Query 025000
Match_columns 259
No_of_seqs 236 out of 1221
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 18:15:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025000.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025000hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2q_A Ureidoglycine aminohydr 100.0 1.4E-84 4.9E-89 580.0 30.4 258 1-259 8-266 (266)
2 1sfn_A Conserved hypothetical 100.0 2.2E-61 7.4E-66 426.8 29.5 241 16-259 1-245 (246)
3 1sq4_A GLXB, glyoxylate-induce 100.0 8.4E-60 2.9E-64 423.9 27.1 241 17-259 18-271 (278)
4 1rc6_A Hypothetical protein YL 100.0 1.3E-53 4.3E-58 379.4 24.6 248 11-259 7-260 (261)
5 1sef_A Conserved hypothetical 100.0 1.8E-50 6E-55 361.9 26.7 248 11-259 10-263 (274)
6 3rns_A Cupin 2 conserved barre 100.0 6.8E-29 2.3E-33 216.1 23.3 181 61-250 35-222 (227)
7 3h7j_A Bacilysin biosynthesis 100.0 9.3E-28 3.2E-32 210.8 21.9 191 47-252 22-218 (243)
8 1y3t_A Hypothetical protein YX 99.9 1.6E-26 5.4E-31 210.0 20.7 201 47-251 29-289 (337)
9 2vqa_A SLL1358 protein, MNCA; 99.9 2E-24 6.8E-29 198.8 24.2 204 48-254 35-314 (361)
10 1j58_A YVRK protein; cupin, de 99.9 1.7E-24 5.9E-29 201.1 21.7 202 49-253 63-336 (385)
11 3bu7_A Gentisate 1,2-dioxygena 99.9 4.6E-24 1.6E-28 199.4 22.9 202 50-253 104-368 (394)
12 2d40_A Z3393, putative gentisa 99.9 7.1E-23 2.4E-27 189.4 20.6 189 61-253 98-339 (354)
13 1juh_A Quercetin 2,3-dioxygena 99.9 2.1E-22 7.1E-27 185.9 21.4 199 49-251 33-323 (350)
14 3nw4_A Gentisate 1,2-dioxygena 99.8 2.6E-19 9E-24 165.7 23.2 200 50-253 84-350 (368)
15 1fxz_A Glycinin G1; proglycini 99.8 1.1E-17 3.9E-22 159.8 19.6 73 178-252 337-416 (476)
16 1uij_A Beta subunit of beta co 99.7 9.5E-17 3.2E-21 151.3 21.3 189 62-255 48-342 (416)
17 3kgz_A Cupin 2 conserved barre 99.7 1.9E-17 6.4E-22 136.4 13.8 106 150-257 10-121 (156)
18 2ea7_A 7S globulin-1; beta bar 99.7 5.7E-17 2E-21 153.5 19.0 204 47-255 38-358 (434)
19 2phl_A Phaseolin; plant SEED s 99.7 1.1E-16 3.7E-21 149.9 19.7 188 62-256 51-326 (397)
20 2e9q_A 11S globulin subunit be 99.7 5E-16 1.7E-20 147.8 21.7 190 61-253 61-401 (459)
21 3c3v_A Arachin ARAH3 isoform; 99.7 2.9E-16 9.8E-21 150.8 20.1 73 178-252 371-450 (510)
22 2d5f_A Glycinin A3B4 subunit; 99.7 3.6E-16 1.2E-20 150.0 19.2 73 179-253 367-446 (493)
23 3jzv_A Uncharacterized protein 99.7 1.6E-16 5.4E-21 132.1 13.7 109 147-257 16-130 (166)
24 2cav_A Protein (canavalin); vi 99.7 6.5E-16 2.2E-20 146.6 18.7 187 62-253 85-369 (445)
25 3ht1_A REMF protein; cupin fol 99.7 2.1E-16 7.3E-21 126.1 12.7 109 146-255 2-116 (145)
26 3ibm_A Cupin 2, conserved barr 99.7 8.7E-16 3E-20 127.5 15.0 106 151-257 20-134 (167)
27 1lr5_A Auxin binding protein 1 99.7 1.7E-15 5.7E-20 124.4 13.6 109 144-253 4-124 (163)
28 3myx_A Uncharacterized protein 99.6 5.9E-14 2E-18 122.8 23.9 172 61-241 45-228 (238)
29 3o14_A Anti-ecfsigma factor, C 99.6 2.8E-14 9.5E-19 123.9 19.7 200 31-252 12-211 (223)
30 2vpv_A Protein MIF2, MIF2P; nu 99.6 3E-15 1E-19 124.4 11.0 74 61-135 86-163 (166)
31 1sfn_A Conserved hypothetical 99.6 2.1E-14 7.2E-19 126.0 15.1 94 42-136 144-240 (246)
32 3es1_A Cupin 2, conserved barr 99.6 6.5E-15 2.2E-19 123.1 10.8 78 61-140 77-157 (172)
33 1o4t_A Putative oxalate decarb 99.6 2E-14 6.9E-19 114.4 11.7 88 163-251 39-129 (133)
34 3kgz_A Cupin 2 conserved barre 99.6 3E-14 1E-18 117.2 11.9 89 46-136 28-118 (156)
35 3ibm_A Cupin 2, conserved barr 99.5 1.1E-13 3.6E-18 114.9 14.9 90 46-136 36-131 (167)
36 2fqp_A Hypothetical protein BP 99.5 1.7E-14 5.7E-19 108.6 8.9 74 177-251 16-92 (97)
37 1vj2_A Novel manganese-contain 99.5 3.8E-14 1.3E-18 111.6 11.3 89 163-252 32-120 (126)
38 2fqp_A Hypothetical protein BP 99.5 1.7E-14 5.9E-19 108.5 8.9 75 60-135 15-94 (97)
39 3kgl_A Cruciferin; 11S SEED gl 99.5 5E-13 1.7E-17 127.0 20.9 75 178-254 322-403 (466)
40 1vj2_A Novel manganese-contain 99.5 3.1E-14 1.1E-18 112.1 10.6 93 42-135 27-121 (126)
41 3lwc_A Uncharacterized protein 99.5 1.9E-14 6.4E-19 113.2 9.3 83 52-136 29-112 (119)
42 3h8u_A Uncharacterized conserv 99.5 3.4E-14 1.1E-18 111.0 10.3 73 179-252 39-113 (125)
43 2bnm_A Epoxidase; oxidoreducta 99.5 6.2E-14 2.1E-18 118.0 12.6 86 48-134 102-197 (198)
44 3qac_A 11S globulin SEED stora 99.5 2.6E-13 8.8E-18 129.0 17.3 74 178-253 322-402 (465)
45 3ht1_A REMF protein; cupin fol 99.5 3.2E-14 1.1E-18 113.3 9.3 92 44-136 19-115 (145)
46 1y9q_A Transcriptional regulat 99.5 8.7E-14 3E-18 116.8 12.1 87 48-136 89-179 (192)
47 2bnm_A Epoxidase; oxidoreducta 99.5 1.6E-13 5.4E-18 115.5 13.7 89 163-251 101-196 (198)
48 3i7d_A Sugar phosphate isomera 99.5 1.3E-13 4.3E-18 113.8 12.8 90 166-255 30-122 (163)
49 3l2h_A Putative sugar phosphat 99.5 7.4E-14 2.5E-18 114.3 11.3 82 172-253 39-122 (162)
50 3jzv_A Uncharacterized protein 99.5 8.8E-14 3E-18 115.5 11.5 89 46-136 37-127 (166)
51 2f4p_A Hypothetical protein TM 99.5 1.6E-13 5.4E-18 111.2 12.5 97 154-252 23-121 (147)
52 3fjs_A Uncharacterized protein 99.5 6.5E-14 2.2E-18 108.7 9.5 73 60-133 33-105 (114)
53 3ksc_A LEGA class, prolegumin; 99.5 7E-13 2.4E-17 126.9 18.6 74 178-253 357-437 (496)
54 4i4a_A Similar to unknown prot 99.5 3.3E-13 1.1E-17 105.6 12.7 86 165-251 19-105 (128)
55 1v70_A Probable antibiotics sy 99.5 1.5E-13 5.2E-18 102.5 10.1 85 164-252 16-101 (105)
56 3lwc_A Uncharacterized protein 99.5 1.6E-13 5.6E-18 107.8 10.6 86 162-250 23-108 (119)
57 3i7d_A Sugar phosphate isomera 99.5 1.5E-13 5.1E-18 113.4 10.6 86 50-136 29-121 (163)
58 3fjs_A Uncharacterized protein 99.5 1.9E-13 6.3E-18 106.1 10.5 76 178-254 35-110 (114)
59 4e2g_A Cupin 2 conserved barre 99.5 2.3E-13 7.7E-18 106.3 11.0 96 151-252 16-112 (126)
60 2pfw_A Cupin 2, conserved barr 99.5 2.5E-13 8.7E-18 104.3 11.1 85 48-136 22-106 (116)
61 2pyt_A Ethanolamine utilizatio 99.5 1E-13 3.5E-18 111.1 9.1 81 51-135 46-126 (133)
62 2gu9_A Tetracenomycin polyketi 99.5 2E-13 6.7E-18 103.8 10.2 76 177-252 19-96 (113)
63 2b8m_A Hypothetical protein MJ 99.5 1.5E-13 5.1E-18 106.2 9.7 76 178-254 26-102 (117)
64 3s7i_A Allergen ARA H 1, clone 99.5 2.3E-12 8E-17 121.2 19.3 192 61-257 42-369 (418)
65 1o4t_A Putative oxalate decarb 99.5 2.5E-13 8.5E-18 108.0 10.6 84 51-135 43-131 (133)
66 3fz3_A Prunin; TREE NUT allerg 99.5 1.7E-12 5.7E-17 124.6 18.0 74 178-253 393-473 (531)
67 1sq4_A GLXB, glyoxylate-induce 99.5 2.5E-13 8.7E-18 121.4 11.6 91 163-253 50-143 (278)
68 2ozi_A Hypothetical protein RP 99.5 4.9E-14 1.7E-18 107.2 5.9 72 178-250 16-91 (98)
69 3l2h_A Putative sugar phosphat 99.5 3E-13 1E-17 110.6 11.1 84 52-136 34-123 (162)
