Query 024997
Match_columns 259
No_of_seqs 117 out of 1357
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 18:11:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bwn_A AT1G70560, L-tryptophan 100.0 2.3E-38 7.8E-43 274.8 19.2 252 1-258 126-386 (391)
2 2hox_A ALLIIN lyase 1; cystein 100.0 2.1E-37 7.3E-42 271.6 21.8 256 1-259 162-425 (427)
3 1b5p_A Protein (aspartate amin 100.0 4.2E-36 1.4E-40 259.8 20.4 240 1-258 122-384 (385)
4 2r2n_A Kynurenine/alpha-aminoa 100.0 2.2E-34 7.6E-39 252.2 22.0 244 1-258 139-423 (425)
5 3b46_A Aminotransferase BNA3; 100.0 2E-34 6.8E-39 254.1 19.4 237 1-255 149-443 (447)
6 3dyd_A Tyrosine aminotransfera 100.0 9.3E-34 3.2E-38 248.5 22.4 239 1-258 149-423 (427)
7 3jtx_A Aminotransferase; NP_28 100.0 3.3E-34 1.1E-38 248.4 18.6 235 1-257 127-396 (396)
8 3fvs_A Kynurenine--oxoglutarat 100.0 5.2E-34 1.8E-38 249.2 19.4 243 1-258 122-421 (422)
9 2o1b_A Aminotransferase, class 100.0 7.3E-34 2.5E-38 247.4 19.8 238 1-258 140-402 (404)
10 2x5d_A Probable aminotransfera 100.0 7.8E-34 2.7E-38 247.6 18.4 238 1-258 130-397 (412)
11 3ihj_A Alanine aminotransferas 100.0 3.1E-34 1E-38 256.0 16.1 243 1-258 188-492 (498)
12 3aow_A Putative uncharacterize 100.0 1.6E-33 5.5E-38 248.4 20.3 239 1-258 171-444 (448)
13 3e2y_A Kynurenine-oxoglutarate 100.0 1.3E-33 4.5E-38 245.7 18.7 240 1-255 116-409 (410)
14 3d6k_A Putative aminotransfera 100.0 2.7E-33 9.2E-38 245.1 20.8 245 1-258 138-417 (422)
15 1yiz_A Kynurenine aminotransfe 100.0 2.4E-33 8.2E-38 245.7 19.9 244 1-259 132-429 (429)
16 1gd9_A Aspartate aminotransfer 100.0 2.4E-33 8.3E-38 242.5 19.6 238 1-258 118-385 (389)
17 1u08_A Hypothetical aminotrans 100.0 2.7E-33 9.4E-38 242.0 19.8 234 1-254 122-385 (386)
18 3h14_A Aminotransferase, class 100.0 2.1E-33 7.1E-38 243.2 18.9 235 1-258 122-381 (391)
19 3op7_A Aminotransferase class 100.0 2.3E-33 7.8E-38 241.5 18.9 238 1-258 112-370 (375)
20 2z61_A Probable aspartate amin 100.0 1.9E-33 6.5E-38 241.7 18.3 239 1-258 120-370 (370)
21 3tcm_A Alanine aminotransferas 100.0 1.4E-33 5E-38 251.9 17.9 243 1-258 189-493 (500)
22 3fdb_A Beta C-S lyase, putativ 100.0 1.3E-33 4.5E-38 243.0 17.0 240 1-258 112-375 (377)
23 3f6t_A Aspartate aminotransfer 100.0 8E-34 2.7E-38 255.3 16.0 243 1-258 200-524 (533)
24 2zy4_A L-aspartate beta-decarb 100.0 1.4E-33 4.7E-38 254.0 17.1 237 1-257 201-520 (546)
25 1j32_A Aspartate aminotransfer 100.0 4.5E-33 1.5E-37 240.7 19.2 238 1-258 121-386 (388)
26 3kax_A Aminotransferase, class 100.0 5.5E-33 1.9E-37 239.5 19.7 239 1-257 113-383 (383)
27 3ele_A Amino transferase; RER0 100.0 6.9E-33 2.4E-37 240.3 20.4 232 1-258 131-395 (398)
28 3nra_A Aspartate aminotransfer 100.0 1.7E-33 5.8E-38 244.6 15.9 239 1-258 133-404 (407)
29 1fg7_A Histidinol phosphate am 100.0 1.6E-32 5.3E-37 235.2 21.1 229 1-255 107-354 (356)
30 3k7y_A Aspartate aminotransfer 100.0 9.3E-34 3.2E-38 246.5 13.3 235 1-258 129-404 (405)
31 2dou_A Probable N-succinyldiam 100.0 5.7E-33 1.9E-37 239.2 17.7 235 1-256 118-375 (376)
32 2o0r_A RV0858C (N-succinyldiam 100.0 1.1E-32 3.8E-37 240.3 19.0 238 1-258 117-395 (411)
33 1c7n_A Cystalysin; transferase 100.0 1.2E-32 4.2E-37 238.8 19.1 240 1-258 120-392 (399)
34 3ei9_A LL-diaminopimelate amin 100.0 5.5E-33 1.9E-37 243.7 16.8 237 1-256 149-425 (432)
35 3ppl_A Aspartate aminotransfer 100.0 4.9E-32 1.7E-36 237.4 22.8 244 1-258 140-419 (427)
36 3qgu_A LL-diaminopimelate amin 100.0 4.7E-33 1.6E-37 245.3 16.1 240 1-259 162-440 (449)
37 3g0t_A Putative aminotransfera 100.0 1.7E-32 5.8E-37 240.7 19.4 241 1-258 140-436 (437)
38 3ezs_A Aminotransferase ASPB; 100.0 4.8E-33 1.6E-37 239.5 15.6 232 1-258 115-374 (376)
39 1o4s_A Aspartate aminotransfer 100.0 1.6E-32 5.5E-37 237.7 18.8 233 1-258 132-388 (389)
40 3dzz_A Putative pyridoxal 5'-p 100.0 1.9E-32 6.6E-37 236.6 19.3 240 1-258 116-388 (391)
41 1v2d_A Glutamine aminotransfer 100.0 2.4E-32 8.3E-37 235.7 18.8 237 1-258 109-370 (381)
42 3g7q_A Valine-pyruvate aminotr 100.0 6.3E-32 2.2E-36 235.6 21.6 240 1-258 135-412 (417)
43 1bw0_A TAT, protein (tyrosine 100.0 6.9E-32 2.4E-36 235.4 20.6 239 1-258 135-412 (416)
44 4dq6_A Putative pyridoxal phos 100.0 1.2E-31 3.9E-36 231.8 21.7 238 1-257 121-391 (391)
45 3l8a_A METC, putative aminotra 100.0 2.7E-32 9.3E-37 238.6 17.7 240 1-258 150-421 (421)
46 1xi9_A Putative transaminase; 100.0 2E-32 6.7E-37 238.3 16.6 238 1-258 132-402 (406)
47 1iay_A ACC synthase 2, 1-amino 100.0 6.9E-32 2.4E-36 236.4 20.0 240 1-259 139-427 (428)
48 3piu_A 1-aminocyclopropane-1-c 100.0 3.5E-32 1.2E-36 238.8 17.8 240 1-258 142-431 (435)
49 3ez1_A Aminotransferase MOCR f 100.0 1.3E-31 4.6E-36 234.2 21.3 246 1-258 131-414 (423)
50 1d2f_A MALY protein; aminotran 100.0 1.4E-31 4.8E-36 231.6 20.1 239 1-258 118-388 (390)
51 1vp4_A Aminotransferase, putat 100.0 5E-32 1.7E-36 237.2 17.0 242 1-258 140-417 (425)
52 2gb3_A Aspartate aminotransfer 100.0 2.7E-31 9.3E-36 231.4 21.3 238 1-258 133-401 (409)
53 3ffh_A Histidinol-phosphate am 100.0 1.2E-30 4.1E-35 223.6 23.3 230 1-256 115-363 (363)
54 3euc_A Histidinol-phosphate am 100.0 2.7E-31 9.4E-36 227.9 19.3 230 1-257 116-366 (367)
55 3get_A Histidinol-phosphate am 100.0 6.4E-31 2.2E-35 225.4 20.4 230 1-257 113-365 (365)
56 3p1t_A Putative histidinol-pho 100.0 1.2E-30 4.1E-35 221.2 21.4 227 1-258 97-336 (337)
57 2x5f_A Aspartate_tyrosine_phen 100.0 3.4E-31 1.2E-35 232.1 18.1 239 1-258 144-428 (430)
58 3ly1_A Putative histidinol-pho 100.0 1.3E-30 4.3E-35 222.6 21.1 230 1-258 99-351 (354)
59 2zyj_A Alpha-aminodipate amino 100.0 2E-31 6.7E-36 231.3 16.2 238 1-258 122-392 (397)
60 3asa_A LL-diaminopimelate amin 100.0 5.8E-31 2E-35 228.7 18.4 236 1-258 125-392 (400)
61 3rq1_A Aminotransferase class 100.0 5.4E-31 1.9E-35 230.0 17.9 235 1-258 133-414 (418)
62 3if2_A Aminotransferase; YP_26 100.0 1.2E-30 4.2E-35 229.4 20.0 242 1-258 152-439 (444)
63 4eu1_A Mitochondrial aspartate 100.0 3E-31 1E-35 231.0 14.5 235 1-257 138-409 (409)
64 2zc0_A Alanine glyoxylate tran 100.0 1.6E-30 5.6E-35 226.0 18.6 240 1-258 129-403 (407)
65 3ftb_A Histidinol-phosphate am 100.0 2.5E-30 8.7E-35 221.2 19.1 231 1-256 105-358 (361)
66 3t18_A Aminotransferase class 100.0 1.9E-30 6.5E-35 226.2 17.4 231 1-257 132-408 (413)
67 7aat_A Aspartate aminotransfer 100.0 2.5E-30 8.4E-35 224.6 17.1 235 1-257 130-401 (401)
68 3b1d_A Betac-S lyase; HET: PLP 99.9 5.1E-33 1.7E-37 241.0 0.0 240 1-258 120-392 (392)
69 1lc5_A COBD, L-threonine-O-3-p 100.0 6.7E-30 2.3E-34 219.2 19.4 232 1-257 105-358 (364)
70 4f4e_A Aromatic-amino-acid ami 100.0 7.2E-31 2.5E-35 229.5 12.6 235 1-257 150-420 (420)
71 3meb_A Aspartate aminotransfer 100.0 1E-30 3.5E-35 230.5 13.5 242 1-258 152-443 (448)
72 4h51_A Aspartate aminotransfer 100.0 6.6E-30 2.3E-34 222.6 17.8 235 1-258 144-416 (420)
73 3cq5_A Histidinol-phosphate am 100.0 1.1E-29 3.8E-34 218.3 19.0 228 1-258 123-367 (369)
74 3fsl_A Aromatic-amino-acid ami 100.0 1.3E-30 4.5E-35 225.8 12.4 234 1-256 128-397 (397)
75 3hdo_A Histidinol-phosphate am 100.0 2.2E-29 7.5E-34 215.7 19.5 229 1-257 113-353 (360)
76 3fkd_A L-threonine-O-3-phospha 100.0 3.3E-29 1.1E-33 213.7 20.4 231 1-258 96-341 (350)
77 1ajs_A Aspartate aminotransfer 100.0 2E-30 6.9E-35 225.9 11.6 235 1-258 137-410 (412)
78 1uu1_A Histidinol-phosphate am 100.0 8.2E-29 2.8E-33 210.2 20.1 217 2-255 104-334 (335)
79 1yaa_A Aspartate aminotransfer 100.0 7.5E-30 2.6E-34 222.4 11.3 234 1-257 131-409 (412)
80 2q7w_A Aspartate aminotransfer 100.0 6.6E-30 2.3E-34 221.3 9.3 234 1-256 127-396 (396)
81 2ay1_A Aroat, aromatic amino a 100.0 6.8E-29 2.3E-33 214.9 10.2 233 1-255 124-392 (394)
82 3a2b_A Serine palmitoyltransfe 99.9 3.4E-27 1.2E-31 204.6 17.2 233 1-258 134-391 (398)
83 1e5e_A MGL, methionine gamma-l 99.9 1.6E-26 5.4E-31 201.2 17.8 238 1-257 108-393 (404)
84 2dr1_A PH1308 protein, 386AA l 99.9 2.2E-25 7.7E-30 191.9 21.2 236 1-258 102-378 (386)
85 1vjo_A Alanine--glyoxylate ami 99.9 3.2E-26 1.1E-30 198.0 15.8 235 1-257 116-393 (393)
86 3tqx_A 2-amino-3-ketobutyrate 99.9 6.6E-26 2.2E-30 196.2 16.4 235 1-258 134-395 (399)
87 1eg5_A Aminotransferase; PLP-d 99.9 3.8E-26 1.3E-30 196.5 14.7 235 1-258 96-375 (384)
88 1fc4_A 2-amino-3-ketobutyrate 99.9 1.5E-25 5.2E-30 194.3 17.9 233 1-258 136-396 (401)
89 2bwn_A 5-aminolevulinate synth 99.9 4.6E-25 1.6E-29 191.3 17.8 235 1-258 139-399 (401)
90 1t3i_A Probable cysteine desul 99.9 4.3E-25 1.5E-29 192.2 16.8 235 1-257 125-411 (420)
91 1kmj_A Selenocysteine lyase; p 99.9 6E-25 2.1E-29 190.3 16.9 235 1-257 120-403 (406)
92 1bs0_A Protein (8-amino-7-oxon 99.9 5.5E-25 1.9E-29 189.7 15.1 232 1-255 130-383 (384)
93 1ibj_A CBL, cystathionine beta 99.9 4.3E-24 1.5E-28 188.7 20.2 243 1-258 178-461 (464)
94 2w8t_A SPT, serine palmitoyltr 99.9 9.2E-25 3.2E-29 191.3 15.5 234 1-258 155-414 (427)
95 3zrp_A Serine-pyruvate aminotr 99.9 4.7E-24 1.6E-28 183.4 18.9 233 2-258 85-362 (384)
96 2aeu_A Hypothetical protein MJ 99.9 2.2E-24 7.4E-29 185.8 16.3 237 1-257 105-369 (374)
97 1iug_A Putative aspartate amin 99.9 1.5E-23 5E-28 178.3 18.5 230 2-258 83-347 (352)
98 1elu_A L-cysteine/L-cystine C- 99.9 4.5E-24 1.6E-28 184.0 15.5 231 1-255 108-388 (390)
99 3ffr_A Phosphoserine aminotran 99.9 3.3E-23 1.1E-27 176.7 20.5 224 10-256 101-361 (362)
100 4eb5_A Probable cysteine desul 99.9 4.8E-24 1.7E-28 183.3 14.8 232 1-257 95-371 (382)
101 1m32_A 2-aminoethylphosphonate 99.9 7.2E-24 2.5E-28 181.0 15.2 232 2-258 89-364 (366)
102 2rfv_A Methionine gamma-lyase; 99.9 3.9E-23 1.3E-27 179.3 19.6 240 1-254 110-395 (398)
103 2yrr_A Aminotransferase, class 99.9 4.5E-24 1.5E-28 181.4 13.3 234 2-258 82-352 (353)
104 2huf_A Alanine glyoxylate amin 99.9 1.7E-23 5.9E-28 180.7 17.0 234 2-258 102-382 (393)
105 4adb_A Succinylornithine trans 99.9 1.4E-23 4.9E-28 182.0 16.6 230 1-258 135-399 (406)
106 3ruy_A Ornithine aminotransfer 99.9 6.1E-24 2.1E-28 183.7 14.1 207 24-257 171-392 (392)
107 4hvk_A Probable cysteine desul 99.9 9E-24 3.1E-28 181.3 14.9 232 1-257 95-371 (382)
108 2ch1_A 3-hydroxykynurenine tra 99.9 1.7E-23 5.8E-28 180.9 16.3 235 1-257 100-381 (396)
109 3lvm_A Cysteine desulfurase; s 99.9 6.1E-24 2.1E-28 185.4 13.1 233 1-257 120-397 (423)
110 2eh6_A Acoat, acetylornithine 99.9 1.8E-23 6.1E-28 179.6 15.8 221 1-256 124-375 (375)
111 1pff_A Methionine gamma-lyase; 99.9 5.3E-23 1.8E-27 173.9 17.6 239 1-255 44-330 (331)
112 3f9t_A TDC, L-tyrosine decarbo 99.9 1.2E-23 4.1E-28 181.4 13.5 229 1-258 130-397 (397)
113 3cog_A Cystathionine gamma-lya 99.9 2.1E-22 7.2E-27 175.1 21.2 242 1-257 112-400 (403)
114 3kki_A CAI-1 autoinducer synth 99.9 6.9E-24 2.4E-28 184.5 11.8 232 1-258 150-403 (409)
115 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 7.5E-25 2.6E-29 187.7 5.2 230 1-258 100-369 (371)
116 1w23_A Phosphoserine aminotran 99.9 3.2E-23 1.1E-27 177.0 15.3 212 23-258 128-359 (360)
117 3nnk_A Ureidoglycine-glyoxylat 99.9 7.6E-23 2.6E-27 177.6 17.8 233 2-258 96-389 (411)
118 3cai_A Possible aminotransfera 99.9 4.9E-23 1.7E-27 178.7 16.6 236 1-255 120-405 (406)
119 3kgw_A Alanine-glyoxylate amin 99.9 6.5E-23 2.2E-27 176.8 17.2 232 8-258 114-387 (393)
120 2dkj_A Serine hydroxymethyltra 99.9 1.2E-22 4.1E-27 176.2 18.8 236 1-258 116-387 (407)
121 2ord_A Acoat, acetylornithine 99.9 7.8E-24 2.7E-28 183.4 10.7 207 23-258 171-396 (397)
122 2z9v_A Aspartate aminotransfer 99.9 1E-22 3.4E-27 175.8 17.4 233 2-258 91-370 (392)
123 3vax_A Putative uncharacterize 99.9 1.1E-23 3.7E-28 182.4 10.7 234 1-258 116-399 (400)
124 3isl_A Purine catabolism prote 99.9 2.3E-22 7.9E-27 174.8 18.6 233 2-258 94-389 (416)
125 1cs1_A CGS, protein (cystathio 99.9 4.9E-22 1.7E-26 171.7 20.4 244 1-255 98-383 (386)
126 1sff_A 4-aminobutyrate aminotr 99.9 2.4E-23 8.3E-28 181.8 11.7 213 23-258 182-423 (426)
127 2bkw_A Alanine-glyoxylate amin 99.9 1.7E-22 5.7E-27 173.9 16.6 226 9-258 103-383 (385)
128 3ndn_A O-succinylhomoserine su 99.9 3.1E-22 1.1E-26 174.5 17.2 242 1-256 127-413 (414)
129 3qhx_A Cystathionine gamma-syn 99.9 7.1E-22 2.4E-26 171.2 19.1 244 1-256 112-391 (392)
130 3acz_A Methionine gamma-lyase; 99.9 9.2E-22 3.1E-26 170.3 19.7 242 1-257 105-387 (389)
131 3i4j_A Aminotransferase, class 99.9 1.6E-22 5.4E-27 177.1 14.5 215 24-258 175-427 (430)
132 3nx3_A Acoat, acetylornithine 99.9 2.2E-22 7.5E-27 174.2 15.3 211 24-258 168-394 (395)
133 3lws_A Aromatic amino acid bet 99.9 2.6E-22 9E-27 171.3 14.5 207 21-257 123-357 (357)
134 1qgn_A Protein (cystathionine 99.9 3.9E-21 1.3E-25 168.7 21.5 243 2-258 161-444 (445)
135 1vef_A Acetylornithine/acetyl- 99.9 4E-22 1.4E-26 172.5 15.0 206 23-257 173-395 (395)
136 3f0h_A Aminotransferase; RER07 99.9 1.3E-21 4.4E-26 168.0 16.7 215 20-258 129-373 (376)
137 1gc0_A Methionine gamma-lyase; 99.9 2E-21 6.7E-26 168.6 17.9 242 1-255 111-397 (398)
138 2pb2_A Acetylornithine/succiny 99.9 1.4E-21 4.6E-26 170.8 16.0 209 23-258 189-417 (420)
139 3pj0_A LMO0305 protein; struct 99.9 1.1E-21 3.9E-26 167.4 13.8 211 20-256 123-359 (359)
140 3dxv_A Alpha-amino-epsilon-cap 99.9 9.6E-22 3.3E-26 172.5 13.0 209 24-258 186-424 (439)
141 4ffc_A 4-aminobutyrate aminotr 99.9 6.8E-22 2.3E-26 174.4 11.5 211 26-258 215-448 (453)
142 2c0r_A PSAT, phosphoserine ami 99.9 2.2E-21 7.4E-26 166.0 14.1 204 32-258 139-360 (362)
143 3ecd_A Serine hydroxymethyltra 99.9 1.3E-20 4.4E-25 164.2 18.4 216 21-258 157-396 (425)
144 2fyf_A PSAT, phosphoserine ami 99.9 2E-20 7E-25 162.1 19.5 206 32-258 162-397 (398)
145 1n8p_A Cystathionine gamma-lya 99.9 2.8E-21 9.5E-26 167.5 13.9 234 10-255 113-391 (393)
146 3n5m_A Adenosylmethionine-8-am 99.9 2.3E-21 7.9E-26 170.8 13.4 214 25-258 201-451 (452)
147 1zod_A DGD, 2,2-dialkylglycine 99.9 1E-21 3.4E-26 172.1 10.9 214 24-258 188-431 (433)
148 1qz9_A Kynureninase; kynurenin 99.9 2.8E-21 9.6E-26 168.1 13.7 216 15-258 146-401 (416)
149 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.1E-20 3.7E-25 166.6 16.2 232 2-258 120-430 (456)
150 1jg8_A L-ALLO-threonine aldola 99.9 5.2E-21 1.8E-25 162.5 13.6 225 1-258 84-345 (347)
151 1v72_A Aldolase; PLP-dependent 99.9 1.6E-20 5.6E-25 159.7 16.5 226 2-258 91-352 (356)
152 3gju_A Putative aminotransfera 99.9 1.3E-20 4.4E-25 166.5 16.4 211 25-258 207-455 (460)
153 2cb1_A O-acetyl homoserine sul 99.9 3.9E-20 1.3E-24 161.2 19.1 242 1-254 102-411 (412)
154 1wyu_B Glycine dehydrogenase s 99.8 3.9E-21 1.3E-25 170.5 12.4 236 1-257 163-439 (474)
155 1s0a_A Adenosylmethionine-8-am 99.8 1.4E-20 4.7E-25 164.7 15.7 207 22-258 188-423 (429)
156 3mad_A Sphingosine-1-phosphate 99.8 2.4E-20 8.3E-25 166.9 17.7 230 1-257 199-467 (514)
157 3mc6_A Sphingosine-1-phosphate 99.8 8.5E-20 2.9E-24 162.6 19.9 231 1-257 165-435 (497)
158 2fq6_A Cystathionine beta-lyas 99.8 1.3E-19 4.4E-24 157.9 20.3 242 2-254 129-413 (415)
159 2oga_A Transaminase; PLP-depen 99.8 3.5E-20 1.2E-24 160.7 16.4 231 1-258 110-395 (399)
160 1b9h_A AHBA synthase, protein 99.8 2.2E-20 7.4E-25 161.2 14.6 237 1-258 85-387 (388)
161 3oks_A 4-aminobutyrate transam 99.8 1.5E-20 5.1E-25 165.7 12.8 204 33-258 224-450 (451)
162 3l44_A Glutamate-1-semialdehyd 99.8 1.6E-20 5.4E-25 164.6 12.4 210 24-258 188-429 (434)
163 2vi8_A Serine hydroxymethyltra 99.8 2.7E-19 9.1E-24 155.0 19.2 215 20-258 147-386 (405)
164 2eo5_A 419AA long hypothetical 99.8 1E-20 3.6E-25 165.1 9.2 196 24-258 195-417 (419)
165 4a6r_A Omega transaminase; tra 99.8 8.6E-20 2.9E-24 161.2 14.8 205 25-258 205-448 (459)
166 2oat_A Ornithine aminotransfer 99.8 9.4E-20 3.2E-24 160.1 14.8 206 23-258 210-438 (439)
167 3a9z_A Selenocysteine lyase; P 99.8 1.9E-20 6.6E-25 163.7 10.4 219 21-257 161-426 (432)
168 1z7d_A Ornithine aminotransfer 99.8 5.9E-20 2E-24 161.1 13.4 208 23-258 199-428 (433)
169 3n0l_A Serine hydroxymethyltra 99.8 1.3E-18 4.3E-23 151.3 21.6 215 21-258 149-388 (417)
170 3gbx_A Serine hydroxymethyltra 99.8 6.3E-19 2.1E-23 153.3 19.3 214 21-258 154-395 (420)
171 3nmy_A Xometc, cystathionine g 99.8 1.6E-19 5.3E-24 156.7 15.1 229 14-256 130-396 (400)
172 1ax4_A Tryptophanase; tryptoph 99.8 8.8E-20 3E-24 161.2 13.5 232 2-257 130-439 (467)
173 1mdo_A ARNB aminotransferase; 99.8 5.6E-19 1.9E-23 152.5 17.8 234 1-257 86-384 (393)
174 3dod_A Adenosylmethionine-8-am 99.8 3.7E-20 1.3E-24 163.0 10.4 209 24-258 196-442 (448)
175 3ri6_A O-acetylhomoserine sulf 99.8 4.8E-19 1.6E-23 154.9 17.3 242 1-256 128-429 (430)
176 3tfu_A Adenosylmethionine-8-am 99.8 6.6E-19 2.3E-23 155.4 17.9 207 23-258 218-452 (457)
177 1svv_A Threonine aldolase; str 99.8 3.1E-20 1.1E-24 158.0 8.6 227 1-258 97-357 (359)
178 2po3_A 4-dehydrase; external a 99.8 1.9E-18 6.5E-23 150.9 20.0 228 1-257 97-384 (424)
179 3h7f_A Serine hydroxymethyltra 99.8 8.8E-19 3E-23 154.2 17.9 216 21-258 170-413 (447)
180 3fq8_A Glutamate-1-semialdehyd 99.8 7.7E-20 2.6E-24 159.9 10.1 211 24-258 185-426 (427)
181 3e9k_A Kynureninase; kynurenin 99.8 7.4E-20 2.5E-24 161.7 9.7 232 1-258 162-460 (465)
182 1rv3_A Serine hydroxymethyltra 99.8 1.9E-18 6.4E-23 153.5 18.7 213 21-258 178-430 (483)
183 4e77_A Glutamate-1-semialdehyd 99.8 2.2E-19 7.4E-24 157.1 12.2 209 24-258 186-428 (429)
184 3uwc_A Nucleotide-sugar aminot 99.8 7.4E-19 2.5E-23 150.7 14.7 231 1-258 85-370 (374)
185 3k28_A Glutamate-1-semialdehyd 99.8 7.8E-20 2.7E-24 160.0 7.9 209 24-258 186-426 (429)
186 3a8u_X Omega-amino acid--pyruv 99.8 1.7E-18 5.7E-23 152.4 15.2 203 25-258 205-446 (449)
187 3hmu_A Aminotransferase, class 99.8 2.4E-18 8.1E-23 152.5 15.9 206 25-258 209-451 (472)
188 2fnu_A Aminotransferase; prote 99.8 1.3E-17 4.3E-22 142.9 19.3 228 1-258 81-371 (375)
189 3dr4_A Putative perosamine syn 99.8 9.1E-18 3.1E-22 144.9 18.3 232 1-257 103-391 (391)
190 3i5t_A Aminotransferase; pyrid 99.8 3.3E-18 1.1E-22 151.7 15.5 204 25-257 207-452 (476)
191 2dgk_A GAD-beta, GADB, glutama 99.8 2.9E-18 9.8E-23 151.1 14.6 233 3-257 148-432 (452)
192 2e7u_A Glutamate-1-semialdehyd 99.8 2.4E-19 8.3E-24 156.6 6.6 206 23-256 184-424 (424)
193 2c81_A Glutamine-2-deoxy-scyll 99.8 3.5E-17 1.2E-21 142.6 19.7 230 1-258 89-413 (418)
194 2epj_A Glutamate-1-semialdehyd 99.8 1.4E-19 4.8E-24 158.6 4.5 211 23-258 188-430 (434)
195 2z67_A O-phosphoseryl-tRNA(SEC 99.8 7.3E-18 2.5E-22 148.7 14.0 232 1-256 183-455 (456)
196 2cy8_A D-phgat, D-phenylglycin 99.8 5E-19 1.7E-23 155.9 5.9 204 23-257 186-433 (453)
197 3nyt_A Aminotransferase WBPE; 99.7 6.5E-17 2.2E-21 138.5 17.6 229 1-255 82-360 (367)
198 1js3_A DDC;, DOPA decarboxylas 99.7 1.5E-17 5.2E-22 147.8 13.9 234 1-257 189-472 (486)
199 3hbx_A GAD 1, glutamate decarb 99.7 3.6E-17 1.2E-21 145.9 16.2 236 1-257 161-442 (502)
200 3frk_A QDTB; aminotransferase, 99.7 2.4E-17 8.4E-22 141.4 14.1 232 1-257 83-366 (373)
201 2ctz_A O-acetyl-L-homoserine s 99.7 3.1E-17 1E-21 143.3 12.5 241 2-256 105-420 (421)
202 2okj_A Glutamate decarboxylase 99.7 6.2E-17 2.1E-21 144.5 14.5 236 2-258 197-501 (504)
203 2oqx_A Tryptophanase; lyase, p 99.7 2E-17 6.8E-22 146.1 11.1 210 21-257 165-440 (467)
204 2cjg_A L-lysine-epsilon aminot 99.7 3E-17 1E-21 144.5 12.0 200 28-258 221-447 (449)
205 3ke3_A Putative serine-pyruvat 99.7 1.1E-16 3.7E-21 137.9 13.6 217 22-258 121-375 (379)
206 2x3l_A ORN/Lys/Arg decarboxyla 99.7 1.1E-16 3.6E-21 140.9 12.9 220 1-257 103-351 (446)
207 2qma_A Diaminobutyrate-pyruvat 99.7 1.7E-16 5.7E-21 141.5 12.3 234 2-258 210-495 (497)
208 2yky_A Beta-transaminase; tran 99.5 2.2E-18 7.6E-23 151.7 0.0 208 23-258 218-459 (465)
209 1o69_A Aminotransferase; struc 99.7 1.2E-15 4.2E-20 131.8 16.7 232 1-258 79-386 (394)
210 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 4.8E-15 1.7E-19 129.9 20.6 241 1-258 117-435 (437)
211 1wyu_A Glycine dehydrogenase ( 99.7 6.8E-16 2.3E-20 135.4 15.0 226 1-256 157-437 (438)
212 2a7v_A Serine hydroxymethyltra 99.7 5.6E-15 1.9E-19 130.8 18.9 214 21-257 188-439 (490)
213 3ju7_A Putative PLP-dependent 99.7 6.6E-16 2.3E-20 132.9 12.6 234 1-257 85-373 (377)
214 3jzl_A Putative cystathionine 99.6 6.3E-15 2.2E-19 127.9 17.0 161 2-172 110-302 (409)
215 3hvy_A Cystathionine beta-lyas 99.6 6.5E-15 2.2E-19 128.4 16.5 161 2-172 125-319 (427)
216 3i16_A Aluminum resistance pro 99.6 6.6E-15 2.3E-19 128.3 15.5 141 22-172 161-319 (427)
217 3vp6_A Glutamate decarboxylase 99.6 5.4E-15 1.8E-19 132.1 14.5 234 2-257 200-503 (511)
218 1ohv_A 4-aminobutyrate aminotr 99.6 1.1E-15 3.8E-20 135.3 9.6 205 24-258 241-470 (472)
219 2jis_A Cysteine sulfinic acid 99.6 7.4E-15 2.5E-19 131.4 14.7 236 2-258 211-514 (515)
220 3b8x_A WBDK, pyridoxamine 5-ph 99.6 1.2E-13 4.2E-18 119.0 18.4 227 1-252 87-389 (390)
221 4e1o_A HDC, histidine decarbox 99.6 2.5E-14 8.5E-19 126.9 13.1 232 2-257 196-476 (481)
222 3k40_A Aromatic-L-amino-acid d 99.6 2.9E-14 9.8E-19 126.3 12.9 232 2-257 190-469 (475)
223 1c4k_A Protein (ornithine deca 99.6 5E-13 1.7E-17 123.5 21.0 244 2-257 221-564 (730)
224 3e77_A Phosphoserine aminotran 99.5 2.2E-13 7.7E-18 116.7 13.0 216 22-258 139-374 (377)
225 3m5u_A Phosphoserine aminotran 99.5 1.7E-12 5.9E-17 110.7 18.0 209 23-258 131-359 (361)
226 3ht4_A Aluminum resistance pro 99.5 2.2E-13 7.5E-18 119.1 12.2 161 2-172 116-308 (431)
227 2vyc_A Biodegradative arginine 99.4 4E-12 1.4E-16 118.2 18.6 241 1-256 252-602 (755)
228 3qm2_A Phosphoserine aminotran 99.4 1.6E-11 5.4E-16 105.7 15.2 209 23-258 154-384 (386)
229 4a0g_A Adenosylmethionine-8-am 99.3 7E-12 2.4E-16 117.5 9.4 198 35-258 594-827 (831)
230 4atq_A 4-aminobutyrate transam 99.2 1.7E-10 5.8E-15 101.3 12.6 202 35-258 226-454 (456)
231 4ao9_A Beta-phenylalanine amin 99.2 1.4E-10 4.8E-15 101.6 10.4 204 23-258 205-445 (454)
232 3n75_A LDC, lysine decarboxyla 99.1 8E-09 2.7E-13 95.0 18.2 161 2-172 243-443 (715)
233 4e3q_A Pyruvate transaminase; 99.0 4.9E-09 1.7E-13 92.4 14.1 175 54-258 264-467 (473)
234 3ou5_A Serine hydroxymethyltra 98.9 9.5E-08 3.3E-12 82.4 17.3 213 21-256 188-438 (490)
235 3hl2_A O-phosphoseryl-tRNA(SEC 98.7 4.7E-07 1.6E-11 78.4 14.8 219 21-257 198-459 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 98.2 2.2E-05 7.7E-10 68.3 13.4 144 21-172 180-338 (450)
237 2gjh_A Designed protein; oblig 33.9 65 0.0022 18.1 4.0 26 232-257 2-28 (62)
238 2kfp_A Pspto_3016 protein; alp 30.0 1.3E+02 0.0046 20.5 5.9 47 207-256 68-116 (125)
239 1qys_A TOP7; alpha-beta, novel 22.5 1.5E+02 0.005 18.5 4.4 28 230-257 44-72 (106)
240 3m05_A Uncharacterized protein 22.2 1.1E+02 0.0037 20.8 3.8 51 206-256 17-69 (114)
No 1
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=2.3e-38 Score=274.80 Aligned_cols=252 Identities=39% Similarity=0.770 Sum_probs=198.0
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHHHhhcC-CC--cEEEeeccccCCCCCCC
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNKAVLKG-PY--AKSIYDHAYFWPHFAPI 77 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~la~~-~~--~~vi~De~y~~~~~~~~ 77 (259)
+|+|+.|...++..|.++..+.+|.+.++ .++++++++++||||||.++++++++ ++ ++||+||+|+.++...+
T Consensus 126 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~---~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l 202 (391)
T 3bwn_A 126 APFYSTYVEETTYVRSGMYKWEGDAWGFD---KKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPI 202 (391)
T ss_dssp SSCCTHHHHHHHTTCBTTEEEEEESTTCC---CCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCC
T ss_pred CCCchhHHHHHHHcCCeEEEecCCHHHcC---CCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCcc
Confidence 59999999999999998888888877666 35789999999999999999888766 66 99999999964333334
Q ss_pred CCCCCCeEEEeccccccCCCcceEEEEEe-cCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhc-----CCcchHH
Q 024997 78 PAPADEELMIFTISKLTGHAGSRFGWAVI-KDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLED-----GGNNIFE 151 (259)
Q Consensus 78 ~~~~~~~i~~~S~SK~~g~~G~R~G~i~~-~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~-----~~~~~~~ 151 (259)
....+++++++||||+||++|+|+||+++ + +++++.+.........+++.+.|.++..+++...+. ..+.+++
T Consensus 203 ~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 281 (391)
T 3bwn_A 203 TRRQDHDIMLFTFSKITGHAGSRIGWALVKD-KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFK 281 (391)
T ss_dssp CCCBCCSEEEEEHHHHHSCGGGCEEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHH
T ss_pred ccCCCCeEEEEechhhcCCCccceEEEEecC-HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHH
Confidence 33567899999999999999999999998 6 799999998887667889999999999999852100 0256889
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCC
Q 024997 152 FGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
+.++.++++++.+.+.|++++++.+....+...+++....+.+|+|+|++++. .+.+..+++++||.++||+.|+.++
T Consensus 282 ~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~--~~~~~~~l~~~gV~v~pg~~fg~~~ 359 (391)
T 3bwn_A 282 YGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE--ETDLVSELRRHKVMSRAGERCGSDK 359 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS--SCCHHHHHHHTTEECEEGGGGTCCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc--HHHHHHHHHHCCEEEccCCCCCCCC
Confidence 99999999999999999987543322111111222222346788999999974 3567778888999999999998756
Q ss_pred CeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++|||++.+++++++++++|++++++
T Consensus 360 ~~iRis~~~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 360 KHVRVSMLSREDVFNVFLERLANMKLI 386 (391)
T ss_dssp TEEEEESCSCHHHHHHHHHHHHSCC--
T ss_pred CEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 899999988889999999999988764
No 2
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=2.1e-37 Score=271.57 Aligned_cols=256 Identities=48% Similarity=0.940 Sum_probs=209.6
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccccCCCCCCCCC-
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAYFWPHFAPIPA- 79 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y~~~~~~~~~~- 79 (259)
+|+|+.|...++..|.++..|.+|++.|++.+++++++++++|||||||.+++++++ ++..|.|++||++. .++..
T Consensus 162 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~l~--~~~~i~d~~~~~~~-~s~~~~ 238 (427)
T 2hox_A 162 APFYPVFREQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRHAVIK--GCKSIYDMVYYWPH-YTPIKY 238 (427)
T ss_dssp SSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCCCSST--TCEEEEECTTCSTT-TSCCCS
T ss_pred CCCcccHHHHHHHcCCeeeeecCCHHHHHHhhcCCceEEEEcCCCCCcccccHHHHc--CCCEEEeecccCCC-CCcccc
Confidence 599999999999999998889999999999988889999999999999999985554 56788999887522 22221
Q ss_pred CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhc------CCcchHHHH
Q 024997 80 PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLED------GGNNIFEFG 153 (259)
Q Consensus 80 ~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~------~~~~~~~~~ 153 (259)
..+++++++||||.+|++|+|+||++++++++++.+.........+++.+.|.++..+|+...+. ..++++.+.
T Consensus 239 ~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~ 318 (427)
T 2hox_A 239 KADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFG 318 (427)
T ss_dssp CBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHH
T ss_pred CCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHH
Confidence 26789999999999999999999999954799999999888777899999999999998852110 135678888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccc-ccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCC
Q 024997 154 YNTMKKRWENLSKIISLSNRFSLQEIA-PQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEAR 232 (259)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~ 232 (259)
++.++++++.+.+.|++++++.+..+. +.+++++.+..|++|+|+|++++..+.+++..+++++||.++||..|+.+++
T Consensus 319 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 398 (427)
T 2hox_A 319 FKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSR 398 (427)
T ss_dssp HHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTT
T ss_pred HHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCC
Confidence 999999999999999987654432122 3344445667899999999999753456677778889999999999986568
Q ss_pred eEEEEeecChhhHHHHHHHHHHHhhhC
Q 024997 233 FVRLSLLKSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 233 ~~Ris~~~~~~~~~~~~~~l~~~l~~~ 259 (259)
++|||++.+++++++++++|++++++|
T Consensus 399 ~~Ris~~~~~e~l~~~l~~l~~~~~~~ 425 (427)
T 2hox_A 399 YVRLSLIKTQDDFDQLMYYLKDMVKAK 425 (427)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHhhc
Confidence 999999888899999999999998764
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=4.2e-36 Score=259.84 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=191.9
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .++|+++|++||
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 201 (385)
T 1b5p_A 122 SPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201 (385)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999998887652 356888999999988899999999999999986 278999999999
Q ss_pred eeccc--c--CCCCCCCCC-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPIPA-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
+||+| + .....++.. ..+++++++||||.+|++|+|+||++++ +++++.+.......+.+++.+.|.++.++++
T Consensus 202 ~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 280 (385)
T 1b5p_A 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMASVSRQSTTSPDTIAQWATLEALT 280 (385)
T ss_dssp EECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred EEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHh
Confidence 99999 2 111112211 1178999999999999999999999998 7999999887776677899999999988887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--CchHHHHHHHHHc
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDKDCYGILKAA 217 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~ 217 (259)
.... ...++++.++.++++++.+.+.|++++ +.+..+++++|+|++++. .+.+.+.+.|.++
T Consensus 281 ~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 344 (385)
T 1b5p_A 281 NQEA--SRAFVEMAREAYRRRRDLLLEGLTALG--------------LKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEA 344 (385)
T ss_dssp CHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHT--------------CCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHT
T ss_pred CCCc--chHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCeeEEEEEecCCCCCCHHHHHHHHHHC
Confidence 2000 235688889999999999999998763 444578889999999863 2333344444488
Q ss_pred CeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
||.++||..|+. ++++|||++.+++++++++++|.+++++
T Consensus 345 gv~v~~g~~f~~-~~~iRis~~~~~~~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 345 GVAVVPGTDFAA-FGHVRLSYATSEENLRKALERFARVLGR 384 (385)
T ss_dssp TEECEESGGGTC-TTEEEEECCSCHHHHHHHHHHGGGGC--
T ss_pred CeEEecccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 999999999976 5899999988899999999999988764
No 4
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.2e-34 Score=252.21 Aligned_cols=244 Identities=16% Similarity=0.145 Sum_probs=193.7
Q ss_pred CCCcccchhhhhhccCcccc-----cccChhhhcccCC------------CCceEEEE-cCCCCCChhhHH--------H
Q 024997 1 MPFYPLYQEQTDYFESVDYK-----FEGEANLWGNASS------------DTHLVEFV-TAPNNPDGQMNK--------A 54 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~-----~~~d~~~l~~~~~------------~~~~~i~i-~~p~NPtG~~~~--------~ 54 (259)
+|+|+.|...++..|.++.. .++|+++|++.++ ++++++++ ++||||||.+++ +
T Consensus 139 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 218 (425)
T 2r2n_A 139 EPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE 218 (425)
T ss_dssp SSCCHHHHHHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 59999999999988887633 3467888888775 35777655 689999999982 7
Q ss_pred hhcCCCcEEEeeccc----cCC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCC
Q 024997 55 VLKGPYAKSIYDHAY----FWP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVS 127 (259)
Q Consensus 55 la~~~~~~vi~De~y----~~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~ 127 (259)
+|+++|++||+||+| |.. ...++. +..+++++++||||.++ +|+|+||++++ +++++.+.......+.+++
T Consensus 219 ~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~~ 296 (425)
T 2r2n_A 219 LARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP-KPLIERVILHIQVSTLHPS 296 (425)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE-HHHHHHHHHHHHTTTCSSC
T ss_pred HHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC-HHHHHHHHHHHHHhcCCCC
Confidence 899999999999999 322 222222 33568999999999998 99999999999 6999999988777778899
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc-CCCccccccccccccceeeCCCCCeeEEEecCCC-
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS-NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE- 205 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (259)
++.|.++.++++...++...+++.+.++.++++++.+.+.|++. +++ ..+..|.+|+|+|++++..
T Consensus 297 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~------------~~~~~p~~g~~~~~~~~~~~ 364 (425)
T 2r2n_A 297 TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGL------------AEWHVPAAGMFLWIKVKGIN 364 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS------------EEECCCSBSSEEEEEETTCS
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------------eEEeCCCceEEEEEEeCCCC
Confidence 99999999999853211234678888999999999999999863 321 1234678999999999763
Q ss_pred c-hHHHHHHHHHcCeeeecCCcccCC----CCeEEEEee-cChhhHHHHHHHHHHHhhh
Q 024997 206 E-DKDCYGILKAAKIIGREGKKFRAE----ARFVRLSLL-KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 ~-~~~~~~ll~~~gi~~~~g~~f~~~----~~~~Ris~~-~~~~~~~~~~~~l~~~l~~ 258 (259)
+ .+++.+.+.++||.++||..|+.+ .+++|||++ .+++++++++++|++++++
T Consensus 365 ~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 365 DVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 2 344567777899999999999742 579999998 5999999999999998864
No 5
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=254.14 Aligned_cols=237 Identities=13% Similarity=0.173 Sum_probs=194.5
Q ss_pred CCCcccchhhhhhccCccc------------------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HH
Q 024997 1 MPFYPLYQEQTDYFESVDY------------------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KA 54 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------------------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~ 54 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++++++++++++||||||.++ .+
T Consensus 149 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 228 (447)
T 3b46_A 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGN 228 (447)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHH
Confidence 4899999999998887641 357899999999988899999999999999986 28
Q ss_pred hhcCCCcEEEeeccc--c--CCCCCCCC----CCCCCeEEEeccccccCCCcceEEEEEe-cCHHHHHHHHHhhhhhcCC
Q 024997 55 VLKGPYAKSIYDHAY--F--WPHFAPIP----APADEELMIFTISKLTGHAGSRFGWAVI-KDEAVYQRMSAYISLNTMG 125 (259)
Q Consensus 55 la~~~~~~vi~De~y--~--~~~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~-~~~~~~~~~~~~~~~~~~~ 125 (259)
+|+++|+++|+||+| + .....++. +..+++++++|+||.+|++|+|+||+++ + +++++.+.......+.+
T Consensus 229 l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~-~~l~~~l~~~~~~~~~~ 307 (447)
T 3b46_A 229 ICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLN-AELLSYAAKAHTRICFA 307 (447)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSC-HHHHHHHHHHHHHHTSS
T ss_pred HHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCC-HHHHHHHHHHHhhccCC
Confidence 899999999999999 2 22222221 1346899999999999999999999999 7 79999998877667788
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 126 VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
++++.|.++.++|+.. ..+.++++.++.++++++.+.+.|++++ +.+..+++|+|+|++++..
T Consensus 308 ~~~~~~~a~~~aL~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~~~~~ 370 (447)
T 3b46_A 308 SPSPLQEACANSINDA---LKIGYFEKMRQEYINKFKIFTSIFDELG--------------LPYTAPEGTYFVLVDFSKV 370 (447)
T ss_dssp CCHHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHHHHT--------------CCEECCSBSSEEEEECTTC
T ss_pred CChHHHHHHHHHHhCC---cchHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCeeEEEEEecccc
Confidence 9999999999898852 1256788899999999999999998764 4455788899999998742
Q ss_pred ----------------c-hHHHHHHHHHcCeeeecCCcccCC------CCeEEEEeecChhhHHHHHHHHHHH
Q 024997 206 ----------------E-DKDCYGILKAAKIIGREGKKFRAE------ARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 206 ----------------~-~~~~~~ll~~~gi~~~~g~~f~~~------~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+ .++...+++++||.+.||..|+.+ ++++|||++.+++++++++++|+++
T Consensus 371 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 371 KIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp CCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred cCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 2 255556777789999999988742 6899999988999999999999874
No 6
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=9.3e-34 Score=248.46 Aligned_cols=239 Identities=15% Similarity=0.180 Sum_probs=195.8
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 149 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i 228 (427)
T 3dyd_A 149 RPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPIL 228 (427)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 4899999999999888652 3567999999999888999999999999999972 88999999999
Q ss_pred eeccc--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecC------HHHHHHHHHhhhhhcCCCCHHHH
Q 024997 65 YDHAY--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKD------EAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~------~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
+||+| | .. ...++. .....+++++|+||.|+++|+|+||+++++ +++++.+...... ..+++++.|
T Consensus 229 ~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~ 307 (427)
T 3dyd_A 229 ADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQ 307 (427)
T ss_dssp EECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHH
T ss_pred EEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHH
Confidence 99999 3 12 122222 234568999999999999999999999985 3688877766543 578899999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-------
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER------- 204 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 204 (259)
.++.++++.. ...++.+.+++++++++.+.+.|+++++ +....|++|+|+|++++.
T Consensus 308 ~a~~~~L~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~p~~g~~~~~~l~~~~~~~~~ 370 (427)
T 3dyd_A 308 GALKSILCRT----PGEFYHNTLSFLKSNADLCYGALAAIPG-------------LRPVRPSGAMYLMVGIEMEHFPEFE 370 (427)
T ss_dssp HHHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHHHHSTT-------------EEEECCSBTTEEEEEECGGGCTTCS
T ss_pred HHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceecCCCeeEEEEEecCHhhcCCCC
Confidence 9999999842 4567888899999999999999987643 556678999999998862
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+++..+++++||.++||..|+. ++++||+++.+++++++++++|.+++++
T Consensus 371 ~~~~~~~~l~~~~gV~v~~g~~~~~-~~~iRis~~~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 371 NDVEFTERLVAEQSVHCLPATCFEY-PNFIRVVITVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp SHHHHHHHHHHHHCEECEEGGGGTC-TTEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCEEEECCcccCC-CCeEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 1346677777789999999998875 4899999988999999999999998764
No 7
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=3.3e-34 Score=248.44 Aligned_cols=235 Identities=16% Similarity=0.159 Sum_probs=194.1
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .++|+++|+++|+
T Consensus 127 ~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 127 NPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4899999999988887652 456788889988877899999999999999997 2788999999999
Q ss_pred eccc--c--CC-CCCCC-------CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHH
Q 024997 66 DHAY--F--WP-HFAPI-------PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLR 133 (259)
Q Consensus 66 De~y--~--~~-~~~~~-------~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 133 (259)
||+| | .. ..... ....+++++++|+||.++++|+|+||++++ +++++.+.......+.+++++.|.+
T Consensus 207 De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a 285 (396)
T 3jtx_A 207 DECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGD-AELLKNFLLYRTYHGSAMSIPVQRA 285 (396)
T ss_dssp ECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEEC-HHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred EccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeC-HHHHHHHHHHHhhcccCCCHHHHHH
Confidence 9999 2 11 11111 113678999999999999999999999998 7999999988877778899999999
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc-hHHHHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYG 212 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 212 (259)
+..+++ .++++.+.+++++++++.+.+.|+++. ....+.+|+|+|++++..+ .++...
T Consensus 286 ~~~~l~------~~~~~~~~~~~~~~~~~~l~~~l~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (396)
T 3jtx_A 286 SIAAWD------DEQHVIDNRRLYQEKFERVIPILQQVF---------------DVKLPDASFYIWLKVPDGDDLAFARN 344 (396)
T ss_dssp HHHHHH------CCHHHHHHHHHHHHHHHHHHHHHTTTS---------------CCCCCSSSSEEEEECTTSCHHHHHHH
T ss_pred HHHHhC------CHHHHHHHHHHHHHHHHHHHHHHHhcC---------------CccCCCeeEEEEEECCCCCHHHHHHH
Confidence 999998 356888899999999999999987531 2346788999999998643 566666
Q ss_pred HHHHcCeeeecCCcccC-------CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 213 ILKAAKIIGREGKKFRA-------EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~-------~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+++++||.+.||..|+. +.+++|||++.+++++++++++|+++++
T Consensus 345 l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 396 (396)
T 3jtx_A 345 LWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLYR 396 (396)
T ss_dssp HHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 76788999999999874 3689999998899999999999998763
No 8
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=5.2e-34 Score=249.24 Aligned_cols=243 Identities=12% Similarity=0.174 Sum_probs=199.3
Q ss_pred CCCcccchhhhhhccCccc------------------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HH
Q 024997 1 MPFYPLYQEQTDYFESVDY------------------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KA 54 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------------------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~ 54 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .+
T Consensus 122 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~ 201 (422)
T 3fvs_A 122 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201 (422)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHH
Confidence 4899999999988887542 235788999999988999999999999999997 27
Q ss_pred hhcCCCcEEEeeccc--c--CC-CCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCC
Q 024997 55 VLKGPYAKSIYDHAY--F--WP-HFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGV 126 (259)
Q Consensus 55 la~~~~~~vi~De~y--~--~~-~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~ 126 (259)
+|+++|+++|+||+| | .. ...+ +....+++++++|+||.+|++|+|+||++++ +++++.+........+++
T Consensus 202 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~ 280 (422)
T 3fvs_A 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGP-DHIMKHLRTVHQNSVFHC 280 (422)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECC-HHHHHHHHHHHHTTTCCC
T ss_pred HHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeC-HHHHHHHHHHHhhccCCC
Confidence 899999999999999 2 22 1222 2233478999999999999999999999999 699999988877677889
Q ss_pred CHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 127 SRECQLRAFKLLKVVLE--DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
+++.|.++..+++.... +..+.++++.++.++++++.+.+.|++++ +....+.+++|+|++++.
T Consensus 281 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~ 346 (422)
T 3fvs_A 281 PTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG--------------LKPIIPQGSYFLITDISD 346 (422)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTT--------------CEEEBCSBSSEEEEECHH
T ss_pred CcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CeecCCCeeeEEEEechh
Confidence 99999999999873100 12456888999999999999999998763 555688999999998864
Q ss_pred C---------------chHHHHHHHHHcCeeeecCCcccC------CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 E---------------EDKDCYGILKAAKIIGREGKKFRA------EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 ~---------------~~~~~~~ll~~~gi~~~~g~~f~~------~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
. +.++...+++++||.+.||+.|+. +.+++|||++.+++++++++++|++++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred hcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 2 226677778889999999999863 46899999988999999999999998864
No 9
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=7.3e-34 Score=247.40 Aligned_cols=238 Identities=23% Similarity=0.299 Sum_probs=194.7
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .++|+++|+++|+
T Consensus 140 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 140 DPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp ESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 4899999999988887652 345788888888877789999999999999987 2789999999999
Q ss_pred eccc--c--CCCCCCCCC---CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 66 DHAY--F--WPHFAPIPA---PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 66 De~y--~--~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
||+| | .....++.. ..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.+++
T Consensus 220 De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l 298 (404)
T 2o1b_A 220 DFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMIQALKKYQTHTNAGMFGALQDAAIYAL 298 (404)
T ss_dssp ECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred EccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 9999 2 111112212 2357899999999999999999999998 799999988877777889999999999999
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c-hHHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E-DKDCYGILKA 216 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ll~~ 216 (259)
+. .+.++++.++.++++++.+.+.|++++ +....+++++|+|++++.. + .++...++++
T Consensus 299 ~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~ 359 (404)
T 2o1b_A 299 NH-----YDDFLEEQSNVFKTRRDRFEAMLAKAD--------------LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQE 359 (404)
T ss_dssp HH-----CHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCEECCCBSSEEEEECCTTCCHHHHHHHHHHH
T ss_pred hc-----CHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CeecCCCcceEEEEeCCCCCCHHHHHHHHHHH
Confidence 84 356788899999999999999998763 4445778899999998742 3 3556666767
Q ss_pred cCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 217 AKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+||.++||..|+. +++++|||++.+++++++++++|++++++
T Consensus 360 ~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 360 KSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp HCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred CCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 8999999999875 46899999988889999999999998865
No 10
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.8e-34 Score=247.65 Aligned_cols=238 Identities=20% Similarity=0.187 Sum_probs=193.0
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++.|++.++++++++++++||||||.++ .++|+++|+++|
T Consensus 130 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 209 (412)
T 2x5d_A 130 NPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVV 209 (412)
T ss_dssp ESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999988887652 344677888888877889999999999999986 278999999999
Q ss_pred eeccc--c---CCCCCCCCC---CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F---WPHFAPIPA---PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~---~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| + +....++.. ..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++..
T Consensus 210 ~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 288 (412)
T 2x5d_A 210 HDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIA 288 (412)
T ss_dssp EECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred EeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHH
Confidence 99999 2 111222221 2467999999999999999999999998 7999999887777778899999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C---c-hHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E---E-DKDCY 211 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~ 211 (259)
+++. .++++++.++.++++++.+.+.|++++ +....+++|+|+|++++. . + .++..
T Consensus 289 ~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 349 (412)
T 2x5d_A 289 ALEG-----DQQCVRDIARQYQQRRDVLVKGLREAG--------------WMVENPKASMYVWAKIPEPYAHLGSLEFAK 349 (412)
T ss_dssp HHHS-----CSHHHHHHHHHHHHHHHHHHHHHHHHT--------------CCCCCCSBSSEEEEECCTTTGGGCHHHHHH
T ss_pred HHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEecCCCeeeEEEEEcCCccCCCCHHHHHH
Confidence 9883 456788899999999999999998763 344567789999999863 2 2 34555
Q ss_pred HHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++||.++||..|+. +++++|||++.+++++++++++|.+++++
T Consensus 350 ~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 350 KLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp HHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 666678999999999874 46899999988999999999999998763
No 11
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=256.04 Aligned_cols=243 Identities=16% Similarity=0.203 Sum_probs=189.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCC-----CceEEEEcCCCCCChhhHH--------HhhcCC
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSD-----THLVEFVTAPNNPDGQMNK--------AVLKGP 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~-----~~~~i~i~~p~NPtG~~~~--------~la~~~ 59 (259)
+|+|+.|...++..|.++. +|.+|+++|++.+++ ++++|+++|||||||.+++ ++|+++
T Consensus 188 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~ 267 (498)
T 3ihj_A 188 IPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE 267 (498)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 4899999999999888652 478899999988854 5899999999999999972 789999
Q ss_pred CcEEEeeccc----cCC--CCCCCCC----------CCCCeEEEecccccc-CCCcceEEEEE---ecCHHHHHHHHHhh
Q 024997 60 YAKSIYDHAY----FWP--HFAPIPA----------PADEELMIFTISKLT-GHAGSRFGWAV---IKDEAVYQRMSAYI 119 (259)
Q Consensus 60 ~~~vi~De~y----~~~--~~~~~~~----------~~~~~i~~~S~SK~~-g~~G~R~G~i~---~~~~~~~~~~~~~~ 119 (259)
|++||+||+| |.. ...++.. ...++++++||||.| |++|+|+||++ .+ +++++.+....
T Consensus 268 ~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~-~~l~~~l~~~~ 346 (498)
T 3ihj_A 268 KLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLH-PEIKGQLVKLL 346 (498)
T ss_dssp TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC-HHHHHHHHHHH
T ss_pred CcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCC-HHHHHHHHHHH
Confidence 9999999999 221 2222221 123478999999999 88999999998 46 79999988776
Q ss_pred hhhcCCCCHHHHHHHHHHHHHHHhc--CCcc---hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC
Q 024997 120 SLNTMGVSRECQLRAFKLLKVVLED--GGNN---IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS 194 (259)
Q Consensus 120 ~~~~~~~~~~~q~~~~~~l~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (259)
. ...+++.+.|.++..+++....+ ..+. +..+.+++++++++.+.+.|+++++ +.+..+++
T Consensus 347 ~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g-------------~~~~~p~g 412 (498)
T 3ihj_A 347 S-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPG-------------IHCNPLQG 412 (498)
T ss_dssp H-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT-------------EECCCCCB
T ss_pred h-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------cEecCCCe
Confidence 5 56788999999888887521000 0112 2456678899999999999987643 56678999
Q ss_pred CeeEEEecCC------------Cc-hHH-HHHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 195 PAYAWVKCER------------EE-DKD-CYGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 195 ~~~~~~~~~~------------~~-~~~-~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++|+|+++.. .+ .++ +.++|+++||.++||+.|+. +++++|++++.+++++++++++|.+++++
T Consensus 413 g~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 413 AMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp SSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 9999987642 12 222 67888889999999999984 46799999987999999999999988763
No 12
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.6e-33 Score=248.42 Aligned_cols=239 Identities=16% Similarity=0.146 Sum_probs=191.1
Q ss_pred CCCcccchhhhhhccCccccc-----ccChhhhcccCC----C--CceEE-EEcCCCCCChhhHH--------HhhcCCC
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-----EGEANLWGNASS----D--THLVE-FVTAPNNPDGQMNK--------AVLKGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-----~~d~~~l~~~~~----~--~~~~i-~i~~p~NPtG~~~~--------~la~~~~ 60 (259)
+|+|+.|...++..|.++..+ ++|+++|++.++ + +++++ ++++||||||.+++ ++|+++|
T Consensus 171 ~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~ 250 (448)
T 3aow_A 171 APTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYD 250 (448)
T ss_dssp ESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcC
Confidence 489999999999888776332 468888988876 5 78886 57899999999872 7899999
Q ss_pred cEEEeecccc----CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHH
Q 024997 61 AKSIYDHAYF----WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLR 133 (259)
Q Consensus 61 ~~vi~De~y~----~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 133 (259)
++||+||+|. .. ...++. +..+++++++||||.++ +|+|+||++++ +++++.+.......+.+++++.|.+
T Consensus 251 ~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a 328 (448)
T 3aow_A 251 FIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVV 328 (448)
T ss_dssp CEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred CEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 9999999992 11 122232 33467999999999999 99999999999 7999999887776678889999999
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc-C-CCccccccccccccceeeCCCCCeeEEEecCCC-ch-HH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS-N-RFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-ED-KD 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 209 (259)
+.++++.. ..++++.+.++.++++++.+.+.|++. + + +.+..|.+|+|+|++++.. +. ++
T Consensus 329 ~~~~L~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g-------------~~~~~p~~g~~~~v~~~~~~~~~~l 392 (448)
T 3aow_A 329 AWRYVDGG---YLEKHIPEIRKFYKPRRDAMLEALEEFMPEG-------------VKWTKPEGGMFIWVTLPDGIDSKKM 392 (448)
T ss_dssp HHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-------------CEECCCSBSSEEEEECSTTCCHHHH
T ss_pred HHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------------eEEeCCCccEEEEEEcCCCCCHHHH
Confidence 99999831 125678888999999999999999863 3 1 4455788899999999752 33 44
Q ss_pred HHHHHHHcCeeeecCCcccC---CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA---EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~---~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
...++ ++||.++||..|+. +++++|||++. +++++++++++|.+++++
T Consensus 393 ~~~l~-~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 393 LERAI-KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp HHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 55555 56999999999964 36899999987 799999999999998764
No 13
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=1.3e-33 Score=245.69 Aligned_cols=240 Identities=14% Similarity=0.180 Sum_probs=196.3
Q ss_pred CCCcccchhhhhhccCccc-----------------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHh
Q 024997 1 MPFYPLYQEQTDYFESVDY-----------------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAV 55 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-----------------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~l 55 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++++++++++++||||||.++ .++
T Consensus 116 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~ 195 (410)
T 3e2y_A 116 VPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADL 195 (410)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHH
Confidence 4899999999988887542 234788999999988999999999999999996 278
Q ss_pred hcCCCcEEEeeccc--c--CC-CCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCC
Q 024997 56 LKGPYAKSIYDHAY--F--WP-HFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVS 127 (259)
Q Consensus 56 a~~~~~~vi~De~y--~--~~-~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~ 127 (259)
|+++|+++|+||+| | .. ...+ +....+++++++|+||.+|++|+|+||++++ +++++.+.......+++++
T Consensus 196 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~ 274 (410)
T 3e2y_A 196 CVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP-AHLIKHLQTVQQNSFYTCA 274 (410)
T ss_dssp HHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC-HHHHHHHHHHHHTTTCCCC
T ss_pred HHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC-HHHHHHHHHHHHhhccCCC
Confidence 99999999999999 2 12 1222 2234578999999999999999999999999 7999999888777778899
Q ss_pred HHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 128 RECQLRAFKLLKVVLE--DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
++.|.++..+++.... +....++++.++.++++++.+.+.|++++ +....+++++|+|+++...
T Consensus 275 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~ 340 (410)
T 3e2y_A 275 TPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVG--------------LKPIVPDGGYFIIADVSSL 340 (410)
T ss_dssp HHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTT--------------CEEEBCSBSSEEEEECGGG
T ss_pred hHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCccEEEEEEchhh
Confidence 9999999999873100 12456788899999999999999998764 5566889999999998652
Q ss_pred c-------------hHHHHHHHHHcCeeeecCCcccC------CCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 206 E-------------DKDCYGILKAAKIIGREGKKFRA------EARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 206 ~-------------~~~~~~ll~~~gi~~~~g~~f~~------~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
. .+++..+++++||.+.||..|+. +.+++|||++.+++++++++++|+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 341 GADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409 (410)
T ss_dssp CCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred hcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHhc
Confidence 1 16677788889999999999964 35899999988999999999999864
No 14
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.7e-33 Score=245.13 Aligned_cols=245 Identities=15% Similarity=0.148 Sum_probs=191.9
Q ss_pred CCCcccchhhhhhccCccccc-----ccChhhhcccCCC-CceEEE-EcCCCCCChhhHH--------Hhhc-CCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-----EGEANLWGNASSD-THLVEF-VTAPNNPDGQMNK--------AVLK-GPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-----~~d~~~l~~~~~~-~~~~i~-i~~p~NPtG~~~~--------~la~-~~~~~vi 64 (259)
+|+|+.|...++..|.++..+ ++|+++|++.+++ ++++++ +++||||||.+++ ++|+ ++|+++|
T Consensus 138 ~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li 217 (422)
T 3d6k_A 138 VPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIV 217 (422)
T ss_dssp ESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEE
T ss_pred CCccHHHHHHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEE
Confidence 489999999999988876433 3788889988865 788877 7899999999982 6788 8999999
Q ss_pred eeccc----cCC---CCCCC------CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH
Q 024997 65 YDHAY----FWP---HFAPI------PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 65 ~De~y----~~~---~~~~~------~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
+||+| |.. ...++ .+..+++++++||||. +++|+|+||++++ +++++.+.......+.+++++.|
T Consensus 218 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q 295 (422)
T 3d6k_A 218 WDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASS-KENIEWYASHANVRGIGPNKLNQ 295 (422)
T ss_dssp EECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHH
T ss_pred EECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHH
Confidence 99999 311 11222 1345789999999999 6799999999999 79999999888877888999999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCY 211 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (259)
.++..+++.. +..+.++++.++.++++++.+.+.|++.- ++. ..+.+..|++|+|+|++++..+.+.+.
T Consensus 296 ~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~l-------~~~--~~~~~~~p~~g~~~~~~~~~~~~~~~~ 364 (422)
T 3d6k_A 296 LAHAQFFGDV--AGLKAHMLKHAASLAPKFERVLEILDSRL-------SEY--GVAKWTSPTGGYFISVDVVPGTASRVV 364 (422)
T ss_dssp HHHHHHHCSH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------GGG--TCEEECCCSBSSCEEEEESTTCHHHHH
T ss_pred HHHHHHHhCc--chHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CcC--CceEEeCCCcceEEEEECCCCCHHHHH
Confidence 9999998731 01235778888899999999988887521 110 013445778999999999764456677
Q ss_pred HHHHHcCeeeec-CCcccC----CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGRE-GKKFRA----EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~-g~~f~~----~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
++++++||.++| |..|.. +.+++|||++. +++++++++++|++++++
T Consensus 365 ~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 365 ELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp HHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 788899999999 555641 35899999985 999999999999988753
No 15
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.4e-33 Score=245.70 Aligned_cols=244 Identities=13% Similarity=0.143 Sum_probs=196.5
Q ss_pred CCCcccchhhhhhccCccc----------------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhh
Q 024997 1 MPFYPLYQEQTDYFESVDY----------------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVL 56 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~----------------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la 56 (259)
+|+|+.|...++..|.++. .|.+|++.|++.++++++++++++||||||.++ .++|
T Consensus 132 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~ 211 (429)
T 1yiz_A 132 EPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLC 211 (429)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHH
Confidence 4899999998888877541 356888999999988899999999999999987 2789
Q ss_pred cCCCcEEEeeccc--c--C-CCCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCH
Q 024997 57 KGPYAKSIYDHAY--F--W-PHFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSR 128 (259)
Q Consensus 57 ~~~~~~vi~De~y--~--~-~~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 128 (259)
+++|+++|+||+| | . ....++. ...+++++++|+||.+|++|+|+||++++ +++++.+.......++++++
T Consensus 212 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~ 290 (429)
T 1yiz_A 212 KKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP-EALLKNLQMVHQNCVYTCAT 290 (429)
T ss_dssp HHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESC-HHHHHHHHHHHHTTTCCCCH
T ss_pred HHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeC-HHHHHHHHHHHhhcccCCCh
Confidence 9999999999999 2 1 1122221 24567999999999999999999999999 79999998877666788999
Q ss_pred HHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-
Q 024997 129 ECQLRAFKLLKVVLE--DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE- 205 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (259)
+.|.++.++++.... +..++++++.++.++++++.+.+.|++++ +....+.+|+|+|++++..
T Consensus 291 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~~~~~~ 356 (429)
T 1yiz_A 291 PIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVG--------------MNPTVPQGGYFMVADWSSLD 356 (429)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHT--------------CEEEECSBSSEEEEECCSSC
T ss_pred HHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CcccCCCcceEEEEEccccc
Confidence 999999999884100 12267888899999999999999998763 4455677899999998753
Q ss_pred ------------c-hHHHHHHHHHcCeeeecCCcccC------CCCeEEEEeecChhhHHHHHHHHHHHhhhC
Q 024997 206 ------------E-DKDCYGILKAAKIIGREGKKFRA------EARFVRLSLLKSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 206 ------------~-~~~~~~ll~~~gi~~~~g~~f~~------~~~~~Ris~~~~~~~~~~~~~~l~~~l~~~ 259 (259)
+ .++...+++++||.++||..|+. +.+++|||++.+++++++++++|+++++++
T Consensus 357 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~ 429 (429)
T 1yiz_A 357 SKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGSS 429 (429)
T ss_dssp TTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCCC
T ss_pred ccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhccCC
Confidence 2 24455566689999999998863 268999999889999999999999988753
No 16
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2.4e-33 Score=242.50 Aligned_cols=238 Identities=17% Similarity=0.207 Sum_probs=193.1
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .++|+++|+++|
T Consensus 118 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li 197 (389)
T 1gd9_A 118 TPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197 (389)
T ss_dssp ESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999988887652 356788999999988889999999999999986 288999999999
Q ss_pred eeccc--c--CCC-CCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 65 YDHAY--F--WPH-FAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 65 ~De~y--~--~~~-~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
+||+| + ... ..++. +..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++..
T Consensus 198 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 276 (389)
T 1gd9_A 198 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP-SWIIERMVKFQMYNATCPVTFIQYAAAK 276 (389)
T ss_dssp EECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHTTTTCSCCHHHHHHHHH
T ss_pred EehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEEC-HHHHHHHHHHHhhhccCCCHHHHHHHHH
Confidence 99999 2 111 22222 22467999999999999999999999999 7999999887776678899999999988
Q ss_pred HHHHHHhcCCcc--hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--Cch-HHHH
Q 024997 137 LLKVVLEDGGNN--IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EED-KDCY 211 (259)
Q Consensus 137 ~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~ 211 (259)
+++. ... ++++.+++++++++.+.+.|++++ +....+++++++|++++. .+. ++..
T Consensus 277 ~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (389)
T 1gd9_A 277 ALKD-----ERSWKAVEEMRKEYDRRRKLVWKRLNEMG--------------LPTVKPKGAFYIFPRIRDTGLTSKKFSE 337 (389)
T ss_dssp HHTC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCCCCCCBTTEECCBCGGGTCCHHHHHH
T ss_pred HHhC-----CCcchHHHHHHHHHHHHHHHHHHHHHHcC--------------CeecCCCeeeEEEEeccCCCCCHHHHHH
Confidence 8873 233 678889999999999999998763 334467788999998863 233 4455
Q ss_pred HHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++||.++||..|+. +++++|||++.+++++++++++|.+++++
T Consensus 338 ~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 338 LMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp HHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 555589999999998874 46899999988999999999999998864
No 17
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.7e-33 Score=242.02 Aligned_cols=234 Identities=15% Similarity=0.177 Sum_probs=191.6
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++++++++++++||||||.++ .++|+++|+++|+
T Consensus 122 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 122 DPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEE
T ss_pred CCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 4899999999988887652 356889999999988899999999999999987 2789999999999
Q ss_pred eccc--c--CC-CCCCCCC---CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 66 DHAY--F--WP-HFAPIPA---PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 66 De~y--~--~~-~~~~~~~---~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
||+| | .. ...++.. ..+++++++|+||.+|++|+|+||++++ +++++.+........++++++.|.++..+
T Consensus 202 De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~ 280 (386)
T 1u08_A 202 DEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP-APISAEIRKVHQYLTFSVNTPAQLALADM 280 (386)
T ss_dssp ECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC-HHHHHHHHHHHHHHTSSCCHHHHHHHHHH
T ss_pred EccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcC-HHHHHHHHHHHHhhccCCChHHHHHHHHH
Confidence 9999 2 11 1222221 3468999999999999999999999999 79999998877766788899999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---c-hHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---E-DKDCYGI 213 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l 213 (259)
++. .+.++++.+++++++++.+.+.|++++ +....+++|+++|++++.. + .++...+
T Consensus 281 l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l 341 (386)
T 1u08_A 281 LRA-----EPEHYLALPDFYRQKRDILVNALNESR--------------LEILPCEGTYFLLVDYSAVSTLDDVEFCQWL 341 (386)
T ss_dssp HHH-----CTHHHHTHHHHHHHHHHHHHHHTTSSS--------------CEECCCCBSSEEEEECTTTCCSCHHHHHHHH
T ss_pred HhC-----CcHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeecCCCceEEEEEecCCCCCCCHHHHHHHH
Confidence 884 356788889999999999999988653 4455677889999999752 3 3455556
Q ss_pred HHHcCeeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHH
Q 024997 214 LKAAKIIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDE 254 (259)
Q Consensus 214 l~~~gi~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~ 254 (259)
++++||.++||..|+. +++++|||++.+++++++++++|++
T Consensus 342 ~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 342 TQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp HHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred HHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 6678999999998863 4689999998899999999999865
No 18
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=2.1e-33 Score=243.19 Aligned_cols=235 Identities=19% Similarity=0.231 Sum_probs=193.0
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++. +++++++++||||||.+++ ++|+++|+++|
T Consensus 122 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 198 (391)
T 3h14_A 122 APGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFI 198 (391)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999998888752 355688888776 7888899999999999872 78999999999
Q ss_pred eeccc--c--CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 65 YDHAY--F--WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
+||+| | ...........+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.++++
T Consensus 199 ~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~- 276 (391)
T 3h14_A 199 SDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVP-EDQVRVVERIAQNMFICAPHASQVAALAALD- 276 (391)
T ss_dssp EECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECC-GGGHHHHHHHHHHTTCCCCHHHHHHHHHHTT-
T ss_pred EECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHhC-
Confidence 99999 2 2222222234578999999999999999999999999 5999999888887788899999998888886
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--c-hHHHHHHHHHc
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--E-DKDCYGILKAA 217 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ll~~~ 217 (259)
..+++.+.+++++++++.+.+.|++++. .....+.+++++|++++.. + .++...+++++
T Consensus 277 -----~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (391)
T 3h14_A 277 -----CDAELQANLDVYKANRKLMLERLPKAGF-------------TRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKA 338 (391)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHTC-------------CCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHH
T ss_pred -----ChHHHHHHHHHHHHHHHHHHHHHHHcCC-------------CcccCCCeeEEEEEecCccCCCHHHHHHHHHHHC
Confidence 3467888999999999999999987652 2224677889999998742 3 45566667767
Q ss_pred CeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
||.++||..|+. +++++|||++.+++++++++++|++++++
T Consensus 339 gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 339 GVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp CEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 999999999986 36899999988899999999999999875
No 19
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=2.3e-33 Score=241.53 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=196.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.+...++..|.++. +|.+|+++|++.+++++++|++++||||||.+++ ++|+++|+++|
T Consensus 112 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li 191 (375)
T 3op7_A 112 YPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYIL 191 (375)
T ss_dssp ESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4889999998888887652 3557999999999889999999999999999972 78999999999
Q ss_pred eeccc--cCC-CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 65 YDHAY--FWP-HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 65 ~De~y--~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
+||+| +.. ....+.+..+++++++||||.+|++|+|+||++++ +++++.+.......+.+++++.|.++..+++.
T Consensus 192 ~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 269 (375)
T 3op7_A 192 SDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAAN-HQVTDILRDYRDYTMICAGVFDDLVAQLALAH- 269 (375)
T ss_dssp EECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECC-HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT-
T ss_pred EEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeC-HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc-
Confidence 99999 211 11111134577899999999999999999999998 79999999888777788899999999888873
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCe
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKI 219 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi 219 (259)
.+.++++.++.++++++.+.+.|++.++ +....+.++++.|+.++.. ..+++..+++++||
T Consensus 270 ----~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 332 (375)
T 3op7_A 270 ----YQEILERNRHILEENLAILDQWIEEEPL-------------VSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGV 332 (375)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHCTT-------------EEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCE
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------ceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCE
Confidence 4557788888899999999999987553 4556788888888887643 34666777788999
Q ss_pred eeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 220 IGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 220 ~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.++||..|+. ++++|++++.+.+++++++++|.+++++
T Consensus 333 ~v~~g~~~~~-~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 333 LLVPGNRFER-DGYVRLGFACEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp ECEEGGGGTC-TTEEEECCCSCHHHHHHHHHHHHHHHGG
T ss_pred EEeChhhhCC-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999998886 5899999988779999999999998764
No 20
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.9e-33 Score=241.72 Aligned_cols=239 Identities=17% Similarity=0.223 Sum_probs=194.8
Q ss_pred CCCcccchhhhhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhH----HHhhcCCCcEEEeeccc--c--CC
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN----KAVLKGPYAKSIYDHAY--F--WP 72 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~----~~la~~~~~~vi~De~y--~--~~ 72 (259)
+|+|+.|...++..|.++..+.+|+++|++.++++++++++++||||||.++ .++|+++|+++|+||+| + ..
T Consensus 120 ~p~~~~~~~~~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g 199 (370)
T 2z61_A 120 NPCYPCYKNFIRFLGAKPVFCDFTVESLEEALSDKTKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEG 199 (370)
T ss_dssp SSCCTHHHHHHHHTTCEEEEECSSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSS
T ss_pred CCCchhHHHHHHHcCCEEEEeCCCHHHHHHhcccCceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCC
Confidence 5899999999998888776556899999999988889999999999999986 48899999999999999 2 11
Q ss_pred CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 73 HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 73 ~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
...++. +..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.++++.. .+.+
T Consensus 200 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~ 274 (370)
T 2z61_A 200 KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISN-DEIIEAILKLQQNLFISAPTISQYAALKAFEKE----TERE 274 (370)
T ss_dssp CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHH----HHHH
T ss_pred CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEEC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhcc----CHHH
Confidence 111221 24578999999999999999999999999 699999988877777789999999888888631 1356
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
+++.++.++++++.+.+.|++++ +....+++++++|++++....++...+++++||.++||..|+.
T Consensus 275 ~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~ 340 (370)
T 2z61_A 275 INSMIKEFDRRRRLVLKYVKDFG--------------WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGS 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--------------CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC--------------CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 78888999999999999998763 3344677899999998752234455555578999999999875
Q ss_pred -CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 230 -EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 -~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++++|||++.+++++++++++|++++++
T Consensus 341 ~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~~ 370 (370)
T 2z61_A 341 KGKNYIRISYANSYENIKEGLERIKEFLNK 370 (370)
T ss_dssp GGSSBEEEECCSCHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEEeCCHHHHHHHHHHHHHHHhC
Confidence 46899999988999999999999998753
No 21
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.4e-33 Score=251.89 Aligned_cols=243 Identities=16% Similarity=0.165 Sum_probs=190.1
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|...++..|.++. +|.+|+++|++.+++ ++++|+++|||||||.+++ ++|++
T Consensus 189 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~ 268 (500)
T 3tcm_A 189 IPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKN 268 (500)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHH
Confidence 4899999999999988752 468899999988854 6889999999999999972 67999
Q ss_pred CCcEEEeeccc----cCC--CCCCCC---------CCCCCeEEEecccccc-CCCcceEEEEEe---cCHHHHHHHHHhh
Q 024997 59 PYAKSIYDHAY----FWP--HFAPIP---------APADEELMIFTISKLT-GHAGSRFGWAVI---KDEAVYQRMSAYI 119 (259)
Q Consensus 59 ~~~~vi~De~y----~~~--~~~~~~---------~~~~~~i~~~S~SK~~-g~~G~R~G~i~~---~~~~~~~~~~~~~ 119 (259)
+|+++|+||+| |.. ...++. ....++++++||||.| |++|+|+||+++ + +++++.+....
T Consensus 269 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-~~~~~~l~~~~ 347 (500)
T 3tcm_A 269 EGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-APVREQIYKIA 347 (500)
T ss_dssp HTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-TTHHHHHHHHH
T ss_pred cCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-HHHHHHHHHHH
Confidence 99999999999 221 122211 1223579999999999 899999999998 6 69999888766
Q ss_pred hhhcCCCCHHHHHHHHHHHHHHHhcC-----CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC
Q 024997 120 SLNTMGVSRECQLRAFKLLKVVLEDG-----GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS 194 (259)
Q Consensus 120 ~~~~~~~~~~~q~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (259)
. ...+++.+.|.++..+++....++ ...+..+.+++++++++.+.+.|+++++ +.+..+++
T Consensus 348 ~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g-------------~~~~~~~g 413 (500)
T 3tcm_A 348 S-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEG-------------ITCNEAEG 413 (500)
T ss_dssp H-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT-------------EECCCCCB
T ss_pred h-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------cEEecCCe
Confidence 4 467889999999888886210000 1234667788899999999999987643 66678999
Q ss_pred CeeEEEecCCC--------------chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 195 PAYAWVKCERE--------------EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 195 ~~~~~~~~~~~--------------~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++|+|+++... +..++.++|+++||.++||+.|+. +.+++|++++.+++++++++++|++++++
T Consensus 414 ~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 414 AMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp TTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHH
T ss_pred EEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99999765421 122356888889999999999984 46799999998889999999999988763
No 22
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.3e-33 Score=243.00 Aligned_cols=240 Identities=15% Similarity=0.123 Sum_probs=199.4
Q ss_pred CCCcccchhhhhhccCcccccc----cChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE----GEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~----~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++..+. +|+++|++.++++++++++++||||||.+++ ++|+++|+++|+||+
T Consensus 112 ~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 191 (377)
T 3fdb_A 112 TPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEI 191 (377)
T ss_dssp ESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 4899999999998888764333 6889999998777899999999999999872 679999999999999
Q ss_pred c--c--CC--CCCCCCC--CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 69 Y--F--WP--HFAPIPA--PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 69 y--~--~~--~~~~~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
| | .. ...++.. ..+++++++|+||.+|++|+|+||+++.++++++.+.......+.+++++.|.++.++++.
