Query 024998
Match_columns 259
No_of_seqs 120 out of 1125
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 09:08:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02879 L-ascorbate peroxidas 100.0 1.3E-75 2.8E-80 519.7 22.9 248 1-258 2-249 (251)
2 PLN02364 L-ascorbate peroxidas 100.0 3E-75 6.4E-80 518.1 23.1 249 1-259 1-250 (250)
3 PLN02608 L-ascorbate peroxidas 100.0 2.8E-74 6E-79 519.1 23.3 244 5-258 3-246 (289)
4 PLN03030 cationic peroxidase; 100.0 6E-72 1.3E-76 510.4 16.8 236 2-258 31-310 (324)
5 cd00693 secretory_peroxidase H 100.0 1.6E-70 3.4E-75 499.6 19.1 236 2-258 8-285 (298)
6 cd00691 ascorbate_peroxidase A 100.0 9.2E-70 2E-74 484.4 21.9 232 8-258 12-252 (253)
7 cd00692 ligninase Ligninase an 100.0 1E-61 2.2E-66 444.6 21.6 229 20-258 21-277 (328)
8 cd00649 catalase_peroxidase_1 100.0 2.4E-59 5.1E-64 435.6 17.5 251 4-257 32-396 (409)
9 cd00314 plant_peroxidase_like 100.0 3E-58 6.5E-63 411.5 19.5 229 11-253 2-255 (255)
10 PF00141 peroxidase: Peroxidas 100.0 2E-59 4.3E-64 413.4 9.6 204 12-236 1-230 (230)
11 TIGR00198 cat_per_HPI catalase 100.0 7.5E-56 1.6E-60 435.4 17.1 247 7-256 45-402 (716)
12 PRK15061 catalase/hydroperoxid 100.0 7.5E-54 1.6E-58 419.2 17.6 247 4-253 44-403 (726)
13 cd08201 plant_peroxidase_like_ 100.0 7.9E-52 1.7E-56 367.3 14.6 216 28-253 37-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 8.6E-49 1.9E-53 351.8 19.0 227 14-255 14-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 3.5E-43 7.7E-48 345.9 19.7 229 12-255 430-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 3.5E-42 7.7E-47 337.3 20.1 227 14-255 439-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 9.6E-40 2.1E-44 307.7 14.8 247 6-255 59-416 (730)
18 COG0376 KatG Catalase (peroxid 99.8 1.2E-19 2.7E-24 172.1 12.7 226 14-254 449-724 (730)
19 cd00957 Transaldolase_TalAB Tr 41.7 29 0.00063 32.3 3.5 84 77-163 137-238 (313)
20 PRK12346 transaldolase A; Prov 41.2 30 0.00066 32.2 3.5 86 77-165 138-241 (316)
21 PTZ00411 transaldolase-like pr 38.3 40 0.00086 31.7 3.8 86 77-165 149-252 (333)
22 PRK13859 type IV secretion sys 34.2 26 0.00057 23.8 1.4 30 96-125 9-41 (55)
23 PRK12309 transaldolase/EF-hand 33.1 60 0.0013 31.1 4.2 86 77-165 143-246 (391)
24 PF08383 Maf_N: Maf N-terminal 32.4 33 0.00072 21.4 1.5 15 147-161 19-34 (35)
25 PRK05269 transaldolase B; Prov 31.5 33 0.00071 32.0 2.1 86 77-165 139-242 (318)
26 cd00439 Transaldolase Transald 29.6 27 0.00058 31.3 1.2 86 76-164 127-230 (252)
27 TIGR00874 talAB transaldolase. 28.8 48 0.001 30.9 2.7 86 77-165 137-240 (317)
28 cd07922 CarBa CarBa is the A s 25.9 44 0.00095 24.9 1.5 36 220-258 13-59 (81)
29 COG4982 3-oxoacyl-[acyl-carrie 22.0 24 0.00052 36.1 -0.6 54 129-203 693-747 (866)
30 PF09349 OHCU_decarbox: OHCU d 21.9 93 0.002 25.7 3.0 36 133-168 31-68 (159)
31 cd00490 Met_repressor_MetJ Met 20.9 73 0.0016 24.2 1.9 30 219-248 34-65 (103)
32 PRK05264 transcriptional repre 20.9 73 0.0016 24.3 1.9 30 219-248 35-66 (105)
No 1
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=1.3e-75 Score=519.68 Aligned_cols=248 Identities=72% Similarity=1.176 Sum_probs=239.9
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccChhhhhccccCchHHHHHH
Q 024998 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (259)
Q Consensus 1 ~~~~cp~~e~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (259)
|+|.||.+.+.+.++++++|++|++++.+..++|.+|||+||||+|||...++|||||||++.+|+++|+|.||+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~ 81 (251)
T PLN02879 2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL 81 (251)
T ss_pred CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHhHHhhCCCCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCCHHHHhhhh
Q 024998 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (259)
Q Consensus 81 i~~iK~~~~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~ 160 (259)
|++||+++++|||||||+||+++||+++|||.|+|++||+|+.+++++++||.|..++++|+..| +++||+++|||||+
T Consensus 82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVALs 160 (251)
T PLN02879 82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVF-GRMGLNDKDIVALS 160 (251)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCcccccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhccCCCcccccccccccCCCChHHHHHHhhhCHhHH
Q 024998 161 GGHTLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAF 240 (259)
Q Consensus 161 GaHtiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F 240 (259)
||||||++||. +.+++ ++|+.||.+|||+| |++|+.++.+|+++|+||++|+.|++|+++|++||.||+.|
T Consensus 161 GaHTiG~ah~~---r~g~~----g~~d~tp~~FDN~Y--y~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F 231 (251)
T PLN02879 161 GGHTLGRCHKE---RSGFE----GAWTPNPLIFDNSY--FKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAF 231 (251)
T ss_pred ccccccccccc---cccCC----CCCCCCccceeHHH--HHHHHcCCcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHH
Confidence 99999999997 56665 67999999999999 99999986679998999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCC
Q 024998 241 FADYAEAHLKLSELGFAE 258 (259)
Q Consensus 241 ~~~F~~Am~Km~~lgv~~ 258 (259)
+++|++||+||+++|+.+
T Consensus 232 ~~~Fa~Am~KL~~lg~~~ 249 (251)
T PLN02879 232 FEDYTEAHLKLSELGFAD 249 (251)
T ss_pred HHHHHHHHHHHHccCCCC
Confidence 999999999999999986
No 2
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=3e-75 Score=518.09 Aligned_cols=249 Identities=76% Similarity=1.207 Sum_probs=238.4
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccChhhhhccccCchHHHHHH
Q 024998 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (259)
Q Consensus 1 ~~~~cp~~e~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (259)
|+|+||.+.+.+.+++++++++|++++.++.++|.||||+||||++||.....|||||||.+++|+++++|.||.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (250)
T PLN02364 1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRL 80 (250)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHhHHhhCCCCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHh-cCCCHHHHhhh
Q 024998 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQ-MGLSDKDIVAL 159 (259)
Q Consensus 81 i~~iK~~~~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~-~Gls~~e~VaL 159 (259)
|+.||+++++|||||||+||||+||+++|||.|+|++||+|++++.++++||.|..++++|++.| ++ +|||++|||+|
T Consensus 81 i~~ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F-~~~~Gl~~~d~VaL 159 (250)
T PLN02364 81 LDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVF-AKQMGLSDKDIVAL 159 (250)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHH-HHhcCCCHHHheee
Confidence 99999999999999999999999999999999999999999999998889999999999999999 76 69999999999
Q ss_pred hcCcccccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhccCCCcccccccccccCCCChHHHHHHhhhCHhH
Q 024998 160 SGGHTLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDA 239 (259)
Q Consensus 160 ~GaHtiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~ 239 (259)
+||||||++||. +.++. ++|+.||.+|||+| |++|+.++.+|+++|+||++|+.|++|+.+|+.||.|++.
