122 NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 122 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
.+++.+++..+++.+.++.+.+ ++ ..+++++.-+++.+.|+++.. ..+ .+..+...| ....+.
T Consensus 302 ~T~~gnpl~~aaa~a~l~~l~~---~~----l~~~~~~~g~~l~~~L~~l~~----~~~-----~i~~vrG~G-l~~~ie 364 (447)
T PRK06917 302 HTLSANPLSAATALAVLEYMEK---HN----LPEKAAEKGEYLIKGLQKVQQ----QST-----IIGDVRGKG-LLIGVE 364 (447)
T ss_pred cCCCCCHHHHHHHHHHHHHHHH---CC----HHHHHHHHHHHHHHHHHHHHh----cCC-----CEEEEeecc-eEEEEE
Confidence 4678889998888888885421 22 345566666666666665431 000 022233333 333333
Q ss_pred cCC-------C--c---hHHHHHHHHHcCeeeecCCc-c-cCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 202 CER-------E--E---DKDCYGILKAAKIIGREGKK-F-RAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 202 ~~~-------~--~---~~~~~~ll~~~gi~~~~g~~-f-~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+.. . + ...+...+.++||.+.+... . +...+.+|++.. .++++++++++++.+.+++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 365 FVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred EeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 310 0 0 23344445578999987421 1 112478999865 5999999999999988753
No 306
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.03 E-value=2e-08 Score=89.52 Aligned_cols=206 Identities=12% Similarity=0.083 Sum_probs=119.3
Q ss_pred hhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEe
Q 024997 26 NLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIF 88 (259)
Q Consensus 26 ~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~ 88 (259)
+.+++.+. ++..+ +|..| +.-.|.+. .++|+++|+++|.||++ |+.....+. +..+-.--+-
T Consensus 224 ~~l~~~~~~~~~~iAA-vI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv 302 (472)
T PRK08742 224 DALQALFEQSPGEICA-LILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLL 302 (472)
T ss_pred HHHHHHHHhCCCceEE-EEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEE
Confidence 44555552 35566 55555 44445443 28999999999999998 532111111 1111111255
Q ss_pred ccccccCCCc-ceEEEEEecCHHHHHHHHH------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 89 TISKLTGHAG-SRFGWAVIKDEAVYQRMSA------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 89 S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+++|.++ .| +.+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+...+ ++.++ ..+++-++.
T Consensus 303 ~~gKgl~-gG~~Plaav~~~-~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~---~~l~~-~~~~~g~~l 376 (472)
T PRK08742 303 CLSKGLT-GGFLPLSAVLAT-QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD---DDVIA-RNQPTAARM 376 (472)
T ss_pred EEccccc-CCCCCcceeecc-HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH---CCHHH-HHHHHHHHH
Confidence 6799997 68 489999999 699887753 12345678899988888888886522 22222 222222222
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C--------c---hHHHHHHHHHcCeeeecCCcccC
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E--------E---DKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~---~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
..+.+.+++++. +..+... |+..-+.+.. . + ...+.+.+.++||.+++.
T Consensus 377 ~~~~~~~~~~~~-------------i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----- 437 (472)
T PRK08742 377 TQLAAQIGEHPH-------------VADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----- 437 (472)
T ss_pred HHHHHHHhcCCC-------------eeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec-----
Confidence 222222332221 2223333 3333333321 0 0 122334445789999762
Q ss_pred CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+ +.+||...- +++++++++++|.+.+++
T Consensus 438 g-~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 438 G-DVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 689998743 999999999999998864
No 307
>PRK07480 putative aminotransferase; Validated
Probab=99.03 E-value=2e-08 Score=89.20 Aligned_cols=198 Identities=12% Similarity=0.057 Sum_probs=116.8
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcc-e
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGS-R 100 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~-R 100 (259)
++..+|++...+.-.|.+. .++|+++|+++|.||++ |+.....+. ...+..--+-+++|.++ .|. .
T Consensus 218 ~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-gG~~P 296 (456)
T PRK07480 218 DNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLT-SGYIP 296 (456)
T ss_pred CcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhc-cCCcc
Confidence 3566644444343334433 28999999999999998 532221111 11111111568899997 674 8
Q ss_pred EEEEEecCHHHHHHHHH----hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH-HHHHHHHHHHHHhcCCCc
Q 024997 101 FGWAVIKDEAVYQRMSA----YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTM-KKRWENLSKIISLSNRFS 175 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 175 (259)
+|.+++. +++.+.+.. .....+++.+++..+++.+.|+...+ ++. .++. ++.-+++.+.|+.+....
T Consensus 297 i~av~~~-~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l----~~~~~~~~g~~l~~~l~~l~~~~ 368 (456)
T PRK07480 297 MGAVGVG-DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD---EGI----VERVRDDTGPYLQKRLRELADHP 368 (456)
T ss_pred ceEEEEc-HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh---CCH----HHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999 699887732 23446788999999999999886522 222 3334 244444445554422100
Q ss_pred cccccccccccceeeCCCCCeeEEEecCCC--------c----hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--C
Q 024997 176 LQEIAPQYCTYFKKIRPPSPAYAWVKCERE--------E----DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--S 241 (259)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~ 241 (259)
.+..+...| ...-+.+... + ...+...+.++||.+.+ . .+.+|++... +
T Consensus 369 ----------~i~~vrG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~-----~-~~~l~~~Ppl~it 431 (456)
T PRK07480 369 ----------LVGEVRGVG-LVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRA-----V-GDRMIISPPLVIT 431 (456)
T ss_pred ----------CeeeEEeec-ceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEee-----c-CCEEEEECCCCCC
Confidence 022223333 3333333110 0 12344445578999865 1 2578999765 9
Q ss_pred hhhHHHHHHHHHHHhh
Q 024997 242 QDDFDLLLHRLDELIS 257 (259)
Q Consensus 242 ~~~~~~~~~~l~~~l~ 257 (259)
++++++++++|.+.+.
T Consensus 432 ~~eid~~~~~l~~al~ 447 (456)
T PRK07480 432 HAEIDELVEKARKALD 447 (456)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988875
No 308
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.00 E-value=2e-08 Score=89.03 Aligned_cols=175 Identities=13% Similarity=0.077 Sum_probs=99.2
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHH-----hhhhh
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA-----YISLN 122 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~-----~~~~~ 122 (259)
++|+++|+++|.||++ |+.....+. +.. .+ +-+++|.++ .| |.+. . +++.+.+.. .....
T Consensus 253 ~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~-PD--iv~~gK~l~-~~---a~l~-~-~~i~~~~~~~~~~~~~~~~ 323 (443)
T PRK08297 253 ELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVR-PD--IVAFGKKTQ-VC---GIMA-G-RRVDEVEDNVFAVSSRINS 323 (443)
T ss_pred HHHHHcCCEEEEechhhccCccchHHHHHhcCCC-CC--EEEeccccc-cc---ceec-c-hHHHHhhhhhccCccccCC
Confidence 8999999999999999 532211110 111 12 336899985 22 4444 4 243322211 12446
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC 202 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (259)
+++.+++...++.+.++... .++. .++.++.-+.+.+.|+++.. ..+. ....+... |..+.+.+
T Consensus 324 T~~gnpl~~aaa~a~L~~l~---~~~l----~~~~~~~g~~l~~~L~~l~~----~~~~----~~~~vrg~-G~~~~i~~ 387 (443)
T PRK08297 324 TWGGNLVDMVRARRILEVIE---EDGL----VENAARQGEYLLARLEELAA----EFPA----VVSNVRGR-GLMCAFDL 387 (443)
T ss_pred CCCccHHHHHHHHHHHHHHH---hcCH----HHHHHHHHHHHHHHHHHHHH----HCCC----cceeeecc-ceEEEEEe
Confidence 77889998888888887542 2233 34444444555555544320 0000 01122333 45555666
Q ss_pred CCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 203 EREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 203 ~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
.... ...+...+.++||.+.|+ +.+.+|++. ..+++++++++++|.+++.+
T Consensus 388 ~~~~~~~~~~~~l~~~Gvl~~~~-----~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 388 PTTADRDEVIRRLWEEGVLVLPC-----GERSIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred cCHHHHHHHHHHHHHCCEEEecC-----CCCeEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 4321 223334444789999873 235688854 45999999999999998763
No 309
>PRK12403 putative aminotransferase; Provisional
Probab=98.99 E-value=6.1e-08 Score=86.34 Aligned_cols=177 Identities=11% Similarity=0.041 Sum_probs=105.4
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCcc-eEEEEEecCHHHHHHHHHh----hhhh
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAGS-RFGWAVIKDEAVYQRMSAY----ISLN 122 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~~----~~~~ 122 (259)
++|+++|+++|.||++ |+.....+. +..+ +|+ +++|.+| .|. .+|.+++. +++.+.+... ....
T Consensus 250 ~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~P-Div--~~gK~lg-gG~~Piga~v~~-~~i~~~~~~~~~~~~~~~ 324 (460)
T PRK12403 250 RICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEP-DTL--SIAKGLT-SGYVPMGGLVLS-KRIAEALVEQGGVFAHGL 324 (460)
T ss_pred HHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCC-CeE--EEccccc-ccccceEEEEEC-HHHHHHHhcCCCccccCC
Confidence 8999999999999998 532221111 2222 333 5899997 684 89999988 6998877531 2345
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH-HHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK-KRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
+++.+++.-+++.+.|+... .++. .++++ ++-+++.+.|+++.. .. ..+..+... |....+.
T Consensus 325 T~~gnPl~~Aaala~L~~i~---~~~l----~~~~~~~~g~~l~~~L~~l~~----~~-----~~i~~vrG~-Gl~~gie 387 (460)
T PRK12403 325 TYSGHPVAAAVAIANLKALR---DEGV----VTRVKDDTGPYLQRCLREVFG----DH-----PLVGEVQGA-GLVAALQ 387 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHH---hccH----HHHHHHHHHHHHHHHHHHHHh----cC-----CCEEeEeec-ceEEEEE
Confidence 67788988888888887642 1222 33343 444444444443210 00 002222333 3333343
Q ss_pred cCCC-------c-----hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 202 CERE-------E-----DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 202 ~~~~-------~-----~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+... . ...+...+.++|+.+.+. + +.+|++... ++++++++++.+.+.+++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~-~~~~l~Ppl~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 388 FAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-----L-GRMIMAPALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred EccCccccccccchhHHHHHHHHHHHhCCEEEEec-----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 3210 0 111223345689999751 1 458888755 999999999999988753
No 310
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.99 E-value=2.9e-08 Score=88.30 Aligned_cols=202 Identities=11% Similarity=0.027 Sum_probs=118.3
Q ss_pred hhcccCC--CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEe
Q 024997 27 LWGNASS--DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIF 88 (259)
Q Consensus 27 ~l~~~~~--~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~ 88 (259)
.|++.+. ++..+ +|..| .+. |.+. .++|+++|+++|.||++ |+.....+. +.. .+++
T Consensus 219 ~l~~~i~~~~~vAa-vIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~-PDiv-- 293 (459)
T PRK06082 219 YLEYVIEKEGGIGA-FIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIE-PDIL-- 293 (459)
T ss_pred HHHHHHhcCCCEEE-EEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCC-CCEE--
Confidence 4566553 34556 45555 433 3322 28999999999999998 432111111 111 1233
Q ss_pred ccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 89 S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
+++|.+| .| +.+|.+++. +++.+.+.......+.+.+++.-+++.+.|+...+ ++ ..++++++-+++.+.
T Consensus 294 ~~gKgl~-gG~~P~~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~----l~~~~~~~g~~l~~~ 364 (459)
T PRK06082 294 CIGKGLG-GGLVPIAAMITK-DKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EG----LLEKVKADSQFMRER 364 (459)
T ss_pred Eeccccc-CCCCcceEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cC----HHHHHHHHHHHHHHH
Confidence 4899998 67 589999998 57765442111125678889888888888875421 22 355566666666666
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCC------Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER------EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
|+++.. .. ..+..+... |...-+.+.. .+ ...+...+.++||.+.+. +.+.+|++.
T Consensus 365 L~~l~~----~~-----~~i~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----~~~~i~~~P 429 (459)
T PRK06082 365 LLEMKA----KY-----PLIGDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS-----QGNVIQLSP 429 (459)
T ss_pred HHHHHh----hC-----CCeeeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec-----CCCEEEEeC
Confidence 655321 00 002223333 3333444421 01 122333344789988762 237899996
Q ss_pred e--cChhhHHHHHHHHHHHhh
Q 024997 239 L--KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 239 ~--~~~~~~~~~~~~l~~~l~ 257 (259)
. .++++++++++++.+.+.
T Consensus 430 pl~it~~eid~~~~~l~~~l~ 450 (459)
T PRK06082 430 PLIITREELTQALAILEEAIA 450 (459)
T ss_pred CCccCHHHHHHHHHHHHHHHH
Confidence 4 499999999999998875
No 311
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=98.98 E-value=5e-09 Score=89.52 Aligned_cols=84 Identities=12% Similarity=0.079 Sum_probs=69.9
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEecccccc
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLT 94 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~ 94 (259)
...|.+.|++.++++|+++.|...+|-+|.+++ ++|+++|+.+++|.++ .+.....+ +..+-+++..|..|.|
T Consensus 167 ~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-~eln~D~~s~s~HK~y 245 (428)
T KOG1549|consen 167 GLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-QELNADFLSISAHKIY 245 (428)
T ss_pred ccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-HHcCchheeeeccccc
Confidence 357778899999999999999999999999995 7899999999999977 22211122 3456688999999999
Q ss_pred CCCcceEEEEEec
Q 024997 95 GHAGSRFGWAVIK 107 (259)
Q Consensus 95 g~~G~R~G~i~~~ 107 (259)
|.+| +|++++.
T Consensus 246 gp~~--iGaLYvr 256 (428)
T KOG1549|consen 246 GPPG--IGALYVR 256 (428)
T ss_pred CCCc--ceEEEEc
Confidence 9999 9999988
No 312
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.98 E-value=3.5e-08 Score=84.80 Aligned_cols=211 Identities=15% Similarity=0.147 Sum_probs=130.0
Q ss_pred cChhhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCCCCCCCeEE
Q 024997 23 GEANLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIPAPADEELM 86 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~~~~~~~i~ 86 (259)
.|++.+++++. ++..+ ||..| .| -|.+. .++|+++|+++|.||+. |.-+.....+..+-.--
T Consensus 185 ND~~al~~~~~~~g~~IAa-VIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD 262 (432)
T COG0001 185 NDLEALEEAFEEYGDDIAA-VIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD 262 (432)
T ss_pred CCHHHHHHHHHHcCCcEEE-EEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc
Confidence 46777888773 35666 66666 45 22222 38999999999999988 42111111111111222
Q ss_pred EeccccccCCCcceEEEEEecCHHHHHHHHHhh---hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI---SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
+.++.|+.| -|+.+|.+.+. +++.+.+.... ...+.+.+++...++.+.++...+. +. .++++.+..++
T Consensus 263 lttlGKiIG-GGlP~ga~gGr-~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~----~y~~l~~~~~~ 334 (432)
T COG0001 263 LTTLGKIIG-GGLPIGAFGGR-AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EG----VYERLDALGER 334 (432)
T ss_pred hhhhhhhhc-CCcceeeeccH-HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--cc----HHHHHHHHHHH
Confidence 889999998 99999999999 79999876543 3467888999999998888864221 11 35566666666
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC----CC------c----hHHHHHHHHHcCeeeecCCcccC
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE----RE------E----DKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------~----~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
|.+.|+++.. ..+.+ +.. ...++++-+.=.+ +. + ..++..+| ++||.+.|.. |
T Consensus 335 L~~gl~~~~~-------~~g~~-~~v-~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~-~-- 401 (432)
T COG0001 335 LAEGLRAAAE-------RHGIP-LTV-NRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQ-F-- 401 (432)
T ss_pred HHHHHHHHHH-------HhCCC-eEE-eeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCcc-c--
Confidence 6666665321 11111 111 2223332222111 11 1 24455455 6899998832 1
Q ss_pred CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...=+|.++++++++..++.+.+++++
T Consensus 402 --ea~flS~ahte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 402 --EAGFLSTAHTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred --cceeeecccCHHHHHHHHHHHHHHHHH
Confidence 123577778999999999999887753
No 313
>PRK07483 hypothetical protein; Provisional
Probab=98.97 E-value=4.2e-08 Score=86.93 Aligned_cols=182 Identities=16% Similarity=0.116 Sum_probs=110.2
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCeEEEeccccccCCCcc-eEEEEEecCHHHHHHHHHh----hhh
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEELMIFTISKLTGHAGS-RFGWAVIKDEAVYQRMSAY----ISL 121 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~~~~~~----~~~ 121 (259)
++|+++|+++|.||++ |+.....+. + .+| +-+++|.++ .|+ .+|.+++. +++.+.+... ...
T Consensus 228 ~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD----iv~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~h~ 301 (443)
T PRK07483 228 EVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD----LVTIAKGLG-AGYQPIGAVLAS-DRIYDAIADGSGFFQHG 301 (443)
T ss_pred HHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC----eeeehhhhc-cCccccEEEEEc-HHHHHHHhcCCCccccC
Confidence 8999999999999998 532111110 1 223 566799997 785 89999999 6998877532 234
Q ss_pred hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 122 NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 122 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
.+++.+++.-+++.+.++.+.+ ++. .+..++.-+++.+.|+++.. ..+ .+..+...| ...-+.
T Consensus 302 ~T~~gnpl~~aaa~a~l~~i~~---~~l----~~~~~~~g~~l~~~L~~l~~----~~~-----~i~~vRG~G-lm~gie 364 (443)
T PRK07483 302 HTYLGHATACAAALAVQRVIAE---DGL----LANVRARGEQLRARLRERLG----QHP-----HVGDIRGRG-LFVGVE 364 (443)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh---cCH----HHHHHHHHHHHHHHHHHHHh----cCC-----CeeeEeecc-cEEEEE
Confidence 5788899998888888876522 233 44444555555555543210 000 022223332 222232
Q ss_pred cCCC---------c---hHHHHHHHHHcCeeeecCCc-c-cCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 202 CERE---------E---DKDCYGILKAAKIIGREGKK-F-RAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 202 ~~~~---------~---~~~~~~ll~~~gi~~~~g~~-f-~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+... + .+.+...+.++|+.+.+... . +...+.+||... .+++++++++++|.+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 365 LVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred EeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2110 1 12344445578999987321 1 111368999863 3999999999999988763
No 314
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.97 E-value=9.3e-08 Score=82.59 Aligned_cols=208 Identities=15% Similarity=0.090 Sum_probs=125.0
Q ss_pred ccccChhhhcccCC-CCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CC-CCCCCCCCCCCeEEEec
Q 024997 20 KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WP-HFAPIPAPADEELMIFT 89 (259)
Q Consensus 20 ~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~-~~~~~~~~~~~~i~~~S 89 (259)
...+|.+++++.+. .++++|++..=+.|-=.-+ .++|.+.|++++.|-++. +. ...+++ .-.++.+|
T Consensus 153 ~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~---~ADvvt~s 229 (399)
T PF00464_consen 153 TGLIDYDELEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP---YADVVTGS 229 (399)
T ss_dssp TSSB-HHHHHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC---TSSEEEEE
T ss_pred CCeECHHHHHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccc---cceEEEee
Confidence 45788888998884 4899966555444443334 489999999999999983 22 222332 24799999
Q ss_pred cccccCCCcceEEEEEec-------------CHHHHHHHHHhhhhhcCCCCHHHHHHHH-HHHHHHHhcCCcchHHHHHH
Q 024997 90 ISKLTGHAGSRFGWAVIK-------------DEAVYQRMSAYISLNTMGVSRECQLRAF-KLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 90 ~SK~~g~~G~R~G~i~~~-------------~~~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~~~~~~~~~~~~~~~~ 155 (259)
+.|+| +|=|-|.|.+. ++++.+++.+..-+...+.+.....++. -.+.+. ....+.+..+
T Consensus 230 ThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea----~~~~fk~Ya~ 303 (399)
T PF00464_consen 230 THKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA----LSPEFKEYAK 303 (399)
T ss_dssp SSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH----TSHHHHHHHH
T ss_pred ccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc----cCHHHHHHHH
Confidence 99998 35556999888 4689999988776655555555444433 233321 2234567788
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCeeEEEecCCC--chHHHHHHHHHcCeeee----cCCccc
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKCERE--EDKDCYGILKAAKIIGR----EGKKFR 228 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~----~g~~f~ 228 (259)
++-+|.+.|.+.|.+.+ ++.... ...-.+|+++... +...+.+.|++.||.+. |+..-.
T Consensus 304 qVv~NAk~La~~L~~~G--------------~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~ 369 (399)
T PF00464_consen 304 QVVKNAKALAEALQERG--------------FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSP 369 (399)
T ss_dssp HHHHHHHHHHHHHHHTT---------------EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTT
T ss_pred HHHHHHHHHHHHHhhCC--------------cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCC
Confidence 89999999999999866 332221 1222567888653 56788899999999874 333111
Q ss_pred CCCCeEEEEeec------ChhhHHHHHH
Q 024997 229 AEARFVRLSLLK------SQDDFDLLLH 250 (259)
Q Consensus 229 ~~~~~~Ris~~~------~~~~~~~~~~ 250 (259)
..+..+||+... .++++++..+
T Consensus 370 ~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 370 FVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp TT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred CCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 124689999732 4555555443
No 315
>PLN02271 serine hydroxymethyltransferase
Probab=98.97 E-value=1.2e-07 Score=84.54 Aligned_cols=214 Identities=12% Similarity=0.007 Sum_probs=134.1
Q ss_pred ccChhhhcc-cCCCCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeeccccCC----CCCCCCCCCCCeEEEeccccc
Q 024997 22 EGEANLWGN-ASSDTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYFWP----HFAPIPAPADEELMIFTISKL 93 (259)
Q Consensus 22 ~~d~~~l~~-~~~~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~~~----~~~~~~~~~~~~i~~~S~SK~ 93 (259)
.+|.++|++ +...++++|++..-.||.-.-+ .++|+++|+++++|.++... ...+-+ .....++.+|.+|.
T Consensus 284 ~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP-~~~aDvvt~TTHKt 362 (586)
T PLN02271 284 YIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP-FDYCDIVTSTTHKS 362 (586)
T ss_pred ccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC-CcCCcEEEeCCccc
Confidence 478888998 4477999988877678844434 38999999999999998311 111111 22358999999999
Q ss_pred c-CCCcceEEEEEecCH-------------------HHHHHHHHhhhhhcCCCCHHHH-HHHHHHHHHHHhcCCcchHHH
Q 024997 94 T-GHAGSRFGWAVIKDE-------------------AVYQRMSAYISLNTMGVSRECQ-LRAFKLLKVVLEDGGNNIFEF 152 (259)
Q Consensus 94 ~-g~~G~R~G~i~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~ 152 (259)
+ |..| |.|...+. ++.+++....-+...+.+.... ++.+..+... ....+.+
T Consensus 363 LrGPrG---G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea----~~~efk~ 435 (586)
T PLN02271 363 LRGPRG---GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQV----ATPEYKA 435 (586)
T ss_pred CCCCCc---eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHH----hChHHHH
Confidence 8 4455 88887621 2444444433333333333222 2223333422 2223467
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCeeEEEecCCC--chHHHHHHHHHcCeee----ecCC
Q 024997 153 GYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKCERE--EDKDCYGILKAAKIIG----REGK 225 (259)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~----~~g~ 225 (259)
..+++.+|.+.|.+.|.+.+ ++.+.. ...=.+++++... +...+.+.|++.||.+ .|+.
T Consensus 436 Ya~QVv~NAkaLA~~L~~~G--------------~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d 501 (586)
T PLN02271 436 YMQQVKKNAQALASALLRRK--------------CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGD 501 (586)
T ss_pred HHHHHHHHHHHHHHHHHHCC--------------CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCC
Confidence 78889999999999998765 222221 1122567777654 5788999999999976 3433
Q ss_pred cccCCCCeEEEEe------ecChhhHHHHHHHHHHHhh
Q 024997 226 KFRAEARFVRLSL------LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 226 ~f~~~~~~~Ris~------~~~~~~~~~~~~~l~~~l~ 257 (259)
.-...++.+||+. +..+++++++.+-|.++++
T Consensus 502 ~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 502 NGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 1112357899997 2256777777777766654
No 316
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.97 E-value=4.8e-08 Score=86.92 Aligned_cols=182 Identities=16% Similarity=0.114 Sum_probs=107.6
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
++|+++|+++|.||++ |+.....+. ...+..--+-+++|.++ .|+.+|.++.. +++ +.+.......+++.+++.
T Consensus 253 ~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~-gG~Pi~av~~~-~~~-~~~~~~~~~~T~~gnpla 329 (459)
T PRK06931 253 EVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVG-GGLPLAVLGIK-KEF-DAWQPGGHTGTFRGNQLA 329 (459)
T ss_pred HHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEeccccc-CCcceeeeeeH-HHH-hhccCCCCCCCCCCCHHH
Confidence 8999999999999998 522111111 01111111667799998 78999998877 464 655444455678889999
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-----
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----- 205 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 205 (259)
.+++.+.|+.+.+ ++. .++.++.-+++.+.|+++.. ..+ .+..+... |.+.-+.+...
T Consensus 330 ~aaala~L~~l~~---~~l----~~~~~~~G~~l~~~L~~l~~----~~~-----~i~~vrG~-Glm~giel~~~~~~~~ 392 (459)
T PRK06931 330 MATGLTTLKILKE---ENL----AQNAAERGEWLKAQLAELQK----RYP-----CIGNVRGR-GLMIGIEIVDERQPAD 392 (459)
T ss_pred HHHHHHHHHHHHh---CCH----HHHHHHHHHHHHHHHHHHHH----hCC-----CeEeEecC-ceEEEEEEccCccccc
Confidence 8988888886522 223 34444444455555544320 000 02222333 23333333110
Q ss_pred -------c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 206 -------E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 -------~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+ ...+...+.++|+.+.+... ..+.+|+... .++++++++++++.+.+++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~---~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 393 AMGSYPADGELAAAIQKACFENGLLLERGGR---NGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred ccccCCccHHHHHHHHHHHHHCCcEEeecCC---CCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 1 12233444578999876321 2377898864 3999999999999988763
No 317
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.96 E-value=1.8e-07 Score=81.80 Aligned_cols=215 Identities=10% Similarity=0.054 Sum_probs=136.2
Q ss_pred ccccChhhhcccCCC----CceEEEEcCCCCCCh-hhH--------HHhhcCCCcEEEeecccc-CCCC------CCCCC
Q 024997 20 KFEGEANLWGNASSD----THLVEFVTAPNNPDG-QMN--------KAVLKGPYAKSIYDHAYF-WPHF------APIPA 79 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~----~~~~i~i~~p~NPtG-~~~--------~~la~~~~~~vi~De~y~-~~~~------~~~~~ 79 (259)
++.+|++.|++.+++ ++.++.+.+++|..| ... .++|+++|+.||+|.+.+ +... ....+
T Consensus 158 tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~ 237 (460)
T PRK13237 158 KGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQD 237 (460)
T ss_pred CCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCC
Confidence 467899999999853 345678888889885 332 389999999999998762 2110 11111
Q ss_pred ----------CCCCeEEEeccccccCCC-cceEEEEEecCHHHHHHHHHhhhhh----cC-CCCHHHHHHHHHHHHHHHh
Q 024997 80 ----------PADEELMIFTISKLTGHA-GSRFGWAVIKDEAVYQRMSAYISLN----TM-GVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 80 ----------~~~~~i~~~S~SK~~g~~-G~R~G~i~~~~~~~~~~~~~~~~~~----~~-~~~~~~q~~~~~~l~~~~~ 143 (259)
..--+..+.|++|.++.+ | |+++..|+++.++++...-.. +. +.+.-...+++..+.+.