T Consensus 192 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 271 (377)
T 3fdb_A 192 HAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRY 271 (377)
T ss_dssp TGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhc
Confidence 9 2 22 2223322 2467899999999999999999998885479999998877767788999999999999884
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHc
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAA 217 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~ 217 (259)
.++++++.+++++++++.+.+.|++ +++ +....+++++++|++++.. +.+....+++++
T Consensus 272 -----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 333 (377)
T 3fdb_A 272 -----GTDFLNQEVAYLKNNHDFLLHEIPKRIPG-------------AKITPMQATYLMWIDFRDTTIEGSPSEFFIEKA 333 (377)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHSTT-------------CEECCCSBCSEEEEECTTSCCCSCHHHHHHHHH
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------ceEecCCeeEEEEEECcccCCCHHHHHHHHHhC
Confidence 4567888999999999999999987 443 5566788899999998763 457788888878
Q ss_pred CeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
||.++||..|+. +++++|||++.+++++++++++|++++++
T Consensus 334 gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 334 KVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp CEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred CEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 999999999985 47899999988999999999999998864
No 23
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=8e-34 Score=255.25 Aligned_cols=243 Identities=18% Similarity=0.279 Sum_probs=188.2
Q ss_pred CCCcccchhhhhhccCccc----------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------Hhhc-CCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY----------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLK-GPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~----------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~-~~~~ 61 (259)
+|+|+.|...++..|..+. .|.+|+++|++.++++++++++++||||||.+++ ++|+ ++|+
T Consensus 200 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~ 279 (533)
T 3f6t_A 200 EPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKL 279 (533)
T ss_dssp SSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTC
T ss_pred CCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCC
Confidence 5899999998888776541 2678899999999889999999999999999972 6777 7999
Q ss_pred EEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHH-----------------------
Q 024997 62 KSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRM----------------------- 115 (259)
Q Consensus 62 ~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~----------------------- 115 (259)
++|+||+| |.....++. ...+++++++||||.+|++|+|+||++++++.+++.+
T Consensus 280 ~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p 359 (533)
T 3f6t_A 280 MIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDP 359 (533)
T ss_dssp EEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCG
T ss_pred EEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCc
Confidence 99999999 322222221 2346899999999999999999999999853233222
Q ss_pred -------------HHhhhhhcCCCCHHHHHHH----HHHHHH-HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 024997 116 -------------SAYISLNTMGVSRECQLRA----FKLLKV-VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQ 177 (259)
Q Consensus 116 -------------~~~~~~~~~~~~~~~q~~~----~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 177 (259)
.......+.+++++.|.++ ...+.. +-++..+.++.+.++.++++++.+.+.|. ++
T Consensus 360 ~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~----- 433 (533)
T 3f6t_A 360 DKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-AP----- 433 (533)
T ss_dssp GGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CC-----
T ss_pred chhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CC-----
Confidence 2333455678899999884 334420 00013567888999999999999999996 43
Q ss_pred cccccccccceeeCCCCCeeEEEecCC------------------CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee
Q 024997 178 EIAPQYCTYFKKIRPPSPAYAWVKCER------------------EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL 239 (259)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~ 239 (259)
+....+.+++|+|++++. .+.+++..+++++||.+.||+.|+.+.+++|||++
T Consensus 434 ---------~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a 504 (533)
T 3f6t_A 434 ---------KDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA 504 (533)
T ss_dssp ---------CCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS
T ss_pred ---------ccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe
Confidence 344578999999999863 23477788888999999999999987799999998
Q ss_pred c-ChhhHHHHHHHHHHHhhh
Q 024997 240 K-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 240 ~-~~~~~~~~~~~l~~~l~~ 258 (259)
. +++++++++++|++++++
T Consensus 505 ~~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 505 NLPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp SSCHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHHH
Confidence 6 999999999999988753
No 24
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.4e-33 Score=254.04 Aligned_cols=237 Identities=16% Similarity=0.231 Sum_probs=180.7
Q ss_pred CCCcccchhhhhhcc--Ccc--------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------Hhh--cCCC
Q 024997 1 MPFYPLYQEQTDYFE--SVD--------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVL--KGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g--~~~--------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la--~~~~ 60 (259)
+|+|+.|...+.+.+ .++ .+|.+|+++|++.+++++++++++|||||||.+++ ++| +++|
T Consensus 201 ~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~ 280 (546)
T 2zy4_A 201 MPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPD 280 (546)
T ss_dssp ESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTT
T ss_pred CCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCC
Confidence 599999998866543 332 24678999999888888999999999999999982 677 8899
Q ss_pred cEEEeeccc--cCCCCCCCCC-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHh-------------h-----
Q 024997 61 AKSIYDHAY--FWPHFAPIPA-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY-------------I----- 119 (259)
Q Consensus 61 ~~vi~De~y--~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~-------------~----- 119 (259)
++||+||+| |.....++.. ..+++++++||||.+|++|+|+||++++++++++.+... .
T Consensus 281 ~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~ 360 (546)
T 2zy4_A 281 LMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPD 360 (546)
T ss_dssp CEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSC
T ss_pred cEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhcccc
Confidence 999999999 3221222211 246899999999999999999999999842377776321 1
Q ss_pred ------------------hhhcCCCCHHHHHHHH-----HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 024997 120 ------------------SLNTMGVSRECQLRAF-----KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSL 176 (259)
Q Consensus 120 ------------------~~~~~~~~~~~q~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (259)
...+.+++.+.|.++. ++++ ..+.+.++.++.++++++.+.+.|. ++
T Consensus 361 p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~-----~~~~~~~~~r~~~~~r~~~l~~~L~-~~---- 430 (546)
T 2zy4_A 361 VRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD-----EADEYKHTLKQLIRRRETTLYRELG-MP---- 430 (546)
T ss_dssp GGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC-----TTCHHHHHHHHHHHHHHHHHHGGGT-SS----
T ss_pred ccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhcC-CC----
Confidence 1233578889888742 3333 2467788888889888888777774 22
Q ss_pred ccccccccccceeeCCCCCeeEEEecCC------------------CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 177 QEIAPQYCTYFKKIRPPSPAYAWVKCER------------------EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
+...++++++|+|++++. .+.+++.++++++||.++||+.|+.+.+++|||+
T Consensus 431 ----------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~ 500 (546)
T 2zy4_A 431 ----------PLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASL 500 (546)
T ss_dssp ----------CCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEES
T ss_pred ----------cccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEe
Confidence 333477899999999753 1245677888899999999999998778999999
Q ss_pred ec-ChhhHHHHHHHHHHHhh
Q 024997 239 LK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 239 ~~-~~~~~~~~~~~l~~~l~ 257 (259)
+. +++++++++++|+++++
T Consensus 501 ~~~~~e~i~~~~~~l~~~l~ 520 (546)
T 2zy4_A 501 ANLNEYEYAAIGRALRKMAD 520 (546)
T ss_dssp SSSCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 87 88999999999998875
No 25
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=4.5e-33 Score=240.75 Aligned_cols=238 Identities=16% Similarity=0.199 Sum_probs=193.3
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .++|+++|+++|
T Consensus 121 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 200 (388)
T 1j32_A 121 APFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVL 200 (388)
T ss_dssp SSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 5899999999888887641 356788999999988899999999999999985 278999999999
Q ss_pred eeccc--c--CC-CCCCCCC----CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 65 YDHAY--F--WP-HFAPIPA----PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 65 ~De~y--~--~~-~~~~~~~----~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
+||+| + .. ...++.. ..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.
T Consensus 201 ~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~ 279 (388)
T 1j32_A 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGP-VPLVKAATKIQGHSTSNVCTFAQYGAI 279 (388)
T ss_dssp EECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECC-HHHHHHHHHHHHTTTCSCCHHHHHHHH
T ss_pred EEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeC-HHHHHHHHHHHhhcccCCCHHHHHHHH
Confidence 99999 2 11 1122221 1457999999999999999999999999 699999988877777889999999988
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--Cc-hHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EE-DKDCYG 212 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~ 212 (259)
++++. .++++++.+++++++++.+.+.|+++++ +....+.+++++|++++. .+ .++...
T Consensus 280 ~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (388)
T 1j32_A 280 AAYEN-----SQDCVQEMLAAFAERRRYMLDALNAMPG-------------LECPKPDGAFYMFPSIAKTGRSSLDFCSE 341 (388)
T ss_dssp HHHHS-----CSHHHHHHHHHHHHHHHHHHHHHHTCTT-------------CBCCCCCBTTEECCBCGGGTCCHHHHHHH
T ss_pred HHHhC-----CcHHHHHHHHHHHHHHHHHHHHHhhCCC-------------CcccCCCeeEEEEEecCCCCCCHHHHHHH
Confidence 88873 4567888999999999999999987643 344567788999998863 23 345555
Q ss_pred HHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 213 ILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+++++||.++||..|+. ++++|+|++.+++++++++++|++++++
T Consensus 342 l~~~~gi~v~~g~~~~~-~~~iRis~~~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 342 LLDQHQVATVPGAAFGA-DDCIRLSYATDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp HHHHHCEECEEGGGGTC-TTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEeChhhhCC-CCcEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 55568999999998875 4899999988999999999999998764
No 26
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=5.5e-33 Score=239.45 Aligned_cols=239 Identities=14% Similarity=0.153 Sum_probs=193.3
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~v 63 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~l 192 (383)
T 3kax_A 113 PPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIV 192 (383)
T ss_dssp SSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEE
T ss_pred CCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEE
Confidence 5899999999988887652 2458999999999888999999999999999862 6699999999
Q ss_pred Eeeccc--c--CC-CCCCCCCC----CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc-CCCCHHHHHH
Q 024997 64 IYDHAY--F--WP-HFAPIPAP----ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT-MGVSRECQLR 133 (259)
Q Consensus 64 i~De~y--~--~~-~~~~~~~~----~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~ 133 (259)
|+||+| | .. ...++... .+++++++|+||.+|++|+|+||++++++++++.+........ .+++++.|.+
T Consensus 193 i~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 272 (383)
T 3kax_A 193 VADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTA 272 (383)
T ss_dssp EEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHH
T ss_pred EEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHH
Confidence 999999 2 11 12222211 3788999999999999999999999854789999888766543 4788999999
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCC--ch-HH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--ED-KD 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 209 (259)
+..+++. .++++++.+++++++++.+.+.|++ +++ +....+.+++++|++++.. +. ++
T Consensus 273 ~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (383)
T 3kax_A 273 MQSAYTE-----CNDWLNEIRFYIEDNAKFACEYIKDHIPT-------------LSVMKPEGSFLLWIDCSALNLSQDER 334 (383)
T ss_dssp HHHHTTT-----CHHHHHHHHHHHHHHHHHHHHHHHHHCTT-------------CEECCCSBSSEEEEECGGGCCCHHHH
T ss_pred HHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------ceEecCCceEEEEEEccccCCCHHHH
Confidence 9888873 4567888899999999999999987 443 5556788899999998752 34 44
Q ss_pred HHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
...+++++||.++||..|+. +.+++|++++.+++++++++++|+++++
T Consensus 335 ~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 383 (383)
T 3kax_A 335 TKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTFS 383 (383)
T ss_dssp HHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 55555578999999999985 4789999998899999999999998864
No 27
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=6.9e-33 Score=240.34 Aligned_cols=232 Identities=16% Similarity=0.232 Sum_probs=185.3
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcC------C
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKG------P 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~------~ 59 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.+++ ++|++ +
T Consensus 131 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~ 210 (398)
T 3ele_A 131 APYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR 210 (398)
T ss_dssp SSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCC
Confidence 5899999999998887652 4678899999999889999999999999999983 77888 9
Q ss_pred CcEEEeeccc--c--CC-CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHH------HHHHHHHhhhh-hcCCCC
Q 024997 60 YAKSIYDHAY--F--WP-HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEA------VYQRMSAYISL-NTMGVS 127 (259)
Q Consensus 60 ~~~vi~De~y--~--~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~------~~~~~~~~~~~-~~~~~~ 127 (259)
|+++|+||+| | .. .........+++++++|+||.+|++|+|+||+++++ + +.+.+...... ...+++
T Consensus 211 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (398)
T 3ele_A 211 PIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPD-EVYDKAELYAAVCGAGRALGYVCAP 289 (398)
T ss_dssp CCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCT-TSTTHHHHHHHHHHHHHHTTCCCSC
T ss_pred CeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcc-hhhhHHHHHHHHHHHhhhccccCCC
Confidence 9999999999 2 22 122222456789999999999999999999999994 5 44444444333 246778
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCch
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREED 207 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (259)
.+.|.++..+++. .. .++.++++++.+.+.|++++ +....+++++++|++++..+.
T Consensus 290 ~~~~~a~~~~l~~-----~~-----~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~ 345 (398)
T 3ele_A 290 SLFQKMIVKCQGA-----TG-----DINAYKENRDLLYEGLTRIG--------------YHCFKPDGAFYMFVKALEDDS 345 (398)
T ss_dssp HHHHHHHTTCTTC-----CC-----CHHHHHHHHHHHHHHHHHHT--------------CCEECCSBSSEEEEECSSSCH
T ss_pred HHHHHHHHHHhcC-----HH-----HHHHHHHHHHHHHHHHHHcC--------------CeecCCCeeEEEEEEcCCCCH
Confidence 8889888777762 22 26788899999999998763 455678899999999986555
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+.|.++||.++||..|+. ++++|||++.+++++++++++|++++++
T Consensus 346 ~~~~~~l~~~gi~v~~g~~~~~-~~~iRis~~~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 346 NAFCEKAKEEDVLIVAADGFGC-PGWVRISYCVDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp HHHHHHHHTTTEECEESGGGTC-TTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 5566677789999999999986 4899999988999999999999998764
No 28
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.7e-33 Score=244.64 Aligned_cols=239 Identities=17% Similarity=0.173 Sum_probs=195.5
Q ss_pred CCCcccchhhhhhccCccc------------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCC
Q 024997 1 MPFYPLYQEQTDYFESVDY------------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~ 60 (259)
+|+|+.+...++..|.++. .+.+|++.|++.++++++++++++||||||.+++ ++|+++|
T Consensus 133 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 212 (407)
T 3nra_A 133 QPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYG 212 (407)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcC
Confidence 4889999999988887652 3456889999988778899999999999999962 7899999
Q ss_pred cEEEeeccc--c--CC-CCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH
Q 024997 61 AKSIYDHAY--F--WP-HFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 61 ~~vi~De~y--~--~~-~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
+++|+||+| + .. ....+. ...+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|
T Consensus 213 ~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 291 (407)
T 3nra_A 213 ATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIARMEKLQAIVSLRAAGYSQ 291 (407)
T ss_dssp CEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHHHHHHHHHHHTSSSCHHHH
T ss_pred CEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHHHHHHHHhhhccCCChHHH
Confidence 999999999 2 21 222221 23567999999999999999999999998 79999999888877888889999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--c-hH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--E-DK 208 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~ 208 (259)
.++..+++. ...++++.+++++++++.+.+.|+++++ +....+.+++++|++++.. + .+
T Consensus 292 ~a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (407)
T 3nra_A 292 AVLRGWFDE-----APGWMEDRIARHQAIRDELLHVLRGCEG-------------VFARTPQAGSYLFPRLPKLAVAPAE 353 (407)
T ss_dssp GGGGGTTCC-----CTTHHHHHHHHHHHHHHHHHHHHHTSTT-------------CBCCCCSBSSEECCBCCCBSSCHHH
T ss_pred HHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHhcCCC-------------ceeccCCeeEEEEEeCCCCCCCHHH
Confidence 888777762 4567888899999999999999987643 4445778889999998752 3 34
Q ss_pred HHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.++||..|+. +.+++|||++.+++++++++++|++++++
T Consensus 354 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 354 FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVER 404 (407)
T ss_dssp HHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 555555678999999999985 57899999988999999999999998764
No 29
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.6e-32 Score=235.17 Aligned_cols=229 Identities=18% Similarity=0.195 Sum_probs=181.6
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~D 66 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++ +++++++++||||||.+++ ++|+ +|+++|+|
T Consensus 107 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~D 184 (356)
T 1fg7_A 107 PPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVAD 184 (356)
T ss_dssp SSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEE
T ss_pred CCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEE
Confidence 5899999999998887652 35688899998888 8899999999999999872 5677 99999999
Q ss_pred ccc--cC--CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHH
Q 024997 67 HAY--FW--PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVL 142 (259)
Q Consensus 67 e~y--~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 142 (259)
|+| |. .+...+.+..+++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++.++++..
T Consensus 185 e~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~- 260 (356)
T 1fg7_A 185 EAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN-EEVINLLMKVIAP--YPLSTPVADIAAQALSPQ- 260 (356)
T ss_dssp CTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHHHHHHHHSCS--SCSCHHHHHHHHHHTSHH-
T ss_pred ccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCc-
Confidence 999 33 122222234567999999999999999999999998 7999998876553 478999999999888742
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeee
Q 024997 143 EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGR 222 (259)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~ 222 (259)
..+++++.+++++++++.+.+.|+++++ +....+.+++|+|++++ +.+.+.+.|.++||.++
T Consensus 261 ---~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~gI~v~ 322 (356)
T 1fg7_A 261 ---GIVAMRERVAQIIAEREYLIAALKEIPC-------------VEQVFDSETNYILARFK--ASSAVFKSLWDQGIILR 322 (356)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHSTT-------------EEEECCCSSSEEEEEET--THHHHHHHHHHTTEECE
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------ceEECCCCCeEEEEECC--CHHHHHHHHHHCCEEEE
Confidence 1123788899999999999999987652 12234567889999987 34444455578999999
Q ss_pred c-CCcccCCCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 223 E-GKKFRAEARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 223 ~-g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
+ |..|+.+ +++|||++ +++++++++++|+++
T Consensus 323 ~~g~~~~~~-~~iRis~~-~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 323 DQNKQPSLS-GCLRITVG-TREESQRVIDALRAE 354 (356)
T ss_dssp ECTTSTTCT-TEEEEECC-CHHHHHHHHHHHHTC
T ss_pred ECCCCCCCC-CeEEEEeC-CHHHHHHHHHHHHhh
Confidence 9 8887753 69999996 578999999998865
No 30
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=9.3e-34 Score=246.53 Aligned_cols=235 Identities=12% Similarity=-0.001 Sum_probs=176.9
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC--CCceEEEEcCC-CCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS--DTHLVEFVTAP-NNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~--~~~~~i~i~~p-~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|++|..+++..|.++. +|++|++.|++.++ ++++++++++| |||||.+++ ++|+++|+
T Consensus 129 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~ 208 (405)
T 3k7y_A 129 NPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKH 208 (405)
T ss_dssp SSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCe
Confidence 6999999999999998652 37889999998884 45677777665 899999993 78899999
Q ss_pred EEEeeccc--c--CC-C--CCCC---CCCCCCeEEEeccccccCCCcceEEEEEe--cCHHHHHHHHH----hhhhhcCC
Q 024997 62 KSIYDHAY--F--WP-H--FAPI---PAPADEELMIFTISKLTGHAGSRFGWAVI--KDEAVYQRMSA----YISLNTMG 125 (259)
Q Consensus 62 ~vi~De~y--~--~~-~--~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~~~~~~~----~~~~~~~~ 125 (259)
+||+||+| | +. . ..++ ....+++|+++||||+|+++|||+||+++ +++++++.+.. ..+....+
T Consensus 209 ~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (405)
T 3k7y_A 209 VIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSS 288 (405)
T ss_dssp EEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSS
T ss_pred EEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 99999999 3 21 1 0111 13457899999999999999999999864 34677665543 33334456
Q ss_pred CCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHH----hcCCCccccccccccccceeeCCCCCeeEEE
Q 024997 126 VSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIIS----LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWV 200 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (259)
++.+.|.++..+++... .+...+++.+.+++++++++.+.+.|+ +++. + ..|.+..+++|+|+|+
T Consensus 289 ~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~------~----~~~~~~~p~gg~f~~~ 358 (405)
T 3k7y_A 289 PVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNL------N----YDWNVYKKQRGLFSFV 358 (405)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTC------C----CCGGGGSSCCSSEEEC
T ss_pred CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC------C----CCCccccCCceEEEec
Confidence 77899999888887310 000234566778889999999999998 6541 0 0045568999999999
Q ss_pred ecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 201 KCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 201 ~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+++. +++..+ +++||.++||. |||++. +++++++++++|++++++
T Consensus 359 ~l~~---~~~~~L-~~~gV~v~p~~---------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 359 PLLA---KIAEHL-KTHHIYIINNG---------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp GGGG---GGTTTT-TTTTEECCTTS---------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred CCCH---HHHHHH-HHCCEeecCCC---------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 8753 455565 88999999942 999987 899999999999998864
No 31
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=5.7e-33 Score=239.23 Aligned_cols=235 Identities=17% Similarity=0.209 Sum_probs=188.6
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~D 66 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|+|
T Consensus 118 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 197 (376)
T 2dou_A 118 EVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHD 197 (376)
T ss_dssp SSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 5899999999988887652 3457888898888777899999999999999862 7899999999999
Q ss_pred ccc--c--CCCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 67 HAY--F--WPHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 67 e~y--~--~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
|+| | .....+ ..+..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.++++
T Consensus 198 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 276 (376)
T 2dou_A 198 NPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEALARLERVKGVIDFNQYAGVLRMGVEALK 276 (376)
T ss_dssp CTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCSCHHHHHHHHHHHT
T ss_pred ccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 999 3 221111 1123467999999999999999999999998 7999999888777777889999999998887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcC
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAK 218 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~g 218 (259)
. .++++++.++.++++++.+.+.|+++ +....+.+|+|+|++++.. +.+.+.+.|.++|
T Consensus 277 ~-----~~~~~~~~~~~~~~~~~~l~~~L~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 336 (376)
T 2dou_A 277 T-----PKEVVRGYARVYRERALGMAEALKGV---------------LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERG 336 (376)
T ss_dssp S-----CHHHHHHHHHHHHHHHHHHHHHHTTT---------------SEECCCCBSSEEEEECCTTCCHHHHHHHHHHTT
T ss_pred C-----cHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCccCCCeeEEEEEECCCCCCHHHHHHHHHHCC
Confidence 3 35678888999999999999998753 1234567889999998743 3333444444569
Q ss_pred eeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 219 IIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 219 i~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
|.++||..|+. +++++|||++.+++++++++++|++++
T Consensus 337 i~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 337 VALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp EECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred EEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 99999998875 468999999888999999999999876
No 32
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-32 Score=240.26 Aligned_cols=238 Identities=16% Similarity=0.212 Sum_probs=192.9
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~v 63 (259)
+|+|+.|...++..|.++. +|.+|++.|++.++++++++++++|+||||.++ .++|+++|+++
T Consensus 117 ~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~l 196 (411)
T 2o0r_A 117 EPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVV 196 (411)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 4899999999888887652 355889999999988899999999999999986 27899999999
Q ss_pred Eeeccc--c--CC-CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 64 IYDHAY--F--WP-HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 64 i~De~y--~--~~-~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
|+||+| + .. ...++. ...+++++++|+||.+|++|+|+||++++ +++++.+.......+++.+++.|.++.
T Consensus 197 i~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~ 275 (411)
T 2o0r_A 197 ITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-AELIAGVRAAKQYLSYVGGAPFQPAVA 275 (411)
T ss_dssp EEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-HHHHHHHHHHHHHHTSCCCTTHHHHHH
T ss_pred EEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-HHHHHHHHHHHhhccCCCChHHHHHHH
Confidence 999999 2 11 112221 23567999999999999999999999998 799999988776666778889999998
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---Cc-hHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EE-DKDCY 211 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ 211 (259)
.+++. .+.++++.++.++++++.+.+.|++++ +....+++|+++|++++. .+ .++..
T Consensus 276 ~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 336 (411)
T 2o0r_A 276 LALDT-----EDAWVAALRNSLRARRDRLAAGLTEIG--------------FAVHDSYGTYFLCADPRPLGYDDSTEFCA 336 (411)
T ss_dssp HHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHT--------------CEECCCCBSSEEEEECGGGTCCCHHHHHH
T ss_pred HHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHHcC--------------CEecCCCeeEEEEEecCCCCCCCHHHHHH
Confidence 88874 356788889999999999999998763 445567789999999875 22 35555
Q ss_pred HHHHHcCeeeecCCcccC------------CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRA------------EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~------------~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++||.++||..|.. +++++|||++.+++++++++++|++++++
T Consensus 337 ~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 337 ALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp HHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC-
T ss_pred HHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 567678999999998842 25789999988899999999999988753
No 33
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.2e-32 Score=238.84 Aligned_cols=240 Identities=14% Similarity=0.104 Sum_probs=191.4
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCC-CCceEEEEcCCCCCChhhHH--------HhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~ 62 (259)
+|+|+.|...++..|.++. .|.+|+++|++.++ ++++++++++||||||.+++ ++|+++|++
T Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~ 199 (399)
T 1c7n_A 120 TPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLM 199 (399)
T ss_dssp SSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCE
T ss_pred CCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCE
Confidence 5899999999888887652 24488899999886 68899999999999999862 889999999
Q ss_pred EEeeccc--c--CC-CCCCCCCC----CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcC-CCCHHHHH
Q 024997 63 SIYDHAY--F--WP-HFAPIPAP----ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM-GVSRECQL 132 (259)
Q Consensus 63 vi~De~y--~--~~-~~~~~~~~----~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~q~ 132 (259)
+|+||+| | .. ...++... .+++++++|+||.+|++|+|+||++++++++++.+.......+. +++++.|.
T Consensus 200 li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 279 (399)
T 1c7n_A 200 LWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYK 279 (399)
T ss_dssp EEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHH
Confidence 9999999 2 11 12222222 46789999999999999999999999755799998887765544 67899999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCC--Cch-H
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EED-K 208 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 208 (259)
++.++++. .++++++.++.++++++.+.+.|++ +++ +....+.+++++|++++. .+. +
T Consensus 280 a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (399)
T 1c7n_A 280 ACEICYKE-----CGKWLDGCIKVIDKNQRIVKDFFEVNHPE-------------IKAPLIEGTYLQWIDFRALKMDHKA 341 (399)
T ss_dssp HHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHCTT-------------SBCCCCSBSSEEEEECGGGCCCHHH
T ss_pred HHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------CeEecCCceEEEEEEcccCCCCHHH
Confidence 98888874 3567888899999999999999987 554 334567888999999874 234 4
Q ss_pred HHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.++||..|+. +++++|||++..++++++++++|.+++++
T Consensus 342 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 342 MEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKD 392 (399)
T ss_dssp HHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHH
Confidence 444555578999999998874 46899999988888999999999988753
No 34
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.5e-33 Score=243.69 Aligned_cols=237 Identities=19% Similarity=0.270 Sum_probs=183.6
Q ss_pred CCCcccchhhhhhccC------------cccccccChh-hhcccC--CCCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTDYFES------------VDYKFEGEAN-LWGNAS--SDTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~------------~~~~~~~d~~-~l~~~~--~~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|++|...++..|. .+..+..+.+ .+...+ .++++++++++||||||.+++ ++|+
T Consensus 149 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~ 228 (432)
T 3ei9_A 149 DPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228 (432)
T ss_dssp ESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4899999999888774 2222222221 111111 357889999999999999872 6799
Q ss_pred CCCcEEEeeccc--c--CCCCCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHH--------HHHHHHhhhhh
Q 024997 58 GPYAKSIYDHAY--F--WPHFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAV--------YQRMSAYISLN 122 (259)
Q Consensus 58 ~~~~~vi~De~y--~--~~~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~--------~~~~~~~~~~~ 122 (259)
++|+++|+||+| | +....++ .+..+++++++|+||.||++|+|+||+++++ ++ ++.+.......
T Consensus 229 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 307 (432)
T 3ei9_A 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPK-KLLYSDGFPVAKDFNRIICTC 307 (432)
T ss_dssp HHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCT-TCBCTTSCBHHHHHHHHHHHS
T ss_pred HcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEECh-HHhhcchHHHHHHHHHHhccc
Confidence 999999999999 3 2222222 2335679999999999999999999999994 76 78787776666
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC 202 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (259)
..+++++.|.++.+++... ...++++.+++++++++.+.+.|++++ +....+.+++|+|+++
T Consensus 308 ~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~ 369 (432)
T 3ei9_A 308 FNGASNISQAGALACLTPE----GLEAMHKVIGFYKENTNIIIDTFTSLG--------------YDVYGGKNAPYVWVHF 369 (432)
T ss_dssp CCCSCHHHHHHHHHHSSHH----HHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCEEECSSSSEEEEEC
T ss_pred cCCCCHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHHHHHHHHCC--------------ceecCCCcceEEEEEC
Confidence 6778999999988888631 235788889999999999999998763 4455677899999999
Q ss_pred CCCc-hHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 203 EREE-DKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 203 ~~~~-~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
+..+ .+++..+++++||.++||..|+. +++++|||++.+++++++++++|++-.
T Consensus 370 ~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 370 PNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425 (432)
T ss_dssp TTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 8543 46677788888999999999985 578999999889999999999998753
No 35
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.9e-32 Score=237.37 Aligned_cols=244 Identities=13% Similarity=0.158 Sum_probs=192.4
Q ss_pred CCCcccchhhhhhccCccccc-----ccChhhhcccCC-CCceEEEEc-CCCCCChhhHH--------Hhh-cCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-----EGEANLWGNASS-DTHLVEFVT-APNNPDGQMNK--------AVL-KGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-----~~d~~~l~~~~~-~~~~~i~i~-~p~NPtG~~~~--------~la-~~~~~~vi 64 (259)
+|+|+.|...++..|.++..+ ++|+++|++.++ +++++++++ +||||||.+++ ++| +++|++||
T Consensus 140 ~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii 219 (427)
T 3ppl_A 140 VPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVV 219 (427)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEE
T ss_pred CCCcHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEE
Confidence 489999999999998876332 478889999884 678887755 78999999982 778 89999999
Q ss_pred eeccc----cCCCC-C--CCC------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH
Q 024997 65 YDHAY----FWPHF-A--PIP------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 65 ~De~y----~~~~~-~--~~~------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
+||+| |.... . ++. +..+++++++||||. +++|+|+||++++ +++++.+.........+++++.|
T Consensus 220 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~q 297 (427)
T 3ppl_A 220 WDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFFLTS-AENRKWYTGHAGIRGIGPNKVNQ 297 (427)
T ss_dssp EECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHH
T ss_pred EECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEEEcC-HHHHHHHHHHhhcccCCCCHHHH
Confidence 99999 32211 1 111 256789999999999 6799999999999 79999999988878899999999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCCchHHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDC 210 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (259)
.++..+++.. +..+.++.+.++.++++++.+.+.|.+ ++.+ . .+.+..|++|+|+|++++..+.+.+
T Consensus 298 ~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~-----~-----~~~~~~p~~g~~~~~~~~~~~~~~~ 365 (427)
T 3ppl_A 298 LAHARYFGDA--EGVRAVMRKHAASLAPKFNKVLEILDSRLAEY-----G-----VAQWTVPAGGYFISLDVVPGTASRV 365 (427)
T ss_dssp HHHHHHHCSH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-----T-----CCEECCCSBSSCEEEECSTTCHHHH
T ss_pred HHHHHHHhCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----C-----ceEEeCCCccEEEEEECCcchHHHH
Confidence 9999998731 012456788888999999999888865 2210 0 1445578899999999986555666
Q ss_pred HHHHHHcCeeeec-CCcccC----CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 211 YGILKAAKIIGRE-GKKFRA----EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 211 ~~ll~~~gi~~~~-g~~f~~----~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
.+.|.++||.++| |..|+. ..+++|||++. +++++++++++|.+++++
T Consensus 366 ~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 366 AELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLL 419 (427)
T ss_dssp HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 7778889999999 556652 46899999987 889999999999988763
No 36
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=4.7e-33 Score=245.25 Aligned_cols=240 Identities=20% Similarity=0.290 Sum_probs=186.4
Q ss_pred CCCcccchhhhhhccCc----------ccccccChh-hhcccC--CCCceEEEEcCCCCCChhhHH--------HhhcCC
Q 024997 1 MPFYPLYQEQTDYFESV----------DYKFEGEAN-LWGNAS--SDTHLVEFVTAPNNPDGQMNK--------AVLKGP 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~----------~~~~~~d~~-~l~~~~--~~~~~~i~i~~p~NPtG~~~~--------~la~~~ 59 (259)
+|+|+.|...++..|.+ +..+..+.+ .+...+ .++++++++++||||||.+++ ++|+++
T Consensus 162 ~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~ 241 (449)
T 3qgu_A 162 DPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN 241 (449)
T ss_dssp ESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence 48999999999999877 543443332 222222 157889999999999999872 778999
Q ss_pred CcEEEeeccc--c--CCC-CCCC---CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHH--------HHHHhhhhhc
Q 024997 60 YAKSIYDHAY--F--WPH-FAPI---PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQ--------RMSAYISLNT 123 (259)
Q Consensus 60 ~~~vi~De~y--~--~~~-~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~--------~~~~~~~~~~ 123 (259)
|+++|+||+| | .+. ..++ ....+++++++|+||.+|++|+|+||++++ +++++ .+........
T Consensus 242 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 320 (449)
T 3qgu_A 242 GSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVP-KALKYANGEPVHADWNRVMTTCF 320 (449)
T ss_dssp TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECC-TTCBCTTSCBHHHHHHHHHHHSC
T ss_pred CcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecC-HHHHhhhhhhHHHHHHHHhhccc
Confidence 9999999999 3 221 1122 223567899999999999999999999999 47765 4555555556
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC
Q 024997 124 MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE 203 (259)
Q Consensus 124 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (259)
.+++++.|.++.++++.. ...++.+.+++++++++.+.+.|++++ +....+++++|+|++++
T Consensus 321 ~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~ 382 (449)
T 3qgu_A 321 NGASNIVQAGGLACLQPE----GLKEMNAMIKFYKENAQILKTTFTEMG--------------FSVYGGDDAPYIWVGFP 382 (449)
T ss_dssp CCCCHHHHHHHHHHTSHH----HHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCEEESSSSSEEEEECT
T ss_pred CCCCHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeeeCCCCeeEEEEECC
Confidence 688999999999888742 235788889999999999999998764 45567788999999997
Q ss_pred CCc-hHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhhC
Q 024997 204 REE-DKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 204 ~~~-~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~~ 259 (259)
..+ .+++..+++++||.++||..|+. +++++|||++.+++++++++++|+++++++
T Consensus 383 ~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 383 GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 433 46667778778999999999985 578999999779999999999999998764
No 37
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.7e-32 Score=240.68 Aligned_cols=241 Identities=17% Similarity=0.125 Sum_probs=194.5
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccC-CCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNAS-SDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++.+ +++++++++++||||||.++ .++|+++|+++|
T Consensus 140 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 219 (437)
T 3g0t_A 140 DPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVI 219 (437)
T ss_dssp ESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEE
Confidence 4899999999998888763 3457889999998 77899999999999999987 278999999999
Q ss_pred eeccc--c--CCC--C-------CCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHH-H----------------
Q 024997 65 YDHAY--F--WPH--F-------APIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQ-R---------------- 114 (259)
Q Consensus 65 ~De~y--~--~~~--~-------~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~-~---------------- 114 (259)
+||+| + ... . ..+.+..+++++++|+||.+|++|+|+||++++ +++++ .
T Consensus 220 ~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (437)
T 3g0t_A 220 EDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS-GKLYEREYPDLEESFGRLRFGEA 298 (437)
T ss_dssp EECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC-HHHHHCBCGGGHHHHSCSBHHHH
T ss_pred EEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC-HHHhhhhhhcccccccccchhHH
Confidence 99999 2 211 1 122234678999999999999999999999999 69998 7
Q ss_pred -HHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee---
Q 024997 115 -MSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI--- 190 (259)
Q Consensus 115 -~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--- 190 (259)
+.........+++++.|.++..+++... ..+.++++.+++++++++.+.+.|++++ +...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~ 362 (437)
T 3g0t_A 299 LSSSALYALSSGATHSAQWGMAAMLKACN--DGEYNFRDSVIEYGRKARIMKKMFLDNG--------------FNIVYDK 362 (437)
T ss_dssp HHTTHHHHHHSSSCHHHHHHHHHHHHHHH--TTSCCHHHHHHHHHHHHHHHHHHHHTTT--------------EEESSCE
T ss_pred HHHHHHhhhcCCCCHHHHHHHHHHHhCcH--hHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CEEeccc
Confidence 7776666678899999999999998521 1223388899999999999999999763 3344
Q ss_pred ----CCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCC-CeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 191 ----RPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEA-RFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 191 ----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~-~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
++.+++|+|++++..+.+.+.+.|.++||.++||..|+... +++|||++. +++++++++++|++++++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 363 DGNEPLADGFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp ETTEECCSSSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred cCCCCCceeEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 33789999999985455555555667899999999888654 889999987 999999999999998764
No 38
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4.8e-33 Score=239.53 Aligned_cols=232 Identities=16% Similarity=0.186 Sum_probs=187.5
Q ss_pred CCCcccchhhhhhccCcccccccChh-----hhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEAN-----LWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~~-----~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De 67 (259)
+|+|+.|...++..|.++..+..+.+ +|++.+.++++++++++||||||.+++ ++|+++|+++|+||
T Consensus 115 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 194 (376)
T 3ezs_A 115 NPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDE 194 (376)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred cCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEc
Confidence 48999999999988887754444333 566666667889999999999999972 67999999999999
Q ss_pred cc--c--CCCCCCCCC--------CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 68 AY--F--WPHFAPIPA--------PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 68 ~y--~--~~~~~~~~~--------~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
+| | .....++.. ..+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~ 273 (376)
T 3ezs_A 195 CYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD-SRLLEKYKAFRAYLGYTSANAIQKASE 273 (376)
T ss_dssp TTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHHTTTCCCCCHHHHHHHH
T ss_pred cchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC-HHHHHHHHHHHhhhcCCCChHHHHHHH
Confidence 99 2 121111111 4678999999999999999999999998 799999998887777889999999999
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHH
Q 024997 136 KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 215 (259)
.+++ ..+++++.++.++++++.+.+.|+ + +. .+.+++|+|++++ ...++...+++
T Consensus 274 ~~l~------~~~~~~~~~~~~~~~~~~l~~~l~--~--------------~~--~~~~~~~~~~~~~-~~~~~~~~l~~ 328 (376)
T 3ezs_A 274 AAWL------DDRHAEFFRNIYANNLKLARKIFK--N--------------TL--IYPYSFYVYLPVQ-NGENFAKTLYQ 328 (376)
T ss_dssp HHHH------CSHHHHHHHHHHHHHHHHHHHHST--T--------------CC--CCSBSSEEEEECS-CHHHHHHHHHH
T ss_pred HHHh------CcHHHHHHHHHHHHHHHHHHHHhc--C--------------CC--CCCcceEEEEECC-CHHHHHHHHHH
Confidence 9998 345678888899999998888876 2 32 5678999999997 23455556665
Q ss_pred HcCeeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 216 AAKIIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ~~gi~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++||.++||..|+. +.+++|||++.+++++++++++|++++++
T Consensus 329 ~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 329 NEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp HHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred hCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 58999999999983 57899999988999999999999998864
No 39
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-32 Score=237.67 Aligned_cols=233 Identities=23% Similarity=0.263 Sum_probs=189.7
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.++ .++|+++|+++|
T Consensus 132 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 211 (389)
T 1o4s_A 132 SPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 211 (389)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999988887652 356788999999988899999999999999985 278999999999
Q ss_pred eecccc----CCCCCCCC---CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 65 YDHAYF----WPHFAPIP---APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 65 ~De~y~----~~~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+||+|. .....++. ...+++++++|+||.+|++|+|+||++++ +++++.+.......+.+++++.|.++.++
T Consensus 212 ~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~ 290 (389)
T 1o4s_A 212 SDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISS-EKVATAVSKIQSHTTSCINTVAQYAALKA 290 (389)
T ss_dssp EECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHHHHTCSCCHHHHHHHHHH
T ss_pred EEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeC-HHHHHHHHHHhhhcccCCCHHHHHHHHHH
Confidence 999992 11111111 22578999999999999999999999998 69999998887777788899999988888
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc-hHHHHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE-DKDCYGILKA 216 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~ 216 (259)
++. . +++.++.++++++.+.+.|++++ +....+++++++|++++ .+ .++...++++
T Consensus 291 l~~-----~---~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~ 347 (389)
T 1o4s_A 291 LEV-----D---NSYMVQTFKERKNFVVERLKKMG--------------VKFVEPEGAFYLFFKVR-GDDVKFCERLLEE 347 (389)
T ss_dssp TTC-----C---CHHHHHHHHHHHHHHHHHHHHTT--------------CCCCCCSBSSEEEEECS-SCHHHHHHHHHHH
T ss_pred Hhc-----c---HHHHHHHHHHHHHHHHHHHHhcC--------------CeeecCCcceEEEEeCC-CCHHHHHHHHHHH
Confidence 872 2 67778899999999999998762 33446778899999886 33 4455555558
Q ss_pred cCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 217 AKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+||.++||..|+. ++++|+|++.+++++++++++|.+++++
T Consensus 348 ~gi~v~~g~~f~~-~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 348 KKVALVPGSAFLK-PGFVRLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp HCEECEEGGGGTC-TTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEeCchhcCC-CCeEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 8999999998876 4799999988999999999999998764
No 40
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-32 Score=236.65 Aligned_cols=240 Identities=14% Similarity=0.115 Sum_probs=194.2
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCC-CCceEEEEcCCCCCChhhH--------HHhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN--------KAVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~ 62 (259)
+|+|+.+...++..|.++. .|.+|+++|++.++ ++++++++++||||||.++ .++|+++|++
T Consensus 116 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 195 (391)
T 3dzz_A 116 EPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVL 195 (391)
T ss_dssp SSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCE
T ss_pred CCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCE
Confidence 5889999999988887652 23488999999996 7899999999999999995 2789999999
Q ss_pred EEeeccc--c--CC-CCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh-hcCCCCHHHHH
Q 024997 63 SIYDHAY--F--WP-HFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL-NTMGVSRECQL 132 (259)
Q Consensus 63 vi~De~y--~--~~-~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 132 (259)
+|+||+| | .. ...++. ...+++++++|+||.+|++|+|+||++++++++++.+...... ...+++++.|.
T Consensus 196 li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (391)
T 3dzz_A 196 LISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIP 275 (391)
T ss_dssp EEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHH
T ss_pred EEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHH
Confidence 9999999 2 11 222222 1256789999999999999999999999756899998877543 34678889999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCC--ch-H
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--ED-K 208 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 208 (259)
++..+++. .+.++++.+++++++++.+.+.|++ +++ +....+.+++++|++++.. +. +
T Consensus 276 a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (391)
T 3dzz_A 276 AAIAAYEE-----GHDWLRELKQVLRDNFAYAREFLAKEVPE-------------VKVLDSNASYLAWVDISALGMNAED 337 (391)
T ss_dssp HHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHCTT-------------SEECCCCBSSEEEEECGGGCSCHHH
T ss_pred HHHHHHhc-----cHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------cEEeccCceEEEEEehhhcCCCHHH
Confidence 99888874 4567888999999999999999987 554 4556788899999998752 44 4
Q ss_pred HHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.++||..|+. +++++|||++.+++++++++++|.+++++
T Consensus 338 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 338 FCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp HHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 455555689999999999985 46899999988999999999999998864
No 41
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=2.4e-32 Score=235.71 Aligned_cols=237 Identities=14% Similarity=0.218 Sum_probs=192.7
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~v 63 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++++++++++++||||||.++ .++|+++|+++
T Consensus 109 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~l 188 (381)
T 1v2d_A 109 EPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFL 188 (381)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEE
Confidence 4899999998888887652 245788999999988899999999999999986 27899999999
Q ss_pred Eeecccc----CCCCCCCCC-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHH
Q 024997 64 IYDHAYF----WPHFAPIPA-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 64 i~De~y~----~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 138 (259)
|+||+|. +....++.. ..+++++++|+||.+|++|+|+||++++ +++++.+........++++++.|.++..++
T Consensus 189 i~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 267 (381)
T 1v2d_A 189 ISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGP-KEFMPRLAGMRQWTSFSAPTPLQAGVAEAL 267 (381)
T ss_dssp EEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECC-TTTHHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred EEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHH
Confidence 9999992 111112111 3578999999999999999999999998 599998887776667888999999998888
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcC
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAK 218 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 218 (259)
+.. ..++++++.+++++++++.+.+.|++.+ +....+++++++|++++.. + +..+++++|
T Consensus 268 ~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~--~-~~~~l~~~g 327 (381)
T 1v2d_A 268 KLA---RREGFYEALREGYRRRRDLLAGGLRAMG--------------LRVYVPEGTYFLMAELPGW--D-AFRLVEEAR 327 (381)
T ss_dssp HHH---HHTTHHHHHHHHHHHHHHHHHHHHHHTT--------------CCEECCSBSSEEEEECTTC--C-HHHHHHHTC
T ss_pred hCc---ccHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEecCCCcceEEEEecChH--h-HHHHHHhCC
Confidence 742 0156788889999999999999998743 4455677889999998754 3 777788899
Q ss_pred eeeecCCcccC---CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 219 IIGREGKKFRA---EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 219 i~~~~g~~f~~---~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
|.++||..|+. +.+++|||++.+.+++++++++|++++++
T Consensus 328 i~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 328 VALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVVNS 370 (381)
T ss_dssp EECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred EEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 99999998874 46899999988999999999999988753
No 42
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=6.3e-32 Score=235.56 Aligned_cols=240 Identities=17% Similarity=0.178 Sum_probs=181.9
Q ss_pred CCCcccchhhhhhc----c--Ccc-----c--ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCC
Q 024997 1 MPFYPLYQEQTDYF----E--SVD-----Y--KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGP 59 (259)
Q Consensus 1 ~P~y~~~~~~~~~~----g--~~~-----~--~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~ 59 (259)
+|+|+.|...+... + ..+ . .|.+|+++|+ ++++++++++++||||||.+++ ++|+++
T Consensus 135 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~ 212 (417)
T 3g7q_A 135 APEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQH 212 (417)
T ss_dssp CCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred CCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 47888877665322 1 111 1 3568888888 6778999999999999999972 789999
Q ss_pred CcEEEeecccc--CCC--CCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHH
Q 024997 60 YAKSIYDHAYF--WPH--FAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRA 134 (259)
Q Consensus 60 ~~~vi~De~y~--~~~--~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 134 (259)
|+++|+||+|- .+. .... +...+++++++|+|| ++.+|+|+||++++ +++++.+.......+.+++++.|.++
T Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (417)
T 3g7q_A 213 NIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMM 290 (417)
T ss_dssp TCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHH
T ss_pred CCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHH
Confidence 99999999992 111 1111 234678999999999 57899999999998 79999999988888888999999999
Q ss_pred HHHHHHHHhcCCcchHHH-HHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCC--CchHHH
Q 024997 135 FKLLKVVLEDGGNNIFEF-GYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDKDC 210 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 210 (259)
..+++.. ....+..+ .++.++++++.+.+.|++ ++.+. +....+++|+++|++++. .+.+.+
T Consensus 291 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~~~~~~~~g~~~~~~~~~~~~~~~~l 356 (417)
T 3g7q_A 291 CEMIKRN---DLLRLSETVIKPFYYQRVQQTIAIIRRYLSEER-----------CLIHKPEGAIFLWLWFKDLPITTELL 356 (417)
T ss_dssp HHHHHTT---CHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTT-----------CEEECCCBSSEEEEECTTCSSCHHHH
T ss_pred HHHHcCc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-----------ceeeCCCcceEEEEEcCCCCCCHHHH
Confidence 9999841 11222333 567788888888888876 33211 445678899999999985 245555
Q ss_pred HHHHHHcCeeeecCCcccCC--------CCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 211 YGILKAAKIIGREGKKFRAE--------ARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 211 ~~ll~~~gi~~~~g~~f~~~--------~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.|.++||.++||..|+.+ .+++|||++.+++++++++++|++++++
T Consensus 357 ~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 357 YQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIER 412 (417)
T ss_dssp HHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 56667899999999998753 4799999988999999999999998764
No 43
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=6.9e-32 Score=235.44 Aligned_cols=239 Identities=15% Similarity=0.153 Sum_probs=186.3
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|+++|++.++++++++++++||||||.+++ ++|+++|+++|
T Consensus 135 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 214 (416)
T 1bw0_A 135 QPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLF 214 (416)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999988887652 3568899999999888899999999999999872 78999999999
Q ss_pred eeccc--c--CCC-----CCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCH-HHHHHH----HHhhhhhcCCCCH
Q 024997 65 YDHAY--F--WPH-----FAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDE-AVYQRM----SAYISLNTMGVSR 128 (259)
Q Consensus 65 ~De~y--~--~~~-----~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~~~----~~~~~~~~~~~~~ 128 (259)
+||+| | ... ..++. ...+++++++|+||.++++|+|+||++++++ ++++.+ .... ....++++
T Consensus 215 ~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 293 (416)
T 1bw0_A 215 SDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-MLVCGPCT 293 (416)
T ss_dssp EECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHH-HHHTCSCH
T ss_pred EEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHh-ccccCCCc
Confidence 99999 2 221 22332 2234689999999999999999999999853 243333 3322 13467889
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---- 204 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 204 (259)
+.|.++.++++. ..+.++++.+++++++++.+.+.|+++++ +....+.+|+|+|++++.
T Consensus 294 ~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~ 356 (416)
T 1bw0_A 294 VVQAALGEALLN----TPQEHLDQIVAKIEESAMYLYNHIGECIG-------------LAPTMPRGAMYLMSRIDLEKYR 356 (416)
T ss_dssp HHHHHHHHHHHS----SCHHHHHHHHHHHHHHHHHHHHHHTTSTT-------------EEECCCCBTTEEEEEECGGGBS
T ss_pred HHHHHHHHHHhc----ccHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CcccCCCeeEEEEEeCCHHHcC
Confidence 999999999883 13567888899999999999999987543 444567789999988753
Q ss_pred --Cc-hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 --EE-DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 --~~-~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+ .++...+++++||.++||..|+. ++++|||++.+++++++++++|.+++++
T Consensus 357 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~iRis~~~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 357 DIKTDVEFFEKLLEEENVQVLPGTIFHA-PGFTRLTTTRPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp SCCSHHHHHHHHHHHHCEECEEGGGGTC-TTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCEEEecccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 22 34556666788999999998875 4899999987899999999999998764
No 44
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.2e-31 Score=231.80 Aligned_cols=238 Identities=15% Similarity=0.158 Sum_probs=190.4
Q ss_pred CCCcccchhhhhhccCccc----------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY----------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~----------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~ 62 (259)
+|+|+.|...++..|.++. .|.+|+++|++.+++ ++++++++||||||.++ .++|+++|++
T Consensus 121 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 199 (391)
T 4dq6_A 121 EPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVK 199 (391)
T ss_dssp SSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCE
Confidence 5899999999998887652 134788999999977 99999999999999995 2789999999
Q ss_pred EEeeccc--c--CC-CCCCCCCC----CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh-cCCCCHHHHH
Q 024997 63 SIYDHAY--F--WP-HFAPIPAP----ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-TMGVSRECQL 132 (259)
Q Consensus 63 vi~De~y--~--~~-~~~~~~~~----~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-~~~~~~~~q~ 132 (259)
+|+||+| | .. ...++... .+++++++|+||.+|++|+|+||++++++++.+.+....... ..+++++.|.
T Consensus 200 li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (391)
T 4dq6_A 200 IISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLV 279 (391)
T ss_dssp EEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHH
Confidence 9999999 2 11 12222211 367899999999999999999999998558999888775543 3478889999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCC--Cch-H
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EED-K 208 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 208 (259)
++..+++. .++++++.+++++++++.+.+.|++ +++ +....+++++++|++++. .+. +
T Consensus 280 a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (391)
T 4dq6_A 280 ATEASYNN-----GESWLESFLEYLESNIDFAIKYINENMPK-------------LKVRKPEGTYLLWVDFSALGLSDEE 341 (391)
T ss_dssp HHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHCTT-------------SEECCCSBSSEEEEECGGGCCCHHH
T ss_pred HHHHHHhc-----hHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------CEecCCCccEEEEEEhhhcCCCHHH
Confidence 98888884 4567888899999999999999987 443 555678889999999874 244 4
Q ss_pred HHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+...+++++||.++||..|+. +.+++|+|++.+++++++++++|+++++
T Consensus 342 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 391 (391)
T 4dq6_A 342 LESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAIN 391 (391)
T ss_dssp HHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 444555444999999999985 4689999998899999999999998763
No 45
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2.7e-32 Score=238.63 Aligned_cols=240 Identities=15% Similarity=0.204 Sum_probs=194.5
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCC-CCceEEEEcCCCCCChhhH--------HHhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN--------KAVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~ 62 (259)
+|+|+.+...++..|.++. .|.+|+++|++.++ ++++++++++||||||.++ .++|+++|++
T Consensus 150 ~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~ 229 (421)
T 3l8a_A 150 SPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVI 229 (421)
T ss_dssp ESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCE
T ss_pred CCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 4889999988888877652 24578999999996 7899999999999999885 2789999999
Q ss_pred EEeeccc--c---CCCCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh-hcCCCCHHHHH
Q 024997 63 SIYDHAY--F---WPHFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL-NTMGVSRECQL 132 (259)
Q Consensus 63 vi~De~y--~---~~~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 132 (259)
+|+||+| | +....++. +..++++++.|+||.+|++|+|+||++++++++.+.+...... ...+++++.|.
T Consensus 230 li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~ 309 (421)
T 3l8a_A 230 LVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMI 309 (421)
T ss_dssp EEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHH
T ss_pred EEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHH
Confidence 9999999 2 11122221 2346789999999999999999999999866899988876643 34478899999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---chHH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---EDKD 209 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 209 (259)
++.++++. .++++++.++.++++++.+.+.|+++++ +....+++++++|++++.. ..++
T Consensus 310 a~~aal~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------i~~~~~~~~~~~~v~~~~~~~~~~~l 371 (421)
T 3l8a_A 310 ATQAAFQY-----GKPWLEELKTVIEGNIKLVIKELEAKTK-------------IKVMEPEGTYLVWLDFSAYAIAQPQL 371 (421)
T ss_dssp HHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHCS-------------CEEECCSBSSEEEEECGGGTCCTTHH
T ss_pred HHHHHHhc-----cHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------ceEeCCCeeEEEEEeccccCCCHHHH
Confidence 99999884 5567888999999999999999987643 5567889999999998752 3455
Q ss_pred HHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...+++++||.+.+|..|+. +.+++||+++.+++++++++++|++++++
T Consensus 372 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 421 (421)
T 3l8a_A 372 SEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFGK 421 (421)
T ss_dssp HHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhC
Confidence 66666678999999999985 57999999988999999999999998753
No 46
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=2e-32 Score=238.34 Aligned_cols=238 Identities=17% Similarity=0.225 Sum_probs=190.5
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi 64 (259)
+|+|+.|...++..|.++. +|.+|++.|++.++++++++++++|+||||.++ .++|+++|+++|
T Consensus 132 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 211 (406)
T 1xi9_A 132 GPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 211 (406)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 4899999999888887652 355788999999988899999999999999975 278999999999
Q ss_pred eeccc--c--CCCCCCCCCC-CCC-eEEEeccccccCCCcceEEEEE--ecCH----HHHHHHHHhhhhhcCCCCHHHHH
Q 024997 65 YDHAY--F--WPHFAPIPAP-ADE-ELMIFTISKLTGHAGSRFGWAV--IKDE----AVYQRMSAYISLNTMGVSRECQL 132 (259)
Q Consensus 65 ~De~y--~--~~~~~~~~~~-~~~-~i~~~S~SK~~g~~G~R~G~i~--~~~~----~~~~~~~~~~~~~~~~~~~~~q~ 132 (259)
+||+| + .....++... .++ +++++|+||.+|++|+|+||++ ++ + ++++.+....... .+++++.|.
T Consensus 212 ~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~~l~~~l~~~~~~~-~~~~~~~~~ 289 (406)
T 1xi9_A 212 SDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDP-ENKLSEVREAIDRLARIR-LCPNTPAQF 289 (406)
T ss_dssp EECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECT-TCTTHHHHHHHHHHHHHT-CCSCSHHHH
T ss_pred EEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecC-chhHHHHHHHHHHHHHhh-cCCCHHHHH
Confidence 99999 2 1111111111 567 8999999999999999999999 88 7 8999888776655 778899999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---Cc-hH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EE-DK 208 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 208 (259)
++.++++. ..+++++.++.++++++.+.+.|+++++ +....+.+++++|++++. .+ .+
T Consensus 290 a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (406)
T 1xi9_A 290 AAIAGLTG-----PMDYLKEYMKKLKERRDYIYKRLNEIPG-------------ISTTKPQGAFYIFPKIEVGPWKNDKE 351 (406)
T ss_dssp HHHHHHHS-----CCHHHHHHHHHHHHHHHHHHHHHHTSTT-------------EECCCCCBSSEECCEECSCSCSSHHH
T ss_pred HHHHHHhC-----CcHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CeeecCCeeEEEEEecCccCCCCHHH
Confidence 99999963 3455788889999999999999987643 444567788999988763 23 34
Q ss_pred HHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.++||..|+. +++++|||++.+++++++++++|++++++
T Consensus 352 l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 352 FVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp HHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 455556588999999998874 46899999988899999999999998764
No 47
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=6.9e-32 Score=236.43 Aligned_cols=240 Identities=18% Similarity=0.216 Sum_probs=183.7
Q ss_pred CCCcccchhhh-hhccCcc--------cccccChhhhcccCC------CCceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQT-DYFESVD--------YKFEGEANLWGNASS------DTHLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~-~~~g~~~--------~~~~~d~~~l~~~~~------~~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|+.|...+ ...|.++ .+|.+|+++|++.++ ++++++++++||||||.+++ ++|+
T Consensus 139 ~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 218 (428)
T 1iay_A 139 SPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTN 218 (428)
T ss_dssp SSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHH
Confidence 58899887644 3566654 235678888888774 36888999999999999873 7899
Q ss_pred CCCcEEEeecccc----CC-CCCCCC---CC-------CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh
Q 024997 58 GPYAKSIYDHAYF----WP-HFAPIP---AP-------ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN 122 (259)
Q Consensus 58 ~~~~~vi~De~y~----~~-~~~~~~---~~-------~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~ 122 (259)
++|+++|+||+|. .. ...++. .. .++++++.|+||.+|++|+|+||++++++++++.+......
T Consensus 219 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~- 297 (428)
T 1iay_A 219 QHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF- 297 (428)
T ss_dssp TTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT-
T ss_pred HCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc-
Confidence 9999999999992 11 121211 22 57889999999999999999999999547899888865443
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDG-GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
++++++.|.++..+++.. . .+.++++.++.++++++.+.+.|++++ +.+..+++|+|+|++
T Consensus 298 -~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~~ 359 (428)
T 1iay_A 298 -GLVSTQTQYFLAAMLSDE---KFVDNFLRESAMRLGKRHKHFTNGLEVVG--------------IKCLKNNAGLFCWMD 359 (428)
T ss_dssp -SCCCHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCBCCCSSSSEEEEE
T ss_pred -ccCCHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcccCCCeeEEEEEe
Confidence 568899999998888731 0 123667788899999999999998763 334466689999999
Q ss_pred cCCC-------ch-HHHHHHHHHcCeeeecCCcccC-CCCeEEEEee-cChhhHHHHHHHHHHHhhhC
Q 024997 202 CERE-------ED-KDCYGILKAAKIIGREGKKFRA-EARFVRLSLL-KSQDDFDLLLHRLDELISKE 259 (259)
Q Consensus 202 ~~~~-------~~-~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~-~~~~~~~~~~~~l~~~l~~~ 259 (259)
++.. +. ++...+++++||.+++|..|+. +++++||+++ .+++++++++++|+++++++
T Consensus 360 ~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 360 LRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp CGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred chhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 8752 12 3445555556999999998875 3689999998 49999999999999998764
No 48
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3.5e-32 Score=238.83 Aligned_cols=240 Identities=19% Similarity=0.223 Sum_probs=186.8
Q ss_pred CCCcccchhhhh-hccCccc--------ccccChhhhcccCCC------CceEEEEcCCCCCChhhHH--------Hhhc
Q 024997 1 MPFYPLYQEQTD-YFESVDY--------KFEGEANLWGNASSD------THLVEFVTAPNNPDGQMNK--------AVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~-~~g~~~~--------~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~--------~la~ 57 (259)
+|+|+.+...+. ..|.++. +|.+|+++|++.+++ ++++|++++||||||.+++ ++|+
T Consensus 142 ~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~ 221 (435)
T 3piu_A 142 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVE 221 (435)
T ss_dssp ESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 488998888777 5676652 355788999988843 7899999999999999872 7899
Q ss_pred CCCcEEEeeccc----cCC-CCCCCC---CC---------CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh
Q 024997 58 GPYAKSIYDHAY----FWP-HFAPIP---AP---------ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS 120 (259)
Q Consensus 58 ~~~~~vi~De~y----~~~-~~~~~~---~~---------~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~ 120 (259)
++|+++|+||+| |.. ...++. .. .+++++++|+||.+|++|+|+||++++++++.+.+.....
T Consensus 222 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 301 (435)
T 3piu_A 222 DKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS 301 (435)
T ss_dssp HHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGG
T ss_pred HcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhh
Confidence 999999999999 222 122211 11 5678999999999999999999999965678887776554
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEE
Q 024997 121 LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWV 200 (259)
Q Consensus 121 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (259)
. ..++++.|.++..+++... ..++++.+.+++++++++.+.+.|++++ +....+.+|+++|+
T Consensus 302 ~--~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~g~~~~~ 363 (435)
T 3piu_A 302 F--GLVSSQTQHLLSAMLSDKK--LTKNYIAENHKRLKQRQKKLVSGLQKSG--------------ISCLNGNAGLFCWV 363 (435)
T ss_dssp G--SCCCHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTT--------------CEECCCCSSSEEEE
T ss_pred c--CCCCHHHHHHHHHHhcChH--HHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcccCCCeeEEEEE
Confidence 3 5678899999888887310 0023566778888999999999988653 55567888899999
Q ss_pred ecCCC--------chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 201 KCERE--------EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 201 ~~~~~--------~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+++.. ..++...+++++||.++||..|+. +++++||+++. +++++++++++|++++++
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 364 DMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp ECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred EcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 99753 235566667666999999999874 57899999987 999999999999998763
No 49
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.3e-31 Score=234.16 Aligned_cols=246 Identities=14% Similarity=0.141 Sum_probs=192.8
Q ss_pred CCCcccchhhhhhccCcccc-----cccChhhhcccC--CCCceEEEE-cCCCCCChhhHH--------Hhh-cCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDYK-----FEGEANLWGNAS--SDTHLVEFV-TAPNNPDGQMNK--------AVL-KGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~-----~~~d~~~l~~~~--~~~~~~i~i-~~p~NPtG~~~~--------~la-~~~~~~v 63 (259)
+|+|+.|...++..|.++.. .++|+++|++.+ +++++++++ ++||||||.+++ ++| +++|+++
T Consensus 131 ~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~l 210 (423)
T 3ez1_A 131 VPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTI 210 (423)
T ss_dssp ESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEE
T ss_pred CCCcHHHHHHHHHcCCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEE
Confidence 48999999999999887632 247889999988 578888764 489999999983 677 8999999
Q ss_pred Eeecccc----CC-CCCCCC---------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHH
Q 024997 64 IYDHAYF----WP-HFAPIP---------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRE 129 (259)
Q Consensus 64 i~De~y~----~~-~~~~~~---------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (259)
|+||+|- .. ...... +..+++++++||||. +++|+|+||++++ +++++.+.........+++++
T Consensus 211 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~ 288 (423)
T 3ez1_A 211 FADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASS-EDNIRWLSKYLGAQSIGPNKV 288 (423)
T ss_dssp EEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEEC-HHHHHHHHHHHHHSCSCCCHH
T ss_pred EEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeC-HHHHHHHHHHHhhhccCCCHH
Confidence 9999992 11 111111 256789999999999 5699999999999 799999999888788899999
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCCchH
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDK 208 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
.|.++..+++.+. +....++.+.++.++++++.+.+.|.+ ++.+. . .+.+..|.+|+|+|++++..+.+
T Consensus 289 ~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~--------~-~~~~~~p~~g~~~~~~~~~~~~~ 358 (423)
T 3ez1_A 289 EQARHVKFLTEYP-GGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGG--------E-YATWTLPKGGYFISLDTAEPVAD 358 (423)
T ss_dssp HHHHHHHHHHHST-THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT--------S-SEEECCCSBSSCEEEEESSSCHH
T ss_pred HHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC--------C-ceEEeCCCccEEEEEECCCCcHH
Confidence 9999999998410 012356777888888888888888764 22110 0 13445788999999999865667
Q ss_pred HHHHHHHHcCeeeec-CCcccC----CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGRE-GKKFRA----EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~-g~~f~~----~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
.+.++++++||.++| |..|+. .++++|||++. +++++++++++|++++++
T Consensus 359 ~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 359 RVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp HHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 777888899999999 777752 46899999987 999999999999998763
No 50
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.4e-31 Score=231.58 Aligned_cols=239 Identities=13% Similarity=0.113 Sum_probs=186.6
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH--------HHhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN--------KAVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~--------~~la~~~~~~ 62 (259)
+|+|+.|...++..|.++. .|.+|+++|++.+++ +++++++++||||||.++ .++|+++|++
T Consensus 118 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 197 (390)
T 1d2f_A 118 TPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVR 197 (390)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCE
T ss_pred CCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCE
Confidence 4899999999888887652 245888999998865 789989999999999986 2789999999
Q ss_pred EEeeccc--c--C-CCCCCCCCCCCC--eEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh-hhcC-CCCHHHHHH
Q 024997 63 SIYDHAY--F--W-PHFAPIPAPADE--ELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS-LNTM-GVSRECQLR 133 (259)
Q Consensus 63 vi~De~y--~--~-~~~~~~~~~~~~--~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~-~~~~-~~~~~~q~~ 133 (259)
+|+||+| | . ....++...... .. ++|+||.+|++|+|+||++++++++++.+..... ..+. +++++.|.+
T Consensus 198 li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 276 (390)
T 1d2f_A 198 VISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA 276 (390)
T ss_dssp EEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHH
T ss_pred EEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHH
Confidence 9999999 2 1 112222222111 34 9999999999999999999865688888887665 3443 788999998
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCC--CchH-H
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDK-D 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~ 209 (259)
+.++++. .++++++.++.++++++.+.+.|++ +++ +....+.+++++|++++. .+.. +
T Consensus 277 ~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (390)
T 1d2f_A 277 HIAAYQQ-----GAPWLDALRIYLKDNLTYIADKMNAAFPE-------------LNWQIPQSTYLAWLDLRPLNIDDNAL 338 (390)
T ss_dssp HHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHCSS-------------CCCCCCSBCSEEEEECGGGCCCHHHH
T ss_pred HHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------CEEecCCccEEEEEEccccCCCHHHH
Confidence 8888873 3567888899999999999999987 543 334567788999999875 2344 4
Q ss_pred HHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...+++++||.++||..|+. +++++|||++.+++++++++++|.+++++
T Consensus 339 ~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 339 QKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp HHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 44445478999999999874 46899999988889999999999998764
No 51
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.98 E-value=5e-32 Score=237.24 Aligned_cols=242 Identities=13% Similarity=0.103 Sum_probs=188.9
Q ss_pred CCCcccchhhhhhccCccccc-----ccChhhhcccCCC--------CceEE-EEcCCCCCChhhHH--------HhhcC
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-----EGEANLWGNASSD--------THLVE-FVTAPNNPDGQMNK--------AVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-----~~d~~~l~~~~~~--------~~~~i-~i~~p~NPtG~~~~--------~la~~ 58 (259)
+|+|+.|...++..|.++..+ .+|+++|++.+++ ++++| ++++||||||.+++ ++|++
T Consensus 140 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~ 219 (425)
T 1vp4_A 140 DPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEK 219 (425)
T ss_dssp ESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 489999999998888776333 3678888888754 67886 57999999999872 78999
Q ss_pred CCcEEEeeccc--c--CCC-CCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH
Q 024997 59 PYAKSIYDHAY--F--WPH-FAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 59 ~~~~vi~De~y--~--~~~-~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
+|+++|+||+| | ... ..++. +..+++++++|+||.+| +|+|+||++++ +++++.+.......+.+++++.|
T Consensus 220 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 297 (425)
T 1vp4_A 220 YDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITH 297 (425)
T ss_dssp TTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHH
T ss_pred cCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHH
Confidence 99999999999 2 111 12221 23467999999999999 99999999999 79999998877766778899999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc-CCCccccccccccccceeeCCCCCeeEEEecCCC-c-hH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS-NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E-DK 208 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 208 (259)
.++.++++.. ..++++.+.++.++++++.+.+.|+++ +.. + .+....+.+|+|+|++++.. + .+
T Consensus 298 ~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-----~-----g~~~~~~~~g~~~~~~~~~~~~~~~ 364 (425)
T 1vp4_A 298 RLAARYLERY---DLLEQLKPTIELYRRKRTVMLNALEEYFSDI-----P-----GVKWVKSEGGLFIWLTLPEGFDTWE 364 (425)
T ss_dssp HHHHHHHHHS---CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTS-----T-----TCEECCCSBSSEEEEECCTTCCTTT
T ss_pred HHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----C-----ceEEecCCccEEEEEEcCCCCCHHH
Confidence 9999999841 124677888999999999999999864 210 0 04445678899999999742 2 44
Q ss_pred HHHHHHHHcCeeeecCCcccC---CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA---EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~---~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+...++ ++||.++||..|+. +++++|||++. +++++++++++|++++++
T Consensus 365 l~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 365 MFEYAK-RKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp THHHHH-HHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 555555 45999999998864 36899999987 789999999999988753
No 52
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.98 E-value=2.7e-31 Score=231.39 Aligned_cols=238 Identities=17% Similarity=0.203 Sum_probs=187.9
Q ss_pred CCCcccchhhhhhccCccccccc------C-hhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEG------E-ANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~------d-~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++..+.. + +++|++.++++++++++++||||||.++ .++|+++|+++|+
T Consensus 133 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 133 EPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp ESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 48999999998888876532222 1 6788888888899999999999999875 2889999999999
Q ss_pred eccc--c--CCCCCC-CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 66 DHAY--F--WPHFAP-IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 66 De~y--~--~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
||+| + .....+ +.+..+++++++|+||.+|++|+|+||++++++++++.+.......+ +++++.|.++.++++.
T Consensus 213 Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~ 291 (409)
T 2gb3_A 213 DEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNL 291 (409)
T ss_dssp ECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC
T ss_pred ECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc
Confidence 9999 2 111222 22234679999999999999999999999994389999888776655 8899999999888862
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccee-eCCCCCeeEEEecCCCch-HHHHHHHHH--
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKK-IRPPSPAYAWVKCEREED-KDCYGILKA-- 216 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ll~~-- 216 (259)
...++++.++.++++++.+.+.|++++ +.. ..+.+++++|++++..+. ++...++++
T Consensus 292 -----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 352 (409)
T 2gb3_A 292 -----DDSFFDFVRETYRERVETVLKKLEEHG--------------LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFN 352 (409)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCC
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHHcC--------------ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccc
Confidence 356788889999999999999998763 333 467789999999873334 444555544
Q ss_pred ---cCeeeecCCcccC----CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 217 ---AKIIGREGKKFRA----EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ---~gi~~~~g~~f~~----~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+||.++||..|+. +++++||+++.+++++++++++|++++++
T Consensus 353 ~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 353 MDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp BTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 4999999998864 36899999988999999999999988753
No 53
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.98 E-value=1.2e-30 Score=223.62 Aligned_cols=230 Identities=17% Similarity=0.236 Sum_probs=186.8
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCC--CcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGP--YAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~--~~~vi~De 67 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++++++++++++||||||.+++ ++++.+ |+++|+||
T Consensus 115 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De 194 (363)
T 3ffh_A 115 TPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDE 194 (363)
T ss_dssp ESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEEC
T ss_pred CCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeC
Confidence 4889999999988887652 4677899999999889999999999999999983 666665 99999999
Q ss_pred cc--cC-CCCCC---CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHH
Q 024997 68 AY--FW-PHFAP---IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVV 141 (259)
Q Consensus 68 ~y--~~-~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 141 (259)
+| |. ..... .....+++++++|+||.+|++|+|+||++++ +++++.+..... .++++++.|.++..+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~-- 269 (363)
T 3ffh_A 195 AYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD-KEIIRQLNIVRP--PFNTTSIGQKLAIEAIK-- 269 (363)
T ss_dssp TTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC-HHHHHHHHHTCC--SCCCBHHHHHHHHHHHH--
T ss_pred chHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhc--
Confidence 99 32 11111 1135678999999999999999999999998 799999988765 46789999999999998
Q ss_pred HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeee
Q 024997 142 LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIG 221 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~ 221 (259)
..+++.+.+++++++++.+.+.|+++.+ +... +..+.|+|++++. +.+.+.+.|.++||.+
T Consensus 270 ----~~~~~~~~~~~~~~~~~~l~~~l~~~~g-------------~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v 330 (363)
T 3ffh_A 270 ----DQAFIGECRTSNANGIKQYEAFAKRFEK-------------VKLY-PANGNFVLIDLGI-EAGTIFSYLEKNGYIT 330 (363)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHCTT-------------CEEC-CCCSSEEEEECSS-CHHHHHHHHHHTTEEC
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------ceEC-CCCCeEEEEECCC-CHHHHHHHHHHCCeEE
Confidence 3367888999999999999999987443 3333 4456788999976 4455555566789999
Q ss_pred ecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 222 REGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 222 ~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
++|..|+. ++++|||++ ++++++++++.|++++
T Consensus 331 ~~g~~~~~-~~~iRis~~-~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 331 RSGAALGF-PTAVRITIG-KEEDNSAVIALLEKLL 363 (363)
T ss_dssp EETTTTTC-TTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred EeCccCCC-CCeEEEECC-CHHHHHHHHHHHHHhC
Confidence 99999876 589999996 8899999999998864
No 54
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.98 E-value=2.7e-31 Score=227.90 Aligned_cols=230 Identities=15% Similarity=0.245 Sum_probs=188.3
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH--------HHhhcCC--CcEE
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN--------KAVLKGP--YAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~--------~~la~~~--~~~v 63 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++ +++++++++||||||.++ .++|+++ |+++
T Consensus 116 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~l 195 (367)
T 3euc_A 116 VPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLV 195 (367)
T ss_dssp ESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEE
T ss_pred CCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEE
Confidence 4899999999998888752 357889999999876 899999999999999986 2779999 9999
Q ss_pred Eeeccc--cC-CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHH
Q 024997 64 IYDHAY--FW-PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 64 i~De~y--~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 140 (259)
|+||+| |. .......+..+++++++|+||. +++|+|+||++++ +++++.+..... .++++++.|.++..+++
T Consensus 196 i~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~- 270 (367)
T 3euc_A 196 VVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD-PQWLEQLDKVRP--PYNVNVLTEATALFALE- 270 (367)
T ss_dssp EEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC-HHHHHHHGGGCC--SSCCCHHHHHHHHHHHT-
T ss_pred EEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhc-
Confidence 999999 32 1221222456789999999999 8999999999998 799998877655 36789999999999987
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCee
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKII 220 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 220 (259)
..+++.+.+++++++++.+.+.|+++++ +. ..+.++.|+|++++ +.+.+.+.|.++||.
T Consensus 271 -----~~~~~~~~~~~~~~~~~~l~~~l~~~~g-------------~~-~~~~~~~~~~~~~~--~~~~l~~~l~~~gi~ 329 (367)
T 3euc_A 271 -----HVAVLDEQAAQLRAERSRVAEGMAAHGG-------------VT-VFPSAANFLLARVP--DAAQTFDRLLARKVL 329 (367)
T ss_dssp -----THHHHHHHHHHHHHHHHHHHHHHHTSTT-------------CE-ECCCSSSEEEEECS--CHHHHHHHHHTTTEE
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------cE-ECCCCCeEEEEECC--CHHHHHHHHHHCCeE
Confidence 2467888899999999999999987643 33 34567889999987 455566667789999
Q ss_pred eecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 221 GREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 221 ~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
+++|..|+. ..+++|||++ ++++++++++.|+++++
T Consensus 330 v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 330 IKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp CEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred EEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 999998864 4689999996 88999999999999875
No 55
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.97 E-value=6.4e-31 Score=225.45 Aligned_cols=230 Identities=18% Similarity=0.206 Sum_probs=184.8
Q ss_pred CCCcccchhhhhhccCcccccc------cChhhhcccCCCCceEEEEcCCCCCChhhHH-----Hhhc--CCCcEEEeec
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE------GEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLK--GPYAKSIYDH 67 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~--~~~~~vi~De 67 (259)
+|+|+.|...++..|.++..+. +|+++|++.++++++++++++||||||.+++ ++++ ++|+++|+||
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De 192 (365)
T 3get_A 113 GVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDA 192 (365)
T ss_dssp SSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEEC
T ss_pred CCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeC
Confidence 5899999999988887653322 7888999999989999999999999999982 4554 6799999999
Q ss_pred cc--cC---CCCCCCC-----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 68 AY--FW---PHFAPIP-----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 68 ~y--~~---~~~~~~~-----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
+| |. ....... +..+++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 269 (365)
T 3get_A 193 AYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN-ANIISAFYKLRAP--FNVSNLALKAAVAA 269 (365)
T ss_dssp TTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC-HHHHHHHHHHSCT--TCSCHHHHHHHHHH
T ss_pred ccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC-HHHHHHHHHhcCC--CCcCHHHHHHHHHH
Confidence 99 21 2111111 23578999999999999999999999998 7999999887664 56899999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA 217 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 217 (259)
++ ...++++.+++++++++.+.+.|++++ +...+ ..+.|+|++++..+.+.+.+.|.++
T Consensus 270 l~------~~~~~~~~~~~~~~~~~~l~~~l~~~g--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (365)
T 3get_A 270 MD------DDEFTEKTLENNFSQMELYKEFAKKHN--------------IKIID-SYTNFITYFFDEKNSTDLSEKLLKK 328 (365)
T ss_dssp HT------CHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CEECC-CSSSEEEEECSSSCHHHHHHHHHTT
T ss_pred hC------CHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEECC-CCCeEEEEECCCCCHHHHHHHHHHC
Confidence 88 336788899999999999999998763 33333 4466789999764445555556678
Q ss_pred CeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 218 KIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 218 gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
||.++||..|+ ++++|||++ ++++++++++.|+++++
T Consensus 329 gi~v~~g~~~~--~~~iRis~~-~~~~i~~l~~~l~~~l~ 365 (365)
T 3get_A 329 GIIIRNLKSYG--LNAIRITIG-TSYENEKFFTEFDKILR 365 (365)
T ss_dssp TEECEECGGGT--CSEEEEECC-CHHHHHHHHHHHHHHHC
T ss_pred CEEEEECccCC--CCEEEEEcC-CHHHHHHHHHHHHHHhC
Confidence 99999999998 689999996 78999999999998763
No 56
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=1.2e-30 Score=221.22 Aligned_cols=227 Identities=16% Similarity=0.148 Sum_probs=176.5
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y 69 (259)
+|+|+.|...++..|.++. ++.+|+++|++. .+++++++++||||||.+++ ++|++++. +|+||+|
T Consensus 97 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~ 173 (337)
T 3p1t_A 97 WPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETY 173 (337)
T ss_dssp SSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTT
T ss_pred CCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCC
Confidence 5899999999998887652 357788888876 56789999999999999983 78888887 5669999
Q ss_pred --cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCc
Q 024997 70 --FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGN 147 (259)
Q Consensus 70 --~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 147 (259)
|...........+++++++|+||.+|++|+|+||++++ +++++.+..... ..+++.+.|.++..+++. .
T Consensus 174 ~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~------~ 244 (337)
T 3p1t_A 174 VDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP-SELIAAMKRKQW--FCNVGTLDLHALEAALDN------D 244 (337)
T ss_dssp GGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECC-HHHHHHHHTTSC--TTCSCHHHHHHHHHHHTC------H
T ss_pred hhhccccccccccCCCEEEEeeCchhccCcchheEEEEeC-HHHHHHHHhhcC--CCCCCHHHHHHHHHHhCC------H
Confidence 32222222244578999999999999999999999999 799998877654 366888999988888872 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcc
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f 227 (259)
....+.++++.++++.+.+.|++++ +...++.+ .|+|+.... .+.+.+.|+++||.++||..|
T Consensus 245 ~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~-~~~~~~~~~--~~~~~~~l~~~gi~v~~g~~~ 307 (337)
T 3p1t_A 245 RAREAHIAKTLAQRRRVADALRGLG--------------YRVASSEA-NFVLVENAA--GERTLRFLRERGIQVKDAGQF 307 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--------------CCBCCCSS-SEEEEECTT--THHHHHHHHHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCc--------------CEECCCCC-eEEEEEcCC--HHHHHHHHHHCCeEEEECccC
Confidence 3566677788888899999998763 33334444 455666543 355667778899999999999
Q ss_pred cCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 228 RAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 228 ~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+. ++++|||++ ++++++.+++.|+++.++
T Consensus 308 ~~-~~~iRis~~-~~~~~~~l~~al~~~~~~ 336 (337)
T 3p1t_A 308 GL-HHHIRISIG-REEDNDRLLAALAEYSDH 336 (337)
T ss_dssp TC-CSEEEEECC-CHHHHHHHHHHHHHHTC-
T ss_pred CC-CCeEEEecC-CHHHHHHHHHHHHHHhhc
Confidence 76 489999996 688899999999888754
No 57
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=3.4e-31 Score=232.13 Aligned_cols=239 Identities=14% Similarity=0.088 Sum_probs=184.1
Q ss_pred CCCcccchhhhhh-ccCccc-------ccccChhhhcccCCC---CceEEEEcCCCCCChhhHH--------HhhcC---
Q 024997 1 MPFYPLYQEQTDY-FESVDY-------KFEGEANLWGNASSD---THLVEFVTAPNNPDGQMNK--------AVLKG--- 58 (259)
Q Consensus 1 ~P~y~~~~~~~~~-~g~~~~-------~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~~--------~la~~--- 58 (259)
+|+|+.|...++. .|.++. .|.+|+++|++.+++ +++++++++||||||.+++ ++|++
T Consensus 144 ~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 223 (430)
T 2x5f_A 144 EHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALAN 223 (430)
T ss_dssp SSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhh
Confidence 5899999999988 877652 256888889888854 7899999999999999872 78889
Q ss_pred --CCcEEEeeccc--c--CCC-CCCC----CCCCCC---eEEEeccccccCCCcceEEEEEe---cCHHHHHHHHHhhhh
Q 024997 59 --PYAKSIYDHAY--F--WPH-FAPI----PAPADE---ELMIFTISKLTGHAGSRFGWAVI---KDEAVYQRMSAYISL 121 (259)
Q Consensus 59 --~~~~vi~De~y--~--~~~-~~~~----~~~~~~---~i~~~S~SK~~g~~G~R~G~i~~---~~~~~~~~~~~~~~~ 121 (259)
+|+++|+||+| | ... ..++ .+..++ +++++|+||.+|++|+|+||+++ + +++++.+......
T Consensus 224 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~-~~~~~~l~~~~~~ 302 (430)
T 2x5f_A 224 KGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSD-QTTKEVLEAKVKG 302 (430)
T ss_dssp TTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCC-HHHHHHHHHHHHH
T ss_pred ccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCC-HHHHHHHHHHHhh
Confidence 99999999999 2 111 1222 123567 89999999999999999999999 7 7999998876655
Q ss_pred ----hcCCCCHHHHHHHHHHHH-HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCe
Q 024997 122 ----NTMGVSRECQLRAFKLLK-VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPA 196 (259)
Q Consensus 122 ----~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (259)
.+.+++++.|.++.++++ .. ...+.+.+.+++++++++.+.+.|++.. .+. .+....+++|+
T Consensus 303 ~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~-------~~~---g~~~~~~~~g~ 369 (430)
T 2x5f_A 303 LIRSNISSGPLPTQSAVKHVLKNNK---QFDKEIEQNIQTLKERYEVTKEVVYADQ-------YHS---HWQAYDFNSGY 369 (430)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHHSCH---HHHHHHHHHHHHHHHHHHHHHHHHTCGG-------GTT---TEEECCCCBSS
T ss_pred hhhcccCCCChHHHHHHHHHHccCh---HHHHHHHHHHHHHHHHHHHHHHHHHhhC-------CCC---CceeeCCCceE
Confidence 567899999999999987 52 0122344488889999999998887321 000 04556788899
Q ss_pred eEEEecCCCch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEee-cChhhHHHHHHHHHHHhhh
Q 024997 197 YAWVKCEREED-KDCYGILKAAKIIGREGKKFRAEARFVRLSLL-KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 197 ~~~~~~~~~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-~~~~~~~~~~~~l~~~l~~ 258 (259)
|+|++++..+. ++...+++++||.++|| +++++|||++ .+++++++++++|++++++
T Consensus 370 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g-----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 370 FMAIKVHDVDPEALRKHLIDKYSIGVIAL-----NATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp EEEEEESSSCHHHHHHHHHHHHCEECEEC-----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHhCCEEEecC-----CCCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99999874344 44555554489999997 3579999998 5889999999999998763
No 58
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.97 E-value=1.3e-30 Score=222.62 Aligned_cols=230 Identities=17% Similarity=0.198 Sum_probs=184.3
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCC--CCceEEEEcCCCCCChhhHH-----Hhhc--CCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASS--DTHLVEFVTAPNNPDGQMNK-----AVLK--GPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~--~~~~~i~i~~p~NPtG~~~~-----~la~--~~~~~vi~ 65 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++ ++++++++++||||||.+++ ++++ ++|+++|+
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~ 178 (354)
T 3ly1_A 99 ELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIV 178 (354)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEE
T ss_pred CCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEE
Confidence 5899999999998887652 46778999999986 78999999999999999872 4444 49999999
Q ss_pred eccc--c--CCCCCCCC---CCC-CCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHH
Q 024997 66 DHAY--F--WPHFAPIP---APA-DEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKL 137 (259)
Q Consensus 66 De~y--~--~~~~~~~~---~~~-~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 137 (259)
||+| | .....+.. ... +++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++..+
T Consensus 179 De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~ 255 (354)
T 3ly1_A 179 DEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-PTVIALMGRYVAG--EKINFSGVDAALAS 255 (354)
T ss_dssp ECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC-HHHHHHHGGGTTC--SCCCHHHHHHHHHH
T ss_pred eccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC-HHHHHHHHHhcCC--CCCCHHHHHHHHHH
Confidence 9999 2 22111211 233 78999999999999999999999998 7999999887765 68899999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHc
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAA 217 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 217 (259)
++. ..++.+.+++++++++.+.+.|++++ +... +..|.|+|++++. +.+.+.+.|.++
T Consensus 256 l~~------~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~~ 313 (354)
T 3ly1_A 256 MND------SAFITYSKKSNDVSRQILLKALEDLK--------------LPYL-PSEGNFVFHQLVV-PLKDYQTHMADA 313 (354)
T ss_dssp TTC------HHHHHHHHHHHHHHHHHHHHHHHHHT--------------CCBC-CCCSSEEEEECSS-CHHHHHHHHHHT
T ss_pred hcC------HHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeEC-CCCceEEEEECCC-CHHHHHHHHHHC
Confidence 873 36788899999999999999998763 3333 4457789999976 445555556678
Q ss_pred CeeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
||.++ |..++ .++++|||++ +++++++++++|++++++
T Consensus 314 gi~v~-g~~~~-~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 314 GVLIG-RAFPP-ADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp TEECC-CCCTT-CTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred CEEEe-ecCCC-CCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 99998 66444 5689999996 789999999999999876
No 59
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.97 E-value=2e-31 Score=231.30 Aligned_cols=238 Identities=14% Similarity=0.158 Sum_probs=186.8
Q ss_pred CCCcccchhhhhhccCccccc-----ccChhhhcccCCC-CceEE-EEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-----EGEANLWGNASSD-THLVE-FVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-----~~d~~~l~~~~~~-~~~~i-~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++..+ .+|+++|++.+++ +++++ ++++||||||.+++ ++|+++|+++|+
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 122 APSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp ESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCcHHHHHHHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 489999999988888766332 3688889888854 67776 57999999999872 788999999999
Q ss_pred eccc--cC--CC-CCCCC--CCC---CCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHH
Q 024997 66 DHAY--FW--PH-FAPIP--APA---DEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAF 135 (259)
Q Consensus 66 De~y--~~--~~-~~~~~--~~~---~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 135 (259)
||+| +. .. ..++. +.. +++++++|+||.+| +|+|+||++++ +++++.+.........+++++.|.++.