70 1sef_A Conserved hypothetical 99.5 5.5E-13 1.9E-17 118.6 13.6 88 47-135 166-257 (274)
71 1v70_A Probable antibiotics sy 99.5 3E-13 1E-17 100.9 10.1 75 60-135 25-102 (105)
72 3cew_A Uncharacterized cupin p 99.5 2.4E-13 8E-18 106.4 9.8 77 176-252 23-100 (125)
73 3lag_A Uncharacterized protein 99.5 4.2E-14 1.5E-18 107.4 5.2 73 178-250 16-91 (98)
74 4e2q_A Ureidoglycine aminohydr 99.5 2.8E-13 9.5E-18 120.4 11.0 99 153-254 43-143 (266)
75 2ozj_A Cupin 2, conserved barr 99.5 5.8E-13 2E-17 102.4 11.4 73 62-135 37-109 (114)
76 1rc6_A Hypothetical protein YL 99.5 3.9E-13 1.3E-17 118.6 11.9 91 163-253 43-134 (261)
77 1y9q_A Transcriptional regulat 99.4 3.6E-13 1.2E-17 113.0 10.7 88 163-251 88-176 (192)
78 1dgw_A Canavalin; duplicated s 99.4 3.9E-13 1.3E-17 112.5 10.6 78 177-255 39-121 (178)
79 2gu9_A Tetracenomycin polyketi 99.4 6.7E-13 2.3E-17 100.8 11.0 76 60-136 18-98 (113)
80 2pfw_A Cupin 2, conserved barr 99.4 1.8E-12 6E-17 99.6 13.4 96 149-251 8-103 (116)
81 3h8u_A Uncharacterized conserv 99.4 8.6E-13 2.9E-17 102.9 11.7 76 61-136 37-115 (125)
82 4axo_A EUTQ, ethanolamine util 99.4 3.9E-13 1.3E-17 110.0 9.5 86 48-136 51-136 (151)
83 1yhf_A Hypothetical protein SP 99.4 7E-13 2.4E-17 101.7 10.3 73 61-134 38-110 (115)
84 3bu7_A Gentisate 1,2-dioxygena 99.4 5E-13 1.7E-17 124.8 11.3 77 176-253 120-198 (394)
85 2b8m_A Hypothetical protein MJ 99.4 7E-13 2.4E-17 102.4 10.3 75 61-136 25-102 (117)
86 4e2g_A Cupin 2 conserved barre 99.4 5E-13 1.7E-17 104.3 9.6 76 60-136 38-114 (126)
87 2oa2_A BH2720 protein; 1017534 99.4 5.1E-13 1.8E-17 108.0 9.6 75 178-252 42-122 (148)
88 3nw4_A Gentisate 1,2-dioxygena 99.4 3.2E-13 1.1E-17 125.0 9.4 76 177-253 101-177 (368)
89 1yhf_A Hypothetical protein SP 99.4 2.6E-12 8.8E-17 98.5 12.4 86 163-252 27-112 (115)
90 1lr5_A Auxin binding protein 1 99.4 1.6E-12 5.6E-17 106.4 11.2 89 47-136 23-125 (163)
91 1uij_A Beta subunit of beta co 99.4 7.3E-13 2.5E-17 124.8 10.1 76 178-254 48-128 (416)
92 2xlg_A SLL1785 protein, CUCA; 99.4 9.4E-13 3.2E-17 115.4 10.0 82 170-251 34-136 (239)
93 2oa2_A BH2720 protein; 1017534 99.4 3.1E-12 1.1E-16 103.3 12.2 76 60-136 40-124 (148)
94 1x82_A Glucose-6-phosphate iso 99.4 2E-12 6.8E-17 109.3 11.2 81 171-252 59-153 (190)
95 2f4p_A Hypothetical protein TM 99.4 3.3E-12 1.1E-16 103.4 11.9 86 49-135 33-122 (147)
96 2d40_A Z3393, putative gentisa 99.4 2.1E-12 7.2E-17 119.2 12.0 105 148-253 55-174 (354)
97 4h7l_A Uncharacterized protein 99.4 2.4E-12 8E-17 105.8 10.7 99 145-251 15-115 (157)
98 3es1_A Cupin 2, conserved barr 99.4 1.2E-12 4.3E-17 109.2 9.1 73 177-251 77-150 (172)
99 2vpv_A Protein MIF2, MIF2P; nu 99.4 1.9E-12 6.5E-17 107.5 10.1 74 178-251 87-161 (166)
100 2ea7_A 7S globulin-1; beta bar 99.4 1.2E-12 4E-17 123.9 9.7 76 178-254 60-140 (434)
101 2ozj_A Cupin 2, conserved barr 99.4 6.3E-12 2.2E-16 96.5 11.9 79 166-250 28-106 (114)
102 3h7j_A Bacilysin biosynthesis 99.4 3.7E-12 1.3E-16 111.3 11.2 87 164-255 23-110 (243)
103 4axo_A EUTQ, ethanolamine util 99.3 6E-12 2.1E-16 102.9 10.7 85 162-251 49-133 (151)
104 2cav_A Protein (canavalin); vi 99.3 3.6E-12 1.2E-16 120.9 10.6 75 178-253 85-164 (445)
105 1x82_A Glucose-6-phosphate iso 99.3 9.9E-12 3.4E-16 105.0 12.2 80 55-135 59-154 (190)
106 1dgw_A Canavalin; duplicated s 99.3 3.9E-12 1.3E-16 106.4 9.5 75 61-136 39-120 (178)
107 2pyt_A Ethanolamine utilizatio 99.3 6.4E-12 2.2E-16 100.6 9.6 83 163-251 42-124 (133)
108 2q30_A Uncharacterized protein 99.3 4.9E-12 1.7E-16 95.7 8.4 75 60-135 30-107 (110)
109 4i4a_A Similar to unknown prot 99.3 2E-11 6.9E-16 95.3 12.0 74 60-134 31-106 (128)
110 2vqa_A SLL1358 protein, MNCA; 99.3 2.3E-11 7.7E-16 111.5 14.1 105 148-255 21-133 (361)
111 3cew_A Uncharacterized cupin p 99.3 7.9E-12 2.7E-16 97.6 8.6 84 52-136 14-102 (125)
112 2i45_A Hypothetical protein; n 99.3 7.2E-12 2.4E-16 95.3 8.0 68 66-135 31-100 (107)
113 3rns_A Cupin 2 conserved barre 99.3 1.4E-11 4.9E-16 106.5 10.1 73 61-134 151-224 (227)
114 2q30_A Uncharacterized protein 99.3 3.2E-11 1.1E-15 91.2 10.6 67 178-245 32-101 (110)
115 2xlg_A SLL1785 protein, CUCA; 99.3 1.1E-11 3.7E-16 108.7 8.3 78 57-134 37-137 (239)
116 2o8q_A Hypothetical protein; c 99.2 2E-11 6.8E-16 96.3 8.7 74 60-134 38-116 (134)
117 1fi2_A Oxalate oxidase, germin 99.2 3E-11 1E-15 102.7 9.5 76 177-253 70-154 (201)
118 4b29_A Dimethylsulfoniopropion 99.2 3.5E-11 1.2E-15 103.4 9.9 90 50-141 116-210 (217)
119 2opk_A Hypothetical protein; p 99.2 6.8E-11 2.3E-15 91.4 10.6 70 62-133 30-107 (112)
120 1y3t_A Hypothetical protein YX 99.2 4.1E-11 1.4E-15 108.3 10.3 84 166-251 32-117 (337)
121 2o8q_A Hypothetical protein; c 99.2 4.9E-11 1.7E-15 94.0 9.6 69 181-251 45-115 (134)
122 1o5u_A Novel thermotoga mariti 99.2 3.8E-11 1.3E-15 91.6 7.9 66 183-251 35-101 (101)
123 4b29_A Dimethylsulfoniopropion 99.2 5E-11 1.7E-15 102.4 9.4 79 169-249 119-201 (217)
124 2ozi_A Hypothetical protein RP 99.2 1.5E-11 5.1E-16 93.4 5.3 76 60-135 14-94 (98)
125 2e9q_A 11S globulin subunit be 99.2 6.8E-11 2.3E-15 112.5 10.6 88 167-255 48-164 (459)
126 2o1q_A Putative acetyl/propion 99.2 2.6E-11 8.9E-16 98.2 6.5 97 149-249 11-114 (145)
127 1j58_A YVRK protein; cupin, de 99.2 7.3E-11 2.5E-15 109.2 10.4 88 48-136 240-337 (385)
128 3bcw_A Uncharacterized protein 99.2 1E-10 3.4E-15 92.4 9.6 73 61-134 47-119 (123)
129 1fxz_A Glycinin G1; proglycini 99.2 6.2E-11 2.1E-15 113.3 10.0 91 161-254 29-149 (476)
130 2d5f_A Glycinin A3B4 subunit; 99.2 7.4E-11 2.5E-15 113.2 10.5 88 167-255 30-150 (493)
131 1o5u_A Novel thermotoga mariti 99.2 6E-11 2E-15 90.5 7.6 64 67-133 35-99 (101)
132 3c3v_A Arachin ARAH3 isoform; 99.2 7E-11 2.4E-15 113.5 9.2 90 166-256 32-164 (510)
133 2phl_A Phaseolin; plant SEED s 99.2 9.6E-11 3.3E-15 109.6 9.9 76 178-254 51-137 (397)
134 2qnk_A 3-hydroxyanthranilate 3 99.2 1.5E-09 5.1E-14 96.1 16.8 186 72-259 40-285 (286)
135 3d82_A Cupin 2, conserved barr 99.1 2.7E-10 9.1E-15 84.9 10.3 59 75-134 41-100 (102)
136 2qjv_A Uncharacterized IOLB-li 99.1 1E-08 3.5E-13 90.9 21.8 172 63-241 29-234 (270)
137 1fi2_A Oxalate oxidase, germin 99.1 1.5E-10 5E-15 98.4 9.3 75 60-134 69-153 (201)
138 2opk_A Hypothetical protein; p 99.1 2.5E-10 8.4E-15 88.2 9.5 64 187-250 38-106 (112)
139 3lag_A Uncharacterized protein 99.1 5.7E-11 2E-15 90.0 5.1 74 61-135 15-94 (98)
140 2qdr_A Uncharacterized protein 99.1 6.5E-09 2.2E-13 90.7 18.2 174 42-237 71-264 (303)
141 3ebr_A Uncharacterized RMLC-li 99.1 4.7E-10 1.6E-14 92.4 10.1 99 149-252 11-114 (159)
142 4h7l_A Uncharacterized protein 99.1 7.6E-10 2.6E-14 90.8 11.0 80 52-136 36-118 (157)