T Consensus 238 ~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G---G~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~-- 312 (460)
T PRK13237 238 KSIKEIVHEMFSYADGCTMSGKKDCLVNIG---GFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEES-- 312 (460)
T ss_pred CcHhHHhhhccCcCcEEEEeCCCCCCCCCc---eEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhh--
Confidence 123477888999998755 5 999999899999988764221 22 22222333343344431
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----------chHHHHHH
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----------EDKDCYGI 213 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l 213 (259)
-.. ...+..-.+.+.|.+.|.+.+ +++..|.+|--++++.... ...++..+
T Consensus 313 -~~~----~y~~~ri~~~~~l~~~L~~~G--------------vpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~l 373 (460)
T PRK13237 313 -VQY----EYIEHRVGQVRYLGEKLLAAG--------------VPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAEL 373 (460)
T ss_pred -chH----HHHHHHHHHHHHHHHHHHHCC--------------CceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHH
Confidence 111 223334446667777777655 5556777776667765432 35677778
Q ss_pred HHHcCeeeec-CCcc-c----------CCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 214 LKAAKIIGRE-GKKF-R----------AEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 214 l~~~gi~~~~-g~~f-~----------~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
..+.||-..- |+.. + ++-..+|+++-+ +.+.++...+++..+.++
T Consensus 374 y~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 374 YIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred HHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 7788885432 2211 1 113579999954 889999999999887653
No 318
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.96 E-value=4.5e-08 Score=86.57 Aligned_cols=205 Identities=9% Similarity=0.067 Sum_probs=113.2
Q ss_pred ChhhhcccCC---CCceEEEEcCCC---CCChhhH---HHhhcCCCcEEEeeccc--cCCCCCCCCCCCCCeEEEecccc
Q 024997 24 EANLWGNASS---DTHLVEFVTAPN---NPDGQMN---KAVLKGPYAKSIYDHAY--FWPHFAPIPAPADEELMIFTISK 92 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~---NPtG~~~---~~la~~~~~~vi~De~y--~~~~~~~~~~~~~~~i~~~S~SK 92 (259)
|++.|++.+. ++..+ ++..|- .|+-..+ .++|+++|+++|+||++ |...........+-.--+.+++|
T Consensus 173 d~~~l~~~l~~~~~~~aa-vi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t~gK 251 (431)
T PRK06209 173 DIASLEALFEDHPGRIAC-VILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFGK 251 (431)
T ss_pred CHHHHHHHHHhCCCCEEE-EEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceeeehh
Confidence 6777887763 24455 555553 2332223 38999999999999998 31111001000011112588999
Q ss_pred ccCCCcceEEEEEecCHHHHHH--HHH------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 93 LTGHAGSRFGWAVIKDEAVYQR--MSA------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 93 ~~g~~G~R~G~i~~~~~~~~~~--~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
.+| .|+.+|+++++ +++.+. +.. .....+.+++++.-+++.+.++... .++. .++++++-+++
T Consensus 252 ~lg-gG~p~~av~~~-~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~---~~~~----~~~~~~~g~~l 322 (431)
T PRK06209 252 ALG-NGFAVSALAGK-REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR---DEDV----IERLHEQGAKL 322 (431)
T ss_pred hhc-CCcccEEEEEH-HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh---ccCH----HHHHHHHHHHH
Confidence 998 68889999999 698886 311 1123456677777777777777542 2233 44555555555
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEec--C---CCch---HHHHHHHHHcCeeeecCCcccCCCCeEEE
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC--E---REED---KDCYGILKAAKIIGREGKKFRAEARFVRL 236 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~ll~~~gi~~~~g~~f~~~~~~~Ri 236 (259)
.+.|+++.. .++ . .......+.+....-+ . ..+. ..+...+.++||.+.| ++|
T Consensus 323 ~~~L~~~~~----~~~---~--~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~----------l~i 383 (431)
T PRK06209 323 AAGVNEAAA----EHG---L--QDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS----------LVV 383 (431)
T ss_pred HHHHHHHHH----hCC---C--CeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc----------ccc
Confidence 555544210 000 0 1111112222111111 1 1111 1233334467997621 577
Q ss_pred EeecChhhHHHHHHHHHHHhh
Q 024997 237 SLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 237 s~~~~~~~~~~~~~~l~~~l~ 257 (259)
+..+++++++++++++.+.++
T Consensus 384 s~~ht~~dId~~l~~l~~~l~ 404 (431)
T PRK06209 384 SYAHGDADIERTIDAVHGALG 404 (431)
T ss_pred cccCCHHHHHHHHHHHHHHHH
Confidence 766699999999999998875
No 319
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.96 E-value=5e-08 Score=86.95 Aligned_cols=202 Identities=12% Similarity=0.087 Sum_probs=122.5
Q ss_pred hhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCe
Q 024997 26 NLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEE 84 (259)
Q Consensus 26 ~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~ 84 (259)
+.+++.+. ++..+ +|..| +.-.|.+. .++|+++|+++|.||++ |+.....+. + .+|
T Consensus 202 ~~le~~~~~~~~~iAA-vi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PD-- 278 (466)
T PRK07030 202 AHMEQTLAEHHDEIAA-VIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPD-- 278 (466)
T ss_pred HHHHHHHHhCCCceEE-EEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCC--
Confidence 34555552 35566 55555 33334433 38999999999999998 532111111 1 222
Q ss_pred EEEeccccccCCCc-ceEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Q 024997 85 LMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNT 156 (259)
Q Consensus 85 i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (259)
+-+++|.++ .| +.+|.+++. +++.+.+.. .....+++.+++..+++.+.|+...+ ++ ..++
T Consensus 279 --iv~~gKgl~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~---~~----l~~~ 347 (466)
T PRK07030 279 --FLCLSKALT-GGYLPLAAVLTT-DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ---DN----VIEN 347 (466)
T ss_pred --EEeeehhcc-CCcccceEEEec-HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh---cC----HHHH
Confidence 556699998 78 599999999 699888752 23445678899998888888886522 22 2445
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------c---hHHHHHHHHHcCeeeecC
Q 024997 157 MKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------E---DKDCYGILKAAKIIGREG 224 (259)
Q Consensus 157 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~ll~~~gi~~~~g 224 (259)
.++.-+++.+.|+++... + .+..+... |...-+.+... + ...+...+.++|+.+.+.
T Consensus 348 ~~~~G~~l~~~L~~l~~~-----~-----~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~ 416 (466)
T PRK07030 348 NRALARRMAEATAHLADH-----P-----HVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL 416 (466)
T ss_pred HHHHHHHHHHHHHHHhcC-----C-----CEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec
Confidence 555555555555544211 0 02222333 33334443210 0 123444455789999762
Q ss_pred CcccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 225 KKFRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 225 ~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+ +.+|+... .++++++++++++.+.+++
T Consensus 417 -----g-~~i~~~Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 417 -----G-SVVYFLPPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred -----C-CEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 2 57888743 4999999999999998864
No 320
>PRK02769 histidine decarboxylase; Provisional
Probab=98.96 E-value=1.2e-07 Score=82.38 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=125.7
Q ss_pred cccChhhhcccCCCC---ceEEEEcCCCCCChhhH-----HHhhcCCC---cEEEeeccccC---C---CCCCCCCCCCC
Q 024997 21 FEGEANLWGNASSDT---HLVEFVTAPNNPDGQMN-----KAVLKGPY---AKSIYDHAYFW---P---HFAPIPAPADE 83 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~---~~~i~i~~p~NPtG~~~-----~~la~~~~---~~vi~De~y~~---~---~~~~~~~~~~~ 83 (259)
..+|+++|++.+++. +.+|+++.++|+||.+. .++|+++| +++.+|.+|-+ + ....+....+.
T Consensus 143 g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~v 222 (380)
T PRK02769 143 GEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGI 222 (380)
T ss_pred CcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCC
Confidence 468899999988554 88999999999999998 38899998 79999999821 1 11122212256
Q ss_pred eEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhh------hhcCCC-CHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 024997 84 ELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYIS------LNTMGV-SRECQLRAFKLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 84 ~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~------~~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 155 (259)
+.+..|.+|.++ ..| +|+++.. ++..+.+..... ....|. +.....+.-..++.. ...-+.+..+
T Consensus 223 Dsis~s~HK~~~~P~g--~G~l~~r-~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~l----g~~G~~~~~~ 295 (380)
T PRK02769 223 DSIAISGHKFIGSPMP--CGIVLAK-KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL----GSKGLRQRVQ 295 (380)
T ss_pred CEEEECCcccCCCCCC--cEEEEEe-hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHH----CHHHHHHHHH
Confidence 788999999987 455 8999988 466665432111 000111 122223333334432 2234666778
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
+..+..+++.+.|+..+ +.....+....+.+..+ +.+ +. .|..+.+- ++.+|
T Consensus 296 ~~~~la~~l~~~L~~~g--------------~~~~~~p~~~~v~f~~~--~~~----~~--~~w~l~~~------~~~~h 347 (380)
T PRK02769 296 HCLDMAQYAVDRLQANG--------------IPAWRNPNSITVVFPCP--SER----IW--KKWHLATS------GNQAH 347 (380)
T ss_pred HHHHHHHHHHHHHHhCC--------------CEEEcCCCceEEEEcCC--CHH----HH--hCeeEccc------CCEEE
Confidence 88888888888887643 22223333344444333 222 12 35555431 25899
Q ss_pred EEeec--ChhhHHHHHHHHHHHhh
Q 024997 236 LSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 236 is~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+.+.. +.+.++..++-|.+.+.
T Consensus 348 i~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 348 IITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHh
Confidence 99976 77788888888876543
No 321
>PRK06148 hypothetical protein; Provisional
Probab=98.95 E-value=8.4e-08 Score=92.87 Aligned_cols=183 Identities=14% Similarity=0.102 Sum_probs=114.4
Q ss_pred HhhcCCCcEEEeeccc--cCCCCC-CCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-hhhcCCCCH
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFA-PIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-SLNTMGVSR 128 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~-~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-~~~~~~~~~ 128 (259)
++|+++|+++|.||++ |+.-.. -+. ...+..--+-+++|.+| .|+.+|.+++. +++.+.+..-. ...+++.++
T Consensus 812 ~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lg-gG~Plgav~~~-~ei~~~~~~g~~~~~Tf~gnp 889 (1013)
T PRK06148 812 AMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIG-NGHPMGAVVTT-REIADSFDNGMEYFNTFGGNP 889 (1013)
T ss_pred HHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeeccccc-CCcceEEEEEc-HHHHhhccCCCccccCCCCCH
Confidence 8999999999999998 532221 111 11111222678899998 79999999999 79998875421 346788899
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---- 204 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 204 (259)
+.-+++.+.|+... .++. .+..++.-+++.+.|+++.. ..+ .+..+... |.++-+.+..
T Consensus 890 la~aaa~a~L~~i~---~e~l----~~~~~~~G~~l~~~L~~l~~----~~~-----~i~~VrG~-Gl~~gvel~~~~~~ 952 (1013)
T PRK06148 890 VSCAIGLAVLDIIE---DEDL----QRNALEIGNYLLAGLRELQD----RFD-----IIGDVRGM-GLFLGIELVTDRKT 952 (1013)
T ss_pred HHHHHHHHHHHHHh---hccH----HHHHHHHHHHHHHHHHHHHH----hCC-----CceEEeee-ceEEEEEecCCccc
Confidence 99898888888652 2232 44455555555555554321 000 02222323 3333344321
Q ss_pred --Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 205 --EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 --~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
.+ ...+...+.++||.+.+. +...+.+||... .+++++++++++|.+++++
T Consensus 953 ~~~~~~~~~~i~~~~~~~Gvl~~~~---g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 953 KAPATAIARYVKNGARERGILIGTE---GPHDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred cCccHHHHHHHHHHHHhCCeEEecc---CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 11 223444455789999762 222478888874 4999999999999998864
No 322
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.95 E-value=5.5e-08 Score=86.61 Aligned_cols=202 Identities=12% Similarity=0.088 Sum_probs=122.8
Q ss_pred hhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCe
Q 024997 26 NLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEE 84 (259)
Q Consensus 26 ~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~ 84 (259)
+.+++.+. ++..+ ++..| +.-.|.+. .++|+++|+++|.||++ |+.....+. + .+|
T Consensus 211 ~~l~~~l~~~~~~iAA-vi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PD-- 287 (460)
T PRK06916 211 EELEELLKEKHEEIAA-IIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPD-- 287 (460)
T ss_pred HHHHHHHHhCCCcEEE-EEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCC--
Confidence 44555552 45666 44445 44445443 28999999999999998 422111111 1 222
Q ss_pred EEEeccccccCCCc-ceEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Q 024997 85 LMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNT 156 (259)
Q Consensus 85 i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (259)
+-+++|.++ .| +.+|.+++. +++.+.+.. .....+++.+++..+++.+.|+.+.+ ++ ..++
T Consensus 288 --iv~~gK~l~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~----l~~~ 356 (460)
T PRK06916 288 --IMTAGKGLT-GGYLPIAITVTT-DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK---TN----LIEQ 356 (460)
T ss_pred --eeeeehhhh-cCccccceeeec-HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh---cc----HHHH
Confidence 447899997 78 589999999 699887642 22344677789888888888875421 22 3455
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------c---hHHHHHHHHHcCeeeecC
Q 024997 157 MKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------E---DKDCYGILKAAKIIGREG 224 (259)
Q Consensus 157 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~ll~~~gi~~~~g 224 (259)
+++.-+++.+.|+++.... .+..+...|.+ .-+.+... + ...+...+.++||.+.+.
T Consensus 357 ~~~~g~~l~~~l~~l~~~~----------~v~~vrG~Glm-~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~ 425 (460)
T PRK06916 357 VARKTEYVATQLEDLFALK----------HVGDIRQLGLM-VGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL 425 (460)
T ss_pred HHHHHHHHHHHHHHhhcCC----------CeEEeecCCce-eeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec
Confidence 6666666666666543210 02223333332 22322110 0 123444455789999772
Q ss_pred CcccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 225 KKFRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 225 ~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+ +.+|+... .++++++++++++.+.+++
T Consensus 426 -----g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 426 -----G-NTIVFMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred -----C-CEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 2 57888743 4999999999999998763
No 323
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.94 E-value=2.3e-08 Score=86.26 Aligned_cols=193 Identities=15% Similarity=0.078 Sum_probs=119.4
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cC-CCCCCCC--C-CCCCeEEEe
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FW-PHFAPIP--A-PADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~-~~~~~~~--~-~~~~~i~~~ 88 (259)
|.+.+++.+.++++++++...+.-.|... .++|+++|+++|+||++ |. ....... + .+| +-
T Consensus 151 d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PD----iv 226 (364)
T PRK04013 151 DVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPD----IV 226 (364)
T ss_pred CHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCC----EE
Confidence 56778888877888866665453223222 38899999999999998 31 0111110 1 222 56
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
+++|.+| .|+.+|.++.. .++. ......+++.+++.-+++.+.|+...+ ++.+++..+. + ..+
T Consensus 227 ~~gK~lg-gG~P~~a~~~~-~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~---~~l~~~~~~~-------l-~~l 289 (364)
T PRK04013 227 TMGKGIG-NGVPVSLTLTN-FDVE----RGKHGSTFGGNPLACKAVAVTLRILRR---ERLVEKAGEK-------F-IEI 289 (364)
T ss_pred Eeccccc-CCceeEEEEec-cccc----CCCcCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHH-------H-HHh
Confidence 6799998 68999999988 3652 223456788999999999888886522 2332222221 1 111
Q ss_pred HhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHH
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFD 246 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~ 246 (259)
.. + .+..+... |.++-+.+... ...+...+.++|+.+.+ .+.+.+|+...- ++++++
T Consensus 290 ~~-~-------------~v~~vRG~-Gl~~gve~~~~-~~~i~~~~~~~Gll~~~-----~g~~vlr~~Ppl~it~~~i~ 348 (364)
T PRK04013 290 KG-E-------------RVVTTRGR-GLMIGIVLKKP-VGKYVEELQNRGYLVHT-----AGQRVIRLLPPLIISKDTME 348 (364)
T ss_pred cc-C-------------cceeeeeC-cEEEEEEeCCc-HHHHHHHHHhCCcEEee-----CCCCEEEEeCCcccCHHHHH
Confidence 11 1 02222333 45555555432 23344445568999876 234789999743 999999
Q ss_pred HHHHHHHHHhhh
Q 024997 247 LLLHRLDELISK 258 (259)
Q Consensus 247 ~~~~~l~~~l~~ 258 (259)
+++++|.+.+.+
T Consensus 349 ~~~~~l~~~l~~ 360 (364)
T PRK04013 349 EAKSAIEGVIND 360 (364)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 324
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.94 E-value=1.4e-07 Score=83.52 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=132.1
Q ss_pred hhhccCcccccc----cChhhhcccCCCCceEEEEcCCCCCC--hh--hH-----HHhhcCCCcEEEeeccc--cCC---
Q 024997 11 TDYFESVDYKFE----GEANLWGNASSDTHLVEFVTAPNNPD--GQ--MN-----KAVLKGPYAKSIYDHAY--FWP--- 72 (259)
Q Consensus 11 ~~~~g~~~~~~~----~d~~~l~~~~~~~~~~i~i~~p~NPt--G~--~~-----~~la~~~~~~vi~De~y--~~~--- 72 (259)
.+..|.+...++ .++++++++++++++++++.+++||+ |. +. .++|+++|+++++|.+. +.+
T Consensus 183 ~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~ 262 (454)
T TIGR00474 183 MEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSR 262 (454)
T ss_pred HHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchh
Confidence 344566553332 45678999999999999999999995 63 32 48999999999999863 111
Q ss_pred ---CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhc--
Q 024997 73 ---HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLED-- 144 (259)
Q Consensus 73 ---~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~-- 144 (259)
...+.. ...+.+++++|.+|.+|.+ ..|++++. ++++++++.....-...+......+....+...++.
T Consensus 263 ~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~-~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~ 339 (454)
T TIGR00474 263 YGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGK-KELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEK 339 (454)
T ss_pred ccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEEC-HHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchh
Confidence 011111 1345679999999998645 47999999 688877654322111122222222222222221111
Q ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHHhc--CCCccccccccccccceeeCCC--CCeeEEEecCCCchHHHHHHHH
Q 024997 145 -----GGNNIFEFGYNTMKKRWENLSKIISLS--NRFSLQEIAPQYCTYFKKIRPP--SPAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 145 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ll~ 215 (259)
..-+.+....++++++...+.+.|+.. +++.....+....-.-...+.. -.+-+.++....+.+.+.+.|+
T Consensus 340 a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr 419 (454)
T TIGR00474 340 ALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLR 419 (454)
T ss_pred hhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHh
Confidence 011234455667888899999999874 3222222111100000000111 1223333333345677777787
Q ss_pred HcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHH
Q 024997 216 AAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRL 252 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l 252 (259)
+....+.. ....+.+.+-+-. .+++++..++++
T Consensus 420 ~~~~~ii~----r~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 420 ELPPPIIG----RIEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred cCCCCEEE----EEECCEEEEEeCcCCHHHHHHHHHHh
Confidence 76644332 1235677777744 778888877765
No 325
>PRK07036 hypothetical protein; Provisional
Probab=98.93 E-value=1e-07 Score=85.02 Aligned_cols=194 Identities=14% Similarity=0.116 Sum_probs=119.4
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCC--CCCC---C-CCCCeEEEeccccccCC
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHF--APIP---A-PADEELMIFTISKLTGH 96 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~--~~~~---~-~~~~~i~~~S~SK~~g~ 96 (259)
++..++++.....-.|.+. .++|+++|+++|.||++ |+... .... + .+| +-+++|.++
T Consensus 219 ~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD----ivt~gK~l~- 293 (466)
T PRK07036 219 DNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD----IITFAKGLT- 293 (466)
T ss_pred CceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC----EEEEccccc-
Confidence 3566644444343334443 28999999999999998 53211 1111 1 222 567899997
Q ss_pred Cc-ceEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 97 AG-SRFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 97 ~G-~R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
.| +.+|.+++. +++.+.+.. +....+++.+++..+++.+.|+...+ ++ ..+..++.-+++.+.|
T Consensus 294 gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~---~~----l~~~~~~~g~~l~~~L 365 (466)
T PRK07036 294 SGYQPLGAVIIS-ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER---EG----LCEHVREVGPYFEERL 365 (466)
T ss_pred cCccccEEEEEc-HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh---CC----HHHHHHHHHHHHHHHH
Confidence 78 589999999 699888753 12334677899998888888886421 22 3455666666666666
Q ss_pred HhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------c---hHHHHHHHHHcCeeeecCCcccCCCCeEEE
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------E---DKDCYGILKAAKIIGREGKKFRAEARFVRL 236 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ri 236 (259)
+.+.... .+..+... |....+.+... + ...+...+.++||.+.+. + +.+|+
T Consensus 366 ~~l~~~~----------~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----~-~~~~l 428 (466)
T PRK07036 366 ASLRELP----------LVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL-----E-HLCVL 428 (466)
T ss_pred HHhccCC----------CEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec-----C-CEEEE
Confidence 5432110 12223333 33334444210 1 123444455789998762 2 56888
Q ss_pred Eee--cChhhHHHHHHHHHHHhh
Q 024997 237 SLL--KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 237 s~~--~~~~~~~~~~~~l~~~l~ 257 (259)
+.. .++++++++++++.+.++
T Consensus 429 ~Ppl~it~~~id~~~~~l~~al~ 451 (466)
T PRK07036 429 SPPLIITRAQIDEIVAILRAAIE 451 (466)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHH
Confidence 854 399999999999988775
No 326
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.93 E-value=4.2e-07 Score=77.87 Aligned_cols=223 Identities=13% Similarity=0.076 Sum_probs=131.4
Q ss_pred hhhhccCcc-------cccccChhhhcccCCCCceEEEEcCC-CCCChhhH--HHhhcCCCcEEEeeccc-cC-----CC
Q 024997 10 QTDYFESVD-------YKFEGEANLWGNASSDTHLVEFVTAP-NNPDGQMN--KAVLKGPYAKSIYDHAY-FW-----PH 73 (259)
Q Consensus 10 ~~~~~g~~~-------~~~~~d~~~l~~~~~~~~~~i~i~~p-~NPtG~~~--~~la~~~~~~vi~De~y-~~-----~~ 73 (259)
.....|+++ +.|.+|++.+++.+++++|+|+..+- .||. .+- .++|++||++||+|-++ ++ ..
T Consensus 90 ~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~ 168 (374)
T COG0399 90 AVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHLAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKK 168 (374)
T ss_pred HHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehhccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCcc
Confidence 334456665 34778899999999999999888875 4666 222 49999999999999987 32 12
Q ss_pred CCCCCCCCCCeEEEecc--ccccCCCcceEEEEEecCHHHHHHHHHhhhhhc----------------CCCCHHHHHHHH
Q 024997 74 FAPIPAPADEELMIFTI--SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT----------------MGVSRECQLRAF 135 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~q~~~~ 135 (259)
..++ . .+-+.|| +|.++ +| --|.++.+|+++.++++.++.... ...+.++.+++.
T Consensus 169 vGt~---G--d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl 241 (374)
T COG0399 169 VGSF---G--DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGL 241 (374)
T ss_pred cccc---c--ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHH
Confidence 2222 1 3444454 48886 44 459999999999998877654322 223445555555
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEE-EecCC--CchHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAW-VKCER--EEDKDCYG 212 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~ 212 (259)
.-|+. ++++.++=++..+...+.|++++++.+...+. .....++++ +.++. .+.+.+..
T Consensus 242 ~QL~~---------l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~---------~~~~~~~~~~i~~~~~~~~R~~l~~ 303 (374)
T COG0399 242 AQLER---------LDEINERRREIAQIYAEALKGLPGITLPPEPD---------GAVHAWHLYTILVDEEGISRDALME 303 (374)
T ss_pred HHHHH---------HHHHHHHHHHHHHHHHHHhhcCCCccccCCCC---------CceeeeeeeEEEecCCCCCHHHHHH
Confidence 55552 22233333444455555666555422221111 111223222 22332 24577888
Q ss_pred HHHHcCee----eecCCccc-------------C-----CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKII----GREGKKFR-------------A-----EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~----~~~g~~f~-------------~-----~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
.|++.||. .+|..... + ....++|=+-. +++++++.++.|++++++
T Consensus 304 ~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 304 SLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 88888554 44422110 0 12345555433 889999999999998864
No 327
>PRK06149 hypothetical protein; Provisional
Probab=98.93 E-value=9.4e-08 Score=92.38 Aligned_cols=180 Identities=13% Similarity=0.131 Sum_probs=111.7
Q ss_pred HhhcCCCcEEEeeccc--cCCCC---CCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-hhhcCC
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHF---APIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-SLNTMG 125 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~---~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-~~~~~~ 125 (259)
++|+++|+++|+||++ |+.-. ..+. +.. .+ +-+++|.+| .|+.+|.+++. +++.+.+.... ...+.+
T Consensus 772 ~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~-PD--ivt~gK~lg-~G~Pl~av~~~-~~i~~~~~~~~~~~sT~~ 846 (972)
T PRK06149 772 AAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVV-PD--IITMAKGMG-NGHPLGAVITR-REIAEALEAEGYFFSSTG 846 (972)
T ss_pred HHHHHcCCEEEEEeehhcCCccCccchhhhhcCCC-CC--EEEeccccc-CCeeeEEEEEc-HHHHhhhccCCcccCCCC
Confidence 8999999999999998 53221 1111 111 12 338899998 78999999999 69998876411 123467
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-
Q 024997 126 VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER- 204 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (259)
.+++.-+++.+.|+...+ ++ ..+..++.-+++.+.|+++.. ..+ .+..+... |.++-+.+..
T Consensus 847 gnP~~~aaala~L~~i~~---e~----l~~~~~~~G~~l~~~L~~l~~----~~~-----~i~~vrG~-Gl~~gvel~~~ 909 (972)
T PRK06149 847 GSPVSCRIGMAVLDVLRE---EK----LQENARRVGDHLKARLEALAD----RHP-----LIGAVHGM-GLYLGVELVRD 909 (972)
T ss_pred CCHHHHHHHHHHHHHHHh---cC----HHHHHHHHHHHHHHHHHHHHH----hCC-----CeEEEeec-ceEEEEEEecC
Confidence 889988988888886421 22 233444444555555554321 000 02223333 3344444321
Q ss_pred -----Cc---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 205 -----EE---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 -----~~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
.+ ...+...+.++||.+.+. +...+.+||... .++++++++++++.+++++
T Consensus 910 ~~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 910 RQTLEPATEETAAICDRLLELGVIMQPT---GDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred cccCCCChHHHHHHHHHHHhCCeEEeec---CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 11 223444455689999872 322478998864 4999999999999999864
No 328
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.92 E-value=1.4e-07 Score=82.24 Aligned_cols=213 Identities=12% Similarity=0.109 Sum_probs=134.3
Q ss_pred cccChhhhcccCCC----CceEEEEcCCCCCC-hhhH--------HHhhcCCCcEEEeecccc-CC---------CCC--
Q 024997 21 FEGEANLWGNASSD----THLVEFVTAPNNPD-GQMN--------KAVLKGPYAKSIYDHAYF-WP---------HFA-- 75 (259)
Q Consensus 21 ~~~d~~~l~~~~~~----~~~~i~i~~p~NPt-G~~~--------~~la~~~~~~vi~De~y~-~~---------~~~-- 75 (259)
+.+|++.|++.+++ .++++.+.+++|-. |..+ .++|+++|+.|++|.+.+ ++ .+.
T Consensus 152 GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~ 231 (450)
T TIGR02618 152 GNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDK 231 (450)
T ss_pred CCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCC
Confidence 46789999999854 34577888998865 6663 389999999999998762 11 111
Q ss_pred CCC----C-CCCCeEEEeccccccCCC-cceEEEEEecCHHHHHHHHHhhhhh----cCC-CCHHHHHHHHHHHHHHHhc
Q 024997 76 PIP----A-PADEELMIFTISKLTGHA-GSRFGWAVIKDEAVYQRMSAYISLN----TMG-VSRECQLRAFKLLKVVLED 144 (259)
Q Consensus 76 ~~~----~-~~~~~i~~~S~SK~~g~~-G~R~G~i~~~~~~~~~~~~~~~~~~----~~~-~~~~~q~~~~~~l~~~~~~ 144 (259)
++. . ...-+.++.|..|.++.+ | |+++..++++.+++++..... +.+ .+.-...+++..|++
T Consensus 232 ~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e---- 304 (450)
T TIGR02618 232 SIAEILKEMMSYADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE---- 304 (450)
T ss_pred CHHHHHHHHhccCcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHH----
Confidence 110 0 112355889999998766 6 788867789999988875332 111 122222333434443
Q ss_pred CCcchHHH-HHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----------chHHHHHH
Q 024997 145 GGNNIFEF-GYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----------EDKDCYGI 213 (259)
Q Consensus 145 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l 213 (259)
.+++ ....-..+.++|.+.|++.+ +.+..|.+|.-++++.... ...+...+
T Consensus 305 ----~~~~~y~~~r~~~a~~La~~L~~~G--------------vpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~l 366 (450)
T TIGR02618 305 ----AVDYEYIEHRVKQVRYLGDKLKAAG--------------VPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASI 366 (450)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHCC--------------CcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHH
Confidence 2221 22223335677777777664 4445677777777776542 35677777
Q ss_pred HHHcCeeeec-CCcc-c----------CCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 214 LKAAKIIGRE-GKKF-R----------AEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 214 l~~~gi~~~~-g~~f-~----------~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
..+.||-..- |+.. + ++-..+|+++-+ +.+.++...+++..+.++
T Consensus 367 y~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 367 YVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred HHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 7788885332 3221 1 113579999955 889999999999887653
No 329
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.92 E-value=1.7e-07 Score=82.61 Aligned_cols=218 Identities=16% Similarity=0.128 Sum_probs=132.4
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCC------CcEEEeeccc--c-----CCCC-CCCCCCC
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGP------YAKSIYDHAY--F-----WPHF-APIPAPA 81 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~------~~~vi~De~y--~-----~~~~-~~~~~~~ 81 (259)
+.+|+++|++.+++++.+|+++..||.||.+.+ ++|+++ |+++.+|.+| + .+.. ..+ ...
T Consensus 172 ~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~-~~~ 250 (431)
T TIGR01788 172 YVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF-RLP 250 (431)
T ss_pred eeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc-CCC
Confidence 568999999999888999999999999999983 889998 9999999999 1 1111 111 233
Q ss_pred CCeEEEecccccc-CCCcceEEEEEecCHH-HHHHHHH---hhhh----hcCCCCHHHHHHHHHHHHHHHhcCCcchHHH
Q 024997 82 DEELMIFTISKLT-GHAGSRFGWAVIKDEA-VYQRMSA---YISL----NTMGVSRECQLRAFKLLKVVLEDGGNNIFEF 152 (259)
Q Consensus 82 ~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~-~~~~~~~---~~~~----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 152 (259)
.-+-+..|.+|.+ +..| +|+++..+++ +.+.+.. +... .+...+...-.++..++. +. ..+..-+++
T Consensus 251 ~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~-l~-~lG~~G~~~ 326 (431)
T TIGR01788 251 RVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN-FL-RLGREGYRK 326 (431)
T ss_pred CceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHH-HH-HhcHHHHHH
Confidence 4466889999986 7777 8988887533 3333321 1110 011122221111111221 10 012234566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC--CCCCeeEEEecCC-----CchHHHHHHHHHcCeeeecCC
Q 024997 153 GYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR--PPSPAYAWVKCER-----EEDKDCYGILKAAKIIGREGK 225 (259)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~~~~g~ 225 (259)
..++..++.+++.+.|++.+++. ... +..+. +.+..+. .+...+.+.|.+.|+.+..-.
T Consensus 327 i~~~~~~la~~l~~~L~~~~~~e-------------l~~~~~~~~i-V~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 392 (431)
T TIGR01788 327 IMQNSLDVARYLAEEIAKLGPFE-------------IISDGSGIPL-VAFKLKDDADPGYTLYDLSHRLRERGWIVPAYT 392 (431)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEE-------------EeeCCCCceE-EEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCC
Confidence 77788888888888888876532 222 23333 3333332 234556667778898653311
Q ss_pred ccc-C-CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 226 KFR-A-EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 226 ~f~-~-~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.-. . +.-.+|+++.. +.+.++..++.|+.++.
T Consensus 393 ~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 393 LPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALA 428 (431)
T ss_pred CCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 111 1 33468999853 77788888888887764
No 330
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.90 E-value=7.4e-08 Score=78.15 Aligned_cols=204 Identities=17% Similarity=0.148 Sum_probs=131.5
Q ss_pred cccChhhhcccCC--------CCceEEEEcCCCCCCh-hhH--------HHhhcCCCcEEEeeccc-cC---CCCCCCC-
Q 024997 21 FEGEANLWGNASS--------DTHLVEFVTAPNNPDG-QMN--------KAVLKGPYAKSIYDHAY-FW---PHFAPIP- 78 (259)
Q Consensus 21 ~~~d~~~l~~~~~--------~~~~~i~i~~p~NPtG-~~~--------~~la~~~~~~vi~De~y-~~---~~~~~~~- 78 (259)
-.++++++++.+. +.+++|.+.|-||-+| .++ .+||+++|+.+-.|.+- |. ....++.