T Consensus 202 De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~ 279 (397)
T 2zyj_A 202 DDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVH 279 (397)
T ss_dssp ECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred eCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 9999 21 11 11221 122 67899999999999 99999999999 799999988777667788999999998
Q ss_pred HHHHHHHhcCCc-chHHHHHHHHHHHHHHHHHHHHhc-C-CCccccccccccccceeeCCCCCeeEEEecCC-CchHHHH
Q 024997 136 KLLKVVLEDGGN-NIFEFGYNTMKKRWENLSKIISLS-N-RFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-EEDKDCY 211 (259)
Q Consensus 136 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 211 (259)
++++. .. +++++.++.++++++.+.+.|++. + + +....+.+|+++|++++. .+.+.+.
T Consensus 280 ~~l~~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g-------------~~~~~~~~g~~~~~~~~~~~~~~~~~ 341 (397)
T 2zyj_A 280 ELLKE-----GFSERLERVRRVYREKAQAMLHALDREVPKE-------------VRYTRPKGGMFVWMELPKGLSAEGLF 341 (397)
T ss_dssp HHHTT-----THHHHHHHHHHHHHHHHHHHHHHHHHHSCTT-------------SEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred HHHHh-----CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------------eEEccCCccEEEEEEcCCCCCHHHHH
Confidence 88873 22 567888889999999999999863 3 1 344567789999999974 2344444
Q ss_pred HHHHHcCeeeecCCcccC---CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRA---EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~---~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+.|.++||.++||..|+. +++++|||++. +++++++++++|.+++++
T Consensus 342 ~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 342 RRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp HHHHHTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 455567999999998863 46899999987 789999999999988753
No 60
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.97 E-value=5.8e-31 Score=228.69 Aligned_cols=236 Identities=21% Similarity=0.198 Sum_probs=175.7
Q ss_pred CCCcccchhhhhhccCc-ccccccChh-hhcccCC--CCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESV-DYKFEGEAN-LWGNASS--DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~-~~~~~~d~~-~l~~~~~--~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.+ +..+..+.+ .+...+. ++++++++++||||||.+++ ++|+++|+++|+||+
T Consensus 125 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 204 (400)
T 3asa_A 125 DPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAA 204 (400)
T ss_dssp ESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCcHHHHHHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEch
Confidence 48999999988888877 544433321 1111121 56889899999999999872 678999999999999
Q ss_pred c--cC--CC-CCCCCC---CCCCeEEEeccccccCCCcceEEEEEecCHHH-------HHHHHHhhhhh-cCCCCHHHHH
Q 024997 69 Y--FW--PH-FAPIPA---PADEELMIFTISKLTGHAGSRFGWAVIKDEAV-------YQRMSAYISLN-TMGVSRECQL 132 (259)
Q Consensus 69 y--~~--~~-~~~~~~---~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~-------~~~~~~~~~~~-~~~~~~~~q~ 132 (259)
| |. +. ...+.. ..+++++++|+||.+|++|+|+||++++ +++ ++.+....... ..+++++.|.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (400)
T 3asa_A 205 YSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIP-QELTYADGHFVIQDWERFLSTTFNGASIPAQE 283 (400)
T ss_dssp TGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECC-TTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHH
T ss_pred hhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeC-hhhccchhhhHHHHHHHHhccCccCCChHHHH
Confidence 9 31 21 112221 2357899999999999999999999998 477 56654433222 3468999999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe-cCCC-c-hHH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK-CERE-E-DKD 209 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~ 209 (259)
++..+++. . ++++.++.++++++.+.+.|++++ +....+.+++|+|++ ++.. + .++
T Consensus 284 a~~~~l~~-----~--~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (400)
T 3asa_A 284 AGVAGLSI-----L--PQLEAIHYYRENSDLLRKALLATG--------------FEVFGGEHAPYLWVKPTQANISDRDL 342 (400)
T ss_dssp HHHHHHHH-----T--TTCHHHHHHHHHHHHHHHHHHHTT--------------CEEEECSSSSEEEEECCCTTCCTTTH
T ss_pred HHHHHhCc-----H--HHHHHHHHHHHHHHHHHHHHHHCC--------------CeeeCCCCceEEEEeccCCCCCHHHH
Confidence 99988884 2 567788999999999999998753 444566788999999 7642 2 466
Q ss_pred HHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...+++++||.++||..|+. +++++|||+..+++++++++++|++++++
T Consensus 343 ~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 343 FDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp HHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC----
T ss_pred HHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 77777778999999999874 46899999766999999999999988753
No 61
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.97 E-value=5.4e-31 Score=229.98 Aligned_cols=235 Identities=12% Similarity=0.070 Sum_probs=178.5
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCC----Cce-EEEEcCC-CCCChhhHH--------Hhhc--
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSD----THL-VEFVTAP-NNPDGQMNK--------AVLK-- 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~----~~~-~i~i~~p-~NPtG~~~~--------~la~-- 57 (259)
+|+|+.|...++..|.++. .|.+|++.|++.+++ +++ ++++++| |||||.+++ ++|+
T Consensus 133 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~ 212 (418)
T 3rq1_A 133 DWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDL 212 (418)
T ss_dssp SSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 5899999999999888652 247788889888853 454 8899999 999999983 5666
Q ss_pred ----CCCcEEEeeccc--cCCC---CCC----CCCCCCC--eEEEeccccccCCCcceEEEEEe---cCHHHHHHHHHhh
Q 024997 58 ----GPYAKSIYDHAY--FWPH---FAP----IPAPADE--ELMIFTISKLTGHAGSRFGWAVI---KDEAVYQRMSAYI 119 (259)
Q Consensus 58 ----~~~~~vi~De~y--~~~~---~~~----~~~~~~~--~i~~~S~SK~~g~~G~R~G~i~~---~~~~~~~~~~~~~ 119 (259)
++|+++|+||+| |... ..+ ..+..++ +++++||||.+|++|+|+||+++ + +++++.+....
T Consensus 213 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-~~~~~~~~~~~ 291 (418)
T 3rq1_A 213 VAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDD-EEIADEFFEVN 291 (418)
T ss_dssp HHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESS-HHHHHHHHHHH
T ss_pred hhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCC-HHHHHHHHHHH
Confidence 999999999999 3211 111 1233445 58899999999999999999998 6 79999888765
Q ss_pred hhh----cCCCCHHHHHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC
Q 024997 120 SLN----TMGVSRECQLRAFKLLKVVLE-DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS 194 (259)
Q Consensus 120 ~~~----~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (259)
... ..+++.+.|.++..+++.... +.......+.++.++++++.+.+.|++++ +.+..+++
T Consensus 292 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~ 357 (418)
T 3rq1_A 292 KSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG--------------LPMLPYRG 357 (418)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------------CCCCCCCS
T ss_pred HHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCCCCCCc
Confidence 432 246889999998888863100 00112334567788899999999888763 44567889
Q ss_pred CeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 195 PAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
++|+|+++. +.+.+.+.|.++||.++|| ++++|||++. +++++++++++|++++++
T Consensus 358 ~~~~~~~~~--~~~~~~~~l~~~gi~v~~g------~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 358 GFFITIPTD--SANAICEELKKEHIYVIAL------ANGIRIAACGIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp SSEEEEECT--THHHHHHHHHHTTEECEEC------SSEEEEEGGGSCHHHHTTHHHHHHHHHHH
T ss_pred eEEEEcCCC--CHHHHHHHHHhCCEEEecC------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 999999885 3444556778899999996 3689999986 999999999999998864
No 62
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=1.2e-30 Score=229.45 Aligned_cols=242 Identities=17% Similarity=0.192 Sum_probs=184.5
Q ss_pred CCCcccchhhh------hhccCccc-----------ccccChhhhccc---CCCCceEEEEcCCCCCChhhHH-------
Q 024997 1 MPFYPLYQEQT------DYFESVDY-----------KFEGEANLWGNA---SSDTHLVEFVTAPNNPDGQMNK------- 53 (259)
Q Consensus 1 ~P~y~~~~~~~------~~~g~~~~-----------~~~~d~~~l~~~---~~~~~~~i~i~~p~NPtG~~~~------- 53 (259)
+|+|+.|...+ ...|..+. .|.+|+++|++. ++++++++++++||||||.+++
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 231 (444)
T 3if2_A 152 TPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHL 231 (444)
T ss_dssp SSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHH
Confidence 47888887743 22333321 256899999988 6788999999999999999872
Q ss_pred -HhhcCCCcEEEeecccc--CCC--CCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCC
Q 024997 54 -AVLKGPYAKSIYDHAYF--WPH--FAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVS 127 (259)
Q Consensus 54 -~la~~~~~~vi~De~y~--~~~--~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~ 127 (259)
++|+++|+++|+||+|- .+. +... ....+++++++|+||+ +++|+|+||++++ +++++.+.......+.+++
T Consensus 232 ~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~ 309 (444)
T 3if2_A 232 AEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVAD-AKVIEAVSAMNAVVNLAPT 309 (444)
T ss_dssp HHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEECC-HHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCCCceEEEEEC-HHHHHHHHHHHHhccCCCC
Confidence 78999999999999992 111 1111 1345789999999997 7899999999998 7999999988887778899
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHH-HHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCC-
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEF-GYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER- 204 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (259)
++.|.++..+++.. ....+..+ .++.++++++.+.+.|++ ++.+. +....+.+|+++|++++.
T Consensus 310 ~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~~~~~~~~g~~~~~~~~~~ 375 (444)
T 3if2_A 310 RFGAAIATPLVAND---RIKQLSDNEIKPFYQKQATLAVKLLKQALGDYP-----------LMIHKPEGAIFLWLWFKDL 375 (444)
T ss_dssp CHHHHHHHHHHHTS---HHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSS-----------EEEECCCBSSEEEEEETTC
T ss_pred hHHHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-----------ceEecCCccEEEEEEcCCC
Confidence 99999999998841 11122333 566788888888888875 33211 345578889999999875
Q ss_pred -CchHHHHHHHHHcCeeeecCCcccCC---------CCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 205 -EEDKDCYGILKAAKIIGREGKKFRAE---------ARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 205 -~~~~~~~~ll~~~gi~~~~g~~f~~~---------~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+.+...|.++||.++||+.|..+ .+++|||++.+++++++++++|.+++++
T Consensus 376 ~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 376 PISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp SSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 34555566667899999999998642 2689999988999999999999988753
No 63
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.97 E-value=3e-31 Score=231.03 Aligned_cols=235 Identities=11% Similarity=-0.013 Sum_probs=180.4
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC---CCceEEEEcCCCCCChhhHH--------HhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMNK--------AVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~--------~la~~~~~ 61 (259)
+|+|+.|...++..|.++. ++.+|+++|++.++ +.++++++++||||||.+++ ++|+++|+
T Consensus 138 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 217 (409)
T 4eu1_A 138 DVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNH 217 (409)
T ss_dssp SSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 5999999999999988652 35778899998883 46778788999999999982 78999999
Q ss_pred EEEeeccc--c--CC---CCCCC---CCCCCCeEEEeccccccCCCcceEEEE--EecCHH----HHHHHHHhhhhhcCC
Q 024997 62 KSIYDHAY--F--WP---HFAPI---PAPADEELMIFTISKLTGHAGSRFGWA--VIKDEA----VYQRMSAYISLNTMG 125 (259)
Q Consensus 62 ~vi~De~y--~--~~---~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i--~~~~~~----~~~~~~~~~~~~~~~ 125 (259)
++|+||+| | .+ ...++ .+..+++++++||||++|++|+|+||+ ++++++ +++.+.........+
T Consensus 218 ~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~ 297 (409)
T 4eu1_A 218 IPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNN 297 (409)
T ss_dssp EEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999 2 11 01111 144577999999999999999999997 555467 677777666666778
Q ss_pred CCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 126 VSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
++.+.|.++..+++... ......++.+.+++++++++.+.+.|++++. +. .+....+++++|+|++++
T Consensus 298 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~------~~----~~~~~~~~~~~~~~~~~~- 366 (409)
T 4eu1_A 298 PPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGS------VH----DWSHIERQVGMMAYTGLT- 366 (409)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------CS----CCHHHHHSCSSEEECCCC-
T ss_pred CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC----CcceecCCceEEEEeCCC-
Confidence 88999999999887310 0001345778889999999999999987641 00 023346789999997764
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
.+.+..+++++||.+.|| .||+++. +++++++++++|+++++
T Consensus 367 --~~~~~~ll~~~gv~v~p~---------~Ri~~~~~~~~~i~~~~~~l~~~l~ 409 (409)
T 4eu1_A 367 --REQVELLRSEYHIYMTLN---------GRAAVSGLNSTNVEYVSQAIHNVTK 409 (409)
T ss_dssp --HHHHHHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHcCCEEEcCC---------CEEEEEecCHhhHHHHHHHHHHHhC
Confidence 567888888899999984 3999986 88889999999998763
No 64
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.97 E-value=1.6e-30 Score=226.04 Aligned_cols=240 Identities=15% Similarity=0.144 Sum_probs=186.3
Q ss_pred CCCcccchhhhhhccCccccc-----ccChhhhcccCC----C--CceEE-EEcCCCCCChhhH--------HHhhcCCC
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-----EGEANLWGNASS----D--THLVE-FVTAPNNPDGQMN--------KAVLKGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-----~~d~~~l~~~~~----~--~~~~i-~i~~p~NPtG~~~--------~~la~~~~ 60 (259)
+|+|+.+...++..|.++..+ .+|+++|++.++ + ++++| ++++||||||.++ .++|+++|
T Consensus 129 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~ 208 (407)
T 2zc0_A 129 NPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYD 208 (407)
T ss_dssp ESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 488999998888888765332 367888988876 5 77876 5789999999976 27899999
Q ss_pred cEEEeeccc--c--CC-CCCCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHH
Q 024997 61 AKSIYDHAY--F--WP-HFAPIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLR 133 (259)
Q Consensus 61 ~~vi~De~y--~--~~-~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 133 (259)
+++|+||+| + .. ...++. +..+++++++|+||.++ +|+|+||++++ +++++.+.......+.+++++.|.+
T Consensus 209 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
T 2zc0_A 209 LLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYI 286 (407)
T ss_dssp CEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHH
T ss_pred CEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 999999999 2 11 112221 23357899999999999 99999999999 7999999887776677789999999
Q ss_pred HHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHHHHHhc-CCCccccccccccccceeeCCCCCeeEEEecCC-Cch-HH
Q 024997 134 AFKLLKVVLEDGGN-NIFEFGYNTMKKRWENLSKIISLS-NRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-EED-KD 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 209 (259)
+..+++.. ..+ .++++.++.++++++.+.+.|++. ++ +....+.+++++|++++. .+. ++
T Consensus 287 ~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l 350 (407)
T 2zc0_A 287 ALEYLKRG---YFEKYHLEGALLGYKEKRDIMLKALENHLPN-------------AEFTKPIAGMFVMFFLPEGADGISF 350 (407)
T ss_dssp HHHHHHTT---HHHHHTTTTHHHHHHHHHHHHHHHHHHHCTT-------------SCBCCCSBSSEEEEECSTTCCHHHH
T ss_pred HHHHHHcC---CchHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CEEecCCCcEEEEEEcCCCCCHHHH
Confidence 99998731 013 466778888999999999999863 32 333456788999999964 233 45
Q ss_pred HHHHHHHcCeeeecCCcccC---CCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA---EARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~---~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
...+++++||.++||..|.. +.+++|||++. +++++++++++|++++++
T Consensus 351 ~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 351 ANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp HHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 55555544999999998874 36899999987 799999999999988753
No 65
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=2.5e-30 Score=221.20 Aligned_cols=231 Identities=18% Similarity=0.208 Sum_probs=179.0
Q ss_pred CCCcccchhhhhhccCccccc------ccChhhhcccCCCCceEEEEcCCCCCChhhH--------HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYFESVDYKF------EGEANLWGNASSDTHLVEFVTAPNNPDGQMN--------KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~------~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~~vi~D 66 (259)
+|+|+.|...++..|.++..+ .+++++|++.+++ ++++++++||||||.++ .++|+++|+++|+|
T Consensus 105 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 183 (361)
T 3ftb_A 105 VPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIID 183 (361)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEE
Confidence 489999999999888876332 4555789988877 99999999999999987 27788999999999
Q ss_pred ccc--cCC----CCCCCCCCCCCeEEEeccccccCCCcceEEEEE-ecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 67 HAY--FWP----HFAPIPAPADEELMIFTISKLTGHAGSRFGWAV-IKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 67 e~y--~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
|+| |.. .........+++++++|+||.+|++|+|+||++ .+ +++++.+...... ++++++.|.++.++++
T Consensus 184 e~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 260 (361)
T 3ftb_A 184 EAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-KEIAAKIKAKQNP--WNINCFAEMAAINCLK 260 (361)
T ss_dssp CSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-HHHHHHHHTTSCT--TCSCHHHHHHHHHTSS
T ss_pred CcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-HHHHHHHHhhCCC--CCCCHHHHHHHHHHhc
Confidence 999 321 111222456789999999999999999999999 66 7999998876653 5788999999988887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccce-eeCCCCCeeEEEecCCCchHHHHHHHHHcC
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFK-KIRPPSPAYAWVKCEREEDKDCYGILKAAK 218 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 218 (259)
..+++++.+++++++++.+.+.|+++++ +. ..+ ..|.++|++++..+.+.+.+.|.++|
T Consensus 261 ------~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------------~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~g 320 (361)
T 3ftb_A 261 ------DTNYIEESLLWIKKERKRFIEELNKIGF-------------IKRVFS-PHANFVLCRLENISGEKLYDSLLKED 320 (361)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHSSS-------------EEEEEC-CSSSEEEEEESSSCHHHHHHHHHTTT
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------CceecC-CCCeEEEEEcCCCCHHHHHHHHHHCC
Confidence 3467888999999999999999998754 33 334 44667888887644445555555679
Q ss_pred eeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 219 IIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 219 i~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
|.++||..|+. +++++|||++ ++++++++++.|+++.
T Consensus 321 i~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 321 IVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVE 358 (361)
T ss_dssp EECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred eEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 99999999975 4789999996 5555555555555554
No 66
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.97 E-value=1.9e-30 Score=226.18 Aligned_cols=231 Identities=16% Similarity=0.161 Sum_probs=172.8
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCC----Cce-EEEEcCC-CCCChhhHH--------Hhhc--
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSD----THL-VEFVTAP-NNPDGQMNK--------AVLK-- 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~----~~~-~i~i~~p-~NPtG~~~~--------~la~-- 57 (259)
+|+|+.|...++..|.++. .|.+|+++|++.+++ +++ ++++++| |||||.+++ ++|+
T Consensus 132 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~ 211 (413)
T 3t18_A 132 DYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEK 211 (413)
T ss_dssp SSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5899999999999888752 257788999988853 566 8889999 999999983 5666
Q ss_pred ----CCCcEEEeeccc--cC---CCCCCC----CCCCCC--eEEEeccccccCCCcceEEEEEe---cCHHHHHHHHHhh
Q 024997 58 ----GPYAKSIYDHAY--FW---PHFAPI----PAPADE--ELMIFTISKLTGHAGSRFGWAVI---KDEAVYQRMSAYI 119 (259)
Q Consensus 58 ----~~~~~vi~De~y--~~---~~~~~~----~~~~~~--~i~~~S~SK~~g~~G~R~G~i~~---~~~~~~~~~~~~~ 119 (259)
++|+++|+||+| |. ....++ .+..++ +++++||||.+|++|+|+||+++ + +++++.+....
T Consensus 212 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~-~~~~~~~~~~~ 290 (413)
T 3t18_A 212 AEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSS-KEIIEEFEASL 290 (413)
T ss_dssp TTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESC-HHHHHHHHHHH
T ss_pred hhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCC-HHHHHHHHHHH
Confidence 999999999999 31 112222 123444 48899999999999999999998 7 79999988765
Q ss_pred hhh----cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCC
Q 024997 120 SLN----TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSP 195 (259)
Q Consensus 120 ~~~----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (259)
... ..+++.+.|.++..+++........++..+.++.++++++.+.+.|+.++ +.+..++++
T Consensus 291 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g--------------~~~~~~~~~ 356 (413)
T 3t18_A 291 AHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENK--------------LTMIPYFGG 356 (413)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCCBCCCSS
T ss_pred HHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCccCCCce
Confidence 432 24588899998888876410000123455678889999999999998763 445678999
Q ss_pred eeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 196 AYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 196 ~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
+|+|+++. +.+.+.+.|.++||.++|| ++++|||++. +.+++ +++|.++++
T Consensus 357 ~~~~~~~~--~~~~~~~~l~~~gv~v~~g------~~~iRis~~~~~~~~~---l~~l~~~l~ 408 (413)
T 3t18_A 357 FFTFIPTD--KAFDIVKDLEKENIFTIPS------AKGIRVAICGVGEEKI---PKLVQRLAF 408 (413)
T ss_dssp SCEEEECS--CHHHHHHHHHHTTEECEEC------SSEEEECTTTSCGGGH---HHHHHHHHH
T ss_pred EEEEeCCC--CHHHHHHHHHhCCEEEecC------CCceEEEEeeCCHHHH---HHHHHHHHH
Confidence 99999874 3444445667899999996 4789999986 66666 777776664
No 67
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.97 E-value=2.5e-30 Score=224.59 Aligned_cols=235 Identities=12% Similarity=0.048 Sum_probs=177.1
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccC---CCCceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNAS---SDTHLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~---~~~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .+.+|++.+++.+ +++++++++++||||||.++ .++|+++|+
T Consensus 130 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 209 (401)
T 7aat_A 130 KPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNL 209 (401)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 4899999999999988652 4677777444443 56789999999999999887 278999999
Q ss_pred EEEeeccc--c--CCC---CCCC---CCCCCCeEEEeccccccCCCcceEEEEEe--cCHH----HHHHHHHhhhhhcCC
Q 024997 62 KSIYDHAY--F--WPH---FAPI---PAPADEELMIFTISKLTGHAGSRFGWAVI--KDEA----VYQRMSAYISLNTMG 125 (259)
Q Consensus 62 ~vi~De~y--~--~~~---~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~----~~~~~~~~~~~~~~~ 125 (259)
++|+||+| | .+. ..++ ....+++++++|+||.||++|+|+||+++ .+++ +.+.+.........+
T Consensus 210 ~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (401)
T 7aat_A 210 LAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSN 289 (401)
T ss_dssp EEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCC
Confidence 99999999 2 111 1111 13567899999999999999999999987 2255 556666666666778
Q ss_pred CCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 126 VSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
++...|.++..+++... .....+++.+.+++++++++.+.+.|++++. ++ .+....+++++|+|++++
T Consensus 290 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~------~~----~~~~~~~~~~~~~~~~~~- 358 (401)
T 7aat_A 290 PPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGS------SH----NWQHITDQIGMFCFTGLK- 358 (401)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------CS----CCHHHHHCCSSEEECCCC-
T ss_pred CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC----CCceecCCcceEEecCCC-
Confidence 88888888887776210 0000356778889999999999999987531 00 033457889999998774
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
.+.+..+++++||.+.|+ +|||++. +.+++++++++|+++++
T Consensus 359 --~~~~~~ll~~~gi~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~~~ 401 (401)
T 7aat_A 359 --PEQVERLTKEFSIYMTKD---------GRISVAGVASSNVGYLAHAIHQVTK 401 (401)
T ss_dssp --HHHHHHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHhCCEeccCC---------CeEEeccCChhhHHHHHHHHHHHhC
Confidence 667788888899999763 6999986 77779999999998763
No 68
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.95 E-value=5.1e-33 Score=240.99 Aligned_cols=240 Identities=14% Similarity=0.189 Sum_probs=189.1
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccCC-CCceEEEEcCCCCCChhhHH--------HhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~ 62 (259)
+|+|+.|...++..|.++. .|.+|++.|++.++ ++++++++++||||||.+++ ++|+++|++
T Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~ 199 (392)
T 3b1d_A 120 SPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVI 199 (392)
Confidence 4889999988888777652 24478888998886 67888899999999999973 788999999
Q ss_pred EEeeccc--c--CC-CCCCCC--C--CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc-CCCCHHHHH
Q 024997 63 SIYDHAY--F--WP-HFAPIP--A--PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT-MGVSRECQL 132 (259)
Q Consensus 63 vi~De~y--~--~~-~~~~~~--~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~q~ 132 (259)
+|+||+| | .. ...++. . ..+++++++|+||.+|++|+|+||++++++++++.+.......+ .+++++.|.
T Consensus 200 li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (392)
T 3b1d_A 200 LVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYI 279 (392)
Confidence 9999999 3 11 122222 1 15679999999999999999999999974459998887766543 356888999
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEecCCC--c-hH
Q 024997 133 RAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--E-DK 208 (259)
Q Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~ 208 (259)
++.++++. .++++.+.++.++++++.+.+.|++ +++ +....+.+++++|++++.. + .+
T Consensus 280 a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~ 341 (392)
T 3b1d_A 280 ATETAYRY-----GKPWLVALKAVLEENIQFAVEYFAQEAPR-------------LKVMKPQGTYLIWLDFSDYGLTDDA 341 (392)
Confidence 88888873 3567888889999999999998876 443 4456788999999988752 3 34
Q ss_pred HHHHHHHHcCeeeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.++||..|+. +++++||+++.+++++++++++|++++++
T Consensus 342 l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~~ 392 (392)
T 3b1d_A 342 LFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLPK 392 (392)
Confidence 455555678999999999974 46899999988889999999999988753
No 69
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=6.7e-30 Score=219.19 Aligned_cols=232 Identities=19% Similarity=0.260 Sum_probs=176.5
Q ss_pred CCCcccchhhhhhccCcccccccC-------hhhhcccCCCCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGE-------ANLWGNASSDTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d-------~~~l~~~~~~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~ 65 (259)
+|+|+.|...++..|.++..+..+ ++++.+.++++++++++++||||||.+++ ++|+++|+++|+
T Consensus 105 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 105 TPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEE
Confidence 489999999999888776433332 24344455677888899999999999872 789999999999
Q ss_pred eccc--cCC---CCCCCCCCCCCeEEEeccccccCCCcceEEEEE-ecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHH
Q 024997 66 DHAY--FWP---HFAPIPAPADEELMIFTISKLTGHAGSRFGWAV-IKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLK 139 (259)
Q Consensus 66 De~y--~~~---~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 139 (259)
||+| |.. ......+..+++++++|+||.+|++|+|+||++ ++ +++++.+..... .++++++.|.++.++++
T Consensus 185 De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~ 261 (364)
T 1lc5_A 185 DEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD-DAAMARMRRQQM--PWSVNALAALAGEVALQ 261 (364)
T ss_dssp ECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC-HHHHHHHHHHSC--TTCSCHHHHHHHHHGGG
T ss_pred ECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHHh
Confidence 9999 321 112222345679999999999999999999999 88 799998887654 46789999999988887
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 140 VVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
. ..++++.++.++++++.+.+.|+++++ +... +..|.|+|++++....++...++ ++||
T Consensus 262 ~------~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~-~~~g~~~~~~~~~~~~~l~~~l~-~~gi 320 (364)
T 1lc5_A 262 D------SAWQQATWHWLREEGARFYQALCQLPL-------------LTVY-PGRANYLLLRCEREDIDLQRRLL-TQRI 320 (364)
T ss_dssp C------HHHHHHHHHHHHHHHHHHHHHHHTSTT-------------EEEC-CCSSSEEEEEESCTTCCHHHHHH-TTTE
T ss_pred C------cHHHHHHHHHHHHHHHHHHHHHhcCCC-------------CEEC-CCCCeEEEEECCCcHHHHHHHHH-HCCc
Confidence 2 357888899999999999999987643 3333 34567788888653234555554 6799
Q ss_pred eeecCCcccC-CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 220 IGREGKKFRA-EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 220 ~~~~g~~f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
.++||..|+. +++++|||++ ++++++++++.|+++++
T Consensus 321 ~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 321 LIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVLT 358 (364)
T ss_dssp ECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC-
T ss_pred EEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 9999998864 4689999996 46777888888877764
No 70
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.97 E-value=7.2e-31 Score=229.52 Aligned_cols=235 Identities=13% Similarity=0.058 Sum_probs=179.6
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC---CCceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .+.+|++.|++.++ ++++++++++||||||.++ .++|+++|+
T Consensus 150 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 229 (420)
T 4f4e_A 150 DPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRL 229 (420)
T ss_dssp ESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCc
Confidence 4899999999999988752 45678899998886 6789999999999999987 278999999
Q ss_pred EEEeeccc--c--CC--CCCCC---CCCCCCeEEEeccccccCCCcceEEEEEe--cCHHHHHHH----HHhhhhhcCCC
Q 024997 62 KSIYDHAY--F--WP--HFAPI---PAPADEELMIFTISKLTGHAGSRFGWAVI--KDEAVYQRM----SAYISLNTMGV 126 (259)
Q Consensus 62 ~vi~De~y--~--~~--~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~~~~~----~~~~~~~~~~~ 126 (259)
++|+||+| | .. ...++ .+..+++++++|+||.+|++|+|+||+++ +++++++.+ +...+....++
T Consensus 230 ~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 4f4e_A 230 VPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNP 309 (420)
T ss_dssp EEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSC
T ss_pred EEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCC
Confidence 99999999 2 11 11111 13567899999999999999999999864 335665543 33333455667
Q ss_pred CHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 127 SRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+.+.|.++..++.... .+..++++++.+++++++++.+.+.|+++.. +. .+....+++|+|+|++++
T Consensus 310 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~---~~~~~~~~~g~~~~~~~~-- 377 (420)
T 4f4e_A 310 PTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGI-------ER---DFSFINAQRGMFSYSGLT-- 377 (420)
T ss_dssp CSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------SS---CCTHHHHSCSSEEECCCC--
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CC---CceeECCCccEEEEeCCC--
Confidence 8899999888887310 0001456788899999999999999997631 00 034456789999998873
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
.+.+..+++++||.++|+ .|+|++. +++++++++++|+++++
T Consensus 378 -~~~~~~~l~~~gI~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~l~ 420 (420)
T 4f4e_A 378 -SAQVDRLREEFGIYAVST---------GRICVAALNTRNLDVVANAIAAVLK 420 (420)
T ss_dssp -HHHHHHHHHHHCEECCTT---------SEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHhCCEEecCC---------CeEEEecCCHHHHHHHHHHHHHHhC
Confidence 567888888999999984 2999987 88889999999998863
No 71
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.97 E-value=1e-30 Score=230.54 Aligned_cols=242 Identities=13% Similarity=0.077 Sum_probs=183.4
Q ss_pred CCCcccchhhhh----hccCccc---------ccccChhhhcccCC---CCceEEEEcCCCCCChhhH--------HHhh
Q 024997 1 MPFYPLYQEQTD----YFESVDY---------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMN--------KAVL 56 (259)
Q Consensus 1 ~P~y~~~~~~~~----~~g~~~~---------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~--------~~la 56 (259)
+|+|+.|...++ ..|.++. ++.+|+++|++.++ ++++++++++||||||.++ .++|
T Consensus 152 ~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~ 231 (448)
T 3meb_A 152 STTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIM 231 (448)
T ss_dssp SSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 599999999999 8887652 35678899998884 4688889999999999987 2789
Q ss_pred cCCCcEEEeeccc--cCCC-----CCCCC---CCCCCeEEEeccccccCCCcceEEEE--Ee--------cCH----HHH
Q 024997 57 KGPYAKSIYDHAY--FWPH-----FAPIP---APADEELMIFTISKLTGHAGSRFGWA--VI--------KDE----AVY 112 (259)
Q Consensus 57 ~~~~~~vi~De~y--~~~~-----~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i--~~--------~~~----~~~ 112 (259)
+++|+++|+||+| |... ...+. ...+++++++||||.||++|+|+||+ ++ +++ +++
T Consensus 232 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~ 311 (448)
T 3meb_A 232 KEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMV 311 (448)
T ss_dssp HHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHH
T ss_pred HHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHH
Confidence 9999999999999 3111 11111 34567999999999999999999998 76 535 677
Q ss_pred HHHHHhhhhhcCCCCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC
Q 024997 113 QRMSAYISLNTMGVSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR 191 (259)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 191 (259)
+.+....+....+++.+.|.++..++.... .....+++++.+++++++++.+.+.|++++.-....... +....
T Consensus 312 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-----~~~~~ 386 (448)
T 3meb_A 312 SGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGT-----WDHIL 386 (448)
T ss_dssp HHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCC-----CTHHH
T ss_pred HHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccc-----cceeC
Confidence 777776666777889999999988887310 000113477888899999999999998762100000000 33456
Q ss_pred CCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 192 PPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+++++|+|++++ .+.+..+++++||.+.||+ .|||++. +.+++++++++|++++++
T Consensus 387 ~~~g~~~~~~~~---~~~~~~ll~~~gV~v~~G~--------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 387 TAIGMFTFTGLT---PEHVDYLKEKWSIYLVKAG--------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp HCCSSEEECCCC---HHHHHHHHHHHCEEECSGG--------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred CCceEEEecCCC---HHHHHHHHHhCCEEEeCCC--------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 789999998874 6788888888999999976 2999988 888999999999998763
No 72
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.97 E-value=6.6e-30 Score=222.65 Aligned_cols=235 Identities=11% Similarity=0.067 Sum_probs=175.1
Q ss_pred CCCcccchhhhhhccCcc---------cccccChhhhcccC---CCCceEEEEcCCCCCChhhHH--------HhhcCCC
Q 024997 1 MPFYPLYQEQTDYFESVD---------YKFEGEANLWGNAS---SDTHLVEFVTAPNNPDGQMNK--------AVLKGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~---------~~~~~d~~~l~~~~---~~~~~~i~i~~p~NPtG~~~~--------~la~~~~ 60 (259)
+|+|++|..+++..|.+. ..+.+|.+.+.+.+ .++++++++++||||||.+++ ++|++++
T Consensus 144 ~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~ 223 (420)
T 4h51_A 144 DPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKH 223 (420)
T ss_dssp ESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred cCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 599999999999999863 23467777766655 567889899999999999992 8899999
Q ss_pred cEEEeeccc--c--CCC-CCC-----CCCCCCCeEEEeccccccCCCcceEEEEEecCH------HHHHHHHHhhhhhcC
Q 024997 61 AKSIYDHAY--F--WPH-FAP-----IPAPADEELMIFTISKLTGHAGSRFGWAVIKDE------AVYQRMSAYISLNTM 124 (259)
Q Consensus 61 ~~vi~De~y--~--~~~-~~~-----~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~------~~~~~~~~~~~~~~~ 124 (259)
+++|+||+| | +.. ... ..+..++++++.||||.|+++|+|+||++++.+ .+...+....+....
T Consensus 224 ~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s 303 (420)
T 4h51_A 224 HQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYT 303 (420)
T ss_dssp CEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTS
T ss_pred ceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccC
Confidence 999999999 3 111 001 113557799999999999999999999998741 223334444556678
Q ss_pred CCCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC
Q 024997 125 GVSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE 203 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (259)
+++...|.++..++.... .......+...+++++++|+.+.+.|+.++.- .+ |..+.+++|+|.|+.++
T Consensus 304 ~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~---------~~-~~~i~~q~GmF~~~gls 373 (420)
T 4h51_A 304 CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTP---------GS-WEHVINQIGMFSFLGLS 373 (420)
T ss_dssp SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS---------SC-CTHHHHCCSSEEECCCC
T ss_pred cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------CC-CCeecCCCceEEecCcC
Confidence 889999999888887321 00123456777888899999999999875410 00 44557789999998773
Q ss_pred CCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 204 REEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 204 ~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+ ++|+++||.+.|+ + |||++. ++++++.+.++|.+++++
T Consensus 374 ---~e~v-~~L~e~~Vy~~~~-----g----Ris~Agl~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 374 ---KAQC-EYCQNHNIFITVS-----G----RANMAGLTHETALMLAQTINDAVRN 416 (420)
T ss_dssp ---HHHH-HHHHHTTEECCTT-----C----EEEGGGCCHHHHHHHHHHHHHHHC-
T ss_pred ---HHHH-HHHHhCCEEEcCC-----C----EEEeccCCHHHHHHHHHHHHHHHHH
Confidence 4444 5678899998873 1 999987 999999999999998763
No 73
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=1.1e-29 Score=218.29 Aligned_cols=228 Identities=17% Similarity=0.176 Sum_probs=180.0
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .|.+|+++|++.+++ +++++++++||||||.+++ ++++.+++++|+||+
T Consensus 123 ~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~ 202 (369)
T 3cq5_A 123 QPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEA 202 (369)
T ss_dssp ESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECT
T ss_pred CCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECC
Confidence 4899999998888887652 356788899988866 7889899999999999983 788888899999999
Q ss_pred c--cC--CCCCCCCCCCC-CeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHh
Q 024997 69 Y--FW--PHFAPIPAPAD-EELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 69 y--~~--~~~~~~~~~~~-~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
| |. .+.....+..+ ++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++.++++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~--- 276 (369)
T 3cq5_A 203 YAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN-PAFIDAVMLVRLP--YHLSALSQAAAIVALRH--- 276 (369)
T ss_dssp TGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC-THHHHHHHTTSCT--TCSCHHHHHHHHHHHHT---
T ss_pred chhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC-HHHHHHHHHcCCC--CCCCHHHHHHHHHHhcC---
Confidence 9 32 12222223345 7899999999999999999999999 5999988876553 56889999999999983
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeec
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~ 223 (259)
.+++++.+++++++++.+.+.|++.+ +... +..+.|+|++++ .+.+.+.+.|.++||.++|
T Consensus 277 ---~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~-~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~ 337 (369)
T 3cq5_A 277 ---SADTLGTVEKLSVERVRVAARLEELG--------------YAVV-PSESNFVFFGDF-SDQHAAWQAFLDRGVLIRD 337 (369)
T ss_dssp ---HHHHHTHHHHHHHHHHHHHHHHHHHT--------------CEEE-CCSSSEEEEECC-SSHHHHHHHHHHTTEECBC
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEC-CCCCeEEEEECC-CCHHHHHHHHHHCCEEEEE
Confidence 35678888999999999999998643 3334 345678898886 3344455555689999999
Q ss_pred CCcccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 224 GKKFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 224 g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
| + .++++|||++ +++++++++++|+++++.
T Consensus 338 ~---~-~~~~iRis~~-~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 338 V---G-IAGHLRTTIG-VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp C---S-CTTEEEEECC-CHHHHHHHHHHHHHHHTT
T ss_pred C---C-CCCeEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 7 2 2589999997 789999999999998764
No 74
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.97 E-value=1.3e-30 Score=225.83 Aligned_cols=234 Identities=12% Similarity=0.026 Sum_probs=177.5
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCC---CCceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .+.+|+++|++.++ ++++++++++||||||.++ .++|+++|+
T Consensus 128 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 207 (397)
T 3fsl_A 128 DPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKAREL 207 (397)
T ss_dssp SSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCE
Confidence 5899999999999887652 45678899999886 6788999999999999987 278999999
Q ss_pred EEEeeccc--cCCC----CCCC---CCCCCCeEEEeccccccCCCcceEEEEEe--cCHHHHHHHHHh----hhhhcCCC
Q 024997 62 KSIYDHAY--FWPH----FAPI---PAPADEELMIFTISKLTGHAGSRFGWAVI--KDEAVYQRMSAY----ISLNTMGV 126 (259)
Q Consensus 62 ~vi~De~y--~~~~----~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~~~~~~~~----~~~~~~~~ 126 (259)
++|+||+| |... ..++ .+..+++++++|+||.+|++|+|+||+++ .++++++.+... ......++
T Consensus 208 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 3fsl_A 208 IPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSP 287 (397)
T ss_dssp EEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSC
T ss_pred EEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999 3111 1111 13567899999999999999999999975 335666554332 23344566
Q ss_pred CHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 127 SRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+.+.|.++..++.... ......++++.+++++++++.+.+.|+++.. +.+ +....+++|+|+|++++
T Consensus 288 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~~---~~~~~~~~~~~~~~~~~-- 355 (397)
T 3fsl_A 288 PNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMP-------ERN---FDYLLNQRGMFSYTGLS-- 355 (397)
T ss_dssp CSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT-------TSC---CTHHHHCCSSEEECCCC--
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCC---ceeecCCceEEEecCCC--
Confidence 8899998888876310 0001456788899999999999999987641 000 33446788999998874
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l 256 (259)
.+.+..+++++||.++||. |||++. +++++++++++|++++
T Consensus 356 -~~~~~~~l~~~gi~v~~g~---------Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 356 -AAQVDRLREEFGVYLIASG---------RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp -HHHHHHHHHTTCEECCTTC---------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred -HHHHHHHHHhCCEEECCCC---------eEEEEecCHhhHHHHHHHHHhhC
Confidence 5667888889999999863 999987 8899999999998764
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=2.2e-29 Score=215.67 Aligned_cols=229 Identities=18% Similarity=0.211 Sum_probs=179.1
Q ss_pred CCCcccchhhhhhccCcccccccCh----hhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc--
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEGEA----NLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY-- 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~d~----~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y-- 69 (259)
+|+|+.|...++..|.++..+..+. +++++.+ +++++++++||||||.+++ ++|+++|+++|+||+|
T Consensus 113 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~--~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~ 190 (360)
T 3hdo_A 113 HPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPERY--EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAE 190 (360)
T ss_dssp SSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSSB--CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG
T ss_pred CCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhhc--CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh
Confidence 5899999999999888775443332 3333332 4568899999999999983 8899999999999999
Q ss_pred cCCC-CCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 70 FWPH-FAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 70 ~~~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
|... .....+..+++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++..+++ ..+
T Consensus 191 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~------~~~ 261 (360)
T 3hdo_A 191 FAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR-PEVIAALDKIRDH--YNLDRLAQAACVAALR------DQA 261 (360)
T ss_dssp GSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECC-HHHHHHHHHHSCS--CCSCHHHHHHHHHHHH------CHH
T ss_pred hCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeC-HHHHHHHHHhCCC--CCCCHHHHHHHHHHhc------CHH
Confidence 3221 1111134578999999999999999999999998 7999999887654 6789999999999998 345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCccc
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
++.+.+++++++++.+.+.|++++ +... +..+.|+|+.++..+.+.+.+.|.++||.++++...
T Consensus 262 ~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~- 325 (360)
T 3hdo_A 262 YLSECCRRIRETREWFTTELRSIG--------------YDVI-PSQGNYLFATPPDRDGKRVYDGLYARKVLVRHFSDP- 325 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--------------CEEC-CCSSSEEEEECTTCCHHHHHHHHHHTTEECBCCCST-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--------------CEEc-CCCccEEEEECCCCCHHHHHHHHHHCCEEEEECCCC-
Confidence 788899999999999999998763 3333 445678888887655666666777899999997762
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
..++++|||++ ++++++++++.|+++-+
T Consensus 326 ~~~~~iRis~~-~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 326 LLAHGMRISIG-TREEMEQTLAALKEIGE 353 (360)
T ss_dssp TTTTSEEEECC-CHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHHhc
Confidence 34589999996 78999999999988754
No 76
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.97 E-value=3.3e-29 Score=213.71 Aligned_cols=231 Identities=16% Similarity=0.249 Sum_probs=171.4
Q ss_pred CCCcccchhhhhhccCccccccc-Ch-hhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCC-cEEEeeccc--c
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEG-EA-NLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPY-AKSIYDHAY--F 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~-d~-~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~-~~vi~De~y--~ 70 (259)
+|+|+.|...++..|.++..+.. +. +.+. .++++++++++||||||.+++ ++++..+ .++|+||+| |
T Consensus 96 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~ 172 (350)
T 3fkd_A 96 IPSFAEYEDACRMYEHEVCFYPSNEDIGEAD---FSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSF 172 (350)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEETTSCGGGSC---CTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTS
T ss_pred CCCcHHHHHHHHHcCCeEEEEecCCccccCc---cCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhh
Confidence 48999999999999988766665 43 3332 267889999999999999983 5555443 599999999 3
Q ss_pred C--CCC-CCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCc
Q 024997 71 W--PHF-APIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGN 147 (259)
Q Consensus 71 ~--~~~-~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 147 (259)
. ... ....+..+++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++..+++. .+
T Consensus 173 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~-----~~ 244 (350)
T 3fkd_A 173 TTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN-KDFMKRVAAFSTP--WAVNALAIEAAKFILIH-----PA 244 (350)
T ss_dssp CSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC-HHHHHHHHTTCCT--TCSCHHHHHHHHHHHHC-----TT
T ss_pred ccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeC-HHHHHHHHHhCCC--CCCCHHHHHHHHHHHhC-----HH
Confidence 1 111 111145678999999999999999999999998 7999999887653 67899999999999984 33
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCch-HHHHHHHHHcCeeeecCCc
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREED-KDCYGILKAAKIIGREGKK 226 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~gi~~~~g~~ 226 (259)
.+.++.++.. ++++.+.+.|+++++ +.. .+..+.|+|+.++..+. ++...+++++||.++||..
T Consensus 245 ~~~~~~~~~~-~~~~~l~~~L~~~~~-------------~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~ 309 (350)
T 3fkd_A 245 QFTLPIRKWQ-RNTVDFITALNRLDG-------------VEV-HPSGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASN 309 (350)
T ss_dssp TTCCCHHHHH-HHHHHHHHHHHHSTT-------------EEE-CCCSSSEEEEEESSSCHHHHHHHHHHTTCEECEECTT
T ss_pred HHHHHHHHHH-HHHHHHHHHHhcCCC-------------cEE-CCCCCcEEEEECCCCCHHHHHHHHHHHCCEEEEeCcc
Confidence 3444444444 888899999987643 333 34556777888876444 4444444438999999999
Q ss_pred ccC-CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 227 FRA-EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 227 f~~-~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
|+. +++++|||++ ++++++++++.|++++++
T Consensus 310 f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 310 FRGLDESYVRITTQ-RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp STTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence 975 4789999996 667777888888877765
No 77
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.97 E-value=2e-30 Score=225.89 Aligned_cols=235 Identities=13% Similarity=0.091 Sum_probs=178.3
Q ss_pred CCCcccchhhhhhccCc-c--------cccccChhhhcccCC---CCceEEEEcCCCCCChhhH--------HHhhcCCC
Q 024997 1 MPFYPLYQEQTDYFESV-D--------YKFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMN--------KAVLKGPY 60 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~-~--------~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~--------~~la~~~~ 60 (259)
+|+|+.|...++..|.+ + ..+.+|+++|++.++ ++++++++++||||||.++ .++|+++|
T Consensus 137 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 216 (412)
T 1ajs_A 137 SPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRF 216 (412)
T ss_dssp ESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 48999999999988887 5 235678888988874 3678888999999999986 27889999
Q ss_pred cEEEeeccc--cCC-----CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEe---cCHH----HHHHHHHhhhhhc
Q 024997 61 AKSIYDHAY--FWP-----HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVI---KDEA----VYQRMSAYISLNT 123 (259)
Q Consensus 61 ~~vi~De~y--~~~-----~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~---~~~~----~~~~~~~~~~~~~ 123 (259)
+++|+||+| |.. ...++. ...+++++++|+||.+|.+|+|+||+++ + ++ +++.+........
T Consensus 217 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 295 (412)
T 1ajs_A 217 LFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE-PDSILRVLSQMQKIVRVTW 295 (412)
T ss_dssp CEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSS-HHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCC-HHHHHHHHHHHHHHHhccc
Confidence 999999998 321 111221 2457899999999999988999999999 6 67 4444554344444
Q ss_pred CCCCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEec
Q 024997 124 MGVSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKC 202 (259)
Q Consensus 124 ~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (259)
.+++++.|.++.++++... ....+.++++.+++++++++.+.+.|++++. +. .+....+.+|+|+|+++
T Consensus 296 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~---~~~~~~~~~~~~~~~~~ 365 (412)
T 1ajs_A 296 SNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKT-------PG---TWNHITDQIGMFSFTGL 365 (412)
T ss_dssp SSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------SS---CCHHHHHCCSSEEECCC
T ss_pred CCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-------CC---CeeEEcCCCceEEEeCC
Confidence 5568999999999988310 0001346788899999999999999987540 00 02334678899999877
Q ss_pred CCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhhh
Q 024997 203 EREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 203 ~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~~ 258 (259)
+ .+.+..+++++||.++|+ +|||++. +++++++++++|++++++
T Consensus 366 ~---~~~~~~~l~~~gv~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 366 N---PKQVEYLINQKHIYLLPS---------GRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp C---HHHHHHHHHTTCEECCTT---------SEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHhCCEEecCC---------cEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 4 567788888899999973 5999986 899999999999998864
No 78
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.96 E-value=8.2e-29 Score=210.17 Aligned_cols=217 Identities=21% Similarity=0.245 Sum_probs=167.0
Q ss_pred CCcccchhhhhhccCcccc------cccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeeccc-
Q 024997 2 PFYPLYQEQTDYFESVDYK------FEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHAY- 69 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~y- 69 (259)
|+|+.|...++..|.++.. |.+|+++| ++++++++++||||||.+++ ++++..| ++|+||+|
T Consensus 104 p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~ 177 (335)
T 1uu1_A 104 PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYY 177 (335)
T ss_dssp SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTH
T ss_pred CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcch
Confidence 7899999888888876633 34555544 57899899999999999983 6777778 99999999
Q ss_pred -c-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCc
Q 024997 70 -F-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGN 147 (259)
Q Consensus 70 -~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 147 (259)
| ........+..+++++++|+||.+|++|+|+||++++ +++++.+...... ++++++.|.++.++++. .
T Consensus 178 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~------~ 248 (335)
T 1uu1_A 178 EFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS-EKFIDAYNRVRLP--FNVSYVSQMFAKVALDH------R 248 (335)
T ss_dssp HHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHSCT--TCSCHHHHHHHHHHHHT------H
T ss_pred hhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC-HHHHHHHHHhcCC--CCcCHHHHHHHHHHhCC------H
Confidence 3 2222222234567999999999999999999999998 7999988876543 57899999999999983 3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcc
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f 227 (259)
+++++.+++++++++.+.+.|++++ +.. .+.+++|+|++++..+.+.+.+.|.++||.++|
T Consensus 249 ~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~---- 309 (335)
T 1uu1_A 249 EIFEERTKFIVEERERMKSALREMG--------------YRI-TDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRS---- 309 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--------------CCB-CCCCSSEEEEECCTHHHHHHHHHHHHHTEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC--------------cEE-cCCCCeEEEEECCCCCHHHHHHHHHHCCEEEEE----
Confidence 4778889999999999999998763 222 345678899998753333444445578999998
Q ss_pred cCCCCeEEEEeecChhhHHHHHHHHHHH
Q 024997 228 RAEARFVRLSLLKSQDDFDLLLHRLDEL 255 (259)
Q Consensus 228 ~~~~~~~Ris~~~~~~~~~~~~~~l~~~ 255 (259)
.++++|||++. ++++++++++|+++
T Consensus 310 --~~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 310 --FREGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp --ETTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred --CCCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 24799999964 57799999998865
No 79
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.96 E-value=7.5e-30 Score=222.36 Aligned_cols=234 Identities=13% Similarity=0.103 Sum_probs=176.8
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCC---CceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSD---THLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++ .+.++++++||||||.++ .++|+++|+
T Consensus 131 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~ 210 (412)
T 1yaa_A 131 KPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNH 210 (412)
T ss_dssp ESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 4899999999998887652 356788889888743 356666699999999986 278999999
Q ss_pred EEEeeccc--c--CC---CCCCCC---CCCC---CeEEEeccccccCCCcceEEEEE--e-----cCHH----HHHHHHH
Q 024997 62 KSIYDHAY--F--WP---HFAPIP---APAD---EELMIFTISKLTGHAGSRFGWAV--I-----KDEA----VYQRMSA 117 (259)
Q Consensus 62 ~vi~De~y--~--~~---~~~~~~---~~~~---~~i~~~S~SK~~g~~G~R~G~i~--~-----~~~~----~~~~~~~ 117 (259)
++|+||+| | .. ...++. ...+ ++++++|+||.+|.+|+|+||++ + + ++ +++.+..
T Consensus 211 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~-~~~~~~l~~~l~~ 289 (412)
T 1yaa_A 211 IALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN-KTIKPAVTSQLAK 289 (412)
T ss_dssp EEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH-HHHHHHHHHHHHH
T ss_pred EEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCC-HHHHHHHHHHHHH
Confidence 99999999 3 21 111221 2234 79999999999998899999998 7 5 56 7887777
Q ss_pred hhhhhcCCCCHHHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCe
Q 024997 118 YISLNTMGVSRECQLRAFKLLKVVL-EDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPA 196 (259)
Q Consensus 118 ~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (259)
.......+++.+.|.++.++++... ....+.++++.+++++++++.+.+.|++++. +. .+.+..+++|+
T Consensus 290 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~---~~~~~~~~~~~ 359 (412)
T 1yaa_A 290 IIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGT-------PG---NWDHIVNQCGM 359 (412)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------SS---CCTHHHHCCSS
T ss_pred HHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-------CC---CeeeeccCceE
Confidence 5555556678999999999987410 0001247888899999999999999987641 00 02234678899
Q ss_pred eEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 197 YAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 197 ~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
|+|++++ .+.+..+++++||.+++ ++|||++. +++++++++++|+++++
T Consensus 360 ~~~~~~~---~~~~~~~l~~~gi~v~~---------~~Ris~~~~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 360 FSFTGLT---PQMVKRLEETHAVYLVA---------SGRASIAGLNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp EEECCCC---HHHHHHHHHHHCEECCT---------TSEEEGGGCCTTTHHHHHHHHHHHHH
T ss_pred EEeeCCC---HHHHHHHHHhCCEEecc---------CcEEEEccCCHhHHHHHHHHHHHHHH
Confidence 9998763 45567888889999987 47999987 89999999999998875
No 80
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.96 E-value=6.6e-30 Score=221.32 Aligned_cols=234 Identities=13% Similarity=0.090 Sum_probs=174.1
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCC---CceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSD---THLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++ +++++++++||||||.++ .++|+++|+
T Consensus 127 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 206 (396)
T 2q7w_A 127 NPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGW 206 (396)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 4899999999998887652 356688899888853 478888999999999986 278899999
Q ss_pred EEEeeccc--cCC----CCCCCC---CCCCCeEEEeccccccCCCcceEEEEEe--cCHH----HHHHHHHhhhhhcCCC
Q 024997 62 KSIYDHAY--FWP----HFAPIP---APADEELMIFTISKLTGHAGSRFGWAVI--KDEA----VYQRMSAYISLNTMGV 126 (259)
Q Consensus 62 ~vi~De~y--~~~----~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~----~~~~~~~~~~~~~~~~ 126 (259)
++|+||+| |.. ...++. ...+++++++|+||.+|++|+|+||+++ ++++ +++.+.........++
T Consensus 207 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
T 2q7w_A 207 LPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNP 286 (396)
T ss_dssp EEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSC
T ss_pred EEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCC
Confidence 99999999 311 111221 2346899999999999999999999997 3353 5555554444444556
Q ss_pred CHHHHHHHHHHHHHH-HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 127 SRECQLRAFKLLKVV-LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+++.|.++.++++.. +.+..++++++.+++++++++.+.+.|++++. +. .+.+..+.+|+|+|++++
T Consensus 287 ~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~---~~~~~~~~~~~~~~~~~~-- 354 (396)
T 2q7w_A 287 PAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA-------NR---DFSFIIKQNGMFSFSGLT-- 354 (396)
T ss_dssp CHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTC-------CS---CCTHHHHCCSSEEECCCC--
T ss_pred CcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CC---CcceecCCCceEEEecCC--
Confidence 899999998888731 00001356778888999999999999987641 00 022346788999998774
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l 256 (259)
.+.+..+++++||.++|| +|||++. +++++++++++|++++
T Consensus 355 -~~~~~~~l~~~gv~v~~~---------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 355 -KEQVLRLREEFGVYAVAS---------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp -HHHHHHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred -HHHHHHHHHhcCeeecCC---------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 467778888899999873 6999986 9999999999998764
No 81
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.95 E-value=6.8e-29 Score=214.92 Aligned_cols=233 Identities=15% Similarity=0.051 Sum_probs=172.1
Q ss_pred CCCcccchhhhhhccCccc--------ccccChhhhcccCCC---CceEEEEcCCCCCChhhH--------HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY--------KFEGEANLWGNASSD---THLVEFVTAPNNPDGQMN--------KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~--------~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~--------~~la~~~~~ 61 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++ .++++++++||||||.++ .++|+++|+
T Consensus 124 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~ 203 (394)
T 2ay1_A 124 DPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGA 203 (394)
T ss_dssp ESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 4899999999988887652 356788889888743 467878899999999987 278999999
Q ss_pred EEEeeccc--cCCC----CCCCC---CCCCCeEEEeccccccCCCcceEEEEEe--cCHHHHHHHH----HhhhhhcCCC
Q 024997 62 KSIYDHAY--FWPH----FAPIP---APADEELMIFTISKLTGHAGSRFGWAVI--KDEAVYQRMS----AYISLNTMGV 126 (259)
Q Consensus 62 ~vi~De~y--~~~~----~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~~~~~~~~----~~~~~~~~~~ 126 (259)
++|+||+| |... ..++. ...+++++++|+||.+|++|+|+||+++ +++++++.+. ........++
T Consensus 204 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 283 (394)
T 2ay1_A 204 LPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFP 283 (394)
T ss_dssp EEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSC
T ss_pred EEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCC
Confidence 99999999 3111 11121 2346799999999999999999999998 3356655443 2333334456
Q ss_pred CHHHHHHHHHHHHHH-HhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC
Q 024997 127 SRECQLRAFKLLKVV-LEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (259)
+++.|.++.++++.. +.+..++++++.+++++++++.+.+.|++++. +. .+....+.+|+|+|++++
T Consensus 284 ~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~---~~~~~~~~~g~~~~~~~~-- 351 (394)
T 2ay1_A 284 PFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSG-------SD---RFGFVAEHRGMFSRLGAT-- 351 (394)
T ss_dssp CCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------SS---TTTHHHHCCSSEEECCCC--
T ss_pred ChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CC---CeeEEcCCceEEEeeCCC--
Confidence 889999998888731 00001346788889999999999999987541 00 022345678999998774
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHH
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDEL 255 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~ 255 (259)
.+.+..+++++||.++|| +|||++. +++++++++++|+++
T Consensus 352 -~~~~~~~l~~~gi~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 352 -PEQVKRIKEEFGIYMVGD---------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp -HHHHHHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred -HHHHHHHHHhCCEEecCC---------CeEEeecCCHhhHHHHHHHHHHc
Confidence 356778888899999874 5999986 899999999999876
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=3.4e-27 Score=204.56 Aligned_cols=233 Identities=12% Similarity=0.034 Sum_probs=175.9
Q ss_pred CCCcccchhhhhhccCcccccc-cChhhhcccCCC----CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-GEANLWGNASSD----THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.|...++..|.++..+. +|+++|++.+++ +++++++++|+||||.++ .++|+++|+++|+||+|.
T Consensus 134 ~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~ 213 (398)
T 3a2b_A 134 ERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHS 213 (398)
T ss_dssp TTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred CccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCc
Confidence 5899999999998888775443 578889888744 789999999999999987 389999999999999992
Q ss_pred ----CCCCCCCC---CCCCC-eEEEeccccccCCCcceEEEEEecCHHHHHHHHHh-hhhhcCCCCHHHHH-HHHHHHHH
Q 024997 71 ----WPHFAPIP---APADE-ELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY-ISLNTMGVSRECQL-RAFKLLKV 140 (259)
Q Consensus 71 ----~~~~~~~~---~~~~~-~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~-~~~~~~~~~~~~q~-~~~~~l~~ 140 (259)
+....++. +..++ +++++|+||.++.+| ||++++ +++++.+... ......+.+++.|. ++..+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~ 289 (398)
T 3a2b_A 214 LGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD-ADVIDFLKHNARSVMFSASMTPASVASTLKALEI 289 (398)
T ss_dssp TTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH
T ss_pred ccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC-HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHH
Confidence 11111221 22345 799999999999888 999999 7999988875 33344556666676 45577774
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCe
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKI 219 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi 219 (259)
. +++.+.+++++++++.+.+.|++++ +....+. |+++|+.++.. +...+.+.|.++||
T Consensus 290 ~------~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~~gi 348 (398)
T 3a2b_A 290 I------QNEPEHIEKLWKNTDYAKAQLLDHG--------------FDLGATE-SPILPIFIRSNEKTFWVTKMLQDDGV 348 (398)
T ss_dssp H------HHCTHHHHHHHHHHHHHHHHHHHTT--------------CCBCSCC-SSEEEEECCCHHHHHHHHHHHHHTTE
T ss_pred H------hhCHHHHHHHHHHHHHHHHHHHhcC--------------CCcCCCC-CCEEEEEcCCHHHHHHHHHHHHHCCc
Confidence 2 2456778899999999999998763 2233444 68889998742 23334444445699
Q ss_pred eeecCCcccC--CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 220 IGREGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 220 ~~~~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
.++||..|.. +.+++||+++. +++++++++++|++++++
T Consensus 349 ~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 349 FVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp ECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 9999998864 35899999986 999999999999998764
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.95 E-value=1.6e-26 Score=201.18 Aligned_cols=238 Identities=10% Similarity=0.040 Sum_probs=172.0
Q ss_pred CCCcccchh----hhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcC-CCcEEEeeccc
Q 024997 1 MPFYPLYQE----QTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKG-PYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~----~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~-~~~~vi~De~y 69 (259)
+|+|+.+.. .++..|.++..+.. |+++|++.++++++++++++||||||.++ .++|++ +|+++|+||+|
T Consensus 108 ~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~ 187 (404)
T 1e5e_A 108 ECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTF 187 (404)
T ss_dssp SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTT
T ss_pred CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCC
Confidence 588988888 66667877654443 78889999988999999999999999998 389999 99999999999
Q ss_pred cCCCC-CCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHH-HHHHhhhhh-cCCCCHHHHHHHHHHHHHHHhcC
Q 024997 70 FWPHF-APIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQ-RMSAYISLN-TMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 70 ~~~~~-~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~-~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
..... .++ ..++++++.|+||.++.+|+|+ ||++++ +++++ .+....... +.+++++.|.++.+.++.
T Consensus 188 ~~~~~~~~~--~~~~di~~~S~sK~~~~~g~ri~G~~~~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~----- 259 (404)
T 1e5e_A 188 CSPMITNPV--DFGVDVVVHSATKYINGHTDVVAGLICGK-ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----- 259 (404)
T ss_dssp TCTTTCCGG--GGTCSEEEEETTTTTTCSSCCCCEEEEEC-HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----
T ss_pred chhhhCCcc--ccCCEEEEEcCccccCCCCCCeEEEEEEC-HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----
Confidence 31111 112 2367999999999999999998 999999 68887 787766554 566888899888888762
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCc---cccccccccccceeeCC----CCCeeEEEecCCCchHHHHHHHHHcC
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFS---LQEIAPQYCTYFKKIRP----PSPAYAWVKCEREEDKDCYGILKAAK 218 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~g 218 (259)
...+.++..++.+.+.+.+++.+.+. ...+... ..+....+ .++++.| +++.. .+.+.+++++.|
T Consensus 260 ----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~--p~~~~~~~~~~~~g~~~~~-~~~~~-~~~~~~~l~~~~ 331 (404)
T 1e5e_A 260 ----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDH--EGHDIAKKQMRMYGSMITF-ILKSG-FEGAKKLLDNLK 331 (404)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSS--TTHHHHHHHCSSCCSEEEE-EETTH-HHHHHHHHHTCS
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCC--ccHHHHHhhCCCCceEEEE-EeCCC-HHHHHHHHHhCC
Confidence 34456667788888888888765321 1111110 11222222 3677777 77642 356777888899
Q ss_pred eeeecCCcccC--------------------------CCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 219 IIGREGKKFRA--------------------------EARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 219 i~~~~g~~f~~--------------------------~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
| +.+|..|+. +++++|||++. +++++++++|+++++
T Consensus 332 i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~al~ 393 (404)
T 1e5e_A 332 L-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLD 393 (404)
T ss_dssp S-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHH
T ss_pred C-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHH
Confidence 9 566665541 15899999987 777888888877664
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=2.2e-25 Score=191.90 Aligned_cols=236 Identities=12% Similarity=0.019 Sum_probs=174.2
Q ss_pred CCCccc--chhhhhhccCccc------ccccChhhhcccC--CCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEe
Q 024997 1 MPFYPL--YQEQTDYFESVDY------KFEGEANLWGNAS--SDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~--~~~~~~~~g~~~~------~~~~d~~~l~~~~--~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~ 65 (259)
+|+|+. |...++..|.++. .+.+|+++|++.+ .++++++++++|+||||.+. .++|+++|+++|+
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 181 (386)
T 2dr1_A 102 IIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFV 181 (386)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEE
T ss_pred cCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEE
Confidence 478887 7888887887652 2457889999988 56889999999999999987 3899999999999
Q ss_pred ecccc-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHH----------------Hh--hhhhcCCC
Q 024997 66 DHAYF-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMS----------------AY--ISLNTMGV 126 (259)
Q Consensus 66 De~y~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~----------------~~--~~~~~~~~ 126 (259)
||+|. ......+ ...+.+++++|+||.++.++ ++||++++ +++++.+. .. ......++
T Consensus 182 D~a~~~~~~~~~~-~~~~~di~~~s~sK~~~~~~-g~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (386)
T 2dr1_A 182 DAVSAMGGADIKF-DKWGLDVVFSSSQKAFGVPP-GLAIGAFS-ERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTP 258 (386)
T ss_dssp ECTTTBTTBCCCT-TTTTCSEEEEETTSTTCCCS-SCEEEEEC-HHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCC
T ss_pred EccccccCccccc-cccCCcEEEEeccccccCCC-ceEEEEEC-HHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCC
Confidence 99982 2111122 23356899999999998552 39999999 68888763 22 12334567
Q ss_pred CHHHHHHHHHHHHHHHhcCCcc-hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC---CCeeEEEec
Q 024997 127 SRECQLRAFKLLKVVLEDGGNN-IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP---SPAYAWVKC 202 (259)
Q Consensus 127 ~~~~q~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 202 (259)
+.+.|.++..+++.. .+. .+++.+++++++++.+.+.|+++ ++ ....++ .+.++|+.+
T Consensus 259 ~~~~~~a~~~~l~~~----~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~-------------~~~~~~~~~~~~~~~~~~ 320 (386)
T 2dr1_A 259 PMPQVFGINVALRII----EKMGGKEKWLEMYEKRAKMVREGVREI-GL-------------DILAEPGHESPTITAVLT 320 (386)
T ss_dssp CHHHHHHHHHHHHHH----HHTTCHHHHHHHHHHHHHHHHHHHHHT-TC-------------CBSSCTTCBCSSEEEEEC
T ss_pred CHHHHHHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-------------eeCcCccccCCceEEEEc
Confidence 888898888888753 111 36778889999999999999876 32 222332 467888888
Q ss_pred CC-CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 203 ER-EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 203 ~~-~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+. .+.+.+.+.|.++||.+++|..+. ..+++||+++. +++++++++++|++++++
T Consensus 321 ~~~~~~~~~~~~l~~~gi~v~~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 321 PPGIKGDEVYEAMRKRGFELAKGYGSV-KEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CTTCCHHHHHHHHHHTTEECEECCGGG-TTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCeEEecCcccc-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 63 344444445556699999998664 35799999984 999999999999988753
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.94 E-value=3.2e-26 Score=197.99 Aligned_cols=235 Identities=9% Similarity=-0.030 Sum_probs=172.7
Q ss_pred CCCccc--chhhhhhccCcccc------cccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPL--YQEQTDYFESVDYK------FEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~--~~~~~~~~g~~~~~------~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|+|+. |...++..|.++.. +.+|+++|++.+++ +++++++++|+||||.++ .++|+++|+++|+|
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 195 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVD 195 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEE
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEE
Confidence 478888 88888888876532 35788999998876 888999999999999987 38999999999999
Q ss_pred ccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-------------------hhhcC-C
Q 024997 67 HAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-------------------SLNTM-G 125 (259)
Q Consensus 67 e~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-------------------~~~~~-~ 125 (259)
|+| |+.....+ ...+.+++++|+||.++.+| |+||++++ +++++.+.... ..... +
T Consensus 196 ea~~~g~~~~~~-~~~~~di~~~s~sK~l~~~~-~~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 272 (393)
T 1vjo_A 196 TVTSLGGVPIFL-DAWGVDLAYSCSQKGLGCSP-GASPFTMS-SRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHT 272 (393)
T ss_dssp CTTTTTTSCCCT-TTTTCSEEECCSSSTTCSCS-SCEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSC
T ss_pred CCccccCcCCcc-cccCccEEEEcCcccccCCC-ceEEEEEC-HHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCC
Confidence 999 43211112 23456899999999998777 99999999 68888875420 01123 6
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC---CCeeEEEec
Q 024997 126 VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP---SPAYAWVKC 202 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 202 (259)
++.+.|.++..+++.. .+.++++.+++++++++.+.+.|+++ ++ ....++ .+.++++.+
T Consensus 273 ~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-------------~~~~~~~~~~~~~~~~~~ 334 (393)
T 1vjo_A 273 APINLYYALREALRLI----AQEGLANCWQRHQKNVEYLWERLEDI-GL-------------SLHVEKEYRLPTLTTVCI 334 (393)
T ss_dssp CCHHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT-TC-------------CBSSCGGGBCSSEEEEEC
T ss_pred CCHHHHHHHHHHHHHH----HHccHHHHHHHHHHHHHHHHHHHHHc-CC-------------cccCCccccCCcEEEEEc
Confidence 7888899888888752 12346778899999999999999876 32 222332 234667776
Q ss_pred CC-Cch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEe-e--cChhhHHHHHHHHHHHhh
Q 024997 203 ER-EED-KDCYGILKAAKIIGREGKKFRAEARFVRLSL-L--KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 203 ~~-~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~--~~~~~~~~~~~~l~~~l~ 257 (259)
+. .+. ++...+++++||.++||..|.. ++++|||+ + .+++++++++++|+++++
T Consensus 335 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 335 PDGVDGKAVARRLLNEHNIEVGGGLGELA-GKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp CTTCCHHHHHHHHHHHHCEECEECCGGGT-TTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHhhCCEEEecCccccC-CCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 53 233 4444555444999999997764 58999994 3 266679999999998863
No 86
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.94 E-value=6.6e-26 Score=196.18 Aligned_cols=235 Identities=10% Similarity=0.015 Sum_probs=175.0
Q ss_pred CCCcccchhhhhhccCcccccc-cChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-GEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++..+. .|++.|++.+++ +++++++++|+||||.++ .++|+++|+++|+||+
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~ 213 (399)
T 3tqx_A 134 ELNHASIIDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDS 213 (399)
T ss_dssp TTCCHHHHHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred CcccHHHHHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECC
Confidence 5889999999988888775443 677888888743 789999999999999997 3899999999999999
Q ss_pred c-c---CCCCCCCC---C-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHH
Q 024997 69 Y-F---WPHFAPIP---A-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLL 138 (259)
Q Consensus 69 y-~---~~~~~~~~---~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l 138 (259)
| . ........ + ..+.+++++|+||.++ |.+.||++++ +++++.+...... .+...+++.+.++...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (399)
T 3tqx_A 214 HAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH-KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVL 290 (399)
T ss_dssp TTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC-HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHH
T ss_pred ccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC-HHHHHHHHHhCcceeccCCCcHHHHHHHHHHH
Confidence 9 2 21111111 2 2456899999999998 3444999999 7999998875432 23456777777777777
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHc
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAA 217 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~ 217 (259)
+. .+.+.++.+++++++++.+.+.|++++ +... +..+.++|+.++.. +.+.+.+.|.++
T Consensus 291 ~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
T 3tqx_A 291 EL-----LKTEGPQLRKQLQENSRYFRAGMEKLG--------------FQLV-PGNHPIIPVMLGDAQLATNMADHLLQE 350 (399)
T ss_dssp HH-----HHHTHHHHHHHHHHHHHHHHHHHHHHT--------------CCBC-CCSSSEEEEEEECHHHHHHHHHHHHHT
T ss_pred HH-----HhhccHHHHHHHHHHHHHHHHHHHHcC--------------CCcC-CCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 74 214577889999999999999999764 3333 34456678877653 334444445568
Q ss_pred CeeeecCCccc--CCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGREGKKFR--AEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~g~~f~--~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
||.++|+..+. .+.+++|++++ .+++++++++++|++++++
T Consensus 351 gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 351 GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 99999875543 24579999997 3899999999999998864
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.94 E-value=3.8e-26 Score=196.51 Aligned_cols=235 Identities=14% Similarity=0.085 Sum_probs=166.4
Q ss_pred CCCcccchhhh---hhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCC--cEEE
Q 024997 1 MPFYPLYQEQT---DYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPY--AKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~---~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~--~~vi 64 (259)
+|+|+.+...+ +..|.++. .+.+|+++|++.++++++++++++|+||||.+++ ++|+++| +++|
T Consensus 96 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li 175 (384)
T 1eg5_A 96 PIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVH 175 (384)
T ss_dssp TTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEE
T ss_pred CCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEE
Confidence 47788776665 45566542 2457889999999888999999999999999983 8899999 9999
Q ss_pred eeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHH--HHHHHHh---hhhhcCCCCHHHHHHHHHHH
Q 024997 65 YDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAV--YQRMSAY---ISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 65 ~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~--~~~~~~~---~~~~~~~~~~~~q~~~~~~l 138 (259)
+||+| |+.....+. ..+.+++++|+||.+|.+| +||+++++ ++ .+.+... .......++.+.|.++..++
T Consensus 176 ~Dea~~~~~~~~~~~-~~~~di~~~s~sK~~g~~G--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 251 (384)
T 1eg5_A 176 VDAVQTIGKIPFSLE-KLEVDYASFSAHKFHGPKG--VGITYIRK-GVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAM 251 (384)
T ss_dssp EECTTTTTTSCCCCT-TTCCSEEEEEGGGGTSCTT--CEEEEECT-TSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHH
T ss_pred EEhhhhcCCcccCch-hcCCCEEEecHHHhcCCCc--eEEEEEcC-CCccccccccCcccccccCCCCChHHHHHHHHHH
Confidence 99998 432222222 2357899999999999889 79999994 65 2222111 11234567888998888888
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC---CCeeEEEecCCCchHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP---SPAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~ 215 (259)
+. ..+++++.+++++++++.+.+.|++. + +....+. .+.++++.++..+.+.+.+.|.
T Consensus 252 ~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~-g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (384)
T 1eg5_A 252 EI-----AVEELSEAAKHMEKLRSKLVSGLMNL-G-------------AHIITPLEISLPNTLSVSFPNIRGSTLQNLLS 312 (384)
T ss_dssp HH-----HHHTHHHHHHHHHHHHHHHHHHHHTT-T-------------CEECSCTTSBCTTEEEEECTTCCHHHHHHHHH
T ss_pred HH-----HHHhHHHHHHHHHHHHHHHHHHhCCC-C-------------eEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh
Confidence 74 23467788899999999999999863 2 2222221 2345666665444555566667
Q ss_pred HcCeeeecCCcccCC------------------CCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 216 AAKIIGREGKKFRAE------------------ARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~------------------~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
++||.+++|..|+.. .+++||+++ .+++++++++++|++++++
T Consensus 313 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 313 GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 899999999877531 378999998 4899999999999998763
No 88
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.94 E-value=1.5e-25 Score=194.28 Aligned_cols=233 Identities=10% Similarity=0.034 Sum_probs=175.3
Q ss_pred CCCcccchhhhhhccCcccccc-cChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-GEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++..+. .|+++|++.+++ +++++++++||||||.++ .++|+++|+++|+||+
T Consensus 136 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~ 215 (401)
T 1fc4_A 136 ALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDS 215 (401)
T ss_dssp TTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECT
T ss_pred chhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECc
Confidence 4788777777777787765443 577888887743 689999999999999987 3899999999999999
Q ss_pred c-cC---CCCCC----CCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhh--hhcCCCCHHHHHHHHHH
Q 024997 69 Y-FW---PHFAP----IPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYIS--LNTMGVSRECQLRAFKL 137 (259)
Q Consensus 69 y-~~---~~~~~----~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~ 137 (259)
| .+ +.... ..-..+.+++++|+||.+ |.+| ||++++ +++++.+..... ..+.+++++.|.++...
T Consensus 216 ~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~ 291 (401)
T 1fc4_A 216 HAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAAR-KEVVEWLRQRSRPYLFSNSLAPAIVAASIKV 291 (401)
T ss_dssp TTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEEC-HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHH
T ss_pred ccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcC-HHHHHHHHHhCcCceeCCCCCHHHHHHHHHH
Confidence 9 32 11111 111235689999999999 6666 999998 799998887542 23567889999999888
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHH
Q 024997 138 LKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKA 216 (259)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~ 216 (259)
++.. + ..++.+++++++++.+.+.|++++ +... +..+.++|++++.. +.+.+.+.|.+
T Consensus 292 l~~~-----~-~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~ 350 (401)
T 1fc4_A 292 LEMV-----E-AGSELRDRLWANARQFREQMSAAG--------------FTLA-GADHAIIPVMLGDAVVAQKFARELQK 350 (401)
T ss_dssp HHHH-----H-TCHHHHHHHHHHHHHHHHHHHHTT--------------CCBC-CSSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred HHHH-----h-cCHHHHHHHHHHHHHHHHHHHHcC--------------Cccc-CCCCCEEEEEcCChHHHHHHHHHHHH
Confidence 8742 1 135678889999999999998763 2223 45677889988642 33445555557
Q ss_pred cCeeeecCCcccCC--CCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 217 AKIIGREGKKFRAE--ARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 217 ~gi~~~~g~~f~~~--~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+||.+++|..|+.+ .+++||+++ .+++++++++++|++++++
T Consensus 351 ~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 351 EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 79999999877642 468999997 3899999999999998763
No 89
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=4.6e-25 Score=191.33 Aligned_cols=235 Identities=11% Similarity=-0.013 Sum_probs=170.8
Q ss_pred CCCcccchhhhhhccCccccccc-ChhhhcccCC----CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQTDYFESVDYKFEG-EANLWGNASS----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...++..|.++..+.. |++.|++.++ ++++++++++|+||||.++ .++|+++|+++|+||+|.
T Consensus 139 ~~~~~~~~~~~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~ 218 (401)
T 2bwn_A 139 SLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHA 218 (401)
T ss_dssp TTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred chhhHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccc
Confidence 47888888888888877644433 5677777764 5789999999999999987 389999999999999992
Q ss_pred ----CCCCCCCC---CC-CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHH
Q 024997 71 ----WPHFAPIP---AP-ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 71 ----~~~~~~~~---~~-~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 140 (259)
++....+. +. .+.+++++|+||.+|.+| ||++++ +++++.+...... ...+.+++.|.++..+++.
T Consensus 219 ~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~ 294 (401)
T 2bwn_A 219 VGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAF 294 (401)
T ss_dssp TTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHH
T ss_pred ccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHH
Confidence 22222111 22 234799999999999888 999998 7999888764322 2344566788777777774
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-ch-HHHHHHHHHcC
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-ED-KDCYGILKAAK 218 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ll~~~g 218 (259)
. ....+.+.+++++++++.+.+.|+++ + +....+.++ ++|+.++.. +. ++...+++++|
T Consensus 295 ~----~~~~~~~~~~~~~~~~~~l~~~L~~~-g-------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~g 355 (401)
T 2bwn_A 295 L----KTAEGQKLRDAQQMHAKVLKMRLKAL-G-------------MPIIDHGSH-IVPVVIGDPVHTKAVSDMLLSDYG 355 (401)
T ss_dssp H----TSHHHHHHHHHHHHHHHHHHHHHHHH-T-------------CCBCCCSSS-CEEEECCCHHHHHHHHHHHHHHHC
T ss_pred H----HhcccHHHHHHHHHHHHHHHHHHHHC-C-------------CcccCCCCC-eEEEEeCChHHHHHHHHHHHhcCC
Confidence 2 11124677888999999999999876 2 222344444 788888642 23 44445556789
Q ss_pred eeeecCCcccCC--CCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 219 IIGREGKKFRAE--ARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 219 i~~~~g~~f~~~--~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|.++|+..|+.+ .+++|+|++. +++++++++++|++++++
T Consensus 356 i~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 356 VYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp EECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred EEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 999999877643 3699999974 899999999999988753
No 90
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.93 E-value=4.3e-25 Score=192.15 Aligned_cols=235 Identities=16% Similarity=0.129 Sum_probs=169.9
Q ss_pred CCCccc----chhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEe
Q 024997 1 MPFYPL----YQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~----~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~ 65 (259)
+|+|+. |...++..|.++. .+.+|+++|++.+++++++|++++|+||||.++ .++|+++|+++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 125 VMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp TTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEE
T ss_pred cchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEE
Confidence 477887 5566666676542 345888999999988899999999999999987 3899999999999
Q ss_pred eccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--------------------hcC
Q 024997 66 DHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--------------------NTM 124 (259)
Q Consensus 66 De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--------------------~~~ 124 (259)
|++|..... .+. ...+.+++++|+||.+|.+| +||++++ +++++.+...... ...
T Consensus 205 D~a~~~~~~-~~~~~~~~~di~~~s~sK~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (420)
T 1t3i_A 205 DACQSAPHY-PLDVQLIDCDWLVASGHKMCAPTG--IGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEA 280 (420)
T ss_dssp ECTTTTTTS-CCCHHHHTCSEEEEEGGGTTSCTT--CEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCC
T ss_pred EhhhccCCc-cCchhhcCCCEEEEehhhhcCCCc--eEEEEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccC
Confidence 999931111 111 12246899999999998888 9999999 6998887654321 123
Q ss_pred CCCHHHHHHHHH-HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC------CCee
Q 024997 125 GVSRECQLRAFK-LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP------SPAY 197 (259)
Q Consensus 125 ~~~~~~q~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 197 (259)
+.+++.|.++.. +++.. .+..+++.+++++++++.+.+.|+++++ +....+. ++++
T Consensus 281 ~~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~ 343 (420)
T 1t3i_A 281 GTPAIAEAIALGAAVDYL----TDLGMENIHNYEVELTHYLWQGLGQIPQ-------------LRLYGPNPKHGDRAALA 343 (420)
T ss_dssp SSCCHHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHHTCTT-------------EEEESCCGGGSCBCSEE
T ss_pred CCccHHHHHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHhCCC-------------eEEeCCCccccccCCEE
Confidence 567777776554 44432 1123567788899999999999987643 3333443 4444
Q ss_pred EEEecCCCchHHHHHHHHHcCeeeecCCcccC------C-CCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 198 AWVKCEREEDKDCYGILKAAKIIGREGKKFRA------E-ARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 198 ~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~------~-~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
++.++..+.+.+.+.|.++||.+++|..|.. + ++++||+++. ++++++.++++|+++++
T Consensus 344 -~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 411 (420)
T 1t3i_A 344 -SFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR 411 (420)
T ss_dssp -EEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred -EEEECCCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 4466644455566777889999999965531 2 5899999985 88999999999998865
No 91
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.93 E-value=6e-25 Score=190.31 Aligned_cols=235 Identities=17% Similarity=0.105 Sum_probs=168.7
Q ss_pred CCCccc----chhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEe
Q 024997 1 MPFYPL----YQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~----~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~ 65 (259)
+|+|+. |...++..|.++. .+.+|+++|++.+++++++|++++|+||||.++ .++|+++|+++|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 120 QMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLV 199 (406)
T ss_dssp TTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred cccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEE
Confidence 366554 3344555666542 345788999999988899999999999999987 3889999999999
Q ss_pred eccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh---------------------hhc
Q 024997 66 DHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS---------------------LNT 123 (259)
Q Consensus 66 De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~---------------------~~~ 123 (259)
||+|..... .+. ...+.+++++|+||.+|.+| +||++++ +++++.+..... ...
