Query 024999
Match_columns 259
No_of_seqs 252 out of 1338
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 18:14:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ip4_A Glutamyl-tRNA(Gln) amid 100.0 3.4E-49 1.1E-53 382.4 15.9 167 92-259 2-172 (485)
2 2dc0_A Probable amidase; struc 100.0 5E-48 1.7E-52 369.7 17.8 161 96-259 1-165 (434)
3 1m22_A Peptide amidase, PAM; e 100.0 4.6E-48 1.6E-52 375.9 15.2 166 92-259 7-183 (503)
4 3h0l_A Glutamyl-tRNA(Gln) amid 100.0 6.3E-47 2.1E-51 366.2 12.4 161 93-259 2-165 (478)
5 3a2q_A 6-aminohexanoate-cyclic 100.0 5E-46 1.7E-50 360.7 11.9 159 91-259 4-168 (493)
6 3kfu_E Glutamyl-tRNA(Gln) amid 100.0 5.7E-46 1.9E-50 359.0 8.3 156 96-259 1-159 (471)
7 3ppm_A Fatty-acid amide hydrol 100.0 1.7E-44 5.7E-49 355.9 10.9 162 90-259 65-229 (573)
8 1o9p_A Malonamidase E2; malona 100.0 5.5E-44 1.9E-48 340.0 10.8 148 96-259 2-149 (414)
9 2gi3_A Glutamyl-tRNA(Gln) amid 100.0 2.4E-44 8.2E-49 347.6 3.9 153 91-259 5-160 (476)
10 3a1k_A Amidase; AS family enzy 100.0 5.6E-41 1.9E-45 327.6 -8.0 163 96-259 13-189 (521)
11 3shg_B VBHA; ampylation, adeny 51.4 20 0.00068 24.7 4.0 28 98-125 32-59 (61)
12 2lz1_A Nuclear factor erythroi 34.7 37 0.0013 25.1 3.5 37 87-125 34-70 (90)
13 1skn_P DNA-binding domain of S 28.1 1E+02 0.0035 22.8 5.0 33 86-118 29-61 (92)
14 2kz5_A Transcription factor NF 26.3 62 0.0021 23.9 3.5 31 87-117 34-64 (91)
15 1zrj_A E1B-55KDA-associated pr 24.5 42 0.0014 22.0 2.1 36 91-126 8-43 (50)
No 1
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A
Probab=100.00 E-value=3.4e-49 Score=382.41 Aligned_cols=167 Identities=30% Similarity=0.425 Sum_probs=160.3
Q ss_pred hhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHH-HcCCCCCCCCCCcceeec
Q 024999 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELL-AQGKYLGPLHGIPYGLKD 170 (259)
Q Consensus 92 ~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~-~~g~~~gpL~GIPi~vKD 170 (259)
++.++++.+|+++|++|++|++||+++||+||+++|+.+|||+++++|+|+++|+++|+++ ++|+. ||||||||+|||
T Consensus 2 ~l~~~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~~d~~~~~~g~~-gpL~GvPi~vKD 80 (485)
T 3ip4_A 2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMD-GKLFGIPMGIKD 80 (485)
T ss_dssp CGGGCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHTTCCC-STTTTCEEEEET
T ss_pred CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHHHHHhcCCC-CCcCCCEEEEEc
Confidence 3678899999999999999999999999999999999999999999999999999999999 88988 999999999999
Q ss_pred cccCCCCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChhHHH
Q 024999 171 IIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAA 247 (259)
Q Consensus 171 ~i~v~G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgGsAa 247 (259)
||+++|++||+||..+.++++.+||++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++|||||||||
T Consensus 81 ~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~t~NP~~~~~~pGGSSgGsAa 160 (485)
T 3ip4_A 81 NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA 160 (485)
T ss_dssp TBCBTTBCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHH
T ss_pred CcccCCCccCCCChhhcCCCCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCCcCCccccCcCCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999885 345679999999999999999999999