T Consensus 132 gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~ 211 (384)
T KOG1368|consen 132 GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK 211 (384)
T ss_pred CeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH
Confidence 3677888998873 3589999999998888 665 38999999999999987 31 1222322
Q ss_pred --CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCC--CHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 024997 79 --APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGV--SRECQLRAFKLLKVVLEDGGNNIFEFGY 154 (259)
Q Consensus 79 --~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 154 (259)
...|. +--.+||.+|.| +|-++..+++++++-+..+...+.+. +.+..++++-.|++ ... ..
T Consensus 212 i~~~fDS--VsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~-----~~~----~L 277 (384)
T KOG1368|consen 212 ICSAFDS--VSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE-----NVP----LL 277 (384)
T ss_pred HHHhhhh--hhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc-----chH----HH
Confidence 12222 233588999766 78666555899998877665544443 33333333333432 111 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCeeEEEec--CCCchHHHHHHHHHcCeeeecCCcccCCC
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKC--EREEDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
+.--++...+.+.++..++|++. .+ ....++.+.+ +..+.+.+.+.++++||.+..|..
T Consensus 278 ~~dHk~A~~lAe~~~~~~~i~v~-------------v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s----- 339 (384)
T KOG1368|consen 278 RADHKRAKELAEYINTPEEIRVE-------------VPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGAS----- 339 (384)
T ss_pred HHHHHHHHHHHHHhccccceeee-------------cchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccc-----
Confidence 44556677777888877665433 22 2223333333 334677788888899999988543
Q ss_pred CeEEEEeec--ChhhHHHHHHHH-HHHh
Q 024997 232 RFVRLSLLK--SQDDFDLLLHRL-DELI 256 (259)
Q Consensus 232 ~~~Ris~~~--~~~~~~~~~~~l-~~~l 256 (259)
..+|+.+-. ++++++..+..+ +.++
T Consensus 340 ~r~Rivlh~Qvt~~~ve~~~~~~~k~~~ 367 (384)
T KOG1368|consen 340 RRIRIVLHHQVTDEDVEYVKSVLSKKFL 367 (384)
T ss_pred cceEEEEEEecCHHHHHHHHHHHHHHHH
Confidence 347999855 899999999998 4444
No 331
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=98.87 E-value=7.8e-08 Score=83.26 Aligned_cols=202 Identities=15% Similarity=0.087 Sum_probs=116.1
Q ss_pred CcccchhhhhhccCcc-------cccccChhhhcccCCCCceEEEEcCCC-CCChhh-HHHhhcCCCcEEEeeccc-cCC
Q 024997 3 FYPLYQEQTDYFESVD-------YKFEGEANLWGNASSDTHLVEFVTAPN-NPDGQM-NKAVLKGPYAKSIYDHAY-FWP 72 (259)
Q Consensus 3 ~y~~~~~~~~~~g~~~-------~~~~~d~~~l~~~~~~~~~~i~i~~p~-NPtG~~-~~~la~~~~~~vi~De~y-~~~ 72 (259)
+|+.....+...|.++ ..+.+|++.+++.+++++++|++++.. +|.-.- +.++|+++|++||+|-++ ++.
T Consensus 74 t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~ 153 (363)
T PF01041_consen 74 TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGA 153 (363)
T ss_dssp S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-
T ss_pred cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecCCCCcccHHHHHHHHHHcCCcEEEccccccCc
Confidence 3455556666677765 347889999999999999998888863 666211 148899999999999987 321
Q ss_pred C--CCCCCCCCCCeEEEecc--ccccCC-CcceEEEEEecCHHHHHHHHHhhhhh-----------------cCCCCHHH
Q 024997 73 H--FAPIPAPADEELMIFTI--SKLTGH-AGSRFGWAVIKDEAVYQRMSAYISLN-----------------TMGVSREC 130 (259)
Q Consensus 73 ~--~~~~~~~~~~~i~~~S~--SK~~g~-~G~R~G~i~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 130 (259)
. ...+ +.. -.+.+.|| +|.+.. -| |+++++++++.+.++.+.... ....+.++
T Consensus 154 ~~~g~~~-G~~-gd~~~fSf~~~K~i~~geG---G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~ 228 (363)
T PF01041_consen 154 RYKGRPV-GSF-GDIAIFSFHPTKIITTGEG---GAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQ 228 (363)
T ss_dssp EETTEET-TSS-SSEEEEESSTTSSS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHH
T ss_pred eeCCEec-cCC-CCceEecCCCCCCCcCCCC---eeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHH
Confidence 1 1111 111 26667777 588842 34 999998888888887755322 23355555
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---ch
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---ED 207 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 207 (259)
.+.+..-|+ .+++..+.-+++...+.+.|++++++.....++... ....+...+.++.. +.
T Consensus 229 AAigl~QL~---------~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~-------~~~~~~f~i~~~~~~~~~r 292 (363)
T PF01041_consen 229 AAIGLAQLK---------RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAE-------RSSYYRFPIRLPDEALADR 292 (363)
T ss_dssp HHHHHHHHH---------THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTE-------EBCESSEEEEETCCGCSTH
T ss_pred HHHHHHHHH---------HhhhhHHHHHHHHHHHHHHHhcCCCccccccccccc-------ccccccccccccccccchH
Confidence 555555555 344456666677777777788776543222111000 00111223334432 45
Q ss_pred HHHHHHHHHcCeeeecCC
Q 024997 208 KDCYGILKAAKIIGREGK 225 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~ 225 (259)
+.+.+.|++.||.+.+..
T Consensus 293 d~l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 293 DELVEALRARGIETRPHY 310 (363)
T ss_dssp HHHHHHHHHTTBEEBCST
T ss_pred HHHHHHHHHCCCcccccc
Confidence 777778888999988754
No 332
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=98.85 E-value=7.7e-09 Score=79.03 Aligned_cols=103 Identities=9% Similarity=0.007 Sum_probs=70.5
Q ss_pred CCcccch-hhhhhccCcccccccC--------hhhhcccC-CCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 2 PFYPLYQ-EQTDYFESVDYKFEGE--------ANLWGNAS-SDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 2 P~y~~~~-~~~~~~g~~~~~~~~d--------~~~l~~~~-~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
|+|+... ..+...|.+...+..+ .+.+++.. .++++++++++|+||+|... .++|+++|+++|+|
T Consensus 49 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D 128 (170)
T cd01494 49 NGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVD 128 (170)
T ss_pred cccceehhhHHHhcCCEEEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEe
Confidence 5676666 6666667665322111 11344433 56889999999999999876 38899999999999
Q ss_pred ccccCCCCC--CC-CCCCCCeEEEeccccccCCCcceEEEEEe
Q 024997 67 HAYFWPHFA--PI-PAPADEELMIFTISKLTGHAGSRFGWAVI 106 (259)
Q Consensus 67 e~y~~~~~~--~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~ 106 (259)
++|...... .. ....+.++++.|++|.++. .++|++++
T Consensus 129 ~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 129 AASAGGASPAPGVLIPEGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred cccccccccccccccccccCCEEEEEcccccCC--CceEEEEe
Confidence 999421111 11 1234568899999999985 66999875
No 333
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.84 E-value=3e-07 Score=87.79 Aligned_cols=215 Identities=9% Similarity=0.026 Sum_probs=132.7
Q ss_pred ccChhhhcccCC---CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCC-CCCCCCCCCCeEEEecccc
Q 024997 22 EGEANLWGNASS---DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPH-FAPIPAPADEELMIFTISK 92 (259)
Q Consensus 22 ~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~-~~~~~~~~~~~i~~~S~SK 92 (259)
.+|+++|++.++ +++++|++++|||-+|... .++|+++|+.+++|.++.-.. ....++..+-+++.+|..|
T Consensus 650 ~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK 729 (993)
T PLN02414 650 NINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHK 729 (993)
T ss_pred CcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCc
Confidence 578899999996 4789999999999999987 388999999999999883212 1122245667999999999
Q ss_pred ccCC----CcceEEEEEecCHHHHHHHHHhh-----------hhhcCCC---CHHHHH----HHHHHHHHHHhcCCcchH
Q 024997 93 LTGH----AGSRFGWAVIKDEAVYQRMSAYI-----------SLNTMGV---SRECQL----RAFKLLKVVLEDGGNNIF 150 (259)
Q Consensus 93 ~~g~----~G~R~G~i~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~q~----~~~~~l~~~~~~~~~~~~ 150 (259)
.|+. -|=-+|++++. +++...+-... .....|. ++..|. ++..++... +.+-+
T Consensus 730 ~f~~P~G~GGPg~G~l~~~-~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l----G~~Gl 804 (993)
T PLN02414 730 TFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM----GSEGL 804 (993)
T ss_pred cCCcCcccCCCCeeeEEEc-hhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH----CHhHH
Confidence 6641 22338999988 67766553211 0011122 122222 233334432 33345
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC-ee-EEEecC---C---Cc-hHHHHHHHHHcCeee
Q 024997 151 EFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP-AY-AWVKCE---R---EE-DKDCYGILKAAKIIG 221 (259)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~---~---~~-~~~~~~ll~~~gi~~ 221 (259)
.+..+....+..++.+.|++... +. ...+.+. ++ ..+++. + .+ .+..++|+ ++||..
T Consensus 805 ~~~a~~a~~nAnYl~~rL~~~~~--~~-----------~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Giha 870 (993)
T PLN02414 805 TDASKIAILNANYMAKRLEGHYP--VL-----------FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHA 870 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCC--cc-----------ccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEE
Confidence 55566677777888888876322 11 1111111 11 112222 1 12 45555555 789975
Q ss_pred ecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 222 REGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
-- ..|. ..+.+|++..- ++++++..++.+..+..
T Consensus 871 pt-~~~p-v~~~lmiepTE~~skeelDrf~~al~~i~~ 906 (993)
T PLN02414 871 PT-MSWP-VPGTLMIEPTESESKAELDRFCDALISIRE 906 (993)
T ss_pred ee-eccc-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHH
Confidence 43 3353 46899999864 88999999999877654
No 334
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.2e-06 Score=73.92 Aligned_cols=214 Identities=13% Similarity=0.058 Sum_probs=138.3
Q ss_pred cccChhhhcccC-CCCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CC-CCCCCCCCCCCeEEEecc
Q 024997 21 FEGEANLWGNAS-SDTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WP-HFAPIPAPADEELMIFTI 90 (259)
Q Consensus 21 ~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~-~~~~~~~~~~~~i~~~S~ 90 (259)
..+|.|++++.+ ..++|+|+.-.--.|-=.-+ .++|.+-|+++++|-+++ +. ...++ +...++.+|.
T Consensus 151 ~~IDyD~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~---~~AdvVTtTT 227 (413)
T COG0112 151 GLIDYDEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL---PHADVVTTTT 227 (413)
T ss_pred CccCHHHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC---CccceEeCCc
Confidence 357778888877 45899955544334443344 389999999999999994 11 11222 2358999999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHH-HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRA-FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
+|+| .|=|-|.|.+.++++.+++....-+...+.+..--.++ +-++.+. .+.-+.+..+++-+|.+.|.+.|.
T Consensus 228 HKTl--rGPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Ea----l~p~fk~Ya~qVv~NAkaLAe~l~ 301 (413)
T COG0112 228 HKTL--RGPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEA----LEPEFKEYAKQVVKNAKALAEALK 301 (413)
T ss_pred ccCC--CCCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHH----cChhHHHHHHHHHHHHHHHHHHHH
Confidence 9998 45566999988668988888765554444333221111 1122322 233456677888999999999999
Q ss_pred hcCCCccccccccccccceeeCCCCCe-eEEEecCC--CchHHHHHHHHHcCeeeec-CCcccC----CCCeEEEEe---
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPA-YAWVKCER--EEDKDCYGILKAAKIIGRE-GKKFRA----EARFVRLSL--- 238 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ll~~~gi~~~~-g~~f~~----~~~~~Ris~--- 238 (259)
+.+ ++.+..-.-. -+.+|+.. .+...+..+|++.||.+.- +-.|.+ .+..+||..
T Consensus 302 ~~G--------------~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~ 367 (413)
T COG0112 302 ERG--------------FKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAV 367 (413)
T ss_pred HcC--------------CeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHH
Confidence 865 3333311112 34567763 3688999999999998643 222332 256789996
Q ss_pred ---ecChhhHHHHHHHHHHHhh
Q 024997 239 ---LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 239 ---~~~~~~~~~~~~~l~~~l~ 257 (259)
+..++++++..+-|.+++.
T Consensus 368 TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 368 TTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred hhcCCCHHHHHHHHHHHHHHHh
Confidence 2266788888888777764
No 335
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.83 E-value=5.2e-08 Score=86.43 Aligned_cols=205 Identities=11% Similarity=0.079 Sum_probs=111.0
Q ss_pred hhhcccCC---CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCe--EEEe
Q 024997 26 NLWGNASS---DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEE--LMIF 88 (259)
Q Consensus 26 ~~l~~~~~---~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~--i~~~ 88 (259)
+.|++.+. ++..++++.....-.|.+. .++|+++|+++|+||++ |+.....+. +..+.. --+-
T Consensus 239 ~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~ 318 (464)
T TIGR00699 239 EEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMV 318 (464)
T ss_pred HHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEE
Confidence 44555552 3566745444344444444 28999999999999998 432111111 000100 1257
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
+++|.+|..| +++.. +............+++.+++.-+++.+.|+...+ ++. .+..++.-+++.+.|
T Consensus 319 t~gK~lg~gG----~~~~~--~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~---~~l----~~~~~~~g~~l~~~L 385 (464)
T TIGR00699 319 TFSKKFQTAG----YFFHD--PAFRPNKPYRQFNTWMGDPSRALILREIIQEIKR---KDL----LENVAHVGDYLYTGL 385 (464)
T ss_pred EehhhhccCC----ccccc--hhccCCCCcccccCCCCCHHHHHHHHHHHHHHHh---cCH----HHHHHHHHHHHHHHH
Confidence 8899996334 44433 2222111223445677888888888878875421 222 334444444555555
Q ss_pred HhcCCCccccccccccccceeeC-CCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--Chhh
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDD 244 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~ 244 (259)
+++.. .++. .+..+. ...|..+-+.++... ...+.+.+.++|+.+.+. +.+.+||+..- ++++
T Consensus 386 ~~l~~----~~~~----~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~-----g~~~ir~~Ppl~it~~e 452 (464)
T TIGR00699 386 EDLQK----KYPE----FIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGC-----GVKAIRLRPMLVFQKHH 452 (464)
T ss_pred HHHHH----hCCC----ceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecC-----CCCeEEEeCCCCCCHHH
Confidence 44320 0000 022222 022444445554321 233444455689998762 34789999743 9999
Q ss_pred HHHHHHHHHHHh
Q 024997 245 FDLLLHRLDELI 256 (259)
Q Consensus 245 ~~~~~~~l~~~l 256 (259)
+++++++|.+.+
T Consensus 453 id~~~~~l~~~~ 464 (464)
T TIGR00699 453 ADIFLEIISKII 464 (464)
T ss_pred HHHHHHHHHHhC
Confidence 999999998764
No 336
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.81 E-value=2.1e-07 Score=78.14 Aligned_cols=176 Identities=15% Similarity=0.107 Sum_probs=111.5
Q ss_pred HhhcCCCcEEEeeccc--cCC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-hhhcCCCCH
Q 024997 54 AVLKGPYAKSIYDHAY--FWP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-SLNTMGVSR 128 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-~~~~~~~~~ 128 (259)
++|+++|.++|.||++ |+. ++..+ +..+.+=-+-|++|.+| .|..+|.++.. +++.+-+.+.. ...+.+.+|
T Consensus 240 ~~v~k~Ggl~IaDEVqtGfGRtG~~wgf-e~h~v~PDIvTmAKgiG-nG~Pl~AVvtt-~EIa~v~~~~~~~fnTyggnP 316 (442)
T KOG1404|consen 240 KVVRKRGGLFIADEVQTGFGRTGHMWGF-ESHGVVPDIVTMAKGIG-NGFPLGAVVTT-PEIADVLNQKSSHFNTYGGNP 316 (442)
T ss_pred HHHHHcCCEEEehhhhhccccccccccc-cccCCCccHHHHHhhcc-CCCcceeeecC-HHHHHHHHhccccccccCCCc
Confidence 8999999999999999 632 34444 33344445889999998 89999999999 69999998877 677889999
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe---cC-C
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK---CE-R 204 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~ 204 (259)
+.-+++.++++... ++.+++. -++--.++.+.|..+.+ . ...+..++..|-+ +=+. -+ +
T Consensus 317 ~a~avg~aVL~Vik----ee~LqE~---aa~vG~yl~~~l~~l~d----~-----h~iIGdVRG~GLm-~GvE~V~dk~~ 379 (442)
T KOG1404|consen 317 VACAVGLAVLKVIK----EENLQEN---AAEVGSYLLEKLAALKD----K-----HPIIGDVRGRGLM-LGVELVSDKSE 379 (442)
T ss_pred hhHHHHHHHHHHHH----HHhHHHH---HHHHHHHHHHHHHHHhh----c-----CCceeecccceeE-EEEEEecccCC
Confidence 99999988888642 1222222 23333334444443321 0 0002222222211 1111 11 1
Q ss_pred C------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHH
Q 024997 205 E------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRL 252 (259)
Q Consensus 205 ~------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l 252 (259)
. ....+.+.++++|+.+--|.-++ +.+||+.- .++++++.+++..
T Consensus 380 ~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G---~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 380 PKPPATAEGAVIGEQCKELGVLVGKGGIHG---NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred CCCcchHHHHHHHHHHHHhCeeeecccccc---eEEEecCCeeccHHHHHHHHHHH
Confidence 1 23556677778999994444333 58999963 3889987777644
No 337
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.79 E-value=4.1e-07 Score=85.59 Aligned_cols=197 Identities=14% Similarity=0.092 Sum_probs=118.5
Q ss_pred CceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCc-c
Q 024997 35 THLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAG-S 99 (259)
Q Consensus 35 ~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G-~ 99 (259)
+..+ +|..| +.-.|.+. .++|+++|+++|.||++ |+.-...+. +..+..=-+-+++|.++ .| +
T Consensus 584 ~iAA-vI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLt-gG~~ 661 (817)
T PLN02974 584 HIAA-LIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLT-GGLV 661 (817)
T ss_pred CEEE-EEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeeccccc-CCCC
Confidence 4555 56666 45445554 28999999999999999 532221111 11111122778999997 78 6
Q ss_pred eEEEEEecCHHHHHHHHH------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH----H
Q 024997 100 RFGWAVIKDEAVYQRMSA------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII----S 169 (259)
Q Consensus 100 R~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~ 169 (259)
.+|.+++. +++.+.+.. .....+++.+++.-+++.+.|+... .++..+...+.-++..+.+.+.| +
T Consensus 662 Plaa~l~~-~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~---~~~~~~~l~~~~~~l~~~l~~~l~~~l~ 737 (817)
T PLN02974 662 PLAATLAT-EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK---DPSTNPNLIPPGSRLRELWDEELVRAIS 737 (817)
T ss_pred ccEEEEEc-HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHH---cccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999 799998852 2245678889999999988888652 22233333333333333333333 3
Q ss_pred hcCCCccccccccccccceeeCCCCCeeEEEecCCC------c---hHHHHHHHH-HcCeeeecCCcccCCCCeEEEEee
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------E---DKDCYGILK-AAKIIGREGKKFRAEARFVRLSLL 239 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~ll~-~~gi~~~~g~~f~~~~~~~Ris~~ 239 (259)
+++. +..+... |..+-+.+... + ...+.+.+. ++||.++|. + +.+|+...
T Consensus 738 ~~p~-------------V~~VRg~-Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----G-nvi~l~pP 797 (817)
T PLN02974 738 SLPN-------------VERVVSL-GTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-----G-NVVYLMCG 797 (817)
T ss_pred hCCC-------------eeEEEee-eeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----C-CEEEEeCC
Confidence 2221 2222322 33333333211 0 123344444 789999982 2 67887643
Q ss_pred c--ChhhHHHHHHHHHHHhh
Q 024997 240 K--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 240 ~--~~~~~~~~~~~l~~~l~ 257 (259)
. ++++++++++++.+.|+
T Consensus 798 ~~i~~e~l~~~~~~l~~~~~ 817 (817)
T PLN02974 798 PTTSPETCTRLLRKVYRRLS 817 (817)
T ss_pred CCCCHHHHHHHHHHHHHHhC
Confidence 3 89999999999988763
No 338
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.79 E-value=2.6e-07 Score=81.77 Aligned_cols=192 Identities=11% Similarity=0.066 Sum_probs=103.7
Q ss_pred CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCc
Q 024997 34 DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAG 98 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G 98 (259)
+++.++++.....-.|.+. .++|+++|+++|+||++ |+.....+. +.. .++ -+++|.+. .|
T Consensus 217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~-PDi--~~~gK~~~-~~ 292 (431)
T TIGR03251 217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQ-PDI--VAFGKKTQ-VC 292 (431)
T ss_pred CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCC-CCE--EEecccCc-cc
Confidence 4677755554454455543 38999999999999998 422211111 111 222 25788863 22
Q ss_pred ceEEEEEecCHHHHHHHHH-----hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC
Q 024997 99 SRFGWAVIKDEAVYQRMSA-----YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR 173 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 173 (259)
|++... ++.+.+.. .....+++.+++..+++.+.++...+ ++. .+.+++.-+++.+.|+++..
T Consensus 293 ---g~~~~~--~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l----~~~~~~~g~~l~~~L~~l~~ 360 (431)
T TIGR03251 293 ---GIMAGR--RVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE---ERL----VDNARVQGAHLLARLHELAA 360 (431)
T ss_pred ---eEEecc--hHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh---cCH----HHHHHHHHHHHHHHHHHHHH
Confidence 555533 33221211 11335577888888888888875421 223 23344444444444443210
Q ss_pred CccccccccccccceeeCCCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHH
Q 024997 174 FSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLH 250 (259)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~ 250 (259)
..+. .+...... |....+.+...+ ...+...+.++||.+.+. +.+.+|++.. .++++++++++
T Consensus 361 ----~~~~----~i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~-----g~~~lr~~P~l~~t~~eid~~l~ 426 (431)
T TIGR03251 361 ----EFPH----LVSNPRGR-GLMCAFDLPSTADRDEVIRQLYREGVLLLGC-----GERSIRFRPPLTVTREEIDAAID 426 (431)
T ss_pred ----hCcc----ceeccccc-ceeEEEEeCCHHHHHHHHHHHHhCCeEEecC-----CCCeEEEECCccCCHHHHHHHHH
Confidence 0000 01112233 444455554321 233444455789999762 2366888764 48999999999
Q ss_pred HHHHH
Q 024997 251 RLDEL 255 (259)
Q Consensus 251 ~l~~~ 255 (259)
++.++
T Consensus 427 ~l~~~ 431 (431)
T TIGR03251 427 AIRRV 431 (431)
T ss_pred HHHhC
Confidence 98763
No 339
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.73 E-value=4.2e-07 Score=75.96 Aligned_cols=206 Identities=15% Similarity=0.074 Sum_probs=125.1
Q ss_pred ccChhhhcccCC------CCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccccCCC----CCCCCC-CCC
Q 024997 22 EGEANLWGNASS------DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAYFWPH----FAPIPA-PAD 82 (259)
Q Consensus 22 ~~d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y~~~~----~~~~~~-~~~ 82 (259)
.++++++++.+. ..+.++++.|++|--|.+++ ++|+++|+.+..|.+=|+.. ...... ...
T Consensus 111 klt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~ 190 (342)
T COG2008 111 KLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSY 190 (342)
T ss_pred CcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhh
Confidence 677888888663 13455577777778899983 89999999999998864211 111111 234
Q ss_pred CeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCC--CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 83 EELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGV--SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
.+.+..++||..+.++ |.|++-+.++++++..++.....+. ..+..+....+|++ +-| ++...-++
T Consensus 191 ~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~------~~~---~~~~~Han 258 (342)
T COG2008 191 VDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALED------DVW---RLAADHAN 258 (342)
T ss_pred CCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc------cHH---HHHHHHHH
Confidence 5777888999987775 8888777899999877665433332 33333444445541 212 12222333
Q ss_pred --HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 161 --WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 161 --~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
...+.+.+++.+++ +...|.-.+.+++++++.. . +.++..|+...-|..-+.....+|+..
T Consensus 259 ~mA~~La~~~~~~~G~-------------~~~~~~~tN~vf~~l~~~~---i-~~l~~~~~~~~~~~~~~~~~~~vRfvt 321 (342)
T COG2008 259 AMAARLAEGLEAKPGV-------------KLAFPVETNMVFVRLPESA---I-EALRLAGALFYRGVLIGAHGEIVRFVT 321 (342)
T ss_pred HHHHHHHHhhhhcCCc-------------eeccCCcccEEEEECChHH---H-HHHHhhchhheeeeeccCCCceEEEEe
Confidence 66677777766553 3335555677788886531 1 223333333322221111114689887
Q ss_pred ec--ChhhHHHHHHHHHHHh
Q 024997 239 LK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 239 ~~--~~~~~~~~~~~l~~~l 256 (259)
+. +++++++++..+++++
T Consensus 322 s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 322 SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eccCCHHHHHHHHHHHHHhh
Confidence 55 8899999999998875
No 340
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.73 E-value=6.5e-07 Score=77.89 Aligned_cols=208 Identities=12% Similarity=0.056 Sum_probs=124.3
Q ss_pred hhhhcccC---C-CCceEEEEcCCC-CC-ChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEE
Q 024997 25 ANLWGNAS---S-DTHLVEFVTAPN-NP-DGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELM 86 (259)
Q Consensus 25 ~~~l~~~~---~-~~~~~i~i~~p~-NP-tG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~ 86 (259)
.++|++.+ . ++..+ ||.-|- -- .|.++ .++|++||+++|.||+- |+.-...+. +..+..=-
T Consensus 200 a~~le~~i~~~g~~~IAA-fI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PD 278 (449)
T COG0161 200 ADELEALILEHGPETIAA-FIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPD 278 (449)
T ss_pred HHHHHHHHHhcCcccEEE-EEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCC
Confidence 35566666 3 34455 777773 33 44444 28999999999999998 643333332 11111112
Q ss_pred EeccccccCCCcceEEEEEecCHHHHHHHHHh-----hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY-----ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+-+++|.+...=+.+|.+++. .++.+.+..- .+..++..+|++-+++++.|+-.. .+++ .++.++.-
T Consensus 279 i~~~aKGLT~GY~Pl~a~l~~-~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e---~e~l----~~~~~~~~ 350 (449)
T COG0161 279 ILCLAKGLTGGYLPLSAVLTS-DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE---EEDL----LERVAEIG 350 (449)
T ss_pred eeeecccccccchhhHhHhhh-HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH---hcCH----HHHHHHHH
Confidence 667889885344556767777 5888887663 345678889988888888887652 3344 44444555
Q ss_pred HHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCC-c---------hHHHHHHHHHcCeeeecCCcccCC
Q 024997 162 ENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E---------DKDCYGILKAAKIIGREGKKFRAE 230 (259)
Q Consensus 162 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~ll~~~gi~~~~g~~f~~~ 230 (259)
.++.+.|++ +.+ ...+..++.. |+..-+.+... + ...+...+.++|+.+||. +
T Consensus 351 ~~l~~~L~~~l~~----------~p~VgdVR~~-Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g-- 414 (449)
T COG0161 351 AYLQAGLQAALAD----------HPLVGDVRGL-GLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---G-- 414 (449)
T ss_pred HHHHHHHHHhccc----------CCcEEEeecc-ceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec---C--
Confidence 555555554 221 0112223333 33333333211 1 346666777899999994 2
Q ss_pred CCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 231 ARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 231 ~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+=++. ..++++++++++++.+.+++
T Consensus 415 -~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 415 -DVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred -CEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 2333332 23889999999999988764
No 341
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=9.5e-07 Score=72.80 Aligned_cols=207 Identities=14% Similarity=0.087 Sum_probs=126.3
Q ss_pred ChhhhcccCCC-CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeecccc--CCCC--CCCC--C-CCCCeE
Q 024997 24 EANLWGNASSD-THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAYF--WPHF--APIP--A-PADEEL 85 (259)
Q Consensus 24 d~~~l~~~~~~-~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y~--~~~~--~~~~--~-~~~~~i 85 (259)
|.++|+.+++. .... ++..| +--.|.+. .+||.+||.++|.||++- +... .... + .+|.+
T Consensus 195 d~eale~~l~~~~vaa-FivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDiv- 272 (427)
T KOG1402|consen 195 DAEALEVALKSPNVAA-FIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIV- 272 (427)
T ss_pred CHHHHHHHhcCCCeeE-EEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeE-
Confidence 46778888854 5666 66666 44444444 399999999999999982 2221 1111 1 23322
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
-+.|.++.-=..+..+.++ .+++-.++.-.+..+++.+++.-+++.++|+.+.+ +...++-.+.-+.++
T Consensus 273 ---ilgKalSGG~~Pvsavl~~-~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e-------ekL~era~~lG~~l~ 341 (427)
T KOG1402|consen 273 ---ILGKALSGGVYPVSAVLAD-DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE-------EKLVERAAKLGEILR 341 (427)
T ss_pred ---EEeccccCCeeeeEEEEec-HHHHhccCCCccccccCCChHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 2457775333457778888 59998888877888899999999999999885411 122334444445555
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--c-hH--HHHHHHHHcCeeeecCCcccCCCCeEEEEe--
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--E-DK--DCYGILKAAKIIGREGKKFRAEARFVRLSL-- 238 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-- 238 (259)
..|..++. .+ -.+++.+... |++..+.+... + .+ .....++++|++..|-. .+-+|++.
T Consensus 342 ~~L~~l~~----~~----p~~v~~VRGr-Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH-----~~IiRfaPPL 407 (427)
T KOG1402|consen 342 DQLNKLQK----KF----PHVVKEVRGR-GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH-----GNIIRFAPPL 407 (427)
T ss_pred HHHHhccc----cc----cchhheeecc-ceEEEEEeccccccchhHHHHHHcccccccccCCCC-----CCeEEecCCc
Confidence 66665541 11 1112333333 44444444321 1 11 12233556788777622 36889996
Q ss_pred ecChhhHHHHHHHHHHHhh
Q 024997 239 LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~ 257 (259)
..++++++++++.+.+.+.