T Consensus 200 D~~~~~g~~-~~~~~~~~~d~~~~s~~K~~g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (406)
T 1kmj_A 200 DGAQAVMHH-PVDVQALDCDFYVFSGHKLYGPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFE 275 (406)
T ss_dssp ECTTTTTTS-CCCHHHHTCSEEEEEGGGTTSCTT--CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGC
T ss_pred EchhhcCCC-CCcccccCCCEEEEEchhccCCCC--cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhcc
Confidence 999931111 111 12256899999999999888 8999999 799888764331 122
Q ss_pred CCCCHHHHHHHH-HHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC--CCCeeEEE
Q 024997 124 MGVSRECQLRAF-KLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP--PSPAYAWV 200 (259)
Q Consensus 124 ~~~~~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 200 (259)
.+.+++.|.++. .+++.. .+..+++.+++++++++.+.+.|+++++ +....+ .++++.|
T Consensus 276 ~~~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~- 337 (406)
T 1kmj_A 276 AGTPNTGGIIGLGAALEYV----SALGLNNIAEYEQNLMHYALSQLESVPD-------------LTLYGPQNRLGVIAF- 337 (406)
T ss_dssp CSSCCHHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHTTSTT-------------EEEESCTTCCSEEEE-
T ss_pred CCCCCHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHHHhcCCC-------------eEEecCCCcCCEEEE-
Confidence 445677777655 455532 1124567788888999999999987643 344455 5666555
Q ss_pred ecCCCchHHHHHHHHHcCeeeecCCcccC-------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 201 KCEREEDKDCYGILKAAKIIGREGKKFRA-------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 201 ~~~~~~~~~~~~ll~~~gi~~~~g~~f~~-------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.++..+.+.+.+.|.++||.+++|..|.. .++++||+++. ++++++.+++.|+++++
T Consensus 338 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 338 NLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp EETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 56544455556777788999999986531 25899999976 88999999999998875
No 92
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.92 E-value=5.5e-25 Score=189.73 Aligned_cols=232 Identities=12% Similarity=-0.003 Sum_probs=170.5
Q ss_pred CCCcccchhhhhhccCccccc-ccChhhhcccCCC---CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc-
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-EGEANLWGNASSD---THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF- 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~- 70 (259)
+|+|+.+...++..|.++..+ ..|+++|++.+++ +++++++++||||||.++ .++|+++|+++|+||+|-
T Consensus 130 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~ 209 (384)
T 1bs0_A 130 RLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGT 209 (384)
T ss_dssp TTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred ccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCccc
Confidence 478888888888888776444 2577888887743 378989999999999998 389999999999999992
Q ss_pred C--C-CCCCCCC--CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHh
Q 024997 71 W--P-HFAPIPA--PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 71 ~--~-~~~~~~~--~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
+ . ....+.. ..+.+++++|+||.+|.+| ||++++ +++++.+...... .+.+++++.|.++.+.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~-- 283 (384)
T 1bs0_A 210 GVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS-STVADYLLQFARHLIYSTSMPPAQAQALRASLAVI-- 283 (384)
T ss_dssp TTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--
T ss_pred ceecCCCCchHHhcCCCCcEEEeeccchhhccC---cEEEeC-HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHH--
Confidence 1 1 1111111 1234699999999999878 999998 7999988775322 23367888888888888742
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeee
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGR 222 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~ 222 (259)
.+.+.++.+++++++++.+.+.|++++ +... +..+.++|+.++.. +.+.+.+.|.++||.++
T Consensus 284 --~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~ 346 (384)
T 1bs0_A 284 --RSDEGDARREKLAALITRFRAGVQDLP--------------FTLA-DSCSAIQPLIVGDNSRALQLAEKLRQQGCWVT 346 (384)
T ss_dssp --HSHHHHHHHHHHHHHHHHHHHHHTTSS--------------CEEC-SCCSSBCCEEEESHHHHHHHHHHHHHTTEECC
T ss_pred --hccccHHHHHHHHHHHHHHHHHHHhcC--------------Cccc-CCCCCEEEEEeCCHHHHHHHHHHHHHCCcEEE
Confidence 111556778889999999999998753 2222 34566778887532 33444455556799999
Q ss_pred cCCcccC--CCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 223 EGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 223 ~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
+|..|+. +.+++||+++. +++++++++++|+++
T Consensus 347 ~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 347 AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 9987763 35799999975 899999999999875
No 93
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.92 E-value=4.3e-24 Score=188.65 Aligned_cols=243 Identities=13% Similarity=0.110 Sum_probs=167.3
Q ss_pred CCCcccchhh----hhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQ----TDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~----~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.|... ++..|.++..+.. |+++|++.++++++++++++||||||.++ .++|+++|+++|+||+|.
T Consensus 178 ~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~ 257 (464)
T 1ibj_A 178 DDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIM 257 (464)
T ss_dssp SSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTT
T ss_pred CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCc
Confidence 4788888754 3455666543332 78889999988999999999999999997 389999999999999995
Q ss_pred CCCC-CCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 WPHF-APIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~~~~-~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.+.. .++ ..+.+++++|+||.++ ..|+|+||++++++++++.+.........+.+++.|+++.+.++.
T Consensus 258 ~g~~~~~~--~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~-------- 327 (464)
T 1ibj_A 258 SPVLSRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT-------- 327 (464)
T ss_dssp CTTTCCGG--GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT--------
T ss_pred ccccCChh--hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhh--------
Confidence 3221 112 2467999999999886 459999999998558888888777655677889989888777762
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCc---cccccccccccceeeCCC---CCeeEEEecCCCc-hHHHHHHHHHcCeee
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFS---LQEIAPQYCTYFKKIRPP---SPAYAWVKCEREE-DKDCYGILKAAKIIG 221 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~ll~~~gi~~ 221 (259)
...+.+...++...+.+.+++.+.+. ...+... ..+....++ .|.+++++++..+ .+.+.+.|+..||.+
T Consensus 328 -~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~--p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~v 404 (464)
T 1ibj_A 328 -MALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDH--PGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAV 404 (464)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTS--TTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECS
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCC--cchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEee
Confidence 22234445555666667777654221 1222211 113333333 3557788885321 222334444579999
Q ss_pred ecCC------------ccc----------CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 222 REGK------------KFR----------AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 222 ~~g~------------~f~----------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
++|. ++. .+++++|+|++. +++++++++|++++++
T Consensus 405 ~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 405 SFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHHHS
T ss_pred cCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHhh
Confidence 9885 222 235799999987 8999999999998764
No 94
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.92 E-value=9.2e-25 Score=191.26 Aligned_cols=234 Identities=12% Similarity=0.039 Sum_probs=173.6
Q ss_pred CCCcccchhhhhhccCccccc-ccChhhhcccCCC----CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQTDYFESVDYKF-EGEANLWGNASSD----THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...++..|.++..+ ..|++.|++.+.+ ++++|++++|+||||.++ .++|+++|+++|+||+|-
T Consensus 155 ~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~ 234 (427)
T 2w8t_A 155 ADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHS 234 (427)
T ss_dssp TTCCHHHHHHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcccHHHHHHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCcc
Confidence 478888888888888776544 3688889888743 789999999999999987 389999999999999992
Q ss_pred ----CCCCCCC---CC-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh--hhcCCCCHHHHHHHHHHHHH
Q 024997 71 ----WPHFAPI---PA-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS--LNTMGVSRECQLRAFKLLKV 140 (259)
Q Consensus 71 ----~~~~~~~---~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~ 140 (259)
......+ .+ ..+.+++++||||.+|++| ||++++ +++++.+..... ..+...+++.+.++.++++.
T Consensus 235 ~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~-~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~ 310 (427)
T 2w8t_A 235 MGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSN-HPKFEAVRLACRPYIFTASLPPSVVATATTSIRK 310 (427)
T ss_dssp TTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEEC-CTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHH
T ss_pred ccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeC-HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHH
Confidence 2111111 12 2356999999999999888 999999 588888766522 22345667766666678874
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee-CCCCCeeEEEecCCC-chHHHHHHHHHcC
Q 024997 141 VLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI-RPPSPAYAWVKCERE-EDKDCYGILKAAK 218 (259)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ll~~~g 218 (259)
. ..+++.+++++++++.+.+.|++++ +... ++..+.++|+.++.. +...+.+.|.++|
T Consensus 311 ~------~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 370 (427)
T 2w8t_A 311 L------MTAHEKRERLWSNARALHGGLKAMG--------------FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGG 370 (427)
T ss_dssp H------TSCHHHHHHHHHHHHHHHHHHHHHT--------------CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred H------hcCHHHHHHHHHHHHHHHHHHHHcC--------------CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence 2 1256778899999999999998763 3333 332556788888653 2333444445679
Q ss_pred eeeecCCcccC--CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 219 IIGREGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 219 i~~~~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|.+.++..|+. +.+++|++++. +++++++++++|++++++
T Consensus 371 i~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 371 LYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp EECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999987764 34689999985 899999999999988753
No 95
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.92 E-value=4.7e-24 Score=183.39 Aligned_cols=233 Identities=7% Similarity=-0.004 Sum_probs=164.7
Q ss_pred CCccc--chhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPL--YQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~--~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|+|+. +...++..|.++. .+.+|+++|++.+++ +++++++++|+||||.++ .++|+++|+++|+|+
T Consensus 85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 164 (384)
T 3zrp_A 85 NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDG 164 (384)
T ss_dssp SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEEC
T ss_pred CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEEC
Confidence 55533 4455555676542 235788999998866 799999999999999987 389999999999999
Q ss_pred ccc-CCCCCCCCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHH-------------HHhhhh---------hc
Q 024997 68 AYF-WPHFAPIPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRM-------------SAYISL---------NT 123 (259)
Q Consensus 68 ~y~-~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~-------------~~~~~~---------~~ 123 (259)
+|- ......+ ...+.+++++|+||.++ .+| +||++++ +++++.+ ...... ..
T Consensus 165 a~~~~~~~~~~-~~~~~d~~~~s~~K~~~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (384)
T 3zrp_A 165 VSSVGAEEVKA-EEWNVDVYLTASQKALGSAAG--LGLLLLS-PKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAY 240 (384)
T ss_dssp TTTTTTSCCCT-TTTTCSEEEEETTSTTCCCSS--EEEEEEC-HHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCC
T ss_pred cccccCccccc-cccCCCEEEecCcccccCCCc--eEEEEEC-HHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCc
Confidence 982 2111112 23356899999999874 455 9999999 6888877 222211 11
Q ss_pred C-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC----CCeeE
Q 024997 124 M-GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP----SPAYA 198 (259)
Q Consensus 124 ~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 198 (259)
. .++...+.++..+++.. .+..+++.+++++++++.+.+.|+++ + +....+. ++.++
T Consensus 241 ~g~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~-g-------------~~~~~~~~~~~~~~~~ 302 (384)
T 3zrp_A 241 FATPPVHVILQLAEAFRLI----EKEGIENRIKRHTMVASAIRAGLEAL-G-------------LEIVARRPESYSNTVT 302 (384)
T ss_dssp SSCCCHHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT-T-------------CCBSCSSGGGBCSSEE
T ss_pred CCCCCHHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHHC-C-------------CeEccCcccccCccEE
Confidence 1 44555555555666532 11236778889999999999999886 3 2222333 56778
Q ss_pred EEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 199 WVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 199 ~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
|+.++..+.+.+.+.|.++||.+++|..+.. +++||++.. +++++++++++|++++++
T Consensus 303 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~--~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 303 GVILKVADPQKVLAGTVNEGVEFAPGVHPAF--KYFRIGHMGWVTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp EEECSSSCHHHHHHHHHTTTCCCEECCCTTC--CEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHCCEEEecCCCCCc--CEEEEeccccCCHHHHHHHHHHHHHHHHH
Confidence 8888765555566666677999999875443 899999864 889999999999998763
No 96
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.92 E-value=2.2e-24 Score=185.85 Aligned_cols=237 Identities=14% Similarity=0.061 Sum_probs=156.4
Q ss_pred CCCcccchh---hhhhccCcccccccChhhhcccCCCCceE-EEEcCCCCCCh-hhH-----HHhhcCCCcEEEeeccc-
Q 024997 1 MPFYPLYQE---QTDYFESVDYKFEGEANLWGNASSDTHLV-EFVTAPNNPDG-QMN-----KAVLKGPYAKSIYDHAY- 69 (259)
Q Consensus 1 ~P~y~~~~~---~~~~~g~~~~~~~~d~~~l~~~~~~~~~~-i~i~~p~NPtG-~~~-----~~la~~~~~~vi~De~y- 69 (259)
+|+|+.+.. .++..|.++..+ .|+++|++. ++++++ +++++|||||| ... .++|+++|+++|+||+|
T Consensus 105 ~~~y~~~~~~~~~~~~~g~~~~~v-~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~ 182 (374)
T 2aeu_A 105 LPELPGHPSIERSCKIVNAKYFES-DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASG 182 (374)
T ss_dssp CSSSSCCTHHHHHHHHTTCEEEEE-SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred cCCCCccHHHHHHHHHcCcEEEEe-CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcc
Confidence 477777655 455567776555 789999988 778999 99999999999 554 38899999999999998
Q ss_pred -cC--CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCC
Q 024997 70 -FW--PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGG 146 (259)
Q Consensus 70 -~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 146 (259)
+. +.........+.+++++|+||.+ +|+|+||++++ +++++.+.........+++++.|.++...++. .
T Consensus 183 ~~~~~~~~~~~~~~~~~di~~~S~sK~l--~g~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~-----~ 254 (374)
T 2aeu_A 183 ARVRLLFNQPPALKLGADLVVTSTDKLM--EGPRGGLLAGK-KELVDKIYIEGTKFGLEAQPPLLAGIYRALKN-----F 254 (374)
T ss_dssp HHHHHHTTCCCHHHHTCSEEEEETTSSS--SSCSCEEEEEE-HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHH-----C
T ss_pred cccccccccCCccccCCcEEEecCcccc--cCcceEEEEEC-HHHHHHHHHhhccccCCCCHHHHHHHHHHHHH-----H
Confidence 21 11110011123478999999996 47899999999 69999998877655567889999998888884 2
Q ss_pred cchHHHHHHHHHHHHHHH----HHHHHh-cCCCcccccccccccccee-eCCCCCeeEEEecCCC-c----hHHHHHHHH
Q 024997 147 NNIFEFGYNTMKKRWENL----SKIISL-SNRFSLQEIAPQYCTYFKK-IRPPSPAYAWVKCERE-E----DKDCYGILK 215 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~----~~~l~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----~~~~~~ll~ 215 (259)
.. +..+++.++++.+ .+.|.+ ++.+. ... .+.+ ..+.+.++.|.+.... + .+++..+++
T Consensus 255 ~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~ 324 (374)
T 2aeu_A 255 NL---ERIRKAFERAKNFDLSKIEKLNKELKAID----DNI---NIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLK 324 (374)
T ss_dssp CH---HHHHHHHHHHHHCCCHHHHHHHHHHTTTC----TTE---EEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred hH---HHHHHHHHHHHHHHHHHHHHHHHhhhhhh----hcc---CcceeeCCceEEEEeecccccccccchHHHHHHHHH
Confidence 11 1223333333333 333332 11100 000 0233 2455555666655421 1 125567888
Q ss_pred HcCeeeecCCcccCCCCeEEEEeec-Ch--hhHHHHHHHHHHHhh
Q 024997 216 AAKIIGREGKKFRAEARFVRLSLLK-SQ--DDFDLLLHRLDELIS 257 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~~~~~Ris~~~-~~--~~~~~~~~~l~~~l~ 257 (259)
++||.++||..|..+.+++||+++. +. .+++.+.+.+++.++
T Consensus 325 ~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~ 369 (374)
T 2aeu_A 325 NYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIK 369 (374)
T ss_dssp HHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred hCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHH
Confidence 8999999998886556799999975 32 236777777776665
No 97
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=1.5e-23 Score=178.35 Aligned_cols=230 Identities=11% Similarity=-0.025 Sum_probs=160.7
Q ss_pred CCcccch--hhhhhccCcccc------cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCC--CcEEEee
Q 024997 2 PFYPLYQ--EQTDYFESVDYK------FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGP--YAKSIYD 66 (259)
Q Consensus 2 P~y~~~~--~~~~~~g~~~~~------~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~--~~~vi~D 66 (259)
|+|+.+. ..++..|.++.. +.+|+++|++ ++++++++++|+||||.++ .++|+++ |+++|+|
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D 159 (352)
T 1iug_A 83 YGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGAD 159 (352)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEE
T ss_pred CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEE
Confidence 6677764 333445665522 3467777776 6788999999999999997 3889999 9999999
Q ss_pred ccc-cCCCCCCCCCCCCCeEEEecccc-ccCCCcceEEEEEecCHHHHHH---------HHH----h-hhhhcCCCCHHH
Q 024997 67 HAY-FWPHFAPIPAPADEELMIFTISK-LTGHAGSRFGWAVIKDEAVYQR---------MSA----Y-ISLNTMGVSREC 130 (259)
Q Consensus 67 e~y-~~~~~~~~~~~~~~~i~~~S~SK-~~g~~G~R~G~i~~~~~~~~~~---------~~~----~-~~~~~~~~~~~~ 130 (259)
++| ++.....+ ...+.+++++|+|| .+|.+| +||++++ +++++. +.. . .......++...
T Consensus 160 ~a~~~~~~~~~~-~~~~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (352)
T 1iug_A 160 MVTSLLVGEVAL-EAMGVDAAASGSQKGLMCPPG--LGFVALS-PRALERLKPRGYYLDLARELKAQKEGESAWTPAINL 235 (352)
T ss_dssp CTTTBTTBCCCS-GGGTCSEEEEESSSTTCCCSC--EEEEEEC-HHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHH
T ss_pred CCccccCcceec-cccCeeEEEecCcccccCCCc--eeEEEEC-HHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHH
Confidence 998 32111111 12246789999999 555455 8999998 577654 221 1 112234566777
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC-CCeeEEEecCC-CchH
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP-SPAYAWVKCER-EEDK 208 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~ 208 (259)
+.++..+++.. ..++++.+++++++++.+.+.|+++ + +....+. .+.++|+.++. .+.+
T Consensus 236 ~~a~~~al~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g-------------~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
T 1iug_A 236 VLAVAAVLEEV-----LPRLEEHLALKAWQNALLYGVGEEG-G-------------LRPVPKRFSPAVAAFYLPEGVPYA 296 (352)
T ss_dssp HHHHHHHHHHH-----GGGHHHHHHHHHHHHHHHHHHHHHT-T-------------CEESCSSBCTTCEEEECCTTCCHH
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHC-C-------------CcccccccCCeEEEEEcCCCCCHH
Confidence 77777777642 2337788899999999999999876 3 3333443 67788988873 3444
Q ss_pred HHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+.|.++||.+++|.... ..+++||+++. +++++++++++|++++++
T Consensus 297 ~~~~~l~~~gi~v~~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 297 RVKEAFAQRGAVIAGGQGPL-KGKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp HHHHHHHTTTEECEECCGGG-TTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEeCCCcc-CCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 55555667799999988432 45899999975 789999999999988753
No 98
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.91 E-value=4.5e-24 Score=183.95 Aligned_cols=231 Identities=13% Similarity=0.059 Sum_probs=162.3
Q ss_pred CCCcccchhh----hhhccCccc--------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhc----CC
Q 024997 1 MPFYPLYQEQ----TDYFESVDY--------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLK----GP 59 (259)
Q Consensus 1 ~P~y~~~~~~----~~~~g~~~~--------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~----~~ 59 (259)
+|+|+.+... ++..|.++. .+.+|++.|++.++++++++++++|+||||.++ .++|+ ++
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~ 187 (390)
T 1elu_A 108 DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNY 187 (390)
T ss_dssp TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSS
T ss_pred cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhc
Confidence 4788887653 344566542 345778899999988899999999999999987 38899 99
Q ss_pred CcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-------------------
Q 024997 60 YAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI------------------- 119 (259)
Q Consensus 60 ~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~------------------- 119 (259)
|+++|+||+| ++.....+ ...+.+++++|+||.++ .|.++||++++ +++++.+....
T Consensus 188 ~~~li~Dea~~~g~~~~~~-~~~~~d~~~~s~~K~~~-~~~g~G~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 264 (390)
T 1elu_A 188 PVRVLVDGAQSAGSLPLDF-SRLEVDYYAFTGHKWFA-GPAGVGGLYIH-GDCLGEINPTYVGWRSITYGAKGEPTGWAE 264 (390)
T ss_dssp CCEEEEECTTTBTTBCCCT-TTSCCSEEEEESSSTTC-CCTTCEEEEEC-TTTGGGCCCCSCCTTTEEECTTSCEEEECS
T ss_pred CcEEEEEcccccCCcCCCh-hhcCCCEEEcccccccc-CCCceEEEEEC-HHhHhhcCCccccCCcccccccCccccccc
Confidence 9999999999 32111112 23356899999999432 45669999999 58877665421
Q ss_pred ---hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee---CCC
Q 024997 120 ---SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI---RPP 193 (259)
Q Consensus 120 ---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~ 193 (259)
......++.+.|.++..+++... ..+++++.+++++++++.+.+.|+++++ +... .+.
T Consensus 265 ~~~~~~~~~~~~~~~~a~~~al~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~ 328 (390)
T 1elu_A 265 GGKRFEVATSAYPQYAGLLAALQLHQ---RQGTAEERYQAICQRSEFLWRGLNQLPH-------------VHCLATSAPQ 328 (390)
T ss_dssp GGGGGCCSCCCHHHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHSTT-------------EEESCSSCCS
T ss_pred chHhhCCCCCCHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHHHHHhcCC-------------cEEecCcccc
Confidence 11223456676776666665431 1235778899999999999999998643 2223 234
Q ss_pred CCeeEEEecC-CCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHH
Q 024997 194 SPAYAWVKCE-REEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDEL 255 (259)
Q Consensus 194 ~~~~~~~~~~-~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~ 255 (259)
++++.| +++ ..+.+.+.+.|.++||.+++|. +++++|||++ .+++++++++++|+++
T Consensus 329 ~~~~~~-~~~~~~~~~~~~~~l~~~gi~v~~~~----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 329 AGLVSF-TVDSPLGHRAIVQKLEEQRIYLRTIA----DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SSEEEE-EECSSSCHHHHHHHHHHTTEECEEET----TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred ccEEEE-EcCCCCCHHHHHHHHHHCCEEEEecC----CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 555544 774 3344445555568899999976 3589999985 4899999999998764
No 99
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.91 E-value=3.3e-23 Score=176.72 Aligned_cols=224 Identities=13% Similarity=0.036 Sum_probs=160.2
Q ss_pred hhhhccCcc------cccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCC-CcEEEeeccc-cCCCCCC
Q 024997 10 QTDYFESVD------YKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGP-YAKSIYDHAY-FWPHFAP 76 (259)
Q Consensus 10 ~~~~~g~~~------~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~-~~~vi~De~y-~~~~~~~ 76 (259)
.++..|.++ ..+.+|+++|+ ++++++++++++||||||.+++ ++|+++ |+++|+|++| +....
T Consensus 101 ~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~-- 176 (362)
T 3ffr_A 101 FAGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPK-- 176 (362)
T ss_dssp HHHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSC--
T ss_pred HHHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcc--
Confidence 444556554 23577888888 7788999999999999999983 789999 9999999998 21111
Q ss_pred CCCCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhh---------------------hhcCCCCHHHHHHH
Q 024997 77 IPAPADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYIS---------------------LNTMGVSRECQLRA 134 (259)
Q Consensus 77 ~~~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~q~~~ 134 (259)
. +..+.+++++|+||.++ .+| +|+++++ +++++.+..... .....++...+.++
T Consensus 177 ~-~~~~~d~~~~s~~K~~~~~~G--~g~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (362)
T 3ffr_A 177 F-DWTKIDSVFFSVQKCFGLPAG--LGVWILN-DRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLL 252 (362)
T ss_dssp C-CTTSCSEEEEETTSTTCCCSC--CEEEEEE-HHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHH
T ss_pred c-ChhHCcEEEEecccccCCCCc--eEEEEEC-HHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHH
Confidence 1 11225789999999998 788 5778888 688888876543 01345666767666
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGIL 214 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 214 (259)
..+++...+ ..+++.+++++++++.+.+.|++++++.+. .+ .....++..+|+.++. +.+.+.+.|
T Consensus 253 ~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~-------~~~~~~~~~~~~~~~~-~~~~~~~~l 318 (362)
T 3ffr_A 253 GKVTGDMLQ----ISADGIRKQTEEKAALINTYIESSKVFSFG--VE-------DAKLRSMTTIVANTTM-LPGEINKIL 318 (362)
T ss_dssp HHHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHCSSEEES--SS-------CGGGBCSSEEEEEESS-CHHHHHHHH
T ss_pred HHHHHHHHH----ccHHHHHHHHHHHHHHHHHHHHHccCceec--cC-------ChhhcCCceEEEecCC-CHHHHHHHH
Confidence 666663211 126778889999999999999987543221 00 0012346677888876 555566666
Q ss_pred HHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 215 KAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 215 ~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.++||.+++|..+. +++++|||++. ++++++.+++.|++++
T Consensus 319 ~~~gi~~~~g~~~~-~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 319 EPFDMAVGAGYGSK-KETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp GGGTEEEEECSGGG-TTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHCCeEEecCcccc-CCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 67799999986543 35899999975 8899999999998875
No 100
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.91 E-value=4.8e-24 Score=183.29 Aligned_cols=232 Identities=14% Similarity=0.084 Sum_probs=161.4
Q ss_pred CCCcccchhhhhh---ccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDY---FESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~---~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|+|+.+...+.. .|.++. .+.+|+++|++.++++++++++++|+||||.++ .++|+++|++ |+|
T Consensus 95 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D 173 (382)
T 4eb5_A 95 AVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HID 173 (382)
T ss_dssp TTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEE
T ss_pred CCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEE
Confidence 4778877766654 465542 234788999999988899999999999999987 3899999999 999
Q ss_pred ccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHH
Q 024997 67 HAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 67 e~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l 138 (259)
++| ++.....+ ...+.+++++|+||.+|.+| +||+++++ +. .+... .......++...+.++..++
T Consensus 174 ~a~~~g~~~~~~-~~~~~di~~~s~sK~~g~~g--~G~~~~~~-~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 247 (382)
T 4eb5_A 174 ATASVGQIEVDV-EKIGADMLTISSNDIYGPKG--VGALWIRK-EA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAA 247 (382)
T ss_dssp CTTTBTTBCCCH-HHHTCSEEEEETGGGTCCSS--CEEEEEET-TC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH
T ss_pred cchhcCCcccCc-cccCCCEEEeehHHhcCCCc--eEEEEEcc-cc--ccCceecCCCccccccCCCccHHHHHHHHHHH
Confidence 999 32111111 11246799999999988777 79999885 52 11111 11122344556666666666
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC---CCeeEEEecCCCchHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP---SPAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~ 215 (259)
+.. .+.+++.+++++++++.+.+.|+++++ +....+. .+.++++.++..+.+.+.+.|.
T Consensus 248 ~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (382)
T 4eb5_A 248 EIT-----AMEWREEAERLRRLRDRIIDNVLKIEE-------------SYLNGHPEKRLPNNVNVRFSYIEGESIVLSLD 309 (382)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHHHHHHHTTSTT-------------EEECSCSSSBCTTEEEEEETTSCHHHHHHHHH
T ss_pred HHH-----HHhHHHHHHHHHHHHHHHHHHHhhCCC-------------eEEeCCcccCCCCEEEEEeCCcCHHHHHHHHH
Confidence 632 224677788889999999999987643 2222332 2446677776444555555666
Q ss_pred HcCeeeecCCcccC------------------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 216 AAKIIGREGKKFRA------------------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 216 ~~gi~~~~g~~f~~------------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
++||.+++|..|.. +.+++||+++. +++++++++++|+++++
T Consensus 310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (382)
T 4eb5_A 310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp HHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 78999999986543 15799999984 89999999999998875
No 101
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=7.2e-24 Score=180.96 Aligned_cols=232 Identities=14% Similarity=0.057 Sum_probs=164.8
Q ss_pred CCccc-chhhhhhccCccc------ccccChhhhcccCCC--CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPL-YQEQTDYFESVDY------KFEGEANLWGNASSD--THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~-~~~~~~~~g~~~~------~~~~d~~~l~~~~~~--~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|+|+. |...++..|.++. .+.+|+++|++.+++ +++++++++|+||||.++ .++|+++|+++|+||
T Consensus 89 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 168 (366)
T 1m32_A 89 GAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDA 168 (366)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEEC
T ss_pred CCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEC
Confidence 34443 5555666676652 235788889988843 578889999999999987 389999999999999
Q ss_pred ccc-CCCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhh---------------h---hhcCCCC
Q 024997 68 AYF-WPHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYI---------------S---LNTMGVS 127 (259)
Q Consensus 68 ~y~-~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~---------------~---~~~~~~~ 127 (259)
+|. +.....+ ...+.+++++|+||.+ |..| +||++++ +++++.+.... . .....++
T Consensus 169 a~~~~~~~~~~-~~~~~di~~~s~~K~~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (366)
T 1m32_A 169 MSSFGGIPMDI-AALHIDYLISSANKCIQGVPG--FAFVIAR-EQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP 244 (366)
T ss_dssp TTTTTTSCCCT-TTTTCSEEEEESSSTTCCCSS--EEEEEEE-HHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred CccccCcCccc-cccCccEEEecCcccccCCCc--eEEEEEC-HHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCC
Confidence 993 2111122 2234689999999976 5445 7999999 68877654321 0 0024567
Q ss_pred HHHHHHHHHHHHHHHhcCCcch--HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC---CCCCeeEEEec
Q 024997 128 RECQLRAFKLLKVVLEDGGNNI--FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR---PPSPAYAWVKC 202 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 202 (259)
...+.++.++++.. ..+ +++.+++++++++.+.+.|+++ ++ .... +.+++++|+.+
T Consensus 245 ~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~-------------~~~~~~~~~~~~~~~~~~ 305 (366)
T 1m32_A 245 THTVLAFAQALKEL-----AKEGGVAARHQRYQQNQRSLVAGMRAL-GF-------------NTLLDDELHSPIITAFYS 305 (366)
T ss_dssp HHHHHHHHHHHHHH-----HHHTHHHHHHHHHHHHHHHHHHHHHHT-TC-------------CBSSCGGGBCSSEEEEEC
T ss_pred HHHHHHHHHHHHHH-----HHccCHhHHHHHHHHHHHHHHHHHHHC-CC-------------eeccCchhcCceEEEEEc
Confidence 77777777777642 122 5677889999999999999876 32 1122 24677889988
Q ss_pred CC---CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 203 ER---EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 203 ~~---~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+. .+.+.+.+.|.++||.+++|..|. ++++|++++. +++++++++++|++++++
T Consensus 306 ~~~~~~~~~~~~~~l~~~gi~v~~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 306 PEDPQYRFSEFYRRLKEQGFVIYPGKVSQ--SDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp CCCTTCCHHHHHHHHHHTTEECEECCCSS--SCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred CccCCCCHHHHHHHHHHCCEEEECCcCCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 73 344555555667799999998773 5899999975 789999999999998753
No 102
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.91 E-value=3.9e-23 Score=179.31 Aligned_cols=240 Identities=10% Similarity=0.072 Sum_probs=162.6
Q ss_pred CCCcccchhhh----hhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQT----DYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...+ +..|.++..+. .|+++|++.++++++++++++|+||||.++ .++|+++|+++|+||+|.
T Consensus 110 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~ 189 (398)
T 2rfv_A 110 SAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFM 189 (398)
T ss_dssp SSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 47888877766 55676654333 278889999988999999999999999998 389999999999999993
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHH-HHHHhhhhh-cCCCCHHHHHHHHHHHHHHHhcCCc
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQ-RMSAYISLN-TMGVSRECQLRAFKLLKVVLEDGGN 147 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~-~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~ 147 (259)
...... +...+.++++.|+||.++.+|+|+ ||++++ +++++ .+....... +.+.+++.|.++.+.++.
T Consensus 190 ~~~~~~-~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------- 260 (398)
T 2rfv_A 190 SPYCQQ-PLQLGADIVVHSVTKYINGHGDVIGGIIVGK-QEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT------- 260 (398)
T ss_dssp CTTTCC-GGGGTCSEEEEETTTTTTCSSCCCCEEEEEC-HHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-------
T ss_pred ccccCC-chhhCCcEEEEeCcccccCCCCceEEEEEEC-HHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-------
Confidence 111111 112357899999999998899999 999999 68877 666655554 567888889888888762
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccccccccccceeeCC---CCCeeEEEecCCCchHHHHHHHHHc---C
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSL---QEIAPQYCTYFKKIRP---PSPAYAWVKCEREEDKDCYGILKAA---K 218 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~---g 218 (259)
...+.+...++...+.+.|++.+.+.. ..+.. ...+....+ ..+.+++++++.. .+....++++. |
T Consensus 261 --~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~--~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~~~~~~~~ 335 (398)
T 2rfv_A 261 --LGIRMERHCENALKIARFLEGHPSITRVYYPGLSS--HPQYELGQRQMSLPGGIISFEIAGG-LEAGRRMINSVELCL 335 (398)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTT--STTHHHHHHHCSSCCSEEEEEETTH-HHHHHHHHTTCSSSE
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCC--CccHHHHHhhCCCCceEEEEEEcCC-HHHHHHHHHhCCcce
Confidence 233456677788888888887643211 11111 001222222 2344555577642 23445555544 8
Q ss_pred eeeecCCccc----------------------CCCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 219 IIGREGKKFR----------------------AEARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 219 i~~~~g~~f~----------------------~~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
+.+.+|..|. ..++.+|||++. ++++++.+.+.|++
T Consensus 336 i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 336 LAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp ECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 8888886541 126899999987 45556666666654
No 103
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.91 E-value=4.5e-24 Score=181.37 Aligned_cols=234 Identities=11% Similarity=-0.005 Sum_probs=162.8
Q ss_pred CCcccc--hhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPLY--QEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~~--~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|+|+.+ ...++..|.++. .+.+|+++|++.+++ +++++++++|+||||.++ .++|+++|+++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~ 161 (353)
T 2yrr_A 82 NGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDA 161 (353)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEEC
T ss_pred CCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEc
Confidence 556654 344455676652 235788889988866 789999999999999987 388999999999999
Q ss_pred cc-cCCCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHH-------------h--hhhhcCCCCHHH
Q 024997 68 AY-FWPHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSA-------------Y--ISLNTMGVSREC 130 (259)
Q Consensus 68 ~y-~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~-------------~--~~~~~~~~~~~~ 130 (259)
+| ++.....+ ...+.++++.|++|.+ |.+| +||++++ +++++.+.. . .......++...
T Consensus 162 a~~~~~~~~~~-~~~~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 2yrr_A 162 VTTLGMLPFSM-RAMGVDYAFTGSQKCLSAPPG--LAPIAAS-LEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLL 237 (353)
T ss_dssp TTTTTTSCCCH-HHHTCSEEECCTTSTTCCCSS--CEEEEEC-HHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHH
T ss_pred Ccccccccccc-cccCceEEEecCcccccCCCc--eEEEEEC-HHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHH
Confidence 99 32111111 1123478899999954 5577 6999999 688876641 0 111223456677
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC--CCeeEEEecC-CCch
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP--SPAYAWVKCE-REED 207 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~ 207 (259)
+.++..+++... +..+++.+++++++++.+.+.|+++ + ++...+. +++++|+.++ ..+.
T Consensus 238 ~~a~~~al~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g-------------~~~~~~~~~~~~~~~~~~~~~~~~ 299 (353)
T 2yrr_A 238 HYALLEALDLVL----EEGVAARERRAREVYAWVLEELKAR-G-------------FRPYPKASPLPTVLVVRPPEGVDA 299 (353)
T ss_dssp HHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHHT-T-------------CEESCSSSBCTTEEEEECCTTCCH
T ss_pred HHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHC-C-------------CccccCccCCCeEEEEECCCCCCH
Confidence 776666666421 1126677889999999999999875 3 2222332 5666788885 3344
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEee-c-ChhhHH-HHHHHHHHHhhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLL-K-SQDDFD-LLLHRLDELISK 258 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-~-~~~~~~-~~~~~l~~~l~~ 258 (259)
+.+.+.|.++||.+++|..|.. ++++|+|+. . ++++++ +++++|+++++.
T Consensus 300 ~~~~~~l~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 300 DRLVRALYAEGVAVAGGIGPTR-GQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp HHHHHHHHHTTEECEECCGGGT-TTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEeCCccccC-CCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 5555566677999999987654 478999994 3 888888 999999998764
No 104
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.91 E-value=1.7e-23 Score=180.68 Aligned_cols=234 Identities=11% Similarity=-0.030 Sum_probs=162.5
Q ss_pred CCcccch--hhhhhccCcccc------cccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPLYQ--EQTDYFESVDYK------FEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~~~--~~~~~~g~~~~~------~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|+|+.+. ..++..|..+.. +.+|+++|++.+++ ++++|++++|+||||.++ .++|+++|+++|+|+
T Consensus 102 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~ 181 (393)
T 2huf_A 102 TGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDT 181 (393)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEEC
T ss_pred CCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEc
Confidence 6666642 233445665422 35788889988876 889999999999999987 389999999999999
Q ss_pred cc-cCCCCCCCCCCCCCeEEEeccccc-cCCCcceEEEEEecCHHHHHHHHHhh---hh-------------------hc
Q 024997 68 AY-FWPHFAPIPAPADEELMIFTISKL-TGHAGSRFGWAVIKDEAVYQRMSAYI---SL-------------------NT 123 (259)
Q Consensus 68 ~y-~~~~~~~~~~~~~~~i~~~S~SK~-~g~~G~R~G~i~~~~~~~~~~~~~~~---~~-------------------~~ 123 (259)
++ ++.....+ ...+.++++.|+||. +|.+|+ ||++++ +++++.+.... .. ..
T Consensus 182 a~~~~~~~~~~-~~~~~d~~~~s~sK~l~g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (393)
T 2huf_A 182 VASLGGAPMFM-DRWEIDAMYTGSQKVLGAPPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIY 257 (393)
T ss_dssp TTTBTTBCCCT-TTTTCSEEECCSSSTTCCCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCC
T ss_pred ccccCCCCcch-hhcCccEEEECCCcccccCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCC
Confidence 98 32211122 233578999999996 567886 999999 79999887541 00 01
Q ss_pred -CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC---CCCeeEE
Q 024997 124 -MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP---PSPAYAW 199 (259)
Q Consensus 124 -~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 199 (259)
..++...+.++..+++... +..+.+.+++++++++.+.+.|+++ ++ ....+ .++.+++
T Consensus 258 ~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~-------------~~~~~~~~~~~~~~~ 319 (393)
T 2huf_A 258 HHTISSTLLYGLREAIAMAC----EEGLPALIARHEDCAKRLYRGLQDA-GF-------------ELYADPKDRLSTVTT 319 (393)
T ss_dssp SCCCCHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHHT-TC-------------CBSSCGGGBCTTEEE
T ss_pred CCCCCHHHHHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHHHHc-CC-------------eeccCccccCCcEEE
Confidence 2345555555555666421 1136677888999999999999876 32 22222 2455777
Q ss_pred EecC-CCch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEe-ec--ChhhHHHHHHHHHHHhhh
Q 024997 200 VKCE-REED-KDCYGILKAAKIIGREGKKFRAEARFVRLSL-LK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 200 ~~~~-~~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+.++ ..+. ++...+++++||.+++|..+.. .+++||++ +. +++++++++++|++++++
T Consensus 320 ~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~-~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 320 IKVPQGVDWLKAAQYAMKTYLVEISGGLGPTA-GQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECBCCCGGGT-TTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHhCCEEEecCccccc-CCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 8775 3333 4455555567999999887643 58999999 53 678899999999988753
No 105
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.91 E-value=1.4e-23 Score=182.03 Aligned_cols=230 Identities=15% Similarity=0.063 Sum_probs=163.8
Q ss_pred CCCcccchhhhhhccCcc----------cccc----cChhhhcccCCCCceEEEEcCCCCCChhhH----------HHhh
Q 024997 1 MPFYPLYQEQTDYFESVD----------YKFE----GEANLWGNASSDTHLVEFVTAPNNPDGQMN----------KAVL 56 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~----------~~~~----~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~----------~~la 56 (259)
+|+|+.+...+...+... .++. .|+++|++.+++++++++++ |+||||.++ .++|
T Consensus 135 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~ 213 (406)
T 4adb_A 135 KNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELC 213 (406)
T ss_dssp TTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHH
T ss_pred CCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHH
Confidence 578888866655554421 1122 57889999998889997777 999999854 2889
Q ss_pred cCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHH
Q 024997 57 KGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSREC 130 (259)
Q Consensus 57 ~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (259)
+++|+++|+||+| |......+. +....++ ||||.++ +|+|+||++++ +++++.+.......+++.+++.
T Consensus 214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 288 (406)
T 4adb_A 214 NRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL---TTAKALG-GGFPVGALLAT-EECARVMTVGTHGTTYGGNPLA 288 (406)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEEC-HHHHHTCCTTSSCCSSTTCHHH
T ss_pred HHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE---Eechhhc-CCCCeEEEEEc-HHHHhhhccCCcCCCCCCCHHH
Confidence 9999999999999 321111111 2223333 7899999 99999999999 7999888776666678899999
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---ch
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---ED 207 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 207 (259)
|.++.++++.. . . ++..++++++++.+.+.|+.+.. .+. .+.. .+..|.++|+.++.. +.
T Consensus 289 ~~a~~~~l~~~----~-~--~~~~~~~~~~~~~l~~~l~~~~~----~~~-----~~~~-~~~~g~~~~~~~~~~~~~~~ 351 (406)
T 4adb_A 289 SAVAGKVLELI----N-T--PEMLNGVKQRHDWFVERLNTINH----RYG-----LFSE-VRGLGLLIGCVLNADYAGQA 351 (406)
T ss_dssp HHHHHHHHHHH----S-S--HHHHHHHHHHHHHHHHHHHHHHH----HHC-----CEEE-EEEETTEEEEEECTTTTTCH
T ss_pred HHHHHHHHHHH----H-h--cCHHHHHHHHHHHHHHHHHHHHH----hCC-----CceE-EEEEEEEEEEEEeCCcHHHH
Confidence 99999988853 1 1 45678888888888888876531 000 0111 223467788887653 24
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+.|.++||.++|+. .+++|+++ ..+++++++++++|++++++
T Consensus 352 ~~~~~~l~~~gi~v~~~~-----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 352 KQISQEAAKAGVMVLIAG-----GNVVRFAPALNVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp HHHHHHHHHTTEECEESS-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEeecC-----CCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 445555556799999843 58999965 44899999999999998753
No 106
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=6.1e-24 Score=183.74 Aligned_cols=207 Identities=13% Similarity=0.094 Sum_probs=151.5
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccc
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTIS 91 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~S 91 (259)
|+++|++.++++++++++++|+||||.+++ ++|+++|+++|+||+| |........ ...+....+.|+|
T Consensus 171 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S 250 (392)
T 3ruy_A 171 DLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG 250 (392)
T ss_dssp CHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC
T ss_pred cHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEc
Confidence 788999999989999999999999999872 7899999999999999 322111111 1111111134789
Q ss_pred cccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 92 KLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 92 K~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
|.++ .| +|+||++++ +++++.+.......+++++++.|.++.++++.. + . ++.+++++++++.+.+.|++
T Consensus 251 K~l~-gG~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~-~-~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 251 KALG-GGVFPISCAAAN-RDILGVFEPGSHGSTFGGNPLACAVSIAALEVL-----E-E-EKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp GGGG-TTTSCCEEEEEC-HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH-----H-H-TTHHHHHHHHHHHHHHHHTT
T ss_pred hhhh-CChhhhEEEEEC-HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH-----H-h-hhHHHHHHHHHHHHHHHHHH
Confidence 9986 47 999999999 699888877666667889999999999998853 1 1 45678888999999999886
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLL 248 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~ 248 (259)
++. ..+....+.++ ++++.++. +.+.+.+.|.++||.++||. ++++|+++. .++++++++
T Consensus 322 ~~~-----------~~~~~~~~~g~-~~~~~~~~-~~~~l~~~l~~~gi~v~~~~-----~~~iRi~~~~~~~~~~i~~~ 383 (392)
T 3ruy_A 322 IDN-----------PMITEVRGKGL-FIGIELNE-PARPYCEQLKAAGLLCKETH-----ENVIRIAPPLVISEEDLEWA 383 (392)
T ss_dssp CCC-----------TTEEEEEEETT-EEEEEESS-CSHHHHHHHHTTTEECCCBT-----TTEEEECCCTTCCHHHHHHH
T ss_pred hcC-----------CCceEEEeeee-EEEEEEcc-hHHHHHHHHHHCCcEEecCC-----CCEEEEECCCCCCHHHHHHH
Confidence 531 11333344444 44555665 34445555557899999854 589999954 489999999
Q ss_pred HHHHHHHhh
Q 024997 249 LHRLDELIS 257 (259)
Q Consensus 249 ~~~l~~~l~ 257 (259)
+++|+++++
T Consensus 384 ~~~l~~~l~ 392 (392)
T 3ruy_A 384 FQKIKAVLS 392 (392)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998863
No 107
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.91 E-value=9e-24 Score=181.26 Aligned_cols=232 Identities=15% Similarity=0.103 Sum_probs=159.3
Q ss_pred CCCcccchhhhhhc---cCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYF---ESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~---g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|.|+.+...+... |.++. .+.+|+++|++.++++++++++++||||||.++ .++|+++|+ +|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D 173 (382)
T 4hvk_A 95 AVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHID 173 (382)
T ss_dssp TTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEE
T ss_pred CCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEE
Confidence 46788877766553 55542 345789999999998999999999999999987 389999999 9999
Q ss_pred ccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-------hhhcCCCCHHHHHHHHHHH
Q 024997 67 HAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-------SLNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 67 e~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l 138 (259)
++|..+ ..... ...+.+++++|+||.+|.+| +|++++++ +. .+.... ......++...+.++..++
T Consensus 174 ~a~~~~-~~~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 247 (382)
T 4hvk_A 174 ATASVG-QIEVDVEKIGADMLTISSNDIYGPKG--VGALWIRK-EA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAA 247 (382)
T ss_dssp CTTTBT-TBCCCHHHHTCSEEEEESGGGTSCTT--CEEEEEET-TC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH
T ss_pred hHHhcC-CCCCCchhcCCCEEEEeHHHhcCCCc--eEEEEEcC-cc--CcCcccccCCCcCccccCCcCHHHHHHHHHHH
Confidence 988211 11111 12245799999999988777 67777763 43 121111 1112334566666666666
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC---CeeEEEecCCCchHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS---PAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ll~ 215 (259)
+. ...++++.+++++++++.+.+.|+++++ +....+++ +.++++.++..+.+.+.+.|.
T Consensus 248 ~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (382)
T 4hvk_A 248 EI-----TAMEWREEAERLRRLRDRIIDNVLKIEE-------------SYLNGHPEKRLPNNVNVRFSYIEGESIVLSLD 309 (382)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHHHHHHHTTSTT-------------EEECSCSSSBCTTEEEEEETTCCHHHHHHHHH
T ss_pred HH-----HHhhHHHHHHHHHHHHHHHHHHHhcCCC-------------eEEeCCccccCCCEEEEEECCCCHHHHHHHHH
Confidence 53 2246777888999999999999987654 22223222 345666666555666667777
Q ss_pred HcCeeeecCCcccCC------------------CCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 216 AAKIIGREGKKFRAE------------------ARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~------------------~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
++||.+++|..|... .+++||+++. +++++++++++|+++++
T Consensus 310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~ 371 (382)
T 4hvk_A 310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 889999999877642 5899999974 78999999999998875
No 108
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=1.7e-23 Score=180.93 Aligned_cols=235 Identities=9% Similarity=-0.038 Sum_probs=165.1
Q ss_pred CCCcccch--hhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQ--EQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~--~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|+|+.|. ..++..|.++. .+.+|+++|++.+++ ++++|++++|+||||.++ .++|+++|+++|+|
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D 179 (396)
T 2ch1_A 100 VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVD 179 (396)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE
Confidence 47888884 35666777652 245888899988876 789999999999999998 38999999999999
Q ss_pred ccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-----------------------hhh
Q 024997 67 HAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-----------------------SLN 122 (259)
Q Consensus 67 e~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-----------------------~~~ 122 (259)
|+| ++.....+ ...+..+++.|++|.++ .+.++|+++++ +++++.+.... ...
T Consensus 180 ea~~~g~~~~~~-~~~~~d~~~~s~~K~~~-~~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (396)
T 2ch1_A 180 AVASLCGVPFYM-DKWEIDAVYTGAQKVLG-APPGITPISIS-PKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRY 256 (396)
T ss_dssp CTTTBTTBCCCT-TTTTCCEEECCCC-CCC-CCSSCEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCC
T ss_pred ccccccCCccch-hhcCcCEEEEcCCcccc-CCCCeEEEEEC-HHHHHhhhhccCcccceEechHHHHHhhhhhcccCCC
Confidence 999 33111112 22234677899999764 22346999998 68888775420 111
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC----CeeE
Q 024997 123 TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS----PAYA 198 (259)
Q Consensus 123 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 198 (259)
...++...|.++..+++.. .+..+++.+++++++++.+.+.|+++ ++ ....+.+ +.++
T Consensus 257 ~~~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-------------~~~~~~~~~~~~~~~ 318 (396)
T 2ch1_A 257 HHTVASNLIFALREALAQI----AEEGLENQIKRRIECAQILYEGLGKM-GL-------------DIFVKDPRHRLPTVT 318 (396)
T ss_dssp CCCCCHHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHHHH-TC-------------CBSSCSGGGBCTTEE
T ss_pred CCCCcHHHHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHC-CC-------------eeccCCccccCCceE
Confidence 2346777888877787742 12356778889999999999999876 32 2223322 3477
Q ss_pred EEecCC-Cch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEe-ec--ChhhHHHHHHHHHHHhh
Q 024997 199 WVKCER-EED-KDCYGILKAAKIIGREGKKFRAEARFVRLSL-LK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 199 ~~~~~~-~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~--~~~~~~~~~~~l~~~l~ 257 (259)
++.++. .+. ++...+++++||.+++|..+.. ++++||++ +. +++++++++++|+++++
T Consensus 319 ~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 319 GIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTF-GKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp EEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGT-TTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHhCCEEEecCccccC-CCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 887752 333 4455555556999999875543 58999999 42 78899999999998875
No 109
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.91 E-value=6.1e-24 Score=185.35 Aligned_cols=233 Identities=13% Similarity=0.066 Sum_probs=164.2
Q ss_pred CCCcccchhhhhhc---cCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYF---ESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~---g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|+|+.+...+... |.++. .+.+|+++|++.++++++++++++|+||||.++ .++|+++|+++|+|
T Consensus 120 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 199 (423)
T 3lvm_A 120 KTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVD 199 (423)
T ss_dssp TTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEE
T ss_pred CccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEE
Confidence 47888887777544 66542 345688999999988999999999999999998 38999999999999
Q ss_pred ccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh-------hhcCCCCHHHHHHHHHHH
Q 024997 67 HAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS-------LNTMGVSRECQLRAFKLL 138 (259)
Q Consensus 67 e~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~q~~~~~~l 138 (259)
|+|..... ... ...+.+++++|+||.+|.+| +||+++++ ++.+.+..... ......+...+.++..++
T Consensus 200 ea~~~~~~-~~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 275 (423)
T 3lvm_A 200 ATQSVGKL-PIDLSQLKVDLMSFSGHKIYGPKG--IGALYVRR-KPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAY 275 (423)
T ss_dssp CTTTTTTS-CCCTTTSCCSEEEEESTTTTSCSS--CEEEEECB-TTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHH
T ss_pred hhhhcCCC-CcChhhcCCCEEEechHHhcCCCC--eEEEEEec-cccCCCCccccCCcccccccCCCCCHHHHHHHHHHH
Confidence 99832111 111 23356899999999988777 89999984 66655544321 123345666666665666
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC---CeeEEEecCCCchHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS---PAYAWVKCEREEDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ll~ 215 (259)
+.. ...+++.+++++++++.+.+.|+++++ +....+.+ +.++++.++..+.+.+.+.|.
T Consensus 276 ~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 337 (423)
T 3lvm_A 276 RIA-----KEEMATEMERLRGLRNRLWNGIKDIEE-------------VYLNGDLEHGAPNILNVSFNYVEGESLIMALK 337 (423)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHHHHHHHTTSTT-------------EEEESCSTTBCTTEEEEEETTSCHHHHHHHTT
T ss_pred HHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCC-------------EEEeCCccccCCCeEEEEeCCCCHHHHHHHHh
Confidence 532 234677888999999999999987654 33333332 334555555555566666665
Q ss_pred HcCeeeecCCcccCC------------------CCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 216 AAKIIGREGKKFRAE------------------ARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 216 ~~gi~~~~g~~f~~~------------------~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+ |.+++|..|... .+++||+++. +++++++++++|+++++
T Consensus 338 ~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~ 397 (423)
T 3lvm_A 338 D--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIG 397 (423)
T ss_dssp T--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred h--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5 999999776531 4899999975 78999999999998875
No 110
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.91 E-value=1.8e-23 Score=179.59 Aligned_cols=221 Identities=11% Similarity=0.013 Sum_probs=159.8
Q ss_pred CCCcccchhhhhhccCcc----------cccc----cChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhc
Q 024997 1 MPFYPLYQEQTDYFESVD----------YKFE----GEANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLK 57 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~----------~~~~----~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~ 57 (259)
+|+|+.+...+...+... .++. .|+++|++.++++++++++++|+||||.++ .++|+
T Consensus 124 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~ 203 (375)
T 2eh6_A 124 ENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICK 203 (375)
T ss_dssp BTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHH
T ss_pred CCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHH
Confidence 478888877665543221 0122 588899999988899999999999999983 27899
Q ss_pred CCCcEEEeeccc--cCCCC--CCCC--CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHH
Q 024997 58 GPYAKSIYDHAY--FWPHF--APIP--APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQ 131 (259)
Q Consensus 58 ~~~~~vi~De~y--~~~~~--~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q 131 (259)
++|+++|+||+| |.... ..+. +.... ++ ||||.++ +|+|+||++++ +++++.+.......+++.+++.|
T Consensus 204 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d-~~--s~SK~~~-~g~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 278 (375)
T 2eh6_A 204 EKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPD-VI--ALAKGLG-GGVPIGAILAR-EEVAQSFTPGSHGSTFGGNPLAC 278 (375)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS-EE--EECGGGG-TTSCCEEEEEE-HHHHTTCCTTSCCCSSTTCHHHH
T ss_pred HhCCEEEEeccccCCCCCCcchhhhhcCCCCC-EE--EEccccc-CCCCeEEEEEc-HHHHhhhcCCCCCCCCCCCHHHH
Confidence 999999999999 32111 1111 11122 22 8899998 79999999999 68888776533334567889999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCY 211 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (259)
.++.++++.. .+..++++++++.+.+.|++++. .. .+..|.++|++++....++..
T Consensus 279 ~~~~~~l~~~---------~~~~~~~~~~~~~l~~~L~~~~~--------------~~-~~~~g~~~~~~~~~~~~~~~~ 334 (375)
T 2eh6_A 279 RAGTVVVDEV---------EKLLPHVREVGNYFKEKLKELGK--------------GK-VKGRGLMLGLELERECKDYVL 334 (375)
T ss_dssp HHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTTS--------------SE-EEEETTEEEEECSSCCHHHHH
T ss_pred HHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHhc--------------CC-ceEEEEEEEEEEcCcHHHHHH
Confidence 9888888742 15677888899999999987542 11 223567889988753344555
Q ss_pred HHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHh
Q 024997 212 GILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELI 256 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l 256 (259)
.+ .++||.++|+ +++++|++++ .+++++++++++|++++
T Consensus 335 ~l-~~~gi~~~~~-----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 335 KA-LEKGLLINCT-----AGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp HH-HHTTEECEEE-----TTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred HH-HHCCCEEecC-----CCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 54 4689999985 2589999976 38999999999998764
No 111
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.90 E-value=5.3e-23 Score=173.92 Aligned_cols=239 Identities=10% Similarity=0.046 Sum_probs=163.7
Q ss_pred CCCcccchhhhh----hccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcC-CCcEEEeeccc
Q 024997 1 MPFYPLYQEQTD----YFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKG-PYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~----~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~-~~~~vi~De~y 69 (259)
+|+|+.+...+. ..|.++..+. .|++.|++.++++++++++++||||||.++ .++|++ +|+++|+|++|
T Consensus 44 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~ 123 (331)
T 1pff_A 44 DCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTF 123 (331)
T ss_dssp SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTT
T ss_pred CCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCC
Confidence 478887766653 3566553332 578889999988899999999999999998 389999 99999999999
Q ss_pred cCCC-CCCCCCCCCCeEEEeccccccCCCcce-EEEEEecCH-HHHHHHHHhhhh-hcCCCCHHHHHHHHHHHHHHHhcC
Q 024997 70 FWPH-FAPIPAPADEELMIFTISKLTGHAGSR-FGWAVIKDE-AVYQRMSAYISL-NTMGVSRECQLRAFKLLKVVLEDG 145 (259)
Q Consensus 70 ~~~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R-~G~i~~~~~-~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 145 (259)
.... ..++ ..+.+++++|+||.++.+|.| +||++++ + ++++.+...... .+...+++.++++...++
T Consensus 124 ~~~~~~~~~--~~~~d~~~~s~~K~~~~~~~r~~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~------ 194 (331)
T 1pff_A 124 ASPILTNPL--DLGVDIVVHSATKYINGHTDVVAGLVCSR-ADIIAKVKSQGIKDITGAIISPHDAWLITRGTL------ 194 (331)
T ss_dssp THHHHCCGG--GGTCSEEEEETTTTTSSSSSCCCEEEEEC-HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH------
T ss_pred cccccCChh--hcCCcEEEEECccccCCCCCceEEEEEeC-cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc------
Confidence 2100 0111 245789999999999999999 7999998 6 899988877665 456778888877666665
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhcCCCccc---cccccccccceeeC---CCCCeeEEEecCCCchHHHHHHHHHcCe
Q 024997 146 GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQ---EIAPQYCTYFKKIR---PPSPAYAWVKCEREEDKDCYGILKAAKI 219 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gi 219 (259)
......+...++.+.+.+.+++...+... .+.+. ..+.... ...+.++.+.+. +.+.+..+++++||
T Consensus 195 ---~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI 267 (331)
T 1pff_A 195 ---TLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDH--PGHEIAKKQMKMFGSMIAFDVD--GLEKAKKVLDNCHV 267 (331)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTS--TTHHHHHHHCSSCCSEEEEECS--SHHHHHHHHHTCSS
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCC--ccHHHHHhhCCCCceEEEEEEC--CHHHHHHHHHhCCC
Confidence 23344566777777787887765432211 11110 0111111 123455666665 45667788888999
Q ss_pred eeecCC---------c----------------ccCCCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 220 IGREGK---------K----------------FRAEARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 220 ~~~~g~---------~----------------f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
.+++.+ + ++.+++.+|+|++. ++++++.+++.|+++
T Consensus 268 ~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 268 VSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp SEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred ceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 876652 1 12235899999976 556677777777654
No 112
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.90 E-value=1.2e-23 Score=181.39 Aligned_cols=229 Identities=12% Similarity=0.083 Sum_probs=165.2
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++ +++++++++|+||||.+. .++|+++|+++|+||+
T Consensus 130 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 209 (397)
T 3f9t_A 130 ITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAA 209 (397)
T ss_dssp TTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred CcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEcc
Confidence 5899999999998887652 345788999999877 889999999999999987 3899999999999999
Q ss_pred c--c----CCCCC-------CCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc-----------
Q 024997 69 Y--F----WPHFA-------PIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT----------- 123 (259)
Q Consensus 69 y--~----~~~~~-------~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~----------- 123 (259)
| + ..... .+. .. +.++++.|++|.++ +|.|+|++++.++.+.+.+........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 3f9t_A 210 FGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTR 287 (397)
T ss_dssp TGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSC
T ss_pred ccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCcccccccc
Confidence 9 1 11100 111 22 56889999999875 788999999876555554432221111
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC
Q 024997 124 MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE 203 (259)
Q Consensus 124 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (259)
.+.+...+.++...+.. ..+.+..++++++++.+.+.|+++ + +....+..+.++++.++
T Consensus 288 ~~~~~~~~~a~~~~~~~-------~~~~~~~~~~~~~~~~l~~~L~~~-g-------------~~~~~~~~~~~~~~~~~ 346 (397)
T 3f9t_A 288 VGFGGACTYAVLRYLGR-------EGQRKIVNECMENTLYLYKKLKEN-N-------------FKPVIEPILNIVAIEDE 346 (397)
T ss_dssp CSHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHT-T-------------CCBSSCCSSSEEEEECT
T ss_pred ccchHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHHHC-C-------------CEEEcCCCccEEEEEeC
Confidence 12245566666665542 356777888899999999999976 3 22234455667777776
Q ss_pred CCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 204 REEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 204 ~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
. .+.+.+.|.++||.+++|.. ++++||+++. +++++++++++|++++++
T Consensus 347 ~--~~~~~~~l~~~gi~v~~~~~----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~~ 397 (397)
T 3f9t_A 347 D--YKEVCKKLRDRGIYVSVCNC----VKALRIVVMPHIKREHIDNFIEILNSIKRD 397 (397)
T ss_dssp T--HHHHHHHHHHTTCBCEECSS----SSEEEEECCTTCCHHHHHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHhCCeEEeccCC----CCEEEEEEcCCCCHHHHHHHHHHHHHhhCC
Confidence 4 44455555677999999653 4899999974 899999999999998753
No 113
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.90 E-value=2.1e-22 Score=175.06 Aligned_cols=242 Identities=12% Similarity=0.083 Sum_probs=162.1
Q ss_pred CCCcccchh----hhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCC-cEEEeeccc
Q 024997 1 MPFYPLYQE----QTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPY-AKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~----~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~-~~vi~De~y 69 (259)
+|+|+.... .++..|.++..+.. |+++|++.+++++++|++++|+||||.++ .++|+++| +++|+|++|
T Consensus 112 ~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~ 191 (403)
T 3cog_A 112 DDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTF 191 (403)
T ss_dssp SSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTT
T ss_pred CCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCC
Confidence 467765333 23445666544433 78889999988999999999999999998 38999999 999999999
Q ss_pred cCCC-CCCCCCCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCc
Q 024997 70 FWPH-FAPIPAPADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGN 147 (259)
Q Consensus 70 ~~~~-~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 147 (259)
..+. ..++ ..+.+++++|+||.++.+| +|+||++++++++++.+.......+...+++.++++.+.++
T Consensus 192 ~~~~~~~~~--~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~-------- 261 (403)
T 3cog_A 192 MSPYFQRPL--ALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLK-------- 261 (403)
T ss_dssp TCTTTCCTT--TTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT--------
T ss_pred cccccCCcc--ccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh--------
Confidence 3211 1122 2357899999999998665 58999999646899988887776667788888888777776
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCccc---cccccccccceeeC----CCCCeeEEEecCCCchHHHHHHHHHcCee
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSLQ---EIAPQYCTYFKKIR----PPSPAYAWVKCEREEDKDCYGILKAAKII 220 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 220 (259)
.+..+.++..++...+.+.+++.+.+... .+... ..+.... ..++++.| .++.. .+...+++++.||.
T Consensus 262 -~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~--p~~~~~~~~~~~~g~~~~~-~l~~~-~~~~~~~l~~~~i~ 336 (403)
T 3cog_A 262 -TLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSH--PQHELVKRQCTGCTGMVTF-YIKGT-LQHAEIFLKNLKLF 336 (403)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTS--TTHHHHHHHCSCCCSEEEE-EESSC-HHHHHHHHHHCSSS
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCC--CcHHHHHhcCCCCceEEEE-EecCC-HHHHHHHHHhCCcc
Confidence 23445677778888888888876532211 12221 0122122 23566655 56543 35677788888886
Q ss_pred eec---CC----------c--c----------cCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 221 GRE---GK----------K--F----------RAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 221 ~~~---g~----------~--f----------~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
++. |. . . +.+++++|||++. +++.++.+.+.|+++++
T Consensus 337 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 337 TLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp EECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHCC
T ss_pred eEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhhc
Confidence 542 21 1 1 2236899999987 33445555555555443
No 114
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=6.9e-24 Score=184.53 Aligned_cols=232 Identities=10% Similarity=0.015 Sum_probs=168.5
Q ss_pred CCCcccchhhhhhccCcccccc-cChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc----
Q 024997 1 MPFYPLYQEQTDYFESVDYKFE-GEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY---- 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y---- 69 (259)
+|+|+.+...++..|.++..+. .|+++|++.+.+ +++++++++|+||||.++ .++|+++|+++|+||+|
T Consensus 150 ~~~~~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~ 229 (409)
T 3kki_A 150 FFAHMSLWEGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGT 229 (409)
T ss_dssp TTSCHHHHHHHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred CCcCHHHHHHHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccc
Confidence 4788888888888888776553 688899998854 579999999999999987 38999999999999999
Q ss_pred cCCCCCCCC---C-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHh
Q 024997 70 FWPHFAPIP---A-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLE 143 (259)
Q Consensus 70 ~~~~~~~~~---~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~ 143 (259)
|++...... + ..+.++++.|+||.++.+| ||++++ +++++.+...... .....++..+.++.+.++..
T Consensus 230 ~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~-- 303 (409)
T 3kki_A 230 HGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCN-NEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII-- 303 (409)
T ss_dssp SSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEES-SSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--
T ss_pred cCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEEC-HHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--
Confidence 221111111 1 2345799999999998665 999999 5888877764332 23345666666666677642
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeee
Q 024997 144 DGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGR 222 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~ 222 (259)
...++.+++++++++.+.+.|++++ +... ..+.++|+.++.. +...+.+.|.++||.++
T Consensus 304 ----~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~ 363 (409)
T 3kki_A 304 ----ESADNRRQHLDRMARKLRIGLSQLG--------------LTIR--SESQIIGLETGDERNTEKVRDYLESNGVFGS 363 (409)
T ss_dssp ----HHCHHHHHHHHHHHHHHHHHHHTTT--------------CCCC--CSSSEEEEEEESHHHHHHHHHHHHHTTEECE
T ss_pred ----hcCHHHHHHHHHHHHHHHHHHHHcC--------------CccC--CCCCEEEEEeCCHHHHHHHHHHHHHCCceEe
Confidence 1225678889999999999998763 2222 3677888887653 23334444456699998
Q ss_pred cCCcccC--CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 223 EGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 223 ~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
++..+.. +.+++||++.. +++++++++++|++++++
T Consensus 364 ~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 364 VFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp EECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 8654322 46799999974 899999999999998864
No 115
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=7.5e-25 Score=187.74 Aligned_cols=230 Identities=10% Similarity=0.044 Sum_probs=163.0
Q ss_pred CCCcccchhhhhhccCcccc--------cccChhhhcccCC-----CCceEEEEcCCCCCChhhH-----HHhhcCCCcE
Q 024997 1 MPFYPLYQEQTDYFESVDYK--------FEGEANLWGNASS-----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~-----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~ 62 (259)
+|+|+.+...++..|.++.. +.+|+++|++.++ ++++++++++|+||||.++ .++|+++|++
T Consensus 100 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~ 179 (371)
T 2e7j_A 100 ENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVP 179 (371)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred cCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCe
Confidence 58899888888888876522 4567888998886 7889999999999999987 3899999999
Q ss_pred EEeeccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHH-HHHhhh--hh-----cCCCCHHHHHH
Q 024997 63 SIYDHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQR-MSAYIS--LN-----TMGVSRECQLR 133 (259)
Q Consensus 63 vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~q~~ 133 (259)
+|+||+|..... +.. ...+.+++++|+||.++. +.|+||+++++ ++++. +..... .. ...++...+.+
T Consensus 180 li~D~a~~~~~~-~~~~~~~~~di~~~s~sK~~~~-~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 256 (371)
T 2e7j_A 180 LLVNGAYAIGRM-PVSLKEIGADFIVGSGHKSMAA-SGPIGVMGMKE-EWAEIVLRRSEKYKNKEVELLGCTARGATIIT 256 (371)
T ss_dssp EEEECTTTBTTB-CCCHHHHTCSEEEEEHHHHSSC-CSSCEEEEECT-TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHH
T ss_pred EEEECccccCCC-CCChhhcCCCEEEecCCcCCCC-CCCcEEEEEec-hhhhhhccccccCcccccccccCCcCHHHHHH
Confidence 999999931111 111 112356999999999874 45999999994 87776 654433 11 23344555555
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHH--HHHHHHHHHHHHhcCCCccccccccccccceeeCCC--CCeeEEEecCCCchHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTM--KKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP--SPAYAWVKCEREEDKD 209 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 209 (259)
+...++.. .. +..+++ +++++.+.+.|+++ + +....+. .+.++|++++ +.+.
T Consensus 257 ~~~~l~~~-----~~---~~~~~~~~~~~~~~l~~~L~~~-~-------------~~~~~~~~~~~~~~~~~~~--~~~~ 312 (371)
T 2e7j_A 257 LMASFPHV-----RE---RIKRWDEEVEKARRFAAEMEKL-G-------------IKQLGDNPHNHDLMFFHAE--VLYE 312 (371)
T ss_dssp HHHHHHHH-----HH---HGGGHHHHHHHHHHHHHHHHHT-T-------------CEEESSSSCCSSEEEEECH--HHHH
T ss_pred HHHHHHHH-----HH---HHHHHHHHHHHHHHHHHHHHHc-C-------------cEEecCCCccCceEEEECC--CHHH
Confidence 55566532 11 345666 78888888888875 2 3333332 3567899886 4444
Q ss_pred HHHHHHHcCeeeecCCcccC-----CCCeEE-EEee---cChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA-----EARFVR-LSLL---KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~-----~~~~~R-is~~---~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.|.++||.+.| ..+.. +++++| ++++ .+++++++++++|++++++
T Consensus 313 ~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 313 ISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp HHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 55556688999998 54432 268999 9998 5899999999999998764
No 116
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.90 E-value=3.2e-23 Score=177.00 Aligned_cols=212 Identities=12% Similarity=0.016 Sum_probs=152.5
Q ss_pred cChhhhcc-cCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEeccccccCCCcce
Q 024997 23 GEANLWGN-ASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLTGHAGSR 100 (259)
Q Consensus 23 ~d~~~l~~-~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 100 (259)
+|+++|++ .++++++++++++|+||||.+++++++++|+++|+|++|. +.....+.. ..++++|+||.+|.+|
T Consensus 128 ~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~~i~~~~~~~li~D~a~~~~~~~~~~~~---~di~~~s~sK~~~~~G-- 202 (360)
T 1w23_A 128 QSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDILSRPLKVNQ---FGMIYAGAQKNLGPSG-- 202 (360)
T ss_dssp CSCCCGGGCCCCTTEEEEEEESEETTTTEECSSCCCCCSSCEEEECTTTTTSSCCCGGG---CSEEEEETTTTTSCTT--
T ss_pred CCccchHhhccCCCCCEEEEeCCCCCcceecccccccCCceEEEechhhcCCCCcCccc---CCEEEEEcccccCCCC--
Confidence 67788988 8888899999999999999998788889999999999992 111111211 1589999999999777
Q ss_pred EEEEEecCHHHHHHHHHhhh------------hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 101 FGWAVIKDEAVYQRMSAYIS------------LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~~~~~------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
+||++++ +++++.+..... .....++...+.++..+++... ....+++.+++++++++.+.+.|
T Consensus 203 ~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~---~~~~~~~~~~~~~~~~~~l~~~L 278 (360)
T 1w23_A 203 VTVVIVK-KDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK---DLGGAEAIAKQNEEKAKIIYDTI 278 (360)
T ss_dssp CEEEEEE-HHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEc-HHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999 688766544210 1112345566666666666321 11156778899999999999999
Q ss_pred HhcCCCccccccccccccceee--C-CCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--Ch
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKI--R-PPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQ 242 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~ 242 (259)
++++++ +... + ..+++++|++++.. +...+.+.|.++||.+++|..+ ++++|||++. ++
T Consensus 279 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~---~~~iRis~~~~~~~ 343 (360)
T 1w23_A 279 DESNGF------------YVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRS---VGGCRASIYNAVPI 343 (360)
T ss_dssp HTTTTS------------SEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCTT---TCSEEEECCTTSCH
T ss_pred HHccCc------------ccccCCchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCCC---CCeEEEEecCCCCH
Confidence 876531 1111 1 13566889988753 2333444466789999998764 4789999974 88
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
+++++++++|++++++
T Consensus 344 ~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 344 DACIALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998875
No 117
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.90 E-value=7.6e-23 Score=177.56 Aligned_cols=233 Identities=9% Similarity=-0.075 Sum_probs=166.3
Q ss_pred CCccc--chhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPL--YQEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~--~~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|+|+. +...++..|.++. .+.+|+++|++.+++ +++++++++||||||.+. .++|+++|+++|+|+
T Consensus 96 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 175 (411)
T 3nnk_A 96 FGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDA 175 (411)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEEC
T ss_pred CCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEEC
Confidence 67765 7777777777652 345688999998865 899999999999999987 489999999999999
Q ss_pred cc-cCCCCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhh--------------------------
Q 024997 68 AY-FWPHFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYI-------------------------- 119 (259)
Q Consensus 68 ~y-~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~-------------------------- 119 (259)
++ +....... ...+.++++.|+||.+ |.. ++||++++ +++++.+....
T Consensus 176 a~~~~~~~~~~-~~~~~d~~~~s~~K~l~~~~--g~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~ 251 (411)
T 3nnk_A 176 TASLGGNPLET-DVWGLDAVSAGMQKCLGGPS--GTSPITLS-ARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDL 251 (411)
T ss_dssp TTTBTTBCCCT-TTTTCSEEECCSTTTTCCCS--SEEEEEEC-HHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCH
T ss_pred CcccCCcccch-hccCCcEEEecCccccCCCC--ceEEEEEC-HHHHHHHhhcccccccccccccccccCCCCcccccch
Confidence 98 22111111 2335689999999974 544 58999999 69998887643
Q ss_pred ----------hhhcCCCCHHHHHHHHHHHHHHHhcCCcch-HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccce
Q 024997 120 ----------SLNTMGVSRECQLRAFKLLKVVLEDGGNNI-FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFK 188 (259)
Q Consensus 120 ----------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 188 (259)
.......+...+.++..+++.. ... +++.+++++++++.+.+.|++++ +.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~g--------------~~ 312 (411)
T 3nnk_A 252 GMVMDYWGPERLNHHTEATTALFGARECARLI-----LQEGLDYGIARHKLHGDALVKGIQAMG--------------LE 312 (411)
T ss_dssp HHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHTT--------------CC
T ss_pred HHHHhhhccccCCCCCCCHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHHHcC--------------CE
Confidence 0112344666666666666642 122 67788899999999999998763 11
Q ss_pred eeCC---CCCeeEEEecCC-Cch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEe-ec--ChhhHHHHHHHHHHHhhh
Q 024997 189 KIRP---PSPAYAWVKCER-EED-KDCYGILKAAKIIGREGKKFRAEARFVRLSL-LK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 189 ~~~~---~~~~~~~~~~~~-~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~--~~~~~~~~~~~l~~~l~~ 258 (259)
...+ ..+.++++.++. .+. ++...+++++||.+++|.... ..+++||++ +. +++++++++++|++++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 313 TFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPL-HGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp BCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGG-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred eCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCC-CCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 2222 236778888853 343 455555666699999984332 357999998 53 789999999999998764
No 118
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=4.9e-23 Score=178.66 Aligned_cols=236 Identities=11% Similarity=0.024 Sum_probs=162.3
Q ss_pred CCCcccchhhhhh----ccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEE
Q 024997 1 MPFYPLYQEQTDY----FESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~~~~~~----~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi 64 (259)
+|+|+.+...+.. .|.++. .+.+|+++|++.+++++++|++++|+||||.++ .++|+++|+++|
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 199 (406)
T 3cai_A 120 RLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVV 199 (406)
T ss_dssp TTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEE
T ss_pred CCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEE
Confidence 4677776555543 466542 234688999999988899999999999999998 389999999999
Q ss_pred eeccccCCCCCCCC-CCCCCeEEEeccccccCCCcceEE-EEEecCHHHHHHHHHhhh---------hhcCCCCHHHHHH
Q 024997 65 YDHAYFWPHFAPIP-APADEELMIFTISKLTGHAGSRFG-WAVIKDEAVYQRMSAYIS---------LNTMGVSRECQLR 133 (259)
Q Consensus 65 ~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G-~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~q~~ 133 (259)
+|++|.... ..+. ...+.+++++|+||.+| ++ +| |++++ +++++.+..... .....++.+.+.+
T Consensus 200 ~D~a~~~g~-~~~~~~~~~~d~~~~s~~K~~g-~~--~G~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a 274 (406)
T 3cai_A 200 VDHSAAAPY-RLLDIRETDADVVTVNAHAWGG-PP--IGAMVFRD-PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAG 274 (406)
T ss_dssp EECTTTTTT-CCCCHHHHCCSEEEEEGGGGTS-CS--CEEEEESC-HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHH
T ss_pred EEcccccCC-CCCCchhcCCCEEEeehhhhcC-CC--cCeEEEEe-hHHHhhcCCcccCCCCCccccccCCCccHHHHHH
Confidence 999993111 1111 12246899999999887 55 89 99998 688877654421 1123345555555
Q ss_pred HHHHHHHHHhcC----------CcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC---CCCeeEEE
Q 024997 134 AFKLLKVVLEDG----------GNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP---PSPAYAWV 200 (259)
Q Consensus 134 ~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 200 (259)
+..+++...+.+ .+.++++.+++++++++.+.+.|+++++ +....+ .++ ++++
T Consensus 275 ~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------------~~~~~~~~~~~~-~~~~ 340 (406)
T 3cai_A 275 VVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPL-------------VMLIGRPEAQIP-VVSF 340 (406)
T ss_dssp HHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT-------------EEECCCCSSBCS-EEEE
T ss_pred HHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCC-------------eEEcCCccccCC-EEEE
Confidence 555555321100 0014677888899999999999987654 222233 244 6777
Q ss_pred ecCCCchHHHHHHHHHcCeeeecCC------cccC--CCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 201 KCEREEDKDCYGILKAAKIIGREGK------KFRA--EARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 201 ~~~~~~~~~~~~ll~~~gi~~~~g~------~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
.++..+.+.+.+.|.++||.+++|. .|+. +.+++|++++. +++++++++++|+++
T Consensus 341 ~~~~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 341 AVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EETTBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EECCcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 7765445556666667899999987 3442 25899999976 789999999998764
No 119
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.90 E-value=6.5e-23 Score=176.78 Aligned_cols=232 Identities=10% Similarity=0.028 Sum_probs=162.4
Q ss_pred hhhhhhccCccc------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-cCCCC
Q 024997 8 QEQTDYFESVDY------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-FWPHF 74 (259)
Q Consensus 8 ~~~~~~~g~~~~------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-~~~~~ 74 (259)
...++..|.++. .+.+|+++|++.+++ +++++++++||||||.++ .++|+++|+++|+||+| ++...
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~ 193 (393)
T 3kgw_A 114 AEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVP 193 (393)
T ss_dssp HHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSC
T ss_pred HHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcc
Confidence 455556676542 235788999999876 899999999999999987 39999999999999998 22111
Q ss_pred CCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhh-----------------------hcCCCCHHH
Q 024997 75 APIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISL-----------------------NTMGVSREC 130 (259)
Q Consensus 75 ~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~ 130 (259)
... ...+.++++.|+||.+ |.+| +||++++ +++++.+...... ....++...
T Consensus 194 ~~~-~~~~~d~~~~s~sK~~~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (393)
T 3kgw_A 194 IYM-DQQGIDIMYSSSQKVLNAPPG--ISLISFN-DKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTS 269 (393)
T ss_dssp CCT-TTTTCCEEEEESSSTTCCCSS--CEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHH
T ss_pred cch-hhcCCCEEEecCcccccCCCc--eeEEEEC-HHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHH
Confidence 111 2345688999999976 4455 8999999 6999888653211 123456666
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-Cc-hH
Q 024997 131 QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-EE-DK 208 (259)
Q Consensus 131 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 208 (259)
+.++...++.. .+..+++.+++++++++.+.+.|++++ +.+. .+ ......++++++.++. .+ .+
T Consensus 270 ~~a~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
T 3kgw_A 270 LYCLRESLALI----AEQGLENCWRRHREATAHLHKHLQEMG-LKFF--VK-------DPEIRLPTITTVTVPAGYNWRD 335 (393)
T ss_dssp HHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBS--SS-------SGGGBCSSEEEEECCTTBCHHH
T ss_pred HHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHcC-Ceec--cC-------ChhhcCCeEEEEeCCCCCCHHH
Confidence 66666666632 122367788999999999999999863 2111 00 0012335667777753 23 34
Q ss_pred HHHHHHHHcCeeeecCCcccCCCCeEEEEe-ec--ChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRAEARFVRLSL-LK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.+++|..+. .++++|+++ +. +++++++++++|++++++
T Consensus 336 ~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 336 IVSYVLDHFSIEISGGLGPT-EERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp HHHHHHHHHCEECBCCCGGG-TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCCcccC-CCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 55555555599999988644 358999998 63 889999999999998864
No 120
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.90 E-value=1.2e-22 Score=176.18 Aligned_cols=236 Identities=11% Similarity=-0.013 Sum_probs=166.5
Q ss_pred CCCcccch---hhhhhccCc--c-------cccccChhhhcccCCC-CceEEEEcCCCCCChhhH---HHhhcCCCcEEE
Q 024997 1 MPFYPLYQ---EQTDYFESV--D-------YKFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN---KAVLKGPYAKSI 64 (259)
Q Consensus 1 ~P~y~~~~---~~~~~~g~~--~-------~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi 64 (259)
+|+|+.+. ..++..|.. . ..+.+|+++|++.+++ +++++++++|+||+-.-+ .++|+++|+++|
T Consensus 116 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li 195 (407)
T 2dkj_A 116 DLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLV 195 (407)
T ss_dssp CGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEE
T ss_pred cccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEE
Confidence 47787773 444444431 1 1467888999988864 788888899999843323 388999999999
Q ss_pred eecccc-----CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHH-HHHHHH
Q 024997 65 YDHAYF-----WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQL-RAFKLL 138 (259)
Q Consensus 65 ~De~y~-----~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l 138 (259)
+||+|. ....... ....+++++|+||.+ +|.|+||++++++++++.+.........+.+.+.+. ++..++
T Consensus 196 ~Dea~~~g~~~~~~~~~~--~~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al 271 (407)
T 2dkj_A 196 VDMAHFAGLVAAGLHPNP--LPYAHVVTSTTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAF 271 (407)
T ss_dssp EECTTTHHHHHTTCSCCC--TTTCSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHH
T ss_pred EEccccccccccCccCCc--cccccEEEEeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHH
Confidence 999982 1111111 123689999999955 588999999984589988887665444444444344 555666
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHHHHHHH
Q 024997 139 KVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDCYGILK 215 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ll~ 215 (259)
+.. ...++++.+++++++++.+.+.|++++ +.... +..+.++|++++.. +.+.+.+.|.
T Consensus 272 ~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (407)
T 2dkj_A 272 FEA----LQPEFKEYSRLVVENAKRLAEELARRG--------------YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLD 333 (407)
T ss_dssp HHH----HSHHHHHHHHHHHHHHHHHHHHHHHTT--------------CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred HHH----HHhhHHHHHHHHHHHHHHHHHHHHhCC--------------ceeecCCCCceEEEEECcccCCCHHHHHHHHH
Confidence 532 134677889999999999999998763 22222 45678889998742 4555666677
Q ss_pred HcCeeeecCCcc----c-CCCCeEEEEee------cChhhHHHHHHHHHHHhhh
Q 024997 216 AAKIIGREGKKF----R-AEARFVRLSLL------KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 216 ~~gi~~~~g~~f----~-~~~~~~Ris~~------~~~~~~~~~~~~l~~~l~~ 258 (259)
++||.+++|..+ + ..++++|+|++ .+++++++++++|++++++
T Consensus 334 ~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 334 AVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred HcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 899999998754 2 13578999995 5899999999999998764
No 121
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.90 E-value=7.8e-24 Score=183.45 Aligned_cols=207 Identities=11% Similarity=0.092 Sum_probs=148.0
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChh-hH--------HHhhcCCCcEEEeeccc--cCCCCCCC--C--CCCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQ-MN--------KAVLKGPYAKSIYDHAY--FWPHFAPI--P--APADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~-~~--------~~la~~~~~~vi~De~y--~~~~~~~~--~--~~~~~~i~~ 87 (259)
.|+++|++.++++++++++++||||||. ++ .++|+++|+++|+||+| |....... . +.... +
T Consensus 171 ~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d---~ 247 (397)
T 2ord_A 171 NNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPD---V 247 (397)
T ss_dssp TCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS---E
T ss_pred CCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCC---e
Confidence 4788899999888999999999999998 43 38899999999999999 32111111 1 11112 2
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
.||||.++ +|+|+||+++++ +++ .+.......+++++++.|.++.++++.. .. ++.+++++++++.+.+.