143 2i45_A Hypothetical protein; n 99.1 2.1E-10 7.2E-15 87.0 6.9 66 183-252 32-99 (107)
144 3d82_A Cupin 2, conserved barr 99.0 1.8E-09 6.1E-14 80.3 9.7 68 180-252 32-100 (102)
145 3qac_A 11S globulin SEED stora 99.0 1.1E-09 3.8E-14 104.1 10.2 88 167-255 35-167 (465)
146 1juh_A Quercetin 2,3-dioxygena 99.0 1.8E-09 6.1E-14 99.3 10.9 83 167-251 35-126 (350)
147 3cjx_A Protein of unknown func 99.0 2.7E-09 9.1E-14 88.4 10.6 105 146-253 9-117 (165)
148 3bcw_A Uncharacterized protein 99.0 1.5E-09 5.1E-14 85.6 7.8 72 178-251 48-120 (123)
149 2o1q_A Putative acetyl/propion 98.8 2.9E-09 1E-13 86.0 5.9 84 47-133 29-116 (145)
150 3ksc_A LEGA class, prolegumin; 98.8 8.9E-09 3E-13 98.6 9.5 89 167-256 31-148 (496)
151 3cjx_A Protein of unknown func 98.8 1.1E-08 3.7E-13 84.7 8.8 104 29-135 9-117 (165)
152 2q1z_B Anti-sigma factor CHRR, 98.8 1.6E-08 5.5E-13 85.7 10.0 94 149-251 99-192 (195)
153 3st7_A Capsular polysaccharide 98.8 7.8E-09 2.7E-13 94.1 7.2 75 179-253 272-354 (369)
154 1vr3_A Acireductone dioxygenas 98.8 3E-08 1E-12 83.8 9.9 69 180-249 75-158 (191)
155 2arc_A ARAC, arabinose operon 98.8 4.5E-08 1.5E-12 78.5 10.5 80 171-250 4-89 (164)
156 3s7i_A Allergen ARA H 1, clone 98.7 3.1E-08 1.1E-12 93.2 10.3 77 177-254 42-123 (418)
157 3kgl_A Cruciferin; 11S SEED gl 98.7 3.6E-08 1.2E-12 93.7 10.7 89 167-256 28-183 (466)
158 1zrr_A E-2/E-2' protein; nicke 98.7 1.4E-08 4.9E-13 85.1 4.6 67 182-249 74-153 (179)
159 3ebr_A Uncharacterized RMLC-li 98.6 1.2E-07 4.2E-12 77.9 8.7 84 46-133 26-113 (159)
160 1yfu_A 3-hydroxyanthranilate-3 98.6 1.2E-07 4.1E-12 78.5 8.5 67 70-136 42-112 (174)
161 1vr3_A Acireductone dioxygenas 98.6 2.5E-07 8.6E-12 78.2 9.4 68 77-146 98-170 (191)
162 3fz3_A Prunin; TREE NUT allerg 98.6 2.3E-07 8E-12 89.0 10.2 89 167-256 33-210 (531)
163 2q1z_B Anti-sigma factor CHRR, 98.5 3.1E-07 1.1E-11 77.7 9.7 68 62-134 124-193 (195)
164 2y0o_A Probable D-lyxose ketol 98.5 2.8E-07 9.6E-12 76.8 8.7 78 179-257 53-157 (175)
165 1ywk_A 4-deoxy-L-threo-5-hexos 98.5 1.2E-05 4E-10 71.7 19.2 174 68-249 62-259 (289)
166 2p17_A Pirin-like protein; GK1 98.5 5.8E-05 2E-09 67.1 23.2 183 62-251 38-240 (277)
167 1xru_A 4-deoxy-L-threo-5-hexos 98.5 9.4E-06 3.2E-10 72.1 17.6 162 80-249 76-259 (282)
168 3o14_A Anti-ecfsigma factor, C 98.5 5.4E-07 1.8E-11 77.9 9.4 91 151-248 15-105 (223)
169 2arc_A ARAC, arabinose operon 98.5 1.3E-06 4.3E-11 69.8 11.0 69 66-135 16-92 (164)
170 1tq5_A Protein YHHW; bicupin, 98.5 3.2E-05 1.1E-09 67.5 20.6 167 67-251 45-226 (242)
171 3es4_A Uncharacterized protein 98.4 3.2E-06 1.1E-10 65.8 12.1 72 62-134 41-112 (116)
172 3bal_A Acetylacetone-cleaving 98.4 5.8E-07 2E-11 73.3 7.6 103 29-133 10-118 (153)
173 3bal_A Acetylacetone-cleaving 98.4 6.9E-07 2.4E-11 72.9 7.7 90 148-239 12-107 (153)
174 1zvf_A 3-hydroxyanthranilate 3 98.4 8.7E-07 3E-11 73.3 8.3 65 72-136 43-114 (176)
175 3eqe_A Putative cystein deoxyg 98.4 2.3E-06 7.9E-11 71.1 10.4 79 60-139 66-153 (171)
176 2y0o_A Probable D-lyxose ketol 98.4 1.5E-06 5E-11 72.5 8.9 65 62-127 52-145 (175)
177 2vec_A YHAK, pirin-like protei 98.3 0.00011 3.7E-09 64.7 20.4 171 65-251 66-252 (256)
178 1j1l_A Pirin; beta sandwich, c 98.3 4.7E-05 1.6E-09 68.2 18.3 184 63-251 39-241 (290)
179 2gm6_A Cysteine dioxygenase ty 98.3 3.8E-06 1.3E-10 71.8 10.0 75 51-125 67-153 (208)
180 2vec_A YHAK, pirin-like protei 98.2 4.9E-06 1.7E-10 73.3 10.1 80 171-250 54-139 (256)
181 1zrr_A E-2/E-2' protein; nicke 98.2 4E-07 1.4E-11 76.2 1.1 50 77-126 94-146 (179)
182 1tq5_A Protein YHHW; bicupin, 98.1 1.4E-05 4.9E-10 69.7 10.1 79 172-250 32-116 (242)
183 3eqe_A Putative cystein deoxyg 98.1 1.1E-05 3.6E-10 67.1 8.4 81 166-249 58-148 (171)
184 3d0j_A Uncharacterized protein 98.1 5.3E-06 1.8E-10 66.3 6.0 56 80-136 47-110 (140)
185 3uss_A Putative uncharacterize 98.0 3.7E-05 1.3E-09 65.8 10.9 74 52-125 62-147 (211)
186 3myx_A Uncharacterized protein 98.0 5.9E-05 2E-09 65.7 12.2 72 61-133 165-236 (238)
187 1qwr_A Mannose-6-phosphate iso 98.0 6.4E-05 2.2E-09 68.1 12.6 147 81-235 115-304 (319)
188 3es4_A Uncharacterized protein 98.0 8.3E-05 2.8E-09 57.8 11.4 91 149-241 6-103 (116)
189 2gm6_A Cysteine dioxygenase ty 98.0 4.3E-05 1.5E-09 65.2 10.2 83 166-249 66-162 (208)
190 1yfu_A 3-hydroxyanthranilate-3 97.9 2.3E-05 7.9E-10 64.9 7.8 56 186-242 42-101 (174)
191 3eln_A Cysteine dioxygenase ty 97.9 6.4E-05 2.2E-09 63.8 10.4 79 61-139 68-159 (200)
192 2qnk_A 3-hydroxyanthranilate 3 97.9 3.3E-05 1.1E-09 68.4 8.6 65 70-136 214-278 (286)
193 3gbg_A TCP pilus virulence reg 97.9 2.6E-05 8.7E-10 68.0 7.7 71 177-248 5-81 (276)
194 2wfp_A Mannose-6-phosphate iso 97.8 0.00018 6E-09 67.1 12.3 123 103-234 241-376 (394)
195 1pmi_A PMI, phosphomannose iso 97.8 0.00077 2.6E-08 63.6 15.9 64 177-241 355-423 (440)
196 1zvf_A 3-hydroxyanthranilate 3 97.7 0.00012 4.1E-09 60.5 7.7 53 188-241 43-103 (176)
197 3st7_A Capsular polysaccharide 97.5 0.00016 5.4E-09 65.4 7.6 76 65-140 274-360 (369)
198 1zx5_A Mannosephosphate isomer 97.4 0.00036 1.2E-08 62.7 7.6 121 103-235 159-282 (300)
199 3uss_A Putative uncharacterize 97.3 0.0015 5.2E-08 55.7 10.4 81 166-247 60-154 (211)
200 3d0j_A Uncharacterized protein 97.3 0.0012 4.2E-08 52.6 9.1 76 178-255 24-111 (140)
201 3gbg_A TCP pilus virulence reg 97.2 0.00059 2E-08 59.2 7.2 71 62-134 6-85 (276)
202 3eln_A Cysteine dioxygenase ty 97.2 0.0017 5.9E-08 54.9 9.1 80 166-247 58-152 (200)
203 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.0 0.0031 1.1E-07 50.5 9.0 80 178-258 34-118 (141)
204 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.9 0.0022 7.5E-08 51.4 7.0 74 66-139 38-118 (141)
205 2p17_A Pirin-like protein; GK1 96.7 0.017 5.8E-07 51.1 11.8 88 161-249 18-112 (277)
206 1j1l_A Pirin; beta sandwich, c 96.6 0.012 4.3E-07 52.4 10.6 89 161-249 18-114 (290)
207 3ejk_A DTDP sugar isomerase; Y 96.6 0.017 5.7E-07 47.8 10.3 70 184-253 58-141 (174)
208 2oyz_A UPF0345 protein VPA0057 96.0 0.031 1.1E-06 41.5 8.0 63 67-132 27-91 (94)
209 1yll_A PA5104, conserved hypot 95.7 0.36 1.2E-05 40.6 14.3 144 50-236 25-177 (200)
210 3hqx_A UPF0345 protein aciad03 95.7 0.07 2.4E-06 40.7 8.7 64 67-132 41-107 (111)
211 2qjv_A Uncharacterized IOLB-li 95.6 0.055 1.9E-06 47.7 9.0 83 167-252 16-109 (270)
212 3ejk_A DTDP sugar isomerase; Y 95.3 0.094 3.2E-06 43.2 9.3 73 68-140 58-147 (174)
213 3kmh_A D-lyxose isomerase; cup 95.3 0.21 7.2E-06 43.1 11.5 81 177-257 104-212 (246)
214 3rcq_A Aspartyl/asparaginyl be 95.2 0.083 2.9E-06 44.4 8.8 76 180-257 103-184 (197)
