BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024999
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZYM5|GATA_DEHSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain CBDB1) GN=gatA PE=3 SV=1
Length = 486
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ +++ + L++ ++I+S ELT+ L+R+++ P ++A +T E A QA+ AD+
Sbjct: 3 DLVKLTIAQSHKLLKDRKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAADKA 62
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+ QG + PL GIP LKD++ +TT S +N V A V +L GAVL+ K
Sbjct: 63 IKQGD-IRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLGK 121
Query: 212 -----LVSGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGILLFS 257
GS + +F TRNPWN ++ GSS G AAC +A +FS
Sbjct: 122 TNMDEFAMGSSTENSAYF--TTRNPWNTDKVPGGSSGGSAACVAASEAVFS 170
>sp|A5FQ07|GATA_DEHSB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain BAV1) GN=gatA PE=3 SV=1
Length = 486
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ +++ + L++ +I+S ELT+ L+R+++ P ++A +T E A QA+ AD+
Sbjct: 3 DLVKLTIAQSHKLLKDHKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAADKA 62
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+ QG + PL GIP LKD++ +TT S +N V A V +L GAVL+ K
Sbjct: 63 IKQGD-IRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLGK 121
Query: 212 -----LVSGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGILLFS 257
GS + +F TRNPWN ++ GSS G AAC +A +FS
Sbjct: 122 TNMDEFAMGSSTENSAYF--TTRNPWNTDKVPGGSSGGSAACVAASEAVFS 170
>sp|Q3Z6V3|GATA_DEHE1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
ethenogenes (strain 195) GN=gatA PE=3 SV=1
Length = 486
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ +++ + L++ ++++S ELTR L R+++ P ++A +T E A QAK ADE
Sbjct: 3 DLIKLTIAQSHKLLKERKLSSAELTRAHLDRIEKLEPEIKAFMTVCPESALAQAKAADEA 62
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+ QG ++ PL GIP LKD++ +TT S +N V A V +L GAVL+ K
Sbjct: 63 IKQG-HIRPLTGIPMALKDVLCTKGIRTTCSSRMLENFVPPYNAHVVDKLAEEGAVLLGK 121
Query: 212 -----LVSGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGILLFS 257
GS + +F T NPWN + GSS G AAC +A +FS
Sbjct: 122 TNMDEFAMGSSTENSAFF--TTHNPWNTAKVPGGSSGGSAACVAASEAVFS 170
>sp|Q31F53|GATA_THICR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiomicrospira
crunogena (strain XCL-2) GN=gatA PE=3 SV=1
Length = 484
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+SV E+ +R K+ITS LT+ +L R+ +Y+ L A VT T ELA + A++ADE++A+G
Sbjct: 4 LSVKEMSEKLRNKEITSVALTQHYLDRIDQYDGELNAYVTVTPELAMEMARQADEMIAEG 63
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
K G L GIP KDI KTT GS N + +A V + ++ G ++ K
Sbjct: 64 KG-GLLTGIPVAHKDIFCTLDVKTTCGSKMLDNFIAPYDAKVVEASRALGMPILGKTNMD 122
Query: 216 SLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGI 253
A + + G T+NPW+++ GSS G AA +AG+
Sbjct: 123 EFAMGSSSESSYYGATKNPWDLKAVPGGSSGGSAAVIAAGL 163
>sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA
PE=3 SV=1
Length = 485
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
S+ EL L+++K++ E+ F++R + P ++A VT D+LA ++AK+ D+ L + +
Sbjct: 7 SLKELSDLVKSKEVKPSEIVEAFIERKNQVEPKIKAYVTALDDLALEKAKKRDQELTKLE 66
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK----- 211
+ L G+P +KD I+ KTT S +N V +A V +RLKS G V+ K
Sbjct: 67 NIPDLFGLPIAIKDNISTKDIKTTCSSKMLENFVPVYDATVIERLKSQGYVITGKTNLDE 126
Query: 212 LVSGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGI 253
GS + +F TRNPW++E GSS G AA ++G+
Sbjct: 127 FAMGSSTENSAFF--PTRNPWDLERVPGGSSGGSAAVVASGM 166
>sp|Q60CK8|GATA_METCA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylococcus
capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
GN=gatA PE=3 SV=1
Length = 485
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL A + ++ +S ELT+ L R++R +PAL + +T T E+A QA+ ADE LA+G+
Sbjct: 5 TLAELAAGLERREFSSVELTQAHLARIERLDPALNSFITTTPEIALAQARAADERLAKGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
GPL GIP KDI +T+ GS + V +A V +R +AGAV++ KL
Sbjct: 65 -AGPLTGIPIAQKDIFCTKGVRTSCGSRMLDSFVSPYDACVVERFNAAGAVMLGKLNMDE 123
Query: 217 LAY---DDIWFGGRTRNPWN 233
A ++ + G +NPWN
Sbjct: 124 FAMGSSNETSYYGPVKNPWN 143