T Consensus 160 sGaHTiG~~hc~---r~~~~----g~~~~tp~~fDn~Y--y~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~ 230 (250)
T PLN02364 160 SGAHTLGRCHKD---RSGFE----GAWTSNPLIFDNSY--FKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDA 230 (250)
T ss_pred ecceeeccccCC---CCCCC----CCCCCCCCccchHH--HHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHH
Confidence 999999999996 45554 67889999999999 9999988667999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCC
Q 024998 240 FFADYAEAHLKLSELGFAEA 259 (259)
Q Consensus 240 F~~~F~~Am~Km~~lgv~~~ 259 (259)
|+++|++||+||+++|+.++
T Consensus 231 F~~~Fa~Am~Km~~lg~~~~ 250 (250)
T PLN02364 231 FFADYAEAHMKLSELGFADA 250 (250)
T ss_pred HHHHHHHHHHHHHccCCCCC
Confidence 99999999999999999864
No 3
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=2.8e-74 Score=519.06 Aligned_cols=244 Identities=65% Similarity=1.035 Sum_probs=233.7
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccChhhhhccccCchHHHHHHHHhH
Q 024998 5 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (259)
Q Consensus 5 cp~~e~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~i 84 (259)
.|.++..+.+.|+++|++|+++++++.++|.+|||+||||++||.+++.|||||||++.+|+++++|.||++++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~i 82 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPV 82 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HhhCCCCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCCHHHHhhhhcCcc
Q 024998 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (259)
Q Consensus 85 K~~~~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~GaHt 164 (259)
|+++|+|||||||+||||+||+++|||.|+|++||+|+++++++++||.|..+++++++.| +++||+++|||+|+||||
T Consensus 83 K~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F-~~~Gl~~~D~VaLsGAHT 161 (289)
T PLN02608 83 KAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVF-YRMGLSDKDIVALSGGHT 161 (289)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHH-HHcCCCHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999988889999999999999999 999999999999999999
Q ss_pred cccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhccCCCcccccccccccCCCChHHHHHHhhhCHhHHHHHH
Q 024998 165 LVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADY 244 (259)
Q Consensus 165 iG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F 244 (259)
||++||. +.+|. +||+.||.+|||+| |++|+.+..+|+++|+||++|+.|++|+++|+.||.|++.|+++|
T Consensus 162 iG~ahc~---r~g~~----g~~~~Tp~~FDN~Y--y~~ll~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~F 232 (289)
T PLN02608 162 LGRAHPE---RSGFD----GPWTKEPLKFDNSY--FVELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRDY 232 (289)
T ss_pred ccccccc---CCCCC----CCCCCCCCccChHH--HHHHHcCCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHHH
Confidence 9999997 44555 68889999999999 999998755699888999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCC
Q 024998 245 AEAHLKLSELGFAE 258 (259)
Q Consensus 245 ~~Am~Km~~lgv~~ 258 (259)
++||+||+++||.+
T Consensus 233 a~Am~Km~~lgvlt 246 (289)
T PLN02608 233 AESHKKLSELGFTP 246 (289)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999999875
No 4
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=6e-72 Score=510.41 Aligned_cols=236 Identities=27% Similarity=0.362 Sum_probs=216.1
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccCh---hhhhccccCchHHHH
Q 024998 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA---AEQAHSANNGLDIAV 78 (259)
Q Consensus 2 ~~~cp~~e~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~---~E~~~~~N~gl~~~~ 78 (259)
.++||++|+||+++|+++ +.+++.++|++|||+|||||+ +||||||+++ +|+++++|.+| ++|
T Consensus 31 ~~sCP~aE~iV~~~v~~~------~~~d~~~aa~llRL~FHDCfv-------~GCDaSvLl~~~~~Ek~a~~N~~l-~Gf 96 (324)
T PLN03030 31 STTCPQAESIVRKTVQSH------FQSNPAIAPGLLRMHFHDCFV-------RGCDASILIDGSNTEKTALPNLLL-RGY 96 (324)
T ss_pred hCcCCCHHHHHHHHHHHH------HhhCcccchhhhhhhhhhhee-------cCCceEEeeCCCcccccCCCCcCc-chH
Confidence 579999999999999999 999999999999999999998 9999999985 69999999999 589
Q ss_pred HHHHhHHhh----CC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC--CCCCCCCCCCChHHHHHHHHHhcCC
Q 024998 79 RLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--QEGRLPDAKQGNDHLRQVFGAQMGL 151 (259)
Q Consensus 79 ~~i~~iK~~----~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~--~~~~lP~p~~~~~~l~~~F~~~~Gl 151 (259)
++|+.||++ || +|||||||+||||+||+++|||.|+|++||+|+.+|. ...+||.|+.++++|++.| +++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F-~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF-AAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH-HHcCC
Confidence 999999975 88 8999999999999999999999999999999999874 3458999999999999999 99999
Q ss_pred CHHHHhhhhcCcccccccccccccCCCc-------------------ccCCCC-----------CCCCCccccCchhhhh
Q 024998 152 SDKDIVALSGGHTLVSAKLEGATRRGLD-------------------LRDHGP-----------ATLSFLTIPTSRMCHW 201 (259)
Q Consensus 152 s~~e~VaL~GaHtiG~~~~~~~~~~~~~-------------------l~~~~~-----------~~~tp~~fDN~Y~~y~ 201 (259)
+.+|||+||||||||++||.+|..+.|+ |+..|| +..||.+|||+| |+
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Y--y~ 253 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASF--FS 253 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHH--HH
Confidence 9999999999999999999988755442 344565 136899999999 99
Q ss_pred hHhhccCCCcccccccccccCCCChHHHHHHhhhCH----hHHHHHHHHHHHHHHhCCCCC
Q 024998 202 ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADE----DAFFADYAEAHLKLSELGFAE 258 (259)
Q Consensus 202 ~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~----~~F~~~F~~Am~Km~~lgv~~ 258 (259)
+|+.+ +|+|. |||+|+.|++|+++|++||.|+ +.|+++|++||+||++|||.+
T Consensus 254 nll~~--rGlL~--SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlT 310 (324)
T PLN03030 254 NLKNG--RGILE--SDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKT 310 (324)
T ss_pred HHHhc--CCCcC--CchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCC
Confidence 99999 89986 9999999999999999999875 599999999999999999975
No 5
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.6e-70 Score=499.65 Aligned_cols=236 Identities=33% Similarity=0.471 Sum_probs=217.9
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccCh------hhhhccccCchH
Q 024998 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA------AEQAHSANNGLD 75 (259)
Q Consensus 2 ~~~cp~~e~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~------~E~~~~~N~gl~ 75 (259)
.++||+||+||+++|+++ +.+++.++|++|||+||||++ +||||||+++ +|+++++|.+|
T Consensus 8 ~~sCP~~e~iV~~~v~~~------~~~~~~~a~~~lRl~FHDc~v-------~GcDaSill~~~~~~~~E~~~~~N~~l- 73 (298)
T cd00693 8 SKSCPNAESIVRSVVRAA------VKADPRLAAALLRLHFHDCFV-------RGCDASVLLDSTANNTSEKDAPPNLSL- 73 (298)
T ss_pred cCCCCChHHHHHHHHHHH------HHhCCCcCchhhhhhhHhhhc-------cCcceeEEecCCCCCchhccCCCCCCc-
Confidence 589999999999999998 999999999999999999998 8999999874 69999999999
Q ss_pred HHHHHHHhHHhh----CC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCC--CCCCCCCCCChHHHHHHHHHh
Q 024998 76 IAVRLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--EGRLPDAKQGNDHLRQVFGAQ 148 (259)
Q Consensus 76 ~~~~~i~~iK~~----~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~--~~~lP~p~~~~~~l~~~F~~~ 148 (259)
+++++|+.||++ || +|||||||+||+++||+++|||.|+|++||+|+.++.+ .+.||.|..+++++++.| ++
T Consensus 74 ~g~~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~ 152 (298)
T cd00693 74 RGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLF-AS 152 (298)
T ss_pred chhHHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHH-HH
Confidence 589999999975 77 89999999999999999999999999999999987753 368999999999999999 99
Q ss_pred cCCCHHHHhhhhcCcccccccccccccCCCc------------------ccCCCCCC-----------CCCccccCchhh
Q 024998 149 MGLSDKDIVALSGGHTLVSAKLEGATRRGLD------------------LRDHGPAT-----------LSFLTIPTSRMC 199 (259)
Q Consensus 149 ~Gls~~e~VaL~GaHtiG~~~~~~~~~~~~~------------------l~~~~~~~-----------~tp~~fDN~Y~~ 199 (259)
+||+++|||+|+||||||++||..|..+.|+ |+..||+. .||.+|||+|
T Consensus 153 ~G~~~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Y-- 230 (298)
T cd00693 153 KGLTVTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSY-- 230 (298)
T ss_pred cCCCHHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHH--
Confidence 9999999999999999999999988765331 55667764 7999999999
Q ss_pred hhhHhhccCCCcccccccccccCCCChHHHHHHhhhCHhHHHHHHHHHHHHHHhCCCCC
Q 024998 200 HWELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 258 (259)
Q Consensus 200 y~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~lgv~~ 258 (259)
|++|+.+ +|+|. ||++|+.|++|+++|++||.|++.|+++|+.||+||+++||.+
T Consensus 231 y~~l~~~--~glL~--SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~t 285 (298)
T cd00693 231 YKNLLAG--RGLLT--SDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT 285 (298)
T ss_pred HHHHHhc--ccCcc--CCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCcc
Confidence 9999998 88875 9999999999999999999999999999999999999999975
No 6
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=9.2e-70 Score=484.42 Aligned_cols=232 Identities=58% Similarity=0.934 Sum_probs=214.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccChhhhhccccCchHHHHHHHHhHHhh
Q 024998 8 VSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQ 87 (259)
Q Consensus 8 ~e~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~iK~~ 87 (259)
..++|+++|+++ +. ++.++|++|||+||||++||++.+.|||||++++.+|+++++|.+|.+++++|++||++
T Consensus 12 ~~~~V~~~v~~~------~~-~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~ 84 (253)
T cd00691 12 DLEAARNDIAKL------ID-DKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKK 84 (253)
T ss_pred HHHHHHHHHHHH------HH-cCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHH
Confidence 355677777655 44 99999999999999999999999999999999998999999999998899999999999
Q ss_pred CCCCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC---CCCCCCCCCCChHHHHHHHHHhcCCCHHHHhhhhcCcc
Q 024998 88 FPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---QEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (259)