215 3rcq_A Aspartyl/asparaginyl be 95.0 0.098 3.4E-06 44.0 8.5 75 64-139 103-184 (197)
216 3eo6_A Protein of unknown func 95.0 0.078 2.7E-06 40.1 7.0 63 67-132 40-104 (106)
217 1yud_A Hypothetical protein SO 95.0 0.24 8.3E-06 40.6 10.5 66 176-242 46-124 (170)
218 1eyb_A Homogentisate 1,2-dioxy 94.9 0.2 6.9E-06 47.2 11.2 72 62-136 156-230 (471)
219 1e5r_A Proline oxidase; oxidor 94.7 0.035 1.2E-06 49.5 5.4 70 179-250 92-172 (290)
220 1qwr_A Mannose-6-phosphate iso 94.7 0.11 3.9E-06 46.6 8.8 67 61-132 249-316 (319)
221 1pmi_A PMI, phosphomannose iso 94.7 0.13 4.4E-06 48.4 9.3 65 60-125 354-423 (440)
222 4gjz_A Lysine-specific demethy 94.6 0.084 2.9E-06 44.0 7.2 25 219-243 202-226 (235)
223 3esg_A HUTD, putative uncharac 94.2 0.69 2.4E-05 38.7 11.7 100 31-136 12-121 (193)
224 1e5r_A Proline oxidase; oxidor 94.1 0.03 1E-06 49.9 3.5 74 62-136 90-175 (290)
225 1dgw_X Canavalin; duplicated s 94.0 0.05 1.7E-06 39.0 3.8 38 61-98 34-72 (79)
226 2wfp_A Mannose-6-phosphate iso 93.7 0.13 4.4E-06 47.7 7.1 61 60-123 321-382 (394)
227 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 93.6 0.38 1.3E-05 39.9 9.1 62 188-250 57-133 (185)
228 4gjz_A Lysine-specific demethy 93.4 0.24 8.2E-06 41.1 7.7 57 70-126 130-225 (235)
229 3bb6_A Uncharacterized protein 93.4 0.32 1.1E-05 38.0 7.7 60 188-248 23-94 (127)
230 1dgw_X Canavalin; duplicated s 93.4 0.12 4E-06 37.0 4.9 38 177-215 34-72 (79)
231 1zx5_A Mannosephosphate isomer 93.3 0.34 1.2E-05 43.1 8.8 58 61-123 228-287 (300)
232 2oyz_A UPF0345 protein VPA0057 93.2 0.33 1.1E-05 35.9 7.1 61 186-251 30-92 (94)
233 3of1_A CAMP-dependent protein 93.0 0.38 1.3E-05 39.6 8.4 151 67-228 32-196 (246)
234 2ixk_A DTDP-4-dehydrorhamnose 93.0 0.49 1.7E-05 39.2 8.8 63 188-251 58-135 (184)
235 1wlt_A 176AA long hypothetical 92.4 0.76 2.6E-05 38.5 9.2 63 187-250 73-151 (196)
236 3eo6_A Protein of unknown func 92.3 0.43 1.5E-05 36.0 6.8 81 163-251 23-105 (106)
237 1vrb_A Putative asparaginyl hy 92.3 0.42 1.5E-05 43.2 8.2 57 69-125 146-241 (342)
238 1dgw_Y Canavalin; duplicated s 92.1 0.23 7.8E-06 36.7 5.1 34 219-254 7-40 (93)
239 1dzr_A DTDP-4-dehydrorhamnose 92.1 0.84 2.9E-05 37.7 9.1 62 188-250 56-133 (183)
240 3kmh_A D-lyxose isomerase; cup 91.4 2 7E-05 36.9 10.9 63 61-124 104-194 (246)
241 3bb6_A Uncharacterized protein 91.4 1 3.6E-05 35.1 8.3 59 72-130 23-94 (127)
242 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 91.4 0.48 1.6E-05 39.7 6.9 73 66-139 63-148 (197)
243 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 91.3 0.55 1.9E-05 38.9 7.1 69 72-140 57-142 (185)
244 1yud_A Hypothetical protein SO 91.2 0.68 2.3E-05 37.9 7.5 63 63-125 49-122 (170)
245 1oi6_A PCZA361.16; epimerase, 91.0 1.6 5.5E-05 36.7 9.8 63 187-250 55-133 (205)
246 4diq_A Lysine-specific demethy 90.9 0.56 1.9E-05 44.6 7.6 59 186-245 170-255 (489)
247 2qdr_A Uncharacterized protein 90.8 2.7 9.2E-05 36.8 11.1 78 167-251 81-159 (303)
248 1vrb_A Putative asparaginyl hy 90.8 1.3 4.5E-05 39.9 9.8 32 218-249 218-249 (342)
249 2ixk_A DTDP-4-dehydrorhamnose 90.5 0.71 2.4E-05 38.2 7.1 68 72-140 58-143 (184)
250 3ryk_A DTDP-4-dehydrorhamnose 90.4 1.1 3.7E-05 37.8 8.2 79 62-140 67-165 (205)
251 1ywk_A 4-deoxy-L-threo-5-hexos 90.3 0.76 2.6E-05 40.7 7.4 67 183-249 61-130 (289)
252 1upi_A DTDP-4-dehydrorhamnose 90.2 2.2 7.4E-05 36.5 10.1 63 187-250 74-152 (225)
253 3ryk_A DTDP-4-dehydrorhamnose 89.8 2.6 8.8E-05 35.4 10.1 67 182-249 73-155 (205)
254 1wlt_A 176AA long hypothetical 89.8 1.2 4E-05 37.3 7.9 69 71-140 73-160 (196)
255 3dl3_A Tellurite resistance pr 89.7 0.99 3.4E-05 34.8 6.8 51 81-131 36-93 (119)
256 4diq_A Lysine-specific demethy 89.7 2.3 8E-05 40.3 10.8 72 67-138 167-265 (489)
257 2xdv_A MYC-induced nuclear ant 89.3 1.8 6.2E-05 40.5 9.7 55 70-124 145-221 (442)
258 1yll_A PA5104, conserved hypot 89.1 0.53 1.8E-05 39.5 5.3 52 82-134 139-194 (200)
259 3d8c_A Hypoxia-inducible facto 88.8 0.9 3.1E-05 41.1 7.1 26 218-243 261-286 (349)
260 2ypd_A Probable JMJC domain-co 88.5 0.23 7.8E-06 45.8 2.8 29 215-243 290-318 (392)
261 3hqx_A UPF0345 protein aciad03 88.2 2.2 7.4E-05 32.4 7.6 82 163-250 24-107 (111)
262 1upi_A DTDP-4-dehydrorhamnose 88.1 2.6 8.9E-05 35.9 9.0 69 71-140 74-161 (225)
263 2c0z_A NOVW; isomerase, epimer 87.9 2.2 7.5E-05 36.2 8.4 63 187-250 63-141 (216)
264 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 87.8 2.2 7.4E-05 35.7 8.2 65 183-250 65-140 (197)
265 1oi6_A PCZA361.16; epimerase, 87.7 2.3 7.9E-05 35.7 8.4 58 82-140 70-142 (205)
266 3g7d_A PHPD; non heme Fe(II) d 86.7 7.2 0.00025 35.3 11.3 69 62-133 333-405 (443)
267 3al5_A HTYW5, JMJC domain-cont 86.3 3.4 0.00012 37.0 9.3 55 72-126 176-264 (338)
268 1dzr_A DTDP-4-dehydrorhamnose 85.9 2.9 9.9E-05 34.4 7.9 69 72-140 56-142 (183)
269 3bpz_A Potassium/sodium hyperp 84.8 1.4 4.7E-05 35.6 5.4 68 67-134 97-169 (202)
270 1xru_A 4-deoxy-L-threo-5-hexos 84.4 1.8 6.2E-05 38.2 6.2 50 200-249 79-130 (282)
271 2c0z_A NOVW; isomerase, epimer 83.6 2.8 9.7E-05 35.5 7.0 69 71-140 63-150 (216)
272 2xdv_A MYC-induced nuclear ant 83.6 1.5 5E-05 41.1 5.7 25 218-242 199-223 (442)
273 3al5_A HTYW5, JMJC domain-cont 83.0 1.5 5.3E-05 39.3 5.4 27 218-244 240-266 (338)
274 3d8c_A Hypoxia-inducible facto 82.9 2.6 9E-05 38.0 6.9 54 72-125 192-284 (349)
275 3dl3_A Tellurite resistance pr 82.4 5.5 0.00019 30.6 7.5 50 202-251 40-99 (119)
276 3g7d_A PHPD; non heme Fe(II) d 81.9 1.7 5.8E-05 39.4 5.0 43 200-242 354-400 (443)
277 2d93_A RAP guanine nucleotide 81.4 1.6 5.3E-05 32.5 4.2 68 67-134 41-115 (134)
278 4hn1_A Putative 3-epimerase in 81.1 8.9 0.00031 32.0 9.0 57 82-139 67-138 (201)
279 3ocp_A PRKG1 protein; serine/t 81.1 3.4 0.00012 30.7 6.1 67 67-134 48-120 (139)
280 1vp6_A CNBD, cyclic-nucleotide 81.0 1.4 4.6E-05 32.8 3.7 65 180-246 33-102 (138)
281 2d93_A RAP guanine nucleotide 80.9 1.5 5.1E-05 32.7 3.9 48 180-228 38-87 (134)
282 3pna_A CAMP-dependent protein 80.9 3.3 0.00011 31.6 6.0 67 67-134 63-135 (154)
283 4f8a_A Potassium voltage-gated 80.6 10 0.00035 28.4 8.8 67 67-134 52-126 (160)
284 2ypd_A Probable JMJC domain-co 80.5 2 6.7E-05 39.6 5.1 27 100-126 291-317 (392)
285 3pna_A CAMP-dependent protein 80.0 2.9 9.9E-05 31.9 5.4 48 180-228 60-108 (154)
286 4hn1_A Putative 3-epimerase in 79.7 12 0.00041 31.2 9.4 61 187-248 52-128 (201)
287 2qcs_B CAMP-dependent protein 79.3 5.4 0.00019 33.6 7.4 152 66-228 63-233 (291)
288 1we3_O CPN10(groes); chaperoni 77.7 2.2 7.4E-05 31.9 3.7 49 202-253 42-92 (100)
289 3mdp_A Cyclic nucleotide-bindi 77.6 4.9 0.00017 29.6 5.9 49 180-229 28-85 (142)