Q ss_pred HHHhCCcccccC
Q 024999 248 CTSAGILLFSYC 259 (259)
Q Consensus 248 aVAaG~~p~AiG 259 (259)
+||+|++|+|||
T Consensus 161 aVAag~~~~alG 172 (485)
T 3ip4_A 161 AVAAGLVPLSLG 172 (485)
T ss_dssp HHHTTSCSEEEE
T ss_pred HhhcCCCceeee
Confidence 999999999997
No 2
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=5e-48 Score=369.71 Aligned_cols=161 Identities=32% Similarity=0.380 Sum_probs=154.2
Q ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeeccccCC
Q 024999 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLKDIIAVP 175 (259)
Q Consensus 96 ~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vKD~i~v~ 175 (259)
+++.+|+++|++|++|++||+++|++||++.|+ +|+|+++++|+|+++|+++|+++++|+..||||||||+|||+|+++
T Consensus 1 ~~~~~l~~~~~~g~~s~~el~~a~l~ri~~~~~-lna~~~~~~~~Al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~ 79 (434)
T 2dc0_A 1 MDLLEAKRLLETGRTTPLALLEEALERAKAFQD-RNALAYLDEEAARKEALALTEELRRGQVRGPLHGLPLTVKDLFPVK 79 (434)
T ss_dssp CCHHHHHHHHHTTSCCHHHHHHHHHHHHHHTGG-GCCEEEECHHHHHHHHHHHHHHHHTTCCCSTTTTCEEEEETTSCBT
T ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-CcEEEEcCHHHHHHHHHHHHHHHhcCCCCCCcCCeeEEEEeccccC
Confidence 478999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCC-CCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChhHHHHHHh
Q 024999 176 QYKTTWGSTTFKNQVL-NTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAACTSA 251 (259)
Q Consensus 176 G~~TT~Gs~~~~~~~~-~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgGsAaaVAa 251 (259)
|++||+||..+ +++ .+|+++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++|||||||||+||+
T Consensus 80 G~~tt~Gs~~~--~~~a~~dA~vV~rL~~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAa 157 (434)
T 2dc0_A 80 GMPTRAGTKAP--LPPLPEEARAVRRLREAGALLFAKTNMHEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVAL 157 (434)
T ss_dssp TBCCCTTCSSC--CCCCCSSCHHHHHHHHTTCEEEEEECCSGGGCCSSCCCTTTCCCBCSSCTTBBCCSSSHHHHHHHHH
T ss_pred CcccCCCCccc--CCCCCCCHHHHHHHHHCCCEEEEEeChhHHhcCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHc
Confidence 99999999999 566 89999999999999999999999999885 4557899999999999999999999999999
Q ss_pred CCcccccC
Q 024999 252 GILLFSYC 259 (259)
Q Consensus 252 G~~p~AiG 259 (259)
|++|+|||
T Consensus 158 g~~~~alG 165 (434)
T 2dc0_A 158 GIGLASLG 165 (434)
T ss_dssp TSSSCEEE
T ss_pred CCCceeee
Confidence 99999997
No 3
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A*
Probab=100.00 E-value=4.6e-48 Score=375.94 Aligned_cols=166 Identities=33% Similarity=0.460 Sum_probs=158.1
Q ss_pred hhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC---CCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCccee
Q 024999 92 DIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYN---PALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGL 168 (259)
Q Consensus 92 ~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~---~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~v 168 (259)
++..+++.+|+++|++|++|++||+++||+||+++| +.+|||+++++| |+++|+++|+++++|+..||||||||+|
T Consensus 7 ~~~~~~~~~l~~~l~~g~~s~~el~~a~l~ri~~~~~~~~~lna~~~~~~~-Al~~A~~~d~~~~~g~~~gpL~GvPi~v 85 (503)
T 1m22_A 7 PYAETDVADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPD-ALKEAAERDRERRDGRLRGPLHGIPLLL 85 (503)