T Consensus 408 ~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 408 VISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccCHHHHHHHHHHHHHHhc
Confidence 3389999999999988764
No 342
>PLN02452 phosphoserine transaminase
Probab=98.66 E-value=3e-06 Score=73.22 Aligned_cols=205 Identities=11% Similarity=0.021 Sum_probs=128.9
Q ss_pred CCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHH
Q 024997 33 SDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAV 111 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~ 111 (259)
+++.+.+.+++-.-.||..+..+..--++.+|+|.+. +......+ +..+ +...|.-|.+|.+| +|++++. +++
T Consensus 143 ~~~~~~v~~~hnETstGv~~~~~~~i~~~~lvVDa~Ss~g~~pidv-~~~~--v~~~saqK~lGP~G--l~~v~vr-~~~ 216 (365)
T PLN02452 143 TPDAKFVHICANETIHGVEFKDYPDVGNVPLVADMSSNFLSKPVDV-SKYG--VIYAGAQKNVGPSG--VTIVIIR-KDL 216 (365)
T ss_pred CCCCcEEEECCCCCCCcEecCcccccCCCeEEEECCccccCcccCH-HHcC--EEEEecccccCCCC--eEEEEEc-HHH
Confidence 3466776666666799997543322224899999866 22111111 2222 34469999999999 8999999 688
Q ss_pred HHHHHHh-------hh----hhc-CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 024997 112 YQRMSAY-------IS----LNT-MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEI 179 (259)
Q Consensus 112 ~~~~~~~-------~~----~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 179 (259)
++.+... .. ... .-++...-++...+++...+ +.-++.+.++.++..+.+.+.|++..++-....
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~---~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~ 293 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLA---QGGLKAMEKRNIRKADLLYDAIDESNGFYVCPV 293 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 7765321 10 011 23344555556666665422 112677888999999999999987654300000
Q ss_pred cccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 180 APQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.+ ...+.+.+.+.+++. ..+.+.+.++++|+...+|..-- + + +|+|+=. +.++++.+++.++++-
T Consensus 294 ~~---------~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~-g-g-~R~s~yna~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 294 EK---------SVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSV-G-G-MRASIYNAMPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred Ch---------HHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCcccc-C-c-eEEECcCCCCHHHHHHHHHHHHHHH
Confidence 00 113455556666553 35677788889999999987553 2 3 9999733 8999999999998876
Q ss_pred hh
Q 024997 257 SK 258 (259)
Q Consensus 257 ~~ 258 (259)
++
T Consensus 362 ~~ 363 (365)
T PLN02452 362 AK 363 (365)
T ss_pred Hh
Confidence 53
No 343
>PLN03032 serine decarboxylase; Provisional
Probab=98.55 E-value=7.7e-06 Score=70.79 Aligned_cols=200 Identities=15% Similarity=0.068 Sum_probs=119.5
Q ss_pred cccChhhhcccCCC---CceEEEEcCCCCCChhhH-----HHhhcCCC-----cEEEeeccccC---C---CCCCCCCCC
Q 024997 21 FEGEANLWGNASSD---THLVEFVTAPNNPDGQMN-----KAVLKGPY-----AKSIYDHAYFW---P---HFAPIPAPA 81 (259)
Q Consensus 21 ~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~-----~~la~~~~-----~~vi~De~y~~---~---~~~~~~~~~ 81 (259)
..+|+++|++.+++ .+.+++++..+|+||.+- .++|+++| +|+.+|.+|.+ + ....+....
T Consensus 144 g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~ 223 (374)
T PLN03032 144 GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRK 223 (374)
T ss_pred CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCc
Confidence 57899999999854 577888888999999998 38898886 59999999821 1 011111122
Q ss_pred CCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhh-----cCCCCHHHH--HHHHHHHHHHHhcCCcchHHHH
Q 024997 82 DEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLN-----TMGVSRECQ--LRAFKLLKVVLEDGGNNIFEFG 153 (259)
Q Consensus 82 ~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~q--~~~~~~l~~~~~~~~~~~~~~~ 153 (259)
.-+-+..|.+|.+| ..| +|.++.. ++..+.+.....+. +...|.... ..+-..++.. +.+-+.+.
T Consensus 224 ~vDSis~s~HK~~g~P~g--~G~ll~r-~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~----G~~g~~~~ 296 (374)
T PLN03032 224 PIGSVSVSGHKFLGCPMP--CGVALTR-KKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRK----GYRGIKRD 296 (374)
T ss_pred CCcEEEECcccccCCCcC--eEEEEEE-chhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHh----CHHHHHHH
Confidence 34667889999988 555 8999988 46666553321111 122222211 1122222321 33456667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCe
Q 024997 154 YNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARF 233 (259)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~ 233 (259)
.++..+..+++.+.|++.+. -....|.. ..+.+..+. .+. +. .|..+.+ .++.
T Consensus 297 ~~~~~~~a~~l~~~l~~~~~-------------~~~~~p~~-~~V~f~~~~--~~~----~~-~~w~l~~------~~~~ 349 (374)
T PLN03032 297 VQHCMRNAHYLKDRLTEAGL-------------TCRLNELS-STVVFERPM--DEA----FI-KKWQLAC------EGDI 349 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCC-------------cEEECCCc-eEEEEcCCC--cHh----Hh-heeeecc------cCCE
Confidence 77888888888888887541 11223333 223333321 121 21 3554443 1258
Q ss_pred EEEEeec--ChhhHHHHHHHHHH
Q 024997 234 VRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 234 ~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
+|+.+.. +.+.+++.++-|++
T Consensus 350 ~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 350 AHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EEEEECCCCCHHHHHHHHHHHhc
Confidence 9999876 66778888877764
No 344
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.55 E-value=4.8e-06 Score=78.63 Aligned_cols=215 Identities=7% Similarity=-0.003 Sum_probs=123.5
Q ss_pred ccChhhhcccCC---CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEecccc
Q 024997 22 EGEANLWGNASS---DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISK 92 (259)
Q Consensus 22 ~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK 92 (259)
.+|+++|++.++ +++.+|.+++|++-.+... .++|+++|+.+++|.+.. +......+...+.+++.+++.|
T Consensus 625 ~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HK 704 (954)
T PRK12566 625 NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHK 704 (954)
T ss_pred CcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCc
Confidence 578899999985 5778888888887766433 388999999999999883 2222222245667999999999
Q ss_pred ccCC----CcceEEEEEecCHHHHHHHHHhh---------hhhcCCCCHHHH----HHHHHHHHHHHhcCCcchHHHHHH
Q 024997 93 LTGH----AGSRFGWAVIKDEAVYQRMSAYI---------SLNTMGVSRECQ----LRAFKLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 93 ~~g~----~G~R~G~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~q----~~~~~~l~~~~~~~~~~~~~~~~~ 155 (259)
.|+. -|.-+|.+... +++.+.+.... +....+.....| .++..++... +.+ +.+..+
T Consensus 705 tf~~P~G~GGP~vG~iav~-~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~l----G~e-Lk~aa~ 778 (954)
T PRK12566 705 TFCIPHGGGGPGMGPIGVR-AHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMM----GPQ-LADASE 778 (954)
T ss_pred ccCcCccCCCCccchhhhh-hhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHH----CHH-HHHHHH
Confidence 8852 24446776666 46666554321 001111111122 2233333321 222 333333
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC--eeEEEecC---C---Cc-hHHHHHHHHHcCeeeecCCc
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP--AYAWVKCE---R---EE-DKDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~---~~-~~~~~~ll~~~gi~~~~g~~ 226 (259)
.-..+..++.+.|++... + ...++.+. .-..+++. . .+ .+..++|+ ++||..-- ..
T Consensus 779 ~ailnAnYla~rL~~~~~--v-----------~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~-d~Gihapt-~~ 843 (954)
T PRK12566 779 VAILSANYLANQLGGAFP--V-----------LYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLM-DYGFHAPT-MS 843 (954)
T ss_pred HHHHHHHHHHHHhHhhCC--C-----------CcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHH-HCCcEEeE-Ee
Confidence 334566677777765221 1 11111111 11112222 1 22 34555555 88997543 34
Q ss_pred ccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 227 FRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 227 f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|. ..+.+|++..- ++++++..++.++++.++
T Consensus 844 fP-v~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 844 FP-VPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred ec-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 44 36899999854 889999999999877653
No 345
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.50 E-value=1.7e-05 Score=75.35 Aligned_cols=226 Identities=10% Similarity=-0.009 Sum_probs=125.1
Q ss_pred hhhhccCccc------ccccChhhhcccCC---CCceEEEEcCCCCCChhhH------HHhhcCCCcEEEeeccccC-CC
Q 024997 10 QTDYFESVDY------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMN------KAVLKGPYAKSIYDHAYFW-PH 73 (259)
Q Consensus 10 ~~~~~g~~~~------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~------~~la~~~~~~vi~De~y~~-~~ 73 (259)
.+...|.++. ...+|+++|++.++ +++++|++++||| +|.+- .++|+++|.++++|.++.. ..
T Consensus 594 sa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~ 672 (939)
T TIGR00461 594 SAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV 672 (939)
T ss_pred HHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC
Confidence 3555565542 24688999999995 4889999999999 88864 3889999999999998831 22
Q ss_pred CCCCCCCCCCeEEEeccccccC----CCcceEEEEEecCHHHHHHHHHhhh---------------hhcCCCCH-HHHHH
Q 024997 74 FAPIPAPADEELMIFTISKLTG----HAGSRFGWAVIKDEAVYQRMSAYIS---------------LNTMGVSR-ECQLR 133 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~SK~~g----~~G~R~G~i~~~~~~~~~~~~~~~~---------------~~~~~~~~-~~q~~ 133 (259)
....++..+-+++.+|..|.|+ .-|=-+|++.+. +++...+-.... ....+... .....
T Consensus 673 ~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr-~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~ 751 (939)
T TIGR00461 673 GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-SHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPI 751 (939)
T ss_pred CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh-hhchhhcCCCcccccccCCCCccccccccccccCcHHHHHH
Confidence 2222345667999999999654 122238999988 566655431100 00001111 11111
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC-ee-EEEecCC------C
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP-AY-AWVKCER------E 205 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~------~ 205 (259)
+...+... +.+-+.+.-+.--.+..++.+.|++... .+.+ .+.+. ++ +.++++. .
T Consensus 752 a~~yi~~l----G~~GL~~~a~~ailnAnYl~~rL~~~~~----~l~~---------~~~~~~~hEfv~~~~~~~~~~g~ 814 (939)
T TIGR00461 752 SWMYIKMM----GNEGLPKASVVAILNANYMATRLKDHYP----ILFV---------GTLKHVAHECILDLRPLKAKTGI 814 (939)
T ss_pred HHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHhhccCc----cccc---------CCCCceeEEEEEeccchhhhcCC
Confidence 22222221 2222333344444566666777764221 0000 00111 11 2334441 1
Q ss_pred c-hHHHHHHHHHcCeeeecCCcccCCC-CeEEEEeecChhhHHHHHHHHHHHh
Q 024997 206 E-DKDCYGILKAAKIIGREGKKFRAEA-RFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~-~~~~~~ll~~~gi~~~~g~~f~~~~-~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
. .+..++++ ++|+..-. ..|...+ -.+|.+-..++++++..++.+.++-
T Consensus 815 ~~~dIakrL~-d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~ 865 (939)
T TIGR00461 815 EAIDVAKRLQ-DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIK 865 (939)
T ss_pred CHHHHHHHHH-hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHH
Confidence 2 44555555 68997433 3344322 2355555558899998888887653
No 346
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.47 E-value=7.6e-06 Score=73.84 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=91.9
Q ss_pred ccccChhhhcccCC----CCceEEEEc--CCCCCChhhH-----HHhhcCCCcEEEeeccccC-----CCCCC-CCCCCC
Q 024997 20 KFEGEANLWGNASS----DTHLVEFVT--APNNPDGQMN-----KAVLKGPYAKSIYDHAYFW-----PHFAP-IPAPAD 82 (259)
Q Consensus 20 ~~~~d~~~l~~~~~----~~~~~i~i~--~p~NPtG~~~-----~~la~~~~~~vi~De~y~~-----~~~~~-~~~~~~ 82 (259)
.+.+|+++|++.+. .+++.+.++ .-++.||.+- .++|+++|+|+.+|.+|-+ +.... +.+...
T Consensus 244 ~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~ 323 (522)
T TIGR03799 244 NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIER 323 (522)
T ss_pred CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchh
Confidence 35789999998873 344433333 4567999997 3899999999999999821 11111 223335
Q ss_pred CeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhh-----------hcCCCCHHHHH-HHHHHHHHHHhcCCcch
Q 024997 83 EELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISL-----------NTMGVSRECQL-RAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 83 ~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~q~-~~~~~l~~~~~~~~~~~ 149 (259)
-+.+..|..|.+ +..| +|.++..++++.+.+.....+ .+...+..... ..-..++.. ...-
T Consensus 324 aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~l----G~~G 397 (522)
T TIGR03799 324 ADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHII----GRKG 397 (522)
T ss_pred CCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHH----hHHH
Confidence 578899999954 5555 888888756666655431111 01111221111 122233321 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
+++..++..+..+++.+.|++.+++.+
T Consensus 398 ~~~ii~~~~~la~~l~~~L~~~~~~el 424 (522)
T TIGR03799 398 YELLIDQSIEKAKYFADLIQQQPDFEL 424 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 677788888889999999988776543
No 347
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.47 E-value=1.3e-05 Score=76.85 Aligned_cols=232 Identities=7% Similarity=-0.034 Sum_probs=126.9
Q ss_pred hhhhhccCccc------ccccChhhhcccCCC---CceEEEEcCCCCCChhh--H---HHhhcCCCcEEEeecccc-CCC
Q 024997 9 EQTDYFESVDY------KFEGEANLWGNASSD---THLVEFVTAPNNPDGQM--N---KAVLKGPYAKSIYDHAYF-WPH 73 (259)
Q Consensus 9 ~~~~~~g~~~~------~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~--~---~~la~~~~~~vi~De~y~-~~~ 73 (259)
..+.+.|.++. ...+|.++|++.+.+ ++.+|++++|++-.+.. + .++|+++|+++++|.++. +..
T Consensus 605 ~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~ 684 (954)
T PRK05367 605 ASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQV 684 (954)
T ss_pred HHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhcc
Confidence 34555666542 236778889888843 57788899998764432 2 488999999999999883 111
Q ss_pred CCCCCCCCCCeEEEeccccccC------CCcceEEEEEecCHHHHHHHHHhhh--------hhcCCCCHHHHHHH----H
Q 024997 74 FAPIPAPADEELMIFTISKLTG------HAGSRFGWAVIKDEAVYQRMSAYIS--------LNTMGVSRECQLRA----F 135 (259)
Q Consensus 74 ~~~~~~~~~~~i~~~S~SK~~g------~~G~R~G~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~q~~~----~ 135 (259)
...-+...+-+++.+|..|.|+ .|| +|.+.+. +++...+-.... ....+.+++.|... .
T Consensus 685 ~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg--~G~l~vr-~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~ 761 (954)
T PRK05367 685 GLARPGDIGADVSHLNLHKTFCIPHGGGGPG--VGPIGVK-AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISW 761 (954)
T ss_pred CCCChhhcCCCEEEecCcccCCCCcCCCCCc--eEEEeec-ccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHH
Confidence 1111234456889999999964 344 7888887 466554433210 11122233333222 1
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---CchHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EEDKDCYG 212 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 212 (259)
.++... +.+-+.+..+.--.+..++.+.|++... +....+.+ . .....++-+..++. ...+.+.+
T Consensus 762 ~yi~~~----G~~Glr~~a~~~~~~A~Yl~~~L~~~~~--~~~~~~~~----~--~~~e~i~~~~~~~~~~g~~~~di~k 829 (954)
T PRK05367 762 MYIRMM----GAEGLRQATEVAILNANYIAKRLKDHYP--VLYTGANG----R--VAHECILDLRPLKESTGITVDDIAK 829 (954)
T ss_pred HHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHhhcC--ccccCCCC----C--cccceEEEeecccccCCCCHHHHHH
Confidence 222211 2222333333344677777777765321 11000000 0 00111122222222 12344455
Q ss_pred HHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 213 ILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.|.++|+.... ..|.. .+.+||++.- ++++++..++.++.+..
T Consensus 830 rL~d~G~~~~t-~~~pv-~~~l~i~ptE~~s~~elDr~~~al~~i~~ 874 (954)
T PRK05367 830 RLIDYGFHAPT-MSFPV-AGTLMVEPTESESKAELDRFCDAMIAIRA 874 (954)
T ss_pred HHHHCCCeEee-cCCcc-CCEEEEEeeecCCHHHHHHHHHHHHHHHH
Confidence 55678997654 33543 5789999854 88999999888877654
No 348
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.44 E-value=1.6e-05 Score=64.04 Aligned_cols=221 Identities=11% Similarity=0.087 Sum_probs=127.5
Q ss_pred cccChhhhcccC----C---CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEE
Q 024997 21 FEGEANLWGNAS----S---DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMI 87 (259)
Q Consensus 21 ~~~d~~~l~~~~----~---~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~ 87 (259)
|.++++...+.+ + +.+.+.+++.|.---|.+. +++|+++|+.++..-+|- +.-..+. .....++++
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~-ke~g~DFiV 213 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSG-KEIGADFIV 213 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccc-cccCCCEEE
Confidence 677776544444 2 3478889999987778777 489999999999999992 2222222 234568999
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhh-h------hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH--
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-S------LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK-- 158 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-~------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~-- 158 (259)
+|-.|++. +--.+|.+... ++..+.+.+.. . .-..+++.-. +-...++. ...++.++.++..
T Consensus 214 gSGHKsmA-As~PiGvl~~~-eE~ae~V~r~Sg~~~~~KEvellGCT~rG-apivTlmA------SfP~V~eRVkrWdeE 284 (382)
T COG1103 214 GSGHKSMA-ASAPIGVLAMS-EEWAEIVLRRSGRAFPKKEVELLGCTVRG-APIVTLMA------SFPHVVERVKRWDEE 284 (382)
T ss_pred ecCccchh-ccCCeeEEeeh-hHHHHHHHhhcccccccceeeeecccccC-chHHHHHh------cCHHHHHHHHHHHHH
Confidence 99999997 55589999999 68888775543 1 0011111111 11112222 1112222222222
Q ss_pred -HHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCee-eecCCcccCCCCeEEE
Q 024997 159 -KRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKII-GREGKKFRAEARFVRL 236 (259)
Q Consensus 159 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~-~~~g~~f~~~~~~~Ri 236 (259)
+..+.+...|+.++++......|...+.+.+..|. ++....-.....=++.+-|++.||. ++||. ..++.+
T Consensus 285 v~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~--f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~-----Tk~~K~ 357 (382)
T COG1103 285 VEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPV--FHEIAKKHKRKGYFLYEELKKRGIHGIQPGQ-----TKYFKL 357 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCch--HHHHHHhCcCCceeeHHHHHhcCccccccCc-----eeEEEE
Confidence 23445566677777654433333333332221111 1100000000123456667788885 44432 468899
Q ss_pred Eeec-ChhhHHHHHHHHHHHhhh
Q 024997 237 SLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 237 s~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
|+-. +.++++..++.+++++++
T Consensus 358 svyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 358 SVYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred EeecCCHHHHHHHHHHHHHHHHh
Confidence 9744 999999999999998875
No 349
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.43 E-value=0.00011 Score=60.36 Aligned_cols=228 Identities=10% Similarity=-0.011 Sum_probs=132.7
Q ss_pred hhhhccCccccc------ccChhhhcccC-CCCceEEEEcCCCCCChhhHH------HhhcCCCcEEEeeccc-cCCCCC
Q 024997 10 QTDYFESVDYKF------EGEANLWGNAS-SDTHLVEFVTAPNNPDGQMNK------AVLKGPYAKSIYDHAY-FWPHFA 75 (259)
Q Consensus 10 ~~~~~g~~~~~~------~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~------~la~~~~~~vi~De~y-~~~~~~ 75 (259)
+++..|++++.. ....+.+.+.+ ..+++++++++-..-||...+ ++|++|++++++|.+- .+ ..
T Consensus 110 ~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlg--gt 187 (385)
T KOG2862|consen 110 CARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLG--GT 187 (385)
T ss_pred HHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcC--Cc
Confidence 444556665332 34457777777 458999999999999999874 8999999999999865 21 11
Q ss_pred CCC-CCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhh-----------------------hhcCCCCHHH
Q 024997 76 PIP-APADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYIS-----------------------LNTMGVSREC 130 (259)
Q Consensus 76 ~~~-~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 130 (259)
.+. +.+..++.....-|++| .+|+ +-+..+ ....++++..+. ....-+|...
T Consensus 188 ~F~mDewgVDvaytgSQKaL~aP~GL--siisfS-~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~l 264 (385)
T KOG2862|consen 188 EFEMDEWGVDVAYTGSQKALGAPAGL--SIISFS-DKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQL 264 (385)
T ss_pred cceehhhcccEEEecchhhcCCCCCc--ceeecC-HHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHH
Confidence 121 45555666666679986 4774 447777 466676665321 0011122222
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-CCCCeeEEEecCCC-ch-
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE-ED- 207 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~- 207 (259)
-+..-++|.... ++=++...++.++..+.+...|+.++- .. +..-+ ....-...+..+.. |.
T Consensus 265 ly~Lr~AL~~I~----eeGL~~~~~rH~e~s~~l~~~l~~~GL-q~----------fv~~e~~rlptvttv~vp~gvDw~ 329 (385)
T KOG2862|consen 265 LYSLRAALALIA----EEGLENSWRRHREMSKWLKLSLEALGL-QL----------FVVDEELRLPTVTTVKVPYGVDWK 329 (385)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCc-cc----------eecChhhccCcceeeecCCCCCHH
Confidence 233444444332 234566777888888888888887551 00 11111 11111223333332 54
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.++...+++-+-- -.-...+..+||.+.. +.+.++..++.|+..+.+
T Consensus 330 dVv~~~~~~~~vei~g-glg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 330 DVVAYAMSHYVVEIGG-GLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHHHHHhcCEEecc-ccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 4455555443554432 2222245789999743 778889888888877643
No 350
>PLN02880 tyrosine decarboxylase
Probab=98.42 E-value=2.3e-05 Score=70.38 Aligned_cols=215 Identities=13% Similarity=0.084 Sum_probs=123.0
Q ss_pred ccccChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc-----CCCCC-CCCCCCC
Q 024997 20 KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF-----WPHFA-PIPAPAD 82 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~-----~~~~~-~~~~~~~ 82 (259)
.+.+|++.|++.+.+ .+.+|+-+..+-+||.+- .++|+++|+|+.+|.+|- .+.+. .+.+...
T Consensus 218 ~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~ 297 (490)
T PLN02880 218 NYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEE 297 (490)
T ss_pred CCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchh
Confidence 467999999988832 245656666678999986 389999999999999991 11111 1223344
Q ss_pred CeEEEeccccccCCCcceEEEEEecCHH-HHHHHHHhhhhhcC-----------------CCCHHHHHHHHHH---HHHH
Q 024997 83 EELMIFTISKLTGHAGSRFGWAVIKDEA-VYQRMSAYISLNTM-----------------GVSRECQLRAFKL---LKVV 141 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~G~i~~~~~~-~~~~~~~~~~~~~~-----------------~~~~~~q~~~~~~---l~~~ 141 (259)
-+-+..+++|.++ .-.-+|++...+.+ +...+.....++.. ....+. ++.+ ++..
T Consensus 298 aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~---alklw~~l~~~ 373 (490)
T PLN02880 298 ADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFR---SLKLWMVLRLY 373 (490)
T ss_pred cCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCccc---HHHHHHHHHHh
Confidence 5778999999985 55668888877533 22333221111100 000110 1222 2321
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----------chHHHH
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----------EDKDCY 211 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 211 (259)
+.+-+.++.++..+..+++.+.+++.+++.+. .+++.++ +.+.++.. +.+...
T Consensus 374 ----G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~------------~~~~~~i-v~Fr~~~~~~~~~~~~~~n~~l~~ 436 (490)
T PLN02880 374 ----GVENLQSYIRNHIKLAKEFEQLVAQDSRFEVV------------TPRIFSL-VCFRLVPPKNNEDNGNKLNHDLLD 436 (490)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe------------cCCceEE-EEEEEeCCCCChhhHHHHHHHHHH
Confidence 33345555555568888888888776653221 1223333 23333211 123344
Q ss_pred HHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhh
Q 024997 212 GILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~ 257 (259)
++.++..+.+.+ ..+ .+..++|+|+.. ++++++.+++.|.+..+
T Consensus 437 ~l~~~g~~~v~~-t~~-~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~ 483 (490)
T PLN02880 437 AVNSSGKIFISH-TVL-SGKYVLRFAVGAPLTEERHVTAAWKVLQDEAS 483 (490)
T ss_pred HHHhCCCEEEEE-EEE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 444444555544 222 245799999865 56889999998877543
No 351
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.39 E-value=9.2e-06 Score=68.94 Aligned_cols=139 Identities=13% Similarity=0.069 Sum_probs=94.9
Q ss_pred cChhhhcccCCC---CceEEEEcCCCC-CChhhH---------HHhhcCCCcEEEeeccc--cCCCCCC-----CCCCCC
Q 024997 23 GEANLWGNASSD---THLVEFVTAPNN-PDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAP-----IPAPAD 82 (259)
Q Consensus 23 ~d~~~l~~~~~~---~~~~i~i~~p~N-PtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~-----~~~~~~ 82 (259)
-|...|++.++. ...+ +|..|-- --|.+. .++|+++|+++|.||++ |+..... +.-.+|
T Consensus 191 nd~t~l~k~~~~h~~~IaA-VIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD 269 (433)
T KOG1401|consen 191 NDSTALEKLFESHKGEIAA-VIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD 269 (433)
T ss_pred CCHHHHHHHHHhCCCceEE-EEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc
Confidence 346677777733 3466 5556643 444443 28899999999999998 4322111 111233
Q ss_pred CeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh---hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 024997 83 EELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS---LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKK 159 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (259)
+.++.|.++ .|+.+|...+. .++.+.+..-.. ..+++.+++.-.++...++... ..+++++..+.-+.
T Consensus 270 ----I~t~aK~L~-gGlPigA~~v~-~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~---~~e~~k~vs~~~k~ 340 (433)
T KOG1401|consen 270 ----ITTVAKPLG-GGLPIGATGVR-DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK---DPETLKNVSKIGKE 340 (433)
T ss_pred ----ceeehhhcc-CCceeEEEeeh-HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc---CHHHHHHHHHHHHH
Confidence 788999998 89999999999 599998876444 6678889998888888888763 33565656666666
Q ss_pred HHHHHHHHHHhc
Q 024997 160 RWENLSKIISLS 171 (259)
Q Consensus 160 ~~~~~~~~l~~~ 171 (259)
.++.+.+.+.+.
T Consensus 341 L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 341 LRKLLDEYLKKT 352 (433)
T ss_pred HHHHHHHHhccC
Confidence 666666666543
No 352
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.33 E-value=8e-05 Score=64.06 Aligned_cols=205 Identities=14% Similarity=0.045 Sum_probs=130.9
Q ss_pred CCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHH
Q 024997 33 SDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAV 111 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~ 111 (259)
+++.+.+.+|+-.-.||..++++.+.++.++|+|.+- .+.+.+ +..+-.++..+.=|.+|.+| ++.++.. +++
T Consensus 141 ~~d~~~v~~t~NETstGv~~~~~~~~~~~llvvD~sS---~~~s~pid~~~~dvi~agsQKnlgP~G--ltvvivs-~~a 214 (364)
T PRK12462 141 DARAPFRHYVSNETVEGLQFPDAAGLPDSPLIADMSS---DFMSRPFDVEAYGMVYAHAQKNLGPAG--VTVAIIR-RAL 214 (364)
T ss_pred CCCCcEEEEccCCCCceEecCcccccCCCeEEEEcCc---hhhCCCCChHHccEEEeeccccCCCCc--eEEEEEC-HHH
Confidence 3456675666555689999887777779999999854 111111 11122778888899999999 7788888 577
Q ss_pred HHHHHHh-------h----hhhc-CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 024997 112 YQRMSAY-------I----SLNT-MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEI 179 (259)
Q Consensus 112 ~~~~~~~-------~----~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 179 (259)
+++.... . .... .-++...-+++...++.+++. ..=++...++.++..+.+++.+++..++-....
T Consensus 215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e--~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~ 292 (364)
T PRK12462 215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDE--IGGVHAMRDINARKAAMLYATLDALNEVIDCHA 292 (364)
T ss_pred HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 7654331 1 1112 234455556666666654321 012566778888889999999988764221111
Q ss_pred cccccccceeeCCCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHh
Q 024997 180 APQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELI 256 (259)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l 256 (259)
....++-+-+.+++.+.. .+.+.+.++++|+....|..- -|.+|+|+= .+.+.++.+++-++++-
T Consensus 293 ---------~~~~RS~mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr~---vgg~Ras~yna~~~e~v~~L~~fm~~f~ 360 (364)
T PRK12462 293 ---------HRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHRS---IGGIRASLYNAVSEQAVSRLCAFLKDFA 360 (364)
T ss_pred ---------ChhhcCcceEEEEcCCHHHHHHHHHHHHHCCCccccCCcc---cCceEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 113455666777765542 456667777899988776533 255999983 38888888888888775
Q ss_pred h
Q 024997 257 S 257 (259)
Q Consensus 257 ~ 257 (259)
+
T Consensus 361 ~ 361 (364)
T PRK12462 361 I 361 (364)
T ss_pred H
Confidence 4
No 353
>PLN02590 probable tyrosine decarboxylase
Probab=98.32 E-value=7.8e-05 Score=67.47 Aligned_cols=218 Identities=9% Similarity=0.079 Sum_probs=123.2
Q ss_pred ccccChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc--c---CCCCCCC-CCCCC
Q 024997 20 KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY--F---WPHFAPI-PAPAD 82 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y--~---~~~~~~~-~~~~~ 82 (259)
.+.+|+++|++.+.+ .+.+|+-+..+-+||.+= .++|+++|+|+.+|.+| + .+..... .+...