Q Consensus 88 ~~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~---~~~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~GaHt 164 (259)
+|+|||||||+|||++||+.+|||.|+|++||+|+.++. ++++||.|+.+++++++.| +++||+++|||+|+||||
T Consensus 85 ~~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~d~VaLsGaHT 163 (253)
T cd00691 85 YPDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVF-YRMGFNDQEIVALSGAHT 163 (253)
T ss_pred cCCCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHH-HhcCCCHHHHHHhcccce
Confidence 999999999999999999999999999999999999986 5788999999999999999 999999999999999999
Q ss_pred cccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhccCCC------cccccccccccCCCChHHHHHHhhhCHh
Q 024998 165 LVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGEKDG------LLQLPSDKALLDDPVFRPLVEKYAADED 238 (259)
Q Consensus 165 iG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~~~g------ll~l~sD~~L~~d~~t~~~v~~yA~~~~ 238 (259)
||++||.. .+|. ++|+.||.+|||+| |++|+.+ +| ++.|+||++|+.|++|+++|++||.|++
T Consensus 164 iG~a~c~~---~~~~----g~~~~tp~~FDn~Y--y~~ll~~--~g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~ 232 (253)
T cd00691 164 LGRCHKER---SGYD----GPWTKNPLKFDNSY--FKELLEE--DWKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQD 232 (253)
T ss_pred eecccccC---CCCC----CCCCCCCCcccHHH--HHHHhcC--CCccCcCcceechhhHHHHcCccHHHHHHHHhhCHH
Confidence 99999973 3443 67788999999999 9999998 55 4456799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCC
Q 024998 239 AFFADYAEAHLKLSELGFAE 258 (259)
Q Consensus 239 ~F~~~F~~Am~Km~~lgv~~ 258 (259)
.|+++|++||+||+++||++
T Consensus 233 ~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 233 AFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred HHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999987
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1e-61 Score=444.60 Aligned_cols=229 Identities=29% Similarity=0.405 Sum_probs=197.8
Q ss_pred HHHhhhh-hhcCC---chHHHHHHHhhhcCCccc-----CCCCCCCCccccCh--hhhhccccCchHHHHHHHHhHHhhC
Q 024998 20 KRKLRGF-IAEKN---CAPLMLRIAWHSAGTYDV-----KTKTGGPFGTMRLA--AEQAHSANNGLDIAVRLLEPFKEQF 88 (259)
Q Consensus 20 ~~~~~~~-~~~~~---~a~~~lRl~FHDc~~~d~-----~~~~gG~dgsi~~~--~E~~~~~N~gl~~~~~~i~~iK~~~ 88 (259)
+.+|++. ..+.. .++.+|||+||||++|+. ..+.|||||||++. .|+++++|.||+..++.|.++++++
T Consensus 21 ~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~vvd~lk~~~e~~ 100 (328)
T cd00692 21 LDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEIVEALRPFHQKH 100 (328)
T ss_pred HHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHHHHHHHHHHHhc
Confidence 3444443 43444 577799999999999994 56789999999874 5999999999986667777776666
Q ss_pred CCCCHHHHHHhhhhhhhhh-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCCHHHHhhhhcCccccc
Q 024998 89 PTISYADLYQLAGVVGVEV-TGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLVS 167 (259)
Q Consensus 89 ~~VS~ADiialAa~~av~~-~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~GaHtiG~ 167 (259)
+ |||||||+|||++||+. .|||.|+|++||+|++++.++++||.|+.++++|++.| +++||+.+|||+|+||||||+
T Consensus 101 c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F-~~~Gf~~~E~VaLsGAHTiG~ 178 (328)
T cd00692 101 N-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARF-ADAGFSPDELVALLAAHSVAA 178 (328)
T ss_pred C-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHhhhcccccccc
Confidence 5 99999999999999994 69999999999999999999999999999999999999 999999999999999999999
Q ss_pred ccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhccC----------------CCcccccccccccCCCChHHHHH
Q 024998 168 AKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGEK----------------DGLLQLPSDKALLDDPVFRPLVE 231 (259)
Q Consensus 168 ~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~~----------------~gll~l~sD~~L~~d~~t~~~v~ 231 (259)
+|.. ++.++ ..+|+.||.+|||+| |++++.+.. .|+++|+||++|+.|++|+.+|+
T Consensus 179 a~~~---Dps~~---g~p~D~TP~~FDn~Y--f~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~ 250 (328)
T cd00692 179 QDFV---DPSIA---GTPFDSTPGVFDTQF--FIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQ 250 (328)
T ss_pred cCCC---CCCCC---CCCCCCCcchhcHHH--HHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHH
Confidence 9964 22222 147899999999999 999874311 25667899999999999999999
Q ss_pred HhhhCHhHHHHHHHHHHHHHHhCCCCC
Q 024998 232 KYAADEDAFFADYAEAHLKLSELGFAE 258 (259)
Q Consensus 232 ~yA~~~~~F~~~F~~Am~Km~~lgv~~ 258 (259)
+||+||++|+++|++||+||+++||+.
T Consensus 251 ~fa~dq~~f~~~Fa~Am~KLs~lgv~~ 277 (328)
T cd00692 251 SFVNNQAKMNAAFAAAMLKLSLLGQDN 277 (328)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCCc
Confidence 999999999999999999999999985
No 8
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=2.4e-59 Score=435.57 Aligned_cols=251 Identities=33% Similarity=0.494 Sum_probs=216.8
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhhcC---------CchHHHHHHHhhhcCCcccCCCCCCCC-ccccChhhhhccccCc
Q 024998 4 NYPTVSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNG 73 (259)
Q Consensus 4 ~cp~~e~~v~~~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~g 73 (259)
....+++.=.-.++++|++|++++.++ .++|.+|||+||+++|||.++++||++ |+|+|.+|.+++.|.|
T Consensus 32 ~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~g 111 (409)
T cd00649 32 DFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVN 111 (409)
T ss_pred CCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhh
Confidence 333444444455677799999999875 699999999999999999999999998 6999999999999999
Q ss_pred hHHHHHHHHhHHhhCC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC--------------------------
Q 024998 74 LDIAVRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP-------------------------- 126 (259)
Q Consensus 74 l~~~~~~i~~iK~~~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~-------------------------- 126 (259)
|.++..+|++||+++| .||+||+|+||+.+|||.+|||.|+|.+||.|+..+.
T Consensus 112 L~~a~~~L~pik~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~p 191 (409)
T cd00649 112 LDKARRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENP 191 (409)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccc
Confidence 9999999999999998 7999999999999999999999999999999997532
Q ss_pred ------------CCC--CCCCCCCChHHHHHHHHHhcCCCHHHHhhh-hcCcccccccccccccCCC-----------cc
Q 024998 127 ------------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLVSAKLEGATRRGL-----------DL 180 (259)
Q Consensus 127 ------------~~~--~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL-~GaHtiG~~~~~~~~~~~~-----------~l 180 (259)
+++ .||+|..++.+|++.| .+||||++||||| +||||||++||..|..+.. .|
T Consensus 192 l~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F-~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gL 270 (409)
T cd00649 192 LAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGL 270 (409)
T ss_pred hhhhhccccccCCCCCCCCCCCccCHHHHHHHH-HHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhh
Confidence 233 6999999999999999 9999999999999 5999999999986632100 01
Q ss_pred c-----------------CCCCCCCCCccccCchhhhhhHhhcc--------------------------------CCCc
Q 024998 181 R-----------------DHGPATLSFLTIPTSRMCHWELLTGE--------------------------------KDGL 211 (259)
Q Consensus 181 ~-----------------~~~~~~~tp~~fDN~Y~~y~~ll~~~--------------------------------~~gl 211 (259)
. -.++|+.||.+|||+| |++|+.++ +.++
T Consensus 271 gw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~Y--F~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~ 348 (409)
T cd00649 271 GWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNY--LKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAP 348 (409)
T ss_pred cccccCCCCCCCCCccccCCCCCCCCcchhhHHH--HHHHHhccceeccCCCCcccccccCccccccCCCccccccccCc
Confidence 0 1157889999999999 99999831 1256
Q ss_pred ccccccccccCCCChHHHHHHhhhCHhHHHHHHHHHHHHH--HhCCCC
Q 024998 212 LQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKL--SELGFA 257 (259)
Q Consensus 212 l~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km--~~lgv~ 257 (259)
.+|+||++|+.|++|+.+|++||.|++.||++|++||.|| +.+|++
T Consensus 349 gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~ 396 (409)
T cd00649 349 MMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPK 396 (409)
T ss_pred ccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCch
Confidence 7778999999999999999999999999999999999999 577764
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=3e-58 Score=411.45 Aligned_cols=229 Identities=42% Similarity=0.605 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCC-CCCCCCccccChhhhhccccCchHHHHHHHHhHHhhCC
Q 024998 11 DYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFP 89 (259)
Q Consensus 11 ~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~-~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~iK~~~~ 89 (259)
.|++.|+.. +.+++.+++++|||+||||++|+.+. ..|||||||++++|+++|+|.+|.+++++|++||++++
T Consensus 2 ~v~~~l~~~------~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDL------ITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHH------HHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcC
Confidence 356666655 56689999999999999999999887 77999999999999999999998889999999999985
Q ss_pred ---CCCHHHHHHhhhhhhhhhc--CCCCCCCCCCCCCCC-----CCCCCCCCCCCCCChHHHHHHHHHhcCCCHHHHhhh
Q 024998 90 ---TISYADLYQLAGVVGVEVT--GGPDIPFHPGRDDKA-----EPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL 159 (259)
Q Consensus 90 ---~VS~ADiialAa~~av~~~--GGP~~~v~~GR~D~~-----~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL 159 (259)
+|||||||++|+++||+.+ |||.|+|++||+|+. .+.+.+.+|.|..++.++++.| .++||+++|||||
T Consensus 76 ~~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F-~~~Gl~~~e~VAL 154 (255)
T cd00314 76 GGNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKF-KRMGLSPSELVAL 154 (255)
T ss_pred CCCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHH-HHcCCCHHHHHhh
Confidence 7999999999999999999 999999999999999 4567788899999999999999 9999999999999
Q ss_pred h-cCccc-ccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhccC------------CCcccccccccccCCCC
Q 024998 160 S-GGHTL-VSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGEK------------DGLLQLPSDKALLDDPV 225 (259)