T ss_dssp TTTTCCHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTTSTTCCCCEEEECTT-HHHHHHHHHHHHHTTCCCSTTTTCEEEE
T ss_pred CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCCCceEEEEECCHH-HHHHHHHHHHHHHcCCCCCCcCCceeEe
Confidence 567789999999999999999999999999999999 899999999998 9999999999999999899999999999
Q ss_pred eccccCCCCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCC-----C---CCCCCCcCCCCCCCCCCCCC
Q 024999 169 KDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAY-----D---DIWFGGRTRNPWNIEEFSTG 240 (259)
Q Consensus 169 KD~i~v~G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~-----~---~~~~~G~t~NP~n~~~~~GG 240 (259)
||||+++|++||+||..+.++++ +||++|+||+++|||++|||||+||++ + .+.+||+|+||||+.+++||
T Consensus 86 KD~~~v~G~~Tt~Gs~~~~~~~~-~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~~~~~~n~~~G~t~NP~~~~~~pGG 164 (503)
T 1m22_A 86 KDNINAAPMATSAGSLALQGFRP-DDAYLVRRLRDAGAVVLGKTNLSEWANFRGNDSISGWSARGGQTRNPYRISHSPCG 164 (503)
T ss_dssp ETTBCCTTSCCCTTCGGGTTCCC-CCCHHHHHHHHTTCEEEEEECCSHHHHCSCTTCCTTEETTTEECCCTTSTTBCCCS
T ss_pred ecccccCCCCcCCCCHhhcCCCC-CCcHHHHHHHHCCCEEEeccCHHHHhcccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 99999999999999999999999 999999999999999999999999875 2 23467999999999999999
Q ss_pred CChhHHHHHHhCCcccccC
Q 024999 241 SSAGPAACTSAGILLFSYC 259 (259)
Q Consensus 241 SSgGsAaaVAaG~~p~AiG 259 (259)
|||||||+||+|++|+|||
T Consensus 165 SSgGsAaAVAag~~~~alG 183 (503)
T 1m22_A 165 SSSGSAVAVAANLASVAIG 183 (503)
T ss_dssp SSHHHHHHHHTTSSSEEEE
T ss_pred cHHHHHHHHHcCCCceeee
Confidence 9999999999999999997
No 4
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Probab=100.00 E-value=6.3e-47 Score=366.19 Aligned_cols=161 Identities=32% Similarity=0.353 Sum_probs=153.1
Q ss_pred hccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeeccc
Q 024999 93 IAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLKDII 172 (259)
Q Consensus 93 i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vKD~i 172 (259)
+..+++.+|+++|++|++|++||+++||+||+++|+.+|||+++++|+|+++|+++|++ .||||||||+|||+|
T Consensus 2 l~~~sa~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~~d~~------~gpL~GvPi~vKD~~ 75 (478)
T 3h0l_A 2 LWKKSLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKER------ELPLFGIPIAVKDNI 75 (478)
T ss_dssp CTTSCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHTCCCT------TSTTTTCEEEEETTB
T ss_pred CCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCcCcEEEEeChHHHHHHHHhhchh------cCCcCCceEEEEcCc
Confidence 45689999999999999999999999999999999999999999999999999988864 689999999999999
Q ss_pred cCCCCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChhHHHHH
Q 024999 173 AVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAACT 249 (259)
Q Consensus 173 ~v~G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgGsAaaV 249 (259)
+++|++||+||..+.++++.+|+++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++||||||||++|
T Consensus 76 ~~~G~~tt~Gs~~~~~~~~~~da~~V~rL~~aGaii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaaV 155 (478)
T 3h0l_A 76 LVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSGGSAASV 155 (478)
T ss_dssp CCTTSBCCTTCGGGTTCBCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCCTTCTTBCCCSSSHHHHHHH
T ss_pred cCCCCCcCCcCHhhcCCCCCCCHHHHHHHHHCCCEEEEEeCchhhhcCCCCCCCCCCCcCCCccCCCCCCcchHHHHHHH