T Consensus 266 ~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ 345 (539)
T PLN02590 266 NYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN 345 (539)
T ss_pred CCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc
Confidence 368999999988832 245655555677899885 48999999999999999 2 1222111 12333
Q ss_pred CeEEEeccccccCCCcceEEEEEecCH-HHHHHHHHhhhhh----------------cCCCCH-HHHHHHHHHHHHHHhc
Q 024997 83 EELMIFTISKLTGHAGSRFGWAVIKDE-AVYQRMSAYISLN----------------TMGVSR-ECQLRAFKLLKVVLED 144 (259)
Q Consensus 83 ~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~~~~~~~~~~----------------~~~~~~-~~q~~~~~~l~~~~~~ 144 (259)
-.=+....+|.+. ...-+|.+...++ .+.+.+.....++ +...+. +.....-..++..
T Consensus 346 ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~--- 421 (539)
T PLN02590 346 ADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLY--- 421 (539)
T ss_pred CCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHH---
Confidence 3456778899986 5566888887754 3334332211111 111111 1111111122221
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--Cc-------hHHHHHHHH
Q 024997 145 GGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EE-------DKDCYGILK 215 (259)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~ll~ 215 (259)
+.+-+.+..++..+..+++.+.+++.+.+.+ ..+..-.-++++... .+ ...+.+.+.
T Consensus 422 -G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel-------------~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~ 487 (539)
T PLN02590 422 -GSENLRNFIRDHVNLAKHFEDYVAQDPSFEV-------------VTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVN 487 (539)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-------------ecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 2345667777888888888888887765332 222222222333221 01 122333333
Q ss_pred HcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHh
Q 024997 216 AAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELI 256 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l 256 (259)
+.|......... .+..++|+++.. ++++++.+++.|.+.-
T Consensus 488 ~~G~~~vs~t~~-~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a 530 (539)
T PLN02590 488 STGKIFISHTAL-SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 530 (539)
T ss_pred hCCCEEEEeeEE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 445544332222 245689999965 7888999999988754
No 354
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.27 E-value=0.00016 Score=62.71 Aligned_cols=224 Identities=13% Similarity=0.064 Sum_probs=132.6
Q ss_pred hhhhhccCc-c----ccc--ccChhhhcccCCCCceEEEEcCCCCCChhhHH--HhhcC-CCcEEEeeccc-cCCCCCCC
Q 024997 9 EQTDYFESV-D----YKF--EGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--AVLKG-PYAKSIYDHAY-FWPHFAPI 77 (259)
Q Consensus 9 ~~~~~~g~~-~----~~~--~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--~la~~-~~~~vi~De~y-~~~~~~~~ 77 (259)
.+++..|.. + .+| .+|+++++. + +.+++++---.||...+ +++++ ++.++|+|.+- ++.....
T Consensus 99 eia~~~g~~~v~~l~~~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~npv~~i~~~~~~~lliVDavSs~g~~~l~- 172 (374)
T TIGR01365 99 DVTKQLKLPDVRVLEAEYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVPNGDFIPADREGLTICDATSAAFAQDLD- 172 (374)
T ss_pred HHHHhcCCCCcEEEcCCCCCCCCHHHcCC----C-CCEEEecCCCchheeccccccccccCCCcEEEEccchhcCCCCC-
Confidence 444556662 3 233 466666662 1 12355655568888874 55654 58999999855 3211111
Q ss_pred CCCCCCeEEEeccccccCC-CcceEEEEEecCHHHHHHHHHhh----------------------hhhcCCCC-HHHHHH
Q 024997 78 PAPADEELMIFTISKLTGH-AGSRFGWAVIKDEAVYQRMSAYI----------------------SLNTMGVS-RECQLR 133 (259)
Q Consensus 78 ~~~~~~~i~~~S~SK~~g~-~G~R~G~i~~~~~~~~~~~~~~~----------------------~~~~~~~~-~~~q~~ 133 (259)
..+-++++.|.-|.+++ || +|++++. ++.+++..... ...+...+ ....++
T Consensus 173 --~d~iDv~~tgsQK~L~~ppG--ls~v~vs-~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a 247 (374)
T TIGR01365 173 --YHKLDVVTFSWQKVLGGEGA--HGMLILS-PRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVED 247 (374)
T ss_pred --hhHCcEEEEechhccCCCCc--eEEEEEC-HHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHH
Confidence 22368889999999964 66 7788888 57766654210 01112222 222333
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-------c
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-------E 206 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 206 (259)
+..+++...+. .=++.+.++.+++.+.+++.+++++.+.+. .. .-...+...+.+.++.. +
T Consensus 248 ~~~~l~~i~~e---gGle~~~~Rh~~~a~~l~~~l~~lg~l~~~--~~-------~~~~rS~tvt~v~~~~~~~~~~~~~ 315 (374)
T TIGR01365 248 WLDALKWAESI---GGLKPLIARADDNLAVLEAFVAKNNWIHFL--AE-------TPEIRSNTSVCLKVVDPAIDALDED 315 (374)
T ss_pred HHHHHHHHHHc---cCHHHHHHHHHHHHHHHHHHHHHCCCcccC--CC-------ChhhcCCCeEEEEeCCccccccccc
Confidence 44445432221 126778899999999999999988742211 10 00112333344444221 1
Q ss_pred -----hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 207 -----DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 207 -----~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.+.+...++++||.+.+|..--. +..+||+... +.++++.+++.|.=++
T Consensus 316 ~~~~~~~~~~~~l~~~gi~i~~G~~~~~-~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 316 AQADFAKELISTLEKEGVAYDIGSYRDA-PSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred hhhHHHHHHHHHHHHCCEEEeccccccC-CCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 45677788888999988765433 4789999644 8999999999886443
No 355
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.22 E-value=0.00014 Score=69.96 Aligned_cols=191 Identities=13% Similarity=0.080 Sum_probs=109.2
Q ss_pred CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccc-----cCCCcceEEEE
Q 024997 35 THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKL-----TGHAGSRFGWA 104 (259)
Q Consensus 35 ~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~-----~g~~G~R~G~i 104 (259)
++..+++.+| |-+|.+. .++|+++|+++++|-..........++..+-+|+++|..|. ||.|| .|++
T Consensus 206 ~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~--aGfl 282 (954)
T PRK05367 206 DVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPH--AAYF 282 (954)
T ss_pred cEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCC--EEEE
Confidence 4555555554 7899887 38899999999998633211122223555679999999998 77787 9999
Q ss_pred EecCHHHHHHHHHhh--------------------------hhhcCCCCHHHH-HHHHHH--HHHHHhcCCcchHHHHHH
Q 024997 105 VIKDEAVYQRMSAYI--------------------------SLNTMGVSRECQ-LRAFKL--LKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 105 ~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~q-~~~~~~--l~~~~~~~~~~~~~~~~~ 155 (259)
++. +++...+.... ...+.++.+.+. .++.+. +.. ....=+.+..+
T Consensus 283 avr-~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~----~g~~Gl~~Ia~ 357 (954)
T PRK05367 283 AVR-DAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVY----HGPEGLKAIAR 357 (954)
T ss_pred EEC-HHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH----HhhhhHHHHHH
Confidence 999 57776652110 001112211111 111111 111 01222455566
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
+...+..++.+.|+..+ +.+. . .+..+ -+.++++. +.+.+.+.|.++||.++. . ..+.+|
T Consensus 358 ~~~~la~~l~~~L~~~G-~~~~--~----------~~~f~-~~~~~~~~-~~~~i~~~l~~~gi~~~~---~--~~~~l~ 417 (954)
T PRK05367 358 RVHRLAAILAAGLRALG-LEVV--H----------DSFFD-TLTVEVGG-DAAAVLARALAAGINLRR---V--DDDHVG 417 (954)
T ss_pred HHHHHHHHHHHHHHhcC-cccC--C----------CCCCC-eEEEeCCC-CHHHHHHHHHHCCceecc---c--cCCEEE
Confidence 67777777777776532 2111 0 11111 22333432 345555556678998843 1 146799
Q ss_pred EEeec--ChhhHHHHHHHHH
Q 024997 236 LSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 236 is~~~--~~~~~~~~~~~l~ 253 (259)
+|+.. ++++++.+++.|.
T Consensus 418 is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 418 ISLDETTTREDLAALLAVFG 437 (954)
T ss_pred EEecccCCHHHHHHHHHHHc
Confidence 99854 8899999999886
No 356
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.18 E-value=2e-05 Score=66.52 Aligned_cols=210 Identities=11% Similarity=0.114 Sum_probs=121.6
Q ss_pred ccChhhhcccCCC---------C----ceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-c---CCCCCCCC-
Q 024997 22 EGEANLWGNASSD---------T----HLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-F---WPHFAPIP- 78 (259)
Q Consensus 22 ~~d~~~l~~~~~~---------~----~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-~---~~~~~~~~- 78 (259)
..|++.|+..+.+ + .++|++..-.-+||.+.+ ++..+|...+|.||.| | +..+..+.
T Consensus 207 hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvte 286 (467)
T KOG1358|consen 207 HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTE 286 (467)
T ss_pred CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccc
Confidence 4666777655521 1 356677777888999884 7888999999999999 5 22221111
Q ss_pred ----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh---hhcCCCCHHHHHHHHHHHHHHHhcCCcchHH
Q 024997 79 ----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS---LNTMGVSRECQLRAFKLLKVVLEDGGNNIFE 151 (259)
Q Consensus 79 ----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 151 (259)
...+-+++++|++-+++..| |+.++. .++-...+... -.+.+.++..-.++..++.. .++-.
T Consensus 287 H~~v~~~~iDiv~~sm~~alas~G---gFc~G~--~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i------~~~~p 355 (467)
T KOG1358|consen 287 HFGVPITDIDIVTASMETALASGG---GFCAGK--SFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI------EEWNP 355 (467)
T ss_pred cCCCCccceeeeeecccccccccC---ceeecc--eeeEeeeeccccceeeeccCchhhhhhHHHHHHH------HhhCc
Confidence 24566889999999998777 888875 33332333221 22334444444444444442 12222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-CCCCeeEEEecCCC------c----hHHHHHHHHHcCee
Q 024997 152 FGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE------E----DKDCYGILKAAKII 220 (259)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~----~~~~~~ll~~~gi~ 220 (259)
+..+.+++....+...|++..+ +.... +.+++ +.+.+... + .+.+...+.+ |+.
T Consensus 356 ~~~~~L~~k~~~~H~~l~~~s~-------------~~v~~~~~SPi-~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~l 420 (467)
T KOG1358|consen 356 EIVQPLRAKVAKFHAALSSNSG-------------FIVSGSPESPI-IHLQLERSYGSREKEEKLLEEIVDKCIAE-GVL 420 (467)
T ss_pred chhhhhhccccccchhhhcCCc-------------eEEecCcCCce-eeeeecccccchHHHHHHHHHHHHHHHhh-cce
Confidence 2455566666666666665332 22222 33333 23333331 1 2344455544 777
Q ss_pred eecCCcc---c--CCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 221 GREGKKF---R--AEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 221 ~~~g~~f---~--~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+.-.... . +-+..+||++.. ++++++.+.+.|+++-+
T Consensus 421 l~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 421 LTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred ehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 6543322 1 124679999966 99999999999988754
No 357
>PRK15029 arginine decarboxylase; Provisional
Probab=98.07 E-value=0.00048 Score=64.58 Aligned_cols=142 Identities=12% Similarity=0.106 Sum_probs=75.7
Q ss_pred ChhhhcccC--CCCce--------EEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-----cCCCCC---CCC--
Q 024997 24 EANLWGNAS--SDTHL--------VEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-----FWPHFA---PIP-- 78 (259)
Q Consensus 24 d~~~l~~~~--~~~~~--------~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-----~~~~~~---~~~-- 78 (259)
+++.+++.+ .+..+ ++++++|+. -|.++ .++|+++|+.+++|||+ |.+.+. .+.
T Consensus 291 ~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~ 369 (755)
T PRK15029 291 QPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGE 369 (755)
T ss_pred CHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCcccccccccccc
Confidence 367777776 23333 889999975 35554 48999999999999998 222222 120
Q ss_pred --CCCCC-eEEEeccccccCCCcceEE-EEEecCH--HH-HHHHHHhhhhh-cCCCCHHHHHHHHHHHHHHHhcCCcchH
Q 024997 79 --APADE-ELMIFTISKLTGHAGSRFG-WAVIKDE--AV-YQRMSAYISLN-TMGVSRECQLRAFKLLKVVLEDGGNNIF 150 (259)
Q Consensus 79 --~~~~~-~i~~~S~SK~~g~~G~R~G-~i~~~~~--~~-~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 150 (259)
...+- ++++.|..|+++ ++..| ++...+. .+ .++++...... +.++|-+..+ .+..-...+++ ..-
T Consensus 370 ~~~~~Gad~~vvqStHKtL~--alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmA-SLD~ar~~m~~---~~G 443 (755)
T PRK15029 370 PGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICA-SNDVAVSMMDG---NSG 443 (755)
T ss_pred ccccCCCceEEEEchhhccc--chhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHH-HHHHHHHHHhh---hhh
Confidence 10223 499999999984 34344 5666432 11 13455544433 3334433332 22222222211 012
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 024997 151 EFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
.+..+...++...+++.++++.
T Consensus 444 ~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 444 LSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 2234445555555666665543
No 358
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.07 E-value=0.00044 Score=56.75 Aligned_cols=178 Identities=12% Similarity=0.126 Sum_probs=105.7
Q ss_pred HhhcCCCcEEEeeccc--c---CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHH--hhhhhcCCC
Q 024997 54 AVLKGPYAKSIYDHAY--F---WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA--YISLNTMGV 126 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~---~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~--~~~~~~~~~ 126 (259)
+..+.+|-+.|.||+. | +.+++.+. ..+-+--+-++.|..| .|..++.++.. +++.+++.. .....+++.
T Consensus 237 ~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq-~y~fiPDIVtmgKpmG-NGhPVa~Vatt-keIA~Af~atgv~YFNTyGG 313 (452)
T KOG1403|consen 237 DAVRSAGGVCIADEVQVGFGRVGSHYWAFQ-TYNFIPDIVTMGKPMG-NGHPVAAVATT-KEIAQAFHATGVEYFNTYGG 313 (452)
T ss_pred HHHhcCCCeEEeehhhhcccccchhhhhhh-hhccccchheecccCC-CCCeeeEEecc-HHHHHHhccccceehhccCC
Confidence 6678899999999998 5 33444442 2222334778899998 99999999999 799999976 334556888
Q ss_pred CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC--CeeEEEecCC
Q 024997 127 SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS--PAYAWVKCER 204 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 204 (259)
+|.+=+++.+.++.. .++.+++..+++-+....+...++.- ..++.... |.|+-+++-.
T Consensus 314 nPVsCAv~laVm~v~----e~E~Lq~ha~~vG~~L~~lL~~~k~k---------------h~~IGDvRGvGLFiGIdLVk 374 (452)
T KOG1403|consen 314 NPVSCAVGLAVMRVC----EDENLQEHAQQVGEKLEVLLRRLKQK---------------HECIGDVRGVGLFIGIDLVK 374 (452)
T ss_pred CchhHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHHHHHhhh---------------ccceeccccceEEEeeeeec
Confidence 888888888888754 22334444444444444444443321 22333333 4454454421
Q ss_pred -C-----c----hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHHHHHHHh
Q 024997 205 -E-----E----DKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 205 -~-----~----~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l 256 (259)
. + .-.+.++-+.++|++.. =++..+-+.|-. ..++++.++.+..|.++|
T Consensus 375 D~~tRtP~tk~A~~~v~rlke~y~VLlsa---DGPh~NilKiKPPmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 375 DRKTRTPDTKEAHWVVNRLKELYRVLLSA---DGPHRNILKIKPPMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred ccccCCCcHHHHHHHHHHHHHhhhEEEec---CCCCCceeecCCCcccChhhHHHHHHHHHHHH
Confidence 1 1 23355566667788765 122234444432 125566666666666554
No 359
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.05 E-value=0.00022 Score=62.32 Aligned_cols=212 Identities=16% Similarity=0.134 Sum_probs=120.2
Q ss_pred ccChhhhcccCCC----CceEEEEcCCCCCChh-hH--------HHhhcCCCcEEEeecc------cc----CCCC--CC
Q 024997 22 EGEANLWGNASSD----THLVEFVTAPNNPDGQ-MN--------KAVLKGPYAKSIYDHA------YF----WPHF--AP 76 (259)
Q Consensus 22 ~~d~~~l~~~~~~----~~~~i~i~~p~NPtG~-~~--------~~la~~~~~~vi~De~------y~----~~~~--~~ 76 (259)
.+|++.|++.+++ +...+...--+|-.|. .+ .++|+++|+.++.|.+ || ++.. .+
T Consensus 166 ~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~s 245 (467)
T TIGR02617 166 NFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWS 245 (467)
T ss_pred CcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCC
Confidence 5678889998853 2222111112354443 44 3899999999999954 43 1111 11
Q ss_pred CCC-----CCCCeEEEeccccccCCC-cceEEEEEecCH---HHHHHHHHhhh-----hhcCCCCHHHHHHHHHHHHHHH
Q 024997 77 IPA-----PADEELMIFTISKLTGHA-GSRFGWAVIKDE---AVYQRMSAYIS-----LNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 77 ~~~-----~~~~~i~~~S~SK~~g~~-G~R~G~i~~~~~---~~~~~~~~~~~-----~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
+.. ...-+.+..|+||-+|.+ | |+++++++ ++.++++...- .+..+.+.-...+++..|.+.
T Consensus 246 i~eI~rE~~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~- 321 (467)
T TIGR02617 246 IEQITRETYKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG- 321 (467)
T ss_pred HHHHHHHhhccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-
Confidence 111 134467899999999877 6 78888876 44444444221 112345555555565556542
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----------chHHHHH
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----------EDKDCYG 212 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 212 (259)
-.++++..+.+ ..+++.+.|.+.+ +.+.. .||--+++|.... ...+..+
T Consensus 322 --~~~~yl~~ri~----qv~yl~~~L~~~G--------------vpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ 380 (467)
T TIGR02617 322 --MNLDWLAYRIN----QVQYLVNGLEEIG--------------VVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACE 380 (467)
T ss_pred --ccHHHHHHHHH----HHHHHHHHHHhCC--------------CcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHH
Confidence 12333333333 3344455555433 33334 5555555553321 3567777
Q ss_pred HHHHcCeeeec-CCcc-c----------CCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKIIGRE-GKKF-R----------AEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~~~~-g~~f-~----------~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
+-.+.||-..- |+.. + ++-..+|+++-+ +.+.++...+++..+.++
T Consensus 381 ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 381 LYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred HHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 77788885322 2211 1 113579999955 889999999999887653
No 360
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.98 E-value=3e-05 Score=66.53 Aligned_cols=126 Identities=15% Similarity=0.113 Sum_probs=80.3
Q ss_pred CCCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCC
Q 024997 33 SDTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGH 96 (259)
Q Consensus 33 ~~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~ 96 (259)
.++..+ +|..| +.-.|... .++|+++|+++|.||++ |+.....+. +..+ + +-+++|.++
T Consensus 175 ~~~iaa-vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~P-D--iv~~gK~l~- 249 (339)
T PF00202_consen 175 ADEIAA-VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDP-D--IVTFGKGLG- 249 (339)
T ss_dssp GGGEEE-EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSS-S--EEEEEGGGG-
T ss_pred CCcEEE-EEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccC-c--ccccccchh-
Confidence 345566 55555 32233333 38999999999999999 532222221 2222 3 345579997
Q ss_pred CcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc
Q 024997 97 AGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS 171 (259)
Q Consensus 97 ~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (259)
.|+.+|.+++. +++.+.+.......+++.+++...++.+.|+...+ ++ ..+++++.-.++.+.|+++
T Consensus 250 gG~p~sav~~~-~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~---~~----~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 250 GGLPISAVLGS-EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEE---ED----LLERVRELGERLREGLREL 316 (339)
T ss_dssp TTSSEEEEEEE-HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH---TT----HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccc-chhhccccccccccccccchHhhhhhhhHHHhhcc---HH----HHHHHHHHHHHHHHHHHHH
Confidence 78999999999 79998876655667788899999988888886522 12 2445555555555555544
No 361
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.98 E-value=0.001 Score=55.35 Aligned_cols=214 Identities=15% Similarity=0.084 Sum_probs=132.5
Q ss_pred ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCC---CCCCCeEEEeccccc
Q 024997 22 EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIP---APADEELMIFTISKL 93 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~---~~~~~~i~~~S~SK~ 93 (259)
.+.++++++.+++++.++++++.+.=||..+ .++|+++|++++.|=++- ...++ ...+.++-+++.-|.
T Consensus 153 ~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHs---aGavp~~Lh~~gaDfaigcsyKY 229 (407)
T COG3844 153 VIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHS---AGAVPVDLHAAGADFAIGCSYKY 229 (407)
T ss_pred eeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcc---cCCcceeecccCCCeeeeeecee
Confidence 4567789999999999999999999999998 389999999999998772 22222 345668889999999
Q ss_pred c-CCCcceEEEEEecCHHHHHHHHH-----------------------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 94 T-GHAGSRFGWAVIKDEAVYQRMSA-----------------------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 94 ~-g~~G~R~G~i~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
+ |.||.--|..+.+ +..+.... ..+.....++.+...+....|+-. .+--
T Consensus 230 LNgGPGapa~l~v~~--~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDif----a~~~ 303 (407)
T COG3844 230 LNGGPGAPAGLFVAP--RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIF----ADVD 303 (407)
T ss_pred ccCCCCCceeEEecc--ccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhh----hhcC
Confidence 8 4577655544433 43333211 011111222333333333333321 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-CccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNR-FSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
+.+.+++--...+.+++.++.... +.+....+ .-..+.|..+.+..+ ....+.+.|.++||..- |.
T Consensus 304 i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tP-------r~~~~rGsqvS~~hp--~~~~V~qaLi~rGVigD----~R 370 (407)
T COG3844 304 ITELRKKSLALTDYFIELVEARCEYYGLTLVTP-------RAHEERGSQVSLYHP--HGYQVMQALIDRGVIGD----FR 370 (407)
T ss_pred HHHHHHhhhHHHHHHHHHHHhccccCCcEEecc-------chhhhccceeeEecC--cHHHHHHHHHHcCcccc----cc
Confidence 666777777777888888776542 11111111 011234555555554 34555566667898542 22
Q ss_pred CCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
.++.+|+.++. +-.++=.+++.|.++++.
T Consensus 371 -~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 371 -EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred -CCCeeeecCccceechhHHHHHHHHHHHHHHh
Confidence 35899999976 667888888888888764
No 362
>PRK13578 ornithine decarboxylase; Provisional
Probab=97.94 E-value=0.00058 Score=63.51 Aligned_cols=69 Identities=16% Similarity=0.130 Sum_probs=43.1
Q ss_pred ceEEEEcCCCCCChhhH-----HHh-hcCCCcEEEeeccc-----cCCCCCCCC------CC-CCCeEEEeccccccCCC
Q 024997 36 HLVEFVTAPNNPDGQMN-----KAV-LKGPYAKSIYDHAY-----FWPHFAPIP------AP-ADEELMIFTISKLTGHA 97 (259)
Q Consensus 36 ~~~i~i~~p~NPtG~~~-----~~l-a~~~~~~vi~De~y-----~~~~~~~~~------~~-~~~~i~~~S~SK~~g~~ 97 (259)
.+++++++|+. -|.++ .++ ++..+ .|++|||+ |.+.+..++ +. .+-++++.|..|.++
T Consensus 283 ~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~-- 358 (720)
T PRK13578 283 FRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA-- 358 (720)
T ss_pred ceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--
Confidence 48889998864 45555 254 67788 99999998 223211121 12 234689999999984
Q ss_pred cce-EEEEEecC
Q 024997 98 GSR-FGWAVIKD 108 (259)
Q Consensus 98 G~R-~G~i~~~~ 108 (259)
++- -+++...+
T Consensus 359 alTQaS~LHvk~ 370 (720)
T PRK13578 359 GFSQTSQIHKKD 370 (720)
T ss_pred hhhhHhhhhcCC
Confidence 333 34666653
No 363
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.93 E-value=0.00051 Score=61.15 Aligned_cols=163 Identities=13% Similarity=0.040 Sum_probs=101.1
Q ss_pred cchhhhhhccCcc-----c--ccccChhhhcccCCCCceE--EEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc--
Q 024997 6 LYQEQTDYFESVD-----Y--KFEGEANLWGNASSDTHLV--EFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-- 69 (259)
Q Consensus 6 ~~~~~~~~~g~~~-----~--~~~~d~~~l~~~~~~~~~~--i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-- 69 (259)
.+.+.++..|... + .+.+|+++|++++.+.+.. |+-+.++-|||.+= +++|+++++++.+|.||
T Consensus 169 s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG 248 (460)
T COG0076 169 SFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGG 248 (460)
T ss_pred HHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccc
Confidence 4556666666654 2 4789999999999775554 78889999999974 59999999999999999
Q ss_pred c----CCCCCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCH-HHHHHHHHhhhhh--------cCCCCHHH-HHHH
Q 024997 70 F----WPHFAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDE-AVYQRMSAYISLN--------TMGVSREC-QLRA 134 (259)
Q Consensus 70 ~----~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~~~~~~~~~~--------~~~~~~~~-q~~~ 134 (259)
| -.....+ .+....+=+.-++.|.+. +=.-+||+...|+ ++.+.+.-...++ +...+.+. +.++
T Consensus 249 ~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~-aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~ 327 (460)
T COG0076 249 FLLPFLEPDGRWDFGLEGVDSITVDGHKYGL-APIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALA 327 (460)
T ss_pred eeecccCccchhhcCCCCceEEEECcccccC-CCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHH
Confidence 2 1111111 123334556889999974 3344899999986 4555443211111 11112222 2211
Q ss_pred -HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC
Q 024997 135 -FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR 173 (259)
Q Consensus 135 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 173 (259)
-..+... +.+-+.+..++..+..+.+.+.+++.+.
T Consensus 328 ~~~~l~~l----G~eGy~~l~~~~~~~a~~la~~l~~~~~ 363 (460)
T COG0076 328 LYANLRRL----GREGYRKLLDRTLELARYLAEELEKLGD 363 (460)
T ss_pred HHHHHHHh----CHhHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1112221 2334566667777888888888887764
No 364
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.89 E-value=0.00023 Score=60.92 Aligned_cols=136 Identities=13% Similarity=0.036 Sum_probs=94.0
Q ss_pred CcccchhhhhhccCccccc----ccChhhhcccCCCCceEEEEcCCCCC--Chhh----HHHhhcCCCcEEEeeccccC-
Q 024997 3 FYPLYQEQTDYFESVDYKF----EGEANLWGNASSDTHLVEFVTAPNNP--DGQM----NKAVLKGPYAKSIYDHAYFW- 71 (259)
Q Consensus 3 ~y~~~~~~~~~~g~~~~~~----~~d~~~l~~~~~~~~~~i~i~~p~NP--tG~~----~~~la~~~~~~vi~De~y~~- 71 (259)
+-++...+.+..|+..+.+ .-...+++.++++++++++-+.-+|= +|.+ +.++|+++|+++++|.+-=.
T Consensus 120 g~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~ 199 (395)
T COG1921 120 GAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGAL 199 (395)
T ss_pred CCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccc
Confidence 4455667777777765322 34466788889888776555554442 2222 24899999999999984400
Q ss_pred -CCCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 72 -PHFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 72 -~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
.....+. -..+.++++.|.-|.+| |-+-|.+++. +++++++++.......-+..+..++..+.|+.+
T Consensus 200 v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk-KelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y 269 (395)
T COG1921 200 VDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGK-KELIEKLQSHPLKRALRVDKETLAALEAALELY 269 (395)
T ss_pred cccccchhHHHhcCCCEEEEecchhcC--CCccceEech-HHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHH
Confidence 0011111 13456899999999997 6668999999 899999988766666667788888888888865
No 365
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.88 E-value=0.002 Score=54.46 Aligned_cols=213 Identities=12% Similarity=0.042 Sum_probs=126.4
Q ss_pred cChhhhcccCCC-CceEEEEcCCCCCChhhHH---HhhcCCCcEEEeeccccCC--CCCCCCC-CCCCeEEEeccccccC
Q 024997 23 GEANLWGNASSD-THLVEFVTAPNNPDGQMNK---AVLKGPYAKSIYDHAYFWP--HFAPIPA-PADEELMIFTISKLTG 95 (259)
Q Consensus 23 ~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~---~la~~~~~~vi~De~y~~~--~~~~~~~-~~~~~i~~~S~SK~~g 95 (259)
+|-|.|++.... ++++|+.-.-..|--.-++ ++|.+.|++++.|.++..+ ....+++ -.-.+|+..|..|++
T Consensus 176 IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsL- 254 (477)
T KOG2467|consen 176 IDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSL- 254 (477)
T ss_pred eehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccc-
Confidence 455778776643 7888555443445444443 8899999999999988311 0011111 122478899999997
Q ss_pred CCcceEEEEEecCH---------------HHHHHHHHhhhhhc-CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 024997 96 HAGSRFGWAVIKDE---------------AVYQRMSAYISLNT-MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKK 159 (259)
Q Consensus 96 ~~G~R~G~i~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (259)
.|=|-|.|... + ++-++++..--+.- .++..=.-.+.+-+|... ....+.+..+++.+
T Consensus 255 -RGPRg~mIFyR-kGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa----~tpefk~Yq~qV~~ 328 (477)
T KOG2467|consen 255 -RGPRGAMIFYR-KGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQA----MTPEFKEYQKQVLK 328 (477)
T ss_pred -cCCcceeEEEe-ccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhh----CCHHHHHHHHHHHH
Confidence 46666777654 2 22333322111111 223222223334455542 33456677888999
Q ss_pred HHHHHHHHHHhcCCCccccccccccccceeeCCCCCe-eEEEecCCC--chHHHHHHHHHcCeeee----cCCcccCCCC
Q 024997 160 RWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPA-YAWVKCERE--EDKDCYGILKAAKIIGR----EGKKFRAEAR 232 (259)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~ll~~~gi~~~----~g~~f~~~~~ 232 (259)
|.+.+.+.|.+++ .+......-. .+++++... +...+++.|+..+|.+. ||+.-...++
T Consensus 329 Nakala~~l~~~G--------------y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~Pg 394 (477)
T KOG2467|consen 329 NAKALASALISRG--------------YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPG 394 (477)
T ss_pred HHHHHHHHHHHcC--------------ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCC
Confidence 9999999998877 2222222222 445566544 78889999999899764 4433333478
Q ss_pred eEEEEe----ec--ChhhHHHHHHHHHHHh
Q 024997 233 FVRLSL----LK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 233 ~~Ris~----~~--~~~~~~~~~~~l~~~l 256 (259)
.+||.. ++ .++++++..+-|.+.+
T Consensus 395 GiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 395 GIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred ceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 899985 22 5677777777666554
No 366
>PLN02263 serine decarboxylase
Probab=97.78 E-value=0.0051 Score=54.69 Aligned_cols=217 Identities=11% Similarity=0.036 Sum_probs=125.1
Q ss_pred chhhhhhccCcc------cccccChhhhcccCCC---CceEEEEcCCCCCChhhH-----HHhhcCCCc-----EEEeec
Q 024997 7 YQEQTDYFESVD------YKFEGEANLWGNASSD---THLVEFVTAPNNPDGQMN-----KAVLKGPYA-----KSIYDH 67 (259)
Q Consensus 7 ~~~~~~~~g~~~------~~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~-----~~la~~~~~-----~vi~De 67 (259)
..++++++|... ..+++|.++|++.+.+ .+.+|+.+..+-++|.+= .++|+++|+ |+-+|.