T Consensus 248 ~s~sK~~~-~G~r~G~~~~~~-~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~----~~~~~~~~~~~~~l~~~ 317 (397)
T 2ord_A 248 LTTAKGLG-GGVPIGAVIVNE-RAN-VLEPGDHGTTFGGNPLACRAGVTVIKEL---TK----EGFLEEVEEKGNYLMKK 317 (397)
T ss_dssp EEECGGGG-TTSCCEEEEECS-TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHH---TS----TTHHHHHHHHHHHHHHH
T ss_pred eeeccccC-CCcCeEEEEEch-Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHH---Hh----CCHHHHHHHHHHHHHHH
Confidence 38899999 899999999995 776 5543333445678999999999988853 11 34577888889999888
Q ss_pred HHhcC-CCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChh
Q 024997 168 ISLSN-RFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQD 243 (259)
Q Consensus 168 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~ 243 (259)
|+++. ++. .+....+ .|.++|++++.. +.+.+.+.|.++||.++|| +++++|+++. .+++
T Consensus 318 L~~~~~~~~----------~~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~-----~~~~iRis~~~~~~~e 381 (397)
T 2ord_A 318 LQEMKEEYD----------VVADVRG-MGLMIGIQFREEVSNREVATKCFENKLLVVPA-----GNNTIRFLPPLTVEYG 381 (397)
T ss_dssp HHHHHHHCT----------TEEEEEE-ETTEEEEEECTTSCHHHHHHHHHHTTEECEEE-----TTTEEEECCCTTCCHH
T ss_pred HHHHHHhCC----------ceEEEEE-EeEEEEEEECChHHHHHHHHHHHHCCCEEccC-----CCCEEEEECCcCCCHH
Confidence 87653 110 0111223 356778888653 3444445555689999996 2579999964 4899
Q ss_pred hHHHHHHHHHHHhhh
Q 024997 244 DFDLLLHRLDELISK 258 (259)
Q Consensus 244 ~~~~~~~~l~~~l~~ 258 (259)
++++++++|++++++
T Consensus 382 ~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 382 EIDLAVETLKKVLQG 396 (397)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 122
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.90 E-value=1e-22 Score=175.85 Aligned_cols=233 Identities=12% Similarity=-0.033 Sum_probs=158.7
Q ss_pred CCcccch--hhhhhccCcccc------cccChhhhcccC--CCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 2 PFYPLYQ--EQTDYFESVDYK------FEGEANLWGNAS--SDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 2 P~y~~~~--~~~~~~g~~~~~------~~~d~~~l~~~~--~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
|+|+.+. ..++..|.++.. +.+|+++|++.+ +++++++++++|+||||.++ .++|+++|+++|+|
T Consensus 91 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 170 (392)
T 2z9v_A 91 SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVD 170 (392)
T ss_dssp SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEE
T ss_pred CCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEE
Confidence 5666542 333445665522 247888999888 46889999999999999987 38999999999999
Q ss_pred ccc-cCCCCCCCCCCCCCeEEEeccccc-cCCCcceEEEEEecCHHHHHHHHHhh--------------------hhhcC
Q 024997 67 HAY-FWPHFAPIPAPADEELMIFTISKL-TGHAGSRFGWAVIKDEAVYQRMSAYI--------------------SLNTM 124 (259)
Q Consensus 67 e~y-~~~~~~~~~~~~~~~i~~~S~SK~-~g~~G~R~G~i~~~~~~~~~~~~~~~--------------------~~~~~ 124 (259)
++| ++.....+ ...+.+++++|+||. +|.+|+ ||++++ +++++.++... .....
T Consensus 171 ~a~~~g~~~~~~-~~~~~d~~~~s~sK~~~~~~g~--G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (392)
T 2z9v_A 171 AVSSFGGMKTHP-EDCKADIYVTGPNKCLGAPPGL--TMMGVS-ERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPF 246 (392)
T ss_dssp CTTTBTTBSCCG-GGGTCSEEEECSSSTTCCCSCC--EEEEEC-HHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSS
T ss_pred cccccCCccccc-ccccceEEEecCcccccCCCce--eEEEEC-HHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCC
Confidence 998 32111111 122467999999995 455674 999999 69888886421 11123
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcch-HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-C---CCCeeEE
Q 024997 125 GVSRECQLRAFKLLKVVLEDGGNNI-FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-P---PSPAYAW 199 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~ 199 (259)
.++...+.++..+++.. ... +++.+++++++++.+.+.|+++ ++. ... + ..+.+++
T Consensus 247 ~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-------------~~~~~~~~~~~~~~~ 307 (392)
T 2z9v_A 247 TPSVSEINGLDVALDLY-----LNEGPEAVWARHALTAKAMRAGVTAM-GLS-------------VWAASDSIASPTTTA 307 (392)
T ss_dssp CCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-------------BSSSSGGGBCTTEEE
T ss_pred CCCHHHHHHHHHHHHHH-----HhccHHHHHHHHHHHHHHHHHHHHHc-CCe-------------eccCCccccCCceEE
Confidence 34555555555566532 122 5677888999999999999876 322 122 2 2466778
Q ss_pred EecCC-Cch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEe-e--cChhhHHHHHHHHHHHhhh
Q 024997 200 VKCER-EED-KDCYGILKAAKIIGREGKKFRAEARFVRLSL-L--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 200 ~~~~~-~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+.++. .+. ++...+++++||.+++|..+. ..+++|+++ + .+++++++++++|++++++
T Consensus 308 ~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~-~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 308 VRTPDGVDEKALRQAARARYGVVFSSGRGET-LGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECEECCGGG-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhcCCEEEecCCCCC-CCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 88753 344 444444444499999988654 358999994 5 4999999999999988753
No 123
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.90 E-value=1.1e-23 Score=182.39 Aligned_cols=234 Identities=12% Similarity=0.017 Sum_probs=144.9
Q ss_pred CCCcccchhhhhhc---cCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYF---ESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~---g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|.||.+...+... |.++. .+.+|+++|++.++++++++++++||||||.++ .++|+++|+++|+|
T Consensus 116 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D 195 (400)
T 3vax_A 116 AIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVD 195 (400)
T ss_dssp TTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEE
T ss_pred ccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEE
Confidence 35677776666553 55542 345788999999988999999999999999987 38999999999999
Q ss_pred cccc-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEE-ecCHHHH---HHHHHhh-------hhhcCCCCHHHHHHH
Q 024997 67 HAYF-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAV-IKDEAVY---QRMSAYI-------SLNTMGVSRECQLRA 134 (259)
Q Consensus 67 e~y~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~-~~~~~~~---~~~~~~~-------~~~~~~~~~~~q~~~ 134 (259)
++|- ......+... .+++++|+||.+|.+| +|+++ ++++++. ..+.... ......++...+.++
T Consensus 196 ~a~~~~~~~~~~~~~--~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 271 (400)
T 3vax_A 196 AAQGYGKVPGDLTTP--IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGL 271 (400)
T ss_dssp CTTTTTTSGGGGGSC--CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHH
T ss_pred hhhhcCCCCcChhhc--CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHH
Confidence 9982 1111112122 5789999999888666 56666 6631221 1111111 112334566666666
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCC---CeeEEEecCCCchHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPS---PAYAWVKCEREEDKDCY 211 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 211 (259)
..+++.. .+.+++.+++++++++.+.+.|+ .++ +....+.+ +.++++.++..+.+.+.
T Consensus 272 ~~al~~~-----~~~~~~~~~~~~~~~~~l~~~L~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 332 (400)
T 3vax_A 272 AEAAKIF-----EAEHAQWQVAAQDLRSRLLAGLA-STS-------------FQVNGDQDHVVPHILNLSFEDVDAEAFL 332 (400)
T ss_dssp HHHHHHH-----HHSHHHHHHHHHHHHHHHHHHHT-TTT-------------CEECSCTTSBCTTEEEEECTTCCHHHHH
T ss_pred HHHHHHH-----HhhHHHHHHHHHHHHHHHHHhhC-CCC-------------EEEeCCcccCCCCEEEEEeCCCCHHHHH
Confidence 6666632 23567788899999999999987 554 22333333 34666677655566666
Q ss_pred HHHHHcCeeeecCCcccCC------------------CCeEEEEe-ec--ChhhHHHHHHHHHHHhhh
Q 024997 212 GILKAAKIIGREGKKFRAE------------------ARFVRLSL-LK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~~~------------------~~~~Ris~-~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+.|. +||.+++|..|... .+++||++ +. +++++++++++|++++++
T Consensus 333 ~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 333 VTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred HHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 6777 89999998766431 48999999 64 789999999999988753
No 124
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.89 E-value=2.3e-22 Score=174.79 Aligned_cols=233 Identities=10% Similarity=-0.023 Sum_probs=163.4
Q ss_pred CCccc--chhhhhhccCccc------ccccChhhhcccCC-CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeec
Q 024997 2 PFYPL--YQEQTDYFESVDY------KFEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDH 67 (259)
Q Consensus 2 P~y~~--~~~~~~~~g~~~~------~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De 67 (259)
|+|+. +...++..|.++. .+.+|+++|++.++ ++++++++++||||||.++ .++|+++|+++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 173 (416)
T 3isl_A 94 YGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDA 173 (416)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEEC
T ss_pred CCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEEC
Confidence 66665 6666777777652 23568889999886 5889999999999999987 389999999999999
Q ss_pred cc-cCCCCCCCCCCCCCeEEEeccccc-cCCCcceEEEEEecCHHHHHHHHHhh--------------------------
Q 024997 68 AY-FWPHFAPIPAPADEELMIFTISKL-TGHAGSRFGWAVIKDEAVYQRMSAYI-------------------------- 119 (259)
Q Consensus 68 ~y-~~~~~~~~~~~~~~~i~~~S~SK~-~g~~G~R~G~i~~~~~~~~~~~~~~~-------------------------- 119 (259)
+| ++...... ...+.++++.|+||. +|..| +|+++++ +++++.+....
T Consensus 174 a~~~~~~~~~~-~~~~~d~~~~s~~K~l~g~~g--~g~~~~~-~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~ 249 (416)
T 3isl_A 174 VATIGGCEVKV-DEWKIDAAIGGTQKCLSVPSG--MAPITYN-ERVADVIAARKKVERGIATQADRAALSGNRPITSNYF 249 (416)
T ss_dssp TTTTTTSCCCT-TTTTCSEEECCSSSTTCCCSS--EEEEEEC-HHHHHHHHTC------------------CCCCSCSTT
T ss_pred CccccCCCcch-hhcCCCEEEecCccccCCCCC--eEEEEEC-HHHHHHhhccccccccccccccchhccCCCCCCcccc
Confidence 98 22111111 233568999999997 45444 8999999 69988877421
Q ss_pred ------------hhhcCCCCHHHHHHHHHHHHHHHhcCCcch-HHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q 024997 120 ------------SLNTMGVSRECQLRAFKLLKVVLEDGGNNI-FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTY 186 (259)
Q Consensus 120 ------------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 186 (259)
......++...+.++..+++.. ..+ +++.+++++++++.+.+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~g-------------- 310 (416)
T 3isl_A 250 DLSQLEDYWSERRLNHHTEATTMLYALREGVRLV-----LEEGLETRFERHRHHEAALAAGIKAMG-------------- 310 (416)
T ss_dssp CHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHTT--------------
T ss_pred chHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHHHcC--------------
Confidence 0112244666666666666642 223 67888999999999999998753
Q ss_pred ceeeCCC---CCeeEEEecCC-Cch-HHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--Chhh-HHHHHHHHHHHhhh
Q 024997 187 FKKIRPP---SPAYAWVKCER-EED-KDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDD-FDLLLHRLDELISK 258 (259)
Q Consensus 187 ~~~~~~~---~~~~~~~~~~~-~~~-~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~-~~~~~~~l~~~l~~ 258 (259)
+....++ .+.++++.++. .+. ++...+++++||.+++|.... .++++|+++.. ++++ +++++++|++++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 311 LRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPL-AGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp CCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTT-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCC-CCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 2222332 35677788753 344 445555555599999987432 35899999932 5555 99999999998763
No 125
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.89 E-value=4.9e-22 Score=171.68 Aligned_cols=244 Identities=11% Similarity=0.031 Sum_probs=157.7
Q ss_pred CCCcccchhh----hhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQ----TDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~----~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+..... ++..|.++..+. .|++.|++.++++++++++++|+||||.++ .++|+++|+++|+||+|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~ 177 (386)
T 1cs1_A 98 HDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFL 177 (386)
T ss_dssp TTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred cCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 3666653322 244565554333 377889888888889999999999999987 389999999999999993
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
..... .+...+.+++++|+||.++.+|.|+ ||++++++++++.+.......+...+++.++++...++ +
T Consensus 178 ~~~~~-~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~---------~ 247 (386)
T 1cs1_A 178 SPALQ-NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---------T 247 (386)
T ss_dssp CTTTC-CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT---------T
T ss_pred ccccC-CccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc---------H
Confidence 11110 1112457899999999998899997 99999855888988877766556678887777665554 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccc-cccceeeC---CCCCeeEEEecCCCchHHHHHHHHHcCeeeecCC
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQY-CTYFKKIR---PPSPAYAWVKCEREEDKDCYGILKAAKIIGREGK 225 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~ 225 (259)
+.+..+.+.++.+.+.+.|++++.+.....+... ...+.... ...+.++.+.++.. .+.+...|+++||.+++.+
T Consensus 248 ~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~~~~~~ 326 (386)
T 1cs1_A 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-EQTLRRFLGGLSLFTLAES 326 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC-HHHHHHHHHTCSSSEEBSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC-HHHHHHHHHhCCcceEccc
Confidence 4556777888889998888876543211111100 00011111 11244455566543 4667777888999887421
Q ss_pred c---------------c----------cCCCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 226 K---------------F----------RAEARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 226 ~---------------f----------~~~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
. + +.+++++|+|++. ++++++.+.+.|+++
T Consensus 327 ~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 327 LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1 0 1225899999976 233344444444443
No 126
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=2.4e-23 Score=181.78 Aligned_cols=213 Identities=9% Similarity=-0.030 Sum_probs=144.5
Q ss_pred cChhhhcccCC-----CCceEEEE-cCCCCCCh-hhH--------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCe
Q 024997 23 GEANLWGNASS-----DTHLVEFV-TAPNNPDG-QMN--------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEE 84 (259)
Q Consensus 23 ~d~~~l~~~~~-----~~~~~i~i-~~p~NPtG-~~~--------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~ 84 (259)
+|+++|++.++ +++++|++ ++||| || .++ .++|+++|+++|+||+| |........ +..+..
T Consensus 182 ~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 260 (426)
T 1sff_A 182 DAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVA 260 (426)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSC
T ss_pred HHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCC
Confidence 47788888774 45666555 34578 99 444 28899999999999999 321111111 112223
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+.+.||||.++. |+|+||++++ +++++.+.......+.+++++.|.++.++++...+ + ...++++++++.+
T Consensus 261 ~di~s~sK~~~~-GlriG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~----~~~~~~~~~~~~l 331 (426)
T 1sff_A 261 PDLTTFAKSIAG-GFPLAGVTGR-AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---E----NLLQKANDLGQKL 331 (426)
T ss_dssp CSEEEECGGGGT-SSCCEEEEEE-HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---T----THHHHHHHHHHHH
T ss_pred CCEEEEcccccC-CCceEEEEEc-HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---c----CHHHHHHHHHHHH
Confidence 335599999995 9999999999 68888776544445677899999999888774311 1 2356677777777
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC---------CchHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER---------EEDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
.+.|+.+.. .++. +....+. |+++|+++.. .+.+.+.+.|.++||.++||..+ ++++|
T Consensus 332 ~~~l~~~~~----~~~~-----~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~---~~~iR 398 (426)
T 1sff_A 332 KDGLLAIAE----KHPE-----IGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPY---YNVLR 398 (426)
T ss_dssp HHHHHHHHH----TCTT-----EEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTT---SCEEE
T ss_pred HHHHHHHHH----hCCC-----eEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCC---CCEEE
Confidence 777765431 0110 2223444 7788998842 12333444455689999998764 48999
Q ss_pred EEee--cChhhHHHHHHHHHHHhhh
Q 024997 236 LSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 236 is~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
|+++ .+++++++++++|++++++
T Consensus 399 i~~~~~~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 399 ILVPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCccCCHHHHHHHHHHHHHHHHH
Confidence 9986 3999999999999998753
No 127
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.89 E-value=1.7e-22 Score=173.87 Aligned_cols=226 Identities=8% Similarity=0.029 Sum_probs=156.9
Q ss_pred hhhhhccCccc-------ccccChhhhcccCCC-CceEEEEcCCCCCChhhH-----HHhhcCC--CcEEEeeccc-cCC
Q 024997 9 EQTDYFESVDY-------KFEGEANLWGNASSD-THLVEFVTAPNNPDGQMN-----KAVLKGP--YAKSIYDHAY-FWP 72 (259)
Q Consensus 9 ~~~~~~g~~~~-------~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~-----~~la~~~--~~~vi~De~y-~~~ 72 (259)
..++..|.++. .+.+|+++|++.+++ ++++|++++|+||||.++ .++|+++ |+++|+|++| ++.
T Consensus 103 ~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~ 182 (385)
T 2bkw_A 103 DCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGC 182 (385)
T ss_dssp HHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTT
T ss_pred HHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCC
Confidence 44555566542 234688889988865 789999999999999987 3889999 9999999999 321
Q ss_pred CCCCCCCCCCCeEEEecccccc-CCCcceEEEEEecCHHHHH-HHH------------------Hhh-hhh------cCC
Q 024997 73 HFAPIPAPADEELMIFTISKLT-GHAGSRFGWAVIKDEAVYQ-RMS------------------AYI-SLN------TMG 125 (259)
Q Consensus 73 ~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~-~~~------------------~~~-~~~------~~~ 125 (259)
....+ ...+.+++++|+||.+ |.+| +||++++ +++++ .+. ... ... ...
T Consensus 183 ~~~~~-~~~~~d~~~~s~~K~~~~~~G--~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (385)
T 2bkw_A 183 EEFEF-DEWGVDFALTASQKAIGAPAG--LSISLCS-SRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFAT 258 (385)
T ss_dssp SCCCT-TTTTCSEEEEESSSTTCCCSC--EEEEEEC-HHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSC
T ss_pred ccccc-cccCceEEEecCccccccCCc--ceEEEEc-HHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCC
Confidence 11122 2234688999999965 4677 5999998 57776 442 111 111 124
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH-HhcCCCccccccccccccceeeCC-----CCCeeEE
Q 024997 126 VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII-SLSNRFSLQEIAPQYCTYFKKIRP-----PSPAYAW 199 (259)
Q Consensus 126 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 199 (259)
++...+.++..+++... +..+++.+++++++++.+.+.| +++ + +....+ ..+.++|
T Consensus 259 ~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~~-g-------------~~~~~~~~~~~~~~~~~~ 320 (385)
T 2bkw_A 259 PPVQLINSLDVALKEIL----EEGLHKRWDLHREMSDWFKDSLVNGL-Q-------------LTSVSRYPSNMSAHGLTA 320 (385)
T ss_dssp CCHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHTTT-C-------------CEESSCSSSTTBCSSCEE
T ss_pred CCHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHHHHHHHHHhc-C-------------ceecccCcccccCCceEE
Confidence 56666666666666421 1125667888899999999998 765 2 222221 2577888
Q ss_pred EecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEE-ee-----cChhhHHHHHHHHHHHhhh
Q 024997 200 VKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLS-LL-----KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 200 ~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris-~~-----~~~~~~~~~~~~l~~~l~~ 258 (259)
+.++. .+.+.+.|.++||.+++|..+....+++||| ++ .+++++++++++|++++++
T Consensus 321 ~~~~~--~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 321 VYVAD--PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp EECSC--HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EecCC--HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 88875 3444455567899999998765556899999 76 3889999999999998753
No 128
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.89 E-value=3.1e-22 Score=174.50 Aligned_cols=242 Identities=12% Similarity=0.102 Sum_probs=160.2
Q ss_pred CCCcccchhhhhh----ccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQTDY----FESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~----~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...++. .|.++..+.. |+++|++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-
T Consensus 127 ~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~ 206 (414)
T 3ndn_A 127 RSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFA 206 (414)
T ss_dssp SCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCc
Confidence 4778877766644 6666543333 77889999988999999999999999997 389999999999999982
Q ss_pred CCC-CCCCCCCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHH-HHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCc
Q 024997 71 WPH-FAPIPAPADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQ-RMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGN 147 (259)
Q Consensus 71 ~~~-~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 147 (259)
.+. ..++ ..+.++++.|+||.+|.+| +|+|+++++ ++.+. .+...........++...+++...++
T Consensus 207 ~~~~~~~~--~~g~div~~S~sK~l~~~G~~~~G~vv~~-~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-------- 275 (414)
T 3ndn_A 207 TPLLQQGF--PLGVDVVVYSGTKHIDGQGRVLGGAILGD-REYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-------- 275 (414)
T ss_dssp HHHHCCCG--GGTCSEEEEETTTTTTCSSCCCCEEEEEC-HHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG--------
T ss_pred ccccCCch--hcCCCeEeccCCccccCCCCceEEEEEEC-HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH--------
Confidence 000 0111 2234789999999999878 899999999 57665 66655555555666665554444443
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc----ccceeeCCCCCeeEEEecCCC------chHHHHHHHHHc
Q 024997 148 NIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYC----TYFKKIRPPSPAYAWVKCERE------EDKDCYGILKAA 217 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~ 217 (259)
.+..+.++..++++.+.+.|++.+.+.....+.... ..++......|..+++.++.. ..+.+...++..
T Consensus 276 -~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~ 354 (414)
T 3ndn_A 276 -TLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLI 354 (414)
T ss_dssp -GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSS
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccc
Confidence 566677888999999999999876543222221000 000011123467888888652 123344444455
Q ss_pred CeeeecCCcc----------------------cCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 218 KIIGREGKKF----------------------RAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 218 gi~~~~g~~f----------------------~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
++.+.+|..+ +..++.+|||++. ++.+++++.|.+.|
T Consensus 355 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 355 DISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp EECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred eEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 6777777533 2246799999987 44555566665554
No 129
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.89 E-value=7.1e-22 Score=171.15 Aligned_cols=244 Identities=13% Similarity=0.037 Sum_probs=163.8
Q ss_pred CCCcccchhhh----hhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQT----DYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...+ +..|.++..+.. |+++|++.+++++++|++++|+||||.+. .++|+++|+++|+|++|-
T Consensus 112 ~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~ 191 (392)
T 3qhx_A 112 DDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFA 191 (392)
T ss_dssp TTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCc
Confidence 36676655544 444555433332 67889999999999999999999999987 389999999999999982
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
.+ ...-+...+.++++.|+||.+|.+| +|+||++++++++.+.+.......+.+.++..++++...++ .
T Consensus 192 ~~-~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~---------~ 261 (392)
T 3qhx_A 192 SP-ALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLK---------T 261 (392)
T ss_dssp CT-TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---------T
T ss_pred cc-ccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh---------H
Confidence 11 1111112345799999999998777 89999999866899988888777778888988888777766 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeec
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~ 223 (259)
+..+.++..++.+.+.+.|++.+.+.....+..... .+.......|..+++.++.. ..+.+...++..++.+..
T Consensus 262 l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~ 341 (392)
T 3qhx_A 262 LVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESL 341 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCC
Confidence 445677888888999999988764322211110000 00000112355678888752 233444445556777776
Q ss_pred CCccc-------------------CCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 224 GKKFR-------------------AEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 224 g~~f~-------------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
|..+. ..++.+|||++. ++.++.++.|.+.+
T Consensus 342 G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al 391 (392)
T 3qhx_A 342 GSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL 391 (392)
T ss_dssp CCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 65422 135789999987 45555666665554
No 130
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.89 E-value=9.2e-22 Score=170.26 Aligned_cols=242 Identities=11% Similarity=0.104 Sum_probs=165.8
Q ss_pred CCCcccchhh----hhhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQ----TDYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~----~~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+... ++..|.++..+. .|+++|++.++++++++++++|+||||.++ .++|+++|+++|+|++|.
T Consensus 105 ~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~ 184 (389)
T 3acz_A 105 DTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFT 184 (389)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 3677765544 355676654333 478889999988999999999999999997 389999999999999993
Q ss_pred CCCC-CCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 71 WPHF-APIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 71 ~~~~-~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
.... .++ ..+.+++++|+||.++.+|.|+ ||++++++++++.+.......+...++..++++.+.++
T Consensus 185 ~~~~~~~~--~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~--------- 253 (389)
T 3acz_A 185 SPCFLKPL--ELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMK--------- 253 (389)
T ss_dssp CTTTCCGG--GTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---------
T ss_pred cccccCcc--ccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcc---------
Confidence 1111 112 2356899999999999899998 99999933898888877765566677777777666665
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc-cccceeeC---CCCCeeEEEecCCCchHHHHHHHHHcCeeeec-
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQY-CTYFKKIR---PPSPAYAWVKCEREEDKDCYGILKAAKIIGRE- 223 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~- 223 (259)
.+..+.++..++...+.+.|++++.+.....+... ...+.... ...|.++.+.++. .+....++++.|+.+++
T Consensus 254 ~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~--~~~~~~~l~~~~i~~~~~ 331 (389)
T 3acz_A 254 TLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS--FEAAKKLMEHLKVCTLAV 331 (389)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--HHHHHHHHTTCSSSEEBS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC--HHHHHHHHHhCCCcEECc
Confidence 23445667778888888888887543222111100 00011111 1224455666754 56677888888998877
Q ss_pred --C------Ccc----------------cCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 224 --G------KKF----------------RAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 224 --g------~~f----------------~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
| ..+ +.+++.+|+|++.+ +.++.++.|.+.++
T Consensus 332 s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 332 SLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp CCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred CCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 4 222 12258999999773 66777777777765
No 131
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.89 E-value=1.6e-22 Score=177.10 Aligned_cols=215 Identities=13% Similarity=0.071 Sum_probs=133.5
Q ss_pred ChhhhcccCC----CCceEEEEcCC-CC-CChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCC-CCe
Q 024997 24 EANLWGNASS----DTHLVEFVTAP-NN-PDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APA-DEE 84 (259)
Q Consensus 24 d~~~l~~~~~----~~~~~i~i~~p-~N-PtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~-~~~ 84 (259)
|+++|++.++ +++++ ++++| +| |+|.+. .++|+++|+++|+||+| |........ ... +..
T Consensus 175 ~~~~le~~l~~~~~~~~~~-vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~ 253 (430)
T 3i4j_A 175 DAEGLRALLEREGPETVAA-FMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVT 253 (430)
T ss_dssp HHTHHHHHHHHHCGGGEEE-EEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCC
T ss_pred HHHHHHHHHHhcCCCCEEE-EEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCC
Confidence 3477888774 34555 55555 56 788743 38899999999999999 421111111 111 112
Q ss_pred EEEeccccccCCCc-ceEEEEEecCHHHHHHHHHh----hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY----ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKK 159 (259)
Q Consensus 85 i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (259)
..+.||||.++ .| +|+||++++ +++++.+... ....+++.+++.|.++.++++... .+++ .+.+++
T Consensus 254 ~di~t~sK~l~-~G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~~~~----~~~~~~ 324 (430)
T 3i4j_A 254 PDIAVLGKGLA-AGYAPLAGLLAA-PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVE---REDL----TGAAKE 324 (430)
T ss_dssp CSEEEECGGGT-TTSSCCEEEEEC-HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHH---HTTH----HHHHHH
T ss_pred CcEEEEccccc-CCccccEEEEEC-HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHH---cccH----HHHHHH
Confidence 22447999998 69 999999998 7999999874 444567899999999999988531 1233 444555
Q ss_pred HHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc----------hHHHHHHHHHcCeeeecCCccc-
Q 024997 160 RWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE----------DKDCYGILKAAKIIGREGKKFR- 228 (259)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~~~~g~~f~- 228 (259)
+.+.+.+.|+++. ..++ .+...++. |.++++.+.+.+ ...+.+.|.++||.++|+..+.
T Consensus 325 ~~~~~~~~l~~~~----~~~~-----~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 394 (430)
T 3i4j_A 325 RGAQLLAGLQALQ----ARFP-----QMMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEP 394 (430)
T ss_dssp HHHHHHHHHHHHH----HHCT-----TEEEEEEE-TTEEEEEEC------------CHHHHHHHHHHTTEECC-------
T ss_pred HHHHHHHHHHHHH----HhCC-----CeEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 5555555544321 0000 03333444 456666664221 1334455557899999984332
Q ss_pred -CCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 229 -AEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 -~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++||+++ .+++++++++++|++++++
T Consensus 395 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 395 NGRGDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp ----CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 24689999987 4899999999999998864
No 132
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.89 E-value=2.2e-22 Score=174.17 Aligned_cols=211 Identities=12% Similarity=0.036 Sum_probs=144.9
Q ss_pred ChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccc
Q 024997 24 EANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTIS 91 (259)
Q Consensus 24 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~S 91 (259)
|+++|++.+++++++++++.++||+|.+. .++|+++|+++|+||+| |+....... ...+....+.|+|
T Consensus 168 d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~s 247 (395)
T 3nx3_A 168 DISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSA 247 (395)
T ss_dssp CHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC
T ss_pred CHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEec
Confidence 78889999988888888888888888873 38899999999999998 322111111 1112222356899
Q ss_pred cccCCCcceEEEEEecCHHH-HHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 92 KLTGHAGSRFGWAVIKDEAV-YQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~~~~-~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
|.++ .|+|+||++++ +++ ++.+.......+++.+++.|.++.++++... .+++ .++++++.+.+.+.|++
T Consensus 248 K~~~-~G~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~---~~~~----~~~~~~~~~~~~~~l~~ 318 (395)
T 3nx3_A 248 KALG-CGLSVGAFVIN-QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFK---EEKI----LENVNKLTPYLEQSLDE 318 (395)
T ss_dssp GGGT-TTSCCEEEEEC-HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHH---HTTH----HHHHHHHHHHHHHHHHH
T ss_pred cccc-CCCceEEEEEc-hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHH---hhHH----HHHHHHHHHHHHHHHHH
Confidence 9998 59999999999 688 8887765555678889999999998887531 1233 34444444444444443
Q ss_pred cCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHH
Q 024997 171 SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDL 247 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~ 247 (259)
+.. .++ .+.... ..|.++|+.+... +...+.+.|.++||.++++. ++++||+++. +++++++
T Consensus 319 ~~~----~~~-----~~~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~iRi~~~~~~t~e~i~~ 383 (395)
T 3nx3_A 319 LIN----EFD-----FCKKRK-GLGFMQGLSLDKSVKVAKVIQKCQENALLLISCG-----ENDLRFLPPLILQKEHIDE 383 (395)
T ss_dssp HHH----HCT-----TEEEEE-EETTEEEEEECTTSCHHHHHHHHHHTTEECEEET-----TTEEEECCCTTCCHHHHHH
T ss_pred HHH----hCC-----CeEEEE-eEEEEEEEEeCCcchHHHHHHHHHHCCCEEecCC-----CCEEEEECCCCCCHHHHHH
Confidence 210 000 022222 3466778887653 34445555567899999853 5899998643 8999999
Q ss_pred HHHHHHHHhhh
Q 024997 248 LLHRLDELISK 258 (259)
Q Consensus 248 ~~~~l~~~l~~ 258 (259)
++++|++++++
T Consensus 384 ~l~~l~~~l~~ 394 (395)
T 3nx3_A 384 MSEKLRKALKS 394 (395)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 133
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.88 E-value=2.6e-22 Score=171.29 Aligned_cols=207 Identities=10% Similarity=-0.079 Sum_probs=146.0
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCC-hhhH--------HHhhcCCCcEEEeecccc-------CCCCCCCCCCCCCe
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPD-GQMN--------KAVLKGPYAKSIYDHAYF-------WPHFAPIPAPADEE 84 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPt-G~~~--------~~la~~~~~~vi~De~y~-------~~~~~~~~~~~~~~ 84 (259)
+.+|+++|++.. +++++++++||||| |.++ .++|+++|+++|+|++|. +.....+.. ...
T Consensus 123 ~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d 198 (357)
T 3lws_A 123 RLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAG--LFD 198 (357)
T ss_dssp SCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHT--TSS
T ss_pred CCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHh--cCC
Confidence 467888898873 38899999999998 8876 278999999999999872 111111111 123
Q ss_pred EEEecccccc-CCCcceEEEEEecCHHHHHHHHHhhhhhcC--CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 85 LMIFTISKLT-GHAGSRFGWAVIKDEAVYQRMSAYISLNTM--GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 85 i~~~S~SK~~-g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+++.|+||.+ +..| ||++++ +++++.+......... ....+.+.++...++. +.++ .+++.+++
T Consensus 199 ~~~~s~sK~~~~~~g---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~-~~~~~~~~ 265 (357)
T 3lws_A 199 SIYISFYKGLGGIAG---AILAGP-AAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL--------RKDR-MGQYYEQA 265 (357)
T ss_dssp EEEEESSSTTCCSSC---EEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--------HTTC-HHHHHHHH
T ss_pred EEEEeccccCCCCce---EEEEcC-HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH--------HHHH-HHHHHHHH
Confidence 4589999999 5455 999998 7999998876544322 2234445555555553 2222 33467788
Q ss_pred HHHHHHHHhcCCCcccccccccccccee-eCCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEE
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKK-IRPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLS 237 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris 237 (259)
+.+.+.|+++++ +.. ..+.+++++|++++.. +.+.+.+.|.++||.++||..+.++..++|++
T Consensus 266 ~~l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~ 332 (357)
T 3lws_A 266 KQLAEQFNALPG-------------VHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEIS 332 (357)
T ss_dssp HHHHHHHHTSTT-------------EEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEE
T ss_pred HHHHHHHHhCCC-------------CeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEE
Confidence 888899987654 444 2467788999998764 24556677778999999997766555689999
Q ss_pred ee-----cChhhHHHHHHHHHHHhh
Q 024997 238 LL-----KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 238 ~~-----~~~~~~~~~~~~l~~~l~ 257 (259)
++ .+.+++++++++|.+.++
T Consensus 333 i~~~~~~~~~~~l~~al~~l~~al~ 357 (357)
T 3lws_A 333 VGDAYGELDQQTRDAGFARLRQAFS 357 (357)
T ss_dssp BCTTGGGSCHHHHHHHHHHHHHHC-
T ss_pred ecchhhhcCHHHHHHHHHHHHHhcC
Confidence 86 267889999999988763
No 134
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.88 E-value=3.9e-21 Score=168.72 Aligned_cols=243 Identities=11% Similarity=0.022 Sum_probs=159.3
Q ss_pred CCcccchhh----hhhccCccccccc-ChhhhcccCCCCc-eEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 2 PFYPLYQEQ----TDYFESVDYKFEG-EANLWGNASSDTH-LVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 2 P~y~~~~~~----~~~~g~~~~~~~~-d~~~l~~~~~~~~-~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
|.|+.+... ++..|.++..+.. |+++|++.+++++ ++|++++|+||||.+. .++|+++|+++|+|++|.
T Consensus 161 ~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~ 240 (445)
T 1qgn_A 161 DCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFA 240 (445)
T ss_dssp TSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 566655443 3445665543332 6788998887778 9999999999999997 389999999999999993
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
.+.. ..+...+.+++++|+||.+|..| +++||++++ +++++.+...........+++..+++.+.++ .
T Consensus 241 ~~~~-~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~-~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~---------~ 309 (445)
T 1qgn_A 241 TPLN-QKALALGADLVLHSATKFLGGHNDVLAGCISGP-LKLVSEIRNLHHILGGALNPNAAYLIIRGMK---------T 309 (445)
T ss_dssp CTTT-CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---------G
T ss_pred cccc-CCccccCCEEEEECCcccccccccceEEEEEEC-HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH---------H
Confidence 1111 11112346799999999998655 589999999 6999988876665555556665555544444 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccc-ccc---ceeeCCCCCeeEEEecCCCchHHHHHHHHHc---Ceeee
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQY-CTY---FKKIRPPSPAYAWVKCEREEDKDCYGILKAA---KIIGR 222 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~~~ 222 (259)
+..+.++..++.+.+.+.|++++.+.....+... ... .+......|..+++.++.. .+....++++. ++.+.
T Consensus 310 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~-~~~~~~~l~~l~~~~i~~s 388 (445)
T 1qgn_A 310 LHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD-LLTTAKFVDALKIPYIAPS 388 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-HHHHHHHHHHCSSSEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-HHHHHHHHHhCCCceEecc
Confidence 5556677788889999999987653211111100 000 0000012455677788652 23344444443 67777
Q ss_pred cCCccc----------------------CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 223 EGKKFR----------------------AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 223 ~g~~f~----------------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.|..+. ..++.+|+|++. ++++++++.|++.+++
T Consensus 389 ~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 389 FGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp CCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred CCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 776431 235799999984 6788888888887753
No 135
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.88 E-value=4e-22 Score=172.47 Aligned_cols=206 Identities=10% Similarity=0.086 Sum_probs=146.1
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~ 87 (259)
.|+++|++.+++++++++++.++||||.+. .++|+++|+++|+||+| |........ +.... ++
T Consensus 173 ~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d-~~- 250 (395)
T 1vef_A 173 NDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD-IL- 250 (395)
T ss_dssp TCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS-EE-
T ss_pred CcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCC-EE-
Confidence 578899999988888877666678999753 28899999999999999 321111111 22222 22
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
||||.++. |+|+||++++ +++++.+.......+.+++++.|.++..+++...+ ....++++++++.+.+.
T Consensus 251 -s~sK~~~~-g~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~-------~~~~~~~~~~~~~l~~~ 320 (395)
T 1vef_A 251 -TLAKALGG-GVPLGVAVMR-EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER-------TRLWERAAELGPWFMEK 320 (395)
T ss_dssp -EECGGGGT-TSSCEEEEEE-HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-------HTTHHHHHHHHHHHHHH
T ss_pred -EEcccccC-CCceEEEEeh-HHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh-------CCHHHHHHHHHHHHHHH
Confidence 89999985 9999999999 58887765532334567889999888888874311 23467788888888888
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhH
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDF 245 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~ 245 (259)
|++++. . .+.. .+..|.++|++++....++...+++++||.++|+ +.+++||+++ .+++++
T Consensus 321 l~~~~~-~----------~~~~-~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~-----~~~~iRi~~~~~~~~~~i 383 (395)
T 1vef_A 321 LRAIPS-P----------KIRE-VRGMGLMVGLELKEKAAPYIARLEKEHRVLALQA-----GPTVIRFLPPLVIEKEDL 383 (395)
T ss_dssp HHTSCC-T----------TEEE-EEEETTEEEEEESSCSHHHHHHHHHHHCEECEES-----STTEEEECCCTTCCHHHH
T ss_pred HHHhhc-C----------ceEE-EEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecC-----CCCEEEEeCCCCCCHHHH
Confidence 886542 0 0111 2234678888887533455555553789999985 3589999875 389999
Q ss_pred HHHHHHHHHHhh
Q 024997 246 DLLLHRLDELIS 257 (259)
Q Consensus 246 ~~~~~~l~~~l~ 257 (259)
++++++|+++++
T Consensus 384 ~~~~~~l~~~l~ 395 (395)
T 1vef_A 384 ERVVEAVRAVLA 395 (395)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998763
No 136
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.88 E-value=1.3e-21 Score=167.99 Aligned_cols=215 Identities=10% Similarity=0.032 Sum_probs=144.7
Q ss_pred ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-cCCCCCCCC-CCCCCeEEEecccc
Q 024997 20 KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-FWPHFAPIP-APADEELMIFTISK 92 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-~~~~~~~~~-~~~~~~i~~~S~SK 92 (259)
.+.+|+++|++.++++++++++++|+||||.++ .++|+++|+++|+|++| +.. ..+. ...+.++++.|+||
T Consensus 129 ~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~--~~~~~~~~~~d~~~~s~~K 206 (376)
T 3f0h_A 129 GKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLA--DPFNMNECGADVMITGSQK 206 (376)
T ss_dssp TCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTT--SCCCHHHHTCSEEEEETTT
T ss_pred CCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccC--ccccccccCccEEEecCcc
Confidence 367899999998888999999999999999998 38999999999999988 211 1111 12235799999999
Q ss_pred ccC-CCcceEEEEEecCHHHHHHHHHhhh-----------------hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 024997 93 LTG-HAGSRFGWAVIKDEAVYQRMSAYIS-----------------LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGY 154 (259)
Q Consensus 93 ~~g-~~G~R~G~i~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 154 (259)
.++ .+| +|+++++ +++++.+..... .....++...+.++.++++... ....+++.+
T Consensus 207 ~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---~~~~~~~~~ 280 (376)
T 3f0h_A 207 VLACPPG--ISVIVLA-PRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIK---KHGGADAEV 280 (376)
T ss_dssp TTCCCSS--CEEEEEC-HHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHH---HTTHHHHHH
T ss_pred cccCCCc--eEEEEEC-HHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHH---HhcCHHHHH
Confidence 997 677 6788888 699888764211 0122334433344444554321 111466778
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC--CCeeEEEecCCCch-HHHHHHHHHcCeeeecCCcccCCC
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP--SPAYAWVKCEREED-KDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
++++++++.+.+.|++++ +....+. ..++.+ .....+. ++...+++++||.+++|.... .+
T Consensus 281 ~~~~~~~~~l~~~L~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~gi~v~~g~~~~-~~ 344 (376)
T 3f0h_A 281 ARIASQAADFRAKIKDLP--------------FELVSESPANGVTSV-HPTTANAYDIFLKLKDEYGIWICPNGGEM-KD 344 (376)
T ss_dssp HHHHHHHHHHHHHTTTSS--------------EEECCSSBBTTEEEE-EESSSCHHHHHHHHHHHSSEECEECCGGG-TT
T ss_pred HHHHHHHHHHHHHHHHcC--------------CccCccccCceEEEE-eCCCCCHHHHHHHHHHhCCEEEecCcccc-CC
Confidence 888888888888887653 2222221 222222 2233334 445555544499999984322 45
Q ss_pred CeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+++|+++.. +++++++++++|++++++
T Consensus 345 ~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 345 TIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp TCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 899999963 899999999999999875
No 137
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.88 E-value=2e-21 Score=168.63 Aligned_cols=242 Identities=14% Similarity=0.121 Sum_probs=159.2
Q ss_pred CCCcccchhhh----hhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQEQT----DYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~~~----~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+...+ ...|.++..+. .|+++|++.++++++++++++|+||||.++ .++|+++|+++|+|++|.
T Consensus 111 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~ 190 (398)
T 1gc0_A 111 NTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYC 190 (398)
T ss_dssp SSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTT
T ss_pred CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCc
Confidence 47787776655 44555543332 377889999988999999999999999987 389999999999999992
Q ss_pred CCC-CCCCCCCCCCeEEEeccccccCCCcceE-EEEEecCHHHHH-HHHHhhhh-hcCCCCHHHHHHHHHHHHHHHhcCC
Q 024997 71 WPH-FAPIPAPADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQ-RMSAYISL-NTMGVSRECQLRAFKLLKVVLEDGG 146 (259)
Q Consensus 71 ~~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~-~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~ 146 (259)
... ..++ ..+.++++.|+||.++.+|.|+ ||++++ +++++ .+...... .+...+++.++++.+.++
T Consensus 191 ~~~~~~~~--~~~~d~~~~S~sK~~~~~~~~~~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------- 260 (398)
T 1gc0_A 191 TPYLQRPL--ELGADLVVHSATKYLSGHGDITAGIVVGS-QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIK------- 260 (398)
T ss_dssp HHHHCCGG--GGTCSEEEEETTTTTTCSSSCCCEEEEEC-HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHT-------
T ss_pred ccccCCch--hhCceEEEECCccccCCCCCCeEEEEEEC-hHHHHHHHHHHhhccCCCCCCHHHHHHHHhccc-------
Confidence 000 0111 2346899999999999999998 999998 57665 56555544 455678887777766665
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc-cccceeeCC---CCCeeEEEecCCCchHHHHHHHHHcCeeee
Q 024997 147 NNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQY-CTYFKKIRP---PSPAYAWVKCEREEDKDCYGILKAAKIIGR 222 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~ 222 (259)
.+..+.++..++...+.+.|++++.+.....+... ...+....+ ..+.++.+.++. +.+....++++.++.++
T Consensus 261 --~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~~~i~~~ 337 (398)
T 1gc0_A 261 --TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG-GIGAGRRFMNALQLFSR 337 (398)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-HHHHHHHHHHHCSSSEE
T ss_pred --hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-CHHHHHHHHHhCCCcee
Confidence 34556778888999999999886543211111100 001111221 234455556654 24567788888898876
Q ss_pred c---CCc----------------------ccCCCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 223 E---GKK----------------------FRAEARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 223 ~---g~~----------------------f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
. |.. .+.+++.+|+|++. ++++++.+.+.|+++
T Consensus 338 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 338 AVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp CSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 5 321 01125899999987 445566666666543
No 138
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.87 E-value=1.4e-21 Score=170.83 Aligned_cols=209 Identities=11% Similarity=0.073 Sum_probs=146.7
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhh-H--------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQM-N--------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~-~--------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~ 87 (259)
.|+++|++.+++++++|++++++||+|.+ + .++|+++|+++|+||+| |......+. +....++
T Consensus 189 ~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii-- 266 (420)
T 2pb2_A 189 NDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL-- 266 (420)
T ss_dssp TCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--
T ss_pred CCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--
Confidence 37889999998889998888888888852 2 38999999999999999 322111111 2222232
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKI 167 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (259)
||||.++ +|+|+||++++ +++++.+.......+++.+++.|.++.+.++.. .+ ++..++++++++.+.+.
T Consensus 267 -t~sK~l~-~G~~iG~~~~~-~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~----~~---~~~~~~~~~~~~~l~~~ 336 (420)
T 2pb2_A 267 -TSAKALG-GGFPVSAMLTT-QEIASAFHVGSHGSTYGGNPLACAVAGAAFDII----NT---PEVLQGIHTKRQQFVQH 336 (420)
T ss_dssp -EECGGGG-TTSCCEEEEEC-HHHHTTCC----CCEECCCHHHHHHHHHHHHHH----SS---HHHHHHHHHHHHHHHHH
T ss_pred -Eeccccc-CCCceEEEEEh-HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHH----Hh---ccHHHHHHHHHHHHHHH
Confidence 7899999 89999999999 688877765434456788999999999888853 11 34577888888888888
Q ss_pred HHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cCh
Q 024997 168 ISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQ 242 (259)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~ 242 (259)
|+++.. .++ .+....+. |.+++++++.. +.+.+.+.|.++||.++|+. ++++||++. .++
T Consensus 337 L~~~~~----~~~-----~~~~~~~~-g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~-----~~~iRl~~~~~~t~ 401 (420)
T 2pb2_A 337 LQAIDE----QFD-----IFSDIRGM-GLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG-----ADVMRFAPSLVVEE 401 (420)
T ss_dssp HHHHHH----HHC-----CEEEEEEE-TTEEEEEECGGGTTCHHHHHHHHHHTTEECEESS-----TTEEEECCCTTCCH
T ss_pred HHHHHh----cCC-----CeEEEEec-ceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC-----CCEEEEECCCCCCH
Confidence 876420 011 02223333 56677887643 23444455556899999863 579999964 499
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
+++++++++|++++++
T Consensus 402 eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 402 ADIHEGMQRFAQAVGK 417 (420)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 139
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.87 E-value=1.1e-21 Score=167.36 Aligned_cols=211 Identities=9% Similarity=-0.055 Sum_probs=146.3
Q ss_pred ccccChhhhcccCCCCceEEEEcCCCCCC-hhhH--------HHhhcCCCcEEEeecccc-CC---CCCCCCC-CCCCeE
Q 024997 20 KFEGEANLWGNASSDTHLVEFVTAPNNPD-GQMN--------KAVLKGPYAKSIYDHAYF-WP---HFAPIPA-PADEEL 85 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~~~~~i~i~~p~NPt-G~~~--------~~la~~~~~~vi~De~y~-~~---~~~~~~~-~~~~~i 85 (259)
.+.+|+++|++. .++++++++++||||+ |.++ .++|+++|+++|+|++|. .. ....... .....+
T Consensus 123 ~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~ 201 (359)
T 3pj0_A 123 NQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDS 201 (359)
T ss_dssp TSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSE
T ss_pred CCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCE
Confidence 357789999988 7789999999999998 5765 378999999999999882 10 0111100 122345
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCC--CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMG--VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
++.|+||.++.++ . ||++.+ +++++.+.......... ...+.+.++...++. .. +..+++.++++.
T Consensus 202 ~~~s~sK~~~~~~-g-g~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--------~~-~~~~~~~~~~~~ 269 (359)
T 3pj0_A 202 VYVSFYKGIGGIA-G-AILAGN-DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEK--------RI-GKMAEYFEAAKG 269 (359)
T ss_dssp EEEESSSTTCCSS-C-EEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--------HG-GGHHHHHHHHHH
T ss_pred EEEeccccCCCcc-e-EEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH--------HH-HHhHHHHHHHHH
Confidence 6679999887553 2 888888 79999988765433222 233334444444542 12 234457788888
Q ss_pred HHHHHHhcCCCccccccccccccceee-CCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccC-CCCeEEEEe
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKI-RPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRA-EARFVRLSL 238 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~ 238 (259)
+.+.|+++++ +... .+..+.++|++++.. +.+.+.+.|.++||.++||..|+. +.+++|+++
T Consensus 270 l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i 336 (359)
T 3pj0_A 270 LAERFNSCSG-------------VKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSV 336 (359)
T ss_dssp HHHHHHTSTT-------------EEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEEC
T ss_pred HHHHHhhCCC-------------ceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEe
Confidence 9999987654 4443 456778888888653 245666777789999999987774 457899998
Q ss_pred e-----cChhhHHHHHHHHHHHh
Q 024997 239 L-----KSQDDFDLLLHRLDELI 256 (259)
Q Consensus 239 ~-----~~~~~~~~~~~~l~~~l 256 (259)
+ .+.+++++++++|.+.+
T Consensus 337 ~~~~~~~~~e~l~~~l~~l~~~l 359 (359)
T 3pj0_A 337 GDAFAEIPAKNLELVFRCLEKEL 359 (359)
T ss_dssp CTTGGGSCHHHHHHHHHHHHHHC
T ss_pred cCccccCCHHHHHHHHHHHHhcC
Confidence 5 27889999999998753
No 140
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.87 E-value=9.6e-22 Score=172.54 Aligned_cols=209 Identities=10% Similarity=0.026 Sum_probs=140.4
Q ss_pred ChhhhcccC----CCCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCC--CCCC--CCCCCe
Q 024997 24 EANLWGNAS----SDTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHF--APIP--APADEE 84 (259)
Q Consensus 24 d~~~l~~~~----~~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~--~~~~--~~~~~~ 84 (259)
|+++|++.+ .++++++++++++|++|.+. .++|+++|+++|+||+| |.... .... +....
T Consensus 186 d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~d- 264 (439)
T 3dxv_A 186 ILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPD- 264 (439)
T ss_dssp HHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCS-
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCC-
Confidence 578888887 45678877777788888874 28899999999999999 42211 1111 22222
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+.||||.++ +|+|+||++++ +++++.+.......++ .+++.|.++.++++... .++ ..++++++.+.+
T Consensus 265 --i~s~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~---~~~----~~~~~~~~~~~~ 332 (439)
T 3dxv_A 265 --ILVLGKGLG-GGLPLSAVIAP-AEILDCASAFAMQTLH-GNPISAAAGLAVLETID---RDD----LPAMAERKGRLL 332 (439)
T ss_dssp --EEEECGGGG-TTSCCEEEEEE-HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHH---HTT----HHHHHHHHHHHH
T ss_pred --EEEEcchhc-CCcceEEEEEC-HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHH---hcC----HHHHHHHHHHHH
Confidence 239999999 69999999999 7999888765545566 89999999888887531 122 355566666666
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC--------CC-chHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE--------RE-EDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
.+.|+++.. .++ .+...++ .|.++++.+. .. ....+.+.+.++||.++|+.. .++++|
T Consensus 333 ~~~l~~~~~----~~~-----~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iR 399 (439)
T 3dxv_A 333 RDGLSELAK----RHP-----LIGDIRG-RGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM---NGNVLE 399 (439)
T ss_dssp HHHHHHHHH----HCT-----TEEEEEE-ETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST---TSCEEE
T ss_pred HHHHHHHHH----hCC-----CeEEEEE-EEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC---CCCEEE
Confidence 666654320 000 0222333 3556666652 11 123334444467999999743 248999
Q ss_pred EEee--cChhhHHHHHHHHHHHhhh
Q 024997 236 LSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 236 is~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
|+++ .+++++++++++|++++++
T Consensus 400 i~~~~~~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 400 FTPPLTITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9864 3899999999999998763
No 141
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.86 E-value=6.8e-22 Score=174.35 Aligned_cols=211 Identities=14% Similarity=0.033 Sum_probs=139.6
Q ss_pred hhhcccCCCCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEecccc
Q 024997 26 NLWGNASSDTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISK 92 (259)
Q Consensus 26 ~~l~~~~~~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK 92 (259)
+.|++.+.+++.++++++|+||+|.+. .++|+++|+++|+||+| |+....... ...+....+.||||
T Consensus 215 ~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK 294 (453)
T 4ffc_A 215 SRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAK 294 (453)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECG
T ss_pred HHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhh
Confidence 556666666666668889998887443 38999999999999999 322111111 11122223568999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 93 LTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 93 ~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
.++. |+|+||++++ +++++.+.......+++.+++.|+++.++++... .+++ .++++++.+++.+.|+++.
T Consensus 295 ~~~~-G~~~G~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~~~~----~~~~~~~~~~l~~~l~~~~ 365 (453)
T 4ffc_A 295 GIAG-GMPLSAVTGR-AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMR---ELDL----PARARAIEASVTSRLSALA 365 (453)
T ss_dssp GGGT-TSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHH---HTTH----HHHHHHHHHHHHHHHHHHH
T ss_pred hhcC-CcCeEEEEEC-HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhh---hhhH----HHHHHHHHHHHHHHHHHHH
Confidence 9984 9999999999 7999988776666788999999999999988531 1233 4444555555555554321
Q ss_pred CCccccccccccccceeeCCCCCeeEEEecCC-----C---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--Ch
Q 024997 173 RFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-----E---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQ 242 (259)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~ 242 (259)
..++ .+....+ .|.++|+.+.. . ....+...+.++||.++|+..|+ +++|+++.. ++
T Consensus 366 ----~~~~-----~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~---~~iRi~~~~~~t~ 432 (453)
T 4ffc_A 366 ----EEVD-----IIGEVRG-RGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFG---NVIRLLPPLVIGD 432 (453)
T ss_dssp ----HHCS-----SEEEEEE-ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTS---CEEEECCCTTCCH
T ss_pred ----hhCC-----CeEEEEe-eceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCC---CEEEEECCCCCCH
Confidence 0000 0222233 35667776632 1 12334445557899999975543 689998653 89
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
+++++++++|++++++
T Consensus 433 e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 433 DLLDEGITALSDIIRA 448 (453)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 142
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=2.2e-21 Score=165.99 Aligned_cols=204 Identities=13% Similarity=0.050 Sum_probs=144.7
Q ss_pred CCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeecccc-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHH
Q 024997 32 SSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAYF-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEA 110 (259)
Q Consensus 32 ~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~ 110 (259)
++++++++++++|+||||.+++.+.+-+|+++|+|++|. +.....+ .+..+++.|+||.+|++| +||++++ ++
T Consensus 139 i~~~t~~v~~~~~~n~tG~~~~~l~~i~~~~vivD~a~~~~~~~~~~---~~~d~~~~s~~K~~g~~G--~G~l~~~-~~ 212 (362)
T 2c0r_A 139 LQDNAAYLHLTSNETIEGAQFKAFPDTGSVPLIGDMSSDILSRPFDL---NQFGLVYAGAQKNLGPSG--VTVVIVR-ED 212 (362)
T ss_dssp CCTTEEEEEEESEETTTTEECSSCCCCTTSCEEEECTTTTTSSCCCG---GGCSEEEEETTTTTCCSS--CEEEEEE-GG
T ss_pred cCCCcCEEEEeCCcCccceecccccccCCCEEEEEChhhccCCccch---hHCcEEEEeccccccCcC--cEEEEEc-HH
Confidence 677899999999999999975444444899999999993 2111112 122688899999999889 9999999 58
Q ss_pred HHHHHHHh------------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcc-hHHHHHHHHHHHHHHHHHHHHhcCCC-cc
Q 024997 111 VYQRMSAY------------ISLNTMGVSRECQLRAFKLLKVVLEDGGNN-IFEFGYNTMKKRWENLSKIISLSNRF-SL 176 (259)
Q Consensus 111 ~~~~~~~~------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 176 (259)
+++.+... .......++.+.|.++..+++.. .+. .+++.+++++++++.+.+.|++++++ .+
T Consensus 213 ~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 288 (362)
T 2c0r_A 213 LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWI----EERGGLEGVQQANRKKASLIYDAIDQSGGFYRG 288 (362)
T ss_dssp GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHH----HHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEE
T ss_pred HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 77655431 11223467778888888888742 111 56788899999999999999876521 11
Q ss_pred ccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHH
Q 024997 177 QEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLD 253 (259)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~ 253 (259)
. .+ ....++.++++.++.. +.+.+.+.|+++||.+++|..+ .+++|+|++. +.++++.+++.|+
T Consensus 289 ~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~---~~~iRis~~~~~~~e~i~~l~~~l~ 355 (362)
T 2c0r_A 289 C--VD--------VDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRS---VGGLRASIYNAVPYESCEALVQFME 355 (362)
T ss_dssp S--SC--------GGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTT---TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred C--CC--------hHHcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCC---CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 0 00 0122455678877642 3445555677889999988766 3679999975 7899999999999
Q ss_pred HHhhh
Q 024997 254 ELISK 258 (259)
Q Consensus 254 ~~l~~ 258 (259)
+++++
T Consensus 356 ~~~~~ 360 (362)
T 2c0r_A 356 HFKRS 360 (362)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88753
No 143
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.3e-20 Score=164.21 Aligned_cols=216 Identities=12% Similarity=0.033 Sum_probs=150.3
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhHH---HhhcCCCcEEEeecccc-----CCCCCCCCCCCCCeEEEeccc
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK---AVLKGPYAKSIYDHAYF-----WPHFAPIPAPADEELMIFTIS 91 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~---~la~~~~~~vi~De~y~-----~~~~~~~~~~~~~~i~~~S~S 91 (259)
+.+|+++|++.+. +++++|++++|+||+..-+. ++|+++|+++|+||+|+ ....... .....++++|+|
T Consensus 157 ~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~--~~~~di~~~s~s 234 (425)
T 3ecd_A 157 MLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP--VEHAHVVTSTTH 234 (425)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG--GGTCSEEEEESS
T ss_pred CccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCc--hhcCcEEEecCC
Confidence 6788999999885 57899999999998766663 88999999999999962 2211111 112358899999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhhhhhcC-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 92 KLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM-GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
|.+ +|.|.||++++++++.+.+......... +++...+.++..++... ....+.+.+++++++++.+.+.|++
T Consensus 235 K~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~l~~~L~~ 308 (425)
T 3ecd_A 235 KTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEA----LTDDFKTYIDRVLANAQALGDVLKA 308 (425)
T ss_dssp GGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHH----TSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 998 5788999999865777777665443222 34444444444444431 3345677888899999999999987
Q ss_pred cCCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHHHHHHHHcCeeee----cCCcccC-CCCeEEEEeec--
Q 024997 171 SNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDCYGILKAAKIIGR----EGKKFRA-EARFVRLSLLK-- 240 (259)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~----~g~~f~~-~~~~~Ris~~~-- 240 (259)
.+ +.... +.++.++|+.+... +.+.+.+.|+++||.++ ||..+.. ..+.+|+++..
T Consensus 309 ~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~ 374 (425)
T 3ecd_A 309 GG--------------VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGT 374 (425)
T ss_dssp TT--------------CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHH
T ss_pred CC--------------CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhhe
Confidence 43 23333 24677888887642 46777888888999999 4433222 24689999532
Q ss_pred ----ChhhHHHHHHHHHHHhhh
Q 024997 241 ----SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ----~~~~~~~~~~~l~~~l~~ 258 (259)
++++++++++.|++++++
T Consensus 375 ~~~~~~e~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 375 TRGFGAAEFREVGRLILEVFEA 396 (425)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHHHHHHHHhc
Confidence 378999999999888753
No 144
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.86 E-value=2e-20 Score=162.07 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=144.2
Q ss_pred CCCCceEEEEcCCCCCChhhHH--HhhcCCCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCH
Q 024997 32 SSDTHLVEFVTAPNNPDGQMNK--AVLKGPYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDE 109 (259)
Q Consensus 32 ~~~~~~~i~i~~p~NPtG~~~~--~la~~~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~ 109 (259)
+++++++|++++|+||||.+++ ++++.+|+++|+|++|.... ..+ +..+.+++++|+||.+|.+| ++||++++ +
T Consensus 162 i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~vivD~a~~~~~-~~~-~~~~~di~~~s~sK~~~~~g-g~g~l~~~-~ 237 (398)
T 2fyf_A 162 TDPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGAGG-LPV-DIAETDAYYFAPQKNFASDG-GLWLAIMS-P 237 (398)
T ss_dssp CCTTCSEEEEESEETTTTEECCCCCCTTCC-CEEEEECTTTTTT-SCC-CGGGCSEEEECTTSTTCSCS-SEEEEEEC-H
T ss_pred ccCCCCEEEEeCcCCCcceecchHHhhhhcCCeEEEEeccccCC-ccc-CcccCcEEEEecCcccCCCC-ceEEEEEC-H
Confidence 5678899999999999999985 56666999999999993111 111 11235689999999999775 59999999 6
Q ss_pred HHHHHHHHhh---------------------hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 110 AVYQRMSAYI---------------------SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 110 ~~~~~~~~~~---------------------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
++++.++... ......++...+.++..+++...+ ...+++.+++++++++.+.+.|
T Consensus 238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~---~g~~~~~~~~~~~~~~~l~~~L 314 (398)
T 2fyf_A 238 AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVG---NGGLDWAVKRTADSSQRLYSWA 314 (398)
T ss_dssp HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH---HTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHH
Confidence 8888775421 011234556666667667764211 1126778889999999999999
Q ss_pred HhcCCCccccccccccccceeeC--C--CCCeeEEEecCC-CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--C
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIR--P--PSPAYAWVKCER-EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--S 241 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~-~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~ 241 (259)
+++++ +.... + .+++++|++++. .+.+.+.+.|.++||.+++|... .+.+++|||++. +
T Consensus 315 ~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~-~~~~~iRis~~~~~t 380 (398)
T 2fyf_A 315 QERPY-------------TTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRK-LGRNQLRVAMFPAVE 380 (398)
T ss_dssp HHSTT-------------EEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCTT-TCSSEEEEECCTTSC
T ss_pred HHcCC-------------ceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCccc-CCCCEEEEEecCCCC
Confidence 88753 22221 2 345588888853 34445555555679999987322 235899999974 8
Q ss_pred hhhHHHHHHHHHHHhhh
Q 024997 242 QDDFDLLLHRLDELISK 258 (259)
Q Consensus 242 ~~~~~~~~~~l~~~l~~ 258 (259)
++++++++++|++++++
T Consensus 381 ~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 381 PDDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 145
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.86 E-value=2.8e-21 Score=167.49 Aligned_cols=234 Identities=9% Similarity=0.056 Sum_probs=148.3
Q ss_pred hhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCC----CcEEEeeccccCCCCCCCCC
Q 024997 10 QTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGP----YAKSIYDHAYFWPHFAPIPA 79 (259)
Q Consensus 10 ~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~----~~~vi~De~y~~~~~~~~~~ 79 (259)
.++..|.++..+.. | ++|++.+++++++|++++||||||.++ .++|+++ |+++|+|++|-....... .
T Consensus 113 ~~~~~G~~v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~-~ 190 (393)
T 1n8p_A 113 VANAHGVETSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNP-L 190 (393)
T ss_dssp TSTTTCSCCEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCG-G
T ss_pred HHHHcCcEEEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCH-H
Confidence 33445665543333 5 788888888899999999999999998 3889999 999999999920000011 1
Q ss_pred CCCCeEEEeccccccCCCcceE-EEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 024997 80 PADEELMIFTISKLTGHAGSRF-GWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK 158 (259)
Q Consensus 80 ~~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (259)
..+.+++++|+||.+|.+|+|+ ||+++.++++++.+.......+...++..+.++...++ .+....++..
T Consensus 191 ~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~---------~~~~~~~~~~ 261 (393)
T 1n8p_A 191 NFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLK---------TLHLRVRQAA 261 (393)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---------THHHHHHHHH
T ss_pred HcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc---------hHHHHHHHHH
Confidence 1247899999999999999999 99998436899988877665555566766665555554 3455677778
Q ss_pred HHHHHHHHHHHhcCC-Cccccccccc-ccc---ceeeCCC-C-CeeEEEecCCCchHHHHHHHHH---cCeeeecCC---
Q 024997 159 KRWENLSKIISLSNR-FSLQEIAPQY-CTY---FKKIRPP-S-PAYAWVKCEREEDKDCYGILKA---AKIIGREGK--- 225 (259)
Q Consensus 159 ~~~~~~~~~l~~~~~-~~~~~~~~~~-~~~---~~~~~~~-~-~~~~~~~~~~~~~~~~~~ll~~---~gi~~~~g~--- 225 (259)
++...+.+.|++.+. +.....+... ... +...... . +..+++.++.. ......+++. .++.+..|.
T Consensus 262 ~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~l~~l~~~~~~~s~G~~~s 340 (393)
T 1n8p_A 262 LSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG-AEAASKFASSTRLFTLAESLGGIES 340 (393)
T ss_dssp HHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC-HHHHHHHHHHCSSSEECSCCCCSSC
T ss_pred HHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc-HHHHHHHHhhCCcceECCCCCCCcc
Confidence 888888888887643 2111111100 000 0000011 2 55678888653 2334444443 344554442
Q ss_pred -------cc------------cCCCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 226 -------KF------------RAEARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 226 -------~f------------~~~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
.+ +.+.+.+|+|++. ++++++.+.+.|+++
T Consensus 341 ~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 341 LLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp EEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 11 1125789999987 455567777776654
No 146
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.86 E-value=2.3e-21 Score=170.81 Aligned_cols=214 Identities=14% Similarity=0.086 Sum_probs=141.5
Q ss_pred hhhhcccCC----CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEE
Q 024997 25 ANLWGNASS----DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMI 87 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~ 87 (259)
+++|++.+. +++++++++.+ +| ||.++ .++|+++|+++|+||+| |+....... ...+....+
T Consensus 201 ~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di 279 (452)
T 3n5m_A 201 VKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDI 279 (452)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCE
Confidence 677888775 46777677666 89 99765 28899999999999999 422111111 111212224
Q ss_pred eccccccCCCc-ceEEEEEecCHHHHHHHHH------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 88 FTISKLTGHAG-SRFGWAVIKDEAVYQRMSA------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 88 ~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
.||||.++. | +|+||++++ +++++.+.. .....+++.+++.|+++.++++... .++ ..++++++
T Consensus 280 ~t~sK~l~~-G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~~~----~~~~~~~~ 350 (452)
T 3n5m_A 280 ITMAKGITS-AYLPLSATAVK-REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIE---NEN----LIERSAQM 350 (452)
T ss_dssp EEECGGGGT-TSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHH---HTT----HHHHHHHH
T ss_pred EeecccccC-CCcceEEEEEC-HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHH---hcc----HHHHHHHH
Confidence 579999984 9 999999999 799988843 1234567889999999999888531 122 35556666
Q ss_pred HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c---------hHHHHHHHHHcCeeeecCCcccC-
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E---------DKDCYGILKAAKIIGREGKKFRA- 229 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~ll~~~gi~~~~g~~f~~- 229 (259)
.+.+.+.|+++.. .++ .+....+. |.++++.+... . ...+.+.+.++||.++|+..|..
T Consensus 351 ~~~l~~~L~~~~~----~~~-----~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ 420 (452)
T 3n5m_A 351 GSLLLEQLKEEIG----EHP-----LVGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAG 420 (452)
T ss_dssp HHHHHHHHHHHHT----TCT-----TEEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTT
T ss_pred HHHHHHHHHHHHh----cCC-----CeEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCC
Confidence 6666666655310 000 12333444 44555555221 0 12344455578999999887654
Q ss_pred CCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
.++++||+++ .+++++++++++|++++++
T Consensus 421 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 421 YNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 3689999754 4999999999999998864
No 147
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.86 E-value=1e-21 Score=172.08 Aligned_cols=214 Identities=16% Similarity=0.046 Sum_probs=142.8
Q ss_pred ChhhhcccCC----CCceEEEEcCCC-CCChhh-H--------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEE
Q 024997 24 EANLWGNASS----DTHLVEFVTAPN-NPDGQM-N--------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELM 86 (259)
Q Consensus 24 d~~~l~~~~~----~~~~~i~i~~p~-NPtG~~-~--------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~ 86 (259)
|++.|++.++ +++++ ++++|+ ||||.+ + .++|+++|+++|+||+| |+....... +..+....
T Consensus 188 d~~~le~~l~~~~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d 266 (433)
T 1zod_A 188 ELDYAFDLIDRQSSGNLAA-FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD 266 (433)
T ss_dssp HHHHHHHHHHHHCCSCEEE-EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred HHHHHHHHHHhcCCCCeEE-EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC
Confidence 5778888774 45566 666775 889964 3 28899999999999999 421111111 10011112
Q ss_pred EeccccccCCCcceEEEEEecCHHHHHHHHHhhhh--hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISL--NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+.|+||.++ .|+|+||++++ +++++.+...... .+.+.+++.|.++.++++...+ ++ ..++++++++.+
T Consensus 267 i~s~sK~~~-~G~~ig~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~----~~~~~~~~~~~l 337 (433)
T 1zod_A 267 ILTLSKTLG-AGLPLAAIVTS-AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DG----LVARANVMGDRL 337 (433)
T ss_dssp EEEECHHHH-TTSSCEEEEEC-HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TT----HHHHHHHHHHHH
T ss_pred EEEeccccc-CCCCeeEEEEh-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CC----HHHHHHHHHHHH
Confidence 459999999 49999999999 6999988763222 5677899999998888875321 12 356677777777
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chHHHHHHHHHcCeeeecCCcccCCCCeEE
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDKDCYGILKAAKIIGREGKKFRAEARFVR 235 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~R 235 (259)
.+.|+++.. .++ .+...++. |.++|+++... ....+.+.|.++||.+.||..|+ .++++|
T Consensus 338 ~~~l~~l~~----~~~-----~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~-~~~~lR 406 (433)
T 1zod_A 338 RRGLLDLME----RFD-----CIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPG-MGGVFR 406 (433)
T ss_dssp HHHHHHHHH----HCT-----TEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTT-SCCEEE
T ss_pred HHHHHHHHH----hCC-----CeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCC-CCCEEE
Confidence 777765420 000 02223333 56667776531 13334444447899999988775 358999
Q ss_pred EEee--cChhhHHHHHHHHHHHhhh
Q 024997 236 LSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 236 is~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
|+++ .+++++++++++|++++++
T Consensus 407 i~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 407 IAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCcCCCHHHHHHHHHHHHHHHHH
Confidence 9764 4899999999999998753
No 148
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.86 E-value=2.8e-21 Score=168.10 Aligned_cols=216 Identities=12% Similarity=0.031 Sum_probs=152.1
Q ss_pred cCcccccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEe
Q 024997 15 ESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIF 88 (259)
Q Consensus 15 g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~ 88 (259)
|.++..+.. +++|++.++++++++++++|+||||.++ .++|+++|+++|+|++| ++.....+ ...+.++++.
T Consensus 146 g~~~~~v~~-~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~~~~d~~~~ 223 (416)
T 1qz9_A 146 GYTLRLVDS-PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDL-HQAGADYAIG 223 (416)
T ss_dssp SCEEEEESS-GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCH-HHHTCSEEEE
T ss_pred CceEEEeCc-HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCCh-hhcCCCEEEe
Confidence 655543333 7889988888899999999999999987 38899999999999999 32111111 1123578999
Q ss_pred ccccccCCCcceE-EEEEecCHHHHHHHHHhh-----------------------hhhcCCCCHHHHHHHHHHHHHHHhc
Q 024997 89 TISKLTGHAGSRF-GWAVIKDEAVYQRMSAYI-----------------------SLNTMGVSRECQLRAFKLLKVVLED 144 (259)
Q Consensus 89 S~SK~~g~~G~R~-G~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~q~~~~~~l~~~~~~ 144 (259)
|+||.++ .|.++ |+++++ +++++.+.... ......++...+.++..+++..
T Consensus 224 s~~K~l~-~g~~~~g~l~~~-~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--- 298 (416)
T 1qz9_A 224 CTYKYLN-GGPGSQAFVWVS-PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVF--- 298 (416)
T ss_dssp CSSSTTC-CCTTCCCEEEEC-TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH---
T ss_pred cCcccCC-CCCCCeEEEEEC-HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHH---
Confidence 9999984 67777 999999 47776654321 1112235666666666777643
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhc-C--CCccccccccccccceeeCCC----CCeeEEEecCCCchHHHHHHHHHc
Q 024997 145 GGNNIFEFGYNTMKKRWENLSKIISLS-N--RFSLQEIAPQYCTYFKKIRPP----SPAYAWVKCEREEDKDCYGILKAA 217 (259)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ll~~~ 217 (259)
....+++.+++++++++.+.+.|+++ + + +....+. .+.++|+.++. .+.+.+.|.++
T Consensus 299 -~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~ 362 (416)
T 1qz9_A 299 -AQTDMASLRRKSLALTDLFIELVEQRCAAHE-------------LTLVTPREHAKRGSHVSFEHPE--GYAVIQALIDR 362 (416)
T ss_dssp -TTSCHHHHHHHHHHHHHHHHHHHHHHHTTSC-------------CEECSCSSGGGBCSEEEEECTT--HHHHHHHHHTT
T ss_pred -HhcCHHHHHHHHHHHHHHHHHHHHhhccCCC-------------eEEeCCCCHHHcCCEEEEecCC--HHHHHHHHHhC
Confidence 22356778889999999999999875 3 2 2222332 24568888864 34455555578
Q ss_pred CeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhhh
Q 024997 218 KIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 218 gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~~ 258 (259)
||.+.. .+.+++||+++. +++++++++++|++++++
T Consensus 363 gi~~~~-----~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 363 GVIGDY-----REPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp TEECEE-----ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcEecc-----CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 998753 235899999973 899999999999998764
No 149
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.85 E-value=1.1e-20 Score=166.59 Aligned_cols=232 Identities=12% Similarity=0.068 Sum_probs=149.6
Q ss_pred CCc-ccchhhhhhccCccc----------------ccccChhhhcccCCCCc----eEEEEcCCCC-CChhhH-------
Q 024997 2 PFY-PLYQEQTDYFESVDY----------------KFEGEANLWGNASSDTH----LVEFVTAPNN-PDGQMN------- 52 (259)
Q Consensus 2 P~y-~~~~~~~~~~g~~~~----------------~~~~d~~~l~~~~~~~~----~~i~i~~p~N-PtG~~~------- 52 (259)
|+| +.|...+...|.++. ++.+|+++|++.+++++ +++++++|+| |||.++
T Consensus 120 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~ 199 (456)
T 2ez2_A 120 NMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRA 199 (456)
T ss_dssp SSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred ccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHH
Confidence 677 777777777776541 25678899998885443 8889999999 999876
Q ss_pred -HHhhcCCCcEEEeeccc-cC---------CCCCCCC--------CCCCCeEEEeccccccCCCcceEEEEEecCHHHHH
Q 024997 53 -KAVLKGPYAKSIYDHAY-FW---------PHFAPIP--------APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQ 113 (259)
Q Consensus 53 -~~la~~~~~~vi~De~y-~~---------~~~~~~~--------~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~ 113 (259)
.++|+++|+++|+||+| ++ ....... .....++++ |++|.++ +| |.||++++++++++
T Consensus 200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~ 276 (456)
T 2ez2_A 200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFS 276 (456)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHH
T ss_pred HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCcccCC-CC-ceeEEEECCHHHHH
Confidence 28899999999999998 31 1111110 112234444 7888865 67 78999984378988
Q ss_pred HHHHhhhhh-----cCCCCHHHHHH-HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccc
Q 024997 114 RMSAYISLN-----TMGVSRECQLR-AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYF 187 (259)
Q Consensus 114 ~~~~~~~~~-----~~~~~~~~q~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 187 (259)
.+....... ..+.+.....+ +...++. .+ ++..++.+++.+.+.+.|++.+ +
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~-----~~---~~~~~~~~~~~~~l~~~L~~~g--------------~ 334 (456)
T 2ez2_A 277 SAKELVVVYEGMPSYGGLAGRDMEAMAIGLREA-----MQ---YEYIEHRVKQVRYLGDKLKAAG--------------V 334 (456)
T ss_dssp HHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHH-----TC---HHHHHHHHHHHHHHHHHHHHTT--------------C
T ss_pred HHHHHHhhccCcccccCcchhHHHHHHHHHHHH-----hH---HHHHHHHHHHHHHHHHHHhcCC--------------C
Confidence 887654321 12233322222 3333331 11 2334445555666777776532 3
Q ss_pred eeeCCCCCeeEEEecC----CCc-hHH-----HHHHHHHcCeeeec-CCccc-----------CCCCeEEEEee---cCh
Q 024997 188 KKIRPPSPAYAWVKCE----REE-DKD-----CYGILKAAKIIGRE-GKKFR-----------AEARFVRLSLL---KSQ 242 (259)
Q Consensus 188 ~~~~~~~~~~~~~~~~----~~~-~~~-----~~~ll~~~gi~~~~-g~~f~-----------~~~~~~Ris~~---~~~ 242 (259)
....|.+++++|+++. ..+ .++ ...+++++||.+.+ |..|. .+.+++|||++ .++
T Consensus 335 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~ 414 (456)
T 2ez2_A 335 PIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTY 414 (456)
T ss_dssp CBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCH
T ss_pred ccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCH
Confidence 3446778899999863 222 333 44454788999776 54331 12478999997 589
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
+++++++++|++++++
T Consensus 415 e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 415 AHMDVVADGIIKLYQH 430 (456)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988753
No 150
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.85 E-value=5.2e-21 Score=162.54 Aligned_cols=225 Identities=12% Similarity=0.049 Sum_probs=145.4
Q ss_pred CCCccc-ch--hhhhhccCccc-----ccccChhhhcccCCC------CceEEEEcCCCCCC-hhhH--------HHhhc
Q 024997 1 MPFYPL-YQ--EQTDYFESVDY-----KFEGEANLWGNASSD------THLVEFVTAPNNPD-GQMN--------KAVLK 57 (259)
Q Consensus 1 ~P~y~~-~~--~~~~~~g~~~~-----~~~~d~~~l~~~~~~------~~~~i~i~~p~NPt-G~~~--------~~la~ 57 (259)
+|+|+. |. ..++..|.++. .+.+|+++|++.+++ ++++|++++||||| |.++ .++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~ 163 (347)
T 1jg8_A 84 ADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAK 163 (347)
T ss_dssp TTCHHHHSSTTHHHHHTCCEEEEECEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred CcchhhhccccchhhccCeEEEEecCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHH
Confidence 366643 33 14455566542 234688999998864 68999999999999 9875 27889
Q ss_pred CCCcEEEeeccc-cC-----C-CCCCCCCCCCCeEEEeccccccCCCcceEE-EEEecCHHHHHHHHHhhhhhcC--CCC
Q 024997 58 GPYAKSIYDHAY-FW-----P-HFAPIPAPADEELMIFTISKLTGHAGSRFG-WAVIKDEAVYQRMSAYISLNTM--GVS 127 (259)
Q Consensus 58 ~~~~~vi~De~y-~~-----~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G-~i~~~~~~~~~~~~~~~~~~~~--~~~ 127 (259)
++|+++|+|++| |+ + ....+....+ .++.|+||.++.+ +| |++.+ +++++++......... ..+
T Consensus 164 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jg8_A 164 EHGINVHIDGARIFNASIASGVPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGD-RDFIERARKARKMLGGGMRQA 237 (347)
T ss_dssp HHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEEC-HHHHHHHHHHHHHHTCCCSST
T ss_pred HCCCEEEeehhhhhcchhhcCCChHHhccccc--EEEEecccccCCC---ceEEEEcC-HHHHHHHHHHHHHcCCchhHH
Confidence 999999999987 31 1 1111111122 3456899999743 57 56667 7898888766544332 234
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--C
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--E 205 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 205 (259)
...+.++...++. ....+ ++..++++.+.+.|+++ ++.+. ..+..+.++|++++. .
T Consensus 238 ~~~~~~~~~~l~~-----~~~~~----~~~~~~~~~l~~~L~~~-~~~~~------------~~~~~~~~~~~~~~~~~~ 295 (347)
T 1jg8_A 238 GVLAAAGIIALTK-----MVDRL----KEDHENARFLALKLKEI-GYSVN------------PEDVKTNMVILRTDNLKV 295 (347)
T ss_dssp HHHHHHHHHHHHH-----SSTTH----HHHHHHHHHHHHHHHHH-TCBCC------------GGGCCSSEEEEECTTSSS
T ss_pred HHHHHHHHHHHHH-----HHHHH----HHHHHHHHHHHHHHHhc-Cceec------------cCCCcceEEEEEcccccC
Confidence 5566666666663 22222 22345667778888765 32110 123456678998873 3
Q ss_pred chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+.+.|.++||.++++. .+++|+++.. +++++++++++|++++++
T Consensus 296 ~~~~~~~~l~~~gi~v~~~~-----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 296 NAHGFIEALRNSGVLANAVS-----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp CHHHHHHHHHHHTEECEEEE-----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCEEecCC-----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 34444444557899999842 4789999853 899999999999998753
No 151
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=1.6e-20 Score=159.70 Aligned_cols=226 Identities=12% Similarity=0.020 Sum_probs=146.6
Q ss_pred CCcccchhh--hhhc--cCcc-----cccccChhhhcc-cCCC-------CceEEEEcCCCCCChhhH--------HHhh
Q 024997 2 PFYPLYQEQ--TDYF--ESVD-----YKFEGEANLWGN-ASSD-------THLVEFVTAPNNPDGQMN--------KAVL 56 (259)
Q Consensus 2 P~y~~~~~~--~~~~--g~~~-----~~~~~d~~~l~~-~~~~-------~~~~i~i~~p~NPtG~~~--------~~la 56 (259)
|+|+.+... +... |.++ ..+.+|+++|++ .+++ ++++|++++||| ||.++ .++|
T Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~ 169 (356)
T 1v72_A 91 ASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVC 169 (356)
T ss_dssp TSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHH
T ss_pred ccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHH
Confidence 555544433 4444 6554 235678899999 8864 689999999987 99865 2889
Q ss_pred cCCCcEEEeecccc-------CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcC-CC-C
Q 024997 57 KGPYAKSIYDHAYF-------WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM-GV-S 127 (259)
Q Consensus 57 ~~~~~~vi~De~y~-------~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~-~~-~ 127 (259)
+++|+++|+|++|. +.....+.-.....+++.|+||. |. ....||++++ +++++.+......... .. +
T Consensus 170 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~-~~G~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 246 (356)
T 1v72_A 170 KSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV-LAAEAIVLFN-TSLATEMSYRRKRAGHLSSKM 246 (356)
T ss_dssp HHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC-SSCEEEEESS-GGGHHHHHHHHHHTTCCCSST
T ss_pred HHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC-cCccEEEEEC-HHHHhhHHHHhhccCchhhhH
Confidence 99999999999982 11111110001233556699998 43 2223488887 6888887665432221 11 2
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCch
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREED 207 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (259)
...+..+...++ +....+..++++++++.+.+.|+++++ +....+.+++++|++++ .