Confidence 999999999999999999999999999999999999999999999885 34567999999999999999999999999
Q ss_pred HhCCcccccC
Q 024999 250 SAGILLFSYC 259 (259)
Q Consensus 250 AaG~~p~AiG 259 (259)
|+|++|+|||
T Consensus 156 Aag~~~~a~G 165 (478)
T 3h0l_A 156 AVLSAPVSLG 165 (478)
T ss_dssp HHTSSSCEEE
T ss_pred HCCCCceeee
Confidence 9999999997
No 5
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A
Probab=100.00 E-value=5e-46 Score=360.71 Aligned_cols=159 Identities=26% Similarity=0.369 Sum_probs=150.7
Q ss_pred hhhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeec
Q 024999 91 EDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLKD 170 (259)
Q Consensus 91 ~~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vKD 170 (259)
.++.+ ++.+|+++|++|++|++||+++||+||++.|+.+|||+++++|+|+++|++ | .||||||||+|||
T Consensus 4 ~~~~~-~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~-d--------~gpL~GvPi~vKD 73 (493)
T 3a2q_A 4 VDLWQ-DATAQAELVRSGEISRTELLEATIAHVQAVNPEINAVIIPLFEKARRESEL-A--------SGPFAGVPYLLKD 73 (493)
T ss_dssp CCTTS-CHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHH-C--------CSTTTTCEEEEES
T ss_pred hhhhh-hHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCccCeEEecCHHHHHHHhhh-c--------CCCcCCcEEEEec
Confidence 34666 999999999999999999999999999999999999999999999999987 6 4899999999999
Q ss_pred cc-cCCCCCCcccccccc--CCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChh
Q 024999 171 II-AVPQYKTTWGSTTFK--NQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAG 244 (259)
Q Consensus 171 ~i-~v~G~~TT~Gs~~~~--~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgG 244 (259)
|| +++|++||+||..+. ++++.+|+++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++||||||
T Consensus 74 ~~~~v~G~~Tt~Gs~~~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgG 153 (493)
T 3a2q_A 74 LTVVSQGDINTSSIKGMKESGYRADHDAYFVQRMRAAGFVLLGKTNTPEMGNQVTTEPEAWGATRNPWNLGRSVGGSSGG 153 (493)
T ss_dssp SSSCCTTSBCCTTCHHHHHHTCBCSSCCHHHHHHHHHTCEEEEEECCSGGGCSSSCCCTTTCCCCBTTBTTBCCCSSSHH
T ss_pred CCcCcCCCcccccChhhhhcCCCCCCCHHHHHHHHHCCCceEEEcChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcCcHH
Confidence 99 999999999999999 999999999999999999999999999999884 455789999999999999999999
Q ss_pred HHHHHHhCCcccccC
Q 024999 245 PAACTSAGILLFSYC 259 (259)
Q Consensus 245 sAaaVAaG~~p~AiG 259 (259)
|||+||+|++|+|||
T Consensus 154 sAAAVAaG~~~~alG 168 (493)
T 3a2q_A 154 SGAAVAAALSPVAHG 168 (493)
T ss_dssp HHHHHHTTSCSEEEE
T ss_pred HHHHHHcCCCceeee
Confidence 999999999999997
No 6
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=100.00 E-value=5.7e-46 Score=358.97 Aligned_cols=156 Identities=29% Similarity=0.371 Sum_probs=147.5
Q ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeeccccCC
Q 024999 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLKDIIAVP 175 (259)
Q Consensus 96 ~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vKD~i~v~ 175 (259)
|++.+|+++|++|++|++||+++||+||+++|+.+|||++++ |+|+++|+++|+++ |||||||+|||+|+++
T Consensus 1 ~~a~~l~~~~~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~-~~al~~A~~~d~~~-------pL~GvPi~vKD~~~~~ 72 (471)
T 3kfu_E 1 MLAHEIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLSLN-ERLLEEAEAVDPGL-------PLAGLVVAVKDNIATR 72 (471)