>sp|A5EY31|GATA_DICNV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dichelobacter
nodosus (strain VCS1703A) GN=gatA PE=3 SV=1
Length = 487
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ +V EL L+ K ++S ELT+ FL R+++YNP L A + T + A AK +DE
Sbjct: 3 DLHHKTVAELATLLHNKTLSSVELTQHFLSRIQQYNPKLNAYICTTADRALADAKASDER 62
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+G PL GIP G KD+ TT GS + + + A V RL++AG+VL K
Sbjct: 63 RQKGAAHSPLDGIPMGHKDLFCTKGIATTAGSKMLERFIPSYTATVVARLEAAGSVLTGK 122
Query: 212 LVSGSLAY---DDIWFGGRTRNPWN 233
L A ++ + G NPW+
Sbjct: 123 LSMDEFAMGSSNERSYFGAVYNPWD 147
>sp|Q83BM9|GATA_COXBU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=gatA PE=3 SV=1
Length = 483
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL +R K I+S ELT+ FL R+K NP L + ++ T+E A QAK AD LA+G+
Sbjct: 5 TIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L GIP KDI KT+ GS N + +A V ++L AGA+L+ K
Sbjct: 65 ATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDE 123
Query: 217 LAY----DDIWFGGRTRNPWNIE 235
A ++ +FG +NPW++E
Sbjct: 124 FAMGSSNENSYFGA-VKNPWDLE 145
>sp|A9N8Z4|GATA_COXBR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=gatA PE=3 SV=1
Length = 483
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL +R K I+S ELT+ FL R+K NP L + ++ T+E A QAK AD LA+G+
Sbjct: 5 TIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L GIP KDI KT+ GS N + +A V ++L AGA+L+ K
Sbjct: 65 ATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDE 123
Query: 217 LAY----DDIWFGGRTRNPWNIE 235
A ++ +FG +NPW++E
Sbjct: 124 FAMGSSNENSYFGA-VKNPWDLE 145
>sp|A9KBI0|GATA_COXBN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=gatA PE=3 SV=1
Length = 483
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL +R K I+S ELT+ FL R+K NP L + ++ T+E A QAK AD LA+G+
Sbjct: 5 TIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L GIP KDI KT+ GS N + +A V ++L AGA+L+ K
Sbjct: 65 ATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDE 123
Query: 217 LAY----DDIWFGGRTRNPWNIE 235
A ++ +FG +NPW++E
Sbjct: 124 FAMGSSNENSYFGA-VKNPWDLE 145
>sp|B6IZ25|GATA_COXB2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii
(strain CbuG_Q212) GN=gatA PE=3 SV=1
Length = 483
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL +R K I+S ELT+ FL R+K NP L + ++ T+E A QAK AD LA+G+
Sbjct: 5 TIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L GIP KDI KT+ GS N + +A V ++L AGA+L+ K
Sbjct: 65 ATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDE 123
Query: 217 LAY----DDIWFGGRTRNPWNIE 235
A ++ +FG +NPW++E
Sbjct: 124 FAMGSSNENSYFGA-VKNPWDLE 145
>sp|B6J4H5|GATA_COXB1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii
(strain CbuK_Q154) GN=gatA PE=3 SV=1
Length = 483
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL +R K I+S ELT+ FL R+K NP L + ++ T+E A QAK AD LA+G+
Sbjct: 5 TIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L GIP KDI KT+ GS N + +A V ++L AGA+L+ K
Sbjct: 65 ATS-LTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDE 123
Query: 217 LAY----DDIWFGGRTRNPWNIE 235
A ++ +FG +NPW++E
Sbjct: 124 FAMGSSNENSYFGA-VKNPWDLE 145
>sp|P63496|AMI4_MYCTU Putative amidase AmiD OS=Mycobacterium tuberculosis GN=amiD PE=3
SV=1
Length = 475
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Query: 89 NEEDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEA 148
+E+ I+ + + E+ LIRT+Q+TS E+T L+R++R +P L++ E A A+ A
Sbjct: 13 DEDAISKLELTEVADLIRTRQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAA 72
Query: 149 DELLAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVL 208
D +A+G Y G LHG+P G+KD+ T G+T F++ +A V RL++AGAV+
Sbjct: 73 DADIARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVI 132
Query: 209 VAKLVSGSLAYDDIWFGGRTR-NPWNIEEFSTGSSAGPAACTSAGILLFS 257
+ KL AY T NPW+ ++ SS+G T+AG+ S
Sbjct: 133 IGKLAMTEGAYLGYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGS 182
>sp|P63497|AMI4_MYCBO Putative amidase AmiD OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=amiD PE=3 SV=1
Length = 475
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Query: 89 NEEDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEA 148