290 3ryp_A Catabolite gene activat 77.0 9.7 0.00033 30.1 8.0 69 67-135 21-100 (210)
291 2fmy_A COOA, carbon monoxide o 76.5 15 0.0005 29.4 9.0 67 67-135 29-99 (220)
292 3bpz_A Potassium/sodium hyperp 76.3 2.6 8.8E-05 33.9 4.2 68 180-248 94-167 (202)
293 1ft9_A Carbon monoxide oxidati 76.2 15 0.00051 29.5 9.0 66 67-134 25-94 (222)
294 3mdp_A Cyclic nucleotide-bindi 75.7 8.1 0.00028 28.3 6.7 69 66-134 30-111 (142)
295 3ocp_A PRKG1 protein; serine/t 75.5 4.8 0.00016 29.9 5.3 48 180-228 45-93 (139)
296 2pqq_A Putative transcriptiona 74.9 3.9 0.00013 30.4 4.7 48 180-228 27-80 (149)
297 3k2o_A Bifunctional arginine d 74.9 2.2 7.6E-05 38.4 3.8 26 218-243 256-281 (336)
298 3ryp_A Catabolite gene activat 74.7 6.3 0.00022 31.3 6.2 49 180-229 18-72 (210)
299 1vp6_A CNBD, cyclic-nucleotide 74.6 3.3 0.00011 30.6 4.2 66 67-134 36-106 (138)
300 2z69_A DNR protein; beta barre 74.5 7.1 0.00024 29.1 6.2 69 67-135 37-116 (154)
301 2xxz_A Lysine-specific demethy 74.5 1.8 6.3E-05 39.0 3.1 23 221-243 282-304 (332)
302 3d0s_A Transcriptional regulat 73.6 13 0.00045 29.8 8.0 69 67-135 31-109 (227)
303 3ukn_A Novel protein similar t 73.2 11 0.00038 30.2 7.4 67 67-134 100-174 (212)
304 2zcw_A TTHA1359, transcription 73.0 4.2 0.00014 32.4 4.7 68 181-249 5-84 (202)
305 2oz6_A Virulence factor regula 72.7 16 0.00054 28.7 8.2 69 67-135 15-97 (207)
306 2z69_A DNR protein; beta barre 72.6 7.8 0.00027 28.9 6.0 64 180-244 34-109 (154)
307 2yu1_A JMJC domain-containing 71.8 3.1 0.0001 39.1 4.0 28 216-243 264-291 (451)
308 1ft9_A Carbon monoxide oxidati 70.9 18 0.00062 29.0 8.2 62 180-244 22-88 (222)
309 3k2o_A Bifunctional arginine d 70.2 7.2 0.00025 35.0 6.0 26 103-128 257-282 (336)
310 4f8a_A Potassium voltage-gated 70.1 8.2 0.00028 29.0 5.6 50 180-230 49-99 (160)
311 3ukn_A Novel protein similar t 70.0 6.1 0.00021 31.8 5.1 50 179-229 96-146 (212)
312 2ptm_A Hyperpolarization-activ 69.8 7.5 0.00025 30.9 5.5 68 67-134 96-169 (198)
313 3shr_A CGMP-dependent protein 69.2 6 0.00021 33.6 5.1 151 67-228 64-233 (299)
314 2ptm_A Hyperpolarization-activ 68.9 6.5 0.00022 31.3 5.0 66 180-246 93-165 (198)
315 3nx6_A 10KDA chaperonin; bacte 68.9 9.9 0.00034 27.9 5.5 49 202-253 37-87 (95)
316 2pqq_A Putative transcriptiona 68.2 9.7 0.00033 28.1 5.6 68 67-134 30-107 (149)
317 3dv8_A Transcriptional regulat 67.5 14 0.00047 29.4 6.8 47 181-228 26-78 (220)
318 3b02_A Transcriptional regulat 67.4 13 0.00043 29.4 6.4 65 70-134 4-77 (195)
319 4ev0_A Transcription regulator 67.3 17 0.00059 28.7 7.3 68 67-134 24-101 (216)
320 1zyb_A Transcription regulator 67.2 15 0.00051 29.9 7.0 70 66-135 44-124 (232)
321 3dv8_A Transcriptional regulat 67.2 16 0.00054 29.1 7.1 69 67-135 28-108 (220)
322 3kcc_A Catabolite gene activat 67.0 17 0.00059 30.2 7.5 69 67-135 71-150 (260)
323 2oz6_A Virulence factor regula 66.8 13 0.00044 29.3 6.4 48 181-229 13-66 (207)
324 3d0s_A Transcriptional regulat 66.6 11 0.00038 30.3 6.1 66 180-246 28-104 (227)
325 1o5l_A Transcriptional regulat 66.5 13 0.00045 29.7 6.5 69 67-135 24-103 (213)
326 3k3o_A PHF8, PHD finger protei 66.4 3.6 0.00012 37.6 3.2 28 216-243 215-242 (371)
327 3fx3_A Cyclic nucleotide-bindi 66.1 24 0.00082 28.4 8.1 69 67-135 36-114 (237)
328 3idb_B CAMP-dependent protein 66.0 11 0.00037 28.7 5.6 49 179-228 59-112 (161)
329 3dn7_A Cyclic nucleotide bindi 65.8 9.1 0.00031 30.0 5.2 48 181-229 30-83 (194)
330 3iwz_A CAP-like, catabolite ac 65.8 21 0.00073 28.5 7.6 69 67-135 36-115 (230)
331 3pua_A GRC5, PHD finger protei 65.6 3.8 0.00013 37.8 3.2 28 216-243 242-269 (392)
332 1pcq_O Groes protein; chaperon 65.5 13 0.00046 27.3 5.6 49 202-253 37-88 (97)
333 1o5l_A Transcriptional regulat 65.5 10 0.00036 30.4 5.6 68 178-246 19-98 (213)
334 4ask_A Lysine-specific demethy 64.8 3.8 0.00013 39.0 3.1 24 220-243 315-338 (510)
335 3kv4_A PHD finger protein 8; e 64.5 5.7 0.00019 37.2 4.2 28 216-243 299-326 (447)
336 2qcs_B CAMP-dependent protein 64.4 9.8 0.00034 32.0 5.5 48 180-228 61-109 (291)
337 3idb_B CAMP-dependent protein 64.0 17 0.00059 27.5 6.5 68 67-134 63-139 (161)
338 1eyb_A Homogentisate 1,2-dioxy 63.7 23 0.00078 33.3 8.1 51 199-251 177-227 (471)
339 3e6c_C CPRK, cyclic nucleotide 63.5 28 0.00096 28.4 8.1 68 67-134 34-108 (250)
340 4ev0_A Transcription regulator 63.3 9 0.00031 30.5 4.8 64 181-245 22-96 (216)
341 3avr_A Lysine-specific demethy 63.0 4.3 0.00015 38.9 3.1 24 220-243 340-363 (531)
342 1p3h_A 10 kDa chaperonin; beta 63.0 20 0.00069 26.4 6.2 49 202-253 39-90 (99)
343 2gau_A Transcriptional regulat 62.8 5.6 0.00019 32.3 3.5 66 180-246 32-108 (232)
344 3iwz_A CAP-like, catabolite ac 61.9 9.8 0.00034 30.6 4.8 49 180-229 33-87 (230)
345 3of1_A CAMP-dependent protein 61.4 17 0.00058 29.3 6.2 66 67-134 150-223 (246)
346 2fmy_A COOA, carbon monoxide o 61.3 25 0.00087 28.0 7.3 63 180-245 26-93 (220)
347 3kv5_D JMJC domain-containing 61.1 5 0.00017 38.0 3.2 28 216-243 334-361 (488)
348 1zyb_A Transcription regulator 60.6 16 0.00054 29.7 5.9 65 181-246 43-119 (232)
349 3kcc_A Catabolite gene activat 60.4 17 0.00059 30.2 6.3 68 179-247 67-146 (260)
350 3e97_A Transcriptional regulat 60.0 38 0.0013 27.1 8.2 69 66-134 30-108 (231)
351 3b02_A Transcriptional regulat 60.0 9.9 0.00034 30.0 4.4 45 184-229 2-52 (195)
352 1dgw_Y Canavalin; duplicated s 59.3 18 0.00063 26.3 5.4 30 104-133 8-37 (93)
353 3fx3_A Cyclic nucleotide-bindi 58.6 13 0.00045 30.1 5.1 47 181-228 34-86 (237)
354 3gyd_A CNMP-BD protein, cyclic 58.2 12 0.0004 29.6 4.6 49 179-228 60-114 (187)
355 3kv9_A JMJC domain-containing 58.0 6.3 0.00022 36.4 3.2 28 216-243 243-270 (397)
356 3dn7_A Cyclic nucleotide bindi 57.6 24 0.00082 27.4 6.4 68 67-134 32-110 (194)
357 4din_B CAMP-dependent protein 57.2 9 0.00031 34.3 4.1 153 65-228 153-324 (381)
358 3kv4_A PHD finger protein 8; e 55.2 16 0.00053 34.3 5.4 27 103-129 302-328 (447)
359 3k3o_A PHF8, PHD finger protei 54.8 12 0.0004 34.2 4.4 25 102-126 217-241 (371)
360 3pua_A GRC5, PHD finger protei 53.3 14 0.00047 34.0 4.7 26 102-127 244-269 (392)
361 3shr_A CGMP-dependent protein 53.1 24 0.00081 29.7 6.0 68 67-135 182-261 (299)
362 1o7f_A CAMP-dependent RAP1 gua 52.6 26 0.0009 31.7 6.5 67 67-134 363-437 (469)
363 2yu1_A JMJC domain-containing 52.2 17 0.00057 34.1 5.1 27 102-128 266-292 (451)
364 3la7_A Global nitrogen regulat 51.8 20 0.00068 29.4 5.1 47 181-228 43-95 (243)
365 3kv5_D JMJC domain-containing 51.4 14 0.00046 35.0 4.4 25 103-127 337-361 (488)