T ss_dssp -CHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEEC-CTTTHHHHTSCCSC-------TTTTCEEEEETTBCCT
T ss_pred CcHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCccEEEEeC-HHHHHHHHhcCccC-------CcCCCeEEEECCcccC
Confidence 578999999999999999999999999999999999999999 99999998887532 9999999999999999
Q ss_pred CCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChhHHHHHHhC
Q 024999 176 QYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAACTSAG 252 (259)
Q Consensus 176 G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgGsAaaVAaG 252 (259)
|++||+||..+.++++.+|+++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++||||||||++||+|
T Consensus 73 G~~tt~Gs~~~~~~~~~~da~~V~rL~~aGaii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag 152 (471)
T 3kfu_E 73 GLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAAD 152 (471)
T ss_dssp TSCCCTTCSTTTTCCCSSCCHHHHHHHTTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHHHHHTT
T ss_pred CccccccCHhHcCCCCCCChHHHHHHHHCCCEEEeecCcCchhcCCCCCCCCCCCcCCCCccCcCCCCCcHHHHHHHHCC
Confidence 999999999999999999999999999999999999999999885 35567999999999999999999999999999
Q ss_pred CcccccC
Q 024999 253 ILLFSYC 259 (259)
Q Consensus 253 ~~p~AiG 259 (259)
++|+|||
T Consensus 153 ~~~~a~G 159 (471)
T 3kfu_E 153 LAPLALG 159 (471)
T ss_dssp SCSEEEE
T ss_pred CCccccc
Confidence 9999997
No 7
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A*
Probab=100.00 E-value=1.7e-44 Score=355.92 Aligned_cols=162 Identities=22% Similarity=0.278 Sum_probs=149.2
Q ss_pred hhhhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceee
Q 024999 90 EEDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLK 169 (259)
Q Consensus 90 ~~~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vK 169 (259)
.++|..+++.+|+++|++|++|++||+++|++||++.++.+||++++.+| ++++|+++++ .||||||||+||
T Consensus 65 ~~~i~~~~~~~l~~~l~~g~~s~~ev~~a~l~ri~~~~~~~na~~~~~~~-a~~~a~~~~~-------~gpL~GvPi~vK 136 (573)
T 3ppm_A 65 SEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD-CETQLSQAPR-------QGLLYGVPVSLK 136 (573)
T ss_dssp HHHHHHSCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTT-HHHHHHHCCT-------TCTTTTCEEEEE
T ss_pred hhhhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCccCEEEEECHH-HHHHHHhhhh-------cCCcCCCeEEEE
Confidence 46789999999999999999999999999999999999999999999876 5555554432 389999999999
Q ss_pred ccccCCCCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChhHH
Q 024999 170 DIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPA 246 (259)
Q Consensus 170 D~i~v~G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgGsA 246 (259)
|||+++|++||+||..+.++++.+||++|++|+++|||++|||||+||+++ .+..||+|+||||+.+++||||||||
T Consensus 137 D~~~~~G~~tt~Gs~~~~~~~~~~da~vV~~L~~aGAv~~gKTn~pe~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsa 216 (573)
T 3ppm_A 137 ECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEG 216 (573)
T ss_dssp TTBCCBTCCCCTTCGGGTTCCBSSCCHHHHHHHHTTCEEEEEECCCTTSCSSSCEETTTEECCCTTCTTBCCCSSSHHHH
T ss_pred cccCCCCCCcCCcChhhcCCCCCcchHHHHHHHHCCCEEEEecCCccccccCCCCCCCCCCcCCCCCCCCCCCCCCchHH
Confidence 999999999999999999999999999999999999999999999999875 24467999999999999999999999
Q ss_pred HHHHhCCcccccC
Q 024999 247 ACTSAGILLFSYC 259 (259)
Q Consensus 247 aaVAaG~~p~AiG 259 (259)