+E+ I+ + + E+ LIRT+Q+TS E+T L+R++R +P L++ E A A+ A
Sbjct: 13 DEDAISKLELTEVADLIRTRQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAA 72
Query: 149 DELLAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVL 208
D +A+G Y G LHG+P G+KD+ T G+T F++ +A V RL++AGAV+
Sbjct: 73 DADIARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVI 132
Query: 209 VAKLVSGSLAYDDIWFGGRTR-NPWNIEEFSTGSSAGPAACTSAGILLFS 257
+ KL AY T NPW+ ++ SS+G T+AG+ S
Sbjct: 133 IGKLAMTEGAYLGYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGS 182
>sp|Q3AD36|GATA_CARHZ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=gatA PE=3
SV=1
Length = 485
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
++ ++S E+ I+ K+I++ E+ + R++ P ++A VT T EL + A+E DE
Sbjct: 2 ELYYLSAKEITEKIKAKEISAVEVAKATFDRIEAVEPKIQAYVTVTRELGLKMAREVDEK 61
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+A+G+ GPL G+P +KD ++ +TT S +N + +A V ++LK AGAV K
Sbjct: 62 IARGEDPGPLAGVPVAIKDNMSTAGIRTTCSSKILENYIPPYDATVVEKLKEAGAVFTGK 121
Query: 212 -----LVSGSLAYDDIWFGGRTRNPWNIE 235
GS + +F TRNPW++E
Sbjct: 122 TNLDEFAMGSSTENSRFF--PTRNPWDLE 148
>sp|Q6MRL7|GATA_BDEBA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=gatA PE=3 SV=1
Length = 490
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ F S+ E+ + + I+++E+T FLKR++ NP L A + + A Q+A+ D
Sbjct: 2 DLTFASLSEISEAVNNRSISAKEVTLHFLKRIENLNPKLNAFTSLNPQ-AVQEAEAVDAR 60
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+A G+ +G L G+P+G+K++ TT GS +N V +A RLK +G V++ K
Sbjct: 61 IANGEDVGLLAGVPFGIKEMFCTKGLTTTAGSKILENFVPPYDATAVARLKKSGIVVMGK 120
Query: 212 LVSGSLAY---DDIWFGGRTRNPWNIE 235
L A ++ F G +NPW++E
Sbjct: 121 LNQDEFAMGSSNETSFHGVVKNPWDLE 147
>sp|Q1GYD3|GATA_METFK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gatA
PE=3 SV=1
Length = 490
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
S+ +L ++ +K+I+S ELT+ +L R+ + NP + A +T EL+ QA+ AD+ +A G
Sbjct: 5 SLKQLADMLASKEISSVELTQEYLNRIAQLNPEINAYITVNPELSLAQAQAADQRIANGD 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
GPL GIP KDI ++TT GS +N + +A + +R +AGAV + K
Sbjct: 65 -AGPLTGIPIAQKDIFCAKGWRTTCGSRMLENFIAPYDAGIIERFNAAGAVNLGKTNMDE 123
Query: 217 LAY---DDIWFGGRTRNPWN 233
A ++ + G+ +NPW+
Sbjct: 124 FAMGSSNETSYFGKVQNPWD 143
>sp|A6VWN0|GATA_MARMS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinomonas sp.
(strain MWYL1) GN=gatA PE=3 SV=1
Length = 486
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
S+ L +R K I+S ELTR+FL R+ + +P L + +T +++ A +QA AD LL GK
Sbjct: 5 SISTLAQKLRNKDISSVELTRLFLARIAKLDPQLNSFITVSEQHALEQAAAADVLLQSGK 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L GIP KD+ TT GS N V E+ V R++ AGAV++ K
Sbjct: 65 GTS-LTGIPVAHKDLFCTEGTLTTCGSKMLHNFVPPYESTVTSRIQQAGAVMLGKTNMDE 123
Query: 217 LAY---DDIWFGGRTRNPWNIE 235
A ++ F G +NPWN++
Sbjct: 124 FAMGSSNENSFYGAVKNPWNLD 145
>sp|Q3J7V7|GATA_NITOC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosococcus
oceani (strain ATCC 19707 / NCIMB 11848) GN=gatA PE=3
SV=1
Length = 483
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
S+ EL + ++ ++ +SEELT+ +LKR++R N L + +T + E A +QAK AD +L G+
Sbjct: 5 SLAELASALKAREFSSEELTQHYLKRIERLNEDLNSFITVSTEEALKQAKAADAILQSGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
+ GIP KDI KT+ GS N A V RLK+AGAV++ K
Sbjct: 65 G-SSITGIPLAHKDIFCTTGVKTSCGSKMLDNFTAPYNATVVSRLKTAGAVMLGKTNMDE 123
Query: 217 LAY---DDIWFGGRTRNPW 232
A ++ F G +NPW
Sbjct: 124 FAMGSSNETSFYGSVKNPW 142
>sp|A0LSR0|GATA_ACIC1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidothermus
cellulolyticus (strain ATCC 43068 / 11B) GN=gatA PE=3
SV=1
Length = 505
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ + +EL A+I +++++EE+TR L R+ +PA+ A + + A A+ D
Sbjct: 3 DLIRRTAVELAAMIAAREVSAEEVTRAHLDRIAAVDPAVHAFLYVDADGALTAARAVDAR 62
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
LA G+ LGPL G+P LKD+ TT GS + + +A V ++++ AG V++ K
Sbjct: 63 LAAGERLGPLAGVPLALKDVFTTRGMPTTCGSKILEGWIPPYDATVVQKIRDAGIVILGK 122
Query: 212 -----LVSGSLAYDDIWFGGRTRNPWNIEEF 237
GS + + G TRNPW++
Sbjct: 123 TNMDEFAMGSSTENSAF--GPTRNPWDLSRI 151
>sp|C6E6Z2|GATA_GEOSM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp.