T Consensus 247 ~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~---~ 303 (356)
T 1v72_A 247 RFLSAQIDAYLT-------DDLWLRNARKANAAAQRLAQGLEGLGG-------------VEVLGGTEANILFCRLD---S 303 (356)
T ss_dssp HHHHHHHHHHTS-------TTHHHHHHHHHHHHHHHHHHHHTTCTT-------------EEEESCCCSSEEEEEEC---H
T ss_pred HHHHHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHhhCCC-------------cEEccCCCccEEEEEcC---H
Confidence 222222222332 123344567778888888888876543 44445678889999875 3
Q ss_pred HHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 208 KDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
++... |.++||.++||. |+ ++++|+++.. +++++++++++|++++++
T Consensus 304 ~~~~~-l~~~gi~v~~g~-~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 304 AMIDA-LLKAGFGFYHDR-WG--PNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp HHHHH-HHHTTCBCBCSS-SS--TTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred HHHHH-HHhcCeEEeccc-cC--CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 44444 457899999987 55 5899999864 889999999999988764
No 152
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.85 E-value=1.3e-20 Score=166.46 Aligned_cols=211 Identities=14% Similarity=0.078 Sum_probs=135.1
Q ss_pred hhhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEe
Q 024997 25 ANLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIF 88 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~ 88 (259)
.++|++.+. +++++|+++.++|++|.+. .++|+++|+++|+||+| |+....... ...+....+.
T Consensus 207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~ 286 (460)
T 3gju_A 207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI 286 (460)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 467777774 4566655555566777643 38999999999999999 422111111 1111111245
Q ss_pred ccccccCCCc-ceEEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 89 TISKLTGHAG-SRFGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 89 S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
||||.++ .| +|+||++++ +++++.+... ....+++.+++.|+++.++++... .++++++.++..+..
T Consensus 287 t~sK~l~-gG~~~lg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~~~~~~~~~~~~~~~ 361 (460)
T 3gju_A 287 TIAKGLT-SAYAPLSGVIVA-DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELID---EMDLVTNAGETGAYF 361 (460)
T ss_dssp EECGGGT-TTSSCCEEEEEE-HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHH
T ss_pred eeehhhc-CCCCCeEEEEEC-HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHH
Confidence 7999997 56 899999999 7999998642 334578899999999999998531 123444444444444
Q ss_pred HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c-----------hHHHHHHHHHcCeeeecCCccc
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E-----------DKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
++.+.+.++.++. +....+. |.++++.+... . ...+.+.+.++||.++|+.
T Consensus 362 ~~~l~~~l~~~~~-------------~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--- 424 (460)
T 3gju_A 362 RAELAKAVGGHKN-------------VGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP--- 424 (460)
T ss_dssp HHHHHHHHTTSTT-------------EEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---
T ss_pred HHHHHHHHhcCCC-------------eEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---
Confidence 4444444443331 2333444 44555555421 0 2234455557899999964
Q ss_pred CCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
..+++||++ ..+++++++++++|++++++
T Consensus 425 -~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 425 -QGDILGFAPPLCLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp -SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 348999995 45999999999999998763
No 153
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.85 E-value=3.9e-20 Score=161.17 Aligned_cols=242 Identities=14% Similarity=0.067 Sum_probs=153.9
Q ss_pred CCCcccchhh----hhhccCcccccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccC
Q 024997 1 MPFYPLYQEQ----TDYFESVDYKFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 1 ~P~y~~~~~~----~~~~g~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~ 71 (259)
+|.|+..... ++..|.++..+..|+++|++.+++++++|++++|+||||.++ .++|+++|+++|+|++|-.
T Consensus 102 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~ 181 (412)
T 2cb1_A 102 KGLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGA 181 (412)
T ss_dssp TTCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGT
T ss_pred CCCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcc
Confidence 3666654433 333566666667778999999988999999999999999997 3899999999999999931
Q ss_pred CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecC-H--------------------------HHHHHHHHhh-hhhc
Q 024997 72 PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKD-E--------------------------AVYQRMSAYI-SLNT 123 (259)
Q Consensus 72 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~--------------------------~~~~~~~~~~-~~~~ 123 (259)
......+...+.++++.|+||.++.+|.|+|++++.+ + ++.+.++... ....
T Consensus 182 ~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g 261 (412)
T 2cb1_A 182 AGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCG 261 (412)
T ss_dssp TTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTC
T ss_pred ccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcC
Confidence 1111111124578999999999988999999988763 1 3445554433 2222
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEE
Q 024997 124 MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAW 199 (259)
Q Consensus 124 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 199 (259)
...++...+.+...++ .+....++..++.+.+.+.|++.+++.....++.... ..+......+..+.
T Consensus 262 ~~~~~~~a~~~~~~l~---------~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~ 332 (412)
T 2cb1_A 262 MALSPFNAYLLFQGLE---------TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILT 332 (412)
T ss_dssp CCCCHHHHHHHHHHGG---------GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEE
T ss_pred CCCChHHhHHHHcCCc---------hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEE
Confidence 3344544443333333 3445566677888889999988765432211110000 00000012344566
Q ss_pred EecCCCchHHHHHHHHHcCeeeecCC---------ccc----------------CCCCeEEEEeec--ChhhHHHHHHHH
Q 024997 200 VKCEREEDKDCYGILKAAKIIGREGK---------KFR----------------AEARFVRLSLLK--SQDDFDLLLHRL 252 (259)
Q Consensus 200 ~~~~~~~~~~~~~ll~~~gi~~~~g~---------~f~----------------~~~~~~Ris~~~--~~~~~~~~~~~l 252 (259)
+.+ . +.+.+..++++.||.+ .++ .+. ..++.+|+|++. ++++++.+.+.|
T Consensus 333 ~~~-~-~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al 409 (412)
T 2cb1_A 333 LDL-G-DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEAL 409 (412)
T ss_dssp EEC-S-SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred EEe-C-CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 677 4 5677888888899998 764 221 115899999987 445566666665
Q ss_pred HH
Q 024997 253 DE 254 (259)
Q Consensus 253 ~~ 254 (259)
++
T Consensus 410 ~~ 411 (412)
T 2cb1_A 410 EA 411 (412)
T ss_dssp HC
T ss_pred hh
Confidence 43
No 154
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.85 E-value=3.9e-21 Score=170.46 Aligned_cols=236 Identities=9% Similarity=-0.003 Sum_probs=164.3
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhh-H-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQM-N-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~-~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.|...++..|.++. .+.+|+++|++.+++++++|++++| ||||.+ . .++|+++|+++|+|++
T Consensus 163 ~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea 241 (474)
T 1wyu_B 163 DSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGA 241 (474)
T ss_dssp TTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGG
T ss_pred CCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCc
Confidence 4788999988888887652 3467899999999888999999998 689987 2 3899999999999999
Q ss_pred ccCCCCCCCC-CCCCCeEEEeccccccCCC-c---ceEEEEEecCHHHHHHHHH-hh------------------hhhcC
Q 024997 69 YFWPHFAPIP-APADEELMIFTISKLTGHA-G---SRFGWAVIKDEAVYQRMSA-YI------------------SLNTM 124 (259)
Q Consensus 69 y~~~~~~~~~-~~~~~~i~~~S~SK~~g~~-G---~R~G~i~~~~~~~~~~~~~-~~------------------~~~~~ 124 (259)
|......... ...+.++++.|+||.|+.+ | .|+||++++ +++++.+.. .. .....
T Consensus 242 ~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~-~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 320 (474)
T 1wyu_B 242 NLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVK-AHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSF 320 (474)
T ss_dssp GGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEEC-GGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSST
T ss_pred hhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEc-HHHHHhCCCCeeeccCCeeEecccCcccCcccccC
Confidence 9311111111 1224688999999999766 4 599999999 477766541 10 01122
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCee-EEEecC
Q 024997 125 GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAY-AWVKCE 203 (259)
Q Consensus 125 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 203 (259)
+.+.+.+.++..++... ..+.+.+..+++.++++++.+.|+++ ++.+ ..+...++ .|++++
T Consensus 321 ~~~~~~~~aa~~~l~~~----g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~-------------~~~~~~~~~~~~~~~ 382 (474)
T 1wyu_B 321 YGNFLALVRAWAYIRTL----GLEGLKKAAALAVLNARYLKELLKEK-GYRV-------------PYDGPSMHEFVAQPP 382 (474)
T ss_dssp TSCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHT-TCBC-------------SSCSSCCSCEEEBCS
T ss_pred cCcHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhc-CcEe-------------cCCCCcceEEEEEcC
Confidence 35677788777777642 23467777888999999999999876 3221 11111121 455553
Q ss_pred C-CchHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 204 R-EEDKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 204 ~-~~~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
. .+...+.+.|.++||.+ ++..|+. ..+++||+++. +++++++++++|+++++
T Consensus 383 ~~~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 383 EGFRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp TTCCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHCCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 2 23344444444679985 6666653 35899999986 88999999999998875
No 155
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.85 E-value=1.4e-20 Score=164.72 Aligned_cols=207 Identities=11% Similarity=0.013 Sum_probs=143.2
Q ss_pred ccChhhhcccCC---CCceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCC--CCCCC--CCC
Q 024997 22 EGEANLWGNASS---DTHLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPH--FAPIP--APA 81 (259)
Q Consensus 22 ~~d~~~l~~~~~---~~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~--~~~~~--~~~ 81 (259)
.+|+++|++.++ +++++ ++++| |||||.+. .++|+++|+++|+||+| |+.. ...+. +..
T Consensus 188 ~~d~~~l~~~l~~~~~~~~~-vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~ 266 (429)
T 1s0a_A 188 ERDMVGFARLMAAHRHEIAA-VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIA 266 (429)
T ss_dssp GGGGHHHHHHHHHHTTTEEE-EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC
T ss_pred HHHHHHHHHHHHhCCCCEEE-EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCC
Confidence 378888888875 45566 56666 58999643 38899999999999999 4221 11111 222
Q ss_pred CCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhh-----hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 024997 82 DEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYI-----SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 82 ~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 155 (259)
.. +.|+||.++ .| +|+||++++ +++++.+.... ...+++++++.|.++.++++... . +...+
T Consensus 267 ~d---~~t~sK~l~-~G~~~iG~~~~~-~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~---~----~~~~~ 334 (429)
T 1s0a_A 267 PD---ILCLGKALT-GGTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILE---S----GDWQQ 334 (429)
T ss_dssp CS---EEEECGGGG-TSSSCCEEEEEC-HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHH---T----CHHHH
T ss_pred CC---EEEeccccc-CCCccceEEEeC-HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHH---h----CCHHH
Confidence 22 338999998 68 999999999 69988887531 23467789999999988887431 1 13467
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeE
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFV 234 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~ 234 (259)
+++++++.+.+.|+++.. ++. +....+. |.++|++++.. +.+.+...|.++||.+++. .+++
T Consensus 335 ~~~~~~~~l~~~L~~l~~-----~~~-----~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~------~~~i 397 (429)
T 1s0a_A 335 QVADIEVQLREQLAPARD-----AEM-----VADVRVL-GAIGVVETTHPVNMAALQKFFVEQGVWIRPF------GKLI 397 (429)
T ss_dssp HHHHHHHHHHHHHGGGGG-----CTT-----EEEEEEE-TTEEEEEESSCBCHHHHHHHHHHTTEECCCB------TTEE
T ss_pred HHHHHHHHHHHHHHHHhc-----CCC-----EEEEEEe-eEEEEEEECCcccHHHHHHHHHHCCCEEecc------CCEE
Confidence 788888888888876531 111 2223333 55788888652 3444444455789999883 2789
Q ss_pred EEEee--cChhhHHHHHHHHHHHhhh
Q 024997 235 RLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 235 Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
||+++ .+++++++++++|++++++
T Consensus 398 Ris~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 398 YLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 99964 4999999999999998753
No 156
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.85 E-value=2.4e-20 Score=166.91 Aligned_cols=230 Identities=10% Similarity=0.030 Sum_probs=160.4
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
+|+|+.|...++..|..+. .+.+|+++|++.+++++++|++++|+||||.+. .++|+++|+++|+|++|
T Consensus 199 ~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~ 278 (514)
T 3mad_A 199 VSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACL 278 (514)
T ss_dssp TTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred CccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccc
Confidence 4889999999998887652 346789999999988999999999999999997 38999999999999998
Q ss_pred cC----------CCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh----------hhcC-CCC
Q 024997 70 FW----------PHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS----------LNTM-GVS 127 (259)
Q Consensus 70 ~~----------~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~----------~~~~-~~~ 127 (259)
-+ .....+. ...+.++++.|++|.++ .|.++|++++.+ +.......... .... ..+
T Consensus 279 ~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gs~~ 356 (514)
T 3mad_A 279 GGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILYRR-PDLLHYQYFIAADWPGGLYFSPTFAGSRP 356 (514)
T ss_dssp TTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEESS-HHHHTTTCEEESSCTTCSEEESSSCSSCC
T ss_pred ccccchhHHhcCCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEEeC-HHHhccccccccccCCCcccCCccCCCCc
Confidence 21 0011222 23456889999999964 678899999986 44332211000 0001 111
Q ss_pred ---HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC
Q 024997 128 ---RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER 204 (259)
Q Consensus 128 ---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (259)
...+.++...+. ...+.+..+++.++++++.+.|+++++ +....+..+ ++++....
T Consensus 357 ~~~~~a~~aal~~l~-------~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~-~~~~~~~~ 415 (514)
T 3mad_A 357 GALSATAWAAMLSLG-------EEGYLDATRRILQAADRLKAGVRAIPS-------------LKILGDPLW-VIAVASDE 415 (514)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTSTT-------------CEESSCCSS-EEEEECSS
T ss_pred hHHHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHHHHHHHhhCCC-------------eEEeCCCeE-EEEEeCCC
Confidence 233444444443 235677888899999999999987654 333344433 66666655
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~ 257 (259)
.+...+.+.|.++||.+ +|..+ ++.+|++++. +++++++++++|+++++
T Consensus 416 ~~~~~l~~~L~~~Gi~v-~g~~~---~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~ 467 (514)
T 3mad_A 416 LNIYQVMEEMAGRGWRL-NGLHR---PPAFHVALTLRHTEPGVVDRFLADLQDAVA 467 (514)
T ss_dssp SCHHHHHHHHHTTTCBC-EEETT---TTEEEEECCGGGGSTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEe-ccCCC---CCeEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 55555666666789988 55544 3689999973 56899999999998875
No 157
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.85 E-value=8.5e-20 Score=162.64 Aligned_cols=231 Identities=9% Similarity=-0.003 Sum_probs=161.2
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhHH-----HhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMNK-----AVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~-----~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++|++++|+||||.+.+ ++|+++|+++|+|++
T Consensus 165 ~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a 244 (497)
T 3mc6_A 165 VTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSC 244 (497)
T ss_dssp TTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETT
T ss_pred CCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECc
Confidence 4788999999998887652 4578899999999889999999999999999983 899999999999999
Q ss_pred cc------C--CCCC---CCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCC----CC-----
Q 024997 69 YF------W--PHFA---PIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMG----VS----- 127 (259)
Q Consensus 69 y~------~--~~~~---~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~----~~----- 127 (259)
|- . .... .+. ...+.++++.|++|.++ .|.++|++++.+ +..............+ .+
T Consensus 245 ~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~ 322 (497)
T 3mc6_A 245 LGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGF-APKGSSVIMYRN-SDLRMHQYYVNPAWTGGLYGSPTLAGS 322 (497)
T ss_dssp TTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTC-CCSSCEEEECSS-HHHHTTTSCCBTTCTTSCBCCSSSCSS
T ss_pred chhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcC-CCCCceeEEecC-HHHHhhhhcccccccCCCcCCcCcccC
Confidence 92 0 1111 121 23456788999999864 678899999986 4443332111100000 00
Q ss_pred -----HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 128 -----RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 128 -----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
...+.++...+.. ..+.+..++..++.+.+.+.|++ +++ +....+..+.++++.
T Consensus 323 ~~~~~~~a~~aal~~l~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~g-------------~~~~~~~~~~~v~~~ 382 (497)
T 3mc6_A 323 RPGAIVVGCWATMVNMGE-------NGYIESCQEIVGAAMKFKKYIQENIPD-------------LDIMGNPRYSVISFS 382 (497)
T ss_dssp CBHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHSCTT-------------CEECSCCCSSEEEEE
T ss_pred CcchhHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHHhcCCC-------------EEEecCCCeeEEEEe
Confidence 3345556555542 24566788888999999999998 454 333333344444555
Q ss_pred cCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 202 CEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 202 ~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
....+...+.+.|.++||.++++.. +..+|++++. +.+++++++++|+++++
T Consensus 383 ~~~~~~~~l~~~L~~~Gi~v~~~~~----~~~~ri~~~~~t~e~i~~~~~~L~~~l~ 435 (497)
T 3mc6_A 383 SKTLNIHELSDRLSKKGWHFNALQK----PVALHMAFTRLSAHVVDEICDILRTTVQ 435 (497)
T ss_dssp CTTTTHHHHHHHHHTTTCBCEECCS----SCCEEEECCTTTTCTHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCEEEecCCC----CCeEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 5544555666666678998876432 3468999976 88999999999998875
No 158
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.84 E-value=1.3e-19 Score=157.91 Aligned_cols=242 Identities=10% Similarity=0.042 Sum_probs=151.7
Q ss_pred CCcccchhhh----hhccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcC--CCcEEEeeccc
Q 024997 2 PFYPLYQEQT----DYFESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKG--PYAKSIYDHAY 69 (259)
Q Consensus 2 P~y~~~~~~~----~~~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~--~~~~vi~De~y 69 (259)
|.|+.....+ +..|.++..+. .|+++|++++++++++|++++|+||||.++ .++|++ +|+++|+|++|
T Consensus 129 ~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~ 208 (415)
T 2fq6_A 129 TAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTW 208 (415)
T ss_dssp TSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred CCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCC
Confidence 4555444333 23455543222 378899999998999999999999999998 389999 99999999998
Q ss_pred cCCCCCCCCCCCCCeEEEeccccccCCCcce-EEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcc
Q 024997 70 FWPHFAPIPAPADEELMIFTISKLTGHAGSR-FGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNN 148 (259)
Q Consensus 70 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R-~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 148 (259)
-.+ ....+-..+.++++.|+||.+|.+|.+ .||++++ +++++.+...........++...+.+...++
T Consensus 209 a~~-~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~-~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~--------- 277 (415)
T 2fq6_A 209 AAG-VLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCN-ARCWEQLRENAYLMGQMVDADTAYITSRGLR--------- 277 (415)
T ss_dssp TTT-TSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEEC-TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH---------
T ss_pred ccc-ccCCccccCCeEEEEeCccccCCCCCceEEEEEeC-HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh---------
Confidence 211 111111234689999999999988765 5999988 4888888776654445556655554444444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccccccc---cccc-cceeeCCCCCeeEEEecCCC-chHHHHHHHHHc---Cee
Q 024997 149 IFEFGYNTMKKRWENLSKIISLSNRFSLQEIAP---QYCT-YFKKIRPPSPAYAWVKCERE-EDKDCYGILKAA---KII 220 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~---gi~ 220 (259)
.+..+.++..++...+.+.|++.+.+.....+. .... .........+..+++.++.. +.+....+++.. ++.
T Consensus 278 ~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a 357 (415)
T 2fq6_A 278 TLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMA 357 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEe
Confidence 455567778888999999998875432111111 0000 00000012455677778752 234455555544 355
Q ss_pred eecCCc--------------------ccCCCCeEEEEeec--ChhhHHHHHHHHHH
Q 024997 221 GREGKK--------------------FRAEARFVRLSLLK--SQDDFDLLLHRLDE 254 (259)
Q Consensus 221 ~~~g~~--------------------f~~~~~~~Ris~~~--~~~~~~~~~~~l~~ 254 (259)
+..|+. ++...+.+|||++. +++.++.+.+.|++
T Consensus 358 ~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 358 YSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp SCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 555521 22235799999987 34445666565553
No 159
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.84 E-value=3.5e-20 Score=160.68 Aligned_cols=231 Identities=12% Similarity=0.011 Sum_probs=156.1
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++++ |+||||.+. .++|+++|+++|+|++
T Consensus 110 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea 186 (399)
T 2oga_A 110 SHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAA 186 (399)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECT
T ss_pred CCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECc
Confidence 4889999988888887652 357888999999988888755 678999876 3889999999999999
Q ss_pred cc-CC--CCCCCCCCCCCeEEEecc--ccccCCCcceEEEEEecCHHHHHHHHHhhhhh------------cCCCCHHHH
Q 024997 69 YF-WP--HFAPIPAPADEELMIFTI--SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN------------TMGVSRECQ 131 (259)
Q Consensus 69 y~-~~--~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~q 131 (259)
|- +. ....+... .++++.|+ ||.+|.+| |.||++++++++++.+....... ....+++.+
T Consensus 187 ~~~g~~~~~~~~~~~--~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~ 263 (399)
T 2oga_A 187 QAHGARYRGRRIGAG--SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQA 263 (399)
T ss_dssp TCTTCEETTEETTCT--TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHH
T ss_pred ccccCccCCeecccc--cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHH
Confidence 92 11 11111111 26889998 79999779 99999987568888887654421 124567766
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEE--EecCCCchHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAW--VKCEREEDKD 209 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 209 (259)
.++...++ .+++..++.+++.+.+.+.|++++++.+. ..+.++.++| +.+...+.+.
T Consensus 264 a~~~~~l~---------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 322 (399)
T 2oga_A 264 AVLRIRLA---------HLDSWNGRRSALAAEYLSGLAGLPGIGLP------------VTAPDTDPVWHLFTVRTERRDE 322 (399)
T ss_dssp HHHHHHHH---------THHHHHHHHHHHHHHHHHHTTTCTTCBCC------------CCCTTEECCCSSEEEECSSHHH
T ss_pred HHHHHHHH---------HHHHHHHHHHHHHHHHHHHhccCCCcccc------------CCCCCCcceeEEEEEECCCHHH
Confidence 66666665 23334555666677777777765432211 1233444444 2222224555
Q ss_pred HHHHHHHcCeeeecCCcccC---------C-------------CCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFRA---------E-------------ARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~~---------~-------------~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.|.++||.++++..... + .+.+||++.. ++++++.+++.|++++++
T Consensus 323 l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 323 LRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp HHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 66666678999987532100 0 2579999864 899999999999988753
No 160
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.84 E-value=2.2e-20 Score=161.21 Aligned_cols=237 Identities=11% Similarity=0.034 Sum_probs=157.9
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++|+ |+||||.+. .++|+++|+++|+|++
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a 161 (388)
T 1b9h_A 85 AFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAA 161 (388)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECT
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecc
Confidence 4889999988888887652 356888999999988888755 999999887 3889999999999999
Q ss_pred cc-CC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHH--HHHHHHhhhhh---------------cCCCCH
Q 024997 69 YF-WP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAV--YQRMSAYISLN---------------TMGVSR 128 (259)
Q Consensus 69 y~-~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~--~~~~~~~~~~~---------------~~~~~~ 128 (259)
|- +. ....+... .++.+.||||..+++|.|.||++++++.+ ++.+....... ....+.
T Consensus 162 ~~~g~~~~~~~~~~~--~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 239 (388)
T 1b9h_A 162 HAHGARWQGKRVGEL--DSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNE 239 (388)
T ss_dssp TCTTCEETTEEGGGS--SSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBH
T ss_pred hhcCCccCCeecccc--cceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCH
Confidence 92 11 11112111 26889999977766778999999985336 56665432210 011333
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--- 205 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 205 (259)
+..+++ .. ..+++++.+++++++++.+.+.|++++++.+. .+ -....+.+++++|+.++..
T Consensus 240 ~~~a~~---~~------~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~ 303 (388)
T 1b9h_A 240 FSASVL---RA------QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQ--GG-----DVRADRNSHYMAMFRIPGLTEE 303 (388)
T ss_dssp HHHHHH---HH------HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEEC--CC-----CTTCCBCCCSEEEEECTTCCHH
T ss_pred HHHHHH---HH------HHHHHHHHHHHHHHHHHHHHHHhccCCCcccc--CC-----CcCCCccceEEEEEEeCCcCcc
Confidence 322222 22 12356677888889999999999876542211 00 0000135578999999763
Q ss_pred chHHHHHHHHHcCeeeecCCcccC----------------------------CCCeEEEEeec---ChhhHHHHHHHHHH
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRA----------------------------EARFVRLSLLK---SQDDFDLLLHRLDE 254 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~----------------------------~~~~~Ris~~~---~~~~~~~~~~~l~~ 254 (259)
+.+.+.+.|.++||.++++..-.. ..+.+||++.. ++++++.+++.|++
T Consensus 304 ~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 304 RRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp HHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 344455566678999988642100 01358999864 68899999999999
Q ss_pred Hhhh
Q 024997 255 LISK 258 (259)
Q Consensus 255 ~l~~ 258 (259)
++++
T Consensus 384 ~~~~ 387 (388)
T 1b9h_A 384 AVAR 387 (388)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8764
No 161
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.84 E-value=1.5e-20 Score=165.72 Aligned_cols=204 Identities=13% Similarity=0.032 Sum_probs=134.1
Q ss_pred CCCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEEeccccccCCCcc
Q 024997 33 SDTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMIFTISKLTGHAGS 99 (259)
Q Consensus 33 ~~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~ 99 (259)
.++...+++++|.|++|.+. .++|+++|+++|+||+| |+....... ...+....+.||||.++ .|+
T Consensus 224 ~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~ 302 (451)
T 3oks_A 224 GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIA-GGL 302 (451)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TTS
T ss_pred CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhh-CCc
Confidence 44555568888887776443 28899999999999999 422111111 11111122349999998 599
Q ss_pred eEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 024997 100 RFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEI 179 (259)
Q Consensus 100 R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 179 (259)
|+||++++ +++++.+.......+++.+++.|+++.++++...+ +++ .++++++.+.+.+.|+++.. .+
T Consensus 303 ~iG~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~----~~~~~~~~~~l~~~L~~~~~----~~ 370 (451)
T 3oks_A 303 PLSAVTGR-AEIMDSPHVSGLGGTYGGNPIACAAALATIETIES---EGL----VARAQQIEKIMKDRLGRLQA----ED 370 (451)
T ss_dssp SCEEEEEE-HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTH----HHHHHHHHHHHHHHHHHHHH----HC
T ss_pred ceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh---hhH----HHHHHHHHHHHHHHHHHHHh----hC
Confidence 99999999 79999887666667889999999999999885311 233 44555555555555554310 00
Q ss_pred cccccccceeeCCCCCeeEEEecCC-----C---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHH
Q 024997 180 APQYCTYFKKIRPPSPAYAWVKCER-----E---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLL 249 (259)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~ 249 (259)
+ .+....+ .|.++|+.+.. . ....+...+.++||.++|+..|+ +++|+++.. +++++++++
T Consensus 371 ~-----~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~---~~iRi~~~~~~t~e~i~~~l 441 (451)
T 3oks_A 371 D-----RIGDVRG-RGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYG---NVVRFLPPLSIGDDLLNEGL 441 (451)
T ss_dssp T-----TEEEEEE-ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTS---CEEEECCCTTCCHHHHHHHH
T ss_pred C-----CeEEEEE-eeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCC---CEEEEECCCCCCHHHHHHHH
Confidence 0 0222233 35566776632 1 12334455557899999975543 689998653 899999999
Q ss_pred HHHHHHhhh
Q 024997 250 HRLDELISK 258 (259)
Q Consensus 250 ~~l~~~l~~ 258 (259)
++|++++++
T Consensus 442 ~~l~~~l~~ 450 (451)
T 3oks_A 442 DVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999999875
No 162
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.83 E-value=1.6e-20 Score=164.57 Aligned_cols=210 Identities=11% Similarity=0.051 Sum_probs=135.0
Q ss_pred ChhhhcccCC---CCceEEEEcCCCC-CChhhH---------HHhhcCCCcEEEeeccccC-CCCCCCC-CCCCCeEEEe
Q 024997 24 EANLWGNASS---DTHLVEFVTAPNN-PDGQMN---------KAVLKGPYAKSIYDHAYFW-PHFAPIP-APADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~N-PtG~~~---------~~la~~~~~~vi~De~y~~-~~~~~~~-~~~~~~i~~~ 88 (259)
|+++|++.+. +++++ ++++|+| ++|.+. .++|+++|+++|+||+|-+ ....... ...+....+.
T Consensus 188 d~~~le~~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~ 266 (434)
T 3l44_A 188 NVETLKEALDKWGHEVAA-ILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT 266 (434)
T ss_dssp CHHHHHHHHHHHGGGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE
T ss_pred cHHHHHHHHHhCCCCEEE-EEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCee
Confidence 7788888874 34555 5566655 555443 2899999999999999921 1111110 0011111256
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHh---hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAY---ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
|+||.++ +|+|+||++++ +++++.+... ....+++.+++.|.++.++++.. ..++ ..++++++.+.+.
T Consensus 267 t~sK~~~-~G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~---~~~~----~~~~~~~~~~~l~ 337 (434)
T 3l44_A 267 ALGKVIG-GGLPIGAYGGK-KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVL---QQEG----LYEKLDELGATLE 337 (434)
T ss_dssp EEEGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHH---TSTT----HHHHHHHHHHHHH
T ss_pred ehhhhhc-CCcCeeeEEEc-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHH---Hccc----HHHHHHHHHHHHH
Confidence 8999998 89999999998 7999887652 23456888999999999988853 1223 3555666666666
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--------------chHHHHHHHHHcCeeeecCCcccCCC
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--------------EDKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
+.|+++.. .++ ...... ..|.++++.+... ..+.+.+.|.++||.++|+. .
T Consensus 338 ~~L~~~~~----~~~-----~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~ 402 (434)
T 3l44_A 338 KGILEQAA----KHN-----IDITLN-RLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK-----Y 402 (434)
T ss_dssp HHHHHHHH----HTT-----CCEEEE-EETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST-----T
T ss_pred HHHHHHHH----hCC-----CCEEEE-eeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC-----C
Confidence 66655320 000 011222 3345556655321 11334455557899999853 3
Q ss_pred CeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+|+++..+++++++++++|++++++
T Consensus 403 ~~~rl~~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 403 EAWFLTTEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp CCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecccCHHHHHHHHHHHHHHHHH
Confidence 578998777999999999999998763
No 163
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.83 E-value=2.7e-19 Score=154.98 Aligned_cols=215 Identities=11% Similarity=0.021 Sum_probs=149.9
Q ss_pred ccccChhhhcccCCC-CceEEEEcCCCC-CChhhH---HHhhcCCCcEEEeecccc----CCCCCCCCCCCCCeEEEecc
Q 024997 20 KFEGEANLWGNASSD-THLVEFVTAPNN-PDGQMN---KAVLKGPYAKSIYDHAYF----WPHFAPIPAPADEELMIFTI 90 (259)
Q Consensus 20 ~~~~d~~~l~~~~~~-~~~~i~i~~p~N-PtG~~~---~~la~~~~~~vi~De~y~----~~~~~~~~~~~~~~i~~~S~ 90 (259)
.+.+|+++|++.+++ +++++++ +|+| |.-.-+ .++|+++|+++|+||+|. ....... ......++++|+
T Consensus 147 ~~~~d~~~l~~~i~~~~~~~v~~-~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-~~~~~di~~~s~ 224 (405)
T 2vi8_A 147 THVIDYDDVREKARLHRPKLIVA-AAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPN-PVPYAHFVTTTT 224 (405)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEE-CCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC-STTTCSEEEEES
T ss_pred cCCcCHHHHHHHHHhcCCeEEEE-eCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCC-ccccCCEEEEec
Confidence 356888999988865 7788666 5554 322112 388999999999999992 1111111 111345899999
Q ss_pred ccccC-CCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHH-HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 91 SKLTG-HAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRA-FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 91 SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
||.++ ..| ||++++ +++++.+.........+.+.+.|.++ .++++.. ...++++.+++++++++.+.+.|
T Consensus 225 sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~----~~~~~~~~~~~~~~~~~~l~~~L 296 (405)
T 2vi8_A 225 HKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEA----LQDDFKAYAKRVVDNAKRLASAL 296 (405)
T ss_dssp SSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH----HSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHH----HhhhHHHHHHHHHHHHHHHHHHH
Confidence 99996 677 999999 79999888765444444434444443 4566532 12467788999999999999999
Q ss_pred HhcCCCccccccccccccceeeCC-CCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCc----ccC-CCCeEEEEeec
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKK----FRA-EARFVRLSLLK 240 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~----f~~-~~~~~Ris~~~ 240 (259)
++++ +....+ ..++++|++++.. +.+.+.+.|.++||.+++|.. ++. .++++|+|++.
T Consensus 297 ~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~ 362 (405)
T 2vi8_A 297 QNEG--------------FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAA 362 (405)
T ss_dssp HHTT--------------CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHH
T ss_pred HhCC--------------CeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeee
Confidence 8762 333333 4578889998742 455566677789999999862 332 35789999973
Q ss_pred ------ChhhHHHHHHHHHHHhhh
Q 024997 241 ------SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ------~~~~~~~~~~~l~~~l~~ 258 (259)
+++++++++++|++++++
T Consensus 363 ~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 363 VTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred eeecCCCHHHHHHHHHHHHHHHhc
Confidence 799999999999998753
No 164
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.83 E-value=1e-20 Score=165.09 Aligned_cols=196 Identities=12% Similarity=0.056 Sum_probs=134.9
Q ss_pred Chhhhc-ccCC-----CCceEEEEcCCC-CCChhh-H--------HHhhcCCCcEEEeeccc--cCC--CCCCCC--CCC
Q 024997 24 EANLWG-NASS-----DTHLVEFVTAPN-NPDGQM-N--------KAVLKGPYAKSIYDHAY--FWP--HFAPIP--APA 81 (259)
Q Consensus 24 d~~~l~-~~~~-----~~~~~i~i~~p~-NPtG~~-~--------~~la~~~~~~vi~De~y--~~~--~~~~~~--~~~ 81 (259)
|+++|+ +.++ +++++ ++++|+ ||||.+ + .++|+++|+++|+||+| |.. ....+. +..
T Consensus 195 ~~~~l~~~~i~~~~~~~~~~~-vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~ 273 (419)
T 2eo5_A 195 VIEFIEDYIFVNLVPPEEVAG-IFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTV 273 (419)
T ss_dssp HHHHHHHTHHHHTCCGGGEEE-EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC
T ss_pred HHHHHHHHHHhhccCCCCEEE-EEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCC
Confidence 567888 7774 34455 667776 578963 3 28899999999999999 421 111111 222
Q ss_pred CCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 82 DEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 82 ~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+. +.||||.++ .| +|+||++++ ++++ .+ ......+++.+++.|.++.++++.. .+.+++++++
T Consensus 274 ~d---~~t~sK~~~-~G~~riG~~~~~-~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~---------~~~~~~~~~~ 337 (419)
T 2eo5_A 274 PD---VITLAKALG-GGIMPIGATIFR-KDLD-FK-PGMHSNTFGGNALACAIGSKVIDIV---------KDLLPHVNEI 337 (419)
T ss_dssp CS---EEEECGGGG-TTTSCCEEEEEE-GGGC-CC-------CCCCCHHHHHHHHHHHHHH---------HHHHHHHHHH
T ss_pred CC---EEEeccccc-CCccceEEEEEc-hHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHH---------HHHHHHHHHH
Confidence 22 338999999 59 999999999 5877 66 3234456888999999999999842 2267888889
Q ss_pred HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecC-CC-chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCE-RE-EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL 238 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~ 238 (259)
++.+.+.|+++ +....+ .|.++|+++. .. ..+ +.+.|.++||.++|+. .+++||++
T Consensus 338 ~~~l~~~L~~~---------------~~~~~~-~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~-----~~~lRis~ 395 (419)
T 2eo5_A 338 GKIFAEELQGL---------------ADDVRG-IGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG-----RSAIRVIP 395 (419)
T ss_dssp HHHHHHHHTTS---------------SSEEEE-ETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET-----TTEEEECC
T ss_pred HHHHHHHHHHh---------------hhheEe-eeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC-----CCEEEEEC
Confidence 99998888753 011223 3567788884 21 133 4444457899999953 57999987
Q ss_pred e--cChhhHHHHHHHHHHHhhh
Q 024997 239 L--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+ .+++++++++++|++++++
T Consensus 396 ~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 396 PLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHh
Confidence 5 4899999999999998764
No 165
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.82 E-value=8.6e-20 Score=161.15 Aligned_cols=205 Identities=14% Similarity=0.092 Sum_probs=131.5
Q ss_pred hhhhcccCC----CCceEEEEcCCCCC-ChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCe
Q 024997 25 ANLWGNASS----DTHLVEFVTAPNNP-DGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEE 84 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p~NP-tG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~ 84 (259)
+++|++.+. +++++ ++++|+|+ +|.+. .++|+++|+++|+||+| |+....... +....
T Consensus 205 ~~~le~~i~~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pd- 282 (459)
T 4a6r_A 205 ARWLEEKILEIGADKVAA-FVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPD- 282 (459)
T ss_dssp HHHHHHHHHHHCGGGEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS-
T ss_pred HHHHHHHHHHcCCCCEEE-EEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC-
Confidence 567777774 34455 66666554 44433 38999999999999999 422111111 22222
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHH---HhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH-HH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMS---AYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK-KR 160 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~ 160 (259)
+.||||.++..|+|+||++++ +++++.+. ......+++.+++.|+++.++|+... .+++ .++++ ++
T Consensus 283 --i~t~sK~l~gg~~~lg~v~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~~~~----~~~~~~~~ 352 (459)
T 4a6r_A 283 --LFTAAKGLSSGYLPIGAVFVG-KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALR---DEGI----VQRVKDDI 352 (459)
T ss_dssp --EEEECGGGGTTSSCCEEEEEC-HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHH---HTCH----HHHHHHTH
T ss_pred --eeehhhhhcCCCCCccceeeC-HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHh---cchH----HHHHHHHH
Confidence 447899997555999999999 79999987 34445568899999999999998531 1233 44455 55
Q ss_pred HHHHHHHH-HhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c-----------hHHHHHHHHHcCeeeecCCcc
Q 024997 161 WENLSKII-SLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E-----------DKDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 161 ~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~ll~~~gi~~~~g~~f 227 (259)
.+.+.+.| +.+.... .+....+. |.++++.+... . ...+.+.+.++||.++|+
T Consensus 353 ~~~~~~~l~~~l~~~~----------~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~--- 418 (459)
T 4a6r_A 353 GPYMQKRWRETFSRFE----------HVDDVRGV-GMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC--- 418 (459)
T ss_dssp HHHHHHHHHHHHTTCT----------TEEEEEEE-TTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE---
T ss_pred HHHHHHHHHHHHhcCC----------CeEEEEEE-EEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC---
Confidence 55555555 3332110 13333444 44555555321 0 233444455679999985
Q ss_pred cCCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 228 RAEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 228 ~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
+ +++||++ ..+++++++++++|++++++
T Consensus 419 --g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 419 --G-DHIVSAPPLVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp --T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 7999995 45999999999999988753
No 166
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.82 E-value=9.4e-20 Score=160.05 Aligned_cols=206 Identities=11% Similarity=0.039 Sum_probs=143.1
Q ss_pred cChhhhcccC-CCCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeE
Q 024997 23 GEANLWGNAS-SDTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEEL 85 (259)
Q Consensus 23 ~d~~~l~~~~-~~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i 85 (259)
.|+++|++.+ ++++++ ++++| +|++|.+. .++|+++|+++|+||+| |+.....+. +... .+
T Consensus 210 ~d~~~le~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~-Di 287 (439)
T 2oat_A 210 NDLPALERALQDPNVAA-FMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRP-DI 287 (439)
T ss_dssp SCHHHHHHHTTSTTEEE-EEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCC-SE
T ss_pred CCHHHHHHHhCCCCEEE-EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCC-cE
Confidence 4788899988 466777 44556 46789643 38999999999999999 322111111 1112 22
Q ss_pred EEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 86 ~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
.|+||.++ .| +|+||++++ +++++.+.......+++.+++.+.++.+.++...+ +...++++++.+.+
T Consensus 288 --~t~sK~l~-~G~~~~G~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-------~~~~~~~~~~~~~l 356 (439)
T 2oat_A 288 --VLLGKALS-GGLYPVSAVLCD-DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE-------ENLAENADKLGIIL 356 (439)
T ss_dssp --EEECGGGG-TTSSCCEEEEEC-HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-------TTHHHHHHHHHHHH
T ss_pred --EEeccccc-CCCCCeEEEEEC-HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHH
Confidence 39999998 69 999999999 69888776544455678899999988888875311 13467788888888
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-- 239 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-- 239 (259)
.+.|++++ +. .+...+ ..|.++|+.++.. +...+...|.++||.+.|+ +++++|+++.
T Consensus 357 ~~~L~~l~-~~----------~~~~~~-~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~-----~~~~iRi~~~~~ 419 (439)
T 2oat_A 357 RNELMKLP-SD----------VVTAVR-GKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT-----HGDIIRFAPPLV 419 (439)
T ss_dssp HHHHTTSC-TT----------TEEEEE-EETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS-----SSSEEEECCCTT
T ss_pred HHHHHHhc-CC----------CcEEEE-eeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC-----CCCEEEEECccC
Confidence 88887652 11 011222 3456778887643 2334444455689999983 3589999875
Q ss_pred cChhhHHHHHHHHHHHhhh
Q 024997 240 KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++++++++|++++++
T Consensus 420 ~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 420 IKEDELRESIEIINKTILS 438 (439)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4999999999999998864
No 167
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.82 E-value=1.9e-20 Score=163.72 Aligned_cols=219 Identities=12% Similarity=0.044 Sum_probs=142.4
Q ss_pred cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCC----------cEEEeeccccCCCCCCCC-CCCCCe
Q 024997 21 FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPY----------AKSIYDHAYFWPHFAPIP-APADEE 84 (259)
Q Consensus 21 ~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~----------~~vi~De~y~~~~~~~~~-~~~~~~ 84 (259)
+.+|+++|++.++++++++++++|+||||.++ .++|+++| +++|+|++|.... ..+. ...+..
T Consensus 161 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~-~~~~~~~~~~d 239 (432)
T 3a9z_A 161 GQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK-RRVDVEDLGVD 239 (432)
T ss_dssp SSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT-SCCCHHHHCCS
T ss_pred CCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCC-cccChhhcCCC
Confidence 35788999999988899999999999999998 38899998 9999999993111 1111 111245
Q ss_pred EEEeccccccCCCcceEEEEEecCHHH-HHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAV-YQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNT 156 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~-~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (259)
+++.|+||.+| .|+||+++++ ++ ...+... .......++.+.+.++.++++.. ++++++.+++
T Consensus 240 ~~~~s~~K~~g---~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-----~~~~~~~~~~ 310 (432)
T 3a9z_A 240 FLTIVGHKFYG---PRIGALYVRG-VGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-----SENCETYEAH 310 (432)
T ss_dssp EEEEEGGGTTC---CSCEEEEETT-BTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred EEEEehhHhcC---CcceEEEEcc-ccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-----HhhHHHHHHH
Confidence 67999999875 5699999984 54 2222211 11122446677777776777642 2356778889
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccC-----
Q 024997 157 MKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRA----- 229 (259)
Q Consensus 157 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~----- 229 (259)
++++++.+.+.|+++.++.+....+.. -....+..+++.+... +.+.+...+ .++.+.+|..+..
T Consensus 311 ~~~~~~~l~~~L~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~ 382 (432)
T 3a9z_A 311 MRDIRDYLEERLEAEFGKRIHLNSRFP------GVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDR 382 (432)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEESSCCT------TCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTS
T ss_pred HHHHHHHHHHHHHhccCCcEEEeCCCC------cccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCC
Confidence 999999999999875432211000000 0012233444555432 233333323 3777777754432
Q ss_pred --------------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 230 --------------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 230 --------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
..+++|||++. +++++++++++|+++++
T Consensus 383 ~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 383 PSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp CCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 13799999976 89999999999998875
No 168
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.82 E-value=5.9e-20 Score=161.05 Aligned_cols=208 Identities=11% Similarity=0.076 Sum_probs=143.2
Q ss_pred cChhhhcccC-CCCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeE
Q 024997 23 GEANLWGNAS-SDTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEEL 85 (259)
Q Consensus 23 ~d~~~l~~~~-~~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i 85 (259)
.|+++|++.+ ++++++ ++++| +|++|.+. .++|+++|+++|+||+| |+....... +... .
T Consensus 199 ~d~~~le~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~-d- 275 (433)
T 1z7d_A 199 DDLEALEEELKDPNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKP-D- 275 (433)
T ss_dssp TCHHHHHHHHTSTTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCC-S-
T ss_pred CCHHHHHHHhCCCCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCC-C-
Confidence 4788899888 567777 45555 56789753 38999999999999999 322111111 1112 2
Q ss_pred EEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 86 ~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+.|+||.+| +| +|+||++++ +++++.+.......+++.+++.++++.+.++...+ ++..++++++.+.+
T Consensus 276 -i~t~sK~l~-~G~~~~G~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-------~~~~~~~~~~~~~l 345 (433)
T 1z7d_A 276 -VILLGKALS-GGHYPISAVLAN-DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN-------EKLCENAEKLGGPF 345 (433)
T ss_dssp -EEEECGGGG-TTSSCCEEEEEC-HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH-------TTHHHHHHHHHHHH
T ss_pred -EEEECcccc-CCCCCeEEEEEC-HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHH
Confidence 339999999 89 999999999 69888776544455678899999988888875311 12466777888888
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--c
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--K 240 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~ 240 (259)
.+.|+++.. .++ .+.... ..|.++|+.++.. +...+.+.|.++||.++|+ +.+++|++++ .
T Consensus 346 ~~~L~~l~~----~~~-----~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~-----~~~~iRi~~~~~~ 410 (433)
T 1z7d_A 346 LENLKRELK----DSK-----IVRDVR-GKGLLCAIEFKNELVNVLDICLKLKENGLITRDV-----HDKTIRLTPPLCI 410 (433)
T ss_dssp HHHHHHHHT----TCT-----TEEEEE-EETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE-----TTTEEEECCCTTC
T ss_pred HHHHHHHHH----hCC-----CeEEEE-eeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC-----CCCEEEEECCcCC
Confidence 888876520 011 012222 3466778887653 2334444455689999985 3589999875 3
Q ss_pred ChhhHHHHHHHHHHHhhh
Q 024997 241 SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~ 258 (259)
+++++++++++|++++++
T Consensus 411 t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 411 TKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999988753
No 169
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.82 E-value=1.3e-18 Score=151.28 Aligned_cols=215 Identities=12% Similarity=0.041 Sum_probs=151.3
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CCC-CCCCCCCCCCeEEEecc
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WPH-FAPIPAPADEELMIFTI 90 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~~-~~~~~~~~~~~i~~~S~ 90 (259)
+.+|+++|++.++ +++++|++++|+|++-.-+ .++|+++|+++|+||+++ ... ...+ ...+++++|+
T Consensus 149 ~~~d~~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~~~di~~~s~ 225 (417)
T 3n0l_A 149 GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF---PYAHVVSSTT 225 (417)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT---TTCSEEEEES
T ss_pred CCcCHHHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc---ccceEEEeeC
Confidence 5688999999886 6889988888887433223 389999999999999972 211 1111 2457999999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhhhhhcC-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Q 024997 91 SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM-GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIIS 169 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (259)
||.+ +|+|.||++++++++.+.+......... +++...+.++..++... .+..+.+.++++.++++.+.+.|+
T Consensus 226 sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~----~~~~~~~~~~~~~~~~~~l~~~L~ 299 (417)
T 3n0l_A 226 HKTL--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFN----LSDEWKVYAKQVRTNAQVLANVLM 299 (417)
T ss_dssp STTT--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH----TSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHH----HhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9988 6888999999866888888776554333 33444444444455431 334567788889999999999998
Q ss_pred hcCCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccC-----CCCeEEEEeec-
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRA-----EARFVRLSLLK- 240 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~-----~~~~~Ris~~~- 240 (259)
+.+ +.... +..+.++|+++... +.+.+.++|+++||.++++..+.. ..+.+|+++..
T Consensus 300 ~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~ 365 (417)
T 3n0l_A 300 DRK--------------FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPAL 365 (417)
T ss_dssp HTT--------------CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHH
T ss_pred hCC--------------ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHH
Confidence 733 22222 24456788887542 567788888889999987643321 24679999742
Q ss_pred -----ChhhHHHHHHHHHHHhhh
Q 024997 241 -----SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 -----~~~~~~~~~~~l~~~l~~ 258 (259)
+++++++++++|++++++
T Consensus 366 ~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 366 TARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHT
T ss_pred hhCCCCHHHHHHHHHHHHHHHhc
Confidence 579999999999998763
No 170
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.82 E-value=6.3e-19 Score=153.26 Aligned_cols=214 Identities=11% Similarity=0.057 Sum_probs=148.0
Q ss_pred cccChhhhcccCCC-CceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CCCCCCCCCCCCCeEEEeccc
Q 024997 21 FEGEANLWGNASSD-THLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WPHFAPIPAPADEELMIFTIS 91 (259)
Q Consensus 21 ~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~~~~~~~~~~~~~i~~~S~S 91 (259)
+.+|+++|++.+++ +++++++++|+||+-.-+ .++|+++|+++|+||+|+ ...... .....+++++|+|
T Consensus 154 ~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~di~~~s~s 231 (420)
T 3gbx_A 154 GKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPN--PVPHAHVVTTTTH 231 (420)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCC--STTTSSEEEEESS
T ss_pred CCcCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCc--ccccCCEEEeecc
Confidence 45889999998865 689989999999863333 388999999999999972 111111 1223569999999
Q ss_pred cccCCCcceEEEEEecC--HHHHHHHHHhhhhhcC-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 92 KLTGHAGSRFGWAVIKD--EAVYQRMSAYISLNTM-GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~--~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
|.++ |.+.||+++++ +++.+.+......... +++...+.++...+.. ..+.++++.++++.++++.+.+.|
T Consensus 232 K~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~l~~~L 305 (420)
T 3gbx_A 232 KTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKE----AMEPEFKVYQQQVAKNAKAMVEVF 305 (420)
T ss_dssp GGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHH----TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHH----HHhHhHHHHHHHHHHHHHHHHHHH
Confidence 9995 44459999983 2787777665443323 3344444444444443 234567788899999999999999
Q ss_pred HhcCCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHHHHHHHHcCeeeec-------CCcccCCCCeEEEEe
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDCYGILKAAKIIGRE-------GKKFRAEARFVRLSL 238 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~-------g~~f~~~~~~~Ris~ 238 (259)
++.+ +.... +..+.++|+.+... +.+.+.++|+++||.+++ |..|+ +..+||++
T Consensus 306 ~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~--~~~iRi~~ 369 (420)
T 3gbx_A 306 LNRG--------------YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFV--TSGIRIGS 369 (420)
T ss_dssp HHTT--------------CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTT--CSEEEEEC
T ss_pred HhcC--------------CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCC--CcceEEec
Confidence 8743 22222 24677888887542 467777888889999998 33333 35699998
Q ss_pred ec------ChhhHHHHHHHHHHHhhh
Q 024997 239 LK------SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~~------~~~~~~~~~~~l~~~l~~ 258 (259)
.. ++++++.+++.|++++++
T Consensus 370 ~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 370 PAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred chhcccCCCHHHHHHHHHHHHHHHhC
Confidence 53 468899999999988764
No 171
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.82 E-value=1.6e-19 Score=156.75 Aligned_cols=229 Identities=11% Similarity=0.042 Sum_probs=149.1
Q ss_pred ccCcccccc-cChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccccCCC-CCCCCCCCCCeEE
Q 024997 14 FESVDYKFE-GEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYFWPH-FAPIPAPADEELM 86 (259)
Q Consensus 14 ~g~~~~~~~-~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~~~~-~~~~~~~~~~~i~ 86 (259)
.|.++..+. .|+++|++.+++++++|++++|+||||.++ .++|+++|+++|+||+|-.+. ..++ ..+.+++
T Consensus 130 ~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~--~~g~div 207 (400)
T 3nmy_A 130 AGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL--SLGADLV 207 (400)
T ss_dssp HCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG--GGTCSEE
T ss_pred cCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh--hcCCcEE
Confidence 465553332 367889999998999999999999999997 389999999999999982000 0111 1246799
Q ss_pred EeccccccCCCcceEEE--EEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 87 IFTISKLTGHAGSRFGW--AVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 87 ~~S~SK~~g~~G~R~G~--i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+.|+||.++.+|.++|. ++..++++.+.+.......+.+.++...+++.+.++ .+..+.++..++...+
T Consensus 208 ~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~---------~l~~r~~~~~~~a~~l 278 (400)
T 3nmy_A 208 VHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLK---------TLPLRMRAHCENALAL 278 (400)
T ss_dssp EEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT---------THHHHHHHHHHHHHHH
T ss_pred EecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh---------HHHHHHHHHHHHHHHH
Confidence 99999999878877755 555447899999888777778888887776666665 3556678889999999
Q ss_pred HHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCCchHHHHHHHHHc---CeeeecCCccc---------
Q 024997 165 SKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCEREEDKDCYGILKAA---KIIGREGKKFR--------- 228 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~~~~g~~f~--------- 228 (259)
.+.|++.+.+.....+..... .++......|..+++.++.. .+....++++. ++.+..|..+.
T Consensus 279 ~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~-~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~ 357 (400)
T 3nmy_A 279 AQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGG-FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMT 357 (400)
T ss_dssp HHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH-HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTT
T ss_pred HHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCc-HHHHHHHHHcCCcceEecCCCCCcceeeCccccc
Confidence 999988765432222210000 00000123466778888642 23344444433 44444443221
Q ss_pred -------------CCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 229 -------------AEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 229 -------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..++.+|+|++. ++.+++++.|.+.|
T Consensus 358 ~~~~~~~~~~~~gi~~~liRlsvGl--e~~~dli~dl~~al 396 (400)
T 3nmy_A 358 HASIPVARREQLGISDALVRLSVGI--EDLGDLRGDLERAL 396 (400)
T ss_dssp TTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHH
Confidence 135789999987 33334445555544
No 172
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.82 E-value=8.8e-20 Score=161.17 Aligned_cols=232 Identities=14% Similarity=0.072 Sum_probs=146.9
Q ss_pred CCcccchhhhhhccCccc----------------ccccChhhhcccCC----CCceEEEEcCCCCCC-hhhH--------
Q 024997 2 PFYPLYQEQTDYFESVDY----------------KFEGEANLWGNASS----DTHLVEFVTAPNNPD-GQMN-------- 52 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~----------------~~~~d~~~l~~~~~----~~~~~i~i~~p~NPt-G~~~-------- 52 (259)
|.|+.+...+...|.... .+.+|+++|++.++ +++++|++++||||| |.++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i 209 (467)
T 1ax4_A 130 FHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEV 209 (467)
T ss_dssp SCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHH
T ss_pred cccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHH
Confidence 455665666666555431 23578899998885 368999999999999 7664
Q ss_pred HHhhcCCCcEEEeeccc-c-----------CCCCCCCCCC-----CCCeEEEeccccccCCC-cceEEEEEecCH-HHHH
Q 024997 53 KAVLKGPYAKSIYDHAY-F-----------WPHFAPIPAP-----ADEELMIFTISKLTGHA-GSRFGWAVIKDE-AVYQ 113 (259)
Q Consensus 53 ~~la~~~~~~vi~De~y-~-----------~~~~~~~~~~-----~~~~i~~~S~SK~~g~~-G~R~G~i~~~~~-~~~~ 113 (259)
.++|+++|+++|+|+++ | .....++... ....+++.|+||.+|++ | ||++.+++ ++++
T Consensus 210 ~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~d~~~l~~ 286 (467)
T 1ax4_A 210 YEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG---GLVAIRDNEEIFT 286 (467)
T ss_dssp HHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC---EEEEESSCHHHHH
T ss_pred HHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc---eEEEeCCHHHHHH
Confidence 38999999999999975 2 1111111110 11235679999999876 5 77777755 7888
Q ss_pred HHHHhhhhh----cCC-CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccce
Q 024997 114 RMSAYISLN----TMG-VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFK 188 (259)
Q Consensus 114 ~~~~~~~~~----~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 188 (259)
.+....... ..+ .+...+.++...++.. .+ .+..+...++++.+.+.|++. + +.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~l~~~L~~~-~-------------~~ 345 (467)
T 1ax4_A 287 LARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEG----TE---EEYLHYRIGQVKYLGDRLREA-G-------------IP 345 (467)
T ss_dssp HHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHT----TC---HHHHHHHHHHHHHHHHHHHHT-T-------------CC
T ss_pred HHHhhccccccccccCCccchHHHHHHHHHHHh----hh---hhHHHHHHHHHHHHHHHHHhC-C-------------CC
Confidence 776554321 122 2333333333345421 11 112333446677778888762 2 33
Q ss_pred eeCCCCCeeEEEe-------cCCC--c-hHHHHHHHHHcCeeeec-CCcc-cC----------CCCeEEEEee---cChh
Q 024997 189 KIRPPSPAYAWVK-------CERE--E-DKDCYGILKAAKIIGRE-GKKF-RA----------EARFVRLSLL---KSQD 243 (259)
Q Consensus 189 ~~~~~~~~~~~~~-------~~~~--~-~~~~~~ll~~~gi~~~~-g~~f-~~----------~~~~~Ris~~---~~~~ 243 (259)
...+.+++++|++ ++.. + .++...+++++||.+.| |..+ +. ..+++|||+. .+.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e 425 (467)
T 1ax4_A 346 IQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTND 425 (467)
T ss_dssp BCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHH
T ss_pred cccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHH
Confidence 4467789999998 4321 2 34455554889999999 6542 11 1379999997 3789
Q ss_pred hHHHHHHHHHHHhh
Q 024997 244 DFDLLLHRLDELIS 257 (259)
Q Consensus 244 ~~~~~~~~l~~~l~ 257 (259)
++++++++|+++++
T Consensus 426 ~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 426 HMDYIADALIGLKE 439 (467)
T ss_dssp HHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998775
No 173
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.82 E-value=5.6e-19 Score=152.45 Aligned_cols=234 Identities=10% Similarity=-0.010 Sum_probs=157.0
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. ++.+|+++|++.+++++++++++ ||||.+. .++|+++|+++|+|++
T Consensus 86 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a 162 (393)
T 1mdo_A 86 SMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAA 162 (393)
T ss_dssp SSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECT
T ss_pred CCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECc
Confidence 5889999888888887652 25588899999998888887765 4788876 3889999999999999
Q ss_pred cc-C--CCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc----------------------
Q 024997 69 YF-W--PHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT---------------------- 123 (259)
Q Consensus 69 y~-~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~---------------------- 123 (259)
|. + .....+ +. .++++.|+||..+++|.|.||++++++++++.+........
T Consensus 163 ~~~g~~~~~~~~-~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 239 (393)
T 1mdo_A 163 HATGTSYKGRHI-GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPG 239 (393)
T ss_dssp TCTTCEETTEET-TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCC
T ss_pred cccCCeECCeec-CC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccC
Confidence 93 1 111111 11 78999999933333456899999975688888876543211
Q ss_pred --CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEe
Q 024997 124 --MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVK 201 (259)
Q Consensus 124 --~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (259)
...+++...++...++ .+++..++.+++++.+.+.|++++ +.+...++ ...+.++.++|+.
T Consensus 240 ~~~~~~~~~~a~~~~~l~---------~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~-------~~~~~~~~~~~v~ 302 (393)
T 1mdo_A 240 YKYNLPDLNAAIALAQLQ---------KLDALNARRAAIAAQYHQAMADLP-FQPLSLPS-------WEHIHAWHLFIIR 302 (393)
T ss_dssp CBCCCCHHHHHHHHHHHH---------THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCS-------SCEECCCSCEEEE
T ss_pred ccCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCC-------CCCCceeEEEEEE
Confidence 1234554444444443 244556666677788888887654 22110000 0012355678888
Q ss_pred cCC----CchHHHHHHHHHcCeeeecCCccc---------------C-----CCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 202 CER----EEDKDCYGILKAAKIIGREGKKFR---------------A-----EARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 202 ~~~----~~~~~~~~ll~~~gi~~~~g~~f~---------------~-----~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
++. .+.+.+.+.|.++||.+++|..+. + ..+.+|+++.. ++++++.+++.|+++
T Consensus 303 ~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 303 VDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp CCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 873 345556666667899999986441 0 13579999974 999999999999988
Q ss_pred hh
Q 024997 256 IS 257 (259)
Q Consensus 256 l~ 257 (259)
++
T Consensus 383 ~~ 384 (393)
T 1mdo_A 383 AG 384 (393)
T ss_dssp HC
T ss_pred Hh
Confidence 75
No 174
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.82 E-value=3.7e-20 Score=162.99 Aligned_cols=209 Identities=9% Similarity=0.031 Sum_probs=136.2
Q ss_pred ChhhhcccCC---CCceEEEEcCCC-CCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEE
Q 024997 24 EANLWGNASS---DTHLVEFVTAPN-NPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMI 87 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~-NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~ 87 (259)
|+++|++.+. +++++|+++.++ ||+|.+. .++|+++|+++|+||+| |+....... ...+....+
T Consensus 196 d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di 275 (448)
T 3dod_A 196 CLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDL 275 (448)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE
T ss_pred HHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCE
Confidence 3677888775 456665555555 8888654 38999999999999999 421111111 111111224
Q ss_pred eccccccCCCc-ceEEEEEecCHHHHHHHHH-------hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 024997 88 FTISKLTGHAG-SRFGWAVIKDEAVYQRMSA-------YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKK 159 (259)
Q Consensus 88 ~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (259)
.||||.++ .| +|+||++++ +++++.+.. .....+++.+++.|+++.++++... .++ ..+++++
T Consensus 276 ~t~sK~l~-~G~~~ig~v~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~~~----~~~~~~~ 346 (448)
T 3dod_A 276 MAAGKGIT-GGYLPIAVTFAT-EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFE---SEN----IVEQVAE 346 (448)
T ss_dssp EEECGGGG-TTSSCCEEEEEE-HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHH---HTT----HHHHHHH
T ss_pred EEeccccc-CCcCceEEEEEC-HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHh---ccc----HHHHHHH
Confidence 58999998 59 599999999 799998876 4445678889999999999988531 123 3455555
Q ss_pred HHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c-----------hHHHHHHHHHcCeeeecCCcc
Q 024997 160 RWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E-----------DKDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~ll~~~gi~~~~g~~f 227 (259)
+.+.+.+.|+++.... .+....+ .|.++|+.+... + ...+...+.++||.++|+
T Consensus 347 ~~~~~~~~l~~l~~~~----------~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--- 412 (448)
T 3dod_A 347 KSKKLHFLLQDLHALP----------HVGDIRQ-LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL--- 412 (448)
T ss_dssp HHHHHHHHHHHHTTST----------TEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE---
T ss_pred HHHHHHHHHHHHhcCC----------CeEEEEe-eeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc---
Confidence 5666666555422110 0222222 355667776542 1 133444455679999985
Q ss_pred cCCCCeEEEEe--ecChhhHHHHHHHHHHHhhh
Q 024997 228 RAEARFVRLSL--LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 228 ~~~~~~~Ris~--~~~~~~~~~~~~~l~~~l~~ 258 (259)
+ +++||++ ..+++++++++++|++++++
T Consensus 413 --~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 413 --G-DVIAFLPPLASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp --T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 7999965 44999999999999988753
No 175
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.82 E-value=4.8e-19 Score=154.92 Aligned_cols=242 Identities=10% Similarity=0.025 Sum_probs=148.9
Q ss_pred CCCcccchh----hhhhccCccccccc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc
Q 024997 1 MPFYPLYQE----QTDYFESVDYKFEG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF 70 (259)
Q Consensus 1 ~P~y~~~~~----~~~~~g~~~~~~~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~ 70 (259)
+|+|+.+.. .+...|.++..+.. |+++|++.+++++++|++++|+||||.++ .++|+++|+++|+|++|-
T Consensus 128 ~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 128 DRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp TTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTS
T ss_pred CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 467776666 44556766543332 77889999999999999999999999997 389999999999999993
Q ss_pred CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEe--cCH------------------HHHHHHHH-hhhhhcCCCCHH
Q 024997 71 WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVI--KDE------------------AVYQRMSA-YISLNTMGVSRE 129 (259)
Q Consensus 71 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~--~~~------------------~~~~~~~~-~~~~~~~~~~~~ 129 (259)
.+.. .-+...+.++++.|+||.++.+|..+|.+++ .+. .+++..+. .........++.
T Consensus 208 ~~~~-~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~ 286 (430)
T 3ri6_A 208 PPYL-LEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPH 286 (430)
T ss_dssp CTTT-CCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHH
T ss_pred cccc-CChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHH
Confidence 1111 1111234579999999999877655655554 211 11233322 223344455665
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc----cceeeCCCCCeeEEEecCCC
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT----YFKKIRPPSPAYAWVKCERE 205 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 205 (259)
..+.+...++ .+..+.++..++...+.+.|++.+.+.....+....+ .++.....||+.+|+.++.
T Consensus 287 ~a~l~l~~l~---------~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~- 356 (430)
T 3ri6_A 287 NAYLQSLGLE---------TMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES- 356 (430)
T ss_dssp HHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-
T ss_pred HHHHHHhhhh---------hHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-
Confidence 5544444444 4566677888999999999998776442222220000 0000002255588999973
Q ss_pred chHHHHHHHH---HcCeeeecCCccc----------------------CCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 206 EDKDCYGILK---AAKIIGREGKKFR----------------------AEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~~~~~~~ll~---~~gi~~~~g~~f~----------------------~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
.+...++++ ..++.+.+|..+. ..++.+|||++. |+.+++++.|++.|
T Consensus 357 -~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 357 -KEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp -HHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 333444443 3456666665443 236789999987 44445555555544
No 176
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.81 E-value=6.6e-19 Score=155.42 Aligned_cols=207 Identities=11% Similarity=0.046 Sum_probs=144.5
Q ss_pred cChhhhcccCC---CCceEEEEcC-CCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCC
Q 024997 23 GEANLWGNASS---DTHLVEFVTA-PNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADE 83 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~-p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~ 83 (259)
.|+++|++.++ +++++++++. ++||+|.+. .++|+++|+++|+||+| |+.....+. +..+.
T Consensus 218 ~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pd 297 (457)
T 3tfu_A 218 AYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPD 297 (457)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCce
Confidence 36788888885 5678877777 789999875 28999999999999999 432221111 22222
Q ss_pred eEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHh-----hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 024997 84 ELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY-----ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTM 157 (259)
Q Consensus 84 ~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (259)
+ -||||.++ .| +|+||++++ +++++.+... ....+++.+++.++++.+.++... .++ ..+++
T Consensus 298 i---it~sK~l~-gG~~~lG~v~~~-~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~---~~~----~~~~~ 365 (457)
T 3tfu_A 298 I---MCVGKALT-GGYLSLAATLCT-ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL---GQD----WRTRI 365 (457)
T ss_dssp E---EEECGGGG-TTSSCCEEEEEE-HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH---TSC----HHHHH
T ss_pred E---EEEChhhh-CCCcceEEEEEc-HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh---hhH----HHHHH
Confidence 2 29999987 46 799999999 7999988632 334567889999999999888531 122 36677
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-chHHHHHHHHHcCeeeecCCcccCCCCeEEE
Q 024997 158 KKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-EDKDCYGILKAAKIIGREGKKFRAEARFVRL 236 (259)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ri 236 (259)
+++.+++.+.|+++... + .+...++. |.++++.+... +...+.+.|.++||.++|. .+++||
T Consensus 366 ~~~~~~l~~~L~~l~~~-----~-----~v~~vr~~-G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~------~~~lRi 428 (457)
T 3tfu_A 366 TELAAGLTAGLDTARAL-----P-----AVTDVRVC-GAIGVIECDRPVDLAVATPAALDRGVWLRPF------RNLVYA 428 (457)
T ss_dssp HHHHHHHHHHHGGGGGS-----T-----TEEEEEEC-SSCEEEEESSCCCHHHHHHHHHHTTEECCCB------TTEEEE
T ss_pred HHHHHHHHHHHHHHhcC-----C-----CeeeeecC-CeEEEEEECCcccHHHHHHHHHHCCeEEEec------CCEEEE
Confidence 77888888888765321 1 13333333 56677777653 3344444455679999972 268999
Q ss_pred Eee--cChhhHHHHHHHHHHHhhh
Q 024997 237 SLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 237 s~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
++. .+++++++++++|++++++
T Consensus 429 ~p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 429 MPPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHH
Confidence 864 4999999999999998864
No 177
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.81 E-value=3.1e-20 Score=158.05 Aligned_cols=227 Identities=11% Similarity=-0.026 Sum_probs=150.5
Q ss_pred CCCcccchh--hhhhccCcc-----cccccChhhhcccCCCC-------ceEEEEcCCCCCChhhH--------HHhhcC
Q 024997 1 MPFYPLYQE--QTDYFESVD-----YKFEGEANLWGNASSDT-------HLVEFVTAPNNPDGQMN--------KAVLKG 58 (259)
Q Consensus 1 ~P~y~~~~~--~~~~~g~~~-----~~~~~d~~~l~~~~~~~-------~~~i~i~~p~NPtG~~~--------~~la~~ 58 (259)
+|+|+.+.. .++..|.++ ..+.+|+++|++.+++. ++++++++| ||||.++ .++|++
T Consensus 97 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~ 175 (359)
T 1svv_A 97 QLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKE 175 (359)
T ss_dssp TTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHH
Confidence 478888877 366667655 24567889999888543 889999999 7999985 288999
Q ss_pred CCcEEEeeccc--cC-CCCCCCCCC-----CCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhc--CCCCH
Q 024997 59 PYAKSIYDHAY--FW-PHFAPIPAP-----ADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT--MGVSR 128 (259)
Q Consensus 59 ~~~~vi~De~y--~~-~~~~~~~~~-----~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~--~~~~~ 128 (259)
+|+++|+||+| |. ... ..... ....++..|++|..+. ..+|+++++ +++++.+........ ...+.
T Consensus 176 ~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~d~~~~s~~K~g~~--~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T 1svv_A 176 HGLYLFLDGARLASALSSP-VNDLTLADIARLTDMFYIGATKAGGM--FGEALIILN-DALKPNARHLIKQRGALMAKGW 251 (359)
T ss_dssp HTCEEEEECTTHHHHHTST-TCCCCHHHHHHHCSEEEEECTTTTCS--SCEEEEECS-GGGCTTHHHHHHHTTCCCTTTH
T ss_pred hCCEEEEEccchhhhhcCC-CcchhhhhhhhcCCEEEEecccCCCC--CceEEEEEc-ccHHHHHHHHHhcCCcccccch
Confidence 99999999998 31 111 11111 2346788899997543 458999988 588877766432111 12222
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchH
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDK 208 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
.......++++ . ...++.+++++++++.+.+.| +..+ +....+.+++++|++++ .+
T Consensus 252 ~~~~~~~~~l~------~-~~~~~~~~~~~~~~~~l~~~L-~~~~-------------~~~~~~~~~~~~~~~~~---~~ 307 (359)
T 1svv_A 252 LLGIQFEVLMK------D-NLFFELGAHSNKMAAILKAGL-EACG-------------IRLAWPSASNQLFPILE---NT 307 (359)
T ss_dssp HHHHHHHHHTS------T-THHHHHHHHHHHHHHHHHHHH-HHTT-------------CCBSSCCSSSEECBEEE---HH
T ss_pred hhHHHHHHHHh------h-hhHHHHHHHHHHHHHHHHHHh-ccCC-------------eEEccCCccceEEEEcC---HH
Confidence 22222333343 1 345677888999999999988 4443 33345677888888774 45
Q ss_pred HHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 209 DCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 209 ~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+...+++++||.+.+ .. ..+.+++|++++. +++++++++++|++++++
T Consensus 308 ~~~~l~~~~gi~v~~-~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 308 MIAELNNDFDMYTVE-PL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp HHHHHTTTEECEEEE-EE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHhcCEEEEe-cc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 555555544999822 11 1245789998763 899999999999988753
No 178
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.81 E-value=1.9e-18 Score=150.91 Aligned_cols=228 Identities=11% Similarity=0.004 Sum_probs=146.9
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. ++.+|+++|++.+++++++|+++ ||||... .++|+++|+++|+|++
T Consensus 97 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea 173 (424)
T 2po3_A 97 SMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAA 173 (424)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 5899999998888887652 45678899999998888987875 4899875 3899999999999999
Q ss_pred cc-CC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcC------------CCCHHHHHH
Q 024997 69 YF-WP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTM------------GVSRECQLR 133 (259)
Q Consensus 69 y~-~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~------------~~~~~~q~~ 133 (259)
|. +- ....+.... .++++||||..+++|+|+||++++++++++.+......... ..+.+.
T Consensus 174 ~~~g~~~~~~~~~~~~--di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 248 (424)
T 2po3_A 174 HALGCAVDGRPAGSLG--DAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAA--- 248 (424)
T ss_dssp TCTTCEETTEETTSSS--SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHH---
T ss_pred cccCCeECCeeccccc--CEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHH---
Confidence 92 11 111221112 39999999666667799999999856888888775542211 122332
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-CCCC---eeE-EEecCC----
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-PPSP---AYA-WVKCER---- 204 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~-~~~~~~---- 204 (259)
+...+.. ...+++..++.+++++.+.+.|+++++ +.... ++++ +++ ++.++.
T Consensus 249 aa~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~~~~~~~~~i~~~~~~~~ 309 (424)
T 2po3_A 249 AAMGLTS------LDAFPEVIDRNRRNHAAYREHLADLPG-------------VLVADHDRHGLNNHQYVIVEIDEATTG 309 (424)
T ss_dssp HHHHHHH------HHHHHHHHHHHHHHHHHHHHHTCSCTT-------------EEECCGGGGSCCCCCCEEEEECHHHHS
T ss_pred HHHHHHH------HHHHHHHHHHHHHHHHHHHHHhccCCC-------------ccccCCCCCCccccEEEEEEECCccch
Confidence 2222221 123445566666666666666665433 22222 2222 233 366652
Q ss_pred CchHHHHHHHHHcCeeeecCCcccCC---------------CCe-------EEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKKFRAE---------------ARF-------VRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~f~~~---------------~~~-------~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.+.+.+.+.|.++||.+++. |..+ ++. +|+++.. +++++++++++|+++++
T Consensus 310 ~~~~~l~~~L~~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~ 384 (424)
T 2po3_A 310 IHRDLVMEVLKAEGVHTRAY--FSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp SCHHHHHHHHHHTTEECBCT--TCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCceecc--cCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHh
Confidence 34556666777899999872 2210 122 6666323 89999999999998765
No 179
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.81 E-value=8.8e-19 Score=154.19 Aligned_cols=216 Identities=11% Similarity=0.021 Sum_probs=150.9
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CCCCCCCCCCCCCeEEEeccc
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WPHFAPIPAPADEELMIFTIS 91 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~~~~~~~~~~~~~i~~~S~S 91 (259)
+.+|+++|++.+. .+++++++++|+||++.-+ .++|+++|+++|+||+|+ ....... .....+++.|+|
T Consensus 170 ~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~--~~~~di~~~s~s 247 (447)
T 3h7f_A 170 HLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP--VPHADVVSTTVH 247 (447)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS--TTTCSEEEEESS
T ss_pred CCcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC--CCCCcEEEecCC
Confidence 5688999998884 4788988999999999766 388999999999999972 1111111 123358899999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCC-CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh
Q 024997 92 KLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGV-SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL 170 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (259)
|.++ |+|.||++++ +++++.+.........+. +...+.++..++... .+..+.+.++++.++++.+.+.|++
T Consensus 248 K~l~--G~~gG~i~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (447)
T 3h7f_A 248 KTLG--GGRSGLIVGK-QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIA----ATPEFADRQRRTLSGARIIADRLMA 320 (447)
T ss_dssp GGGC--CCSCEEEEEC-GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT----TSHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cCCC--CCCeEEEEEC-HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9984 8899999999 589888877654443333 334355555555531 3335677888999999999999886
Q ss_pred c----CCCccccccccccccceee-CCCCCeeEEEecCCC--chHHHHHHHHHcCeeee----cCCcccC-CCCeEEEEe
Q 024997 171 S----NRFSLQEIAPQYCTYFKKI-RPPSPAYAWVKCERE--EDKDCYGILKAAKIIGR----EGKKFRA-EARFVRLSL 238 (259)
Q Consensus 171 ~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~----~g~~f~~-~~~~~Ris~ 238 (259)
. .+ +... .+..+.++|+++... +.+.+.++|+++||.++ |+..+++ .++++||+.
T Consensus 321 ~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~ 387 (447)
T 3h7f_A 321 PDVAKAG-------------VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGT 387 (447)
T ss_dssp HHHHHTT-------------CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEEC
T ss_pred ccccCCC-------------eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccC
Confidence 5 11 2222 234567788887543 56778888988899998 6543332 357899997
Q ss_pred e------cChhhHHHHHHHHHHHhhh
Q 024997 239 L------KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~------~~~~~~~~~~~~l~~~l~~ 258 (259)
. .++++++++++.|.+++++
T Consensus 388 ~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 388 PALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 3 3679999999999988764
No 180
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.81 E-value=7.7e-20 Score=159.85 Aligned_cols=211 Identities=11% Similarity=-0.013 Sum_probs=137.3
Q ss_pred ChhhhcccCCC---CceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccccC-CCCCCCC-CCCCCeEEEec
Q 024997 24 EANLWGNASSD---THLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAYFW-PHFAPIP-APADEELMIFT 89 (259)
Q Consensus 24 d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y~~-~~~~~~~-~~~~~~i~~~S 89 (259)
|+++|++.+++ ++++++++.++|++|.+. .++|+++|+++|+||+|-+ ....... ...+....+.|
T Consensus 185 d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t 264 (427)
T 3fq8_A 185 DLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLTT 264 (427)
T ss_dssp CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChhh
Confidence 78888888743 567756655567777655 3899999999999999921 1110010 11111122579
Q ss_pred cccccCCCcceEEEEEecCHHHHHHHHHh---hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH
Q 024997 90 ISKLTGHAGSRFGWAVIKDEAVYQRMSAY---ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSK 166 (259)
Q Consensus 90 ~SK~~g~~G~R~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (259)
+||.++ +|+|+||++++ +++++.+... ....+++.+++.++++.++++.. ..++ ..++++++.+.+.+
T Consensus 265 ~sK~~~-~G~~~G~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~---~~~~----~~~~~~~~~~~~~~ 335 (427)
T 3fq8_A 265 LGKIIG-GGLPVGAYGGK-REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELL---RQPG----TYEYLDQITKRLSD 335 (427)
T ss_dssp ECGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHH---TSTT----HHHHHHHHHHHHHH
T ss_pred hhhhhh-CCcceEEEEEc-HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHH---HhcC----HHHHHHHHHHHHHH
Confidence 999999 89999999998 7999887653 23345678999999999888753 1223 35556666666666
Q ss_pred HHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc--------------hHHHHHHHHHcCeeeecCCcccCCCC
Q 024997 167 IISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE--------------DKDCYGILKAAKIIGREGKKFRAEAR 232 (259)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~ll~~~gi~~~~g~~f~~~~~ 232 (259)
.|+++.. .+. +....+..|.++|+.+.... ...+.+.+.++||.++|+.. .
T Consensus 336 ~l~~~~~----~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~-----~ 400 (427)
T 3fq8_A 336 GLLAIAQ----ETG------HAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF-----E 400 (427)
T ss_dssp HHHHHHH----HTT------CCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT-----S
T ss_pred HHHHHHH----hCC------CCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC-----C
Confidence 6654321 000 11112334667777765421 12344455578999998542 3
Q ss_pred eEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 233 FVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 233 ~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+|+++..+++++++++++|++++++
T Consensus 401 r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 401 AGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 56666666999999999999998864
No 181
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.80 E-value=7.4e-20 Score=161.74 Aligned_cols=232 Identities=11% Similarity=-0.015 Sum_probs=155.9
Q ss_pred CCCcccch----hhhhhccCcc-----------cccccChhhhcccCC---CCceEEEEcCCCCCChhhH-----HHhhc
Q 024997 1 MPFYPLYQ----EQTDYFESVD-----------YKFEGEANLWGNASS---DTHLVEFVTAPNNPDGQMN-----KAVLK 57 (259)
Q Consensus 1 ~P~y~~~~----~~~~~~g~~~-----------~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-----~~la~ 57 (259)
+|+|+... ..++..|..+ ..+.+|+++|++.+. ++++++++++||||||.++ .++|+
T Consensus 162 ~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~ 241 (465)
T 3e9k_A 162 AKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQ 241 (465)
T ss_dssp TTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHH
T ss_pred CCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHH
Confidence 46777633 3555566553 235678999999984 6889999999999999998 38999
Q ss_pred CCCcEEEeeccccCCCCCCCC-CCCCCeEEEeccccccC-CCcceEEEEEecCHHHHHHHHHhhhh--------------
Q 024997 58 GPYAKSIYDHAYFWPHFAPIP-APADEELMIFTISKLTG-HAGSRFGWAVIKDEAVYQRMSAYISL-------------- 121 (259)
Q Consensus 58 ~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~~~~~~~~~-------------- 121 (259)
++|+++|+|+++..+ ..++. ...+.+++++|++|.++ .+| ++|+++++ +++.+.+......
T Consensus 242 ~~g~~vi~D~a~~~g-~~~~~~~~~~~D~~~~s~~K~l~~gp~-~~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~ 318 (465)
T 3e9k_A 242 AKGCYVGFDLAHAVG-NVELYLHDWGVDFACWCSYKYLNAGAG-GIAGAFIH-EKHAHTIKPALVGWFGHELSTRFKMDN 318 (465)
T ss_dssp HTTCEEEEECTTTTT-TSCCCHHHHTCCEEEECSSSTTCCCTT-CCCEEEEC-GGGTTTSCCSSCCGGGBCHHHHTTCCS
T ss_pred HcCCEEEEEhhhhcC-CcCCchhhcCCCEEEECcccccccCCC-ceEEEEEc-HHHHhhcCCcccCccCCCCCcccccCC
Confidence 999999999988311 11121 12346789999999993 344 68999998 5776654321100
Q ss_pred -----------hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhc----------CCCcccccc
Q 024997 122 -----------NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLS----------NRFSLQEIA 180 (259)
Q Consensus 122 -----------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~ 180 (259)
....++.+...+..++++.. .+..+++.+++++++++.+.+.|+++ ++
T Consensus 319 ~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g------- 387 (465)
T 3e9k_A 319 KLQLIPGVCGFRISNPPILLVCSLHASLEIF----KQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPV------- 387 (465)
T ss_dssp CCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHHHHCC---------C-------
T ss_pred CcCcCCChHHhccCCccHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCC-------
Confidence 00134445455555555532 11126778888999999999998874 22
Q ss_pred ccccccceeeCCC----CCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccCCCCeEEEEee-c--ChhhHHHHHHHHH
Q 024997 181 PQYCTYFKKIRPP----SPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL-K--SQDDFDLLLHRLD 253 (259)
Q Consensus 181 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~-~--~~~~~~~~~~~l~ 253 (259)
+....|. .|.++++.++. +...+.+.|.++||.++. .+++++|+|++ . +.++++++++.|+
T Consensus 388 ------~~~~~p~~~~~~g~~~~~~~~~-~~~~l~~~L~~~Gi~v~~-----~~~~~iRis~~~~~~t~edi~~~~~~l~ 455 (465)
T 3e9k_A 388 ------VNIITPSHVEERGCQLTITFSV-PNKDVFQELEKRGVVCDK-----RNPNGIRVAPVPLYNSFHDVYKFTNLLT 455 (465)
T ss_dssp ------EEECSCSSGGGBCSCEEEEECC-TTCCHHHHHHTTTEECEE-----ETTTEEEEBCCTTTCCHHHHHHHHHHHH
T ss_pred ------eEEeCCCCHhhcccEEEEEecC-CHHHHHHHHHHCCEEEec-----CCCCEEEEeCcccCCCHHHHHHHHHHHH
Confidence 3333443 36677887763 333444455567999873 23589999983 2 8999999999999
Q ss_pred HHhhh
Q 024997 254 ELISK 258 (259)
Q Consensus 254 ~~l~~ 258 (259)
+++++
T Consensus 456 ~~l~~ 460 (465)
T 3e9k_A 456 SILDS 460 (465)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 98864
No 182
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.80 E-value=1.9e-18 Score=153.54 Aligned_cols=213 Identities=14% Similarity=0.039 Sum_probs=149.2
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecccc------CCCCCCCCCCCCCeEEEe
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAYF------WPHFAPIPAPADEELMIF 88 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y~------~~~~~~~~~~~~~~i~~~ 88 (259)
+.+|+++|++.++ +++++|++ +++||+ .++ .++|+++|+++|+|++|+ +....+++ ..++++.