Q Consensus 160 ~-GaHti-G~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~~------------~gll~l~sD~~L~~d~~ 225 (259)
+ ||||+ |++||..+..+.. .+|+.||.+|||+| |++|+.+.. +++..|+||+.|+.|++
T Consensus 155 ~~GaHti~G~~~~~~~~~~~~-----~~~~~tp~~fDN~y--y~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~ 227 (255)
T cd00314 155 SAGAHTLGGKNHGDLLNYEGS-----GLWTSTPFTFDNAY--FKNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSE 227 (255)
T ss_pred ccCCeeccCcccCCCCCcccC-----CCCCCCCCccchHH--HHHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHh
Confidence 9 99999 9999996654421 36789999999999 999999741 23455679999999999
Q ss_pred hHHHHHHhhhCHhHHHHHHHHHHHHHHh
Q 024998 226 FRPLVEKYAADEDAFFADYAEAHLKLSE 253 (259)
Q Consensus 226 t~~~v~~yA~~~~~F~~~F~~Am~Km~~ 253 (259)
|+.+|++||.|+++|+++|++||.||++
T Consensus 228 t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 228 TRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999974
No 10
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2e-59 Score=413.45 Aligned_cols=204 Identities=38% Similarity=0.582 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCccccC-hhhhhccccCchHHHHHHHHhHHhh---
Q 024998 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL-AAEQAHSANNGLDIAVRLLEPFKEQ--- 87 (259)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~-~~E~~~~~N~gl~~~~~~i~~iK~~--- 87 (259)
||+.|+++ +..++.++|+||||+||||++| |||||||++ .+|+++++|.||++++++|+.||++
T Consensus 1 Vr~~v~~~------~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~ 68 (230)
T PF00141_consen 1 VRSDVRAA------FKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEA 68 (230)
T ss_dssp HHHHHHHH------HHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHH------HHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcc
Confidence 67778777 7789999999999999999987 999999976 7899999999998899999999976
Q ss_pred -CC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCC--CCCCCCCChHHHHHHHHHhcCCCHHHHhhhhcCc
Q 024998 88 -FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGH 163 (259)
Q Consensus 88 -~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~--~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~GaH 163 (259)
|| +|||||||+||+++||+.+|||.|+|++||+|+.++.+.+ +||.|..++++|++.| +++|||++|||||+|||
T Consensus 69 ~cp~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 69 ACPGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFF-ARKGLSAEEMVALSGAH 147 (230)
T ss_dssp HSTTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHH-HHTT--HHHHHHHHGGG
T ss_pred cccCCCCHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhh-hccccchhhhcceeccc
Confidence 77 7999999999999999999999999999999999997643 5999999999999999 99999999999999999
Q ss_pred ccccccccccccCCCc-----c-----cCCC--------CCCCCCccccCchhhhhhHhhccCCCcccccccccccCCCC
Q 024998 164 TLVSAKLEGATRRGLD-----L-----RDHG--------PATLSFLTIPTSRMCHWELLTGEKDGLLQLPSDKALLDDPV 225 (259)
Q Consensus 164 tiG~~~~~~~~~~~~~-----l-----~~~~--------~~~~tp~~fDN~Y~~y~~ll~~~~~gll~l~sD~~L~~d~~ 225 (259)
|||++||.+|. +.|. + ...| +++ ||.+|||+| |++|+.+ +|+|. ||++|+.|++
T Consensus 148 TiG~~~c~~f~-rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Y--y~~ll~~--~gll~--SD~~L~~d~~ 219 (230)
T PF00141_consen 148 TIGRAHCSSFS-RLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSY--YKNLLNG--RGLLP--SDQALLNDPE 219 (230)
T ss_dssp GSTEESGGCTG-GTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHH--HHHHHHT--EEEEH--HHHHHHHSTT
T ss_pred ccccceecccc-ccccccccccccccceeccCCCcccccccc-CCCcchhHH--HHHHhcC--CCcCH--HHHHHhcCHH
Confidence 99999999887 4431 0 0011 234 899999999 9999998 78876 9999999999
Q ss_pred hHHHHHHhhhC
Q 024998 226 FRPLVEKYAAD 236 (259)
Q Consensus 226 t~~~v~~yA~~ 236 (259)
|+++|++||+|
T Consensus 220 t~~~V~~yA~d 230 (230)
T PF00141_consen 220 TRPIVERYAQD 230 (230)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhcC
Confidence 99999999976
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=7.5e-56 Score=435.40 Aligned_cols=247 Identities=33% Similarity=0.482 Sum_probs=212.6
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhcC---------CchHHHHHHHhhhcCCcccCCCCCCCC-ccccChhhhhccccCchHH
Q 024998 7 TVSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDI 76 (259)
Q Consensus 7 ~~e~~v~~~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~ 76 (259)
++++.=.-.++++|++|++++.++ .++|.+|||+||+++||+.++++||++ |+|+|.+|++||.|.+|++
T Consensus 45 y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ldk 124 (716)
T TIGR00198 45 YAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLDK 124 (716)
T ss_pred HHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHHH
Confidence 344444445566799999999875 699999999999999999999999996 6999999999999999999
Q ss_pred HHHHHHhHHhhCC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC-----------------------------
Q 024998 77 AVRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP----------------------------- 126 (259)
Q Consensus 77 ~~~~i~~iK~~~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~----------------------------- 126 (259)
+.++|++||++|| .|||||||+|||++||+.+|||.|+|.+||+|+..+.
T Consensus 125 a~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 125 ARRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 9999999999998 7999999999999999999999999999999995331
Q ss_pred --------CCC--CCCCCCCChHHHHHHHHHhcCCCHHHHhhhh-cCcccccccccccccC-C--------C--cccC--
Q 024998 127 --------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLVSAKLEGATRR-G--------L--DLRD-- 182 (259)
Q Consensus 127 --------~~~--~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~-GaHtiG~~~~~~~~~~-~--------~--~l~~-- 182 (259)
+++ .+|.|..++.+|++.| .++|||++|||||+ ||||||++||..+..+ + | .|+.
T Consensus 205 ~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F-~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~c 283 (716)
T TIGR00198 205 EMGLIYVNPEGPDGHPDPLCTAQDIRTTF-ARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWHN 283 (716)
T ss_pred hccccccCcccccCCCCCCCCHHHHHHHH-HHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhcccC
Confidence 122 6999999999999999 99999999999995 9999999999876521 0 0 0110
Q ss_pred ---------------CCCCCCCCccccCchhhhhhHhhcc------------------------------CCCccccccc
Q 024998 183 ---------------HGPATLSFLTIPTSRMCHWELLTGE------------------------------KDGLLQLPSD 217 (259)
Q Consensus 183 ---------------~~~~~~tp~~fDN~Y~~y~~ll~~~------------------------------~~gll~l~sD 217 (259)
.++|+.||.+|||+| |++|+.++ +..+.+|+||
T Consensus 284 ~~~~g~g~dt~~sglDG~wT~TP~~FDN~Y--F~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SD 361 (716)
T TIGR00198 284 QYGKGVGRDTMTSGLEVAWTTTPTQWDNGY--FYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDAD 361 (716)
T ss_pred CCCCCCCCCcccccCCCCCCCCCCccchHH--HHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchh
Confidence 157889999999999 99999751 0125567799
Q ss_pred ccccCCCChHHHHHHhhhCHhHHHHHHHHHHHHHHh--CCC
Q 024998 218 KALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE--LGF 256 (259)
Q Consensus 218 ~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~--lgv 256 (259)
++|..|++|+.+|++||.|++.|+++|++||.||++ +|.
T Consensus 362 laL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp 402 (716)
T TIGR00198 362 LALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGP 402 (716)
T ss_pred HHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCc
Confidence 999999999999999999999999999999999984 553
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=7.5e-54 Score=419.24 Aligned_cols=247 Identities=33% Similarity=0.501 Sum_probs=213.2
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhhcC---------CchHHHHHHHhhhcCCcccCCCCCCCC-ccccChhhhhccccCc
Q 024998 4 NYPTVSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNG 73 (259)
Q Consensus 4 ~cp~~e~~v~~~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~g 73 (259)
...++++.=.-.+++.|++|++++.++ ..+|.+|||+||+++|||.++++||++ |+|+|.+|.+|+.|.+
T Consensus 44 ~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~g 123 (726)
T PRK15061 44 DFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVN 123 (726)
T ss_pred CCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhh
Confidence 334455555555677799999999876 689999999999999999999999997 6999999999999999
Q ss_pred hHHHHHHHHhHHhhCC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCC-------------------------
Q 024998 74 LDIAVRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------- 127 (259)
Q Consensus 74 l~~~~~~i~~iK~~~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~------------------------- 127 (259)
|+++..+|++||+++| .||+||+|+||+.+|||.+|||.|+|.+||.|...+..
T Consensus 124 L~ka~~~L~pik~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~ 203 (726)
T PRK15061 124 LDKARRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLEN 203 (726)
T ss_pred HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccccccccccccccccc
Confidence 9999999999999997 79999999999999999999999999999999865421
Q ss_pred --------------C--CCCCCCCCChHHHHHHHHHhcCCCHHHHhhhh-cCcccccccccccccC-------------C
Q 024998 128 --------------E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLVSAKLEGATRR-------------G 177 (259)
Q Consensus 128 --------------~--~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~-GaHtiG~~~~~~~~~~-------------~ 177 (259)
+ ..+|+|..++.+|++.| .+||||++|||||+ ||||||++||..+..+ +
T Consensus 204 pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF-~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qg 282 (726)
T PRK15061 204 PLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQG 282 (726)
T ss_pred chhhhhccceecCCCCCCCCCCcccCHHHHHHHH-HHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHh
Confidence 1 12799999999999999 99999999999995 9999999999866311 0
Q ss_pred Cccc---------------CCCCCCCCCccccCchhhhhhHhhcc--------------------------------CCC
Q 024998 178 LDLR---------------DHGPATLSFLTIPTSRMCHWELLTGE--------------------------------KDG 210 (259)
Q Consensus 178 ~~l~---------------~~~~~~~tp~~fDN~Y~~y~~ll~~~--------------------------------~~g 210 (259)
+..+ -.++|+.||.+|||+| |++|+.++ +..