366 3e6c_C CPRK, cyclic nucleotide 51.2 35 0.0012 27.8 6.6 63 179-243 30-101 (250)
367 4ava_A Lysine acetyltransferas 50.8 31 0.0011 29.5 6.5 69 67-135 38-115 (333)
368 1wgp_A Probable cyclic nucleot 50.6 2.2 7.5E-05 31.6 -1.0 47 181-228 29-82 (137)
369 3tnp_B CAMP-dependent protein 50.5 65 0.0022 29.1 8.8 156 66-228 169-348 (416)
370 3e97_A Transcriptional regulat 50.3 38 0.0013 27.1 6.6 49 180-229 28-82 (231)
371 2bgc_A PRFA; bacterial infecti 49.5 73 0.0025 25.6 8.3 66 68-134 21-99 (238)
372 2gau_A Transcriptional regulat 49.3 20 0.00068 28.8 4.7 69 67-135 35-113 (232)
373 3la7_A Global nitrogen regulat 49.0 72 0.0025 25.8 8.2 69 67-135 45-125 (243)
374 3gyd_A CNMP-BD protein, cyclic 48.9 24 0.00082 27.7 5.0 68 67-134 64-141 (187)
375 3dkw_A DNR protein; CRP-FNR, H 48.4 11 0.00038 30.2 3.0 49 180-229 31-85 (227)
376 1gpp_A Endonuclease PI-SCEI; h 48.3 10 0.00035 32.3 2.7 49 204-252 10-63 (237)
377 3kv9_A JMJC domain-containing 46.5 20 0.0007 32.9 4.7 26 102-127 245-270 (397)
378 4ava_A Lysine acetyltransferas 45.7 31 0.001 29.6 5.6 65 180-245 35-109 (333)
379 2zcw_A TTHA1359, transcription 45.1 25 0.00084 27.7 4.5 66 68-133 8-84 (202)
380 3pur_A Lysine-specific demethy 44.8 20 0.00069 34.2 4.4 25 103-127 367-391 (528)
381 3pur_A Lysine-specific demethy 44.2 12 0.0004 35.9 2.7 25 219-243 367-391 (528)
382 3plx_B Aspartate 1-decarboxyla 43.7 1.8 6.1E-05 32.3 -2.4 31 205-235 34-67 (102)
383 3v2d_V 50S ribosomal protein L 43.6 23 0.00078 26.2 3.7 22 211-232 3-24 (101)
384 2bgc_A PRFA; bacterial infecti 41.9 55 0.0019 26.4 6.4 67 181-250 18-97 (238)
385 1uhe_A Aspartate 1-decarboxyla 41.1 2.1 7.3E-05 31.7 -2.3 32 204-235 32-66 (97)
386 4f7z_A RAP guanine nucleotide 39.8 38 0.0013 34.3 5.9 69 65-134 65-145 (999)
387 4f7z_A RAP guanine nucleotide 39.6 38 0.0013 34.4 5.8 55 80-135 376-438 (999)
388 3r8s_R 50S ribosomal protein L 38.3 22 0.00074 26.4 2.9 22 211-232 3-24 (103)
389 2rg4_A Uncharacterized protein 38.0 42 0.0014 27.8 5.0 68 64-132 104-201 (216)
390 3dkw_A DNR protein; CRP-FNR, H 37.2 24 0.00084 28.1 3.3 69 67-135 34-113 (227)
391 1o7f_A CAMP-dependent RAP1 gua 36.9 45 0.0015 30.1 5.4 49 180-229 64-120 (469)
392 1pqh_A Aspartate 1-decarboxyla 33.8 4.7 0.00016 31.8 -1.5 52 174-235 54-109 (143)
393 4din_B CAMP-dependent protein 33.3 26 0.00088 31.2 3.1 49 179-228 151-200 (381)
394 1vc3_B L-aspartate-alpha-decar 32.8 3.3 0.00011 30.6 -2.4 31 205-235 34-68 (96)
395 3esg_A HUTD, putative uncharac 32.1 2.1E+02 0.0072 23.4 10.0 83 151-235 15-103 (193)
396 1s4c_A Protein HI0227; double- 31.9 78 0.0027 24.6 5.4 35 218-252 112-149 (155)
397 2c45_A Aspartate 1-decarboxyla 31.0 5.3 0.00018 31.4 -1.6 46 180-235 43-92 (139)
398 3tnp_B CAMP-dependent protein 30.5 56 0.0019 29.5 4.9 67 67-134 292-375 (416)
399 3cf6_E RAP guanine nucleotide 30.3 80 0.0027 30.9 6.3 67 67-134 58-132 (694)
400 3beh_A MLL3241 protein; transm 26.3 14 0.00048 32.6 0.0 49 178-228 248-296 (355)
401 2lnu_A Uncharacterized protein 25.0 71 0.0024 26.3 4.1 26 82-108 72-97 (190)
402 3cf6_E RAP guanine nucleotide 25.0 70 0.0024 31.3 4.8 45 183-228 58-104 (694)
403 1s4c_A Protein HI0227; double- 24.4 1.4E+02 0.0047 23.1 5.6 21 103-123 113-133 (155)
404 2rg4_A Uncharacterized protein 23.7 1.3E+02 0.0045 24.6 5.7 63 180-243 104-194 (216)
405 3opt_A DNA damage-responsive t 23.5 51 0.0017 30.0 3.2 25 219-243 306-330 (373)
406 3dxt_A JMJC domain-containing 23.2 51 0.0017 29.8 3.1 26 219-244 263-288 (354)
407 2hc8_A PACS, cation-transporti 22.3 1.1E+02 0.0037 22.5 4.4 15 221-235 29-43 (113)
408 3v2d_V 50S ribosomal protein L 21.8 89 0.0031 22.9 3.7 22 94-116 3-24 (101)
409 3r8s_R 50S ribosomal protein L 21.1 79 0.0027 23.3 3.3 21 95-116 4-24 (103)
410 1z85_A Hypothetical protein TM 20.9 18 0.00061 30.7 -0.4 46 195-240 8-59 (234)
411 1pg6_A Hypothetical protein SP 20.6 74 0.0025 26.9 3.5 35 201-235 11-51 (243)
412 3beh_A MLL3241 protein; transm 20.4 21 0.00073 31.3 0.0 44 67-112 253-296 (355)
413 2a1x_A Phytanoyl-COA dioxygena 20.1 98 0.0034 26.3 4.3 26 218-243 216-242 (308)
No 1
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=100.00 E-value=1.4e-84 Score=580.00 Aligned_cols=258 Identities=83% Similarity=1.360 Sum_probs=251.8
Q ss_pred CcccccCCCCCCcccccCCCCceeeeeeceEEECCCCceeccCCCCCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCC
Q 025000 1 MYWKVTNPTLSPSHLQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPP 80 (259)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~tR~~~~~~~avi~pe~~v~~~lp~~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~ 80 (259)
+||||+||+++++||++++++|||+++++||+|+|+++|.+.+|+|+++++++|++|.+|+.|++++++++||++++.|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~r~~~~~~~avI~~~~iv~s~lPg~~~~~~~vL~sP~~G~~f~~~lv~l~PGg~s~~~~ 87 (266)
T 4e2q_A 8 IYWKATNPTLSPSHLQDLPGFTRSVYKRDHALITPESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSGLPP 87 (266)
T ss_dssp TTGGGTSCSSCGGGGTTSTTCCCCEECSSEEEECGGGCCCEECTTSSSEEEEEEECGGGTCSSEEEEEEECSSEECCCCC
T ss_pred cchhccCcccChhhhhcccCcccEEEEcCeEEECccceEEeeCCCCcCEEEEEEcCCCCCCcEEEEEEEECcCCcCCCCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999987788
Q ss_pred CCceEEEEEEECEEEEEEcC-CcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEeccccCCCCcceeeccCCCCCCcc
Q 025000 81 HDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENHITEQIVGSTDKQPLLE 159 (259)
Q Consensus 81 ~~~Eef~yVl~G~l~v~v~~-ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~y~p~~g~~p~~~v~~~~di~~~~ 159 (259)
|++|||+|||+|++++++ + |++++|++||++|||++.+|+++|+++|+++|++++|+|++|.+|.++++|++|+++++
T Consensus 88 h~~EEfiyVleG~l~l~l-~~g~~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V~k~y~~~~g~~p~~~v~~~~dv~~~~ 166 (266)
T 4e2q_A 88 QDIERLIFVVEGAVTLTN-TSSSSKKLTVDSYAYLPPNFHHSLDCVESATLVVFERRYEYLGSHTTELIVGSTDKQPLLE 166 (266)
T ss_dssp TTEEEEEEEEEECEEEEC---CCCEEECTTEEEEECTTCCCEEEESSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCBC
T ss_pred CCCeEEEEEEEEEEEEEE-CCCcEEEEcCCCEEEECCCCCEEEEeCCCEEEEEEEeEeeeCCCCCCceeeCcHhHCCCcc
Confidence 999999999999999999 8 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEE
Q 025000 160 TPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYA 239 (259)
Q Consensus 160 ~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~ 239 (259)
++|+++++|+|+|++++++|+||+|||+||+++|+||||+|||++|||+|+|+|++||+|++|++||+|||+|||+|||+
T Consensus 167 ~~g~~~~~r~l~p~~~~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~~~~V~~GD~i~~~~~~~h~~~ 246 (266)
T 4e2q_A 167 TPGEVFELRKLLPMSVAYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQWYA 246 (266)