|+||+|++++|||
T Consensus 217 aaVAag~~~~alG 229 (573)
T 3ppm_A 217 ALIGSGGSPLGLG 229 (573)
T ss_dssp HHHHTTSCSEEEE
T ss_pred HHHHcCCCcEEEe
Confidence 9999999999997
No 8
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A
Probab=100.00 E-value=5.5e-44 Score=340.03 Aligned_cols=148 Identities=27% Similarity=0.359 Sum_probs=140.5
Q ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeeccccCC
Q 024999 96 MSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLKDIIAVP 175 (259)
Q Consensus 96 ~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vKD~i~v~ 175 (259)
+++.+|+++|++|++|++||+++|++||++.|+.+|||+++++|+| + +..||||||||+|||+|+++
T Consensus 2 ~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~a-~------------~~~gpL~GvPi~vKD~~~v~ 68 (414)
T 1o9p_A 2 ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSAR-A------------QASGPLRGIAVGIKDIIDTA 68 (414)
T ss_dssp CCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTCC-C------------CSSSTTTTCEEEEETTBCCS
T ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCccccEEEEeCHHHh-c------------ccCCCcCCCEEEEEcccccC
Confidence 5899999999999999999999999999999999999999998866 2 34689999999999999999
Q ss_pred CCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCCCCCCCCcCCCCCCCCCCCCCCChhHHHHHHhCCcc
Q 024999 176 QYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAACTSAGILL 255 (259)
Q Consensus 176 G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~~~~~~G~t~NP~n~~~~~GGSSgGsAaaVAaG~~p 255 (259)
|++||+||..|.++++.+|+++|+||+++|||++|||||+||++.+. |+|+||||+.+++|||||||||+||+|+++
T Consensus 69 G~~tt~Gs~~~~~~~~~~dA~~V~rL~~aGAii~GKTn~~Efa~~n~---G~t~NP~~~~~~pGGSSgGsAaaVAag~~~ 145 (414)
T 1o9p_A 69 NMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDP---TATLNPHNTGHSPGGASSGSAAAVGAGMIP 145 (414)
T ss_dssp SSCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSCC---CSCCBTTBTTBCCCSSSHHHHHHHHTTSCS
T ss_pred CcccCcCCHhhccCCCCCCHHHHHHHHHCCCEEEEecCCchhhcCCC---CCCCCCCCCCCCCCcchHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999998443 999999999999999999999999999999
Q ss_pred cccC
Q 024999 256 FSYC 259 (259)
Q Consensus 256 ~AiG 259 (259)
+|||
T Consensus 146 ~alG 149 (414)
T 1o9p_A 146 LALG 149 (414)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 9997
No 9
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A*
Probab=100.00 E-value=2.4e-44 Score=347.57 Aligned_cols=153 Identities=30% Similarity=0.435 Sum_probs=142.8
Q ss_pred hhhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeec
Q 024999 91 EDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRYNPALEAVVTYTDELAYQQAKEADELLAQGKYLGPLHGIPYGLKD 170 (259)
Q Consensus 91 ~~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~~~~ln~~~~~~~e~Al~~A~~~d~~~~~g~~~gpL~GIPi~vKD 170 (259)
.++..+++.+| |++|++|++||+++||+||++.|+.+|+|+++++|+|+ |+ + ||||||||+|||
T Consensus 5 ~~~~~~s~~~l---i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~al------d~-----~--gpL~GvPi~vKD 68 (476)
T 2gi3_A 5 LDFRKLTIEEC---LKLSEEEREKLPQLSLETIKRLDPHVKAFISVRENVSV------EK-----K--GKFWGIPVAIKD 68 (476)
T ss_dssp SCGGGCCHHHH---TTSCHHHHTTHHHHHHHHHHHHHHHHCCEEEECCCCCC------CC-----C--STTTTCEEEEET
T ss_pred cccccCCHHHH---HHcCCCCHHHHHHHHHHHHHHhCCceeEEEecChhhhh------hc-----c--CCcCCceEEEEc