T Consensus 283 Lgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~Y--F~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~ 360 (726)
T PRK15061 283 LGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGY--FENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHA 360 (726)
T ss_pred ccccccCCCCCCCCCccccCCCCCCCCcchhhHHH--HHHHhhCcceeccCCCccccccccCccccccCCcccccccccC
Confidence 0000 1157899999999999 99999851 124
Q ss_pred cccccccccccCCCChHHHHHHhhhCHhHHHHHHHHHHHHHHh
Q 024998 211 LLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 253 (259)
Q Consensus 211 ll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~ 253 (259)
+.+|.||++|..|++++.+|++||.|++.|+++|++||.||++
T Consensus 361 ~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~h 403 (726)
T PRK15061 361 PTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTH 403 (726)
T ss_pred cccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcc
Confidence 6778899999999999999999999999999999999999954
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=7.9e-52 Score=367.33 Aligned_cols=216 Identities=25% Similarity=0.349 Sum_probs=182.4
Q ss_pred hcCCchHHHHHHHhhhcCCcccCCCCCCCCccccChhhhhccccCchH--HHHHHHHhHHhhCCCCCHHHHHHhhhhhhh
Q 024998 28 AEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLD--IAVRLLEPFKEQFPTISYADLYQLAGVVGV 105 (259)
Q Consensus 28 ~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~--~~~~~i~~iK~~~~~VS~ADiialAa~~av 105 (259)
.++.+++.||||+||||++||...+.|||||||++ |...++|.|+. ..++.++.|+. +.||||||||||+++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~~--~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFYS--PRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeecc--CccCHHHHHHHHHHHHH
Confidence 46689999999999999999999999999999999 56778888875 23444554433 48999999999999999
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCCHHHHhhhhc-Cccccccccccccc---CCCccc
Q 024998 106 EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG-GHTLVSAKLEGATR---RGLDLR 181 (259)
Q Consensus 106 ~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~G-aHtiG~~~~~~~~~---~~~~l~ 181 (259)
+.+|||.|+|++||+|++++.+.+ ||.|+.++++|++.| +++||+++|||+|+| |||||++||..|.. .++.-.
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~F-a~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~ 190 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESF-RRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPD 190 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHH-HHcCCChHHHheeecCCeeeeecccccchhhcCCccccC
Confidence 999999999999999999998876 999999999999999 999999999999995 99999999997642 122100
Q ss_pred CCCCCCCCCccccCchhhhhhHhhccCCCcccc------cccccccCCCChHHHHHHhhhCHhHHHHHHHHHHHHHHh
Q 024998 182 DHGPATLSFLTIPTSRMCHWELLTGEKDGLLQL------PSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 253 (259)
Q Consensus 182 ~~~~~~~tp~~fDN~Y~~y~~ll~~~~~gll~l------~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~ 253 (259)
..-||+.||.+|||+| |.+++.+++.++|++ .||..++.... ...++.+| +++.|.+.++..+.||++
T Consensus 191 ~~~p~dstp~~FDn~~--f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~-n~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 191 TVLQFFDTTIQFDNKV--VTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDG-NVTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred CCCCCCCCccccchHH--HHHHhcCCCCCceeecCCCCccchhhheecCc-cHHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 1238999999999999 999999988888754 68888876433 34556777 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=8.6e-49 Score=351.83 Aligned_cols=227 Identities=27% Similarity=0.379 Sum_probs=194.4
Q ss_pred HHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCcc-ccChhhhhccccCc--hHHHHHHHHhHHhhCC-
Q 024998 14 KAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNG--LDIAVRLLEPFKEQFP- 89 (259)
Q Consensus 14 ~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N~g--l~~~~~~i~~iK~~~~- 89 (259)
+.|+..|++| +...-+++.+|||+||+++||+.++++||+||+ |+|.+|++|+.|.+ |.+++.+|++||+++|
T Consensus 14 ~di~~lk~~i---~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 14 ADIAALKAKI---LASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHHH---HhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 3444445444 566678999999999999999999999999996 99999999999999 9999999999999997
Q ss_pred ------CCCHHHHHHhhhhhhhhhcCC-----CCCCCCCCCCCCCCCCC--C---CCCCCCCC------------ChHHH
Q 024998 90 ------TISYADLYQLAGVVGVEVTGG-----PDIPFHPGRDDKAEPPQ--E---GRLPDAKQ------------GNDHL 141 (259)
Q Consensus 90 ------~VS~ADiialAa~~av~~~GG-----P~~~v~~GR~D~~~s~~--~---~~lP~p~~------------~~~~l 141 (259)
.||+||+|+||+.+|||.+|| |.|+|.+||.|+..+.. + ..+|.+.. +.+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 799999999999999999999 99999999999987632 1 24454432 34679
Q ss_pred HHHHHHhcCCCHHHHhhhhcCc-ccccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhcc-------------
Q 024998 142 RQVFGAQMGLSDKDIVALSGGH-TLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGE------------- 207 (259)
Q Consensus 142 ~~~F~~~~Gls~~e~VaL~GaH-tiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~------------- 207 (259)
+..| .++|||++|||||+||| ++|.+|.. ++ .|+|+.+|.+|||.| |++|+...
T Consensus 171 rd~f-~rlglsd~EmvaL~Gg~r~lG~~~~~----s~-----~G~wT~~p~~f~N~f--F~nLLd~~~~W~~~~~~~~~~ 238 (297)
T cd08200 171 VDKA-QLLTLTAPEMTVLVGGLRVLGANYGG----SK-----HGVFTDRPGVLTNDF--FVNLLDMSTEWKPADEDDGLF 238 (297)
T ss_pred HHHH-HhCCCChHHHhheecchhhcccCCCC----CC-----CCCCcCCCCccccHH--HHHHhcccceeeecCCCCCce
Confidence 9999 99999999999999998 79988864 22 289999999999999 99999631
Q ss_pred -----CCC---cccccccccccCCCChHHHHHHhhhC--HhHHHHHHHHHHHHHHhCC
Q 024998 208 -----KDG---LLQLPSDKALLDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 255 (259)
Q Consensus 208 -----~~g---ll~l~sD~~L~~d~~t~~~v~~yA~~--~~~F~~~F~~Am~Km~~lg 255 (259)
..| .+++++|+.|.+|+++|++|+.||+| ++.||+||++||.||.++.
T Consensus 239 ~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 239 EGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred eeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 012 23478999999999999999999998 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3.5e-43 Score=345.92 Aligned_cols=229 Identities=25% Similarity=0.383 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCcc-ccChhhhhcccc--CchHHHHHHHHhHHhhC
Q 024998 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSAN--NGLDIAVRLLEPFKEQF 88 (259)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N--~gl~~~~~~i~~iK~~~ 88 (259)
|++.|..+|..| +...-.++.+||++||+++|||.++++||+||+ |+|.+|++|+.| .+|.+.+.+|++||+++
T Consensus 430 v~~di~~lk~~i---~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f 506 (716)
T TIGR00198 430 SEGDIKELKQQI---LASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEF 506 (716)
T ss_pred HHHHHHHHHHHH---HhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHc
Confidence 355665555433 556668899999999999999999999999995 999999999999 89999999999999999
Q ss_pred C--CCCHHHHHHhhhhhhhhhc---CCC--CCCCCCCCCCCCCCC--CCCCCC---C------------CCCChHHHHHH
Q 024998 89 P--TISYADLYQLAGVVGVEVT---GGP--DIPFHPGRDDKAEPP--QEGRLP---D------------AKQGNDHLRQV 144 (259)
Q Consensus 89 ~--~VS~ADiialAa~~av~~~---GGP--~~~v~~GR~D~~~s~--~~~~lP---~------------p~~~~~~l~~~ 144 (259)
| .||.||+|+||+.+|||.+ ||| .+||.+||.|+.... +++..| . .......|++.
T Consensus 507 ~~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d~ 586 (716)
T TIGR00198 507 AKGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEELLLDK 586 (716)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHHHHHH
Confidence 9 8999999999999999998 897 689999999998763 222222 1 12234568999
Q ss_pred HHHhcCCCHHHHhhhhcCc-ccccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhcc----------------
Q 024998 145 FGAQMGLSDKDIVALSGGH-TLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGE---------------- 207 (259)
Q Consensus 145 F~~~~Gls~~e~VaL~GaH-tiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~---------------- 207 (259)
| .++|||++|||||+||| ++|++|... + .|+|+.+|.+|||.| |++|+...