T ss_dssp CTTCCSEEEESSCCSTTCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEE
T ss_pred cCCCcEEEEEccCcccccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCEEEEecCCCEEEECCCCcEEEE
Confidence 99877789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccEEEEEEeecCCCCC
Q 025000 240 ALGKTRTRYLLYKDVNRNPL 259 (259)
Q Consensus 240 n~G~e~~~fi~~k~~nr~~~ 259 (259)
|+|++||+||+|||||||||
T Consensus 247 n~G~e~~~yl~ykd~nr~~~ 266 (266)
T 4e2q_A 247 ALGKTRSRYLLYKDVNRNPL 266 (266)
T ss_dssp EESSSCEEEEEEEECSSCCC
T ss_pred eCCCCCEEEEEEccccCCCC
Confidence 99999999999999999997
No 2
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=100.00 E-value=2.2e-61 Score=426.75 Aligned_cols=241 Identities=40% Similarity=0.736 Sum_probs=229.2
Q ss_pred ccCCCCceeeeeeceEEECCCCceeccCCCCCcceEEEEecC--CCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECE
Q 025000 16 QDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITP--AMGSHFVMYLANMQENARSALPPHDVERFIFVVQGS 93 (259)
Q Consensus 16 ~~~~~~tR~~~~~~~avi~pe~~v~~~lp~~~~~~~~~l~sp--~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~ 93 (259)
+++++.+||+++++++++++++.+.+.+|.|++++.++|++| ..++.|++++++++||+....|. +|||+|||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~Pg~~~~~~~--~ee~~~Vl~G~ 78 (246)
T 1sfn_A 1 MKHLGQTRSALHGSHAVITPETFVRTALAEWPGSAIVLHIAPVVGLGARFVQFTAEMPAGAQATESV--YQRFAFVLSGE 78 (246)
T ss_dssp CGGGTCCSCEEETTEEEECGGGCCCBCCTTSTTCEEEEEECTTSTTCCSSEEEEEEECTTCEEECCS--SEEEEEEEEEE
T ss_pred CCcccCccEEeecCeEEECchhcEEecCCCccCCEEEEEecCCCCCCCcEEEEEEEECCCCcCCCCc--eeEEEEEEECE
Confidence 478999999999999999999999999999999999999999 77889999999999998876654 89999999999
Q ss_pred EEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEeccccCCC-CcceeeccCCCCCCcccCC-ceEEEEEee
Q 025000 94 AMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENH-ITEQIVGSTDKQPLLETPG-EVFQLRKLL 171 (259)
Q Consensus 94 l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~y~p~~g~-~p~~~v~~~~di~~~~~~g-~~~~~~~l~ 171 (259)
+++++ +|+++.|++||++|||++.+|+++|.++++++|+.++|+|++|. +|.+++++++|++..++.| .++.+|+|+
T Consensus 79 ~~~~~-~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l~v~~~y~~~~g~~~p~~~vg~~~dv~~~~~~~~~g~~~r~l~ 157 (246)
T 1sfn_A 79 VDVAV-GGETRTLREYDYVYLPAGEKHMLTAKTDARVSVFEKPYQTVEGVQAPGVYWGNERENPGYPFEGDDHLIARKLL 157 (246)
T ss_dssp EEEEC-SSCEEEECTTEEEEECTTCCCEEEEEEEEEEEEEEECCCCBTTBCCCCCEEEETTTCCCEETTSCTTEEEEECS
T ss_pred EEEEE-CCEEEEECCCCEEEECCCCCEEEEeCCCEEEEEEEeeeccCCCCcCCceeeccHhhCCccccCCCCCeEEEEeC
Confidence 99999 99999999999999999999999998889999999999999997 8999999999999999976 557888899
Q ss_pred CCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 172 PQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 172 p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
|++.++++.|++++|+||++++++++|.+||.+|||+|+++|++||+|++|++||++|++++++|+|+|+|+++++||+|
T Consensus 158 p~~~~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~ 237 (246)
T 1sfn_A 158 PDEPAFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLLY 237 (246)
T ss_dssp CCCTTCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEEE
T ss_pred CCccCCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEEE
Confidence 98788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCC
Q 025000 252 KDVNRNPL 259 (259)
Q Consensus 252 k~~nr~~~ 259 (259)
|||||||+
T Consensus 238 kd~~r~~~ 245 (246)
T 1sfn_A 238 KDMNRHPL 245 (246)
T ss_dssp EECSSCCC
T ss_pred EecccCCC
Confidence 99999996
No 3
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=100.00 E-value=8.4e-60 Score=423.91 Aligned_cols=241 Identities=29% Similarity=0.518 Sum_probs=224.7
Q ss_pred cCCCCceeeeeeceEEECC---CCceeccCCCCCcceEEEEecC--CCCCcEEEEEEEecCCCcC--CCCCCCceEEEEE
Q 025000 17 DLPGFTRSVYKRDHALITP---ESHVLSPLPEWTNTLGAYLITP--AMGSHFVMYLANMQENARS--ALPPHDVERFIFV 89 (259)
Q Consensus 17 ~~~~~tR~~~~~~~avi~p---e~~v~~~lp~~~~~~~~~l~sp--~~g~~f~~~~~~l~Pg~~~--~~h~~~~Eef~yV 89 (259)
.+++. |++.+++|+++++ ++.+.+.+|.|++++.++|++| ..++.|++++++++||+.. +.|.|..||++||
T Consensus 18 ~~~~~-~~~~~~~~avi~~~~~~~iv~~~lp~~~~~~~~~L~~p~~~~~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~V 96 (278)
T 1sq4_A 18 ELLTD-RAMFTEAYAVIPKGVMRDIVTSHLPFWDNMRMWVIARPLSGFAETFSQYIVELAPNGGSDKPEQDPNAEAVLFV 96 (278)
T ss_dssp -CCCC-CCEECSSEEEECGGGCCGGGCBCCTTCEEEEEEEECCCSSSSCCSCEEEEEEEEEEEEESSCCCCTTEEEEEEE
T ss_pred ccccc-ceEeccceEEECCCCcccceeccCCCccCcEEEEEecCCCCCCCcEEEEEEEECCCCccCCCCcCCCceEEEEE
Confidence 45666 9999999999999 9999999999999999999999 4578999999999999876 3456889999999
Q ss_pred EECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEeccccCCC-CcceeeccCCCCCCcccCC-ceE
Q 025000 90 VQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASLENH-ITEQIVGSTDKQPLLETPG-EVF 165 (259)
Q Consensus 90 l~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~y~p~~g~-~p~~~v~~~~di~~~~~~g-~~~ 165 (259)
|+|++++++ +|+++.|++||+++||++.+|+++| +++++++|+.++|.+.+|. .|..++++++|++..++++ .++
T Consensus 97 l~G~l~v~v-~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~~~y~~~~g~~~p~~~vgn~~di~~~~~~~~~~~ 175 (278)
T 1sq4_A 97 VEGELSLTL-QGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRKHYQKVDGVPLPEAFVTNEQDIQPLVMPDTEGR 175 (278)
T ss_dssp EESCEEEEE-SSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEEECCCCTTCCCCCCEEEEGGGSCCEECSSGGGC
T ss_pred EeCEEEEEE-CCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEEeccccCCCCcCCcccccchhhcCcccCCCCCCc
Confidence 999999999 9999999999999999999999999 5689999999999999997 7999999999999999976 444
Q ss_pred --EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 166 --QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 166 --~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
++|+|+|++.++++.|++++|+||+++|++|+|.+||.+|||+|+|+|++||+|++|++||++||++||+|+|+|+|+
T Consensus 176 ~~~~r~l~p~~~~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 176 WSTTRFVDMSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEECSSCTTCTTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred eeEEEEecCCCcCCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 677888988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEeecCCCCC
Q 025000 244 TRTRYLLYKDVNRNPL 259 (259)
Q Consensus 244 e~~~fi~~k~~nr~~~ 259 (259)
++++||+||||||||+
T Consensus 256 ~~~~yl~~~d~nr~~~ 271 (278)
T 1sq4_A 256 GRFRYLLYKDVNRHMR 271 (278)
T ss_dssp SCEEEEEEEECSSCCC
T ss_pred CCEEEEEEEEcCCCcc
Confidence 9999999999999985
No 4
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=100.00 E-value=1.3e-53 Score=379.42 Aligned_cols=248 Identities=28% Similarity=0.516 Sum_probs=221.8