Confidence 45777899999 99999999999999999999999999999999998776 21 2 899999999999
Q ss_pred cccCCCCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCCChhHHH
Q 024999 171 IIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAA 247 (259)
Q Consensus 171 ~i~v~G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGSSgGsAa 247 (259)
||+++|++||+||..+.++++.+||++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++|||||||||
T Consensus 69 ~~~v~G~~Tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAa 148 (476)
T 2gi3_A 69 NILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWDLERVPGGSSGGSAA 148 (476)
T ss_dssp TBCCSSSCCCTTCGGGTTCCCCSCCHHHHHHHHHTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHH
T ss_pred CccCCCCccCccChhhcCCCCCCChHHHHHHHHCCCEEEEecCchhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999885 455789999999999999999999999
Q ss_pred HHHhCCcccccC
Q 024999 248 CTSAGILLFSYC 259 (259)
Q Consensus 248 aVAaG~~p~AiG 259 (259)
+||+|++|+|||
T Consensus 149 AVAag~~~~alG 160 (476)
T 2gi3_A 149 AVSAGMVVAALG 160 (476)
T ss_dssp HHHTTSSSEEEE
T ss_pred HHHcCCCceEee
Confidence 999999999997
No 10
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A
Probab=100.00 E-value=5.6e-41 Score=327.65 Aligned_cols=163 Identities=23% Similarity=0.221 Sum_probs=141.1
Q ss_pred CCHHHHHHHHHcCCCCH-HHHHHHHHHHHHHhCCCCcEEE-EcCHHHHHHHHHHHHHH---------HHcCCCCCCCCCC
Q 024999 96 MSVLELGALIRTKQITS-EELTRIFLKRLKRYNPALEAVV-TYTDELAYQQAKEADEL---------LAQGKYLGPLHGI 164 (259)
Q Consensus 96 ~si~~L~~~l~~g~lT~-~ev~~a~l~ri~~~~~~ln~~~-~~~~e~Al~~A~~~d~~---------~~~g~~~gpL~GI 164 (259)
.++.++...|.+++++. +++++.+++++++.++..|.++ .+..+++ .++.+.|+. ..+|+..||||||
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~g~~~gpL~Gv 91 (521)
T 3a1k_A 13 AAARHYGITLDKTARLEWPALIDGALGSYDVVDQLYADEATPPTTSRE-HAVPSASENPLSAWYVTTSIPPTSDGVLTGR 91 (521)
T ss_dssp HHHHHTTCCCCTTHHHHHHHHHHHHTHHHHHHHHHHHHHSCCCCCCCC-EECCCTTTCTTSCEEEEEEECCSSCCTTTTC
T ss_pred HHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHhhhcccccccCchhh-hhccccccchhhhhHHHHhhcCCCCCCCCCC
Confidence 46778888899999999 9999999999988776665444 5555555 455555441 1247778999999
Q ss_pred cceeeccccCCCCCCccccccccCCCCCCcHHHHHHHHHCCCeEEEecCCCCCCCC---CCCCCCcCCCCCCCCCCCCCC
Q 024999 165 PYGLKDIIAVPQYKTTWGSTTFKNQVLNTEAWVYKRLKSAGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGS 241 (259)
Q Consensus 165 Pi~vKD~i~v~G~~TT~Gs~~~~~~~~~~da~vV~rL~~aGAIiigKt~~~ela~~---~~~~~G~t~NP~n~~~~~GGS 241 (259)
||+|||||+++|++||+||..+.++++.+||++|+||+++|||++|||||+||+++ .+..||+|+||||+.+++|||
T Consensus 92 Pi~vKD~i~v~G~~Tt~Gs~~~~~~~~~~DA~vV~rLr~AGAvilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGS 171 (521)
T 3a1k_A 92 RVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFSGSSFTPASGPVRNPWDRQREAGGS 171 (521)
T ss_dssp EEEEETTBCCTTSCBCTTCTTTTTBCCSSCCHHHHHHHHTTCEEEEEECCCGGGCCSSSSCCTTCCCEETTEEEEECCSS
T ss_pred EEEEEcCcccCCcccCCCChhhcCCCCCCchHHHHHHHHCCCEEEEeeChhhHhhCCCCCCCCCCCcCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999985 345679999999999999999
Q ss_pred ChhHHHHHHhCCcccccC
Q 024999 242 SAGPAACTSAGILLFSYC 259 (259)
Q Consensus 242 SgGsAaaVAaG~~p~AiG 259 (259)
||||||+||+|+|++|||
T Consensus 172 SgGSAAAVAag~~~~alG 189 (521)
T 3a1k_A 172 SGGSAALVANGDVDFAIG 189 (521)
T ss_dssp SHHHHHHHHTTSSSEEEE