T Consensus 587 a-~~lglt~~EmvaL~Gg~r~lG~~~~~s-----~----~G~~T~~p~~f~Ndf--F~~LLd~~~~w~~~~~~~~~~~~~ 654 (716)
T TIGR00198 587 A-QLLTLTAPEMTVLIGGMRVLGANHGGS-----K----HGVFTDRVGVLSNDF--FVNLLDMAYEWRAADNNRYLFEGG 654 (716)
T ss_pred H-HhCCCChHHHHheecchhhccccCCCC-----C----CCCCcCCCCccccHH--HHHHhcCCceeeecCCCCceeeee
Confidence 9 99999999999999995 999999752 2 289999999999999 99999731
Q ss_pred --CCCccc---ccccccccCCCChHHHHHHhhhCH--hHHHHHHHHHHHHHHhCC
Q 024998 208 --KDGLLQ---LPSDKALLDDPVFRPLVEKYAADE--DAFFADYAEAHLKLSELG 255 (259)
Q Consensus 208 --~~gll~---l~sD~~L~~d~~t~~~v~~yA~~~--~~F~~~F~~Am~Km~~lg 255 (259)
..|.++ +++|..|.+|+++|++|+.||+|+ +.|++||++||.|+.++|
T Consensus 655 dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ld 709 (716)
T TIGR00198 655 DRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNLD 709 (716)
T ss_pred cCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhCC
Confidence 013333 378999999999999999999997 899999999999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.5e-42 Score=337.26 Aligned_cols=227 Identities=27% Similarity=0.386 Sum_probs=193.0
Q ss_pred HHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCcc-ccChhhhhccccC--chHHHHHHHHhHHhhC--
Q 024998 14 KAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANN--GLDIAVRLLEPFKEQF-- 88 (259)
Q Consensus 14 ~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N~--gl~~~~~~i~~iK~~~-- 88 (259)
..|..+|.+| +...-..+.+||++||+++|||.++++||+||+ |+|.+|++|+.|+ +|.+.+++|++||+++
T Consensus 439 ~di~~lk~~i---~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 439 ADIAALKAKI---LASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHHH---HhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444 555567999999999999999999999999995 9999999999999 9999999999999998
Q ss_pred -----CCCCHHHHHHhhhhhhhhhc---CC--CCCCCCCCCCCCCCCCC--C---CCCCCCC------------CChHHH
Q 024998 89 -----PTISYADLYQLAGVVGVEVT---GG--PDIPFHPGRDDKAEPPQ--E---GRLPDAK------------QGNDHL 141 (259)
Q Consensus 89 -----~~VS~ADiialAa~~av~~~---GG--P~~~v~~GR~D~~~s~~--~---~~lP~p~------------~~~~~l 141 (259)
|.||.||+|+||+.+|||.+ || |.|||.+||.|++.... + ..+|... .....|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 67999999999999999998 58 99999999999987632 2 2456543 133679
Q ss_pred HHHHHHhcCCCHHHHhhhhcCc-ccccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhcc--------C----
Q 024998 142 RQVFGAQMGLSDKDIVALSGGH-TLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGE--------K---- 208 (259)
Q Consensus 142 ~~~F~~~~Gls~~e~VaL~GaH-tiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~--------~---- 208 (259)
+..| .++|||++|||||+||| ++|.+|.. ++ .|+|+.+|.+|||.| |++|+... .
T Consensus 596 ~d~a-~~lglt~~EmvaL~Gg~r~Lg~~~~~----S~-----~G~~T~~p~~fsNdf--FvnLLdm~~~W~~~~~~~~~y 663 (726)
T PRK15061 596 VDKA-QLLTLTAPEMTVLVGGLRVLGANYGG----SK-----HGVFTDRPGVLTNDF--FVNLLDMGTEWKPTDEDEEVY 663 (726)
T ss_pred HHHH-HhCCCChHHHhheecchhhcccCCCC----CC-----CCCCcCCCCccccHH--HHHHhcCCceeeecCCCCCce
Confidence 9999 99999999999999997 78988854 22 289999999999999 99999631 0
Q ss_pred ------CCcc---cccccccccCCCChHHHHHHhhhC--HhHHHHHHHHHHHHHHhCC
Q 024998 209 ------DGLL---QLPSDKALLDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 255 (259)
Q Consensus 209 ------~gll---~l~sD~~L~~d~~t~~~v~~yA~~--~~~F~~~F~~Am~Km~~lg 255 (259)
.|.+ .+++|..|.+|+++|++|+.||+| ++.|++||++||.|+.+++
T Consensus 664 e~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 664 EGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred eeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 1222 257899999999999999999999 9999999999999999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-40 Score=307.69 Aligned_cols=247 Identities=34% Similarity=0.498 Sum_probs=212.7
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhcC---------CchHHHHHHHhhhcCCcccCCCCCCCC-ccccChhhhhccccCchH
Q 024998 6 PTVSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLD 75 (259)
Q Consensus 6 p~~e~~v~~~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~ 75 (259)
..+|+.=.-.+.+.|++|++++.++ ..+|.+|||+||-++||+..++.||.. |..+|.++.+||.|.+|+
T Consensus 59 dYaeefk~lD~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLD 138 (730)
T COG0376 59 DYAEEFKSLDLAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLD 138 (730)
T ss_pred HHHHHhhhccHHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchH
Confidence 3455555555667799999999876 378999999999999999999999987 589999999999999999
Q ss_pred HHHHHHHhHHhhCC-CCCHHHHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCC---------------------------
Q 024998 76 IAVRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--------------------------- 127 (259)
Q Consensus 76 ~~~~~i~~iK~~~~-~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~--------------------------- 127 (259)
+++.+|++||++|+ .||+||+|+|++.+|++.+|++++.|..||.|-..+..
T Consensus 139 KarRLLWPIKkKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Pla 218 (730)
T COG0376 139 KARRLLWPIKKKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLA 218 (730)
T ss_pred HHHHHhhhHhHhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchh
Confidence 99999999999998 89999999999999999999999999999999877642
Q ss_pred -----------C--CCCCCCCCChHHHHHHHHHhcCCCHHHHhhhh-cCccccccccccccc-------------CC---
Q 024998 128 -----------E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLVSAKLEGATR-------------RG--- 177 (259)
Q Consensus 128 -----------~--~~lP~p~~~~~~l~~~F~~~~Gls~~e~VaL~-GaHtiG~~~~~~~~~-------------~~--- 177 (259)
+ ...|+|..+..+|+..| ++|+++++|+|||+ ||||+|.+|...-.. .|
T Consensus 219 avqMGLIYVNPEGpng~PDpl~aA~dIRetF-aRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW 297 (730)
T COG0376 219 AVQMGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGW 297 (730)
T ss_pred hheeeeEEeCCCCCCCCCChhhhHHHHHHHH-HHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhcccc
Confidence 2 34788888999999999 99999999999998 799999999975210 00
Q ss_pred ---------Cccc---CCCCCCCCCccccCchhhhhhHhhcc-------------------------------CCCcccc
Q 024998 178 ---------LDLR---DHGPATLSFLTIPTSRMCHWELLTGE-------------------------------KDGLLQL 214 (259)
Q Consensus 178 ---------~~l~---~~~~~~~tp~~fDN~Y~~y~~ll~~~-------------------------------~~gll~l 214 (259)
.+-. ..++|+.+|++|||+| |.+|+..+ +..++||
T Consensus 298 ~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~f--f~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Ml 375 (730)
T COG0376 298 ANTYGSGKGPDTITSGLEGAWTTTPTQWSNEF--FENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMML 375 (730)
T ss_pred ccccCCCcCcccccccccccCCCCcchhhhHH--HHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceee
Confidence 0000 1257999999999999 99999764 1257789
Q ss_pred cccccccCCCChHHHHHHhhhCHhHHHHHHHHHHHHHHhCC
Q 024998 215 PSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELG 255 (259)
Q Consensus 215 ~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~lg 255 (259)
.+|.+|.-||.++.+.++|..|++.|.+.|++||-||..-.
T Consensus 376 ttDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 376 TTDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred ccchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999998643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.81 E-value=1.2e-19 Score=172.07 Aligned_cols=226 Identities=27% Similarity=0.385 Sum_probs=177.3
Q ss_pred HHHHHHHHHhhhhhhcCCchHHHHHHHhhhcCCcccCCCCCCCCc-cccChhhhhccccC--chHHHHHHHHhHHhhCC-
Q 024998 14 KAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANN--GLDIAVRLLEPFKEQFP- 89 (259)
Q Consensus 14 ~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dg-si~~~~E~~~~~N~--gl~~~~~~i~~iK~~~~- 89 (259)
..|...|.+| +++.-..+.++-.+|-.+.||..|++.||+|| .|++.+.++|+.|. -|.+.+.+++.|.+++.