(strain M21) GN=gatA PE=3 SV=1
Length = 485
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ EL ++ K+++S E TR L R++ + + A +T T E A QA++AD +A G
Sbjct: 6 LTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAQDADRRIAAG 65
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ + PL G+P GLKDI +TT GS +N V + +LK GAV+V KL
Sbjct: 66 E-IAPLTGVPVGLKDIFVTKGIRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKLNQD 124
Query: 216 SLAY---DDIWFGGRTRNPWNI 234
A ++ + G RNPW++
Sbjct: 125 EFAMGSSNESSYFGPCRNPWDL 146
>sp|Q97EX8|GATA2_CLOAB Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=gatA2 PE=3 SV=1
Length = 478
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
+I M+V +L I K + SE++ + + +KR P + A +T ++ A ++AK+ D+
Sbjct: 2 EILDMTVEQLRNAILDKHLKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAKDVDKK 61
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+A G +G L GIP +KD I KTT S + V +A V K+LK+ A+++
Sbjct: 62 IANGDKVGRLAGIPIAIKDNICTDGIKTTCASKMLYDFVPPYDATVIKKLKAEDAIII-- 119
Query: 212 LVSGSLAYDDIWFGGR--------TRNPWNIEEFSTGSSAGPAACTSA 251
G + D+ G T+NP +I GSS G AA +A
Sbjct: 120 ---GKVNMDEFAMGSSTENSAFKITKNPRDITRVPGGSSGGSAAVVAA 164
>sp|B5ED19|GATA_GEOBB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=gatA PE=3 SV=1
Length = 485
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ EL ++ K+++S E TR L R++ + + A +T T E A QA++AD +A G
Sbjct: 6 LTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAEDADRRIAAG 65
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ + PL GIP GLKDI +TT GS +N V + +LK GAV+V KL
Sbjct: 66 E-IAPLTGIPVGLKDIFVTKGIRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKLNQD 124
Query: 216 SLAY---DDIWFGGRTRNPWNI 234
A ++ + G +NPW++
Sbjct: 125 EFAMGSSNESSYFGPCKNPWDL 146
>sp|Q2YC91|GATA_NITMU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=gatA
PE=3 SV=2
Length = 483
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
S+ +L A++ ++I+S ELT FLKR + NP A +T + + QA+ AD L+ G+
Sbjct: 5 SLKQLSAMLAARKISSVELTSEFLKRSRALNPEYNAFITLDERTSLAQAQAADILIGSGR 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
PL G+P KDI + TT GS N + +A V R + GAV + K
Sbjct: 65 GQ-PLTGVPIAQKDIFCTKGWLTTCGSKMLSNFISPYDAHVIGRFNAVGAVNIGKTNMDE 123
Query: 217 LAY---DDIWFGGRTRNPWNIEEFSTGSSAGPAAC 248
A ++ F G +NPW+ GSS G +AC
Sbjct: 124 FAMGSSNETSFYGPVKNPWDTAAVPGGSSGG-SAC 157
>sp|Q9HVT8|GATA_PSEAE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=gatA PE=3 SV=1
Length = 484
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ E+ + KQ ++EELTR L R+++ +P L + ++ TD+LA QAK ADE A G
Sbjct: 5 LTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERRANG 64
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ G L G P KD+ +T+ GS N V +A V ++L +AGAV + G
Sbjct: 65 EN-GALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTL-----G 118
Query: 216 SLAYDDIWFG--------GRTRNPWNIEE 236
L D+ G G +NPW+++
Sbjct: 119 KLNMDEFAMGSSNQSSHYGAVKNPWSLDR 147
>sp|Q2JUM6|GATA_SYNJA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain JA-3-3Ab) GN=gatA PE=3 SV=1
Length = 509
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 14/148 (9%)
Query: 96 MSVLE-LGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQ 154
MSV+ L + TK+ ++EE+ R +L+RL + P L++ +T T+ELA QQAK D +
Sbjct: 1 MSVIRALHRQLVTKERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQAKAVDARIRA 60
Query: 155 GKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVS 214
G+ +GPL GIP +KD + +TT S + + E+ V RL +AG V V
Sbjct: 61 GEEIGPLAGIPLAVKDNLCTQGIRTTCASRMLEGFIPPYESTVTARLAAAGMVTV----- 115
Query: 215 GSLAYDDIWFGG--------RTRNPWNI 234
G D+ G RT NPW++
Sbjct: 116 GKTNLDEFAMGSSTENSAFQRTANPWDL 143
>sp|Q8AVG9|GATA_XENLA Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Xenopus laevis GN=qrsl1 PE=2 SV=1
Length = 524
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
MS+ E A++R Q+ EL + L +K + L A +T T+++A +QA EAD+ AQG