T Consensus 191 v~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDA 270 (470)
T PLN02263 191 VFKAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDG 270 (470)
T ss_pred HHHHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEec
Confidence 445666666654 2468999999998843 356666777888999985 378888886 999999
Q ss_pred ccc---C---CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh-----cCCCCHHHHHHH--
Q 024997 68 AYF---W---PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-----TMGVSRECQLRA-- 134 (259)
Q Consensus 68 ~y~---~---~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~q~~~-- 134 (259)
+|. - .....+.....-.=+.-+..|.++ .-...|.+... .+..+.+.....++ +...+...+.++
T Consensus 271 A~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~-~P~~cgvll~R-~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~l 348 (470)
T PLN02263 271 ALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFL 348 (470)
T ss_pred cchhhHhhhcccccccCCCcCccEEEECCccccC-CCcCEEEEEEe-hhhHhhhccChHhhCCCCCCcCCCCCcHHHHHH
Confidence 992 1 111112111122335667789986 55678988888 45555443211111 122222222111
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGIL 214 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 214 (259)
-..++. .+.+-+.+..++..++.+.+.+.|++.+. .....|.... +.+..+ +.+. .
T Consensus 349 W~~L~~----~G~~G~~~~i~~~~~~A~~l~~~l~~~g~-------------~~~~~p~s~~-V~f~~p--~~~~----~ 404 (470)
T PLN02263 349 WYTLNR----KGYRGFQKEVQKCLRNAHYLKDRLREAGI-------------SAMLNELSST-VVFERP--KDEE----F 404 (470)
T ss_pred HHHHHH----hCHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------eEEeCCCceE-EEEecC--chHH----h
Confidence 112222 13344666677777888888888887642 1122344333 333322 1211 1
Q ss_pred HHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 215 KAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
..|..+.. .++.+++.+.. +.+.+++.++-|++..
T Consensus 405 -~~gW~L~~------~~~~~Hivvmphv~~~~id~fi~DL~~~~ 441 (470)
T PLN02263 405 -VRRWQLAC------QGNIAHVVVMPSVTIEKLDYFLKELVEKR 441 (470)
T ss_pred -hcceEEcc------CCCcEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 24665543 12568999876 6788888888887654
No 367
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.76 E-value=0.00011 Score=62.46 Aligned_cols=144 Identities=15% Similarity=0.164 Sum_probs=54.6
Q ss_pred hhhhcccCCCCceEEEEcCCCCC-----ChhhH----HHhhcCCCcEEEeeccc--------cC-CCCCCCC--CCCCCe
Q 024997 25 ANLWGNASSDTHLVEFVTAPNNP-----DGQMN----KAVLKGPYAKSIYDHAY--------FW-PHFAPIP--APADEE 84 (259)
Q Consensus 25 ~~~l~~~~~~~~~~i~i~~p~NP-----tG~~~----~~la~~~~~~vi~De~y--------~~-~~~~~~~--~~~~~~ 84 (259)
.++.+++++++|.+++-.+++|- |+.+- .++|+++|+++|+|-.- |+ +....+. -..+-+
T Consensus 126 ~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaD 205 (367)
T PF03841_consen 126 LSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGAD 205 (367)
T ss_dssp -----------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-S
T ss_pred cccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCC
Confidence 45688899999999999999885 33332 48999999999999543 21 1112222 234568
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcC-------CcchHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDG-------GNNIFEFGYNTM 157 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~-------~~~~~~~~~~~~ 157 (259)
++++|..|.+|.|. .|.+++. ++++++++.....-...+......+..+.++...+.+ ....+.+..+.+
T Consensus 206 lV~fSGdKlLGGPQ--aGiI~Gk-k~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L 282 (367)
T PF03841_consen 206 LVTFSGDKLLGGPQ--AGIIVGK-KELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEEL 282 (367)
T ss_dssp EEEEETTSSSSS-S---EEEEEE-HHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH------------------------
T ss_pred EEEEECCCcCCCCC--eEEEEeC-HHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccc
Confidence 99999999998555 7999999 8999999876655556678888787777777543211 112245556667
Q ss_pred HHHHHHHHHHHHhc
Q 024997 158 KKRWENLSKIISLS 171 (259)
Q Consensus 158 ~~~~~~~~~~l~~~ 171 (259)
+++.+.+...|+..
T Consensus 283 ~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 283 RARAERLAAQLKAA 296 (367)
T ss_dssp --------------
T ss_pred cccccccccccccc
Confidence 77777777776653
No 368
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=97.72 E-value=0.0002 Score=62.53 Aligned_cols=137 Identities=12% Similarity=0.048 Sum_probs=71.3
Q ss_pred hhhcccC--CCCce---EEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-----cCC---CCCCCC-C--CCCCe
Q 024997 26 NLWGNAS--SDTHL---VEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-----FWP---HFAPIP-A--PADEE 84 (259)
Q Consensus 26 ~~l~~~~--~~~~~---~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-----~~~---~~~~~~-~--~~~~~ 84 (259)
+.+++.+ .+..+ ++++++|+. -|.++ .++|+++|+.|++|||+ |.+ +...+. + ....+
T Consensus 154 ~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~ 232 (417)
T PF01276_consen 154 EDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGI 232 (417)
T ss_dssp HHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEE
T ss_pred HHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCccccccce
Confidence 6777777 34434 489999975 35554 48999999999999998 211 011111 1 22347
Q ss_pred EEEeccccccCCCcce-EEEEEecCHH--HHHHHHHhhhh-hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSR-FGWAVIKDEA--VYQRMSAYISL-NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R-~G~i~~~~~~--~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+++.|..|+++ ++. -+++...+.. -.+++++.... .+.++|-+..+. +..-...+ ....-.+..++..++
T Consensus 233 ~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmAS-lD~a~~~m---~~~~G~~l~~~~i~~ 306 (417)
T PF01276_consen 233 IVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMAS-LDVARAQM---EEEEGRELLEEAIEL 306 (417)
T ss_dssp EEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHH-HHHHHHHH---SHHHHHHHHHHHHHH
T ss_pred eeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHH-HHHHHHHH---hhhhhHHHHHHHHHH
Confidence 99999999985 222 4577766422 13455554432 245555544432 22222111 011223344455555
Q ss_pred HHHHHHHHH
Q 024997 161 WENLSKIIS 169 (259)
Q Consensus 161 ~~~~~~~l~ 169 (259)
.+.+++.++
T Consensus 307 a~~~R~~i~ 315 (417)
T PF01276_consen 307 AEEFRKKIN 315 (417)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556666663
No 369
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0018 Score=54.46 Aligned_cols=191 Identities=15% Similarity=0.202 Sum_probs=106.2
Q ss_pred CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--------cCC-CCCCCCCCCCCeEEEeccccccC
Q 024997 35 THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--------FWP-HFAPIPAPADEELMIFTISKLTG 95 (259)
Q Consensus 35 ~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--------~~~-~~~~~~~~~~~~i~~~S~SK~~g 95 (259)
.+.+-+|..| +.--|.-. .++++++|+.+|+||++ ||. ....+....| +-||||-|-
T Consensus 270 ~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD----~vTFSKK~q 345 (484)
T KOG1405|consen 270 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD----VVTFSKKFQ 345 (484)
T ss_pred CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc----ceehhhhhh
Confidence 3555466666 44444333 38999999999999998 222 2334433333 678999994
Q ss_pred CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 024997 96 HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFS 175 (259)
Q Consensus 96 ~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 175 (259)
+| ||..-. +++.. ..++...+|...+.-...+.++++.+. .++. .+..+.--+.+...|.++.
T Consensus 346 -~g---Gffh~~--~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~---~~~L----l~n~~~vG~~l~~gL~~Lq--- 408 (484)
T KOG1405|consen 346 -TG---GFFHDE--EFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIK---REDL----LNNVAHVGKALLKGLLELQ--- 408 (484)
T ss_pred -cC---ccccCc--ccCCC-chHHHhhhhcCChHHHHHHHHHHHHHh---HHHH----HHHHHHHHHHHHHHHHHHH---
Confidence 66 766633 55442 233444456655544444445555431 2233 3333333344444444332
Q ss_pred cccccccccccceeeCCCCCeeEEEecCCCc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHHHH
Q 024997 176 LQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLHRL 252 (259)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~~l 252 (259)
...+. .+...+. .|.|+..+++..+ .+.+...++.+|+.+-- ++ ...+|+-. ...+...+-.++++
T Consensus 409 -~~~p~----~~~~~RG-rGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG---Cg--~~siRfRPsLvf~~~Ha~i~l~~~ 477 (484)
T KOG1405|consen 409 -AKYPG----KINNLRG-RGTFIAWDCPSGSIRDKLILIARLNGVNLGG---CG--DKSIRFRPSLVFRKHHADIFLDIF 477 (484)
T ss_pred -HhCch----hhhcccc-cceEEEEeCCChHHHHHHHHHHHHcCceecc---cc--cceeeeccceeehhhhHHHHHHHH
Confidence 11111 0222333 5778888888653 46666777778886532 33 24455554 34777777888888
Q ss_pred HHHhh
Q 024997 253 DELIS 257 (259)
Q Consensus 253 ~~~l~ 257 (259)
.+++.
T Consensus 478 ~k~l~ 482 (484)
T KOG1405|consen 478 DKILA 482 (484)
T ss_pred HHHhc
Confidence 88765
No 370
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.52 E-value=0.01 Score=57.61 Aligned_cols=183 Identities=14% Similarity=0.104 Sum_probs=101.7
Q ss_pred CCChhhHH-----HhhcCCCcEEEeeccccCCCCCCC--CCCCCCeEEEeccccccC---CCcceEEEEEecCHHHHHHH
Q 024997 46 NPDGQMNK-----AVLKGPYAKSIYDHAYFWPHFAPI--PAPADEELMIFTISKLTG---HAGSRFGWAVIKDEAVYQRM 115 (259)
Q Consensus 46 NPtG~~~~-----~la~~~~~~vi~De~y~~~~~~~~--~~~~~~~i~~~S~SK~~g---~~G~R~G~i~~~~~~~~~~~ 115 (259)
|-+|.+.+ ++|+++|+++++ .+.- .....+ ++..+.+|+++|.-|..+ .-|=+.|++++. +++...+
T Consensus 244 ~~~G~v~dv~~I~~~ah~~GaL~iV-aad~-lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr-~~~~r~~ 320 (993)
T PLN02414 244 ATDGEVLDYAEFVKNAHANGVKVVM-ATDL-LALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATS-QEYKRLM 320 (993)
T ss_pred CCCeEEcCHHHHHHHHHHcCCEEEE-EECH-HHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEEC-HHHHhhC
Confidence 45898873 889999999999 4431 011112 234466888999888871 123348999998 5765544
Q ss_pred HH-hhh---------h-------------hcCCCCHH----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 116 SA-YIS---------L-------------NTMGVSRE----CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 116 ~~-~~~---------~-------------~~~~~~~~----~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
-. ... . ...+.+.+ ...++..++-... ....=+.+..++..++..++.+.|
T Consensus 321 PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~--~g~~Gl~~Ia~ri~~la~~l~~~L 398 (993)
T PLN02414 321 PGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY--HGPEGLKTIAQRVHGLAGVFAAGL 398 (993)
T ss_pred CCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHH--hccccHHHHHHHHHHHHHHHHHHH
Confidence 21 000 0 01222333 1222222111000 112224555677777888888888
Q ss_pred HhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHH
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFD 246 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~ 246 (259)
+..+ +.+. .++..+ -+.++++ +.+.+.+.|.++||.++.. + .+.+|+|+.. ++++|+
T Consensus 399 ~~~G-~~~~------------~~~~f~-~vt~~~~--~~~~v~~~L~~~gI~l~~~---~--~~~lrvs~~e~~T~edId 457 (993)
T PLN02414 399 KKLG-FQVQ------------SLPFFD-TVKVKCS--DADAIADAAAKVGINLRVV---D--ANTVTVSFDETTTLEDVD 457 (993)
T ss_pred hhcC-CccC------------CCCCcC-eEEEecC--CHHHHHHHHHHCCCeeEEe---c--CCeEEEEeeccCCHHHHH
Confidence 7643 2211 011112 2233343 3355666667889977642 1 3679999854 889999
Q ss_pred HHHHHHHH
Q 024997 247 LLLHRLDE 254 (259)
Q Consensus 247 ~~~~~l~~ 254 (259)
.+++.|..
T Consensus 458 ~L~~~l~~ 465 (993)
T PLN02414 458 KLFKVFAG 465 (993)
T ss_pred HHHHHHcc
Confidence 99998863
No 371
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.52 E-value=0.0072 Score=51.98 Aligned_cols=219 Identities=10% Similarity=0.019 Sum_probs=111.4
Q ss_pred ccChhhhcccC---CCCceEEEEcCCCCCChhhH------HHhhcCCCcEEEeeccc-cCCC--CCCCC---CCCCCeEE
Q 024997 22 EGEANLWGNAS---SDTHLVEFVTAPNNPDGQMN------KAVLKGPYAKSIYDHAY-FWPH--FAPIP---APADEELM 86 (259)
Q Consensus 22 ~~d~~~l~~~~---~~~~~~i~i~~p~NPtG~~~------~~la~~~~~~vi~De~y-~~~~--~~~~~---~~~~~~i~ 86 (259)
..|.+.+++.+ .+...+.++++++--.|... +++|+++|+..|+..|| .... ...+. ....-.++
T Consensus 138 ~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~ 217 (389)
T PF05889_consen 138 ITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAF 217 (389)
T ss_dssp EEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEE
T ss_pred eccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCccee
Confidence 34455566655 34556667776653223322 59999999999999999 1000 00000 11233678
Q ss_pred EeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSK 166 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (259)
+.|+-|-| +-++--+.+.++++..++.+...........+...-..-+..|... + ....+.++++.+....+++.+
T Consensus 218 vqS~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~--g-~~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 218 VQSTDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCT--G-YGALLKERKASFPYLKERLKK 293 (389)
T ss_dssp EEEHHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhh--H-HHHHHHHHHHHHHHHHHHHHH
Confidence 89999988 3333346677777788888876443322222222222222222210 0 122233333333333333333
Q ss_pred HHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC------chHHHHHHHHHcCee----eecCCcccC------C
Q 024997 167 IISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------EDKDCYGILKAAKII----GREGKKFRA------E 230 (259)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~----~~~g~~f~~------~ 230 (259)
.-++.+. .+. ..|.....+.+.++.. +.-++..+|...||. +.++..+.. +
T Consensus 294 ~aee~~e----~ll---------~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp 360 (389)
T PF05889_consen 294 WAEEVGE----RLL---------ETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYP 360 (389)
T ss_dssp HHHHTTE----EBS---------SSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--S
T ss_pred HHHHhhh----hhc---------CCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCc
Confidence 3333331 111 1344455555555533 235677777788885 333322211 2
Q ss_pred CCeEEEE--eecChhhHHHHHHHHHHHhh
Q 024997 231 ARFVRLS--LLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 231 ~~~~Ris--~~~~~~~~~~~~~~l~~~l~ 257 (259)
-.++-++ ++-+.++++..+++|+++++
T Consensus 361 ~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 361 CPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 4677774 34499999999999999875
No 372
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=97.46 E-value=0.016 Score=54.11 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=47.0
Q ss_pred hhhhcccCC--C---CceEEEEcCCCCCChhhH--HHhhcCCCcEE-Eeeccc-----cCCCCC---CCCC---CCCCeE
Q 024997 25 ANLWGNASS--D---THLVEFVTAPNNPDGQMN--KAVLKGPYAKS-IYDHAY-----FWPHFA---PIPA---PADEEL 85 (259)
Q Consensus 25 ~~~l~~~~~--~---~~~~i~i~~p~NPtG~~~--~~la~~~~~~v-i~De~y-----~~~~~~---~~~~---~~~~~i 85 (259)
.+.+++.+. + +++.+++++| +=-|.++ .++++..|+.+ ++|||+ |.+.+. .+.. ....++
T Consensus 282 ~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~ 360 (713)
T PRK15399 282 RDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF 360 (713)
T ss_pred HHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHhCCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeee
Confidence 366777762 2 2367899998 5567777 34444446766 699998 222121 1211 122355
Q ss_pred EEeccccccCCCcce-EEEEEec
Q 024997 86 MIFTISKLTGHAGSR-FGWAVIK 107 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R-~G~i~~~ 107 (259)
.+.|.+|.++ ++. -+++...
T Consensus 361 ~tQStHKtL~--alTQaS~iHvk 381 (713)
T PRK15399 361 ETQSTHKMLA--AFSQASLIHIK 381 (713)
T ss_pred eeeehhcccc--ccchheeeeec
Confidence 6999999984 333 3466664
No 373
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.44 E-value=0.02 Score=55.08 Aligned_cols=200 Identities=12% Similarity=0.055 Sum_probs=103.6
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccC--
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTG-- 95 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g-- 95 (259)
+|.++|++.+ ++..+++.+|+ -+|.+. .+++++.|++++++--...-....-++..+-+|++++- |.||
T Consensus 184 ~~~~~l~~~~--~~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~-q~fg~p 259 (939)
T TIGR00461 184 VDCSDIKKAV--DVFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSS-QRFGVP 259 (939)
T ss_pred EcHHHHhhcC--CEEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCC-CccCCC
Confidence 3555566555 56676777775 567775 38889999999985411100000111233345554432 3222
Q ss_pred ----CCcceEEEEEecCHHHHHHHH----------------------------HhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 96 ----HAGSRFGWAVIKDEAVYQRMS----------------------------AYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 96 ----~~G~R~G~i~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
.|+ .|++.+. +++..++- +-+.....|.+...-+..+.++-..
T Consensus 260 ~g~GGP~--aG~~a~~-~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~-- 334 (939)
T TIGR00461 260 MGYGGPH--AAFFAVK-DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVY-- 334 (939)
T ss_pred CCCCCCc--eeeeeec-HhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHH--
Confidence 244 6777776 45555431 0111111222221111111222111
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCee--EEEecCCCchHHHHHHHHHcCeee
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAY--AWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
.+..-+.+.-++...+...+.+.|++.+ + +...+ .+| +.++++..+.+.+.+.+.++||.+
T Consensus 335 -~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~-------------~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~~gi~l 397 (939)
T TIGR00461 335 -HGPKGLKNIARRIHSLTSILANGLENDP-H-------------ELINK--TWFDTLTVKVGNGISSELLKAAEEFNINL 397 (939)
T ss_pred -HCHHHHHHHHHHHHHHHHHHHHHHHhCC-C-------------cccCC--CccceEEEEeCCCCHHHHHHHHHHCCCee
Confidence 1333355555666667777777787643 2 21122 222 234443223455556666789997
Q ss_pred ecCCcccCCCCeEEEEeec--ChhhHHHHHHHHH
Q 024997 222 REGKKFRAEARFVRLSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~ 253 (259)
+. ...+.+++|+.- +.++++.+++.+.
T Consensus 398 ~~-----~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 398 RA-----VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ee-----cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 65 223689999954 8899999998884
No 374
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.31 E-value=0.026 Score=49.33 Aligned_cols=195 Identities=13% Similarity=0.160 Sum_probs=108.1
Q ss_pred cccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcC-CCcEEEeeccc--c-CC-CCCCCC--CCC-CCeE
Q 024997 19 YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKG-PYAKSIYDHAY--F-WP-HFAPIP--APA-DEEL 85 (259)
Q Consensus 19 ~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~-~~~~vi~De~y--~-~~-~~~~~~--~~~-~~~i 85 (259)
..|.+|+..+.+.+++++..++.+-|+-|+|.+= .+++.+ +++.+-+|.+- | -| ...... +-. +.+-
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 3578899999999999999999999999999986 266666 99999999875 3 22 111110 111 1122
Q ss_pred EE-eccccc-cCCCcceEEEEEecCHHHHHH-H-------HHhhhhhcC-----CCCHHHHHHHHHHHHHHHhcCCcchH
Q 024997 86 MI-FTISKL-TGHAGSRFGWAVIKDEAVYQR-M-------SAYISLNTM-----GVSRECQLRAFKLLKVVLEDGGNNIF 150 (259)
Q Consensus 86 ~~-~S~SK~-~g~~G~R~G~i~~~~~~~~~~-~-------~~~~~~~~~-----~~~~~~q~~~~~~l~~~~~~~~~~~~ 150 (259)
.+ -+..|. |..+| +||++-.++++... + -......+. +.....|++. ++.- +.+-+
T Consensus 282 Sisa~~HKYGl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~--~~~l-----G~eGY 352 (491)
T KOG1383|consen 282 SISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAA--LMSL-----GEEGY 352 (491)
T ss_pred eEeeccceeeeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHH--HHHh-----hHHHH
Confidence 22 233344 34466 78888665544332 1 111111122 2223334433 2221 22234
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCC
Q 024997 151 EFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAE 230 (259)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~ 230 (259)
.+..+...+..+.+.+.++.+.++.+ ..++.-.++..+-...+.-.+..+|++.|..+ |...|..
T Consensus 353 ~~~~~~ive~~~~l~egie~i~~i~i-------------~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~l-nalq~P~- 417 (491)
T KOG1383|consen 353 RENTQNIVETARKLREGIENIKGIKI-------------VGKPLVSFILFGSNDVNIFELSDLLRKKGWIL-NALQFPA- 417 (491)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccee-------------cCCCcEEEEEccCCccchhhhhHHHHhcCcCc-cccCCCC-
Confidence 44556677788888888887665332 22222222233333334556777788888866 4444443
Q ss_pred CCeEEEEee
Q 024997 231 ARFVRLSLL 239 (259)
Q Consensus 231 ~~~~Ris~~ 239 (259)
.+-|++.
T Consensus 418 --a~Hi~vt 424 (491)
T KOG1383|consen 418 --AIHICVT 424 (491)
T ss_pred --ceEEEEE
Confidence 3444443
No 375
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.30 E-value=0.018 Score=51.90 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=56.6
Q ss_pred ccChhhhcccC--CCCc-eEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc--cCCCCCCCC---CCCCCeEEEe
Q 024997 22 EGEANLWGNAS--SDTH-LVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY--FWPHFAPIP---APADEELMIF 88 (259)
Q Consensus 22 ~~d~~~l~~~~--~~~~-~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y--~~~~~~~~~---~~~~~~i~~~ 88 (259)
+++.+.+++.+ .+.. ++++++||+. -|.++ .++++.+++|+.+|++. +.......+ .....++.+.
T Consensus 150 gI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tq 228 (557)
T COG1982 150 GIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQ 228 (557)
T ss_pred CCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEe
Confidence 67788888876 3455 8889988864 34444 28888999999999987 211111111 2356799999
Q ss_pred ccccccCCCcceEEEEEecC
Q 024997 89 TISKLTGHAGSRFGWAVIKD 108 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~ 108 (259)
|..|.++ +.....++...+
T Consensus 229 S~HK~l~-alSQaS~iHv~~ 247 (557)
T COG1982 229 STHKLLA-ALSQASMIHVKD 247 (557)
T ss_pred chhhhhh-hhhhhHHHhhCC
Confidence 9999986 433344565553
No 376
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.24 E-value=0.02 Score=53.52 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=44.3
Q ss_pred ChhhhcccC--CCCce---EEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-----cCCCC---CCCC-CC--CC
Q 024997 24 EANLWGNAS--SDTHL---VEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-----FWPHF---APIP-AP--AD 82 (259)
Q Consensus 24 d~~~l~~~~--~~~~~---~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-----~~~~~---~~~~-~~--~~ 82 (259)
+.+.+++.+ .++.+ .+++++| +=-|.++ .++|+.++ |++|||+ |.+.+ ..+. +. .+
T Consensus 281 ~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~ 357 (714)
T PRK15400 281 QHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGK 357 (714)
T ss_pred CHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCC
Confidence 367777777 23333 6799988 4467766 37777777 6899998 22222 1121 12 24
Q ss_pred CeEEEeccccccC
Q 024997 83 EELMIFTISKLTG 95 (259)
Q Consensus 83 ~~i~~~S~SK~~g 95 (259)
.++++.|..|.++
T Consensus 358 ~i~vtQStHKtL~ 370 (714)
T PRK15400 358 VIYETQSTHKLLA 370 (714)
T ss_pred ceEEEEchhhccc
Confidence 4689999999984
No 377
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.18 E-value=0.036 Score=47.06 Aligned_cols=175 Identities=15% Similarity=0.076 Sum_probs=110.3
Q ss_pred cEEEeeccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHh-------------hhhhcCCC
Q 024997 61 AKSIYDHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY-------------ISLNTMGV 126 (259)
Q Consensus 61 ~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~-------------~~~~~~~~ 126 (259)
.++|+|-.- ...+.+ +-.+-.++..+.=|-+|..| ++.++.. ++++++...+ ...+..-+
T Consensus 171 ~~~v~D~SS---~ilsr~iDvsk~dviyagaQKnlGpaG--ltvvIvr-~~~l~r~~~~~~P~if~y~~~~~~~s~yNTP 244 (365)
T COG1932 171 GLLVADASS---AILSRPIDVSKYDVIYAGAQKNLGPAG--LTVVIVR-PDLLERAESYTLPSIFDYLTHADNGSMYNTP 244 (365)
T ss_pred ceEEEeccc---HHhcCCCChhHcceEEEehhhccCccc--eEEEEEc-HHHHhcccccCCchHhhchhhhccCCccCCc
Confidence 778888633 122222 33345777888999999999 8999988 6888877553 11122335
Q ss_pred CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc
Q 024997 127 SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE 206 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (259)
+.+.-+.....++..++. .=++...++-+++...+.+.+++.+.+.-. +.. ...+-+.+.+++.+.+
T Consensus 245 ptfa~y~~~lv~~Wlk~~---GGl~~~~~rn~~ka~~LY~~id~s~fy~~~---------v~~-~~RS~mnV~f~~~~~~ 311 (365)
T COG1932 245 PTFAWYLLGLVFKWLKSQ---GGLEALEARNQAKAQLLYDWIDKSDFYRNL---------VAK-ANRSRMNVTFTLVDAE 311 (365)
T ss_pred HHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHhCCccccc---------cch-hhccceeEEEEcCcHH
Confidence 556666666666654322 234556777788888889998876543211 111 3455566777766442
Q ss_pred -hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 207 -DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 207 -~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.+.+...++++|+...-|.. .. +.+|+|+.. +.++++.+++-++.+.+
T Consensus 312 ld~~fv~eae~~gl~~lkGhr--~v-gGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 312 LDKGFVAEAEAAGLIYLKGHR--SV-GGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred HHHHHHHHHHHcCCceecccc--CC-CceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 23444455567877777732 22 449999865 88999999888887754
No 378
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=97.05 E-value=9.6e-05 Score=61.84 Aligned_cols=97 Identities=10% Similarity=-0.052 Sum_probs=63.0
Q ss_pred cccChhhhcccCC------CCceEEEEcCCCCCC-hhhH--------HHhhcCCCcEEEeeccccCCC----CCCCCC-C
Q 024997 21 FEGEANLWGNASS------DTHLVEFVTAPNNPD-GQMN--------KAVLKGPYAKSIYDHAYFWPH----FAPIPA-P 80 (259)
Q Consensus 21 ~~~d~~~l~~~~~------~~~~~i~i~~p~NPt-G~~~--------~~la~~~~~~vi~De~y~~~~----~~~~~~-~ 80 (259)
-.+++++|++.+. +.+++|.+++|+|-. |.++ .++|+++|+.+..|.+=++.. ...+.. .
T Consensus 104 G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~ 183 (290)
T PF01212_consen 104 GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA 183 (290)
T ss_dssp TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH
T ss_pred CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh
Confidence 3588888998872 468999999999986 5555 289999999999998753110 001111 2
Q ss_pred CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh
Q 024997 81 ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS 120 (259)
Q Consensus 81 ~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~ 120 (259)
..-+.+..|+||.+|.++ -+.++++ ++++++......