T Consensus 178 ~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~---~~div~~ 252 (483)
T 1rv3_A 178 GYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE---HCHVVTT 252 (483)
T ss_dssp CSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG---TCSEEEE
T ss_pred CcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC---CCcEEEe
Confidence 5688999999997 78999888 999998 655 389999999999999983 11111121 3468999
Q ss_pred ccccccCCCcceEEEEEecCH--------------HHHHHHHHhhhhhcCC-CCHHHHHHHHHHHHHHHhcCCcchHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDE--------------AVYQRMSAYISLNTMG-VSRECQLRAFKLLKVVLEDGGNNIFEFG 153 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 153 (259)
|+||.+ .|+|.||++++++ ++.+.+.........+ ++.....+...+++.. ....+++.
T Consensus 253 s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~----~~~~~~~~ 326 (483)
T 1rv3_A 253 TTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA----MTPEFKEY 326 (483)
T ss_dssp ESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH----TSHHHHHH
T ss_pred cCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH----hChhHHHH
Confidence 999987 5888899999852 2344443322222233 3334444445556542 23356778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCC-CCeeEEEecCC--CchHHHHHHHHHcCeeee----cCCc
Q 024997 154 YNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPP-SPAYAWVKCER--EEDKDCYGILKAAKIIGR----EGKK 226 (259)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ll~~~gi~~~----~g~~ 226 (259)
.+++.++++.+.+.|++++ +....+. ...++|+++.. .+.+.+.+.|++.||.+. ||..
T Consensus 327 ~~~~~~~~~~l~~~L~~~g--------------~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~ 392 (483)
T 1rv3_A 327 QRQVVANCRALSAALVELG--------------YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDK 392 (483)
T ss_dssp HHHHHHHHHHHHHHHHHTT--------------CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCS
T ss_pred HHHHHHHHHHHHHHHHhcC--------------CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCC
Confidence 8899999999999998763 2222332 34577888864 245667788888999999 8875
Q ss_pred ccCCCCeEEEEeec--C----hhhHHHHHHHHHHHhhh
Q 024997 227 FRAEARFVRLSLLK--S----QDDFDLLLHRLDELISK 258 (259)
Q Consensus 227 f~~~~~~~Ris~~~--~----~~~~~~~~~~l~~~l~~ 258 (259)
+..+++++|||++. + ++++++++++|.++++.
T Consensus 393 ~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 393 SALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 33346899999965 4 79999999999988753
No 183
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.80 E-value=2.2e-19 Score=157.13 Aligned_cols=209 Identities=12% Similarity=0.054 Sum_probs=136.1
Q ss_pred ChhhhcccCC---CCceEEEEcCCCCCChhhH----------HHhhcCCCcEEEeeccc--cCCCCCCCC-CCCCCeEEE
Q 024997 24 EANLWGNASS---DTHLVEFVTAPNNPDGQMN----------KAVLKGPYAKSIYDHAY--FWPHFAPIP-APADEELMI 87 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~----------~~la~~~~~~vi~De~y--~~~~~~~~~-~~~~~~i~~ 87 (259)
|+++|++.+. +++++ ++++|+||+|.++ .++|+++|+++|+||+| | ....... ...+....+
T Consensus 186 d~~~le~~l~~~~~~~~~-vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi 263 (429)
T 4e77_A 186 DLASVRQAFEQYPQEVAC-IIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDL 263 (429)
T ss_dssp CHHHHHHHHHHSTTTEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSE
T ss_pred CHHHHHHHHHhcCCCEEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCe
Confidence 7788888874 34455 7788887776553 38899999999999999 3 1111110 111111114
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHh---hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAY---ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
.|+||.++ +|+|+||++++ +++++.+... ....+++.+++.+.++.+.++.. ..+++ .++++++.+.+
T Consensus 264 ~t~sK~~~-~G~~~G~~~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~~~~~----~~~~~~~~~~l 334 (429)
T 4e77_A 264 TCLGKIIG-GGMPVGAFGGR-REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEI---SQVGV----YETLTELTDSL 334 (429)
T ss_dssp EEEEGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHH---TSTTH----HHHHHHHHHHH
T ss_pred eeeccccc-CCCCeEEEEEC-HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHH---HhcCH----HHHHHHHHHHH
Confidence 59999998 89999999998 7998887653 23456788999999999988854 12333 45555666666
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc---------------hHHHHHHHHHcCeeeecCCcccC
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE---------------DKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
.+.|+++.. .++ +....+..|.++|+.+...+ ...+.+.|.++||.++|+.
T Consensus 335 ~~~L~~~~~----~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---- 400 (429)
T 4e77_A 335 ATGLRHAAK----EEN------IPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA---- 400 (429)
T ss_dssp HHHHHHHHH----HTT------CCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST----
T ss_pred HHHHHHHHH----hCC------CceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC----
Confidence 665554310 000 11112335677788776531 1334444556799999853
Q ss_pred CCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...+|+++..+++++++++++|++++++
T Consensus 401 -~~~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 401 -FEAGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp -TSCEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred -CCCEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 2456777766999999999999998864
No 184
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.80 E-value=7.4e-19 Score=150.69 Aligned_cols=231 Identities=9% Similarity=0.033 Sum_probs=151.0
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++++ |+||||.+. .++|+++|+++|+|++|
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~ 161 (374)
T 3uwc_A 85 ANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQ 161 (374)
T ss_dssp SSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCC
Confidence 4889999888888887652 356789999999988888855 999999976 38999999999999998
Q ss_pred c-CCCCCCCCCCCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhhhh------------hcCCCCHHHHHHH
Q 024997 70 F-WPHFAPIPAPADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYISL------------NTMGVSRECQLRA 134 (259)
Q Consensus 70 ~-~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~------------~~~~~~~~~q~~~ 134 (259)
- +..+..-.-..-.++++.|+| |.++.+|. .|+++++++++.+.+...... .....+.....+.
T Consensus 162 ~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
T 3uwc_A 162 TILGRINDKFVGSWGQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIA 240 (374)
T ss_dssp CTTCEETTEETTSSSSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHH
T ss_pred ccCceeCCeeccccccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHH
Confidence 2 111100000111267788866 99985565 899998766788877765421 1122344433322
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC-CccccccccccccceeeCCCC---Ce-eEEEecCCCchHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR-FSLQEIAPQYCTYFKKIRPPS---PA-YAWVKCEREEDKD 209 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~ 209 (259)
...+ ..+++..++.+++.+.+.+.|+++++ +.+.. .+.+ .+ .+.+... +.+.
T Consensus 241 ~~~~---------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~ 297 (374)
T 3uwc_A 241 NRLM---------NQLETITEKRRGIAHLYDQSFVDLSEFIDVPV------------RREGVYHVFHIYVLRVK--YRDQ 297 (374)
T ss_dssp HHHG---------GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCC------------CCTTEECCCSSEEEEET--THHH
T ss_pred HHHH---------HHHHHHHHHHHHHHHHHHHHhccCCCeEEecc------------CCCCCceeeEEEEEEcC--CHHH
Confidence 2222 23455677777788888888877653 32211 1111 11 1222222 4556
Q ss_pred HHHHHHHcCeeeecCCccc----C------------------CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 210 CYGILKAAKIIGREGKKFR----A------------------EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f~----~------------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.|.++||.++++.... + ..+.+|+++.. ++++++++++.|++++++
T Consensus 298 l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 298 LFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 6667778899999875111 0 02679999865 899999999999999875
No 185
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.79 E-value=7.8e-20 Score=160.00 Aligned_cols=209 Identities=13% Similarity=0.041 Sum_probs=139.0
Q ss_pred ChhhhcccCC---CCceEEEEcCCCC-CChhhH---------HHhhcCCCcEEEeeccccC-CCCCCCC-CCCCCeEEEe
Q 024997 24 EANLWGNASS---DTHLVEFVTAPNN-PDGQMN---------KAVLKGPYAKSIYDHAYFW-PHFAPIP-APADEELMIF 88 (259)
Q Consensus 24 d~~~l~~~~~---~~~~~i~i~~p~N-PtG~~~---------~~la~~~~~~vi~De~y~~-~~~~~~~-~~~~~~i~~~ 88 (259)
|+++|++.+. +++++ ++++|+| ++|.+. .++|+++|+++|+||+|.+ ....... ...+....+.
T Consensus 186 d~~~le~~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~ 264 (429)
T 3k28_A 186 DLESVKYAFEQFGDDIAC-VIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLT 264 (429)
T ss_dssp CHHHHHHHHHHHGGGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE
T ss_pred CHHHHHHHHHhCCCCEEE-EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCcee
Confidence 7788888774 34555 5556654 555543 3899999999999999931 1111100 0111122246
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHHhh---hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSAYI---SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
|+||.++ .|+|+||++++ +++++.+.... ...+++.+++.|.++.++++. .+ ++.+++++++++.+.
T Consensus 265 t~sK~~~-~G~~iG~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~-----~~---~~~~~~~~~~~~~l~ 334 (429)
T 3k28_A 265 CLGKVIG-GGLPVGAYGGK-AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQ-----LT---PESYVEFERKAEMLE 334 (429)
T ss_dssp EECGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHT-----CC---HHHHHHHHHHHHHHH
T ss_pred hhhhhhc-CCCCeEEEEEc-HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHH-----HH---HHHHHHHHHHHHHHH
Confidence 8999998 69999999999 79988876532 334678899999999999984 22 567788888888888
Q ss_pred HHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc--------------hHHHHHHHHHcCeeeecCCcccCCC
Q 024997 166 KIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE--------------DKDCYGILKAAKIIGREGKKFRAEA 231 (259)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~ll~~~gi~~~~g~~f~~~~ 231 (259)
+.|+++.. .++ .+...++ .|.++++.+.... .+.+.+.|.++||.++|+ +.
T Consensus 335 ~~L~~~~~----~~~-----~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-----~~ 399 (429)
T 3k28_A 335 AGLRKAAE----KHG-----IPHHINR-AGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPS-----QF 399 (429)
T ss_dssp HHHHHHHH----HTT-----CCCEEEE-ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSS-----TT
T ss_pred HHHHHHHh----hCC-----CCEEEEe-eccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecC-----CC
Confidence 88876421 000 0112233 3445555543211 133444455789999985 24
Q ss_pred CeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 232 RFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 232 ~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+.+|+++..+++++++++++|++++++
T Consensus 400 ~~~r~~~~~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 400 EGLFLSTVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp SCBCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 678998877999999999999998864
No 186
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.79 E-value=1.7e-18 Score=152.36 Aligned_cols=203 Identities=12% Similarity=0.100 Sum_probs=140.0
Q ss_pred hhhhcccCC----CCceEEEEcCCC-CCChhhH---------HHhhcCCCcEEEeeccc--cCCCCC--CCC--CCCCCe
Q 024997 25 ANLWGNASS----DTHLVEFVTAPN-NPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFA--PIP--APADEE 84 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p~-NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~--~~~--~~~~~~ 84 (259)
+++|++.++ +++++ ++++|+ ||||.+. .++|+++|+++|+||+| |+.... .+. +....
T Consensus 205 ~~~le~~l~~~~~~~~~~-vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d- 282 (449)
T 3a8u_X 205 ADELLKLIELHDASNIAA-VFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPD- 282 (449)
T ss_dssp HHHHHHHHHHHCGGGEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS-
T ss_pred HHHHHHHHHhcCCCCEEE-EEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCC-
Confidence 778888874 34556 666775 6799743 28999999999999999 432111 111 22222
Q ss_pred EEEeccccccCCCc-ceEEEEEecCHHHHHHHHHh---------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 024997 85 LMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY---------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGY 154 (259)
Q Consensus 85 i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 154 (259)
+.|+||.++ .| +|+||++++ +++++.+... ....+.+.+++.+.++.++++...+ +...
T Consensus 283 --i~s~sK~l~-~G~~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-------~~~~ 351 (449)
T 3a8u_X 283 --LMCIAKQVT-NGAIPMGAVIAS-TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-------ENLV 351 (449)
T ss_dssp --EEEECGGGG-TTSSCCEEEEEE-HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-------TTHH
T ss_pred --EEEEccccc-CCCCceEEEEEC-HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-------cCHH
Confidence 239999998 58 999999999 6999988764 1234567889999988888875311 1246
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc--h-----HHHHHHHHHcCeeeecCCcc
Q 024997 155 NTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE--D-----KDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~ll~~~gi~~~~g~~f 227 (259)
++++++.+.+.+.|++++.+.. +.... ..|.++|++++... . ++...++ ++||.++|+
T Consensus 352 ~~~~~~~~~l~~~L~~l~~~~~----------~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~--- 416 (449)
T 3a8u_X 352 QSVAEVAPHFEKALHGIKGAKN----------VIDIR-NFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFG--- 416 (449)
T ss_dssp HHHHHHHHHHHHHHHTTTTSTT----------EEEEE-EETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEE---
T ss_pred HHHHHHHHHHHHHHHHHhcCCC----------eEEEe-eeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecC---
Confidence 7788888888888876432110 22222 34678888886431 1 3444444 679999996
Q ss_pred cCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 228 RAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 228 ~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
+ +++||++. .+++++++++++|++++++
T Consensus 417 --g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 417 --G-DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp --T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --C-CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 2 78999954 4999999999999998764
No 187
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.79 E-value=2.4e-18 Score=152.45 Aligned_cols=206 Identities=13% Similarity=0.041 Sum_probs=135.3
Q ss_pred hhhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeE
Q 024997 25 ANLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEEL 85 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i 85 (259)
.++|++.+. +++++|++..++|++|.+. .++|+++|+++|+||+| |+....... +..+.
T Consensus 209 ~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pd-- 286 (472)
T 3hmu_A 209 ARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPH-- 286 (472)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS--
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCc--
Confidence 566777774 3456644444456667654 28999999999999999 422211111 22222
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHH--hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH-HHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA--YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMK-KRWE 162 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~--~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~ 162 (259)
+.+|||.++..|+|+||++++ +++++.+.. .....+++.+++.|+++.++|+... . +...++++ ++.+
T Consensus 287 -i~t~sK~l~gg~~plG~v~~~-~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~---~----~~~~~~~~~~~~~ 357 (472)
T 3hmu_A 287 -IMTIAKGLSSGYAPIGGSIVC-DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILE---E----ENILDHVRNVAAP 357 (472)
T ss_dssp -EEEECGGGTTTSSCCEEEEEE-HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHH---H----TTHHHHHHHTHHH
T ss_pred -eeeechhhhcCCcceEEEEEC-HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHH---H----hHHHHHHHHHHHH
Confidence 347899998555999999999 799998832 1334468889999999999988531 1 12466667 7777
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-c------------hHHHHHHHHHcCeeeecCCcccC
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-E------------DKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
.+.+.|+.+... + .+..+++.+ .++++.+... . ...+.+.|.++||.++|+
T Consensus 358 ~l~~~L~~l~~~-----~-----~v~~vr~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----- 421 (472)
T 3hmu_A 358 YLKEKWEALTDH-----P-----LVGEAKIVG-MMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV----- 421 (472)
T ss_dssp HHHHHHHGGGGS-----T-----TEEEEEEET-TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE-----
T ss_pred HHHHHHHHHhcC-----C-----CeEEEEecC-ceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec-----
Confidence 777777655321 1 133344444 4445555321 0 223444455789999984
Q ss_pred CCCeEEEE--eecChhhHHHHHHHHHHHhhh
Q 024997 230 EARFVRLS--LLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ~~~~~Ris--~~~~~~~~~~~~~~l~~~l~~ 258 (259)
+ +++||+ +..+++++++++++|++++++
T Consensus 422 g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 422 G-DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 899999 445999999999999988753
No 188
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.78 E-value=1.3e-17 Score=142.91 Aligned_cols=228 Identities=10% Similarity=0.000 Sum_probs=152.0
Q ss_pred CCCcccchhhhhhccCccccc------ccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc
Q 024997 1 MPFYPLYQEQTDYFESVDYKF------EGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY 69 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~~------~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y 69 (259)
+|+|+.+...++..|.++..+ .+|+++|++.++++++++++++| ||.+. .++|+++|+++|+|++|
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~ 157 (375)
T 2fnu_A 81 PISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSH 157 (375)
T ss_dssp SSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred CCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 488999998888888765322 46888999999888898888877 89876 38899999999999998
Q ss_pred c-CC--CCCCCCCCCCCeEEEeccc--cccCCCcceEEEEEe-cCHHHHHHHHHhhhhhc----------------CCCC
Q 024997 70 F-WP--HFAPIPAPADEELMIFTIS--KLTGHAGSRFGWAVI-KDEAVYQRMSAYISLNT----------------MGVS 127 (259)
Q Consensus 70 ~-~~--~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~-~~~~~~~~~~~~~~~~~----------------~~~~ 127 (259)
. +. ....+ +..+ .+.+.|+| |.+|. | +|++++ +++++++.+........ .+.+
T Consensus 158 ~~~~~~~~~~~-~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
T 2fnu_A 158 ALGSEYQNKKV-GGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLN 232 (375)
T ss_dssp CTTCEETTEET-TSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCC
T ss_pred ccCCeECCeec-cccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCC
Confidence 2 11 11112 1111 58888999 99975 7 788877 44678888876543211 1333
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-----CCCeeEEEec
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-----PSPAYAWVKC 202 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 202 (259)
.+...++...+ ..+++..++.+++++.+.+.|++++++. ...+ ..++..|+.+
T Consensus 233 ~~~~a~~~~~~---------~~~~~~~~~~~~~~~~l~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~~~ 290 (375)
T 2fnu_A 233 EIQSALGLSQL---------KKAPFLMQKREEAALTYDRIFKDNPYFT-------------PLHPLLKDKSSNHLYPILM 290 (375)
T ss_dssp HHHHHHHHHHH---------TTHHHHHHHHHHHHHHHHHHHTTCSSEE-------------ESGGGCSSCCCCSCEEEEE
T ss_pred HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhhcCCCcc-------------ccCCCCCCCcceEEEEEEe
Confidence 43332222111 2456778888999999999998765422 1121 1234456776
Q ss_pred CCC---chHHHHHHHHHcCeeeecC----C---ccc-------C------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 203 ERE---EDKDCYGILKAAKIIGREG----K---KFR-------A------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 203 ~~~---~~~~~~~ll~~~gi~~~~g----~---~f~-------~------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+.. +.+.+.+.|.++||.++.+ . .|+ . ..+++||+++. +++++++++++|+++++
T Consensus 291 ~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 370 (375)
T 2fnu_A 291 HQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE 370 (375)
T ss_dssp CGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 542 3455556667889999832 1 111 0 12689999975 88999999999998875
Q ss_pred h
Q 024997 258 K 258 (259)
Q Consensus 258 ~ 258 (259)
+
T Consensus 371 ~ 371 (375)
T 2fnu_A 371 S 371 (375)
T ss_dssp H
T ss_pred H
Confidence 3
No 189
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.78 E-value=9.1e-18 Score=144.92 Aligned_cols=232 Identities=12% Similarity=0.010 Sum_probs=150.3
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|++.|++.+++++++++ |+||||.+. .++|+++|+++|+|++
T Consensus 103 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a 179 (391)
T 3dr4_A 103 SLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAA 179 (391)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECc
Confidence 4889999998888887652 356788999999988888855 678999876 3899999999999999
Q ss_pred cc-CCC--CCCCCCCCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhhhhhc--------------CCCCHH
Q 024997 69 YF-WPH--FAPIPAPADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT--------------MGVSRE 129 (259)
Q Consensus 69 y~-~~~--~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 129 (259)
|- +.. ........ .+.+.||| |.++ |.+.|+++++++++.+.+........ ...+.+
T Consensus 180 ~~~g~~~~~~~~~~~~--di~~~S~s~~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l 255 (391)
T 3dr4_A 180 EAVGATYRGKKSGSLG--DCATFSFFGNAIIT--TGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNI 255 (391)
T ss_dssp TCTTCEETTEETTSSS--SEEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHH
T ss_pred ccccceECCeeecccC--CEEEEECCCCCcCC--cCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHH
Confidence 82 111 11111111 47778877 7664 45789999886678887766543211 233444
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccc--cccccccceeeCCCCCeeEEEecCC---
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEI--APQYCTYFKKIRPPSPAYAWVKCER--- 204 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--- 204 (259)
..++....++ .+++..++.+++.+.+.+.|+++ ++.+... ++ ........+++.++.
T Consensus 256 ~aa~~~~~~~---------~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~--------~~~~~~~~~~i~~~~~~~ 317 (391)
T 3dr4_A 256 QAAIGLAQLE---------RVDEHLAARERVVGWYEQKLARL-GNRVTKPHVAL--------TGRHVFWMYTVRLGEGLS 317 (391)
T ss_dssp HHHHHHHHHH---------THHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCT--------TSCCCCSSEEEEECSSCS
T ss_pred HHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCC--------CCcceeEEEEEEECCccc
Confidence 3333222222 34556777788888888888876 3222110 00 001122234566553
Q ss_pred CchHHHHHHHHHcCeeeecCCc---ccC----------------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 205 EEDKDCYGILKAAKIIGREGKK---FRA----------------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 205 ~~~~~~~~ll~~~gi~~~~g~~---f~~----------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.+.+.+.+.|.++||.+++|.. ..+ ..+.+||++.. ++++++++++.|+++++
T Consensus 318 ~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~ 391 (391)
T 3dr4_A 318 TTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVLV 391 (391)
T ss_dssp SCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHhC
Confidence 2455666667788999998751 110 13578999865 89999999999998763
No 190
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.78 E-value=3.3e-18 Score=151.70 Aligned_cols=204 Identities=16% Similarity=0.084 Sum_probs=139.3
Q ss_pred hhhhcccCC----CCceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCC-----CCCCCCCe
Q 024997 25 ANLWGNASS----DTHLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAP-----IPAPADEE 84 (259)
Q Consensus 25 ~~~l~~~~~----~~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~-----~~~~~~~~ 84 (259)
+++|++.+. +++++|+++.++|++|.+. .++|+++|+++|+||+| |+..... ..+..+.
T Consensus 207 ~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pd- 285 (476)
T 3i5t_A 207 VQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPD- 285 (476)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCS-
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcc-
Confidence 567777773 4567766666677888643 38999999999999999 4211111 1121222
Q ss_pred EEEeccccccCCCc-ceEEEEEecCHHHHHHHHHh-------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Q 024997 85 LMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAY-------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNT 156 (259)
Q Consensus 85 i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (259)
+.++||.++ .| +|+|+++++ +++++.+... ....+++.+++.++++.++|+...+ +...++
T Consensus 286 --i~t~sK~l~-~G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~-------~~~~~~ 354 (476)
T 3i5t_A 286 --IITFAKGVT-SGYVPLGGLAIS-EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER-------EGIVDQ 354 (476)
T ss_dssp --EEEECGGGG-TTSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH-------TTHHHH
T ss_pred --hhhhhhhhc-CCCcCeEEEEEC-HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh-------HHHHHH
Confidence 337899998 59 999999999 7999988764 3345788999999999999985311 234667
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCc------------hHHHHHHHHHcCeeeecC
Q 024997 157 MKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE------------DKDCYGILKAAKIIGREG 224 (259)
Q Consensus 157 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ll~~~gi~~~~g 224 (259)
++++.+++.+.|+.+.... .+..+.+. |.++++++.... ...+.+.+.++||.++|.
T Consensus 355 ~~~~~~~l~~~L~~l~~~~----------~v~~v~~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 423 (476)
T 3i5t_A 355 AREMADYFAAALASLRDLP----------GVAETRSV-GLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL 423 (476)
T ss_dssp HHHHHHHHHHHHHTTTTST----------TEEEEEEE-TTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE
T ss_pred HHHHHHHHHHHHHHHhcCC----------CeEEEEec-CceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec
Confidence 7788888888887543211 13334444 445556654320 223444455689999982
Q ss_pred CcccCCCCeEEEE--eecChhhHHHHHHHHHHHhh
Q 024997 225 KKFRAEARFVRLS--LLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 225 ~~f~~~~~~~Ris--~~~~~~~~~~~~~~l~~~l~ 257 (259)
+ +++||+ +..+++++++++++|+++++
T Consensus 424 -----g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~ 452 (476)
T 3i5t_A 424 -----G-DLCVISPPLIISRAQIDEMVAIMRQAIT 452 (476)
T ss_dssp -----T-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----C-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2 899999 45599999999999999875
No 191
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.78 E-value=2.9e-18 Score=151.10 Aligned_cols=233 Identities=14% Similarity=0.027 Sum_probs=153.5
Q ss_pred CcccchhhhhhccCcc-----c--ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCC------CcEEE
Q 024997 3 FYPLYQEQTDYFESVD-----Y--KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGP------YAKSI 64 (259)
Q Consensus 3 ~y~~~~~~~~~~g~~~-----~--~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~------~~~vi 64 (259)
+|+.|...++..|.++ . .+.+|+++|++.+++++++|++++|+||||.+. .++|+++ |++++
T Consensus 148 ~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~ 227 (452)
T 2dgk_A 148 VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMH 227 (452)
T ss_dssp CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEE
T ss_pred CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEE
Confidence 4667777778777765 1 467899999999988899999999999999997 3888884 99999
Q ss_pred eeccc--c-----CCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHH-HHHHHhhhhh-----------cC
Q 024997 65 YDHAY--F-----WPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVY-QRMSAYISLN-----------TM 124 (259)
Q Consensus 65 ~De~y--~-----~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~-~~~~~~~~~~-----------~~ 124 (259)
+|++| + .+.. ... ...+-+.+..|++| ++..|+++||+++.+++++ +.+....... +.
T Consensus 228 vD~a~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 305 (452)
T 2dgk_A 228 IDAASGGFLAPFVAPDI-VWDFRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 305 (452)
T ss_dssp EECTTGGGTHHHHCTTC-CCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSC
T ss_pred EEcccHHHHHHhhCccc-hhhcCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCC
Confidence 99999 2 1111 111 23344667889999 4568899999999754333 3331111110 00
Q ss_pred -CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC----CCCeeEE
Q 024997 125 -GVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP----PSPAYAW 199 (259)
Q Consensus 125 -~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 199 (259)
+...+.|+++...+.. +.+.+..++..++++++.+.|++++++. ...+ ....++.
T Consensus 306 ~~~~~~~~~aal~~lg~-------~g~~~~~~~~~~~a~~l~~~L~~~~~~~-------------~~~~~~~~~~~~~v~ 365 (452)
T 2dgk_A 306 PAGQVIAQYYEFLRLGR-------EGYTKVQNASYQVAAYLADEIAKLGPYE-------------FICTGRPDEGIPAVC 365 (452)
T ss_dssp BCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTSSEE-------------EEEECCTTTBSSEEE
T ss_pred hhHHHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHHhCCCeE-------------EecCCCCCCCeEEEE
Confidence 1134455555555432 3467778889999999999999876432 2221 2233445
Q ss_pred EecCCC-----chHHHHHHHHHcCeeeecCCccc--CCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 200 VKCERE-----EDKDCYGILKAAKIIGREGKKFR--AEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 200 ~~~~~~-----~~~~~~~ll~~~gi~~~~g~~f~--~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+.++.. +...+.+.|.++||.++...... .+.+++|++++. +.++++.+++.|+++++
T Consensus 366 f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 366 FKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp EEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 555431 22455566667899765422111 134689999976 78899999999988764
No 192
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.77 E-value=2.4e-19 Score=156.60 Aligned_cols=206 Identities=12% Similarity=0.041 Sum_probs=136.8
Q ss_pred cChhhhcccCC---CCceEEEEcCCCCC-ChhhH---------HHhhcCCCcEEEeeccc--cCC-CCCCCC--CCCCCe
Q 024997 23 GEANLWGNASS---DTHLVEFVTAPNNP-DGQMN---------KAVLKGPYAKSIYDHAY--FWP-HFAPIP--APADEE 84 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p~NP-tG~~~---------~~la~~~~~~vi~De~y--~~~-~~~~~~--~~~~~~ 84 (259)
.|++.|++.++ +++++ ++++|+|| ||.+. .++ +++|+++|+||+| |.. ...... +....
T Consensus 184 ~d~~~le~~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d- 260 (424)
T 2e7u_A 184 NDPEGLREVLKRRGEEIAA-IIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPD- 260 (424)
T ss_dssp TCHHHHHHHHHHHGGGEEE-EEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCS-
T ss_pred CCHHHHHHHHHhCCCCEEE-EEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcc-
Confidence 47788888774 34555 77788765 88654 278 9999999999999 311 100000 11122
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHhh---hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI---SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRW 161 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
+.|+||.+| .|+|+||++++ +++++.+.... ...+++.+++.|.++.++++...+ .++..++++++.
T Consensus 261 --i~s~sK~l~-~G~~~G~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~------~~~~~~~~~~~~ 330 (424)
T 2e7u_A 261 --LVTLGKILG-GGLPAAAYAGR-REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE------NPGYYAYLEDLG 330 (424)
T ss_dssp --EEEECGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH------CTHHHHHHHHHH
T ss_pred --hhhhhhhhh-CCcceEEEEEc-HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh------ccHHHHHHHHHH
Confidence 349999999 69999999999 69988776522 234567889999998888874311 134577788888
Q ss_pred HHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--------------chHHHHHHHHHcCeeeecCCcc
Q 024997 162 ENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--------------EDKDCYGILKAAKIIGREGKKF 227 (259)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ll~~~gi~~~~g~~f 227 (259)
+.+.+.|+++.. .++ . ....++ .|.++|+++... ....+.+.|.++||.++|+..
T Consensus 331 ~~l~~~L~~~~~----~~~---~--~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~- 399 (424)
T 2e7u_A 331 ARLEAGLKEVLK----EKG---L--PHTVNR-VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF- 399 (424)
T ss_dssp HHHHHHHHHHHH----HTT---C--CCEEEE-ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS-
T ss_pred HHHHHHHHHHHH----hCC---C--ceEEEe-eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC-
Confidence 888888876420 000 0 111233 456788888641 122344444478999999641
Q ss_pred cCCCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 228 RAEARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 228 ~~~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..+|+++..+++++++++++|++++
T Consensus 400 ----~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 400 ----EAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp ----SCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ----CceEeeccCCHHHHHHHHHHHHHhC
Confidence 3578887679999999999998864
No 193
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.77 E-value=3.5e-17 Score=142.60 Aligned_cols=230 Identities=14% Similarity=0.086 Sum_probs=148.7
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++|+++ ||||... .++|+++|+++|+|++
T Consensus 89 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a 165 (418)
T 2c81_A 89 SLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCA 165 (418)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECc
Confidence 4889999998888887652 46778999999998888887754 5899875 3889999999999999
Q ss_pred ccCCC---CCCCCCCCCCeEEEecc--ccccCCCcceEEEEEecCHHHHHHHHHhhhhhc------------CC------
Q 024997 69 YFWPH---FAPIPAPADEELMIFTI--SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNT------------MG------ 125 (259)
Q Consensus 69 y~~~~---~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~------------~~------ 125 (259)
|.... ...+.... .+.+.|| ||.++. | |.||++++++++++.+........ ..
T Consensus 166 ~~~~~~~~~~~~~~~~--~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (418)
T 2c81_A 166 QSHGSVWNNQRAGTIG--DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKG 241 (418)
T ss_dssp TCTTCEETTEETTSSS--SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECC
T ss_pred ccccCccCCEeccccc--ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccc
Confidence 93111 11121111 3778888 999986 8 999999964688888876543211 00
Q ss_pred -C------CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee-CCCC---
Q 024997 126 -V------SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI-RPPS--- 194 (259)
Q Consensus 126 -~------~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 194 (259)
. ....+.+. .+.. .+.+++..++.+++++.+.+.|+++++ +... .+++
T Consensus 242 ~~~g~~~~~~~~~aa~--~~~~------l~~~~~~~~~~~~~~~~l~~~L~~~~g-------------~~~~~~~~~~~~ 300 (418)
T 2c81_A 242 DIQGSNYCLSEFQSAI--LLDQ------LQELDDKNAIREKNAMFLNDALSKIDG-------------IKVMKRPPQVSR 300 (418)
T ss_dssp SSCCCBCCCCHHHHHH--HHHH------HTTHHHHHHHHHHHHHHHHHHHTTSTT-------------EEECCCCTTEEE
T ss_pred cccCcCCCcCHHHHHH--HHHH------HHHHHHHHHHHHHHHHHHHHHhccCCC-------------cccCCCCCCCcc
Confidence 0 01122211 1111 123555667777778888888876543 2222 2333
Q ss_pred -CeeEE-EecCC-----CchHHHHHHHHHc-Cee---eecCCcccC--------------------------C-------
Q 024997 195 -PAYAW-VKCER-----EEDKDCYGILKAA-KII---GREGKKFRA--------------------------E------- 230 (259)
Q Consensus 195 -~~~~~-~~~~~-----~~~~~~~~ll~~~-gi~---~~~g~~f~~--------------------------~------- 230 (259)
.++++ +.++. .+.+.+.+.|.++ ||. +++|..... +
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (418)
T 2c81_A 301 QTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSER 380 (418)
T ss_dssp CCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHH
T ss_pred cccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHH
Confidence 22233 66652 3444555555566 999 887641100 0
Q ss_pred --CCeEEEEee--c-ChhhHHHHHHHHHHHhhh
Q 024997 231 --ARFVRLSLL--K-SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 231 --~~~~Ris~~--~-~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+||++. . ++++++.+++.|++++++
T Consensus 381 ~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 381 ASGQSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp HHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred HHhCEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 158999985 3 789999999999988753
No 194
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.77 E-value=1.4e-19 Score=158.58 Aligned_cols=211 Identities=12% Similarity=0.007 Sum_probs=137.6
Q ss_pred cChhhhcccCC---CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccccC-CCCCCCC-CCCCCeEEE
Q 024997 23 GEANLWGNASS---DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAYFW-PHFAPIP-APADEELMI 87 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y~~-~~~~~~~-~~~~~~i~~ 87 (259)
.|++.|++.++ +++++ ++++| +||||.+. .++|+++|+++|+||+|-+ ....... +..+....+
T Consensus 188 ~d~~~le~~l~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di 266 (434)
T 2epj_A 188 NDVEALERVFAEYGDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDI 266 (434)
T ss_dssp TCHHHHHHHHHHHGGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSE
T ss_pred CCHHHHHHHHHhCCCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCe
Confidence 47788888875 35666 56666 46799754 2899999999999999921 1110000 000111124
Q ss_pred eccccccCCCcceEEEEEecCHHHHHHHHHhh---hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 88 FTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI---SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 88 ~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
.|+||.++. |+|+||++++ +++++.+.... ...+++.+++.++++.++++...+ ++..++++++.+.+
T Consensus 267 ~s~sK~l~~-G~~~G~v~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~-------~~~~~~~~~~~~~l 337 (434)
T 2epj_A 267 IVLGKIIGG-GFPVGAVAGS-REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE-------EPVYSVSREAAKAL 337 (434)
T ss_dssp EEEEGGGGT-TSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHH
T ss_pred eeecchhcC-Ccceeeeeec-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-------cCHHHHHHHHHHHH
Confidence 599999984 9999999999 69888776522 234567889999988888875311 22466777777777
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--------------chHHHHHHHHHcCeeeecCCcccCC
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--------------EDKDCYGILKAAKIIGREGKKFRAE 230 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ll~~~gi~~~~g~~f~~~ 230 (259)
.+.|+++.. .+ + . ..... ..|.++|+.+... ..+.+.+.|.++||.++||.
T Consensus 338 ~~~L~~~~~----~~-~--~--~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----- 402 (434)
T 2epj_A 338 EEAASEVLD----RT-G--L--PYTIN-RVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSN----- 402 (434)
T ss_dssp HHHHHHHHH----HH-T--C--CEEEE-EETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSST-----
T ss_pred HHHHHHHHh----hC-C--C--cEEEE-EeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccC-----
Confidence 777775420 00 0 0 11122 3456778887641 12334444557899999864
Q ss_pred CCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 231 ARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 231 ~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
...+|+++..+++++++++++|++++++
T Consensus 403 ~~~~~~~~~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 403 LEAVFTGLPHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp TSCEECCTTCSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 2357888766999999999999988753
No 195
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.76 E-value=7.3e-18 Score=148.70 Aligned_cols=232 Identities=9% Similarity=-0.039 Sum_probs=152.8
Q ss_pred CCCcccchhhhhhccCccc---------ccccChhhhcccC-C----CCceEEEEcCCCCCChhhH-----HHhhcCCCc
Q 024997 1 MPFYPLYQEQTDYFESVDY---------KFEGEANLWGNAS-S----DTHLVEFVTAPNNPDGQMN-----KAVLKGPYA 61 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~---------~~~~d~~~l~~~~-~----~~~~~i~i~~p~NPtG~~~-----~~la~~~~~ 61 (259)
+|.|+.+...++..|.++. .+.+|+++|++.+ + .++.++++++||||||.+. .++|+++|+
T Consensus 183 ~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~ 262 (456)
T 2z67_A 183 YASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDI 262 (456)
T ss_dssp CCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTC
T ss_pred CCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 3677777777887777641 2468899999988 4 4677888999999999997 389999999
Q ss_pred EEEeeccccCCCC--CCCC--C-CCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q 024997 62 KSIYDHAYFWPHF--APIP--A-PADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFK 136 (259)
Q Consensus 62 ~vi~De~y~~~~~--~~~~--~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 136 (259)
++++|++|-.... .+.. . .....+++.|++|.++ .+.++||+++.++++++.+.........+.+.+.+.+++.
T Consensus 263 ~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~ 341 (456)
T 2z67_A 263 PHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLL 341 (456)
T ss_dssp CEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHH
T ss_pred cEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHH
Confidence 9999999821111 0110 0 0134678899999765 5688999999546888877433221111222444555544
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC---CCccccccccccccceeeCCCCCeeEEEec--CCCchHHHH
Q 024997 137 LLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN---RFSLQEIAPQYCTYFKKIRPPSPAYAWVKC--EREEDKDCY 211 (259)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 211 (259)
.+.. ..+++..++..++++++.+.|++++ ++ ....++ .++++++ +.. ...+.
T Consensus 342 ~l~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-------------~v~~~~--~~v~~~~~~~~~-~~~l~ 398 (456)
T 2z67_A 342 SMGS-------KNYLELVKNQKNSKKLLDELLNDLSKKTGG-------------KFLDVE--SPIASCISVNSD-PVEIA 398 (456)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-------------CBCCCC--CSSEEEEECSSC-HHHHH
T ss_pred HHHH-------HHHHHHHHHHHHHHHHHHHHHHhcccccCC-------------EecCCC--CeEEEEEecccH-HHHHH
Confidence 4432 3567778899999999999998763 31 122333 3445555 332 23344
Q ss_pred HHHHHcCe---eee------cCCcccC-CCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 212 GILKAAKI---IGR------EGKKFRA-EARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 212 ~ll~~~gi---~~~------~g~~f~~-~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
+.|.+.|+ .+. +|.+|.. +.+++|+|++. +++++++++++|++++
T Consensus 399 ~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 399 AKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred HHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 44556675 332 2445543 35899999873 8999999999998865
No 196
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.75 E-value=5e-19 Score=155.93 Aligned_cols=204 Identities=11% Similarity=-0.009 Sum_probs=133.0
Q ss_pred cChhhhcccCC---CCceEEEEcCCC-CCChhhH---------HHhhcCCCcEEEeeccc--cC-CCCCCCC--CCCCCe
Q 024997 23 GEANLWGNASS---DTHLVEFVTAPN-NPDGQMN---------KAVLKGPYAKSIYDHAY--FW-PHFAPIP--APADEE 84 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p~-NPtG~~~---------~~la~~~~~~vi~De~y--~~-~~~~~~~--~~~~~~ 84 (259)
.|+++|++.++ +++++ ++++|+ ||||.+. .++|+++|+++|+||+| |. ....... +... .
T Consensus 186 ~d~~~le~~l~~~~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~-d 263 (453)
T 2cy8_A 186 DDIEGMREVFANHGSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLDVQP-D 263 (453)
T ss_dssp TCHHHHHHHHHHHGGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCC-S
T ss_pred CCHHHHHHHHHhcCCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCchhhhHHhCCCC-c
Confidence 47788888875 35666 566665 7799753 28999999999999999 31 1100010 1111 1
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHH-----hhhhhcCCCCHHHHHHHHHHHHH-HHhcCCcchHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA-----YISLNTMGVSRECQLRAFKLLKV-VLEDGGNNIFEFGYNTMK 158 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 158 (259)
+.|+||.++ .|+|+||++++ +++++.+.. .....+++.+++.+.++.++++. . . ++..++++
T Consensus 264 --i~s~sK~l~-~G~~~G~v~~~-~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~-------~~~~~~~~ 331 (453)
T 2cy8_A 264 --LTCLAKASA-GGLPGGILGGR-EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E-------DDVCAKIN 331 (453)
T ss_dssp --EEEEEGGGG-TTSSCEEEEEC-HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H-------TTHHHHHH
T ss_pred --EEEEChhhh-CCcceEEEech-HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h-------hhHHHHHH
Confidence 349999998 59999999999 699887755 12334577889999998888873 2 1 22456777
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-----C------------c---hHHHHHHHHHcC
Q 024997 159 KRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-----E------------E---DKDCYGILKAAK 218 (259)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------------~---~~~~~~ll~~~g 218 (259)
++++.+.+.|+++.. .++ .....+ ..|.++|+.+.. . + ...+...|.++|
T Consensus 332 ~~~~~l~~~L~~~~~----~~~-----~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 401 (453)
T 2cy8_A 332 DLGQFAREAMNHLFA----RKG-----LNWLAY-GRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEG 401 (453)
T ss_dssp HHHHHHHHHHHHHHH----HTT-----CCEEEE-CCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh----hCC-----CcEEEE-EeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCC
Confidence 777777777765420 000 011223 346678888764 1 1 233444444689
Q ss_pred eeeecCCcccCCCCeEEEEeecChhhHHHHHHHHHHHhh
Q 024997 219 IIGREGKKFRAEARFVRLSLLKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 219 i~~~~g~~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~ 257 (259)
|.+.|+ +.+|+++..+++++++++++|+++++
T Consensus 402 v~v~~~-------~~~~l~~~~t~~~i~~~l~~l~~~l~ 433 (453)
T 2cy8_A 402 VDIGGR-------GSVFLSAQHEREHVEHLVTTFDRVLD 433 (453)
T ss_dssp EECBTT-------TEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEeCC-------CCEEeeccCCHHHHHHHHHHHHHHHH
Confidence 999652 24788766699999999999998875
No 197
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.74 E-value=6.5e-17 Score=138.50 Aligned_cols=229 Identities=14% Similarity=0.047 Sum_probs=153.5
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++|+ |+||||... .++|+++|+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a 158 (367)
T 3nyt_A 82 GFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAA 158 (367)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECT
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECc
Confidence 4788888888888887652 267789999999988888855 889999765 3899999999999999
Q ss_pred c-cCCC--CCCCCCCCCCeEEEecc--ccccCCCcceEEEEEecCHHHHHHHHHhhhh------------hcCCCCHHHH
Q 024997 69 Y-FWPH--FAPIPAPADEELMIFTI--SKLTGHAGSRFGWAVIKDEAVYQRMSAYISL------------NTMGVSRECQ 131 (259)
Q Consensus 69 y-~~~~--~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~------------~~~~~~~~~q 131 (259)
| ++.. .... ...+ ++++.|| +|.+|.+|. .|+++++++++.+.+...... .+...+++.+
T Consensus 159 ~~~g~~~~~~~~-~~~~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~a 235 (367)
T 3nyt_A 159 QSFGASYKGKRS-CNLS-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQA 235 (367)
T ss_dssp TTTTCEETTEET-TSSS-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHH
T ss_pred cccCCeECCeec-cCCC-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHH
Confidence 8 2111 1111 1111 6888997 899986576 899998767888888775442 2355667666
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHH
Q 024997 132 LRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCY 211 (259)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (259)
+++...++ .+++..++.+++.+.+.+.|++++ +.+....+. .........+.++ +.+.+.
T Consensus 236 a~~~~~l~---------~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~--------~~~~~~~~~~~~~--~~~~l~ 295 (367)
T 3nyt_A 236 AILLPKLE---------IFEEEIALRQKVAAEYDLSLKQVG-IGTPFIEVN--------NISVYAQYTVRMD--NRESVQ 295 (367)
T ss_dssp HHHHHHHH---------THHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTT--------EECCCSSEEEECS--SHHHHH
T ss_pred HHHHHHHH---------HHHHHHHHHHHHHHHHHHHhccCC-eeccCCCCC--------CceeeEEEEEEeC--CHHHHH
Confidence 66655555 234456667777788888888764 211100000 0011122334444 456677
Q ss_pred HHHHHcCeeeecCCccc---------C----------CCCeEEEEeec--ChhhHHHHHHHHHHH
Q 024997 212 GILKAAKIIGREGKKFR---------A----------EARFVRLSLLK--SQDDFDLLLHRLDEL 255 (259)
Q Consensus 212 ~ll~~~gi~~~~g~~f~---------~----------~~~~~Ris~~~--~~~~~~~~~~~l~~~ 255 (259)
+.|+++||.++++.... . ..+.+|+++.. ++++++.+++.++++
T Consensus 296 ~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 296 ASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 77778899998764311 0 03468999865 899999999998865
No 198
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.74 E-value=1.5e-17 Score=147.75 Aligned_cols=234 Identities=10% Similarity=0.017 Sum_probs=152.0
Q ss_pred CCCcccchhhhhhccCcc------cccccChhhhcccCCCCc------eEEEEcCCCCCChhhH-----HHhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVD------YKFEGEANLWGNASSDTH------LVEFVTAPNNPDGQMN-----KAVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~-----~~la~~~~~~v 63 (259)
+|+|+.+...++..|..+ ..+.+|+++|++.+++++ .++++++|+||||.+- .++|+++|+++
T Consensus 189 ~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~l 268 (486)
T 1js3_A 189 DQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWL 268 (486)
T ss_dssp TTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEE
T ss_pred CCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEE
Confidence 367888888888888765 245789999999985543 4889999999999886 38999999999
Q ss_pred Eeecccc-----CCCCCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHHH-HHHHH---Hhhhh------------
Q 024997 64 IYDHAYF-----WPHFAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAV-YQRMS---AYISL------------ 121 (259)
Q Consensus 64 i~De~y~-----~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~-~~~~~---~~~~~------------ 121 (259)
++|++|- .+..... .+......+..|++|.++.+ +++|++++.+++. .+.+. .+...
T Consensus 269 hvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 347 (486)
T 1js3_A 269 HVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYR 347 (486)
T ss_dssp EEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGG
T ss_pred EEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCcc
Confidence 9999991 1222111 12223356678899999855 8899999986553 34331 11100
Q ss_pred -----hcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee-CCCCC
Q 024997 122 -----NTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI-RPPSP 195 (259)
Q Consensus 122 -----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (259)
.+.....+.++++...+.. +.+.+..++..++++.+.+.|+++++ +... ++..+
T Consensus 348 ~~~~~~~rr~~~~~~~~al~~~g~-------~g~~~~~~~~~~~a~~l~~~L~~~~~-------------~~~~~~~~~~ 407 (486)
T 1js3_A 348 HWQLPLGRRFRSLKMWFVFRMYGV-------KGLQAYIRKHVQLSHEFEAFVLQDPR-------------FEVCAEVTLG 407 (486)
T ss_dssp GSSSCSCCCCTHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCTT-------------EEECSCCCSS
T ss_pred ccCCCCCCchhHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHhcCCC-------------eEEeCCCcee
Confidence 0112234556666555532 35677788889999999999988765 3332 24444
Q ss_pred eeEEEecCCCc--hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhh
Q 024997 196 AYAWVKCEREE--DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 196 ~~~~~~~~~~~--~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~ 257 (259)
++.+ .++..+ .+.+.+.|.+.|+.+.++..+. +.+++|++++. +.+++++++++|+++++
T Consensus 408 ~v~f-~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 472 (486)
T 1js3_A 408 LVCF-RLKGSDGLNEALLERINSARKIHLVPCRLR-GQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472 (486)
T ss_dssp EEEE-EESSCHHHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEE-EecChHHHHHHHHHHHHhcCCEEEEEEEEC-CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 4443 444321 2334444445676544433343 35799999853 67899999999988764
No 199
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.74 E-value=3.6e-17 Score=145.89 Aligned_cols=236 Identities=9% Similarity=0.034 Sum_probs=157.3
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCC------CcE
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGP------YAK 62 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~------~~~ 62 (259)
+|+|+.|...++..|..+. .+.+|+++|++.+++++++|++++|+||||.+. .++|+++ |++
T Consensus 161 ~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~ 240 (502)
T 3hbx_A 161 ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTP 240 (502)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCC
T ss_pred CCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCe
Confidence 3677888888888887641 267899999999999999999999999999987 3888888 999
Q ss_pred EEeecccc-------CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-hhh-----------c
Q 024997 63 SIYDHAYF-------WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-SLN-----------T 123 (259)
Q Consensus 63 vi~De~y~-------~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-~~~-----------~ 123 (259)
+++|++|- .+..........-+++..|.+|.++ .+.++||+++.+++.+....... ... +
T Consensus 241 l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~s 319 (502)
T 3hbx_A 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 319 (502)
T ss_dssp EEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCS
T ss_pred EEEECCccchhhhhhCcccccccCCCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCC
Confidence 99999992 1111111123345778889999874 66779998876544442211110 100 0
Q ss_pred -CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCeeEEEe
Q 024997 124 -MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVK 201 (259)
Q Consensus 124 -~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 201 (259)
.+.....|+++...+.. .-+.+..++..++.+++.+.|+++++ +....+ ....++.+.
T Consensus 320 r~~~~~~a~~~al~~lg~-------~g~~~~~~~~~~~a~~l~~~L~~~~~-------------~~~~~~~~~~~~v~f~ 379 (502)
T 3hbx_A 320 KGSSQVIAQYYQLIRLGH-------EGYRNVMENCRENMIVLREGLEKTER-------------FNIVSKDEGVPLVAFS 379 (502)
T ss_dssp CBSHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTTC-------------EEECSCSSSSSEEEEE
T ss_pred chHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhCCC-------------EEEEeCCCCceEEEEE
Confidence 01123445555554432 23566778888888999999998765 333333 344456666
Q ss_pred cCC---CchHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 202 CER---EEDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 202 ~~~---~~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
++. .+...+.+.|.++||.+........ +...+|++++. +.++++.+++.|+++++
T Consensus 380 ~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 380 LKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp ESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 654 2344566667788998864332221 34689999975 88999999999988765
No 200
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.74 E-value=2.4e-17 Score=141.36 Aligned_cols=232 Identities=13% Similarity=0.038 Sum_probs=145.0
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeecc
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHA 68 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~ 68 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++++ |+||||... .++|+++|+++|+|++
T Consensus 83 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a 159 (373)
T 3frk_A 83 SNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAA 159 (373)
T ss_dssp TTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred CCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECC
Confidence 4788888888888887652 356789999999988888866 888999876 3899999999999999
Q ss_pred ccCCCCCCCCC-CCCCeEEEeccc--cccCCCcceEEEEEecCHHHHHHHHHhhhhh------------cCCCCHHHHHH
Q 024997 69 YFWPHFAPIPA-PADEELMIFTIS--KLTGHAGSRFGWAVIKDEAVYQRMSAYISLN------------TMGVSRECQLR 133 (259)
Q Consensus 69 y~~~~~~~~~~-~~~~~i~~~S~S--K~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~q~~ 133 (259)
|-......... ..-..+.+.||| |.++..|. .|+++++++++.+.+....... ....+.+..++
T Consensus 160 ~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~ 238 (373)
T 3frk_A 160 QAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGD-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGF 238 (373)
T ss_dssp TCTTCEETTEETTSSSSEEEEECCTTSSSCCSSS-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHH
T ss_pred cccCCEECCEeccccccEEEEeCcCCCccCccce-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHH
Confidence 82111111100 001257888877 98874353 7999988667888777654421 22235554444
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCee-EEEecCCCchHHHHH
Q 024997 134 AFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAY-AWVKCEREEDKDCYG 212 (259)
Q Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 212 (259)
....++ .+++..++.+++.+.+.+.|++++ +.+...++ .....++ +.+... +.+.+.+
T Consensus 239 ~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~---------~~~~~~~~~~~~~~--~~~~l~~ 297 (373)
T 3frk_A 239 LRVKLK---------YLDKWNEERRKIAQKYIAGINNPN-VIIPVEAD---------YAKHVWYTFVIRSE--KRDELQK 297 (373)
T ss_dssp HHHHHH---------THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCT---------TEECCCSSEEEEES--SHHHHHH
T ss_pred HHHHHH---------HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCC---------CCceeeEEEEEEeC--CHHHHHH
Confidence 333333 234455666666666666666544 22110000 0011111 122222 4566677
Q ss_pred HHHHcCeeeecCCcccC----------------------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 213 ILKAAKIIGREGKKFRA----------------------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~----------------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.|.++||.++++..... ..+.+|+++.. ++++++.+++.|+++..
T Consensus 298 ~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 298 YLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp HHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred HHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 77788999987642110 01579999965 89999999999988654
No 201
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.72 E-value=3.1e-17 Score=143.29 Aligned_cols=241 Identities=10% Similarity=0.037 Sum_probs=146.6
Q ss_pred CCcccchhhh----hhccCccccc-cc-ChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEeeccc-
Q 024997 2 PFYPLYQEQT----DYFESVDYKF-EG-EANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYDHAY- 69 (259)
Q Consensus 2 P~y~~~~~~~----~~~g~~~~~~-~~-d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~De~y- 69 (259)
|.|+.+...+ +..|.++..+ .. |+++|++.+++++++|++++|+||||.++ .++|+++|+++|+|++|
T Consensus 105 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~ 184 (421)
T 2ctz_A 105 NLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFG 184 (421)
T ss_dssp CCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGG
T ss_pred CCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc
Confidence 5666655544 4556665444 33 67889999988999999999999999987 38999999999999999
Q ss_pred c-CCCCCCCCCCCCCeEEEeccccccCCCcceEEEEEecC--HHH----HHHHHH-------------------------
Q 024997 70 F-WPHFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKD--EAV----YQRMSA------------------------- 117 (259)
Q Consensus 70 ~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--~~~----~~~~~~------------------------- 117 (259)
- +.....+ ..+.++++.|+||.++.+|.|+|++++.+ .++ .+.+..
T Consensus 185 ~~g~~~~~~--~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~ 262 (421)
T 2ctz_A 185 MGGYLLRPL--AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARV 262 (421)
T ss_dssp GGGTSCCGG--GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHH
T ss_pred cccccCCcc--ccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHH
Confidence 3 2111111 22457999999999998999999888751 111 112211
Q ss_pred -hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc-c---ce-eeC
Q 024997 118 -YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCT-Y---FK-KIR 191 (259)
Q Consensus 118 -~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~-~~~ 191 (259)
.....+...++...+++...++ .+..+.++..++...+.+.|++++++.....+..... . +. ..+
T Consensus 263 ~~~~~~g~~~~~~~a~~~~~~l~---------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~ 333 (421)
T 2ctz_A 263 DGLRDQGQALGPFEAWVVLLGME---------TLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFK 333 (421)
T ss_dssp THHHHHCCCCCHHHHHHHHHHHT---------THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHT
T ss_pred HHHHhcCCCCCHHHHHHHHcCcc---------hHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhcc
Confidence 0111233455654444444443 3445566777899999999998776443221210000 0 00 000
Q ss_pred CCCCeeEEEecCCCchHHHHHHHHHc---CeeeecCCcc----------------------cCCCCeEEEEeecChhhHH
Q 024997 192 PPSPAYAWVKCEREEDKDCYGILKAA---KIIGREGKKF----------------------RAEARFVRLSLLKSQDDFD 246 (259)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~~~~g~~f----------------------~~~~~~~Ris~~~~~~~~~ 246 (259)
...|..+.+.+... .+....++++. ++.++.|... +..++.+|+|++. ++++
T Consensus 334 ~~~g~ivsf~l~~~-~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~ 410 (421)
T 2ctz_A 334 GKPGAVLTFGLKGG-YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVE 410 (421)
T ss_dssp TCCCSEEEEEETTH-HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHH
T ss_pred CCCceEEEEEeCCC-HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHH
Confidence 12344455666542 23444555443 4455555211 1125899999976 5777
Q ss_pred HHHHHHHHHh
Q 024997 247 LLLHRLDELI 256 (259)
Q Consensus 247 ~~~~~l~~~l 256 (259)
+.++.|.+.+
T Consensus 411 ~li~~l~~al 420 (421)
T 2ctz_A 411 DLKAELKEAL 420 (421)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 7888887765
No 202
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.72 E-value=6.2e-17 Score=144.50 Aligned_cols=236 Identities=11% Similarity=0.015 Sum_probs=153.8
Q ss_pred CCcccchhhhhhccC---cc------cccccChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCc
Q 024997 2 PFYPLYQEQTDYFES---VD------YKFEGEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYA 61 (259)
Q Consensus 2 P~y~~~~~~~~~~g~---~~------~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~ 61 (259)
+.|+.+...++..|. .+ ..+.+|+++|++.+++ ++++|++++|+||||.+. .++|+++|+
T Consensus 197 ~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~ 276 (504)
T 2okj_A 197 QSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 276 (504)
T ss_dssp TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred cchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 567777777777664 33 2467889999998844 588999999999999876 489999999
Q ss_pred EEEeecccc-----CCCC-CCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhh-hhhc-----------
Q 024997 62 KSIYDHAYF-----WPHF-APIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYI-SLNT----------- 123 (259)
Q Consensus 62 ~vi~De~y~-----~~~~-~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~-~~~~----------- 123 (259)
++++|++|- .+.+ ..+.+....++++.|++|.++.+ .++|++++.++++.+...... ....
T Consensus 277 ~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (504)
T 2okj_A 277 WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYD 355 (504)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGC
T ss_pred EEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCC
Confidence 999999992 1211 12222234468888999999854 689999998545655432211 1110
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee---C
Q 024997 124 ---------MGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI---R 191 (259)
Q Consensus 124 ---------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~ 191 (259)
.....+.++++.+.+.. ..+.+..++..++++++.+.|++++++ ... .
T Consensus 356 ~~~~~~~~~rr~~~l~~~a~l~~lg~-------~g~~~~~~~~~~~a~~l~~~L~~~~~~-------------~~~~~~~ 415 (504)
T 2okj_A 356 TGDKAIQCGRHVDIFKFWLMWKAKGT-------VGFENQINKCLELAEYLYAKIKNREEF-------------EMVFNGE 415 (504)
T ss_dssp CGGGSSCSSCBCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTE-------------EESSSSC
T ss_pred cccCCCCCCCCccHHHHHHHHHHhhH-------HHHHHHHHHHHHHHHHHHHHHhcCCCE-------------EEEecCC
Confidence 01135666666666542 346677888889999999999876543 222 2
Q ss_pred CCCCeeEEEecCCC----------------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee---cChhhHHHHHHHH
Q 024997 192 PPSPAYAWVKCERE----------------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL---KSQDDFDLLLHRL 252 (259)
Q Consensus 192 ~~~~~~~~~~~~~~----------------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~---~~~~~~~~~~~~l 252 (259)
|..+++.+...+.. ....+.+.|.+.|+.+..+..+....+++|++++ .+.++++.++++|
T Consensus 416 p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l 495 (504)
T 2okj_A 416 PEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEI 495 (504)
T ss_dssp CSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 55566555443320 0123444455667544433333322368999997 3889999999999
Q ss_pred HHHhhh
Q 024997 253 DELISK 258 (259)
Q Consensus 253 ~~~l~~ 258 (259)
++++++
T Consensus 496 ~~~~~~ 501 (504)
T 2okj_A 496 ERLGQD 501 (504)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 988753
No 203
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.72 E-value=2e-17 Score=146.05 Aligned_cols=210 Identities=15% Similarity=0.051 Sum_probs=131.3
Q ss_pred cccChhhhcccCC----CCceEEEEcCCCCCC-hhhH--------HHhhcCCCcEEEeeccc-c-----------CCCCC
Q 024997 21 FEGEANLWGNASS----DTHLVEFVTAPNNPD-GQMN--------KAVLKGPYAKSIYDHAY-F-----------WPHFA 75 (259)
Q Consensus 21 ~~~d~~~l~~~~~----~~~~~i~i~~p~NPt-G~~~--------~~la~~~~~~vi~De~y-~-----------~~~~~ 75 (259)
+.+|+++|++.++ +++++|++++||||+ |.++ .++|+++|+++|+|+++ + .....
T Consensus 165 ~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~ 244 (467)
T 2oqx_A 165 GNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW 244 (467)
T ss_dssp TCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS
T ss_pred CCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc
Confidence 3578899999885 478999999999998 6654 38999999999999433 1 00111
Q ss_pred CCCCC-----CCCeEEEeccccccCCC-cceEEEEEecCHH-HHH---HHHHhhhhh----cCC-CCHHHHHHHHHHHHH
Q 024997 76 PIPAP-----ADEELMIFTISKLTGHA-GSRFGWAVIKDEA-VYQ---RMSAYISLN----TMG-VSRECQLRAFKLLKV 140 (259)
Q Consensus 76 ~~~~~-----~~~~i~~~S~SK~~g~~-G~R~G~i~~~~~~-~~~---~~~~~~~~~----~~~-~~~~~q~~~~~~l~~ 140 (259)
+.... ....+++.|+||.+|++ | ||+++++ + +++ .++...... ..+ .+.....+....++.
T Consensus 245 ~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~ 320 (467)
T 2oqx_A 245 TIEQITRETYKYADMLAMSAKKDAMVPMG---GLLCMKD-DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_dssp CHHHHHHHHGGGCSEEEEESSSTTCCSSC---EEEEECS-GGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH
T ss_pred cHHHHhhhhhccCCeEEEecccccCCCCc---eEEEecC-hhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh
Confidence 11000 11235688999999877 6 8888885 5 444 343332111 011 122211111122221
Q ss_pred HHhcCCcchH-HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC----Cc-hHH-----
Q 024997 141 VLEDGGNNIF-EFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER----EE-DKD----- 209 (259)
Q Consensus 141 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~----- 209 (259)
++ ++..+...++.+.+.+.|++++ +... +.+++++|++++. .+ .++
T Consensus 321 --------~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 377 (467)
T 2oqx_A 321 --------GMNLDWLAYRIAQVQYLVDGLEEIG--------------VVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQAL 377 (467)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHTT--------------CCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHH
T ss_pred --------hhhHHHHHHHHHHHHHHHHHHHHCC--------------Ceee-cCCceEEEEechhhcccCCcccccHHHH
Confidence 12 1234556677888888888652 3344 5678889998742 22 222
Q ss_pred HHHHHHHcCeeeecCCcc--cC----------CCCeEEEEee---cChhhHHHHHHHHHHHhh
Q 024997 210 CYGILKAAKIIGREGKKF--RA----------EARFVRLSLL---KSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 210 ~~~ll~~~gi~~~~g~~f--~~----------~~~~~Ris~~---~~~~~~~~~~~~l~~~l~ 257 (259)
...++.++||.+.|+..| +. +.+++|++++ .+++++++++++|+++++
T Consensus 378 ~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~ 440 (467)
T 2oqx_A 378 ACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_dssp HHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence 445547889999995543 11 1379999997 678999999999998875
No 204
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.72 E-value=3e-17 Score=144.52 Aligned_cols=200 Identities=13% Similarity=0.009 Sum_probs=132.0
Q ss_pred hcccCC---CCceEEEEcCCCCCChh-hH--------HHhhcCCCcEEEeeccc--cCCCCC--CCC--CCCCCeEEEec
Q 024997 28 WGNASS---DTHLVEFVTAPNNPDGQ-MN--------KAVLKGPYAKSIYDHAY--FWPHFA--PIP--APADEELMIFT 89 (259)
Q Consensus 28 l~~~~~---~~~~~i~i~~p~NPtG~-~~--------~~la~~~~~~vi~De~y--~~~~~~--~~~--~~~~~~i~~~S 89 (259)
|++.++ +++++|+++.++||||. ++ .++|+++|+++|+||+| |+.... ... +.... +.|
T Consensus 221 le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~d---i~t 297 (449)
T 2cjg_A 221 ARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPD---IVA 297 (449)
T ss_dssp HHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEE
T ss_pred HHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCce---EEE
Confidence 777773 56777454444689995 43 38999999999999999 321111 111 22222 348
Q ss_pred cccccCCCcceEEEEEecCHHHHHHHH-----HhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 90 ISKLTGHAGSRFGWAVIKDEAVYQRMS-----AYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 90 ~SK~~g~~G~R~G~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+||.+ |+||++++ +++++.+. ......+++.+++.|.++.++++...+ +...++++++++.+
T Consensus 298 ~sK~l-----~iG~~~~~-~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~-------~~~~~~~~~~~~~l 364 (449)
T 2cjg_A 298 FGKKT-----QVCGVMAG-RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA-------EGLFERAVQHGKYL 364 (449)
T ss_dssp ECGGG-----SSEEEEEC-GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH-------HTHHHHHHHHHHHH
T ss_pred ecCcc-----cEEEEEEC-HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHH
Confidence 99988 78999999 58887522 222335678899999999988874311 23466778888888
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--c
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--K 240 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~ 240 (259)
.+.|+++.. .++. .+....+. |.+++++++.. ..++...++ ++||.++|+ +.+++|+++. .
T Consensus 365 ~~~L~~l~~----~~~~----~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~~iRi~~~~~~ 429 (449)
T 2cjg_A 365 RARLDELAA----DFPA----VVLDPRGR-GLMCAFSLPTTADRDELIRQLW-QRAVIVLPA-----GADTVRFRPPLTV 429 (449)
T ss_dssp HHHHHHHHH----HSTT----TSEEEEEE-TTEEEEECSSHHHHHHHHHHHH-HTTEECEEE-----TTTEEEECCCTTC
T ss_pred HHHHHHHHh----hCCC----ceeeEeec-cEEEEEEECChHHHHHHHHHHH-HCCeEEecC-----CCCEEEEECCCCC
Confidence 888876420 0000 02223344 45556788653 234555555 689999985 2589999764 4
Q ss_pred ChhhHHHHHHHHHHHhhh
Q 024997 241 SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~ 258 (259)
+++++++++++|++++++
T Consensus 430 t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 430 STAEIDAAIAAVRSALPV 447 (449)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 205
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.71 E-value=1.1e-16 Score=137.87 Aligned_cols=217 Identities=11% Similarity=0.049 Sum_probs=145.2
Q ss_pred ccChhhhcccCC-CCceEEEEcCCCCCChhhHH--------HhhcCCCcEEEeeccccCCCCCCCC-CCCCCeEEEeccc
Q 024997 22 EGEANLWGNASS-DTHLVEFVTAPNNPDGQMNK--------AVLKGPYAKSIYDHAYFWPHFAPIP-APADEELMIFTIS 91 (259)
Q Consensus 22 ~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~--------~la~~~~~~vi~De~y~~~~~~~~~-~~~~~~i~~~S~S 91 (259)
.+|+++|++.+. ++++++++++++||||.+++ ++|+++|+++|+|+++- ....+. ...+.++++.|++
T Consensus 121 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~--g~~~~~~~~~~~d~~~~s~~ 198 (379)
T 3ke3_A 121 PVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS--GCVWLDMKELGIDVLISAPQ 198 (379)
T ss_dssp CCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC--TTCCCCHHHHTCSEEEECTT
T ss_pred CCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc--CCccccccccCCCEEEecch
Confidence 378888998884 47888899999999999862 78999999999999873 111221 1224678999999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhhh------------------h----hcCCCCHHHHHHHHHHHHHHHhcCCcch
Q 024997 92 KLTGHAGSRFGWAVIKDEAVYQRMSAYIS------------------L----NTMGVSRECQLRAFKLLKVVLEDGGNNI 149 (259)
Q Consensus 92 K~~g~~G~R~G~i~~~~~~~~~~~~~~~~------------------~----~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 149 (259)
|.++ .+..+|+++++ +++++.+..... . ....++...++++.++++...+ .-
T Consensus 199 K~l~-~~~g~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~----~g 272 (379)
T 3ke3_A 199 KGWS-STPCAGLVMLS-AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKE----IG 272 (379)
T ss_dssp TTTC-SCCCEEEEEEC-HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHH----HC
T ss_pred hhcC-CCCceEEEEEC-HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHH----hc
Confidence 9885 23348999999 698887764110 0 1124566666666666664311 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHHHHcCeeeecCCcccC
Q 024997 150 FEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGILKAAKIIGREGKKFRA 229 (259)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~~~~g~~f~~ 229 (259)
+++..++++++.+.+.+.|++++ +.+. .+ .....+....+..+..+.. ....|.++||.+.+|..+..
T Consensus 273 ~~~~~~~~~~l~~~l~~~l~~~g-~~~~--~~--------~~~~~~~i~~~~~~~~~~~-~~~~L~~~Gi~v~~g~~~~~ 340 (379)
T 3ke3_A 273 FDILRDAQWELGNRVRKVLTDKG-IESV--AA--------EGFEAPGVVVSYTERDDMH-KGSAFAEAGLQIAAGVPLKV 340 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-CCBS--BC--------TTCBCSSEEEEECSCHHHH-SSHHHHHTTCCCEECCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CEec--CC--------ccccCceEEEEccCCcchH-HHHHHHHCCeEEeCCccccc
Confidence 56677888889999999998764 2211 10 0011222333333322111 24556788999999986542
Q ss_pred ----CCCeEEEEeec--ChhhHHHHHHHHHHHhhh
Q 024997 230 ----EARFVRLSLLK--SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 230 ----~~~~~Ris~~~--~~~~~~~~~~~l~~~l~~ 258 (259)
+.+.+|+|+.. +++++++++++|++++++
T Consensus 341 ~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 341 GEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp CCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred cccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 25799999864 889999999999988753
No 206
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.70 E-value=1.1e-16 Score=140.89 Aligned_cols=220 Identities=13% Similarity=-0.008 Sum_probs=128.8
Q ss_pred CCCcccchhhhhhccCcccc------------cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEE
Q 024997 1 MPFYPLYQEQTDYFESVDYK------------FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKS 63 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~~------------~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~v 63 (259)
+|+|+.+...+...|.++.. +.+|+++| +.++++++++++ +|+||.++ .++|+++|+++
T Consensus 103 ~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~l 178 (446)
T 2x3l_A 103 RNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPV 178 (446)
T ss_dssp TTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCE
T ss_pred cCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeE
Confidence 47888888888888876532 23455555 456788989998 56699987 38999999999
Q ss_pred Eeecccc-----CCCCCCCC-CCCCCeEEEeccccccCCCcceEEEEEecCHHHHH--HHHHhhhhhc-CCCCHHHHHHH
Q 024997 64 IYDHAYF-----WPHFAPIP-APADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQ--RMSAYISLNT-MGVSRECQLRA 134 (259)
Q Consensus 64 i~De~y~-----~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~--~~~~~~~~~~-~~~~~~~q~~~ 134 (259)
|+||+|. .+. +.. ...+..+++.|+||.++ .+.++||+++++ ++++ .+........ ..++.....++
T Consensus 179 ivDea~~~~~~f~~~--~~~~~~~g~Di~~~S~~K~l~-~~~g~g~l~~~~-~~i~~~~~~~~~~~~~~~s~~~~~~aal 254 (446)
T 2x3l_A 179 LIDEAHGAHFGLQGF--PDSTLNYQADYVVQSFHKTLP-ALTMGSVLYIHK-NAPYRENIIEYLSYFQTSSPSYLIMASL 254 (446)
T ss_dssp EEECTTCTTTTSTTS--CCCGGGGTCSEEEECHHHHSS-SCTTCEEEEEET-TCTTHHHHHHHHHHHSCSSCCHHHHHHH
T ss_pred EEcchhhhhhccCCC--CCChHHcCCCEEEECCccccc-cccccEEEEEcC-CcCCHHHHHHHHHHHcCCCchHHHHHHH
Confidence 9999982 111 121 11234699999999653 233479999984 6544 3333222222 33333333322
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCCchHHHHHHH
Q 024997 135 FKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREEDKDCYGIL 214 (259)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 214 (259)
..+++...+ ... ++..++.++..+.+.+. + +....+..+.++|++++..+...+.+.|
T Consensus 255 ~~a~~~l~~-~g~---~~~~~~~~~l~~~l~~~-----g-------------~~~~~~~~~~~l~i~~~~~~~~~l~~~L 312 (446)
T 2x3l_A 255 ESAAQFYKT-YDS---TLFFAKRAQLIECLENK-----G-------------FEMLQVDDPLKLLIKYEGFTGHDIQNWF 312 (446)
T ss_dssp HHHHHHHHH-CCC---HHHHHHHHHHHHHHHHH-----T-------------CEEEECSSTTEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHHH-hCH---HHHHHHHHHHHHHHHHc-----C-------------CEECcCCCCeEEEEEeCCcCHHHHHHHH
Confidence 223332110 011 11233333333333332 1 3333444556789988754555555666
Q ss_pred HHcCeeee-cCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 215 KAAKIIGR-EGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 215 ~~~gi~~~-~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.++||.++ +| .+++|++++. +++++ .++++|+++++
T Consensus 313 ~~~GI~v~~~g------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~ 351 (446)
T 2x3l_A 313 MNAHIYLELAD------DYQALAILPLWHHDDTY-LFDSLLRKIED 351 (446)
T ss_dssp HHTTEEESEEC------SSCEEEECCCCCTTCCC-CHHHHHHHHHT
T ss_pred HHCCCEEEecC------CCEEEEEeecCCCHHHH-HHHHHHHHHHH
Confidence 66799997 42 3689999975 78889 99999988765
No 207
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.68 E-value=1.7e-16 Score=141.47 Aligned_cols=234 Identities=11% Similarity=0.073 Sum_probs=146.2
Q ss_pred CCcccchhhhhhccC---cc------cccccChhhhcccCCC----C--ceEEEEcCCCCCChhhH-----HHhhcCCCc
Q 024997 2 PFYPLYQEQTDYFES---VD------YKFEGEANLWGNASSD----T--HLVEFVTAPNNPDGQMN-----KAVLKGPYA 61 (259)
Q Consensus 2 P~y~~~~~~~~~~g~---~~------~~~~~d~~~l~~~~~~----~--~~~i~i~~p~NPtG~~~-----~~la~~~~~ 61 (259)
+.|+.+...++..|. .+ ..+.+|+++|++.+.+ . +.++++++|+||||.+. .++|+++|+
T Consensus 210 ~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~ 289 (497)
T 2qma_A 210 KSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDM 289 (497)
T ss_dssp TSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 455666666666654 22 2356789999988843 2 34788899999999976 389999999
Q ss_pred EEEeecccc--C--CCCCC-CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCC----C------
Q 024997 62 KSIYDHAYF--W--PHFAP-IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMG----V------ 126 (259)
Q Consensus 62 ~vi~De~y~--~--~~~~~-~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~----~------ 126 (259)
++++|++|- . ..+.. +.+....++++.|++|.++.+ .++|++++.++..++.+.....+.... +
T Consensus 290 ~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 368 (497)
T 2qma_A 290 WMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKS 368 (497)
T ss_dssp EEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-------------------
T ss_pred EEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccC
Confidence 999999992 1 11111 112224467888999988755 689999987544343332111010000 0
Q ss_pred -------CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceee-CCCCCeeE
Q 024997 127 -------SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKI-RPPSPAYA 198 (259)
Q Consensus 127 -------~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 198 (259)
..+.++++...+ ....+.+..++..++++.+.+.|+++++ +... ++..+ ++
T Consensus 369 ~~~~r~~~al~~~~~l~~l-------g~~g~~~~~~~~~~~a~~l~~~L~~~~~-------------~~~~~~~~~~-~v 427 (497)
T 2qma_A 369 IATTKRFDALKVFMTMQNV-------GPKALGDMYDHLLAQTLEVADMIRTNDQ-------------FELLAEPSLS-TV 427 (497)
T ss_dssp -CCSCCCTHHHHHHHHHHT-------CHHHHHHHHHHHHHHHHHHHHHHHTCTT-------------EEECSCCSSS-EE
T ss_pred CCCCCchhHHHHHHHHHHh-------CHHHHHHHHHHHHHHHHHHHHHHhhCCC-------------eEEEcCCCce-EE
Confidence 112233333332 2345667788888999999999987654 3332 34444 45
Q ss_pred EEecCCCc------hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee---cChhhHHHHHHHHHHHhhh
Q 024997 199 WVKCEREE------DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL---KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 199 ~~~~~~~~------~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~---~~~~~~~~~~~~l~~~l~~ 258 (259)
++.+.... .+.+.+.+.+.|+.+.++..+. +.+++|+++. .++++++.++++|++++++
T Consensus 428 ~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~-g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 428 LFRATHETADLDELNKALRLEALTRGIAVLGETIVD-GKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 55554321 1233344556799887755443 3468999983 2899999999999988753
No 208
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.51 E-value=2.2e-18 Score=151.73 Aligned_cols=208 Identities=12% Similarity=0.046 Sum_probs=137.5
Q ss_pred cChhhhcccCC---CCceEEEEcCCCCCChhhHH---------HhhcCCCcEEEeeccccCCCCCCC-C-CCCCCeEEEe
Q 024997 23 GEANLWGNASS---DTHLVEFVTAPNNPDGQMNK---------AVLKGPYAKSIYDHAYFWPHFAPI-P-APADEELMIF 88 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~---------~la~~~~~~vi~De~y~~~~~~~~-~-~~~~~~i~~~ 88 (259)
.|++.|++.++ +++++|++...+|++|.+.+ ++|+++|+++|+||+|- -..... . +..+....+.
T Consensus 218 ~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~ 296 (465)
T 2yky_A 218 NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLT 296 (465)
Confidence 46788888886 57778555444667997652 89999999999999992 110001 0 1122233466
Q ss_pred ccccccCCCcceEEEEEecCHHHHHHHHH-----hhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAGSRFGWAVIKDEAVYQRMSA-----YISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 89 S~SK~~g~~G~R~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
||||.+| .|+|+||++++ +++++.+.. .....+++.+++.|+++.+.|+... . +...++++++.++
T Consensus 297 t~sK~lg-~G~piG~v~~~-~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~---~----~~~~~~~~~~~~~ 367 (465)
T 2yky_A 297 TLGKYIG-GGMSFGAFGGR-RDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY---T----RQAASDLSASGDR 367 (465)
Confidence 9999998 59999999999 699998876 2344667889999999988887431 1 1245666667777
Q ss_pred HHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-C--------------chHHHHHHHHHcCeeeecCCccc
Q 024997 164 LSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-E--------------EDKDCYGILKAAKIIGREGKKFR 228 (259)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~ll~~~gi~~~~g~~f~ 228 (259)
+.+.|+++.. ..+ +....+..|.++|+.+.. . ..+++..++ ++||.+.|+. |.
T Consensus 368 l~~~L~~~~~----~~~------~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~ 435 (465)
T 2yky_A 368 FRANLNRIAV----ENQ------APLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MY 435 (465)
Confidence 7766665421 000 111133456666766543 0 123444555 6899999865 32
Q ss_pred CCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 229 AEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 229 ~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
. +++..+++++++++++|.+++++
T Consensus 436 ---~---~s~~~t~edid~~l~~l~~~l~~ 459 (465)
T 2yky_A 436 ---A---LSLEIADAGRDAFAEALADFIGE 459 (465)
Confidence 1 77767999999999999988753
No 209
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.68 E-value=1.2e-15 Score=131.84 Aligned_cols=232 Identities=13% Similarity=0.029 Sum_probs=144.9
Q ss_pred CCCcccchhhhhhccCccc------ccccChhhhcccCCC---CceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTDYFESVDY------KFEGEANLWGNASSD---THLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~---~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++ +++++++++ |||... .++|+++|+++|+|
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~D 155 (394)
T 1o69_A 79 SFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIED 155 (394)
T ss_dssp SSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEE
Confidence 5899999999988887652 346788889888854 688888875 888765 38899999999999
Q ss_pred cccc-CC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCC--------------CCHH
Q 024997 67 HAYF-WP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMG--------------VSRE 129 (259)
Q Consensus 67 e~y~-~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 129 (259)
++|. +- ......... .+.+.|+||..+++|.|+||++++++++++.+.........+ .+++
T Consensus 156 ea~~~g~~~~~~~~~~~~--~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 233 (394)
T 1o69_A 156 AAEALGSFYKNKALGTFG--EFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNV 233 (394)
T ss_dssp CTTCTTCEETTEETTSSS--SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHH
T ss_pred CcCcccceeCCccccccc--CcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHH
Confidence 9992 21 111111112 255566643334457799999996468888887754322111 2333
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCe-eEEEecCC---
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPA-YAWVKCER--- 204 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~--- 204 (259)
...++...+ +++++..++++++++.+.+.|+++ +.+ .++ ... ..++ .+++.++.
T Consensus 234 ~aa~~l~~l---------~~l~~~~~~~~~~~~~l~~~L~~~--~~~--~~~--------~~~~~~~~~~~~i~~~~~~~ 292 (394)
T 1o69_A 234 LGAIGVAQM---------EVLEQRVLKKREIYEWYKEFLGEY--FSF--LDE--------LENSRSNRWLSTALINFDKN 292 (394)
T ss_dssp HHHHHHHHH---------TTHHHHHHHHHHHHHHHHHHHTTT--EEC--CCC--------CTTEECCCSSEEEEESCCGG
T ss_pred HHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhccc--ccc--cCC--------CCCCcceeEEEEEEecchhh
Confidence 333222222 246667888889999998888764 111 111 000 1222 34555552
Q ss_pred -------------------CchHHHHHHHHHcCeeeecCCcc---cC--CC--------------CeEEEEeec--Chhh
Q 024997 205 -------------------EEDKDCYGILKAAKIIGREGKKF---RA--EA--------------RFVRLSLLK--SQDD 244 (259)
Q Consensus 205 -------------------~~~~~~~~ll~~~gi~~~~g~~f---~~--~~--------------~~~Ris~~~--~~~~ 244 (259)
.+.+.+.+.|.++||.+++|... .+ .. +.+|+.... ++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ed 372 (394)
T 1o69_A 293 ELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDD 372 (394)
T ss_dssp GSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHH
T ss_pred ccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHH
Confidence 13455666677899999998432 11 00 234444433 8999
Q ss_pred HHHHHHHHHHHhhh
Q 024997 245 FDLLLHRLDELISK 258 (259)
Q Consensus 245 ~~~~~~~l~~~l~~ 258 (259)
++.+++.|+++++.
T Consensus 373 i~~~~~~l~~~~~~ 386 (394)
T 1o69_A 373 VYEISKLILKSIKA 386 (394)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 210
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.68 E-value=4.8e-15 Score=129.85 Aligned_cols=241 Identities=11% Similarity=0.037 Sum_probs=149.1
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEc-CCCCCChhh-HHHhhcCCCcEEEeecccc-
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVT-APNNPDGQM-NKAVLKGPYAKSIYDHAYF- 70 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~-~p~NPtG~~-~~~la~~~~~~vi~De~y~- 70 (259)
+|+|+.+...++..|.++. .+.+|+++|++.+++++++++++ +|+||.=.- +.++|+++|+++|+|++|.
T Consensus 117 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~ 196 (437)
T 3bb8_A 117 AAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAHTLGNLFDLAEVRRVADKYNLWLIEDCCDAL 196 (437)
T ss_dssp SSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCT
T ss_pred CCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeCCCCChhcHHHHHHHHHHcCCEEEEECcccc
Confidence 4788888888888887652 46678899999998889998887 578873211 1489999999999999992
Q ss_pred CC--CCCCCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhh--------------------------
Q 024997 71 WP--HFAPIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN-------------------------- 122 (259)
Q Consensus 71 ~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~-------------------------- 122 (259)
+. ....+... ..+++.||+|..+++|.|.|+++++++.+.+.+.......
T Consensus 197 g~~~~~~~~~~~--~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (437)
T 3bb8_A 197 GSTYDGKMAGTF--GDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPF 274 (437)
T ss_dssp TCEETTEETTSS--SSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCT
T ss_pred CceECCeecccc--cCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccc
Confidence 21 11111111 2477899999888899999999998533343333211100
Q ss_pred -------------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccee
Q 024997 123 -------------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKK 189 (259)
Q Consensus 123 -------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 189 (259)
....+.+.+.++...++. +.+..++.+++.+++.+.|++++++.. ++... -..
T Consensus 275 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~---------~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~---~~~ 340 (437)
T 3bb8_A 275 GYDHKYTYSHLGYNLKITDMQAACGLAQLER---------IEEFVEKRKANFKYLKDALQSCADFIE--LPEAT---ENS 340 (437)
T ss_dssp TCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHGGGGTTTEE--CCCCC---TTE
T ss_pred cccccccccccCcccCCCHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhhccCCccc--cCCCC---CCC
Confidence 112345555555555552 233344556777777788877643211 11000 000
Q ss_pred eCCCCCeeEE-EecC-CCchHHHHHHHHHcCeeeecCCc--cc-CC--------------------CCeEEEEeec--Ch
Q 024997 190 IRPPSPAYAW-VKCE-REEDKDCYGILKAAKIIGREGKK--FR-AE--------------------ARFVRLSLLK--SQ 242 (259)
Q Consensus 190 ~~~~~~~~~~-~~~~-~~~~~~~~~ll~~~gi~~~~g~~--f~-~~--------------------~~~~Ris~~~--~~ 242 (259)
.+....|++ ++.+ ..+.+.+.+.|.++||.++++.. +. .+ .+.+||++.. ++
T Consensus 341 -~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~ 419 (437)
T 3bb8_A 341 -DPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTH 419 (437)
T ss_dssp -ECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCH
T ss_pred -ceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCH
Confidence 011112333 4443 22456666777788999998754 11 00 1248999865 89
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
++++.+++.|+++++.