T ss_pred CchHHHHHhcCCcceecc
Confidence 999999999999999997
No 11
>3shg_B VBHA; ampylation, adenylylation, toxin-antitoxin complex, FIC fold transfer, transferase-protein binding complex; HET: TLA; 1.50A {Bartonella schoenbuchensis R1}
Probab=51.36 E-value=20 Score=24.71 Aligned_cols=28 Identities=14% Similarity=0.337 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 024999 98 VLELGALIRTKQITSEELTRIFLKRLKR 125 (259)
Q Consensus 98 i~~L~~~l~~g~lT~~ev~~a~l~ri~~ 125 (259)
+.++.+.+-.|++|..++++.+..|+.+
T Consensus 32 ~l~~~erwv~GEis~~e~i~~~~~r~~~ 59 (61)
T 3shg_B 32 VVAQMERVVVGELETSDVIKDLMERIKR 59 (61)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHc
Confidence 4678888999999999999999999874
No 12
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=34.70 E-value=37 Score=25.14 Aligned_cols=37 Identities=19% Similarity=0.479 Sum_probs=29.4
Q ss_pred CCChhhhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 024999 87 PENEEDIAFMSVLELGALIRTKQITSEELTRIFLKRLKR 125 (259)
Q Consensus 87 p~~~~~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~ 125 (259)
|-..++|..+++.|+.++++...+|.+|+. ++.-+.+
T Consensus 34 PFsvdqIvnLpv~eFn~lL~~~~Lt~~Ql~--lIrdiRR 70 (90)
T 2lz1_A 34 PFPVEKIINLPVVDFNEMMSKEQFNEAQLA--LIRDIRR 70 (90)
T ss_dssp SSCHHHHHHSCHHHHHHHHHHSCCCHHHHH--HHHHHHH
T ss_pred CCCHHHHHHCCHHHHHHHHHHcCCCHHHHH--HHHHHHH
Confidence 444688999999999999999999999974 3444444
No 13
>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1
Probab=28.07 E-value=1e+02 Score=22.81 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=28.2
Q ss_pred CCCChhhhccCCHHHHHHHHHcCCCCHHHHHHH
Q 024999 86 KPENEEDIAFMSVLELGALIRTKQITSEELTRI 118 (259)
Q Consensus 86 ~p~~~~~i~~~si~~L~~~l~~g~lT~~ev~~a 118 (259)
.|-..++|..+++.++.++++...+|..++...
T Consensus 29 lPfs~~eIv~lpv~efn~lLk~~~Ls~~Ql~~i 61 (92)
T 1skn_P 29 LPVSAFQISEMSLSELQQVLKNESLSEYQRQLI 61 (92)
T ss_dssp CSSCHHHHHHSCHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCCCHHHHHHCcHHHHHHHHHhCCCCHHHHHHH
Confidence 355578899999999999999999999987654
No 14
>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=26.31 E-value=62 Score=23.94 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=26.7
Q ss_pred CCChhhhccCCHHHHHHHHHcCCCCHHHHHH
Q 024999 87 PENEEDIAFMSVLELGALIRTKQITSEELTR 117 (259)
Q Consensus 87 p~~~~~i~~~si~~L~~~l~~g~lT~~ev~~ 117 (259)
|-+.++|..+++.++.++++...+|..|+..
T Consensus 34 Pfs~~~Iv~lpv~efn~ll~~~~Ls~~Ql~l 64 (91)
T 2kz5_A 34 PFPTDKIVNLPVDDFNELLARYPLTESQLAL 64 (91)
T ss_dssp SSCHHHHHHSCHHHHHHHHHHSCCCHHHHHH
T ss_pred CCCHHHHHHCcHHHHHHHHHHcCCCHHHHHH
Confidence 4446889999999999999999999998753
No 15
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=24.47 E-value=42 Score=22.01 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=27.3
Q ss_pred hhhccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Q 024999 91 EDIAFMSVLELGALIRTKQITSEELTRIFLKRLKRY 126 (259)
Q Consensus 91 ~~i~~~si~~L~~~l~~g~lT~~ev~~a~l~ri~~~ 126 (259)
.++..+++.+|.+.++.+-++..-.-..+++|+.++
T Consensus 8 ~~~~klkV~eLK~eLk~RgL~~~G~Ka~Li~RL~~~ 43 (50)
T 1zrj_A 8 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAA 43 (50)
T ss_dssp CCGGGSCHHHHHHHHHHTTCCCCSCHHHHHHHHHHH
T ss_pred CCHHHCcHHHHHHHHHHcCCCCCCcHHHHHHHHHHH
Confidence 467889999999999999888654445666666654
Done!