T Consensus 184 ~~~D~v~~~~tK~~g~~~--Gavl~~~-~~~i~~~~~~~k 220 (290)
T PF01212_consen 184 AGADSVSFGGTKNGGAPG--GAVLAGN-KEFIAKARRQRK 220 (290)
T ss_dssp TTSSEEEEETTSTT-SSS--EEEEEES-HHHHHHHHHHHH
T ss_pred hhCCEEEEEEEccccccc--ceEEEec-hHHHHHHHHHHH
Confidence 345788899999988765 2455556 787776655443
No 379
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.97 E-value=0.051 Score=46.14 Aligned_cols=212 Identities=17% Similarity=0.160 Sum_probs=118.2
Q ss_pred ccChhhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeec------ccc----CCC--CCC
Q 024997 22 EGEANLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDH------AYF----WPH--FAP 76 (259)
Q Consensus 22 ~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De------~y~----~~~--~~~ 76 (259)
.+|.+.|++.+. ++...|+++--+|-.|... .++|++|++.++.|. +|| ++. ..+
T Consensus 168 d~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~s 247 (471)
T COG3033 168 NFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWS 247 (471)
T ss_pred ccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCccccccc
Confidence 466778888873 3344544444455544433 289999999999995 454 111 122
Q ss_pred CCC-----CCCCeEEEecccccc-CCCcceEEEEEecCHH---HHHHHHHhhh-----hhcCCCCHHHHHHHHHHHHHHH
Q 024997 77 IPA-----PADEELMIFTISKLT-GHAGSRFGWAVIKDEA---VYQRMSAYIS-----LNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 77 ~~~-----~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~---~~~~~~~~~~-----~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
+.+ ..-.+-...|.-|-- ---| |+++..|+. +-..++...- ....+.+.=...+.+..|.+
T Consensus 248 I~~IarEm~sYaD~~~mS~KKD~lvnmG---Gfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e-- 322 (471)
T COG3033 248 IEEIAREMYSYADGCTMSAKKDGLVNMG---GFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLRE-- 322 (471)
T ss_pred HHHHHHHHHhhhhhheeeccccceeccc---cEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHH--
Confidence 220 011122344555552 1245 788888753 4444443221 11223333333444444543
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC----------chHHHHH
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE----------EDKDCYG 212 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 212 (259)
+-..+|+..+.+ ..+++.+.|++.+ ++...|.||=-++++.... ...+..+
T Consensus 323 -~~~~~yl~~Rv~----Qv~YL~~~l~~~G--------------Vpi~~paGGHavfvda~~~lphip~eqFpaqala~e 383 (471)
T COG3033 323 -GVNFDYLAHRVA----QVQYLADGLEEAG--------------VPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACE 383 (471)
T ss_pred -hcCcHHHHHHHH----HHHHHHHHHHhcC--------------CeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHH
Confidence 123344433333 3345556666554 5556777777777775432 3467778
Q ss_pred HHHHcCeeeecCCcccC------------CCCeEEEEeec---ChhhHHHHHHHHHHHhh
Q 024997 213 ILKAAKIIGREGKKFRA------------EARFVRLSLLK---SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~------------~~~~~Ris~~~---~~~~~~~~~~~l~~~l~ 257 (259)
+.++.||-..-.-.|.. +...+|+++-+ +.+.++..++.++++++
T Consensus 384 ly~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 384 LYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred HHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh
Confidence 88888997655333321 12469999954 78889988888888765
No 380
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=96.44 E-value=0.0086 Score=50.88 Aligned_cols=92 Identities=17% Similarity=0.245 Sum_probs=58.6
Q ss_pred ccChhhhcccCCCCceEEEEcCC----CCCChhhH--H---Hhhc--CCCcEEEeeccc--c-CCCCCCCCCCCCCeEEE
Q 024997 22 EGEANLWGNASSDTHLVEFVTAP----NNPDGQMN--K---AVLK--GPYAKSIYDHAY--F-WPHFAPIPAPADEELMI 87 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p----~NPtG~~~--~---~la~--~~~~~vi~De~y--~-~~~~~~~~~~~~~~i~~ 87 (259)
.+|.+.+++.+++++++++|.-- .-|+=.+- . +..+ ..++++++|++| | +... +..-.-+++.
T Consensus 141 ~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E---P~~vGADl~a 217 (403)
T PF06838_consen 141 TIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE---PTEVGADLMA 217 (403)
T ss_dssp SB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----GGGGT-SEEE
T ss_pred CcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC---ccccchhhee
Confidence 78888999999999999776542 12433332 1 3333 478999999999 5 2111 1122458999
Q ss_pred eccccccC----CCcceEEEEEecCHHHHHHHHHhhh
Q 024997 88 FTISKLTG----HAGSRFGWAVIKDEAVYQRMSAYIS 120 (259)
Q Consensus 88 ~S~SK~~g----~~G~R~G~i~~~~~~~~~~~~~~~~ 120 (259)
||+-|-.| .+| |||++. +++++.......
T Consensus 218 GSLIKNpGGgiAptG---GYIaGr-~~lVe~~a~RLT 250 (403)
T PF06838_consen 218 GSLIKNPGGGIAPTG---GYIAGR-KDLVERAAYRLT 250 (403)
T ss_dssp EETTSGGGTTT-SS----EEEEES-HHHHHHHHHHHS
T ss_pred ccceeCCCCCccCcC---CEEech-HHHHHHHHhhhc
Confidence 99999975 366 999999 899998876543
No 381
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=96.39 E-value=0.035 Score=48.37 Aligned_cols=161 Identities=13% Similarity=0.057 Sum_probs=91.7
Q ss_pred chhhhhhccCcc------cccccChhhhcccCC----C-C-ceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 7 YQEQTDYFESVD------YKFEGEANLWGNASS----D-T-HLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 7 ~~~~~~~~g~~~------~~~~~d~~~l~~~~~----~-~-~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
..+.+..+|..+ ..+.+|.++|++.+. . . +.+|+.+..+-.||.+= .++|+++|+|+-+|.+|
T Consensus 154 ~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~ 233 (373)
T PF00282_consen 154 IEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAY 233 (373)
T ss_dssp HHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETT
T ss_pred HHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccc
Confidence 345556666544 236788888988772 2 2 33566666788899885 48999999999999999
Q ss_pred c-----CCCCCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHH----Hhhh-------------hhcCCC
Q 024997 70 F-----WPHFAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMS----AYIS-------------LNTMGV 126 (259)
Q Consensus 70 ~-----~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~----~~~~-------------~~~~~~ 126 (259)
- .+..... .+...-+=+.-+++|.++ .-...|++...++....... .+.. ..+...
T Consensus 234 gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~ 312 (373)
T PF00282_consen 234 GGSALLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQG 312 (373)
T ss_dssp GGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSS
T ss_pred cccccccccccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccc
Confidence 2 1222221 122333445778899997 44678999888654443221 1111 012233
Q ss_pred CHHHHHHHHHH--HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC
Q 024997 127 SRECQLRAFKL--LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR 173 (259)
Q Consensus 127 ~~~~q~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 173 (259)
+. ...++..+ ++.. +.+-+.+..++..+..+.+.+.+++.+.
T Consensus 313 SR-~~~alk~w~~l~~~----G~~G~~~~i~~~~~~a~~l~~~l~~~~~ 356 (373)
T PF00282_consen 313 SR-RFRALKLWATLKSL----GREGYRERIRRCIELARYLADRLRKDPR 356 (373)
T ss_dssp SG-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred cc-cchHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33 11211111 1211 2334667777888888889999988775
No 382
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=96.39 E-value=0.056 Score=47.57 Aligned_cols=192 Identities=13% Similarity=0.119 Sum_probs=87.1
Q ss_pred CCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCCCCCC--CCCCCCeEEEeccccccCC----CcceE
Q 024997 33 SDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFAPI--PAPADEELMIFTISKLTGH----AGSRF 101 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~~~--~~~~~~~i~~~S~SK~~g~----~G~R~ 101 (259)
++++..+++.+||. .|.+- .++++++|+.+++ .+-. .....+ |+..+-+|++++ +|.||. -|=-.
T Consensus 195 ~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~-~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~ 270 (429)
T PF02347_consen 195 DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADP-NALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGA 270 (429)
T ss_dssp STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGC-CGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--
T ss_pred ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCH-HHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCe
Confidence 56889999999984 44443 5899999998887 4331 011111 133445677777 777753 22237
Q ss_pred EEEEecCHHHHHHHH----------------------------HhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHH
Q 024997 102 GWAVIKDEAVYQRMS----------------------------AYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFG 153 (259)
Q Consensus 102 G~i~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 153 (259)
|++.+. +++..++- +-+.....|.+....+..+.++-.. .+.+=+.+.
T Consensus 271 G~~a~~-~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~---~G~~GL~~i 346 (429)
T PF02347_consen 271 GFFAVR-EDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAY---LGPEGLREI 346 (429)
T ss_dssp EEEEE--GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHH---HHHHHHHHH
T ss_pred eeEEEh-hhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHH---hCHHHHHHH
Confidence 888888 46655541 1111223444443322222222221 133345666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCee--EEEecCCCchHHHHHHHHHcCeeeecCCcccCCC
Q 024997 154 YNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAY--AWVKCEREEDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
-+..-.+..++.+.|+++.... .....+| +....+ + ....+++ +.++.--- .......
T Consensus 347 A~~~~~~A~yl~~~L~~~~~~~---------------~~~~~f~e~v~~~~~--~-~~~~~l~-~~~~~~gl-~~~~~~~ 406 (429)
T PF02347_consen 347 AERIHLNAHYLAERLKKIYGLP---------------FDNPFFFEFVVVFSK--D-KEVEELL-KRGIEGGL-NLRYPDD 406 (429)
T ss_dssp HHHHHHHHHHHHHHHCCTTBEC---------------SSSSSBSSEEEEESS----HHHHHHH-HTT----E-EEGGG-S
T ss_pred HHHHHHHHHHHHHHHHHhcCcc---------------cCCCCceeeeeecCC--c-HHHHHHH-HHHHhcCC-CccccCC
Confidence 6777777888888887652111 1112232 222222 1 3333443 33333211 1111334
Q ss_pred CeEEEEeec--ChhhHHHHHHHH
Q 024997 232 RFVRLSLLK--SQDDFDLLLHRL 252 (259)
Q Consensus 232 ~~~Ris~~~--~~~~~~~~~~~l 252 (259)
+.+-+|+.- ++++++.+++.+
T Consensus 407 ~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 407 GALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp SEEEEE--TT--HHHHHHHHH--
T ss_pred CeEEEEccCCCCHHHHHHHHhcC
Confidence 577788754 778888877653
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=96.27 E-value=0.37 Score=46.58 Aligned_cols=203 Identities=11% Similarity=0.041 Sum_probs=107.0
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEecc---c
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTI---S 91 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~---S 91 (259)
+++..+++++.+.+++..+++.+|| -.|.+. .+++++.|+++|+- +- ..-....-++..+-+|.+++. .
T Consensus 194 ~~i~~~~~~~~~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~~-~d~laL~ll~~Pge~GADI~vG~~Q~fG 271 (954)
T PRK12566 194 FELVVDAVDNLAAHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACVA-ADLLSLLVLTPPGELGADVVLGSTQRFG 271 (954)
T ss_pred cEEEEcchhhcCCCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEEE-eCHHHHhCCCChhhcCCcEEeeCCCcCC
Confidence 3444566666666678888888886 567664 37889999876533 22 000011112344456666532 1
Q ss_pred --cccCCCcceEEEEEecCHHHHHHH----------------------------HHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 92 --KLTGHAGSRFGWAVIKDEAVYQRM----------------------------SAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 92 --K~~g~~G~R~G~i~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
=.||.|+ .||+.+. +++..++ ++-+.....|.+....+.++.++-..
T Consensus 272 vp~~~GGP~--ag~~a~~-~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~ 348 (954)
T PRK12566 272 VPMGYGGPH--AAYFACR-DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVY 348 (954)
T ss_pred CCCCCCCCC--eeeeeeh-HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHH
Confidence 2233344 7888888 4665554 11111222333332222333333221
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCee--EEEecCCCchHHHHHHHHHcCe
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAY--AWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~gi 219 (259)
.+.+=+.+.-++...+...+.+.|++.+ +.+ ... .+| +.+++.. +.+.+.....+.||
T Consensus 349 ---~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~-------------~~~--~fF~~~~v~~~~-~~~~~~~~a~~~~~ 408 (954)
T PRK12566 349 ---HGPEGLKRIAQRVHRLTAILAAGLEAKG-IKR-------------LNR--HFFDTLTLEVGG-AQAAIIESAEAARI 408 (954)
T ss_pred ---hChHHHHHHHHHHHHHHHHHHHHHHhcC-Ccc-------------ccC--CccceEEEEccC-CHHHHHHHHHHCCC
Confidence 1233344555556667777777787733 221 111 222 2233321 24445455556788
Q ss_pred eeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHH
Q 024997 220 IGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 220 ~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~ 253 (259)
-++- .+.+.+.+|+.. +.++++.++..+.
T Consensus 409 n~r~-----~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 409 NLRI-----LGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred eeEE-----eCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 8876 234678888854 7788888888773
No 384
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=95.65 E-value=1.4 Score=38.61 Aligned_cols=206 Identities=14% Similarity=0.105 Sum_probs=107.4
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhH------HHhhcCCCcEEEeeccccCCCCC---CCCCCCCCeEEEeccccc-
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMN------KAVLKGPYAKSIYDHAYFWPHFA---PIPAPADEELMIFTISKL- 93 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~------~~la~~~~~~vi~De~y~~~~~~---~~~~~~~~~i~~~S~SK~- 93 (259)
|.+.|++....++..+++..|+ -.|... .+.++.+|+++++=. .+--. .-|+..+-+|++|+..-+
T Consensus 199 d~~~l~~~~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~a---DplaL~LL~pPGe~GADIvvG~~QrfG 274 (450)
T COG0403 199 DLDDLESADDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAA---DPLALGLLKPPGEFGADIVVGSAQRFG 274 (450)
T ss_pred hhhhhhhccccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEe---chhHhhccCCccccCCceEEecCcccC
Confidence 4556666623477888888887 666333 378889988777653 22111 112445567888776644
Q ss_pred --cCCCcceEEEEEecCHHHHHHH----------------------------HHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 94 --TGHAGSRFGWAVIKDEAVYQRM----------------------------SAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 94 --~g~~G~R~G~i~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
+|.-|=-.||..+. +++..++ ++-+.....|.+....+.++.+.-.+
T Consensus 275 vPmgfGGPhag~fA~~-~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~-- 351 (450)
T COG0403 275 VPMGFGGPHAGYFAVK-DEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVY-- 351 (450)
T ss_pred CCcCCCCcceeeeeEh-HhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHH--
Confidence 22334457888887 4655443 11122223343333333333333332
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCe--eEEEecCCCchHHHHHHHHHcCeee
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPA--YAWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
.+.+=+.+.-++.-+....+.+.|++.+. . +..... .+ -+.++++....+.+.+.....|+-+
T Consensus 352 -hGp~GLk~iA~r~~~~a~~la~~L~~~~~----g--------~~~~~~--~fFdt~~v~~~~~~~~~l~~~~~~~G~~L 416 (450)
T COG0403 352 -HGPQGLKEIAERIHRLAAYLAAGLKEIGA----G--------VELVFD--HFFDTFTVRVPEEVAEALLAAAIAGGINL 416 (450)
T ss_pred -hChHHHHHHHHHHHHHHHHHHHHHhhcCC----c--------eEeccc--cceeeEEEecchhHHHHHHHHHHhcCCce
Confidence 23344556666666677777777775431 0 111111 22 2334444211222223333456666
Q ss_pred ecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 222 REGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
+. ++ ...+=+|+.. ++++++.+++.+....
T Consensus 417 ~~---~~--~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 417 RR---VD--ADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred ee---ec--CCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 55 22 3466667643 6788998888876543
No 385
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=95.04 E-value=0.37 Score=42.00 Aligned_cols=229 Identities=14% Similarity=0.067 Sum_probs=121.0
Q ss_pred ccChhhhcccC---CC--CceEEEEcCC-CCCChhhH-----HHhhcCCCcEEEeeccccCCCCC------CCCCCCCCe
Q 024997 22 EGEANLWGNAS---SD--THLVEFVTAP-NNPDGQMN-----KAVLKGPYAKSIYDHAYFWPHFA------PIPAPADEE 84 (259)
Q Consensus 22 ~~d~~~l~~~~---~~--~~~~i~i~~p-~NPtG~~~-----~~la~~~~~~vi~De~y~~~~~~------~~~~~~~~~ 84 (259)
++++++||+.+ .. .+-+++.++. .-..|..= +++|++|++|+.+|.++.+.-.. .+.+...-.
T Consensus 234 km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~ 313 (510)
T KOG0629|consen 234 KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN 313 (510)
T ss_pred ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC
Confidence 67788898877 12 2335455554 34556553 48999999999999999521111 121222223
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh------------hhcCCCCHHHHHH-----HHHHHHHHHhcCCc
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS------------LNTMGVSRECQLR-----AFKLLKVVLEDGGN 147 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~------------~~~~~~~~~~q~~-----~~~~l~~~~~~~~~ 147 (259)
=+..+..|..| +.+..+......+.+++.++.... .... .....|.. ...++..-+. +.
T Consensus 314 SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DT-gdK~iQCGRh~D~FKlWlmwkaK--G~ 389 (510)
T KOG0629|consen 314 SVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDT-GDKAIQCGRHVDVFKLWLMWKAK--GT 389 (510)
T ss_pred ceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeeccccc-ccchhhcCccccHHHHHHHHHhc--cc
Confidence 34667789998 667777766654556666544211 0000 11122222 1122222111 23
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCccc-cccccccccceeeCCCCCee------EEEecCCCchHHHHHHHHHcCee
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSLQ-EIAPQYCTYFKKIRPPSPAY------AWVKCEREEDKDCYGILKAAKII 220 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ll~~~gi~ 220 (259)
.-+++..++..+..+++.+.+++.+++... ...++..++.-+..|++--. -+..+.......-..++ +.|..
T Consensus 390 ~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~ 468 (510)
T KOG0629|consen 390 QGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMM-KKGTT 468 (510)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHH-hccce
Confidence 336777888999999999999998875432 22233233211122221000 00000000122333444 34554
Q ss_pred eecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHH
Q 024997 221 GREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDEL 255 (259)
Q Consensus 221 ~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~ 255 (259)
...-...+..++++|+-++. +.++++-.++.|.++
T Consensus 469 Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 469 MIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred eeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 44322333347899999866 567788888777665
No 386
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=92.86 E-value=0.55 Score=39.13 Aligned_cols=86 Identities=17% Similarity=0.198 Sum_probs=58.3
Q ss_pred ccChhhhcccCCCCceEEEEcCC----CCCChhhHH-----Hhhc--CCCcEEEeeccc--c-CC-CCCCCCCCCCCeEE
Q 024997 22 EGEANLWGNASSDTHLVEFVTAP----NNPDGQMNK-----AVLK--GPYAKSIYDHAY--F-WP-HFAPIPAPADEELM 86 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p----~NPtG~~~~-----~la~--~~~~~vi~De~y--~-~~-~~~~~~~~~~~~i~ 86 (259)
.+|.+.++..+++++|+|-|.-- .-|+=.+.. +..+ ..|+++.+|++| | +. .... -..+++
T Consensus 152 kiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~----vGaDli 227 (416)
T COG4100 152 KIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTH----VGADLI 227 (416)
T ss_pred cccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCccc----cchhhh
Confidence 67888899999999999776542 235555541 3334 368999999999 5 21 1111 133677
Q ss_pred EeccccccCC----CcceEEEEEecCHHHHHHH
Q 024997 87 IFTISKLTGH----AGSRFGWAVIKDEAVYQRM 115 (259)
Q Consensus 87 ~~S~SK~~g~----~G~R~G~i~~~~~~~~~~~ 115 (259)
.+|+-|--|. +| ||+++. ++++++.
T Consensus 228 AGSLIKNpGGgiaktG---GYiaGk-~~~ve~~ 256 (416)
T COG4100 228 AGSLIKNPGGGIAKTG---GYIAGK-AELVEAA 256 (416)
T ss_pred ccceeeCCCCceeecc---ceeech-HHHHHhh
Confidence 8888887642 45 899988 7888764
No 387
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=92.24 E-value=7.9 Score=34.39 Aligned_cols=68 Identities=9% Similarity=0.066 Sum_probs=40.9
Q ss_pred ceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHh
Q 024997 187 FKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELI 256 (259)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l 256 (259)
|....+..--.+++++++. +..+..++-....|.+.|.+.- +.-.+|++++. +.++++++.+.|.+..
T Consensus 396 FE~~~~~~lgLvcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~--gk~vlRf~V~s~~t~~~di~~a~~~I~~~a 469 (511)
T KOG0628|consen 396 FEIVNKRILGLVCFRLKGDNEINEALLNRLNSSGRIHLVPASLH--GKFVLRFAVCSPLTNESDIDEAWKIIFEAA 469 (511)
T ss_pred ceeecccccceeEEeecCCcHHHHHHHHHHHhcCcEEEEEeeec--ceEEEEEEecCCCCcHHHHHHHHHHHHHHH
Confidence 3333343333445555554 2455555555567777774322 35678999965 6778888888877654
No 388
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=87.58 E-value=1.4 Score=38.74 Aligned_cols=102 Identities=12% Similarity=0.090 Sum_probs=63.3
Q ss_pred hhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH------HHhhcCCCcEEEeeccccCCCCCCC-
Q 024997 11 TDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN------KAVLKGPYAKSIYDHAYFWPHFAPI- 77 (259)
Q Consensus 11 ~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~------~~la~~~~~~vi~De~y~~~~~~~~- 77 (259)
+.+.|.+++ +-.+|+++|++.+.+++.++.++|||- .|..= .++.+++|..+..|.+-+ +.....
T Consensus 174 Aam~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANl-NA~vG~~ 251 (496)
T COG1003 174 AAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANL-NAIVGLA 251 (496)
T ss_pred HhhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcch-hhhhccc
Confidence 445555542 237899999999999999999999972 22221 477889999999998763 111111
Q ss_pred -CCCCCCeEEEeccccccCC----CcceEEEEEecCHHHHHHH
Q 024997 78 -PAPADEELMIFTISKLTGH----AGSRFGWAVIKDEAVYQRM 115 (259)
Q Consensus 78 -~~~~~~~i~~~S~SK~~g~----~G~R~G~i~~~~~~~~~~~ 115 (259)
++..+-+++=--+.|+|+. -|=-+|=|... +++.+.+
T Consensus 252 rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk-~~L~pfL 293 (496)
T COG1003 252 RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVK-AHLAPFL 293 (496)
T ss_pred cccccccceEEeecccccccCCCCCCCCCCceehH-hhccccC
Confidence 2333445555567777742 12226666666 4555543
No 389
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=83.56 E-value=15 Score=34.42 Aligned_cols=151 Identities=13% Similarity=0.021 Sum_probs=82.7
Q ss_pred ccccChhhhcccCC----C--CceEEEEcCCCCCChhhH-----HHhh---cCCCc--EEEeeccc--cC-CCC------
Q 024997 20 KFEGEANLWGNASS----D--THLVEFVTAPNNPDGQMN-----KAVL---KGPYA--KSIYDHAY--FW-PHF------ 74 (259)
Q Consensus 20 ~~~~d~~~l~~~~~----~--~~~~i~i~~p~NPtG~~~-----~~la---~~~~~--~vi~De~y--~~-~~~------ 74 (259)
.+++|+++|++.+. . .+.+||-+..+-.+|.+= .++| +++|+ |+.+|.|| |. .-+
T Consensus 257 ~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~ 336 (608)
T TIGR03811 257 NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDN 336 (608)
T ss_pred CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccc
Confidence 46899999988772 2 234556666677899885 2666 66787 79999999 31 000
Q ss_pred -CC-------------C---------------CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh---
Q 024997 75 -AP-------------I---------------PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN--- 122 (259)
Q Consensus 75 -~~-------------~---------------~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~--- 122 (259)
.+ + .+...-.=+.-.++|.+. .-.-.|.++..++++.+.+.....+.
T Consensus 337 ~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~ 415 (608)
T TIGR03811 337 FIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEK 415 (608)
T ss_pred ccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccc
Confidence 00 0 011222335677889975 44567888888776655442211111
Q ss_pred -----------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc
Q 024997 123 -----------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS 171 (259)
Q Consensus 123 -----------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 171 (259)
+...+.+.-.++..++..-.-+.+.+-+.+...+..+..+++.+.|+..
T Consensus 416 ~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 416 GADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred cccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1122222211221111110000122345666777778888888888774
No 390
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=78.30 E-value=39 Score=28.33 Aligned_cols=203 Identities=15% Similarity=0.058 Sum_probs=106.4
Q ss_pred CCceEEEEcCCCCCChhhHHHhh--cCCCcEEEeeccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHH
Q 024997 34 DTHLVEFVTAPNNPDGQMNKAVL--KGPYAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEA 110 (259)
Q Consensus 34 ~~~~~i~i~~p~NPtG~~~~~la--~~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~ 110 (259)
++.+.+++|.---.-|.-+..+. .-+|.++|.|-.- .+.+-+ +-...-+++..--|-.|.+| +-.++.. ++
T Consensus 147 ~da~yvyyCaNETVHGVEf~~~P~~~~~~~vlVaDmSS---nflSrpvDvsk~gvi~aGAQKN~G~aG--~Tvvivr-~d 220 (370)
T KOG2790|consen 147 PDASYVYYCANETVHGVEFDFIPVNDPKGAVLVADMSS---NFLSRPVDVSKFGVIFAGAQKNVGPAG--VTVVIVR-KD 220 (370)
T ss_pred CCccEEEEecCceeeceecCCCCCCCCCCceEEEeccc---chhcCCccchhcceEEeccccccCccc--cEEEEEe-hh
Confidence 44455566554444455554444 4477888888743 122211 22334566777789999898 4445556 47
Q ss_pred HHHHHHHh------------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 024997 111 VYQRMSAY------------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQE 178 (259)
Q Consensus 111 ~~~~~~~~------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 178 (259)
++..-... ...+..-++.+..++.-..++..++. .-+....+.-.+..+.+.+.+....++-.-.
T Consensus 221 llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~---GGl~a~e~~n~~KskllYd~iD~s~gfy~cp 297 (370)
T KOG2790|consen 221 LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEK---GGLAAMEKLNQEKSKLLYDAIDNSNGFYRCP 297 (370)
T ss_pred hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHhcCCeEEcc
Confidence 66643221 11111223334444444445544322 2234445555666777888887654321100
Q ss_pred ccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 179 IAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
+.+ ...+-|-+.+++... +.+++.+..+++=+.+ -|.. . -|.+|.|+=. +.++.+.++.-+++
T Consensus 298 Ve~---------~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~L-KGhR--S-VGGiRASlYNAisv~~~q~L~~~m~~ 364 (370)
T KOG2790|consen 298 VEP---------SVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQL-KGHR--S-VGGIRASLYNAISVEEVQKLAAFMKE 364 (370)
T ss_pred cch---------hhhhhcccceeecchHHHHHHHHHHHHhhhhcc-cccc--c-cccchhhhhccccHHHHHHHHHHHHH
Confidence 000 123334444555432 4566777665543333 3321 1 3568999733 88888888888887
Q ss_pred Hhhh
Q 024997 255 LISK 258 (259)
Q Consensus 255 ~l~~ 258 (259)
+.++
T Consensus 365 F~k~ 368 (370)
T KOG2790|consen 365 FQKK 368 (370)
T ss_pred HHHh
Confidence 7653
No 391
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=54.66 E-value=24 Score=24.88 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=32.9
Q ss_pred chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+...|.++|+.+.-.+.-|. ..+-.=+=++.+++++++.++.|++.+++
T Consensus 12 Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 12 DADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhcC
Confidence 556677777789998766554442 22222334455889999999999987763
No 392
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=43.04 E-value=44 Score=26.44 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=29.7
Q ss_pred CCCceEEEEcCC-CCCChhhHHHhhcCCCcEEEeeccc
Q 024997 33 SDTHLVEFVTAP-NNPDGQMNKAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 33 ~~~~~~i~i~~p-~NPtG~~~~~la~~~~~~vi~De~y 69 (259)
+++..+++++|- -||-+.-+++++++.|+.+|.=-+.
T Consensus 103 ~~~DVliviSnSGrNpvpie~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 103 RPNDVLIVISNSGRNPVPIEVAEYAREKGAKVIAVTSL 140 (243)
T ss_pred CCCCEEEEEeCCCCCCcchHHHHHHHhcCCeEEEEehh
Confidence 566667677776 4999999999999999988876543
No 393
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=40.83 E-value=89 Score=19.41 Aligned_cols=46 Identities=20% Similarity=0.229 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..+...|.+.||-+.- ...+....++|+.-+.++.++++++|.+.+
T Consensus 19 ~ki~~~L~~~~I~v~~---i~~~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 19 ARGLAALAEAGIEPIA---AHQSMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHCCCCEEE---EEecCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 4455556778887743 112345679999779999999999998765
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=37.85 E-value=52 Score=27.30 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=55.0
Q ss_pred HHhhcCCCcEEEeeccc-cCC--CCCCCC---CCCCCeEEEeccccccCCCcceEE-EEEe-cCHHHHHHHHHhhhhhcC
Q 024997 53 KAVLKGPYAKSIYDHAY-FWP--HFAPIP---APADEELMIFTISKLTGHAGSRFG-WAVI-KDEAVYQRMSAYISLNTM 124 (259)
Q Consensus 53 ~~la~~~~~~vi~De~y-~~~--~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G-~i~~-~~~~~~~~~~~~~~~~~~ 124 (259)
+.+|..|++.=|+.++| ... -...+. ....-.-++.|+-|-|-.| +| .+++ -...+++.+.........