Sbjct: 4 MSLREAAAVLRLGQVKPTELCQKCLSLIKETS-FLNAYITITEDIALKQAAEADKRFAQG 62
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK---- 211
K LG L GIP +KD + +TT S K V A V ++L GAVL+ K
Sbjct: 63 KPLGELDGIPIAIKDNFSTAGIETTCASRMLKGYVAPYNATVVQKLFDQGAVLMGKTNLD 122
Query: 212 -LVSGSLAYDDIWFGGRTRNPWN-----IEE---------------FSTGSSAGPAACTS 250
GS + D I+ G RNPW+ IE+ + GSS G A S
Sbjct: 123 EFGMGSGSTDSIF--GPVRNPWSYSRSYIEKRPISHHAAKDDSDWVIAGGSSGGSACAVS 180
Query: 251 AG 252
AG
Sbjct: 181 AG 182
>sp|Q820J1|GATA_NITEU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas
europaea (strain ATCC 19718 / NBRC 14298) GN=gatA PE=3
SV=1
Length = 486
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 108 KQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYG 167
K+I+S ELT FL R+K NP L A +T +E + QA AD+++A G+ PL GIP
Sbjct: 16 KKISSTELTSEFLSRIKALNPDLNAFITIDEEKSLDQANVADKMIAAGRST-PLTGIPIA 74
Query: 168 LKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAY---DDIWF 224
KDI + TT GS N V +A V +R AG V + K A ++ +
Sbjct: 75 QKDIFCARGWLTTCGSKMLSNFVSPYDATVVERFDQAGMVNLGKTNMDEFAMGSSNETSY 134
Query: 225 GGRTRNPWNIEEFSTGSSAGPAAC 248
G +NPW+ GSS G +AC
Sbjct: 135 YGPVKNPWDRLAVPGGSSGG-SAC 157
>sp|Q02GV8|GATA_PSEAB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=gatA PE=3 SV=1
Length = 484
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ E+ + KQ ++EELTR L R+++ +P L + ++ TD+LA QAK ADE A G
Sbjct: 5 LTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERRANG 64
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ G L G P KD+ +T+ GS N V +A V ++L +AGAV + G
Sbjct: 65 EN-GALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTL-----G 118
Query: 216 SLAYDDIWFG--------GRTRNPWNIEE 236
L D+ G G NPW+++
Sbjct: 119 KLNMDEFAMGSSNQSSHYGAVNNPWSLDR 147
>sp|B7V023|GATA_PSEA8 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
aeruginosa (strain LESB58) GN=gatA PE=3 SV=1
Length = 484
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ E+ + KQ ++EELTR L R+++ +P L + ++ TD+LA QAK ADE A G
Sbjct: 5 LTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERRANG 64
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ G L G P KD+ +T+ GS N V +A V ++L +AGAV + G
Sbjct: 65 EN-GALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTL-----G 118
Query: 216 SLAYDDIWFG--------GRTRNPWNIEE 236
L D+ G G NPW+++
Sbjct: 119 KLNMDEFAMGSSNQSSHYGAVNNPWSLDR 147
>sp|Q2JL51|GATA_SYNJB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=gatA PE=3 SV=1
Length = 510
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 96 MSVLE-LGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQ 154
MSV+ L + TK+ ++EE+ R +L+RL + P L++ +T T+ELA QQA+ D +
Sbjct: 1 MSVIRALHRQLVTKERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQARAVDARIRA 60
Query: 155 GKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK--- 211
G+ +GPL GIP +KD + +TT S + + E+ V RL +AG V V K
Sbjct: 61 GEAIGPLAGIPLAVKDNLCTQGIRTTCASRMLEGFIPPYESTVTARLAAAGMVTVGKTNL 120
Query: 212 --LVSGSLAYDDIWFGGRTRNPWNI 234
GS + + RT NPW++
Sbjct: 121 DEFAMGSSTENSAF--QRTANPWDL 143
>sp|B8I601|GATA_CLOCE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=gatA PE=3 SV=1
Length = 486
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 14/174 (8%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
DI +++ E L+ ++I++ ELTR +L R+ + +E+ ++ T+++A +QA++A L
Sbjct: 2 DITRLTIKEARKLLDNREISALELTRTYLDRINTLDGKVESYLSVTEDMALKQAEQAQNL 61
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+ GK L GIP +KD I + KTT S ++ V A +L + AV++
Sbjct: 62 IDYGK-ASLLTGIPLSIKDNICIEGTKTTCASKMLEDFVSPYTATAVDKLFADNAVIL-- 118
Query: 212 LVSGSLAYDDIWFGGRT--------RNPWNIEEFSTGSSAGPAACTSAGILLFS 257
G D+ GG T +NP+++ GSS G AAC SA + L S
Sbjct: 119 ---GKTNLDEFAMGGSTENSAFKITKNPFDLTRVPGGSSGGSAACVSASLALGS 169
>sp|B9LZ18|GATA_GEOSF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp.