T Consensus 449 ~di~~lK~~I---lasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fnk 525 (730)
T COG0376 449 ADIAALKAKI---LASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNK 525 (730)
T ss_pred HHHHHHHHHH---HHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 4555555443 55666788999999999999999999999998 99999999999995 56678899999999987
Q ss_pred CCCHHHHHHhhhhhhhhhc---CCC--CCCCCCCCCCCCCCCC--C---CCCC------------CCCCChHHHHHHHHH
Q 024998 90 TISYADLYQLAGVVGVEVT---GGP--DIPFHPGRDDKAEPPQ--E---GRLP------------DAKQGNDHLRQVFGA 147 (259)
Q Consensus 90 ~VS~ADiialAa~~av~~~---GGP--~~~v~~GR~D~~~s~~--~---~~lP------------~p~~~~~~l~~~F~~ 147 (259)
.||.||+|+|++..||+.+ +|- .+||.+||.|+..... + -.-| ....+..-|+..- +
T Consensus 526 kvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkA-q 604 (730)
T COG0376 526 KVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKA-Q 604 (730)
T ss_pred ccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHH-H
Confidence 6999999999999999974 454 5788899999987521 0 0011 1122334478888 8
Q ss_pred hcCCCHHHHhhhhcCc-ccccccccccccCCCcccCCCCCCCCCccccCchhhhhhHhhcc--------CCCcc------
Q 024998 148 QMGLSDKDIVALSGGH-TLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWELLTGE--------KDGLL------ 212 (259)
Q Consensus 148 ~~Gls~~e~VaL~GaH-tiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~ll~~~--------~~gll------ 212 (259)
.++||..||++|+||- -+|.-+.. ..+|.++..|.++.|.| |.||++.. .++++
T Consensus 605 lL~LtapemtVLiGGlRvLg~n~g~---------s~~GVfT~~pg~LtndF--FvnLlDM~~~W~~~~~~~~~feg~Drk 673 (730)
T COG0376 605 LLTLTAPEMTVLIGGLRVLGANYGG---------SKHGVFTDRPGVLTNDF--FVNLLDMGTEWKPTDDARGLFEGRDRK 673 (730)
T ss_pred HhccCCccceEEEcceEeeccCCCC---------CccceeccCcccccchh--hhhhhhccceeeeccccccceeccccc
Confidence 8999999999999987 44433322 23367899999999999 99999743 12222
Q ss_pred -------cccccccccCCCChHHHHHHhhhC--HhHHHHHHHHHHHHHHhC
Q 024998 213 -------QLPSDKALLDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSEL 254 (259)
Q Consensus 213 -------~l~sD~~L~~d~~t~~~v~~yA~~--~~~F~~~F~~Am~Km~~l 254 (259)
....|..+-++++.|.+.+-||++ ++.|.+||+.||.|..++
T Consensus 674 tG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~ 724 (730)
T COG0376 674 TGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNL 724 (730)
T ss_pred cCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhcc
Confidence 235899999999999999999996 789999999999998765
No 19
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=41.68 E-value=29 Score=32.27 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=49.1
Q ss_pred HHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCCC--CCCC----CCCChHHHHHHHHHh
Q 024998 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RLPD----AKQGNDHLRQVFGAQ 148 (259)
Q Consensus 77 ~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~~~--~lP~----p~~~~~~l~~~F~~~ 148 (259)
|+..+..++++ .|+|-=.+.+....|+. .+|-..+..++||.|-+.-...+ ..+. +-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~-~~ 213 (313)
T cd00957 137 GIQAAKQLEKE--GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYY-KK 213 (313)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHH-HH
Confidence 55555555554 44444444455444443 24667889999999865322111 1111 123567788888 88
Q ss_pred cCCC----------HHHHhhhhcCc
Q 024998 149 MGLS----------DKDIVALSGGH 163 (259)
Q Consensus 149 ~Gls----------~~e~VaL~GaH 163 (259)
.|+. ..++..|.|+|
T Consensus 214 ~~~~T~vmaASfRn~~~v~~laG~d 238 (313)
T cd00957 214 FGYKTKVMGASFRNIGQILALAGCD 238 (313)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCC
Confidence 8864 56777777776
No 20
>PRK12346 transaldolase A; Provisional
Probab=41.19 E-value=30 Score=32.23 Aligned_cols=86 Identities=15% Similarity=0.105 Sum_probs=51.8
Q ss_pred HHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCC--CCCC-CCC---CCChHHHHHHHHHh
Q 024998 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ--EGRL-PDA---KQGNDHLRQVFGAQ 148 (259)
Q Consensus 77 ~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~--~~~l-P~p---~~~~~~l~~~F~~~ 148 (259)
|+..+..++++ .|+|-=.+.+....|+. .+|-..+..++||.|.+.-.. ...+ |.. -..+.++.++| ++
T Consensus 138 Gi~A~~~L~~~--GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 214 (316)
T PRK12346 138 GIRAAEELEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYY-KQ 214 (316)
T ss_pred HHHHHHHHHHC--CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHH-HH
Confidence 45555555543 45554445555554444 357788999999998754321 1112 111 23566788888 88
Q ss_pred cCC----------CHHHHhhhhcCccc
Q 024998 149 MGL----------SDKDIVALSGGHTL 165 (259)
Q Consensus 149 ~Gl----------s~~e~VaL~GaHti 165 (259)
.|+ +.+|+.+|.|.|.+
T Consensus 215 ~~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 215 HRYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCCEE
Confidence 775 36788888888844
No 21
>PTZ00411 transaldolase-like protein; Provisional
Probab=38.30 E-value=40 Score=31.68 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=49.7
Q ss_pred HHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCC--CCC-CCCC---CChHHHHHHHHHh
Q 024998 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE--GRL-PDAK---QGNDHLRQVFGAQ 148 (259)
Q Consensus 77 ~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~~--~~l-P~p~---~~~~~l~~~F~~~ 148 (259)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.+.+.-.+. ... +... ..+.++.+.| ++
T Consensus 149 Gi~Aa~~L~~e--GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 225 (333)
T PTZ00411 149 GIQAAKALEKE--GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYY-KK 225 (333)
T ss_pred HHHHHHHHHHC--CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHH-HH
Confidence 45555555544 33333333444443333 3466788999999976533221 111 1112 3556788888 88
Q ss_pred cCC----------CHHHHhhhhcCccc
Q 024998 149 MGL----------SDKDIVALSGGHTL 165 (259)
Q Consensus 149 ~Gl----------s~~e~VaL~GaHti 165 (259)
.|+ +.+|+..|.|+|.+
T Consensus 226 ~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 226 HGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 776 46888889999844
No 22
>PRK13859 type IV secretion system lipoprotein VirB7; Provisional
Probab=34.17 E-value=26 Score=23.83 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=21.4
Q ss_pred HHHhhhh---hhhhhcCCCCCCCCCCCCCCCCC
Q 024998 96 LYQLAGV---VGVEVTGGPDIPFHPGRDDKAEP 125 (259)
Q Consensus 96 iialAa~---~av~~~GGP~~~v~~GR~D~~~s 125 (259)
+++||+. |-...+.||.+++-.||--...|
T Consensus 9 ~l~La~CqT~D~lAtckGpiFpLNVgrWqptps 41 (55)
T PRK13859 9 ALALAGCQTNDTLASCKGPIFPLNVGRWQPTPS 41 (55)
T ss_pred HHHHHhccccCccccccCCccccccccccCChh
Confidence 4556654 45556889999999999765544
No 23
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=33.06 E-value=60 Score=31.14 Aligned_cols=86 Identities=17% Similarity=0.205 Sum_probs=51.8
Q ss_pred HHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCCC--CCCCCC----CChHHHHHHHHHh
Q 024998 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RLPDAK----QGNDHLRQVFGAQ 148 (259)
Q Consensus 77 ~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~~~--~lP~p~----~~~~~l~~~F~~~ 148 (259)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.|-+.-...+ .+|... ..+.++.+.| ++
T Consensus 143 Gi~A~~~L~~~--GI~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~~~~~~~~dpGv~~v~~i~~~~-~~ 219 (391)
T PRK12309 143 GIKAAEVLEKE--GIHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYY-KK 219 (391)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCCCccccccchHHHHHHHHHHHH-Hh
Confidence 55555555544 34444444444444443 35778899999998875433222 133222 3467788888 77
Q ss_pred cCC----------CHHHHhhhhcCccc
Q 024998 149 MGL----------SDKDIVALSGGHTL 165 (259)
Q Consensus 149 ~Gl----------s~~e~VaL~GaHti 165 (259)
.|+ +.+++..|.|+|.+
T Consensus 220 ~~~~T~Im~ASfRn~~~v~~laG~d~~ 246 (391)
T PRK12309 220 FGYKTEVMGASFRNIGEIIELAGCDLL 246 (391)
T ss_pred cCCCcEEEecccCCHHHHHHHHCCCee
Confidence 775 36788888888844
No 24
>PF08383 Maf_N: Maf N-terminal region; InterPro: IPR013592 This region is found in various leucine zipper transcription factors of the Maf family. These are implicated in the regulation of insulin gene expression [], in erythroid differentiation [], and in differentiation of the neuroretina [].