T Consensus 180 aaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp---vggaiia~fk~n~iq~iak~ypgras 256 (432)
T KOG3843|consen 180 AAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMYPGRAS 256 (432)
T ss_pred HHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee---cchhHhhHhHHHHHHHHHHhCCCccc
Confidence 58899999999999999 210 011111 1222345688999998544 33 3332 112455555543332222
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 125 GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
..+.. -.....+..- .....+.+.+.++...+.++++.+.-+.++
T Consensus 257 a~ps~--dllitll~~g-qn~f~e~~~eqkemf~~l~~ki~~~ae~~~ 301 (432)
T KOG3843|consen 257 ASPSL--DLLITLLSLG-QNAFKELFGEQKEMFLKLRNKIIKFAEAIG 301 (432)
T ss_pred cCccH--HHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222 3333333210 001223344445555555555555555544
No 395
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=37.36 E-value=99 Score=18.95 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
......|.+.+|.+.. .+...+++|+--+.++.++++++|.+.+
T Consensus 18 ~~~~~~L~~~~i~~i~-----~~~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 18 GPALEVFGKKPVHLVS-----QAANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHhcCCceEEE-----EeCCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 3344445566776643 3345679998778899999999997654
No 396
>cd00330 phosphagen_kinases Phosphagen (guanidino) kinases. Phosphagen (guanidino) kinases are enzymes that transphosphorylate a high energy phosphoguanidino compound, like phosphocreatine (PCr) in the case of creatine kinase (CK) or phosphoarginine in the case of arginine kinase, which is used as an energy-storage and -transport metabolite, to ADP, thereby creating ATP. The substrate binding site is located in the cleft between the N and C-terminal domains, but most of the catalytic residues are found in the larger C-terminal domain. In higher eukaryotes, CK exists in tissue-specific (muscle, brain), as well as compartment-specific (mitochondrial and cytosolic) isoforms. They are either coupled to glycolysis (cytosolic form) or oxidative phosphorylation (mitochondrial form). Besides CK and AK, the most studied members of this family are also other phosphagen kinases with different substrate specificities, like glycocyamine kinase (GK), lombricine kinase (LK), taurocyamine kinase (TK) a
Probab=35.35 E-value=2.4e+02 Score=23.01 Aligned_cols=63 Identities=16% Similarity=0.028 Sum_probs=39.7
Q ss_pred eEEEecCCCc--hHHHHHHHHHcCeeeecCCcccC--CCCeEEEE----eecChhh-HHHHHHHHHHHhhhC
Q 024997 197 YAWVKCEREE--DKDCYGILKAAKIIGREGKKFRA--EARFVRLS----LLKSQDD-FDLLLHRLDELISKE 259 (259)
Q Consensus 197 ~~~~~~~~~~--~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris----~~~~~~~-~~~~~~~l~~~l~~~ 259 (259)
-+.+.+|... .+.+...+.+.|+.++....=+. ..+.+.|| ++.++++ ++.+.+.+.+++++|
T Consensus 163 SV~lhLP~L~~~~~~~~~~~~~lgl~vRG~~Ge~s~~~g~i~~ISN~~tLG~tE~eii~~l~~~v~~li~~E 234 (236)
T cd00330 163 SVHIHLPALVKTINRIIPAINQLGLQVRGTYGEGTEAVGGVFDISNQIRLGKSEQDIVEDLNDGAAQLIEME 234 (236)
T ss_pred EEEEECcchhhcHHHHHHHHHHcCceEeecCCCCCcccCCEEEEEcccccccCHHHHHHHHHHHHHHHHHHh
Confidence 4456666653 36678888899999986332222 24566666 3445555 566777777877765
No 397
>cd07930 bacterial_phosphagen_kinase Phosphagen (guanidino) kinases found in bacteria. Phosphagen (guanidino) kinases are enzymes that transphosphorylate a high energy phosphoguanidino compound, such as phosphocreatine (PCr) or phosphoarginine, which is used as an energy-storage and -transport metabolite, to ADP, thereby creating ATP. This subfamily is specific to bacteria and lacks an N-terminal domain, which otherwise forms part of the substrate binding site. Most of the catalytic residues are found in the larger C-terminal domain, however, which appears conserved in these bacterial proteins. Their functions have not been characterized.
Probab=35.07 E-value=2.4e+02 Score=22.81 Aligned_cols=63 Identities=11% Similarity=-0.000 Sum_probs=38.9
Q ss_pred eEEEecCCCc----hHHHHHHHHHcCeeeecCCcccC--CCCeEEEEe----ecChhh-HHHHHHHHHHHhhhC
Q 024997 197 YAWVKCEREE----DKDCYGILKAAKIIGREGKKFRA--EARFVRLSL----LKSQDD-FDLLLHRLDELISKE 259 (259)
Q Consensus 197 ~~~~~~~~~~----~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~----~~~~~~-~~~~~~~l~~~l~~~ 259 (259)
.+.+.+|... .+.+...+.+.|+.++....=+. ..+.+.||- +.++++ ++.+.+.+.+++++|
T Consensus 156 Sv~lhLP~L~~~~~i~~~~~~~~~~gl~vrg~~ge~s~~~g~iy~ISN~~tLG~tE~eii~~l~~~v~~ii~~E 229 (232)
T cd07930 156 SVMLHLPALVLTGQINRILNALSQLGLAVRGLYGEGSEALGNIYQISNQVTLGLSEEEIIENLESVVRQIIEQE 229 (232)
T ss_pred EEEEEcccccccccHHHHHHHHHHCCeEEecccCCCCcccCCEEEEECcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 4455666552 34688889899999987432222 245667763 445555 555667777777654
No 398
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=34.25 E-value=1.1e+02 Score=18.73 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..+...|.+.||-+.- ...+..-..+|+.-+.++.+++++.|.+.+
T Consensus 18 ~~i~~aL~~~~I~v~~---i~~g~s~~sis~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 18 ERAFHVLYTKGVNVQM---ISQGASKVNISLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHCCCCEEE---EEecCccceEEEEEeHHHHHHHHHHHHHHH
Confidence 4455556788887743 112334568888778899999999998765
No 399
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=31.46 E-value=1.2e+02 Score=18.19 Aligned_cols=47 Identities=17% Similarity=0.109 Sum_probs=31.0
Q ss_pred hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 207 DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
...+...|.+.||.+.--. .+. ...++++.-+.++.++++++|.+.+
T Consensus 18 ~~~i~~~l~~~~I~v~~i~-~~~--s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 18 AATFFSALAKANVNIRAIA-QGS--SERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEE-ecC--cccEEEEEEeHHHHHHHHHHHHHHH
Confidence 3445666778888774321 111 2268888778888888899887755
No 400
>cd04924 ACT_AK-Arch_2 ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). Included in this CD is the second of two ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). The first or N-terminal ACT domain of these proteins cluster with the ThrA-like ACT 1 domains (ACT_AKi-HSDH-ThrA-like_1) which includes the threonine-sensitive archaeal Methanococcus jannaschii aspartokinase ACT 1 domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=30.26 E-value=1.3e+02 Score=18.06 Aligned_cols=47 Identities=15% Similarity=0.080 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
..+...|.+.||.+.--.. +. ...+++|.-+.++.++++++|.+.+.
T Consensus 19 ~~i~~~L~~~~I~v~~i~q-~~--s~~~isf~i~~~~~~~~~~~Lh~~~~ 65 (66)
T cd04924 19 GRVFGALGKAGINVIMISQ-GS--SEYNISFVVAEDDGWAAVKAVHDEFG 65 (66)
T ss_pred HHHHHHHHHCCCCEEEEEe-cC--ccceEEEEEeHHHHHHHHHHHHHHhc
Confidence 3455556678887643211 11 22688887788889999999887653
No 401
>cd04891 ACT_AK-LysC-DapG-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the first and third, of four, ACT domains present in cyanobacteria AK. Also included are the N-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (Bacillus subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=29.42 E-value=1.2e+02 Score=17.51 Aligned_cols=45 Identities=16% Similarity=0.080 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHH
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRL 252 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l 252 (259)
..+...|.++||.+.--......++...+++.-+.++.+.+++.+
T Consensus 16 ~~i~~~L~~~~i~i~~i~~~~~~~~~~~is~~v~~~~~~~~~~~l 60 (61)
T cd04891 16 AKIFSALAEAGINVDMIVQSVSRGGTTDISFTVPKSDLEKALAIL 60 (61)
T ss_pred HHHHHHHHHcCCcEEEEEEcCCCCCcEEEEEEEeHHHHHHHHHHh
Confidence 446666667888775422222222347888876778887776654
No 402
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=27.89 E-value=1.5e+02 Score=18.07 Aligned_cols=45 Identities=22% Similarity=0.174 Sum_probs=32.6
Q ss_pred hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 207 DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
...+...|.+.||-+.... ..-..+|+.-+.++.++++++|.+.+
T Consensus 18 ~~~if~aL~~~~I~v~~~~-----~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 18 MAKIVGALSKEGIEILQTA-----DSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHCCCCEEEEE-----cCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 3455556678899886422 24468888778899999999998765
No 403
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=27.18 E-value=26 Score=18.55 Aligned_cols=11 Identities=36% Similarity=0.749 Sum_probs=8.3
Q ss_pred cCCCCCChhhH
Q 024997 42 TAPNNPDGQMN 52 (259)
Q Consensus 42 ~~p~NPtG~~~ 52 (259)
.+|+||+|..+
T Consensus 18 is~~~P~G~~W 28 (32)
T PF06462_consen 18 ISPSNPEGTSW 28 (32)
T ss_pred CCCCCCCCCCc
Confidence 46889999754
No 404
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.99 E-value=4e+02 Score=22.67 Aligned_cols=60 Identities=8% Similarity=0.088 Sum_probs=40.7
Q ss_pred EEecCCCchHHHHHHHHHcCeeeecCCccc-CCCCeEEEEeec-----ChhhHHHHHHHHHHHhhh
Q 024997 199 WVKCEREEDKDCYGILKAAKIIGREGKKFR-AEARFVRLSLLK-----SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 199 ~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~-~~~~~~Ris~~~-----~~~~~~~~~~~l~~~l~~ 258 (259)
++..+.........++...|..|.|..... .+.+..++.+.. ..++++...+++.+++++
T Consensus 215 FFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~~g~~y~l~i~p~~~~~~~~D~~~~a~~mn~~~E~ 280 (308)
T COG1560 215 FFGVPAATTTGPAKLARLTGAAVVPVFPVRNPDGSGYTLHIHPPMTDDPSEDVEADAQRMNDFVEK 280 (308)
T ss_pred cCCCcccccchHHHHHHHhCCCEEEEEEEEeCCCCeEEEEEeccccCCCCCCHHHHHHHHHHHHHH
Confidence 333443345667788888899999866555 344567888744 346678888888877764
No 405
>COG5319 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.95 E-value=2.8e+02 Score=20.19 Aligned_cols=23 Identities=4% Similarity=-0.016 Sum_probs=17.0
Q ss_pred chHHHHHHHHHcCeeeecCCcccC
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
+.+.+..|++ .||-+.|..-|..
T Consensus 117 S~eEa~aL~E-dGvei~PLpv~p~ 139 (142)
T COG5319 117 SHEEAKALAE-DGVEIAPLPVFPD 139 (142)
T ss_pred CHHHHHHHHH-cCceeccCCCCCC
Confidence 5677777775 6999999766653
No 406
>cd07931 eukaryotic_phosphagen_kinases Phosphagen (guanidino) kinases mostly found in eukaryotes. Phosphagen (guanidino) kinases are enzymes that transphosphorylate a high energy phosphoguanidino compound, like phosphocreatine (PCr) in the case of creatine kinase (CK) or phosphoarginine in the case of arginine kinase, which is used as an energy-storage and -transport metabolite, to ADP, thereby creating ATP. The substrate binding site is located in the cleft between the N and C-terminal domains, but most of the catalytic residues are found in the larger C-terminal domain. In higher eukaryotes, CK exists in tissue-specific (muscle, brain), as well as compartment-specific (mitochondrial and cytosolic) isoforms. They are either coupled to glycolysis (cytosolic form) or oxidative phosphorylation (mitochondrial form). Besides CK and AK, the most studied members of this family are also other phosphagen kinases with different substrate specificities, like glycocyamine kinase (GK), lombricine k
Probab=24.57 E-value=3e+02 Score=23.76 Aligned_cols=63 Identities=19% Similarity=0.065 Sum_probs=40.4
Q ss_pred eEEEecCCCc-h-HHHHHHHHHcCeeeecCCccc--CCCCeEEEEe----ecChhh-HHHHHHHHHHHhhhC
Q 024997 197 YAWVKCEREE-D-KDCYGILKAAKIIGREGKKFR--AEARFVRLSL----LKSQDD-FDLLLHRLDELISKE 259 (259)
Q Consensus 197 ~~~~~~~~~~-~-~~~~~ll~~~gi~~~~g~~f~--~~~~~~Ris~----~~~~~~-~~~~~~~l~~~l~~~ 259 (259)
.+.+.+|... . ..+...+++.|+.+|....=. ...+.+.||- +.++.+ ++.+.+.+.++++.|
T Consensus 265 SV~v~LP~L~~~~~~~~~~~~~lgL~vRG~~Ge~s~~~g~iydISN~~rLG~sE~eiv~~l~~gv~~li~~E 336 (338)
T cd07931 265 SVHVKLPNLIKDMDKLKAIARKLGLQIRGIGGEHSESEGGVVDISNKRRLGFSEVQLVQDMYDGVKKLIEEE 336 (338)
T ss_pred EEEEEcchhhhcHHHHHHHHHHcCceEeecCCCCccccCCEEEEEchhhcccCHHHHHHHHHHHHHHHHHHh
Confidence 4456666653 2 568888999999998633222 2246677763 444444 677778888887765
No 407
>PF00217 ATP-gua_Ptrans: ATP:guanido phosphotransferase, C-terminal catalytic domain; InterPro: IPR022414 ATP:guanido phosphotransferases are a family of structurally and functionally related enzymes [, ] that reversibly catalyse the transfer of phosphate between ATP and various phosphogens. The enzymes belonging to this family include: Glycocyamine kinase (2.7.3.1 from EC), which catalyses the transfer of phosphate from ATP to guanidoacetate. Arginine kinase (2.7.3.3 from EC), which catalyses the transfer of phosphate from ATP to arginine. Taurocyamine kinase (2.7.3.4 from EC), an annelid-specific enzyme that catalyses the transfer of phosphate from ATP to taurocyamine. Lombricine kinase (2.7.3.5 from EC), an annelid-specific enzyme that catalyses the transfer of phosphate from ATP to lombricine. Smc74, a cercaria-specific enzyme from Schistosoma mansoni []. Creatine kinase (2.7.3.2 from EC) (CK) [, ], which catalyses the reversible transfer of high energy phosphate from ATP to creatine, generating phosphocreatine and ADP. Creatine kinase plays an important role in energy metabolism of vertebrates. There are at least four different, but very closely related, forms of CK. Two isozymes, M (muscle) and B (brain), are cytosolic, while the other two are mitochondrial. In sea urchins there is a flagellar isozyme, which consists of the triplication of a CK-domain. A cysteine residue is implicated in the catalytic activity of these enzymes and the region around this active site residue is highly conserved. Eukaryotic phosphagen kinases consist of a small, ~100-residue, alpha-helical N-terminal domain and a larger, 250+- residue, C-terminal alpha/beta saddle domain in which many key residues involved in catalysis are found. The N-terminal domain undergoes significant conformational movements during catalysis, closing down on the catalytic pocket. It is involved in dimer formation. Bacterial phosphagen kinases have the large C-terminal domain seen in eukaryotic phosphagen kinases but lack the N-terminal domain [, , , ]. This entry represents the C-terminal catalytic domain of ATP:guanido phosphotransferase, which is comprised of a duplication where the common core consists of two beta-alpha-beta2-alpha repeats []. The substrate binding site is located in the cleft between N and C-terminal domains, but most of the catalytic residues are found in the larger C-terminal domain [].; GO: 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups; PDB: 3JU6_D 3JU5_D 1G0W_A 1QH4_C 1U6R_B 2CRK_A 2J1Q_A 3L2E_A 2GL6_F 1QK1_F ....
Probab=24.15 E-value=2.9e+02 Score=22.51 Aligned_cols=63 Identities=13% Similarity=0.075 Sum_probs=39.7
Q ss_pred eEEEecCCC--chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEe----ecChhh-HHHHHHHHHHHhhhC
Q 024997 197 YAWVKCERE--EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSL----LKSQDD-FDLLLHRLDELISKE 259 (259)
Q Consensus 197 ~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~----~~~~~~-~~~~~~~l~~~l~~~ 259 (259)
-+++.+|.. ..+.+...+.+.|+.++....-+. ..+.+.||- +.++.+ ++.+.+.+.++++.|
T Consensus 169 sv~lhLP~L~~~~~~~~~~~~~~gl~~rG~~ge~s~~~g~i~~ISN~~tLG~sE~eii~~l~~~v~~ii~~E 240 (243)
T PF00217_consen 169 SVMLHLPALSKSGEKLEEILRRLGLQVRGLYGEGSESLGNIYQISNQRTLGISEEEIIEDLIKIVKQIIEEE 240 (243)
T ss_dssp EEEEE-TTHHTSHTTHHHHHHHTTEEEEETTCTTSSTBTTEEEEEES-SSSS-HHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcHHHhhhhhHHHHHHhhCCeEEecCCCCCCcccccEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 455667765 226788888899999986443332 246889996 335554 666667777776654
No 408
>PRK06545 prephenate dehydrogenase; Validated
Probab=23.96 E-value=4.2e+02 Score=22.85 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=34.7
Q ss_pred eeEEEecCCC--chHHHHHHHHHcCeeeecCCcc---cCCCCeEEEEeecChhhHHHHHHHHHH
Q 024997 196 AYAWVKCERE--EDKDCYGILKAAKIIGREGKKF---RAEARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 196 ~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f---~~~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
+-+.+++++. ....+...+.+.||.+..-.-- +...+.+||+| .+.++.+.+.+.+.+
T Consensus 291 ~~~~v~v~d~pg~~~~~~~~~~~~~i~i~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 353 (359)
T PRK06545 291 YDLYVDVPDEPGVIARVTAILGEEGISIENLRILEAREDIHGVLQISF-KNEEDRERAKALLEE 353 (359)
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCCCeecceeeeccCCcCceEEEEe-CCHHHHHHHHHHHHh
Confidence 3555666665 2466667777889877653221 12357899999 444555555555543
No 409
>cd07932 arginine_kinase_like Phosphagen (guanidino) kinases such as arginine kinase and similar enzymes. Eukaryotic arginine kinase-like phosphagen (guanidino) kinases are enzymes that transphosphorylate a high energy phosphoguanidino compound, like phosphoarginine in the case of arginine kinase (AK), which is used as an energy-storage and -transport metabolite, to ADP, thereby creating ATP. The substrate binding site is located in the cleft between the N and C-terminal domains, but most of the catalytic residues are found in the larger C-terminal domain. Besides AK, one of the most studied members of this family, this model also represents a phosphagen kinase with different substrate specificity, hypotaurocyamine kinase (HTK).
Probab=23.78 E-value=3.4e+02 Score=23.58 Aligned_cols=63 Identities=13% Similarity=-0.008 Sum_probs=39.2
Q ss_pred eEEEecCCCc--hHHHHHHHHHcCeeeecCCccc--CCCCeEEEEe----ecChhh-HHHHHHHHHHHhhhC
Q 024997 197 YAWVKCEREE--DKDCYGILKAAKIIGREGKKFR--AEARFVRLSL----LKSQDD-FDLLLHRLDELISKE 259 (259)
Q Consensus 197 ~~~~~~~~~~--~~~~~~ll~~~gi~~~~g~~f~--~~~~~~Ris~----~~~~~~-~~~~~~~l~~~l~~~ 259 (259)
-+.+.+|... ...+...+.+.|+.+|....=+ ...+.+.||- +.++.+ ++.+.+.+.++++.|
T Consensus 276 SV~vhLP~L~~~~~~~~~~~~~lgL~vRG~~Ge~se~~G~iydISN~~~LG~tE~eiv~~l~~~v~~lI~~E 347 (350)
T cd07932 276 SVHIKLPKLSKDPPRLKEICEKYNLQVRGTHGEHTESVGGVYDISNKRRLGLTEFEAVKEMQDGVLELIKLE 347 (350)
T ss_pred EEEEECcccccchHHHHHHHHHcCceEeecCCCCCcccCCEEEEEcccccccCHHHHHHHHHHHHHHHHHHH
Confidence 4456666653 3568888899999998632222 2245666663 445544 666777777777654
No 410
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=23.54 E-value=53 Score=24.36 Aligned_cols=45 Identities=18% Similarity=0.083 Sum_probs=32.6
Q ss_pred cChhhhcccCCC-CceEEEEcCCCCCChhhHH----------HhhcCCCc-EEEeec
Q 024997 23 GEANLWGNASSD-THLVEFVTAPNNPDGQMNK----------AVLKGPYA-KSIYDH 67 (259)
Q Consensus 23 ~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~----------~la~~~~~-~vi~De 67 (259)
.+.+.|.+.+.+ .+..+++--|.|+.|...+ .+.++.+. +++.||
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DE 96 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDE 96 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 477788888744 7888899999999988873 44555654 555666
No 411
>PF13710 ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B.
Probab=22.95 E-value=1.7e+02 Score=18.10 Aligned_cols=49 Identities=12% Similarity=0.243 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCeeeecCCccc-CCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 208 KDCYGILKAAKIIGREGKKFR-AEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~-~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
..+..++...|+-+....--. ..++..|+.+.. +++.++.+.+.|.+++
T Consensus 7 ~Ri~~vf~rRg~nI~sl~v~~~~~~~~~riti~v~~~~~~i~~l~~Ql~Kli 58 (63)
T PF13710_consen 7 NRITGVFRRRGFNIESLSVGPTEDPGISRITIVVSGDDREIEQLVKQLEKLI 58 (63)
T ss_dssp HHHHHHHHTTT-EECEEEEEE-SSTTEEEEEEEEES-CCHHHHHHHHHHCST
T ss_pred HHHHHHHhcCCeEEeeEEeeecCCCCEEEEEEEEeeCchhHHHHHHHHhccC
Confidence 455666777787766543222 246788988855 4677888888887754
No 412
>PRK14420 acylphosphatase; Provisional
Probab=22.26 E-value=2.3e+02 Score=18.94 Aligned_cols=45 Identities=11% Similarity=0.087 Sum_probs=30.8
Q ss_pred hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHH
Q 024997 207 DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
...+..++.+.||.- .--..+.+.+.+-+..+++.+++.++.|++
T Consensus 18 R~~~~~~A~~~gl~G---~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 62 (91)
T PRK14420 18 RYFVQMEADKRKLTG---WVKNRDDGTVEIEAEGPEEALQLFLDAIEK 62 (91)
T ss_pred hHHHHHHHHHcCCEE---EEEECCCCcEEEEEEECHHHHHHHHHHHHh
Confidence 345566666777632 223344567999997788889999988864
No 413
>cd00716 creatine_kinase_like Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes. Eukaryotic creatine kinase-like phosphagen (guanidino) kinases are enzymes that transphosphorylate a high energy phosphoguanidino compound, like phosphocreatine (PCr) in the case of creatine kinase (CK), which is used as an energy-storage and -transport metabolite, to ADP, thereby creating ATP. The substrate binding site is located in the cleft between the N and C-terminal domains, but most of the catalytic residues are found in the larger C-terminal domain. In higher eukaryotes, CKs are found as tissue-specific (muscle, brain), as well as compartment-specific (mitochondrial, cytosolic, and flagellar) isoforms. Mitochondrial and cytoplasmic CKs are dimeric or octameric, while the flagellar isoforms are trimers with three CD domains fused as a single protein chain. CKs are either coupled to glycolysis (cytosolic form) or oxidative phosphorylation (mitochondrial form). Besides CK, one
Probab=22.17 E-value=3.4e+02 Score=23.68 Aligned_cols=63 Identities=19% Similarity=0.154 Sum_probs=39.2
Q ss_pred eEEEecCCCc-hHHHHHHHHHcCeeeecCCcccC--CCCeEEEEe----ecChhh-HHHHHHHHHHHhhhC
Q 024997 197 YAWVKCEREE-DKDCYGILKAAKIIGREGKKFRA--EARFVRLSL----LKSQDD-FDLLLHRLDELISKE 259 (259)
Q Consensus 197 ~~~~~~~~~~-~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~----~~~~~~-~~~~~~~l~~~l~~~ 259 (259)
-+.+.++... ...+.+++++.|+.+|....-.. ..+.+.||- +.++.+ ++.+.+.+.++++.|
T Consensus 278 SV~i~LP~L~~~~~~~~i~~~lgLqvRG~~Ge~se~~G~vydISN~~~LG~sE~eiv~~l~~gv~~lI~~E 348 (357)
T cd00716 278 SVHVKLPNLSKDPRFDEILRKLRLQKRGTGGVDTAAVGGTYDISNADRLGKSEVELVQFVIDGVNLLIEME 348 (357)
T ss_pred EEEEEccccccchhHHHHHHHcCCeeeccCCCCccccCCEEEEEcccccccCHHHHHHHHHHHHHHHHHHH
Confidence 4556666652 45577888899999886433222 246667663 445544 566667777777654
No 414
>cd04913 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is fee
Probab=21.73 E-value=2e+02 Score=17.45 Aligned_cols=48 Identities=19% Similarity=0.166 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
..+...|.++||-+.-........+..+++|.-+.++.+.+++.+.+.
T Consensus 17 ~~i~~~L~~~~I~i~~i~~~~~~~~~~~is~~v~~~d~~~~~~~l~~~ 64 (75)
T cd04913 17 AKIFGALAEANINVDMIVQNVSRDGTTDISFTVPKSDLKKALAVLEKL 64 (75)
T ss_pred HHHHHHHHHcCCeEEEEEeCCCCCCcEEEEEEecHHHHHHHHHHHHHH
Confidence 445566678898875332211122246788866778888877776653
No 415
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=21.42 E-value=1.2e+02 Score=24.87 Aligned_cols=83 Identities=12% Similarity=0.146 Sum_probs=46.0
Q ss_pred CCceEEEEcCCC-CCChhhHHHhhcCCC-cEEEee--ccccCCCCCC---CCCCCCCeEEEeccccccCCCcceEEE--E
Q 024997 34 DTHLVEFVTAPN-NPDGQMNKAVLKGPY-AKSIYD--HAYFWPHFAP---IPAPADEELMIFTISKLTGHAGSRFGW--A 104 (259)
Q Consensus 34 ~~~~~i~i~~p~-NPtG~~~~~la~~~~-~~vi~D--e~y~~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~--i 104 (259)
+.++.+++.-|+ +||..++.+++...+ -=+|+| ++||..+... +....=+.+-++|.. |..|.|-|| +
T Consensus 58 ~~pr~vWlMvPag~it~~vi~~la~~L~~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSG---G~~G~~~G~~lM 134 (300)
T COG1023 58 SAPRIVWLMVPAGDITDAVIDDLAPLLSAGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSG---GVWGAERGYCLM 134 (300)
T ss_pred CCCcEEEEEccCCCchHHHHHHHHhhcCCCCEEEECCccchHHHHHHHHHHHhcCCeEEeccCCC---CchhhhcCceEE
Confidence 356777888886 699999988877543 245667 4444211111 111111233355443 456666665 4
Q ss_pred EecCHHHHHHHHHhh
Q 024997 105 VIKDEAVYQRMSAYI 119 (259)
Q Consensus 105 ~~~~~~~~~~~~~~~ 119 (259)
++-|++..+.+....
T Consensus 135 iGG~~~a~~~~~pif 149 (300)
T COG1023 135 IGGDEEAVERLEPIF 149 (300)
T ss_pred ecCcHHHHHHHHHHH
Confidence 444466666665543
No 416
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=20.84 E-value=3e+02 Score=24.02 Aligned_cols=17 Identities=18% Similarity=0.262 Sum_probs=10.3
Q ss_pred CcceEEEEEecCHHHHHHHH
Q 024997 97 AGSRFGWAVIKDEAVYQRMS 116 (259)
Q Consensus 97 ~G~R~G~i~~~~~~~~~~~~ 116 (259)
.|||.|.|+ + ++...++
T Consensus 367 hgWRTgAII-~--EL~~Eik 383 (510)
T KOG2470|consen 367 HGWRTGAII-P--ELEREIK 383 (510)
T ss_pred cccccccch-H--HHHHHHh
Confidence 578888777 3 4444443
No 417
>cd04881 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) and related domains. The ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) encoded by the hom gene of Bacillus subtilis and other related sequences. HSDH reduces aspartate semi-aldehyde to the amino acid homoserine, one that is required for the biosynthesis of Met, Thr, and Ile from Asp. Neither the enzyme nor the aspartate pathway is found in the animal kingdom. This mostly bacterial HSDH group has a C-terminal ACT domain and is believed to be involved in enzyme regulation. A C-terminal deletion in the Corynebacterium glutamicum HSDH abolished allosteric inhibition by L-threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.78 E-value=2.2e+02 Score=17.45 Aligned_cols=49 Identities=18% Similarity=0.115 Sum_probs=29.3
Q ss_pred hHHHHHHHHHcCeeeecCCccc--C-CCCeEEEEeec-ChhhHHHHHHHHHHH
Q 024997 207 DKDCYGILKAAKIIGREGKKFR--A-EARFVRLSLLK-SQDDFDLLLHRLDEL 255 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~--~-~~~~~Ris~~~-~~~~~~~~~~~l~~~ 255 (259)
...+...+.++|+.+....... . +...+.+.+.. +.++++.++++|+++
T Consensus 14 l~~i~~~l~~~~i~I~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~i~~L~~~ 66 (79)
T cd04881 14 LAKITGILAEHGISIESVIQKEADGGETAPVVIVTHETSEAALNAALAEIEAL 66 (79)
T ss_pred HHHHHHHHHHcCCCeEEEEEcccCCCCceeEEEEEccCCHHHHHHHHHHHHcC
Confidence 3455566778888665432111 1 22335555533 788899999988853
No 418
>PRK05601 DNA polymerase III subunit epsilon; Validated
Probab=20.66 E-value=62 Score=28.28 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=27.1
Q ss_pred CCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccc
Q 024997 33 SDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y 69 (259)
+..+.++|++.+..-+|.. --|+++|+.++.|+.|
T Consensus 329 ~r~tslvv~n~~~~~~gk~--~~a~~~gipl~~d~~f 363 (377)
T PRK05601 329 TRQTSVVVCNQTRDLDGKA--MHAQRKGIPLLSDVAF 363 (377)
T ss_pred ccceeEEEeCCCCCccchh--hhhhhcCCCccCHHHH
Confidence 3567886666677777776 4678899999999988
No 419
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.61 E-value=2e+02 Score=22.99 Aligned_cols=68 Identities=6% Similarity=-0.084 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeec
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~ 223 (259)
+++.+..+.-.+.|+.++-..+....+-|...|....|-..++++.-.+.. .+.+.+.|+..|..+.|
T Consensus 101 Er~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~Vtaaa~~v-P~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 101 ERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRIIVTAAAPEV-PEALLDQLKPGGRLVIP 168 (209)
T ss_pred EEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEEEEeeccCCC-CHHHHHhcccCCEEEEE
Confidence 344455555555576665322222222233334333344444666655554 57777888899999998
No 420
>PF13840 ACT_7: ACT domain ; PDB: 3S1T_A 1ZHV_A 3AB4_K 3AB2_O 2DTJ_A 3AAW_A 2RE1_B 3MAH_A 1ZVP_D.
Probab=20.09 E-value=2.3e+02 Score=17.47 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=29.1
Q ss_pred hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHH
Q 024997 207 DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
...+...|.++||-+.--+ .+..+++--+.++++++++.|++
T Consensus 24 ~a~i~~~La~~~I~i~~is------S~~~~~ilV~~~~~~~A~~~L~~ 65 (65)
T PF13840_consen 24 AAKIFSALAEAGINIFMIS------SEISISILVKEEDLEKAVEALHE 65 (65)
T ss_dssp HHHHHHHHHHTTS-ECEEE------ESSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEE------EeeeEEEEEeHHHHHHHHHHhcC
Confidence 3556666778899776533 23367776688999999998874
Done!