T Consensus 420 ~di~~i~~~l~~~~~~ 435 (437)
T 3bb8_A 420 DHLDYVVSKFEEFFGL 435 (437)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999999999998753
No 211
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.68 E-value=6.8e-16 Score=135.35 Aligned_cols=226 Identities=12% Similarity=0.109 Sum_probs=138.2
Q ss_pred CCCcccchhhhh----hccCcccc-----cccChhhhcccCCCCceEEEEcCCCCCChhhH-----HHhhcCCCcEEEee
Q 024997 1 MPFYPLYQEQTD----YFESVDYK-----FEGEANLWGNASSDTHLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIYD 66 (259)
Q Consensus 1 ~P~y~~~~~~~~----~~g~~~~~-----~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~D 66 (259)
+|+|+.|...++ ..|.++.. +.+|+++ +++++++|++++| ||||.+. .++|+++|+++++|
T Consensus 157 ~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd 231 (438)
T 1wyu_A 157 QGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAV 231 (438)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEE
T ss_pred CccCHhHHHHHHHHHHHCCCEEEEEcCcCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEE
Confidence 467887776553 35765532 2344433 6778999999999 9999987 38899999999966
Q ss_pred c--cccCCCCCCCCCCCCCeEEEeccccccC----CCcceEEEEEecCHHHHHHHHHh----------------------
Q 024997 67 H--AYFWPHFAPIPAPADEELMIFTISKLTG----HAGSRFGWAVIKDEAVYQRMSAY---------------------- 118 (259)
Q Consensus 67 e--~y~~~~~~~~~~~~~~~i~~~S~SK~~g----~~G~R~G~i~~~~~~~~~~~~~~---------------------- 118 (259)
- ..|+.. ..++..+..++++| +|.|| +.|.|+||++++ +++++.+...
T Consensus 232 ~d~~a~g~~--~~~~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~ 307 (438)
T 1wyu_A 232 ADPLSLGVL--KPPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATK-KAFVRQLPGRLVSETVDVEGRRGFILTLQARE 307 (438)
T ss_dssp CCTTGGGTB--CCHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC-GGGGGGCCSCCEEEEEBTTSCEEEEECCGGGS
T ss_pred echhhccCc--CCCccCCCCEEEEC-CcccCCCccCCCCCeeEEEEc-HHHHHhCCCceeccccccCCCcceeeeccccc
Confidence 2 212211 11122234567777 66654 456789999999 5776654211
Q ss_pred ----hhhhcCCC---CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC
Q 024997 119 ----ISLNTMGV---SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR 191 (259)
Q Consensus 119 ----~~~~~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 191 (259)
....+.++ +......+...+... ....+.+..+++.++++++.+.|++++++ ....
T Consensus 308 ~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~----~~~g~~~~~~~~~~~~~~l~~~L~~~~g~-------------~~~~ 370 (438)
T 1wyu_A 308 QYIRRAKAKSNITTNAQLTALMGAMYLAAL----GPEGLREVALKSVEMAHKLHALLLEVPGV-------------RPFT 370 (438)
T ss_dssp HHHHGGGSSCCCCSCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTSTTC-------------EECS
T ss_pred cccchhcccCCccchHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHhcCCCe-------------EECC
Confidence 00112222 222222122123321 12236677888889999999999877542 2222
Q ss_pred CCCCeeE--EEecCCCchHHHHHHHHHcCeee--ecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 192 PPSPAYA--WVKCEREEDKDCYGILKAAKIIG--REGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 192 ~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~~--~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
+. +++. .+..+. +...+.+.|.++||.+ +++..|+ ++++|+|+.. +++++++++++|++++
T Consensus 371 ~~-~~~~~~~~~~~~-~~~~~~~~L~~~gi~v~~~~~~~~~--~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 371 PK-PFFNEFALALPK-DPEAVRRALAERGFHGATPVPREYG--ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CS-SBCSEEEEECSS-CHHHHHHHHHHTTCCCCEECCTTSC--SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred CC-CeEEEEEEeCCC-CHHHHHHHHHHCCceeccccccccC--CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 22 2332 233332 3344444455679999 6777665 5899999974 8899999999998875
No 212
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.66 E-value=5.6e-15 Score=130.81 Aligned_cols=214 Identities=13% Similarity=0.048 Sum_probs=145.5
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CCC-CCCCCCCCCCeEEEecc
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WPH-FAPIPAPADEELMIFTI 90 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~~-~~~~~~~~~~~i~~~S~ 90 (259)
+.+|+++|++.+. .++++|++++|+||+..-+ .++|+++|+++++|++++ .+. ..++ ....+++.|+
T Consensus 188 ~~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~ 264 (490)
T 2a7v_A 188 GLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTT 264 (490)
T ss_dssp CSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEES
T ss_pred CCcCHHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCCEEEECC
Confidence 5788999999884 4788888899999986444 489999999999999973 111 1122 1346899999
Q ss_pred ccccCCCcceEEEEEecCH--------------HHHHHHHHhhhhhcCC-CCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 024997 91 SKLTGHAGSRFGWAVIKDE--------------AVYQRMSAYISLNTMG-VSRECQLRAFKLLKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 155 (259)
||.++ |.|.|++++++. ++.+.++........+ ++.....+...++... ......+..+
T Consensus 265 hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~----~~~~~~~~~~ 338 (490)
T 2a7v_A 265 HKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA----CTPMFREYSL 338 (490)
T ss_dssp SGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH----HSHHHHHHHH
T ss_pred cccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHH----hhhhHHHHHH
Confidence 99984 566799999842 2556666554433333 3333333334344432 1123466788
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeC-CCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCccc----
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-PPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFR---- 228 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~---- 228 (259)
++.++++.+.+.|++.+ +.... ......+|+++... +.+.+.+.|++.||.+..+..++
T Consensus 339 ~~~~na~~L~~~L~~~G--------------~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p 404 (490)
T 2a7v_A 339 QVLKNARAMADALLERG--------------YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSA 404 (490)
T ss_dssp HHHHHHHHHHHHHHHTT--------------CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCS
T ss_pred HHHHHHHHHHHHHHHcC--------------cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCC
Confidence 89999999999998764 22222 23356788887643 46778888889999998653333
Q ss_pred CCCCeEEEEe------ecChhhHHHHHHHHHHHhh
Q 024997 229 AEARFVRLSL------LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 229 ~~~~~~Ris~------~~~~~~~~~~~~~l~~~l~ 257 (259)
..+..+||+. +.++++++++.+.|.++++
T Consensus 405 ~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 405 ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 1357899976 2378899999998888764
No 213
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.66 E-value=6.6e-16 Score=132.94 Aligned_cols=234 Identities=14% Similarity=0.081 Sum_probs=152.5
Q ss_pred CCCcccchhhhhhccCcc-------cccccChhhhcccC-CCC--ceEEEEcCCCCCChhhH-----HHhhcCCCcEEEe
Q 024997 1 MPFYPLYQEQTDYFESVD-------YKFEGEANLWGNAS-SDT--HLVEFVTAPNNPDGQMN-----KAVLKGPYAKSIY 65 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~-------~~~~~d~~~l~~~~-~~~--~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi~ 65 (259)
+|+|+.+...++..|.++ ..|.+|+++|++.+ +++ +++|+ |+||+|... .++|+ +|+++|+
T Consensus 85 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~ 160 (377)
T 3ju7_A 85 SFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVV 160 (377)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEE
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEE
Confidence 478999998888888865 24678899999987 556 88855 788999876 38899 9999999
Q ss_pred eccc-cCCC--CCCCCCCCCCeEEEecc--ccccCCCcceEEEEEecCHHHHHHHHHhhhhh------------cCCCCH
Q 024997 66 DHAY-FWPH--FAPIPAPADEELMIFTI--SKLTGHAGSRFGWAVIKDEAVYQRMSAYISLN------------TMGVSR 128 (259)
Q Consensus 66 De~y-~~~~--~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~------------~~~~~~ 128 (259)
|++| ++.. ...+ +..-..+.+.|| +|.++. | +.|+++++++++.+.++...... ....+.
T Consensus 161 D~a~a~g~~~~~~~~-g~~~~d~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~ 237 (377)
T 3ju7_A 161 DAAPGFGLMNGGMHY-GQDFSGMIIYSFHATKPFGI-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSE 237 (377)
T ss_dssp ECTTCTTCEETTEET-TTTCSSEEEEECBTTSSSCC-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCH
T ss_pred ECCCccCCeECCEec-cCCCCcEEEEECCCCCcCCC-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCH
Confidence 9998 3211 1111 000123555555 699984 5 67888887788888887765422 345667
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC-ch
Q 024997 129 ECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE-ED 207 (259)
Q Consensus 129 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 207 (259)
+.++++...++ .+++..++.+++++.+.+.|++++++.+...+.. .......|+.+.++.. +.
T Consensus 238 ~~aa~~~~~l~---------~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 301 (377)
T 3ju7_A 238 YAAAIGIATMK---------KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQK-------TEAVIQQFMPILCPEEVRN 301 (377)
T ss_dssp HHHHHHHHHHH---------THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCC-------CSCBCCSSEEEECCTTSCH
T ss_pred HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCC-------CCcceEEEEEEEeCChhhH
Confidence 76666655555 3455677778888888888888764322211110 0011112334444432 36
Q ss_pred HHHHHHHHHcCeeeecCCc--cc-----C-------------CCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 208 KDCYGILKAAKIIGREGKK--FR-----A-------------EARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 208 ~~~~~ll~~~gi~~~~g~~--f~-----~-------------~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
+.+.+.|+++||.++.+.. +. . ..+.+||.+.. ++++++..++.|+++++
T Consensus 302 ~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 302 KQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp HHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence 6777788889999887651 11 0 03468999865 88999999999988765
No 214
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.64 E-value=6.3e-15 Score=127.92 Aligned_cols=161 Identities=12% Similarity=0.021 Sum_probs=112.9
Q ss_pred CCcccchhh----------hhhccCccc------ccccChhhhcccCCCCceEEEEcC----CCCCChhhHH-----Hhh
Q 024997 2 PFYPLYQEQ----------TDYFESVDY------KFEGEANLWGNASSDTHLVEFVTA----PNNPDGQMNK-----AVL 56 (259)
Q Consensus 2 P~y~~~~~~----------~~~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~----p~NPtG~~~~-----~la 56 (259)
|.|+.+... ++..|.++. .+.+|+++|++.+++++++|++++ |+||||.+.+ ++|
T Consensus 110 ~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la 189 (409)
T 3jzl_A 110 QPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFV 189 (409)
T ss_dssp SCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred CCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHH
Confidence 667777643 344455442 234789999999998999999999 9999999983 889
Q ss_pred cC--CCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhh----hcCCCCHH
Q 024997 57 KG--PYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISL----NTMGVSRE 129 (259)
Q Consensus 57 ~~--~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~----~~~~~~~~ 129 (259)
++ +|+++++|++|-......-+...+.+++++|+||.+|.+| .+.||++++ +++++++...... ...+++..
T Consensus 190 ~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~~~ 268 (409)
T 3jzl_A 190 KNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGASLY 268 (409)
T ss_dssp HHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTT
T ss_pred HhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhccccccccccccHH
Confidence 99 9999999999821111111112345799999999998555 446999999 7999998875432 11222222
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
.+.++.+.+. ....++++..++...+.+.|++++
T Consensus 269 ~~~~~l~gl~---------~~~~r~~~~~~~a~~la~~L~~~g 302 (409)
T 3jzl_A 269 SLLEMYQGFF---------LAPHVTAQAIKGARFTAAMLAEFG 302 (409)
T ss_dssp CHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHh---------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1333444443 345568888999999999999876
No 215
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.64 E-value=6.5e-15 Score=128.37 Aligned_cols=161 Identities=10% Similarity=-0.011 Sum_probs=111.9
Q ss_pred CCcccch-----------hhhhhccCccc-----ccccChhhhcccCC--CCceEEEEcC----CCCCChhhHH-----H
Q 024997 2 PFYPLYQ-----------EQTDYFESVDY-----KFEGEANLWGNASS--DTHLVEFVTA----PNNPDGQMNK-----A 54 (259)
Q Consensus 2 P~y~~~~-----------~~~~~~g~~~~-----~~~~d~~~l~~~~~--~~~~~i~i~~----p~NPtG~~~~-----~ 54 (259)
|.|+.+. ..++..|.++. .+.+|+++|++.++ +++++|++++ |+||||.+.. +
T Consensus 125 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ 204 (427)
T 3hvy_A 125 MPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIK 204 (427)
T ss_dssp SCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHH
T ss_pred CCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHH
Confidence 6676665 23344565542 34578999999987 8999999999 9999999873 8
Q ss_pred hhcC--CCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhhhhhc----CCCC
Q 024997 55 VLKG--PYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISLNT----MGVS 127 (259)
Q Consensus 55 la~~--~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~~~----~~~~ 127 (259)
+|++ +|+++++|++|-......-+...+.+++++|+||.+|.+| .+.||++++ ++++++++....... .+++
T Consensus 205 ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~ 283 (427)
T 3hvy_A 205 SIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGST 283 (427)
T ss_dssp HHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCC
T ss_pred HHHHhCCCCEEEEECCccccccCCCCcccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCC
Confidence 8999 8999999999821111111112345799999999998544 456999998 799999987543211 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 128 RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 128 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
......+.+.+. ....++++..++...+.+.|++++
T Consensus 284 ~~~a~~~~~gl~---------~~~~r~~~~~~~a~~la~~L~~~g 319 (427)
T 3hvy_A 284 FGVMRSLYEGLF---------MAPHVTIEAVKGAVFCARIMELAG 319 (427)
T ss_dssp TTCHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHh---------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 221333444443 345578889999999999999876
No 216
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.63 E-value=6.6e-15 Score=128.33 Aligned_cols=141 Identities=10% Similarity=-0.036 Sum_probs=102.1
Q ss_pred ccChhhhcccCC--CCceEEEEcC----CCCCChhhHH-----HhhcC--CCcEEEeeccccCCCCCCCCCCCCCeEEEe
Q 024997 22 EGEANLWGNASS--DTHLVEFVTA----PNNPDGQMNK-----AVLKG--PYAKSIYDHAYFWPHFAPIPAPADEELMIF 88 (259)
Q Consensus 22 ~~d~~~l~~~~~--~~~~~i~i~~----p~NPtG~~~~-----~la~~--~~~~vi~De~y~~~~~~~~~~~~~~~i~~~ 88 (259)
.+|+++|++.++ +++++|++++ |+||||.+.+ ++|++ +|+++++|++|-......-+...+.+++++
T Consensus 161 ~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~ 240 (427)
T 3i16_A 161 KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAG 240 (427)
T ss_dssp SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEE
T ss_pred CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEe
Confidence 478899999986 7899999999 9999999873 88999 999999999982111111111234579999
Q ss_pred ccccccCCCc-ceEEEEEecCHHHHHHHHHhhhh--hcCCCCH-HH-HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 024997 89 TISKLTGHAG-SRFGWAVIKDEAVYQRMSAYISL--NTMGVSR-EC-QLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWEN 163 (259)
Q Consensus 89 S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~~~--~~~~~~~-~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
|+||.+|.+| .+.||++++ ++++++++..... .....++ .. ...+.+.+. ....++++..+++..
T Consensus 241 S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~---------~~~~r~~~~~~~a~~ 310 (427)
T 3i16_A 241 SLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLF---------LAPHISMEALKGAIL 310 (427)
T ss_dssp ETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH---------HHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCccHHHHHHHHHHHH---------HHHHHHHHHHHHHHH
Confidence 9999998655 667999999 7999998874422 1111122 22 233333333 455678899999999
Q ss_pred HHHHHHhcC
Q 024997 164 LSKIISLSN 172 (259)
Q Consensus 164 ~~~~l~~~~ 172 (259)
+.+.|++++
T Consensus 311 la~~L~~~g 319 (427)
T 3i16_A 311 CSRIMELAG 319 (427)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhCC
Confidence 999999876
No 217
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.62 E-value=5.4e-15 Score=132.11 Aligned_cols=234 Identities=12% Similarity=0.022 Sum_probs=148.7
Q ss_pred CCcccchhhhhhccC---cc------cccccChhhhcccCCCC------ceEEEEcCCCCCChhhH-----HHhhcCCCc
Q 024997 2 PFYPLYQEQTDYFES---VD------YKFEGEANLWGNASSDT------HLVEFVTAPNNPDGQMN-----KAVLKGPYA 61 (259)
Q Consensus 2 P~y~~~~~~~~~~g~---~~------~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~-----~~la~~~~~ 61 (259)
++|+.+...++..|. .+ ..+.+|+++|++.+.+. ++++++++|+||||.+. .++|+++|+
T Consensus 200 ~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~ 279 (511)
T 3vp6_A 200 QSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 279 (511)
T ss_dssp TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCC
Confidence 577778888888876 33 23578999999988543 88999999999999986 389999999
Q ss_pred EEEeecccc-----CCCCC-CCCCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhh-hh------------
Q 024997 62 KSIYDHAYF-----WPHFA-PIPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYIS-LN------------ 122 (259)
Q Consensus 62 ~vi~De~y~-----~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~-~~------------ 122 (259)
++++|++|- .+.+. .+.+....++++.+.+|.++.+ ..+|++++.++++......... +.
T Consensus 280 ~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 358 (511)
T 3vp6_A 280 WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYD 358 (511)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGC
T ss_pred EEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccC
Confidence 999999991 12111 1112234477889999998744 5689988876556555432110 00
Q ss_pred --------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC---
Q 024997 123 --------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR--- 191 (259)
Q Consensus 123 --------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 191 (259)
+.....+...++...+. ...+++..++..++.+++.+.|++++++. ...
T Consensus 359 ~~~~~~~~~r~~~al~~~~al~~~g-------~~gl~~~~~~~~~~a~~l~~~L~~~pg~~-------------l~~~~~ 418 (511)
T 3vp6_A 359 TGDKAIQCGRHVDIFKFWLMWKAKG-------TVGFENQINKCLELAEYLYAKIKNREEFE-------------MVFNGE 418 (511)
T ss_dssp CGGGSSCSSCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHSCTTEE-------------ESSSSC
T ss_pred ccCCCCCCCCchHHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHHHHHHHhcCCCEE-------------EEecCC
Confidence 00112333444444443 24677788899999999999998776532 222
Q ss_pred CCCCeeEEEecCCC------c----------hHHHHHHHHHcCeeeecCCcccC-CCCeEEEEeec---ChhhHHHHHHH
Q 024997 192 PPSPAYAWVKCERE------E----------DKDCYGILKAAKIIGREGKKFRA-EARFVRLSLLK---SQDDFDLLLHR 251 (259)
Q Consensus 192 ~~~~~~~~~~~~~~------~----------~~~~~~ll~~~gi~~~~g~~f~~-~~~~~Ris~~~---~~~~~~~~~~~ 251 (259)
|..+.+.|.-.+.. + ...+.+.|.+.|+.+.. ..+.. +.+++|++++. +.++++.+++.
T Consensus 419 p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~ 497 (511)
T 3vp6_A 419 PEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEE 497 (511)
T ss_dssp CSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHH
T ss_pred CCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHH
Confidence 44444433222211 0 11344445556765544 22222 23579999943 78999999999
Q ss_pred HHHHhh
Q 024997 252 LDELIS 257 (259)
Q Consensus 252 l~~~l~ 257 (259)
|+++-+
T Consensus 498 i~~~~~ 503 (511)
T 3vp6_A 498 IERLGQ 503 (511)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 887643
No 218
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.62 E-value=1.1e-15 Score=135.31 Aligned_cols=205 Identities=11% Similarity=0.016 Sum_probs=132.1
Q ss_pred ChhhhcccCCC------CceEEEEcCCCCCChhhH---------HHhhcCCCcEEEeeccc--cCCCC--CCCCCCCCC-
Q 024997 24 EANLWGNASSD------THLVEFVTAPNNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHF--APIPAPADE- 83 (259)
Q Consensus 24 d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~--~~~~~~~~~- 83 (259)
|++.|++.+++ ++++|+++..+|++|.+. .++|+++|+++|+||+| |+... ..+. ..+.
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~-~~gv~ 319 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHE-HWGLD 319 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGG-GGCCS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhcc-ccCCC
Confidence 56778888754 678866666688899753 28999999999999999 32211 1111 1111
Q ss_pred -eEEEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 024997 84 -ELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWE 162 (259)
Q Consensus 84 -~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
...+.||||.+ +.| ||++ + +++. .+.......+.+.+++.|.++.++++...+ +...++++++++
T Consensus 320 ~~~Di~t~sK~~-l~G---G~~~-~-~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~~~-------~~~~~~~~~~~~ 385 (472)
T 1ohv_A 320 DPADVMTFSKKM-MTG---GFFH-K-EEFR-PNAPYRIFNTWLGDPSKNLLLAEVINIIKR-------EDLLSNAAHAGK 385 (472)
T ss_dssp SCCSEEEECGGG-SSE---EEEE-C-GGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHHHH-------TTHHHHHHHHHH
T ss_pred CCCCEEEEcccc-ccC---CccC-c-hhhc-ccccccccCccCccHHHHHHHHHHHHHHHh-------CCHHHHHHHHHH
Confidence 12356999995 346 7777 5 4652 222333345667899999999888875321 124677788888
Q ss_pred HHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC--chHHHHHHHHHcCeeeecCCcccCCCCeEEEEee-
Q 024997 163 NLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE--EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLL- 239 (259)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~- 239 (259)
++.+.|+++.. .++. .+....+. |.++++++... ..++...++ ++||.+.|+ +.+++|++++
T Consensus 386 ~l~~~L~~l~~----~~~~----~v~~~~~~-g~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----g~~~iRi~~~~ 450 (472)
T 1ohv_A 386 VLLTGLLDLQA----RYPQ----FISRVRGR-GTFCSFDTPDESIRNKLISIAR-NKGVMLGGC-----GDKSIRFRPTL 450 (472)
T ss_dssp HHHHHHHHHHH----HCTT----TCEEEEEE-TTEEEEECSSHHHHHHHHHHHH-HTTEECEEE-----TTTEEEECCCT
T ss_pred HHHHHHHHHHh----hCCC----cEEeecCC-ceEEEEEeCChhHHHHHHHHHH-HCCeEEecC-----CCCEEEEECCC
Confidence 88888776420 0100 02223444 44556677542 234555555 689999984 2579999775
Q ss_pred -cChhhHHHHHHHHHHHhhh
Q 024997 240 -KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 240 -~~~~~~~~~~~~l~~~l~~ 258 (259)
.+++++++++++|++++++
T Consensus 451 ~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 451 VFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp TCCHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 3899999999999998764
No 219
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.61 E-value=7.4e-15 Score=131.39 Aligned_cols=236 Identities=11% Similarity=0.001 Sum_probs=146.7
Q ss_pred CCcccchhhhhhccC---cc------cccccChhhhcccCCC------CceEEEEcCCCCCChhhH-----HHhhcCCCc
Q 024997 2 PFYPLYQEQTDYFES---VD------YKFEGEANLWGNASSD------THLVEFVTAPNNPDGQMN-----KAVLKGPYA 61 (259)
Q Consensus 2 P~y~~~~~~~~~~g~---~~------~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~-----~~la~~~~~ 61 (259)
+.|+.+...++..|. .+ ..+.+|+++|++.+.+ ++++|++++|+||||.+. .++|+++|+
T Consensus 211 ~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~ 290 (515)
T 2jis_A 211 ECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGL 290 (515)
T ss_dssp TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC
T ss_pred CccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCC
Confidence 456777777777665 33 2356788999988843 488999999999999886 389999999
Q ss_pred EEEeecccc-----CCCCC-CCCCCCCCeEEEeccccccCCCcceEEEEEecCH-HHHHHHH----Hhhhh---------
Q 024997 62 KSIYDHAYF-----WPHFA-PIPAPADEELMIFTISKLTGHAGSRFGWAVIKDE-AVYQRMS----AYISL--------- 121 (259)
Q Consensus 62 ~vi~De~y~-----~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~~~~----~~~~~--------- 121 (259)
++++|++|- .+.+. .+.+..+.++++.|++|.++.+ .++|++++.++ ++++... .+...
T Consensus 291 ~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 369 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVAL 369 (515)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC---------CCSCGGG
T ss_pred eEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhccCCcccccccC
Confidence 999999992 11111 1222334578999999998733 56999999863 3655421 11100
Q ss_pred --h------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeC-C
Q 024997 122 --N------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIR-P 192 (259)
Q Consensus 122 --~------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 192 (259)
. ......+.++++.+.+.. ..+++..++..++.+++.+.|++++++. ... +
T Consensus 370 ~~~~~~~~~~rr~~al~~~~~l~~lg~-------~g~~~~~~~~~~~a~~l~~~L~~~~g~~-------------~~~~~ 429 (515)
T 2jis_A 370 DTGDKVVQCGRRVDCLKLWLMWKAQGD-------QGLERRIDQAFVLARYLVEEMKKREGFE-------------LVMEP 429 (515)
T ss_dssp CCGGGCSCSSCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTSTTEE-------------ESSCC
T ss_pred CCCCCCCCCCCcccHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHhcCCCEE-------------EeCCC
Confidence 0 001123444555555542 2466678888899999999998876532 222 3
Q ss_pred CCCeeEEEecCC------CchH----------HHHHHHHHcCeeeecCCcccCCCCeEEEEee---cChhhHHHHHHHHH
Q 024997 193 PSPAYAWVKCER------EEDK----------DCYGILKAAKIIGREGKKFRAEARFVRLSLL---KSQDDFDLLLHRLD 253 (259)
Q Consensus 193 ~~~~~~~~~~~~------~~~~----------~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~---~~~~~~~~~~~~l~ 253 (259)
..+.+.+...+. ...+ .+...+.+.|+............+++|++++ .+.++++.++++|+
T Consensus 430 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~ 509 (515)
T 2jis_A 430 EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELE 509 (515)
T ss_dssp SSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 344444433221 0011 1233344567654321111122468999995 38999999999999
Q ss_pred HHhhh
Q 024997 254 ELISK 258 (259)
Q Consensus 254 ~~l~~ 258 (259)
+++++
T Consensus 510 ~~~~~ 514 (515)
T 2jis_A 510 RLGQD 514 (515)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 88753
No 220
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.58 E-value=1.2e-13 Score=118.95 Aligned_cols=227 Identities=13% Similarity=-0.011 Sum_probs=140.6
Q ss_pred CCCcccchhhhhhccCccc-------ccccChhhhcccCCCCceEEEEcC-CCCCChhh-HHHhhcCCCcEEEeeccccC
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFEGEANLWGNASSDTHLVEFVTA-PNNPDGQM-NKAVLKGPYAKSIYDHAYFW 71 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~~d~~~l~~~~~~~~~~i~i~~-p~NPtG~~-~~~la~~~~~~vi~De~y~~ 71 (259)
+|+|+.+...++..|.++. .+.+|+++|++.++++++++++++ ++||.=.- +.++|+++|+++|+|++|-.
T Consensus 87 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 87 AVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVNLLGNPNNFDEINKIIGGRDIILLEDNCESM 166 (390)
T ss_dssp SSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEECGGGCCCCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEECCccChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence 4788888888888787652 267788999999988889888876 55662111 14899999999999999921
Q ss_pred CCCCCCCCCCCCeEEEecccc----ccCCCcceEEEEEecCHHHHHHHHHhhhhh-------------------------
Q 024997 72 PHFAPIPAPADEELMIFTISK----LTGHAGSRFGWAVIKDEAVYQRMSAYISLN------------------------- 122 (259)
Q Consensus 72 ~~~~~~~~~~~~~i~~~S~SK----~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~------------------------- 122 (259)
...... ...+....+.++|| .++ +| +.|+++++++++.+.+.......
T Consensus 167 g~~~~~-~~~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
T 3b8x_A 167 GATFNN-KCAGTFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFK 243 (390)
T ss_dssp TCEETT-EETTSSSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSC
T ss_pred cCEECC-cccccccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccc
Confidence 111111 11122223444444 442 23 34999988557777665543211
Q ss_pred ------cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCC--CC
Q 024997 123 ------TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP--PS 194 (259)
Q Consensus 123 ------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~ 194 (259)
..+.+++...++...++ .+++..++.+++++++.+.|++++++.+ ..+ ..
T Consensus 244 ~~~~g~~~~~~~~~aa~~l~~l~---------~l~~~~~~~~~~~~~l~~~L~~~~~~~~-------------~~~~~~~ 301 (390)
T 3b8x_A 244 FVLPGYNVRPLEMSGAIGIEQLK---------KLPRFISVRRKNAEYFLDKFKDHPYLDV-------------QQETGES 301 (390)
T ss_dssp BCSCCCBCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTTCSSEEE-------------CCCCSBC
T ss_pred eeccccccCcCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhcCCCCccc-------------CCCCCCc
Confidence 11155665555555444 4556777888888888888887654221 111 23
Q ss_pred Ce-eEEEecC---CCchHHHHHHHHHcCeeeec---CCcccC-C--------------------CCeEEEEeec--Chhh
Q 024997 195 PA-YAWVKCE---REEDKDCYGILKAAKIIGRE---GKKFRA-E--------------------ARFVRLSLLK--SQDD 244 (259)
Q Consensus 195 ~~-~~~~~~~---~~~~~~~~~ll~~~gi~~~~---g~~f~~-~--------------------~~~~Ris~~~--~~~~ 244 (259)
++ .+++.++ ..+.+.+.+.|.++||.+++ |..+.. + .+.+||++.. ++++
T Consensus 302 ~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~d 381 (390)
T 3b8x_A 302 SWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDE 381 (390)
T ss_dssp CCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHH
T ss_pred ccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHH
Confidence 33 2455555 22456666777789999987 321111 0 1358999866 8899
Q ss_pred HHHHHHHH
Q 024997 245 FDLLLHRL 252 (259)
Q Consensus 245 ~~~~~~~l 252 (259)
++.+++.|
T Consensus 382 i~~i~~~l 389 (390)
T 3b8x_A 382 IDYLREVL 389 (390)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 99988875
No 221
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.56 E-value=2.5e-14 Score=126.93 Aligned_cols=232 Identities=9% Similarity=-0.038 Sum_probs=149.0
Q ss_pred CCcccchhhhhhccCcc------cccccChhhhcccCCCC------ceEEEEcCCCCCChhhH-----HHhhcCCCcEEE
Q 024997 2 PFYPLYQEQTDYFESVD------YKFEGEANLWGNASSDT------HLVEFVTAPNNPDGQMN-----KAVLKGPYAKSI 64 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~------~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi 64 (259)
+.++.+...++..|..+ ..+.+|+++|++.+++. +.+++++.++|+||.+- .++|+++|++++
T Consensus 196 ~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 196 QAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLH 275 (481)
T ss_dssp TSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred cchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEE
Confidence 45556666666666654 24578999999998432 67789999999999886 389999999999
Q ss_pred eecccc-----CCCCCCC-CCCCCCeEEEeccccccCCCcceEEEEEecCHHHHHHHHH-hhhhh---------------
Q 024997 65 YDHAYF-----WPHFAPI-PAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSA-YISLN--------------- 122 (259)
Q Consensus 65 ~De~y~-----~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~-~~~~~--------------- 122 (259)
+|++|- .+..... .+....+.+..+++|.++.+ .-+|++++.+++....... ...+.
T Consensus 276 vDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 354 (481)
T 4e1o_A 276 IDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQ 354 (481)
T ss_dssp EECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGS
T ss_pred eehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCccccc
Confidence 999991 1212111 12223367788999998754 3367777776555432111 00000
Q ss_pred ---cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEE
Q 024997 123 ---TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAW 199 (259)
Q Consensus 123 ---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (259)
+.....+.++++...+.. +.+++..++..++.+.+.+.|+++++ +....+.....++
T Consensus 355 ~~~~r~~~~l~~~~al~~~g~-------~g~~~~~~~~~~~a~~l~~~L~~~~g-------------~~~~~~~~~~~v~ 414 (481)
T 4e1o_A 355 IPLSRRFRSVKLWFVIRSFGV-------KNLQAHVRHGTEMAKYFESLVRNDPS-------------FEIPAKRHLGLVV 414 (481)
T ss_dssp SSSCCCCTHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTCTT-------------EECCSCCCSSEEE
T ss_pred ccCCCCccHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHhcCCC-------------eEEecCCceeEEE
Confidence 011134555655555542 35677788899999999999998765 3333444556667
Q ss_pred EecCCC---chHHHHHHHHHcC-eeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhh
Q 024997 200 VKCERE---EDKDCYGILKAAK-IIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 200 ~~~~~~---~~~~~~~ll~~~g-i~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~ 257 (259)
++++.. ..++...+. +.| +.+.|+... +..++|++++. ++++++.++++|+++.+
T Consensus 415 f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 476 (481)
T 4e1o_A 415 FRLKGPNSLTENVLKEIA-KAGRLFLIPATIQ--DKLIIRFTVTSQFTTRDDILRDWNLIRDAAT 476 (481)
T ss_dssp EEESSCHHHHHHHHHHHH-HHCSSBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeCCchHHHHHHHHHHH-hCCeEEEEeeEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 777543 234445545 455 455543322 35689999864 67899999999988765
No 222
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.56 E-value=2.9e-14 Score=126.32 Aligned_cols=232 Identities=10% Similarity=0.014 Sum_probs=145.1
Q ss_pred CCcccchhhhhhccCccc------ccccChhhhcccCCCC------ceEEEEcCCCCCChhhH-----HHhhcCCCcEEE
Q 024997 2 PFYPLYQEQTDYFESVDY------KFEGEANLWGNASSDT------HLVEFVTAPNNPDGQMN-----KAVLKGPYAKSI 64 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~------~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~-----~~la~~~~~~vi 64 (259)
+.++.+...++..|..+. .+ +|+++|++.+++. +.+++++.++|+||.+. .++|+++|++++
T Consensus 190 ~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lh 268 (475)
T 3k40_A 190 QAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIH 268 (475)
T ss_dssp TSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred CchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEE
Confidence 345556666666676542 34 8999999988432 67789999999999986 389999999999
Q ss_pred eecccc-----CCCCCC-CCCCCCCeEEEeccccccCCCcceEEEEEecCHHHH-HHHHH---hhhhh-----------c
Q 024997 65 YDHAYF-----WPHFAP-IPAPADEELMIFTISKLTGHAGSRFGWAVIKDEAVY-QRMSA---YISLN-----------T 123 (259)
Q Consensus 65 ~De~y~-----~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~-~~~~~---~~~~~-----------~ 123 (259)
+|++|- .+.... +.+....+.+..|++|.++.| ..+|+++..+++.. +.+.. +.... +
T Consensus 269 vD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 347 (475)
T 3k40_A 269 VDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQ 347 (475)
T ss_dssp EECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC--------------------------
T ss_pred EeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccccc
Confidence 999991 121111 112223477889999987633 44788887754432 22211 11000 0
Q ss_pred C-C---CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEE
Q 024997 124 M-G---VSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAW 199 (259)
Q Consensus 124 ~-~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (259)
. + ...+.++++...+.. ..+++..++..++.+++.+.|+++++ +....+.....++
T Consensus 348 ~~~sr~~~~l~l~~al~~~g~-------~g~~~~~~~~~~~a~~l~~~L~~~~g-------------~~l~~~~~~~iv~ 407 (475)
T 3k40_A 348 IPLGRRFRALKLWFVLRLYGV-------ENLQAHIRRHCNFAKQFGDLCVADSR-------------FELAAEINMGLVC 407 (475)
T ss_dssp -CCCGGGTHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHSTT-------------EEESSCCBTTEEE
T ss_pred ccCCCcccHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHhcCCC-------------EEEecCCceEEEE
Confidence 0 0 123444445444432 34667788889999999999998765 3333444445556
Q ss_pred EecCCC---chHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec---ChhhHHHHHHHHHHHhh
Q 024997 200 VKCERE---EDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK---SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 200 ~~~~~~---~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~---~~~~~~~~~~~l~~~l~ 257 (259)
++++.. ..++...+.++.++.+.|+... +..++|++++. ++++++.++++|+++.+
T Consensus 408 f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 408 FRLKGSNERNEALLKRINGRGHIHLVPAKIK--DVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp EEESSCHHHHHHHHHHHHHHTSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeCCchHHHHHHHHHHHhCCcEEEEeeEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 666432 2345555555544455554433 35789999864 78899999999988764
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.55 E-value=5e-13 Score=123.47 Aligned_cols=244 Identities=9% Similarity=0.020 Sum_probs=143.1
Q ss_pred CCcccchhh-hhhccCccc-------cc----ccChhhh-----cccCCCC------c----eEEEEcCCCCCChhhH--
Q 024997 2 PFYPLYQEQ-TDYFESVDY-------KF----EGEANLW-----GNASSDT------H----LVEFVTAPNNPDGQMN-- 52 (259)
Q Consensus 2 P~y~~~~~~-~~~~g~~~~-------~~----~~d~~~l-----~~~~~~~------~----~~i~i~~p~NPtG~~~-- 52 (259)
|+|+.+... +++.|.++. .| .+|+++| ++.++++ + +++++++| ||+|.+.
T Consensus 221 ~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl 299 (730)
T 1c4k_A 221 NNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNA 299 (730)
T ss_dssp TCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECH
T ss_pred CchHHHHHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCH
Confidence 566666655 666676542 12 2688888 8888654 4 88899999 6999987
Q ss_pred ---HHhhcCCCcEEEeecccc-----CCCC---CCCC----CC-CCCeEEEeccccccCCCcceE-EEEEecCHHH----
Q 024997 53 ---KAVLKGPYAKSIYDHAYF-----WPHF---APIP----AP-ADEELMIFTISKLTGHAGSRF-GWAVIKDEAV---- 111 (259)
Q Consensus 53 ---~~la~~~~~~vi~De~y~-----~~~~---~~~~----~~-~~~~i~~~S~SK~~g~~G~R~-G~i~~~~~~~---- 111 (259)
.++|+++|+++++|++|. .+.. ..+. +. .+++++++|+||.++ |.+. |+++++++.+
T Consensus 300 ~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~ 377 (730)
T 1c4k_A 300 HEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQL 377 (730)
T ss_dssp HHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTST
T ss_pred HHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcc
Confidence 389999999999999982 2211 1121 11 235699999999874 4444 5665553221
Q ss_pred ----HHHHHHhhh-hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHh-cCCCccccccc----
Q 024997 112 ----YQRMSAYIS-LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISL-SNRFSLQEIAP---- 181 (259)
Q Consensus 112 ----~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~---- 181 (259)
...+..... ..+..++....++...+++.. ......++.+++.++.+.+++.|++ ++++.+..-..
T Consensus 378 ~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l----~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~ 453 (730)
T 1c4k_A 378 RYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQ----EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGK 453 (730)
T ss_dssp TCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH----SHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTE
T ss_pred cccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH----HhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccc
Confidence 123333222 222344444444433344422 1112344567788888888888887 56554321100
Q ss_pred -----------cccccceeeC---------C-CCCee-----EEEecCC------------CchHHHHHHHHHcCeeeec
Q 024997 182 -----------QYCTYFKKIR---------P-PSPAY-----AWVKCER------------EEDKDCYGILKAAKIIGRE 223 (259)
Q Consensus 182 -----------~~~~~~~~~~---------~-~~~~~-----~~~~~~~------------~~~~~~~~ll~~~gi~~~~ 223 (259)
....+|...+ . .+.++ +.+..+. .+...+.+.|+++||.+..
T Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~ 533 (730)
T 1c4k_A 454 KWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEK 533 (730)
T ss_dssp EGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSE
T ss_pred cccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEE
Confidence 0001111100 0 11111 4555532 2345666677778998865
Q ss_pred CCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHhh
Q 024997 224 GKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 224 g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l~ 257 (259)
.+.+.+|++++. ++++++.+++.|.++.+
T Consensus 534 -----~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 534 -----SDLNSILFLMTPAETPAKMNNLITQLLQLQR 564 (730)
T ss_dssp -----ECSSEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 235788999865 88999999999887754
No 224
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.50 E-value=2.2e-13 Score=116.70 Aligned_cols=216 Identities=12% Similarity=0.042 Sum_probs=140.0
Q ss_pred ccChhhhcccCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcce
Q 024997 22 EGEANLWGNASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSR 100 (259)
Q Consensus 22 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 100 (259)
..+++.++..++++++++.+++-.|.||.+++-+|+++|+++++|.+. ++.....+ +..+ ++..|..|.+|.+|
T Consensus 139 ~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pii~~~~~~~~~vD~~q~~g~~~id~-~~~~--~~~~s~~K~~gp~G-- 213 (377)
T 3e77_A 139 TKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDV-SKFG--VIFAGAQKNVGSAG-- 213 (377)
T ss_dssp CSCCCGGGCCCCTTCSCEEEESEETTTTEECSSCCCCTTCCEEEECTTTTTSSCCCG-GGCS--EEEEEGGGTTSCTT--
T ss_pred CCCCChHHhccCCCccEEEEeCccCchheEchhhhccCCCEEEEEcccccCCCCCch-hhcC--EEEEecccccCCCc--
Confidence 456677777788899998999888999999866788999999999977 22111112 2223 47789999999999
Q ss_pred EEEEEecCHHHHHHHH----------Hh-hhhhcCCCC-HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 101 FGWAVIKDEAVYQRMS----------AY-ISLNTMGVS-RECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 101 ~G~i~~~~~~~~~~~~----------~~-~~~~~~~~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
+|++++. +++++.+. .. ......+.+ ...-+++.++++...+ ..=++...++.++..+++.+.|
T Consensus 214 ~g~l~~~-~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~---~GG~~~i~~~~~~l~~~l~~~L 289 (377)
T 3e77_A 214 VTVVIVR-DDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKN---NGGAAAMEKLSSIKSQTIYEII 289 (377)
T ss_dssp CEEEEEE-TTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEc-HHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHH
Confidence 7888887 35532211 11 111123333 3333444455553211 1125667888889999999999
Q ss_pred HhcCCCccccccccccccceeeCCCCCeeEEEecCCCc--h---HHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--C
Q 024997 169 SLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCEREE--D---KDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--S 241 (259)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~ 241 (259)
++++++.+....+ ...++..+.+.++..+ . ..+...++++||.+++|... .+.+|+|+.. +
T Consensus 290 ~~~~g~~~~~~~~---------~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~---~g~iRiS~~~~~t 357 (377)
T 3e77_A 290 DNSQGFYVCPVEP---------QNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRS---VGGIRASLYNAVT 357 (377)
T ss_dssp HTSTTSEECCSCG---------GGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTT---TCSEEEECCTTSC
T ss_pred HhcCCceecCCCH---------HHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCc---CCEEEEECCCCCC
Confidence 9876533211000 1234445566666531 1 23444455789999987632 3569999976 8
Q ss_pred hhhHHHHHHHHHHHhhh
Q 024997 242 QDDFDLLLHRLDELISK 258 (259)
Q Consensus 242 ~~~~~~~~~~l~~~l~~ 258 (259)
.++++.+++.|++++++
T Consensus 358 ~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 358 IEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998865
No 225
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.49 E-value=1.7e-12 Score=110.70 Aligned_cols=209 Identities=16% Similarity=0.148 Sum_probs=140.4
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhhHHHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCcceE
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQMNKAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAGSRF 101 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 101 (259)
++++. + ++++++++.+++.+|.||.+++.+++. |+++++|.+. ++.....+ .+-.+++.|..|.+|.+| +
T Consensus 131 ~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~i~~~-~~~~~vD~~q~~g~~~id~---~~~d~~~~s~~K~~gp~G--~ 201 (361)
T 3m5u_A 131 HIPRV--E-FSDNADYAYICSNNTIYGTQYQNYPKT-KTPLIVDASSDFFSRKVDF---SNIALFYGGVQKNAGISG--L 201 (361)
T ss_dssp SCCCC--C-CCTTSSEEEEESEETTTTEECSSCCCC-SSCEEEECGGGTTSSCCCC---TTEEEEEEETTTTSSCTT--C
T ss_pred cCChh--h-cCCCCCEEEEeCCCCCcceeCCccccc-CCEEEEEcccccCCCCCCc---ccCCEEEEechhccCCCc--c
Confidence 45555 3 788999999998899999997777765 9999999987 32112222 234688999999999999 8
Q ss_pred EEEEecCHHHHHHHHH--------hh----hhhcCCC-CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH
Q 024997 102 GWAVIKDEAVYQRMSA--------YI----SLNTMGV-SRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKII 168 (259)
Q Consensus 102 G~i~~~~~~~~~~~~~--------~~----~~~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (259)
|++++. +++++.+.. +. .....+. +...-.++.++++...+ ..-++...++.++..+++.+.|
T Consensus 202 g~l~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~---~gG~~~i~~~~~~l~~~l~~~L 277 (361)
T 3m5u_A 202 SCIFIR-KDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLN---QGGLDKVHEKNSQKATMLYECI 277 (361)
T ss_dssp EEEEEE-HHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEc-HHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHH
Confidence 999999 688877653 11 1112233 33444445555553211 1025667888889999999999
Q ss_pred HhcCCC-ccccccccccccceeeCCCCCeeEEEecCC---CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--Ch
Q 024997 169 SLSNRF-SLQEIAPQYCTYFKKIRPPSPAYAWVKCER---EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQ 242 (259)
Q Consensus 169 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~ 242 (259)
++++++ .+. ..+ ...++..+.+.+++ .+ +.+...|+++||.+++|... .+.+|+|+.. +.
T Consensus 278 ~~~~g~~~~~-~~~---------~~rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~g~~~---~g~iRiS~~~~~t~ 343 (361)
T 3m5u_A 278 DLSNGFYKGH-ADK---------KDRSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLKGHRI---LGGIRASIYNALNL 343 (361)
T ss_dssp HTSTTSEEES-SCG---------GGBCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCBCCTT---TCSEEEECCTTSCH
T ss_pred HHCCCeeecc-CCH---------HHcCCeEEEEECCCchhhh-HHHHHHHHHCCCEEecCCCc---cCeEEEEccCCCCH
Confidence 887743 111 000 11233445566664 23 34556778899999887643 2459999976 89
Q ss_pred hhHHHHHHHHHHHhhh
Q 024997 243 DDFDLLLHRLDELISK 258 (259)
Q Consensus 243 ~~~~~~~~~l~~~l~~ 258 (259)
++++.+++.|+++.++
T Consensus 344 edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 344 DQVKTLCEFMKEFQGK 359 (361)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 226
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.48 E-value=2.2e-13 Score=119.09 Aligned_cols=161 Identities=12% Similarity=-0.043 Sum_probs=107.4
Q ss_pred CCcccchhhhh----------hccCccc------ccccChhhhcccCCCCceEEEEcC-CCCCChhhH--------HHhh
Q 024997 2 PFYPLYQEQTD----------YFESVDY------KFEGEANLWGNASSDTHLVEFVTA-PNNPDGQMN--------KAVL 56 (259)
Q Consensus 2 P~y~~~~~~~~----------~~g~~~~------~~~~d~~~l~~~~~~~~~~i~i~~-p~NPtG~~~--------~~la 56 (259)
|.|+.+...+. ..|.++. .+.+|+++|++.+++++++|++++ ||||+|... .++|
T Consensus 116 ~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la 195 (431)
T 3ht4_A 116 KPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFV 195 (431)
T ss_dssp SCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred CCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence 67777775543 2455442 245789999999998999999995 888888765 2889
Q ss_pred cC--CCcEEEeeccccCCCCCCCCCCCCCeEEEeccccccCC-CcceEEEEEecCHHHHHHHHHhhhhhc----CCCCHH
Q 024997 57 KG--PYAKSIYDHAYFWPHFAPIPAPADEELMIFTISKLTGH-AGSRFGWAVIKDEAVYQRMSAYISLNT----MGVSRE 129 (259)
Q Consensus 57 ~~--~~~~vi~De~y~~~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~i~~~~~~~~~~~~~~~~~~~----~~~~~~ 129 (259)
++ +|+++|+|++|-......-+...+.+++++|+||.+|. .+...||++++ +++++.+........ .+++..
T Consensus 196 ~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~~~ 274 (431)
T 3ht4_A 196 KEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGASLY 274 (431)
T ss_dssp HHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCCCS
T ss_pred HhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCccHH
Confidence 99 99999999999211100001112357999999999652 12333999999 799999887544221 122222
Q ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 130 CQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 130 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
...++...+. ....+.++..++...+.+.|++++
T Consensus 275 ~~~~~~~~l~---------~~~~~~~~~~~~a~~l~~~L~~~g 308 (431)
T 3ht4_A 275 SLQEMYQGFF---------LAPHVAGQALKGAIFTAAFLEKLG 308 (431)
T ss_dssp CSHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhHhh---------hHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1233444443 344567788899999999999876
No 227
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.45 E-value=4e-12 Score=118.23 Aligned_cols=241 Identities=8% Similarity=0.016 Sum_probs=141.1
Q ss_pred CCCcccchhhhhhccCccc-------ccc----c-----ChhhhcccCC--CCce--------EEEEcCCCCCChhhH--
Q 024997 1 MPFYPLYQEQTDYFESVDY-------KFE----G-----EANLWGNASS--DTHL--------VEFVTAPNNPDGQMN-- 52 (259)
Q Consensus 1 ~P~y~~~~~~~~~~g~~~~-------~~~----~-----d~~~l~~~~~--~~~~--------~i~i~~p~NPtG~~~-- 52 (259)
.|+|+.+...+...|.++. .|+ + |++.|++.++ ++++ ++++++| ||+|.+.
T Consensus 252 ~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl 330 (755)
T 2vyc_A 252 RNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNA 330 (755)
T ss_dssp SSCCHHHHHHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECH
T ss_pred CCchHHHHHHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCH
Confidence 3667776666777777642 122 3 8888988873 2443 8899998 7999997
Q ss_pred ---HHhhcCCCcEEEeecccc-----CCC---CCCC----CC-CCCCeEEEeccccccCCCcce-EEEEEecCHH---H-
Q 024997 53 ---KAVLKGPYAKSIYDHAYF-----WPH---FAPI----PA-PADEELMIFTISKLTGHAGSR-FGWAVIKDEA---V- 111 (259)
Q Consensus 53 ---~~la~~~~~~vi~De~y~-----~~~---~~~~----~~-~~~~~i~~~S~SK~~g~~G~R-~G~i~~~~~~---~- 111 (259)
.++|+++|+++++|++|. .+. ...+ .+ ..++++++.|+||.++ |.+ .|++++++ + +
T Consensus 331 ~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~-~~~~i~ 407 (755)
T 2vyc_A 331 KEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVRE-GRGAIN 407 (755)
T ss_dssp HHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEEC-CBTCCC
T ss_pred HHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECcccccc--CcCCeeeeeecC-cccccC
Confidence 389999999999999982 221 1111 12 2345779999999874 555 57777764 3 1
Q ss_pred HHHHHHhhh-hhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCC---------Cccccccc
Q 024997 112 YQRMSAYIS-LNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNR---------FSLQEIAP 181 (259)
Q Consensus 112 ~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~ 181 (259)
...+..... ..+..++.+..++...+++.. ...-..++.+++.++.+.+++.|+++++ +.+ +.+
T Consensus 408 ~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l----~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~--~~~ 481 (755)
T 2vyc_A 408 FSRFNQAYMMHATTSPLYAICASNDVAVSMM----DGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKP--WNK 481 (755)
T ss_dssp HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH----STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEE--SSC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH----HhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeec--cCc
Confidence 123333222 223345555444444444432 1111344566777777777777776654 211 111
Q ss_pred ccc-----------------------ccceeeCC---------CCC------eeEEEecCC-----------CchHHHHH
Q 024997 182 QYC-----------------------TYFKKIRP---------PSP------AYAWVKCER-----------EEDKDCYG 212 (259)
Q Consensus 182 ~~~-----------------------~~~~~~~~---------~~~------~~~~~~~~~-----------~~~~~~~~ 212 (259)
... .+|...+. ..+ .-+.+.++. .+...+.+
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~ 561 (755)
T 2vyc_A 482 EVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTA 561 (755)
T ss_dssp SEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHH
T ss_pred hhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHH
Confidence 000 00100000 011 233454542 12366777
Q ss_pred HHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 213 ILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 213 ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.|+++||.+.. .+.+.+|++++. ++++++.+++.|.++.
T Consensus 562 ~L~~~gI~~e~-----~~~~~v~~~~~~g~t~~~~~~l~~al~~~~ 602 (755)
T 2vyc_A 562 WLGRHGIVPTR-----TTDFQIMFLFSMGVTRGKWGTLVNTLCSFK 602 (755)
T ss_dssp HHHTTTCCCSE-----ECSSEEEEECCTTCCTTTTHHHHHHHHHHH
T ss_pred HHHHCCCEEee-----cCCCeEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 78789987754 246889999865 8888998888888764
No 228
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.36 E-value=1.6e-11 Score=105.66 Aligned_cols=209 Identities=13% Similarity=0.028 Sum_probs=132.4
Q ss_pred cChhhhcccCCCCceEEEEcCCCCCChhh-H--HHhhcCCCcEEEeeccc-cCCCCCCCCCCCCCeEEEeccccccCCCc
Q 024997 23 GEANLWGNASSDTHLVEFVTAPNNPDGQM-N--KAVLKGPYAKSIYDHAY-FWPHFAPIPAPADEELMIFTISKLTGHAG 98 (259)
Q Consensus 23 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~-~--~~la~~~~~~vi~De~y-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 98 (259)
++++.++..++++++++.+++-+|.||.+ . .+++ +|+++++|.++ ++.....+ +..+ +.+.|..|.+|.+|
T Consensus 154 ~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~--~g~~~~vDa~qs~g~~pidv-~~~~--~~~~s~hK~lGP~G 228 (386)
T 3qm2_A 154 AVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG--PEVVVTADFSSTILSAPLDV-SRYG--VIYAGAQKNIGPAG 228 (386)
T ss_dssp EECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC--TTCCEEEECTTTTTSSCCCG-GGCS--EEEEETTTTTCCTT
T ss_pred CCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc--CCCEEEEEcccccCCCCCCc-cccC--EEEEecccccCCCc
Confidence 67778888888999998999888999997 4 3555 79999999977 22111122 2223 56789999999999
Q ss_pred ceEEEEEecCHHHHHHHH--------------HhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 99 SRFGWAVIKDEAVYQRMS--------------AYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 99 ~R~G~i~~~~~~~~~~~~--------------~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+|++++. +++++.+. ......+.+++. -.++.++++...+ ..-++...++.++..+++
T Consensus 229 --~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~--i~~l~~Al~~~~~---~gG~~~i~~~~~~l~~~l 300 (386)
T 3qm2_A 229 --LTLVIVR-EDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFA--WYLSGLVFKWLKA---QGGVAAMHKINQQKAELL 300 (386)
T ss_dssp --EEEEEEE-GGGCSCCCTTSCGGGCHHHHHHC-------CCSH--HHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHH
T ss_pred --cEEEEEC-HHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHH--HHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHH
Confidence 8999988 46532111 011122323333 3344445543211 002566777888888888
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC--CchHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER--EEDKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK-- 240 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~-- 240 (259)
.+.|++++.+... .. ....++..+.+.+++ .+ +.+...|+++||.+++|...- +.+|+|+..
T Consensus 301 ~~~l~~~~~~~~~-~~---------~~~rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~g~~~~---~~iRiS~~~~~ 366 (386)
T 3qm2_A 301 YGVIDNSDFYRND-VA---------QANRSRMNVPFQLADNTLD-KVFLEESFAAGLHALKGHRVV---GGMRASIYNAM 366 (386)
T ss_dssp HHHHHTCSSEECC-BC---------GGGBCSSEEEEEESSGGGH-HHHHHHHHHTTEECCBCCTTT---CSEEEECCTTS
T ss_pred HHHHHHCCCcccC-CC---------HHHcCceEEEEECCCcccc-HHHHHHHHHCCCEEeCCCCCc---CeEEEEcCCCC
Confidence 8888876421110 00 012334455666663 23 344445778999998876542 459999976
Q ss_pred ChhhHHHHHHHHHHHhhh
Q 024997 241 SQDDFDLLLHRLDELISK 258 (259)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~ 258 (259)
+.++++.+++.|+++.++
T Consensus 367 t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 367 PIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999998764
No 229
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.29 E-value=7e-12 Score=117.52 Aligned_cols=198 Identities=15% Similarity=0.148 Sum_probs=120.6
Q ss_pred CceEEEEcCC--CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----CCCCCeEEEeccccccCCC
Q 024997 35 THLVEFVTAP--NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----APADEELMIFTISKLTGHA 97 (259)
Q Consensus 35 ~~~~i~i~~p--~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~~~~~~i~~~S~SK~~g~~ 97 (259)
++.+ |+..| ++..|.+. .++|++||+++|+||++ |+.-...+. +..+ + +.++||.++ .
T Consensus 594 ~iaa-vi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~P-D--iitlsK~L~-g 668 (831)
T 4a0g_A 594 HVGA-LIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKP-D--IACFAKLLT-G 668 (831)
T ss_dssp EEEE-EEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCC-S--EEEECGGGG-T
T ss_pred cEEE-EEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCC-c--EEEEecccc-c
Confidence 3555 55556 67777665 28999999999999998 422111111 2222 2 348999997 5
Q ss_pred c-ceEEEEEecCHHHHHHHHHh------hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH-HHHHHHHHH
Q 024997 98 G-SRFGWAVIKDEAVYQRMSAY------ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR-WENLSKIIS 169 (259)
Q Consensus 98 G-~R~G~i~~~~~~~~~~~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 169 (259)
| +++|+++++ +++.+.+... ....+++.+++.++++.+.|+...++...+.+.+..+.+++. .+.+.+.++
T Consensus 669 G~~Plgav~~~-~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~ 747 (831)
T 4a0g_A 669 GMVPLAVTLAT-DAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQIS 747 (831)
T ss_dssp TSSCCEEEEEC-HHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHH
T ss_pred CccCcEEEEEC-HHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 899999999 7999987642 134568889999999998888653221111111111111110 112333444
Q ss_pred hcCCCccccccccccccceeeCCCCCeeEEEecCCC---------chHHHHHHHHHcCeeeecCCcccCCCCeEEEEe--
Q 024997 170 LSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE---------EDKDCYGILKAAKIIGREGKKFRAEARFVRLSL-- 238 (259)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~-- 238 (259)
+.+. +..+... |.+..+.+... ....+...+.++||.++|+ .+.+||+.
T Consensus 748 ~~~~-------------v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~------g~~lrl~pp~ 807 (831)
T 4a0g_A 748 SHSA-------------VQRVVVI-GTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL------GNVIYLMCGP 807 (831)
T ss_dssp HSTT-------------EEEEEEE-TTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB------TTEEEEECCT
T ss_pred hCCC-------------ceeEeec-ccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec------CCEEEEECCC
Confidence 4432 2233333 33344444211 1233444555789999973 27899995
Q ss_pred ecChhhHHHHHHHHHHHhhh
Q 024997 239 LKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~ 258 (259)
..+++++++++++|.+++++
T Consensus 808 ~~t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 808 CTSPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp TCCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 34999999999999998864
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.19 E-value=1.7e-10 Score=101.27 Aligned_cols=202 Identities=13% Similarity=0.009 Sum_probs=123.3
Q ss_pred CceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCeEEEeccccccCCC
Q 024997 35 THLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEELMIFTISKLTGHA 97 (259)
Q Consensus 35 ~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~i~~~S~SK~~g~~ 97 (259)
+..+ +|..| +.-.|.+. .++|+++|+++|.||++ |+.....+. + .+| +-+++|.+| .
T Consensus 226 ~iAA-vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PD----ivt~gK~lg-g 299 (456)
T 4atq_A 226 QVAA-IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPD----IITMAKGIA-G 299 (456)
T ss_dssp GEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS----EEEECGGGG-T
T ss_pred ceEE-EEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCc----hhhhhhccc-C
Confidence 4556 55555 33334333 39999999999999998 422111111 1 222 557889997 8
Q ss_pred cceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 024997 98 GSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQ 177 (259)
Q Consensus 98 G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 177 (259)
|+.+|.+++. +++.+.+.......+++.+++.-+++.+.|+...++ +. .++.++.-+++.+.|+++. .
T Consensus 300 g~P~~av~~~-~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~---~l----~~~~~~~g~~l~~~L~~l~----~ 367 (456)
T 4atq_A 300 GLPLSAITGR-ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQH---DL----NGRARHIEELALGKLRELA----A 367 (456)
T ss_dssp TSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHT---TH----HHHHHHHHHHHHHHHHHHH----H
T ss_pred cCCceeeEec-HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhc---cH----HHHHHHHHHHHHHHHHHHH----H
Confidence 8999999999 799988877666778999999999999998865322 22 3334444444444444332 1
Q ss_pred cccccccccceeeCCCCCeeEEEecCCC-----c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHH
Q 024997 178 EIAPQYCTYFKKIRPPSPAYAWVKCERE-----E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDL 247 (259)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~ 247 (259)
.++....+.+..+... |+++-+++... + ...+...+.++|+.+.+. +...+.+||+.. .+++++++
T Consensus 368 ~~~~~~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~---g~~~~~irl~PpL~it~~~id~ 443 (456)
T 4atq_A 368 ELSAGGGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTC---GTYGNVIRLLPPLVISDELLID 443 (456)
T ss_dssp HCC-----CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEE---CTTSCEEEECCCTTCCHHHHHH
T ss_pred hcccccCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEec---CCCCCEEEEECCCCCCHHHHHH
Confidence 1111111112222333 33444444221 1 233444455789998863 233478999863 38999999
Q ss_pred HHHHHHHHhhh
Q 024997 248 LLHRLDELISK 258 (259)
Q Consensus 248 ~~~~l~~~l~~ 258 (259)
++++|.+.|+.
T Consensus 444 ~l~~l~~al~a 454 (456)
T 4atq_A 444 GLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.16 E-value=1.4e-10 Score=101.58 Aligned_cols=204 Identities=15% Similarity=0.119 Sum_probs=123.4
Q ss_pred cChhhhcccCC---CCceEEEEcCC-CCCChhhH---------HHhhcCCCcEEEeecccc---CCCCCC--CCCCCCCe
Q 024997 23 GEANLWGNASS---DTHLVEFVTAP-NNPDGQMN---------KAVLKGPYAKSIYDHAYF---WPHFAP--IPAPADEE 84 (259)
Q Consensus 23 ~d~~~l~~~~~---~~~~~i~i~~p-~NPtG~~~---------~~la~~~~~~vi~De~y~---~~~~~~--~~~~~~~~ 84 (259)
.|.+.+++.+. +++.+ ||..| ....|.+. .++|+++|+++|.||++- +..+.. ..-.+|
T Consensus 205 nd~~~l~~~l~~~~~~iAa-vIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PD-- 281 (454)
T 4ao9_A 205 NDAQTARAQIERHGPEIAV-VLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSD-- 281 (454)
T ss_dssp TCHHHHHHHHHHTGGGEEE-EEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCS--
T ss_pred chHHHHHHHHhhcCCceEE-EEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCc--
Confidence 35566777662 35666 44455 44455544 289999999999999982 111100 001222
Q ss_pred EEEeccccccCCCcceEEEEEecCHHHHHHHHHh----hhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 024997 85 LMIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAY----ISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKR 160 (259)
Q Consensus 85 i~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+-+++|.+| .|+.+|.+.+. +++.+.+... ....+++.+++..+++.+.|+.. ..+ +..++++++
T Consensus 282 --i~t~gK~lg-gG~Piga~~~~-~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l---~~~----~~~~~~~~~ 350 (454)
T 4ao9_A 282 --LTTLGKYIG-GGMSFGAFGGR-ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKL---FTP----EAAGALAER 350 (454)
T ss_dssp --EEEEEGGGG-TTSSCEEEEEC-HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHT---SCH----HHHHHHHHH
T ss_pred --EEEeccccC-CCCcceeeeeH-HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHH---hcc----ChhHHHHHH
Confidence 458999998 78999999999 7999877542 23356778899999998888864 122 335556666
Q ss_pred HHHHHHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCC-----------Cch----HHHHHHHHHcCeeeecCC
Q 024997 161 WENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCER-----------EED----KDCYGILKAAKIIGREGK 225 (259)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~----~~~~~ll~~~gi~~~~g~ 225 (259)
-+++.+.|+++.. ..+ . ...+...|.+ +-+.+.. .+. .++..++ ++||.+.|
T Consensus 351 g~~l~~~L~~l~~----~~~---~--~~~vrg~G~m-~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p-- 417 (454)
T 4ao9_A 351 GEALRARLNALCA----NEG---V--AMQFTGIGSL-MNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSP-- 417 (454)
T ss_dssp HHHHHHHHHHHHH----HHT---B--SCEEEEETTE-EEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCT--
T ss_pred HHHHHHHHHHHHh----hCC---C--CEEEeeeceE-EEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcC--
Confidence 6666666654320 000 0 1111222222 1222211 111 2333444 67999876
Q ss_pred cccCCCCeEEEEeecChhhHHHHHHHHHHHhhh
Q 024997 226 KFRAEARFVRLSLLKSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 226 ~f~~~~~~~Ris~~~~~~~~~~~~~~l~~~l~~ 258 (259)
.+.+.++...++++++++++++++++++
T Consensus 418 -----~~~~~~s~~~T~~dId~~l~al~~~l~~ 445 (454)
T 4ao9_A 418 -----RGFVVLSLPLTDADIDRYVAAIGSFIGG 445 (454)
T ss_dssp -----TCEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 2445666666999999999999999874
No 232
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.07 E-value=8e-09 Score=94.97 Aligned_cols=161 Identities=11% Similarity=0.001 Sum_probs=98.1
Q ss_pred CCcccchhhhhhccCccc-------ccc----c-----ChhhhcccCC--CCce---EEEEcCCCCCChhhH-----HHh
Q 024997 2 PFYPLYQEQTDYFESVDY-------KFE----G-----EANLWGNASS--DTHL---VEFVTAPNNPDGQMN-----KAV 55 (259)
Q Consensus 2 P~y~~~~~~~~~~g~~~~-------~~~----~-----d~~~l~~~~~--~~~~---~i~i~~p~NPtG~~~-----~~l 55 (259)
|+|..+....++.|+.+. .|. + |++.|++.+. ++++ ++++++| ||+|.++ .++
T Consensus 243 ~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~el 321 (715)
T 3n75_A 243 NCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKT 321 (715)
T ss_dssp SCCHHHHHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHH
T ss_pred CccHHHHHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHH
Confidence 567777777777777652 233 2 7888998883 3334 7899999 9999998 267
Q ss_pred hcCCCcEEEeecccc-----CCCCC---CCCC--CCCCe-EEEeccccccCCCcc-eEEEEEecCHHH-HHHHHHhhhhh
Q 024997 56 LKGPYAKSIYDHAYF-----WPHFA---PIPA--PADEE-LMIFTISKLTGHAGS-RFGWAVIKDEAV-YQRMSAYISLN 122 (259)
Q Consensus 56 a~~~~~~vi~De~y~-----~~~~~---~~~~--~~~~~-i~~~S~SK~~g~~G~-R~G~i~~~~~~~-~~~~~~~~~~~ 122 (259)
|++++ +++||+|. .+... .+.. ..+.+ ++++|+||+++. + ..|++++++ ++ .+.+.......
T Consensus 322 a~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~g--ltqgs~i~v~~-~i~~~~~~~~~~~~ 396 (715)
T 3n75_A 322 LDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA--FSQASMIHVKG-DVNEETFNEAYMMH 396 (715)
T ss_dssp CCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSC--CTTCEEEEEES-CCCHHHHHHHHHHT
T ss_pred hCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccC--CCCeeEEEeCc-hhhHHHHHHHHHhh
Confidence 77663 78999982 22111 1211 12443 569999999863 2 248888874 42 22344333322
Q ss_pred -cCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcC
Q 024997 123 -TMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSN 172 (259)
Q Consensus 123 -~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (259)
+.+++.+..++...+++... ...-.++++++.++.+.+++.|++++
T Consensus 397 ~STSpsy~~~AsldaA~~~~~----~~~g~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 397 TTTSPHYGIVASTETAAAMMK----GNAGKRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp SCSSCCHHHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHH----hhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 34566655555444544220 01233456777788888888887765
No 233
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.01 E-value=4.9e-09 Score=92.40 Aligned_cols=175 Identities=14% Similarity=0.099 Sum_probs=112.5
Q ss_pred HhhcCCCcEEEeeccc--cCCCCCCCC----C-CCCCeEEEeccccccCCCc-ceEEEEEecCHHHHHHHHHhh------
Q 024997 54 AVLKGPYAKSIYDHAY--FWPHFAPIP----A-PADEELMIFTISKLTGHAG-SRFGWAVIKDEAVYQRMSAYI------ 119 (259)
Q Consensus 54 ~la~~~~~~vi~De~y--~~~~~~~~~----~-~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~~~~~~~------ 119 (259)
++|+++|+++|.||++ |+.-...+. + .+| +-+++|.++ .| +.+|.+++. +++.+.+....
T Consensus 264 ~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD----i~t~~K~l~-gG~~Pl~av~~~-~~i~~~~~~~~~~~~~~ 337 (473)
T 4e3q_A 264 PILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPD----AIISSKNLT-AGFFPMGAVILG-PELSKRLETAIEAIEEF 337 (473)
T ss_dssp HHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCS----EEEECGGGG-TTSSCCEEEEEC-HHHHHHHHHHHHHHSCC
T ss_pred HHhcccceEEeccCccccCCcccchhHHHhcCCCCC----hHHhccccc-CCCCCccccccc-HHHHHHhcccccccccc
Confidence 8999999999999999 532221111 1 223 557899997 56 899999999 69998886532
Q ss_pred -hhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccceeeCCCCCeeE
Q 024997 120 -SLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYA 198 (259)
Q Consensus 120 -~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (259)
...+++.+++.-+++.+.|+...+ ++. .++.++.-+++.+.|+++... + .+..+...| ++.
T Consensus 338 ~hg~T~~Gnpla~Aaala~L~~i~~---~~l----~~~~~~~g~~l~~~L~~l~~~-----~-----~v~~vRG~G-l~~ 399 (473)
T 4e3q_A 338 PHGFTASGHPVGCAIALKAIDVVMN---EGL----AENVRRLAPRFEERLKHIAER-----P-----NIGEYRGIG-FMW 399 (473)
T ss_dssp CCCCTTTTCHHHHHHHHHHHHHHHH---SSH----HHHHHHHHHHHHHHHHHHTTS-----T-----TEEEEEEET-TEE
T ss_pred ccCCCCCCCcchhhhhhhhhhhhcc---ccH----HHHHHHHHHHHHHHHHHHhcC-----C-----CeeEEeecc-eEE
Confidence 345778899988888888886532 232 445555666666666655321 0 022223222 222
Q ss_pred EEecCC-C--------c---hHHHHHHHHHcCeeeecCCcccCCCCeEEEEee--cChhhHHHHHHHHHHHhhh
Q 024997 199 WVKCER-E--------E---DKDCYGILKAAKIIGREGKKFRAEARFVRLSLL--KSQDDFDLLLHRLDELISK 258 (259)
Q Consensus 199 ~~~~~~-~--------~---~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~--~~~~~~~~~~~~l~~~l~~ 258 (259)
-+.+.. . + ...+...+.++|+.++|. + +.+|++.. .++++++++++++.+.+++
T Consensus 400 gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----g-~~i~l~PPL~it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 400 ALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL-----G-QSVVLCPPFILTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp EEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE-----T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec-----C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 333211 0 1 234555555789999872 2 67888753 3899999999999888764
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.90 E-value=9.5e-08 Score=82.40 Aligned_cols=213 Identities=14% Similarity=0.086 Sum_probs=141.2
Q ss_pred cccChhhhcccCC-CCceEEEEcCCCCCChhhH---HHhhcCCCcEEEeecccc-----CC-CCCCCCCCCCCeEEEecc
Q 024997 21 FEGEANLWGNASS-DTHLVEFVTAPNNPDGQMN---KAVLKGPYAKSIYDHAYF-----WP-HFAPIPAPADEELMIFTI 90 (259)
Q Consensus 21 ~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~---~~la~~~~~~vi~De~y~-----~~-~~~~~~~~~~~~i~~~S~ 90 (259)
..+|.+++++... .++++|++-.=.+|-=.-+ .++|.+.|+++++|-+++ +. ...+++ ...++..|.
T Consensus 188 ~~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~---~ADvVTtTT 264 (490)
T 3ou5_A 188 GLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---HADIVTTTT 264 (490)
T ss_dssp TEECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEES
T ss_pred CcccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc---cceEEeccc
Confidence 3588888888874 4899966655556665555 489999999999999994 21 222232 247889999
Q ss_pred ccccCCCcceEEEEEecCH--------------HHHHHHHHhhhhhcCCCCHHHHHHHHHH-HHHHHhcCCcchHHHHHH
Q 024997 91 SKLTGHAGSRFGWAVIKDE--------------AVYQRMSAYISLNTMGVSRECQLRAFKL-LKVVLEDGGNNIFEFGYN 155 (259)
Q Consensus 91 SK~~g~~G~R~G~i~~~~~--------------~~~~~~~~~~~~~~~~~~~~~q~~~~~~-l~~~~~~~~~~~~~~~~~ 155 (259)
.|+| .|=|-|.|.+.+. ++.+++....-+...+.+.....++.++ +.+. ....+.+..+
T Consensus 265 HKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea----~~p~fk~Ya~ 338 (490)
T 3ou5_A 265 HKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA----CTPMFREYSL 338 (490)
T ss_dssp SSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH----HSHHHHHHHH
T ss_pred cccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHH----HhHhHHHHHH
Confidence 9998 3556699987731 4666777665555556555444443332 3322 2335667788
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccceeeCC-CCCeeEEEecCCC--chHHHHHHHHHcCeeee----cCCccc
Q 024997 156 TMKKRWENLSKIISLSNRFSLQEIAPQYCTYFKKIRP-PSPAYAWVKCERE--EDKDCYGILKAAKIIGR----EGKKFR 228 (259)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ll~~~gi~~~----~g~~f~ 228 (259)
++.+|.+.|.+.|.+.+ ++.+.. ...=.+++++... +...+...|++.||.+. |++.-.
T Consensus 339 qVv~NAkaLA~~L~~~G--------------~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp 404 (490)
T 3ou5_A 339 QVLKNARAMADALLERG--------------YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSA 404 (490)
T ss_dssp HHHHHHHHHHHHHHHTT--------------CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCS
T ss_pred HHHHHHHHHHHHHHhCC--------------CeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCC
Confidence 89999999999998866 332221 1122566777543 57889999999999764 544211
Q ss_pred CCCCeEEEEe------ecChhhHHHHHHHHHHHh
Q 024997 229 AEARFVRLSL------LKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 229 ~~~~~~Ris~------~~~~~~~~~~~~~l~~~l 256 (259)
..+..+||+. +..++++++..+-|.+++
T Consensus 405 ~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 405 ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 1356899997 226788888877777665
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.69 E-value=4.7e-07 Score=78.44 Aligned_cols=219 Identities=12% Similarity=0.077 Sum_probs=125.6
Q ss_pred cccChhhhcccCC---CCceEEEEcCC-CCCChhhH-----HHhhcCCCcEEEeeccccCCC--CCCCC----CCCCCeE
Q 024997 21 FEGEANLWGNASS---DTHLVEFVTAP-NNPDGQMN-----KAVLKGPYAKSIYDHAYFWPH--FAPIP----APADEEL 85 (259)
Q Consensus 21 ~~~d~~~l~~~~~---~~~~~i~i~~p-~NPtG~~~-----~~la~~~~~~vi~De~y~~~~--~~~~~----~~~~~~i 85 (259)
..+|++.+++++. .+..++++++| .|-.|.+- +++|+++|+++++|+||+... ...++ ....-++
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~ 277 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDA 277 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCE
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcE
Confidence 5788899998883 23444444444 45333322 499999999999999993111 11111 1123578
Q ss_pred EEeccccccCCC-cceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHA-GSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENL 164 (259)
Q Consensus 86 ~~~S~SK~~g~~-G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
++.|..|.+-++ | -|.+...++++.+++..... ... .+.+.....+..+.- +.+-+.+..++-.++.+.+
T Consensus 278 vVqS~HK~llvpIG--G~ii~~~d~e~l~~~~~~yP-Gr~-S~Spsldl~~tLL~l-----Gr~Gy~~ll~e~~ela~~L 348 (501)
T 3hl2_A 278 FVQSLDKNFMVPVG--GAIIAGFNDSFIQEISKMYP-GRA-SASPSLDVLITLLSL-----GSNGYKKLLKERKEMFSYL 348 (501)
T ss_dssp EEEEHHHHHCCCSS--CEEEEESCHHHHHHHHHTSC-SCB-CSHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccceeecC--ceEEEeCCHHHHHHHHHhCC-CCC-CCcHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 999999998544 3 24444566788887644221 112 233333233333332 2234566777777888888
Q ss_pred HHHHHhcCCCccccccccccccceeeCCCCCeeEEEecCCC------chHHHHHHHHHcCee----eecCC---------
Q 024997 165 SKIISLSNRFSLQEIAPQYCTYFKKIRPPSPAYAWVKCERE------EDKDCYGILKAAKII----GREGK--------- 225 (259)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~----~~~g~--------- 225 (259)
.+.|+++.. ...+.. . ..+...+-+.+.+... +...+-.+|=..+|. |.+|.
T Consensus 349 ~~~L~~la~----~~ge~l---l--~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f 419 (501)
T 3hl2_A 349 SNQIKKLSE----AYNERL---L--HTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTF 419 (501)
T ss_dssp HHHHHHHHH----TTTCCB---C--CCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEE
T ss_pred HHHHHHHHH----hcChhh---c--CCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeee
Confidence 888887653 111100 0 1344555566666543 122333334345662 44555
Q ss_pred -cccC-----CCCeEEEEe--ecChhhHHHHHHHHHHHhh
Q 024997 226 -KFRA-----EARFVRLSL--LKSQDDFDLLLHRLDELIS 257 (259)
Q Consensus 226 -~f~~-----~~~~~Ris~--~~~~~~~~~~~~~l~~~l~ 257 (259)
.|+. +-.|+-++- +.+.++++..+++|.+.+.
T Consensus 420 ~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~ 459 (501)
T 3hl2_A 420 RGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLK 459 (501)
T ss_dssp SSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 5552 345666664 3499999999999998875
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.22 E-value=2.2e-05 Score=68.25 Aligned_cols=144 Identities=9% Similarity=-0.001 Sum_probs=84.4
Q ss_pred cccChhhhcccCCC---CceEEEEcCCC-CCChhhH-----HHhhcCCCcEEEeeccccCC--CCCCCC----CCCCCeE
Q 024997 21 FEGEANLWGNASSD---THLVEFVTAPN-NPDGQMN-----KAVLKGPYAKSIYDHAYFWP--HFAPIP----APADEEL 85 (259)
Q Consensus 21 ~~~d~~~l~~~~~~---~~~~i~i~~p~-NPtG~~~-----~~la~~~~~~vi~De~y~~~--~~~~~~----~~~~~~i 85 (259)
..+|++.|++++.+ +.+++|+.+|+ +.+|.+- +++|+++|+++++|+||... ....++ ....-+.
T Consensus 180 ~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~ 259 (450)
T 3bc8_A 180 LRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDA 259 (450)
T ss_dssp EECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCE
T ss_pred CCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCE
Confidence 57889999999832 34566777775 5566543 49999999999999999311 111111 1124477
Q ss_pred EEeccccccCCCcceEEEEEecCHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 024997 86 MIFTISKLTGHAGSRFGWAVIKDEAVYQRMSAYISLNTMGVSRECQLRAFKLLKVVLEDGGNNIFEFGYNTMKKRWENLS 165 (259)
Q Consensus 86 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
++.|..|.++.+ ...+++...+++..+++..... ....+.+........+.. +.+-+.+..++..++.+.+.
T Consensus 260 ~v~S~HK~l~a~-~~~~~l~~rd~~~~~~~~~~~~--g~~s~SpsL~l~~~l~~~-----G~~g~~~~i~~~~~~a~~l~ 331 (450)
T 3bc8_A 260 FVQSLDKNFMVP-VGGAIIAGFNEPFIQDISKMYP--GRASASPSLDVLITLLSL-----GCSGYRKLLKERKEMFVYLS 331 (450)
T ss_dssp EEEEHHHHHSCC-SSCEEEEESCHHHHHHHHHHSC--SCBCSHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCccCCCch-hccEEEEecCHHHHHHHHHHhh--cCCcccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 889999998632 2256666655777776654321 112233333322222221 22234444455566667777
Q ss_pred HHHHhcC
Q 024997 166 KIISLSN 172 (259)
Q Consensus 166 ~~l~~~~ 172 (259)
+.+++++
T Consensus 332 ~~l~~~~ 338 (450)
T 3bc8_A 332 TQLKKLA 338 (450)
T ss_dssp HHHHHHH
T ss_pred HHHHhhH
Confidence 7777665
No 237
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=33.85 E-value=65 Score=18.09 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=17.7
Q ss_pred CeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 232 RFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 232 ~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
..+|||+.. +..+-++....|-+++.
T Consensus 2 ervrisitartkkeaekfaailikvfa 28 (62)
T 2gjh_A 2 ERVRISITARTKKEAEKFAAILIKVFA 28 (62)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecchhHHHHHHHHHHHHHH
Confidence 358999966 77776666666655543
No 238
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=30.03 E-value=1.3e+02 Score=20.51 Aligned_cols=47 Identities=9% Similarity=0.031 Sum_probs=33.7
Q ss_pred hHHHHHHHHHcCeeeecCCcccCCCCeEEEEeec--ChhhHHHHHHHHHHHh
Q 024997 207 DKDCYGILKAAKIIGREGKKFRAEARFVRLSLLK--SQDDFDLLLHRLDELI 256 (259)
Q Consensus 207 ~~~~~~ll~~~gi~~~~g~~f~~~~~~~Ris~~~--~~~~~~~~~~~l~~~l 256 (259)
.+....+.+..| +.||.+++. ..|+-+.+.. +++++.++++.-.+++
T Consensus 68 Pe~~~~Lr~~~~--i~PayhmnK-~hWisv~Ld~~v~d~~i~~lI~~Sy~Lv 116 (125)
T 2kfp_A 68 PELVGSLRKKPG--IYPAYHMNK-EHWITVLLNGPLGAKEIHSLIEDSFQLT 116 (125)
T ss_dssp TTTHHHHHHSTT--EEECSSSCS-SSEEEEETTTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCC--CCccccCCC-CCeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 456666666666 678888875 4899888853 7888888887665543
No 239
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=22.54 E-value=1.5e+02 Score=18.46 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=19.2
Q ss_pred CCCeEEEEeec-ChhhHHHHHHHHHHHhh
Q 024997 230 EARFVRLSLLK-SQDDFDLLLHRLDELIS 257 (259)
Q Consensus 230 ~~~~~Ris~~~-~~~~~~~~~~~l~~~l~ 257 (259)
+...+|||+.. +..+-++....|-+++.
T Consensus 44 gakrvrisitartkkeaekfaailikvfa 72 (106)
T 1qys_A 44 GAKRVRISITARTKKEAEKFAAILIKVFA 72 (106)
T ss_dssp CCSEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEecchhHHHHHHHHHHHHHH
Confidence 45679999966 77776666666655543
No 240
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=22.16 E-value=1.1e+02 Score=20.82 Aligned_cols=51 Identities=2% Similarity=-0.048 Sum_probs=36.0
Q ss_pred chHHHHHHHHHcCeeeecCCcccC--CCCeEEEEeecChhhHHHHHHHHHHHh
Q 024997 206 EDKDCYGILKAAKIIGREGKKFRA--EARFVRLSLLKSQDDFDLLLHRLDELI 256 (259)
Q Consensus 206 ~~~~~~~ll~~~gi~~~~g~~f~~--~~~~~Ris~~~~~~~~~~~~~~l~~~l 256 (259)
..+.+.+.|.+.|+...-.+..+. .++..+|-++-++++.++.++.|.+..
T Consensus 17 kld~V~~AL~~~G~~~t~v~~~gGf~r~g~~~leivV~De~Vd~vi~~I~~~a 69 (114)
T 3m05_A 17 DANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKAS 69 (114)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEeccccccCCEEEEEEEcHHHHHHHHHHHHHHc
Confidence 467788888889986533222221 234678888778999999999998764
Done!