Probab=32.38 E-value=33 Score=21.40 Aligned_cols=15 Identities=47% Similarity=0.749 Sum_probs=12.0
Q ss_pred HhcCCCHHHHh-hhhc
Q 024998 147 AQMGLSDKDIV-ALSG 161 (259)
Q Consensus 147 ~~~Gls~~e~V-aL~G 161 (259)
...|||++|.| ||+|
T Consensus 19 e~l~LtpEDAvEaLi~ 34 (35)
T PF08383_consen 19 EALGLTPEDAVEALIG 34 (35)
T ss_pred hhcCCCHHHHHHHHhc
Confidence 55699999999 6765
No 25
>PRK05269 transaldolase B; Provisional
Probab=31.49 E-value=33 Score=31.99 Aligned_cols=86 Identities=15% Similarity=0.108 Sum_probs=48.9
Q ss_pred HHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCC---CCCC---CCCCChHHHHHHHHHh
Q 024998 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE---GRLP---DAKQGNDHLRQVFGAQ 148 (259)
Q Consensus 77 ~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~~---~~lP---~p~~~~~~l~~~F~~~ 148 (259)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.|-+.-... ..-+ ++-..+.++.+.| ++
T Consensus 139 Gi~A~~~L~~~--GI~vn~TlvFs~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 215 (318)
T PRK05269 139 GIRAAEQLEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYY-KK 215 (318)
T ss_pred HHHHHHHHHHc--CCceeEeEecCHHHHHHHHHcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHH-HH
Confidence 45555555543 33333333344333333 3466788999999986532111 1111 1224567788888 88
Q ss_pred cCCC----------HHHHhhhhcCccc
Q 024998 149 MGLS----------DKDIVALSGGHTL 165 (259)
Q Consensus 149 ~Gls----------~~e~VaL~GaHti 165 (259)
.|+. ..++..|.|+|++
T Consensus 216 ~~~~t~im~ASfrn~~~v~~laG~d~v 242 (318)
T PRK05269 216 HGYKTVVMGASFRNTGQILELAGCDRL 242 (318)
T ss_pred cCCCceEEeeccCCHHHHHHHhCCCeE
Confidence 8764 5777778888854
No 26
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=29.63 E-value=27 Score=31.34 Aligned_cols=86 Identities=13% Similarity=-0.040 Sum_probs=46.8
Q ss_pred HHHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCC-CCCCCCC--CC---hHHHHHHHHH
Q 024998 76 IAVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE-GRLPDAK--QG---NDHLRQVFGA 147 (259)
Q Consensus 76 ~~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~~-~~lP~p~--~~---~~~l~~~F~~ 147 (259)
.|++.+..++++ .|++-=.+.+....|+. .+|-..+.+++||.|...-... ..-+++. .. +.++.+.| +
T Consensus 127 ~Gl~A~~~L~~~--GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~~~~~~~~~d~~~~~gi~~~~~~~~~~-~ 203 (252)
T cd00439 127 EGIPAIKDLIAA--GISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMDKMLEQIGLDLRGKAGVAQVTLAYKLY-K 203 (252)
T ss_pred HHHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhhhhccccccccccCcHHHHHHHHHHHH-H
Confidence 356666666664 34443334444444443 2466788999999997654211 1111221 23 34566677 6
Q ss_pred hcCCC----------HHHHhhhhcCcc
Q 024998 148 QMGLS----------DKDIVALSGGHT 164 (259)
Q Consensus 148 ~~Gls----------~~e~VaL~GaHt 164 (259)
..|.. .+++..|.|.|+
T Consensus 204 ~~~~~tkiL~AS~r~~~~v~~l~G~d~ 230 (252)
T cd00439 204 QKFKKQRVLWASFSDTLYVAPLIGCDT 230 (252)
T ss_pred HhCCCCeEEEEeeCCHHHHHHhhCCCe
Confidence 66654 455555556654
No 27
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=28.82 E-value=48 Score=30.93 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=49.4
Q ss_pred HHHHHHhHHhhCCCCCHHHHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCCC--CC-C---CCCCChHHHHHHHHHh
Q 024998 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RL-P---DAKQGNDHLRQVFGAQ 148 (259)
Q Consensus 77 ~~~~i~~iK~~~~~VS~ADiialAa~~av~--~~GGP~~~v~~GR~D~~~s~~~~--~l-P---~p~~~~~~l~~~F~~~ 148 (259)
|+..+..++++ .|+|-=.+.+....|+. .+|-..+..++||.+-+.-...+ .. + ++-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vN~TliFS~~Qa~aaa~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~-k~ 213 (317)
T TIGR00874 137 GIRAAEELEKE--GIHCNLTLLFSFVQAIACAEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYY-KK 213 (317)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHH-HH
Confidence 55555555544 33332233343333333 35778899999998774322111 11 1 1224567788888 88
Q ss_pred cCCC----------HHHHhhhhcCccc
Q 024998 149 MGLS----------DKDIVALSGGHTL 165 (259)
Q Consensus 149 ~Gls----------~~e~VaL~GaHti 165 (259)
.|+. .+++.+|.|+|.+
T Consensus 214 ~g~~T~Im~ASfRn~~qv~~laG~d~~ 240 (317)
T TIGR00874 214 HGYPTEVMGASFRNKEEILALAGCDRL 240 (317)
T ss_pred cCCCcEEEeeccCCHHHHHHHHCCCeE
Confidence 8864 6788888888843
No 28
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=25.88 E-value=44 Score=24.86 Aligned_cols=36 Identities=31% Similarity=0.641 Sum_probs=23.9
Q ss_pred ccCCCChHHHHHHhhhCHhHHHHHHH-----------HHHHHHHhCCCCC
Q 024998 220 LLDDPVFRPLVEKYAADEDAFFADYA-----------EAHLKLSELGFAE 258 (259)
Q Consensus 220 L~~d~~t~~~v~~yA~~~~~F~~~F~-----------~Am~Km~~lgv~~ 258 (259)
|..|| .+-++|..|++.+++.|. .-+.+|..+||.+
T Consensus 13 L~~dp---~~rerF~~DPea~~~~~gLt~eE~~aL~~~D~~~L~~lGvhp 59 (81)
T cd07922 13 LFKDP---GLIERFQDDPSAVFEEYGLTPAERAALREGTFGALTSIGVHP 59 (81)
T ss_pred HhcCH---HHHHHHHHCHHHHHHHcCCCHHHHHHHHccCHHHHHHcCCCH
Confidence 44455 355678888888887772 3467778887753
No 29
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=22.04 E-value=24 Score=36.12 Aligned_cols=54 Identities=20% Similarity=0.135 Sum_probs=35.4
Q ss_pred CCCCCCCCChHHHH-HHHHHhcCCCHHHHhhhhcCcccccccccccccCCCcccCCCCCCCCCccccCchhhhhhH
Q 024998 129 GRLPDAKQGNDHLR-QVFGAQMGLSDKDIVALSGGHTLVSAKLEGATRRGLDLRDHGPATLSFLTIPTSRMCHWEL 203 (259)
Q Consensus 129 ~~lP~p~~~~~~l~-~~F~~~~Gls~~e~VaL~GaHtiG~~~~~~~~~~~~~l~~~~~~~~tp~~fDN~Y~~y~~l 203 (259)
.++|+|.....+.. +.. .+.-++.+|||++.|+--+| ||.++-++||-.| |-++
T Consensus 693 ~alpsp~~~~~q~~~~p~-~~l~~d~e~~vVivG~aEvg------------------pwGSsRTRfemE~--~gel 747 (866)
T COG4982 693 AALPSPPRPFTQTPPQPR-ANLKVDFEDVVVIVGFAEVG------------------PWGSSRTRFEMEV--EGEL 747 (866)
T ss_pred ccCCCCCCCccCCCCCch-hhcccCHHHceEEecceecc------------------CccCccchhhhhh--cccc
Confidence 35777765553322 233 66677889999999886665 6666666777777 6544
No 30
>PF09349 OHCU_decarbox: OHCU decarboxylase; InterPro: IPR018020 The proteins in this entry are OHCU decarboxylase, an enzyme of the purine catabolism that catalyses the conversion of OHCU into S(+)-allantoin []; it is the third step of the conversion of uric acid (a purine derivative) to allantoin. Step one is catalysed by urate oxidase (IPR002042 from INTERPRO) and step two is catalysed by hydroxyisourate hydrolase (IPR000895 from INTERPRO). ; PDB: 3O7I_B 3O7H_B 3O7J_A 3O7K_A 2Q37_A 2O70_B 2O73_C 2O74_C 2O8I_A.
Probab=21.92 E-value=93 Score=25.73 Aligned_cols=36 Identities=22% Similarity=0.135 Sum_probs=26.5
Q ss_pred CCCCChHHHHHHHH-HhcCCCHHHHhhhhcCc-ccccc
Q 024998 133 DAKQGNDHLRQVFG-AQMGLSDKDIVALSGGH-TLVSA 168 (259)
Q Consensus 133 ~p~~~~~~l~~~F~-~~~Gls~~e~VaL~GaH-tiG~~ 168 (259)
.|..+.++|+..+. .-.+++.++...++.+| .||.-
T Consensus 31 rPf~s~~~L~~a~~~~~~~~~~~~~~~~l~aHP~lg~~ 68 (159)
T PF09349_consen 31 RPFASVDALIAAADEAVRSLSEEDKLEALRAHPRLGER 68 (159)
T ss_dssp GS-SSHHHHHHHHHHHHHCS-HHHHHHHHHTS--TTSH
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHhCcccccc
Confidence 47788999888883 22489999999999999 88864
No 31
>cd00490 Met_repressor_MetJ Met Repressor, MetJ. MetJ is a bacterial regulatory protein that uses S-adenosylmethionine (SAM) as a corepressor to regulate the production of Methionine. MetJ binds arrays of two to five adjacent copies of an eight base-pair 'metbox' sequence. MetJ forms sufficiently strong interactions with the sugar-phosphate backbone to accomodate sequence variation in natural operators. However, it is very sensitive to particular base changes in the operator. MetJ exists as a homodimer.
Probab=20.92 E-value=73 Score=24.19 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=23.4
Q ss_pred cccCCCChHHHHHH--hhhCHhHHHHHHHHHH
Q 024998 219 ALLDDPVFRPLVEK--YAADEDAFFADYAEAH 248 (259)
Q Consensus 219 ~L~~d~~t~~~v~~--yA~~~~~F~~~F~~Am 248 (259)
..++|.+||++|+. -|.|.++.-+.|--||
T Consensus 34 kiLTdERTRRQvnnlRHATNSELLCEAFLHAf 65 (103)
T cd00490 34 KILTDERTRRQVNNLRHATNSELLCEAFLHAF 65 (103)
T ss_pred HHHhhHHHHHHHhhhhhcccHHHHHHHHHHHh
Confidence 35689999999975 4778888777776665
No 32
>PRK05264 transcriptional repressor protein MetJ; Provisional
Probab=20.87 E-value=73 Score=24.34 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=23.6
Q ss_pred cccCCCChHHHHHH--hhhCHhHHHHHHHHHH
Q 024998 219 ALLDDPVFRPLVEK--YAADEDAFFADYAEAH 248 (259)
Q Consensus 219 ~L~~d~~t~~~v~~--yA~~~~~F~~~F~~Am 248 (259)
..++|.+||++|+. -|+|.++.-+.|--||
T Consensus 35 kiLTdERTRRQvnNLRHATNSELLCEAFLHA~ 66 (105)
T PRK05264 35 KILTDERTRRQVNNLRHATNSELLCEAFLHAF 66 (105)
T ss_pred HHHhhHHHHHHHhhhhhcccHHHHHHHHHHHH
Confidence 35789999999975 4788888888886665
Done!