(strain FRC-32) GN=gatA PE=3 SV=1
Length = 485
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ EL ++ K+++S E T L R++ P + A +T T + A + A EAD+ +A G
Sbjct: 6 LTIHELHDKLKKKEVSSVEATESMLARIEAVEPKVNAFITVTADQALKDAAEADKRIADG 65
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ L GIP LKDI +TT S +N + +A RLK+ GAVLV KL
Sbjct: 66 D-MDKLTGIPVALKDIFLTKGVRTTCASRILENFIPPYDATSVARLKARGAVLVGKLNQD 124
Query: 216 SLAY----DDIWFGGRTRNPWNIE 235
A + +F G+T NPWN+E
Sbjct: 125 EFAMGSSTESSYF-GKTSNPWNLE 147
>sp|B8GL95|GATA_THISH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thioalkalivibrio
sp. (strain HL-EbGR7) GN=gatA PE=3 SV=1
Length = 484
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ EL A + + +S ELT FLKR++ + L + VT T E A QAK AD+ A+G+
Sbjct: 5 TIAELSAALTKGECSSVELTEHFLKRIEALDGGLNSFVTVTAEQALAQAKAADDRRARGE 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
GPL G+P KDI +TT GS N + +A V +R K+ G ++ K
Sbjct: 65 -AGPLTGVPMAQKDIFCTDGVRTTCGSKMLDNFIAPYDATVVERFKAEGCPMLGKTNMDE 123
Query: 217 LAY---DDIWFGGRTRNPWN 233
A ++ F G +NPW+
Sbjct: 124 FAMGSSNETSFHGPVKNPWD 143
>sp|Q2SBG5|GATA_HAHCH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hahella chejuensis
(strain KCTC 2396) GN=gatA PE=3 SV=1
Length = 484
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 97 SVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGK 156
++ E+ + +R KQ +S E+T+ +L R+KR NP L +T T++LA QA++AD L G+
Sbjct: 5 TISEIISGLRDKQFSSREITQDYLARIKRLNPELNCFITVTEDLALSQAEQADARLNAGQ 64
Query: 157 YLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGS 216
L+G+P KD+ TT GS + V E+ V ++ AGAV + K
Sbjct: 65 -TSVLNGVPLAHKDVFCTEGVTTTCGSRMLEKFVPPYESTVTRKFIDAGAVTLGKTNMDE 123
Query: 217 LAY----DDIWFGGRTRNPWNIE 235
A ++ +F G RNPW+ E
Sbjct: 124 FAMGSSNENSYF-GPVRNPWDTE 145
>sp|Q2RGY4|GATA_MOOTA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella
thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1
Length = 487
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
++ +++ EL L+ K+I+SEE T + R++ + ++A +T T E A ++A+ D
Sbjct: 2 ELYYLTAHELSDLLNRKEISSEEATAAIIDRIEAVDGRVQAYLTRTAEQALEEARAVDAA 61
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
A+G+ LGPL G+P LKD + +TT S + V +A V +RLK AGAV++ K
Sbjct: 62 RARGETLGPLAGVPMALKDNLCTEGVRTTCSSRMLADWVPPYDATVVRRLKEAGAVMLGK 121
Query: 212 L-----VSGSLAYDDIWFGGRTRNPWNIE 235
L GS + +F TRNPW++E
Sbjct: 122 LNMDEFAMGSSTENSSFF--PTRNPWDLE 148
>sp|F1QAJ4|GATA_DANRE Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Danio rerio GN=qrsl1 PE=2 SV=1
Length = 536
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+S+ E+ +R ++++ EL R + +++R L A +T +E A +QA+ AD+ L G
Sbjct: 17 LSIREVSQALRDGKVSATELCRKCINQIQRTR-YLNAYITIAEETAMEQAERADKRLRTG 75
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK---- 211
K LGPL GIP+ +KD KTT S K V A V ++L GAVLV K
Sbjct: 76 KTLGPLDGIPFSVKDNFCTENIKTTCASNMLKGYVPPFSATVVQKLLDQGAVLVGKTNLD 135
Query: 212 -LVSGSLAYDDIWFGGRTRNPWN 233
G+ + D + G RNPW+
Sbjct: 136 EFAMGAGSTDGAF--GPVRNPWS 156
>sp|A6VBJ8|GATA_PSEA7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
aeruginosa (strain PA7) GN=gatA PE=3 SV=1
Length = 484
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ E+ + K+ ++EELTR L R+++ +P L + ++ TD+LA QAK ADE A G
Sbjct: 5 LTLAEIARALADKRFSAEELTRTLLGRIRQLDPQLNSFISVTDDLAIAQAKAADERRANG 64
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ G L G P KD+ +T+ GS N V +A V ++L +AG V + G
Sbjct: 65 EN-GALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLAAAGTVTL-----G 118
Query: 216 SLAYDDIWFG--------GRTRNPWNIEE 236
L D+ G G +NPW+++
Sbjct: 119 KLNMDEFAMGSSNQSSHYGAVKNPWSLDR 147
>sp|B0TDK7|GATA_HELMI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=gatA PE=3
SV=1
Length = 487
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 100 ELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLG 159
EL L+ K++++ E+ + R++ P + A VT T + A +QA D +A G+ +G
Sbjct: 10 ELHDLLVRKEVSATEIVKTQADRMQALEPKIRAFVTLTVDKALEQAARVDAKIAAGEAIG 69
Query: 160 PLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK-----LVS 214
PL GIP +KD + +TT S N V +A V +LK AGAV++ K
Sbjct: 70 PLEGIPMAIKDNMCTDGVRTTCSSKILNNFVPPYDATVVTKLKEAGAVMMGKTNLDEFAM 129
Query: 215 GSLAYDDIWFGGRTRNPWNIE 235
GS + +F T NPW+IE
Sbjct: 130 GSSTENSGFFA--TCNPWDIE 148
>sp|A5G9J9|GATA_GEOUR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter
uraniireducens (strain Rf4) GN=gatA PE=3 SV=1
Length = 485
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ EL ++ K+++S E TR L R+ P + A +T T E A + A+ AD +A G
Sbjct: 6 LTIHELHDKLKKKEVSSVEATRALLARIDAVEPRVNAFITVTPEEALKNAEAADRRIAAG 65
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ L GIP LKDI +TT S N + +A RLK+ G VLV KL
Sbjct: 66 D-MQLLTGIPIALKDIFLTKGVRTTCASRILDNFIPPYDATSVARLKAQGMVLVGKLNQD 124
Query: 216 SLAYD---DIWFGGRTRNPWNIE 235
A + + G+T NPWN+E
Sbjct: 125 EFAMGSSTESSYYGKTHNPWNLE 147
>sp|B1GZD3|GATA_UNCTG Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Uncultured termite
group 1 bacterium phylotype Rs-D17 GN=gatA PE=3 SV=1
Length = 485
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 91 EDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADE 150
++I V +L IR+ QI S E+ + KR+K +P ++A + +E + +QA ++D+
Sbjct: 2 DEILKTRVKDLCEKIRSGQIKSIEIVKACFKRIKETDPKVKAFLKLNEERSLKQAAQSDD 61
Query: 151 LLAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVA 210
+ G G L G+P G+KD I + T S +N + +A V ++LK AG + V
Sbjct: 62 KIKTGAECGSLEGVPIGIKDNIMIKGESMTSASKYLENYISPYDAAVIEKLKEAGVIFV- 120
Query: 211 KLVSGSLAYDDIWFGG--------RTRNPWNIE 235
G D+ GG +T NPWNI+
Sbjct: 121 ----GRTNMDEFAMGGSTETSVYQKTANPWNID 149
>sp|A5GTM0|GATA_SYNR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain RCC307) GN=gatA PE=3 SV=1
Length = 485
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 105 IRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGI 164
+R T++E + L+R+ P L+A V T + A QA+ D+ +A + GPL G+
Sbjct: 10 LRNGSATAKEHSEQALERIAATEPELKAFVNVTGDQARAQAEAVDQAIAAKQDPGPLAGV 69
Query: 165 PYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYDDIWF 224
G+KD + TT S +N V E+ V +RL AGAV+V G D+
Sbjct: 70 TIGIKDNLCTKGVTTTCSSRMLENFVPPYESTVTERLWKAGAVMV-----GKTNLDEFAM 124
Query: 225 G--------GRTRNPWNIEEFSTGSSAGPAACTSAG 252
G G T NPW+ GSS G AAC +AG
Sbjct: 125 GSSTETSAFGMTSNPWDPGRVPGGSSGGSAACVAAG 160
>sp|Q3KI27|GATA_PSEPF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
fluorescens (strain Pf0-1) GN=gatA PE=3 SV=1
Length = 483
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
+++ E+ + K+ +SEELT++ L R+ + +P L + ++ T+ELA +QAK AD A G
Sbjct: 4 LTLAEIARGLADKKFSSEELTKVLLARITQLDPQLNSFISLTEELALEQAKAADVRRANG 63
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK---- 211
+ G L G P KD+ +T+ GS N +A V +L +AG V + K
Sbjct: 64 ES-GALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVSKLAAAGTVTLGKTNMD 122
Query: 212 -LVSGSLAYDDIWFGGRTRNPWNIEE 236
GS A + W+G +NPWN+E
Sbjct: 123 EFAMGS-ANESSWYGA-VKNPWNLEH 146
>sp|C4ZHB9|GATA_EUBR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
rectale (strain ATCC 33656 / VPI 0990) GN=gatA PE=3 SV=1
Length = 503
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADEL 151
D+ ++ +ELG I+ K++T EE + + +K + + VT +E A ++A E
Sbjct: 2 DLMSLTAVELGKKIQAKEVTVEEAVKAAIASIKAKEEKINSFVTIDEEGALKKAAEVQAK 61
Query: 152 LAQGKYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK 211
+ G+ G L G+P +KD + TT S N + A KRL+ AG V+V
Sbjct: 62 IDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKILYNFIPTYTAEAVKRLEDAGCVIV-- 119
Query: 212 LVSGSLAYDDIWFG--------GRTRNPWNIEEFSTGSSAGPAACTSA 251
G D+ G G T+NPWN E GSS G A +A
Sbjct: 120 ---GKTNMDEFAMGSTTETSAFGATKNPWNTEHVPGGSSGGSCAAVAA 164
>sp|Q8RC40|GATA_THETN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=gatA PE=3 SV=1
Length = 488
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
++V EL L+ ++++++E+T+ +L+R+K P ++A+VT T+E A ++AK ADE++ G
Sbjct: 6 LTVHELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEMIKNG 65
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAK---- 211
+ L GIP +KD I+ +TT S +N + A V +RL + G V++ K
Sbjct: 66 E-AKDLTGIPVIIKDNISTEGIRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKSNLD 124
Query: 212 -LVSGSLAYDDIWFGGRTRNPWNI 234
GS + + T+NPW++
Sbjct: 125 EFAMGSSTENSAF--KTTKNPWDL 146
>sp|A2C1Y1|GATA_PROM1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain NATL1A) GN=gatA PE=3 SV=1
Length = 486
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 13/147 (8%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
M+ +L +++ +++S+EL + + R+ +P L + + ELA +A+ D+ +A G
Sbjct: 1 MTFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHIDKQIASG 60
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+L PL GIP +KD + KTT S N V E+ V K+L +AGA+++ G
Sbjct: 61 DHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKLLNAGAIMI-----G 115
Query: 216 SLAYDDIWFG--------GRTRNPWNI 234
D+ G G T NPWNI
Sbjct: 116 KTNMDEFAMGSSTETSAFGPTLNPWNI 142
>sp|Q46L72|GATA_PROMT Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain NATL2A) GN=gatA PE=3 SV=1
Length = 486
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 13/147 (8%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
M+ +L +++ +++S+EL + + R+ +P L + + ELA +A+ D+ +A G
Sbjct: 1 MTFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHIDKQIASG 60
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+L PL GIP +KD + KTT S N V E+ V K+L +AGA+++ G
Sbjct: 61 DHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKLLNAGAIMI-----G 115
Query: 216 SLAYDDIWFG--------GRTRNPWNI 234
D+ G G T NPWNI
Sbjct: 116 KTNMDEFAMGSSTETSAFGPTLNPWNI 142
>sp|Q0AFP4|GATA_NITEC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas
eutropha (strain C91) GN=gatA PE=3 SV=1
Length = 486
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 108 KQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYG 167
K+I+S ELT FL R+K NP L A +T +E + QA+ ADE++A G+ L GIP
Sbjct: 16 KKISSTELTGEFLARIKALNPDLNAFITMDEEKSLDQARTADEMIATGQST-LLTGIPIA 74
Query: 168 LKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAY---DDIWF 224
KDI + TT GS N + +A V K+ G V + K A ++ +
Sbjct: 75 QKDIFCANGWLTTCGSKMLSNFISPYDATVVKQFDQVGMVNLGKTNMDEFAMGSSNETSY 134
Query: 225 GGRTRNPWNIEEFSTGSSAGPAAC 248
G +NPW+ GSS G +AC
Sbjct: 135 YGPVKNPWDRLAVPGGSSGG-SAC 157
>sp|C3K6Y4|GATA_PSEFS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
fluorescens (strain SBW25) GN=gatA PE=3 SV=1
Length = 483
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQG 155
M++ E+ + K+ +SEELT+ L R+ ++P + + ++ T+ELA QAK AD A G
Sbjct: 4 MTLAEIARGLADKKFSSEELTKTLLARIAEHDPKVNSFISLTEELALSQAKAADARRANG 63
Query: 156 KYLGPLHGIPYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSG 215
+ G L G P KD+ +T+ GS N +A V +L +AGAV + K
Sbjct: 64 EQ-GALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVSKLAAAGAVTLGKTNMD 122
Query: 216 SLAY---DDIWFGGRTRNPWNIEE 236
A ++ + G +NPWN++
Sbjct: 123 EFAMGSANESSYYGAVKNPWNLDH 146
>sp|Q7U7F4|GATA_SYNPX Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain WH8102) GN=gatA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 110 ITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLK 169
++S EL L+RL++ P+L A V T E A A D+ A G+ LGPL G+P +K
Sbjct: 15 VSSRELVDEHLQRLEQSEPSLNAFVEVTAERARADADRVDQARAAGEDLGPLAGLPLAIK 74
Query: 170 DIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYDDIWFGGR-- 227
D + +TT S + V E+ V RL AGAVLV G D+ GG
Sbjct: 75 DNLCTRGVRTTCSSRMLEQFVPPYESTVTDRLWGAGAVLV-----GKTNLDEFAMGGSTE 129
Query: 228 ------TRNPWNIEE 236
T+NPWNIE
Sbjct: 130 TSAFGATKNPWNIEH 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,162,735
Number of Sequences: 539616
Number of extensions: 3825107
Number of successful extensions: 11121
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 9784
Number of HSP's gapped (non-prelim): 685
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)