Q ss_pred CCcccccCCCCceeeeeeceEEECCCCceeccCCCCCcceEEEEecCCCCCcEEEEEEEecCCCcCCCC--CCCceEEEE
Q 025000 11 SPSHLQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALP--PHDVERFIF 88 (259)
Q Consensus 11 ~~~~~~~~~~~tR~~~~~~~avi~pe~~v~~~lp~~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h--~~~~Eef~y 88 (259)
.+.++..+++.+||+++.+++++++++.+...+|.|++++.++|++|..++.|++++++++||+....+ +++.|||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~ 86 (261)
T 1rc6_A 7 VTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLY 86 (261)
T ss_dssp --CBHHHHTCCCCEECTTSEEEECGGGSCCBCCTTEEEEEEEECCCGGGTCSSEEEEEEEEEEEEESSCSCCTTEEEEEE
T ss_pred CcCccccccccceEEeECCEEEEChhhcEEeeccCCCCcEEEEEeCCCCCCcEEEEEEEEcCCCccCCCCCCCCceEEEE
Confidence 678888999999999999999999999998889999999999999998888999999999999877543 356899999
Q ss_pred EEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEeccccCCCCcceeeccCCCCCCcccCC-ceE
Q 025000 89 VVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPG-EVF 165 (259)
Q Consensus 89 Vl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~y~p~~g~~p~~~v~~~~di~~~~~~g-~~~ 165 (259)
||+|++++++ +|+++.|++||++|||++.+|+++| +++++++|+.++|++.+|..|..++.+.+|+++...+| +++
T Consensus 87 Vl~G~l~~~~-~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~~~~~~~~g~~p~~~v~~~~~~~~~~~~~~~~~ 165 (261)
T 1rc6_A 87 VISGNITAKA-EGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDV 165 (261)
T ss_dssp EEESEEEEEE-TTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCC-------C
T ss_pred EEEeEEEEEE-CCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEeccccCCCCCCceEEcCHHHCCcccCCCCcce
Confidence 9999999999 9999999999999999999999999 56899999999999999988999999999999988865 666
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC-c
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK-T 244 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e 244 (259)
..+.|++.+.+..+.+.+++++||+.++.|.||..+|.+|||+|++.+.+||+++++++||++|++++++|+++|.|+ +
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~ 245 (261)
T 1rc6_A 166 ILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGE 245 (261)
T ss_dssp EEEECSCCSTTCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSCEEEEETTCEEEECSSEEEEEEEC----
T ss_pred EEEEecCcccCCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCc
Confidence 778888877677888999999999999987777788999999999999999999999999999999999999999999 9
Q ss_pred cEEEEEEeecCCCCC
Q 025000 245 RTRYLLYKDVNRNPL 259 (259)
Q Consensus 245 ~~~fi~~k~~nr~~~ 259 (259)
+++||+||||||||+
T Consensus 246 ~~~~l~~~d~~r~~~ 260 (261)
T 1rc6_A 246 AFSYIYSKDCNRDVE 260 (261)
T ss_dssp CEEEEEEEECSCCCC
T ss_pred CEEEEEEecCCCCCC
Confidence 999999999999985
No 5
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=100.00 E-value=1.8e-50 Score=361.86 Aligned_cols=248 Identities=29% Similarity=0.560 Sum_probs=224.8
Q ss_pred CCcccccCCCCceeeeeeceEEECCCCceeccCCCCCcceEEEEecCCCCCcEEEEEEEecCCCcCCCC--CCCceEEEE
Q 025000 11 SPSHLQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALP--PHDVERFIF 88 (259)
Q Consensus 11 ~~~~~~~~~~~tR~~~~~~~avi~pe~~v~~~lp~~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h--~~~~Eef~y 88 (259)
.+.+..++++.+||+++.+++++++++.+...+|.|++++.++|++|..++.|++++++++||+....+ +++.|||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~ 89 (274)
T 1sef_A 10 RVGYQKELLTSRAVIKKDNYAIIPHDGLVQNAVPGFENVDISILGSPKLGATFVDYIATFHKNGQQTTGFGGDGIQTLVY 89 (274)
T ss_dssp -----CCCCCCCCEEETTTEEEECGGGCCCCCCTTEEEEEEEECSCGGGTCSSEEEEEEEEEEEEECSCSSBTTEEEEEE
T ss_pred CCCCCcccccccceEeEcCEEEEChhhcccccCCCCCCeEEEEEcCCCCCCcEEEEEEEECCCCcCCCCCCCCCceEEEE
Confidence 455667899999999999999999999998899999999999999998889999999999999877543 357899999
Q ss_pred EEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEeccccCCCCcceeeccCCCCCCcccCC-ceE
Q 025000 89 VVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPG-EVF 165 (259)
Q Consensus 89 Vl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~y~p~~g~~p~~~v~~~~di~~~~~~g-~~~ 165 (259)
||+|++++++ +|+++.|++||++|||++.+|+++| +++++++|+.++|+|.+|..|.+++.+++|+++..+.+ .++
T Consensus 90 Vl~G~l~~~~-~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~~y~~~~g~~p~~~v~~~~d~~~~~~~~~~g~ 168 (274)
T 1sef_A 90 VIDGRLRVSD-GQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLYKKRYQPLAGHQPYKVVGSIHDQQPEEYEGMTDV 168 (274)
T ss_dssp EEESEEEEEC-SSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCEEGGGCTTE
T ss_pred EEEeEEEEEE-CCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEeeeeeCCCCCCcceeCChHHCCccccCCCCCe
Confidence 9999999999 9999999999999999999999999 56899999999999999988999999999999998753 556
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC-c
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK-T 244 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e 244 (259)
..++|++.+.+.++.+.+++++||+.++..|.|..+|.+|||+|++.+.+||+++++++||+++++++++|+++|.|+ +
T Consensus 169 ~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~ 248 (274)
T 1sef_A 169 LLWSLLPKEFDFDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGREE 248 (274)
T ss_dssp EEEECSCSSTTCSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEECSSS
T ss_pred EEEEeCCcccCCCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCC
Confidence 778888877777899999999999999874677889999999999999999999999999999999999999999999 9
Q ss_pred cEEEEEEeecCCCCC
Q 025000 245 RTRYLLYKDVNRNPL 259 (259)
Q Consensus 245 ~~~fi~~k~~nr~~~ 259 (259)
+++||+|||+|||++
T Consensus 249 ~~~~l~~~~~~r~~~ 263 (274)
T 1sef_A 249 PLMYVYSKDANREPE 263 (274)
T ss_dssp CEEEEEEEECSSCCC
T ss_pred CEEEEEEEcCCCCcc
Confidence 999999999999963
No 6
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.97 E-value=6.8e-29 Score=216.12 Aligned_cols=181 Identities=14% Similarity=0.204 Sum_probs=146.1
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEecc--
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYA-- 138 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~y~-- 138 (259)
..+.+.++.++||+..+.|.|..++++||++|++++++ +|+++.|++||++++|+|++|.++|.++++++++..++.
T Consensus 35 ~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i-~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~~~~ 113 (227)
T 3rns_A 35 PNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI-ENNKKTISNGDFLEITANHNYSIEARDNLKLIEIGEKIGDG 113 (227)
T ss_dssp SSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE-SSCEEEEETTEEEEECSSCCEEEEESSSEEEEEEEECC---
T ss_pred CCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCCEEEEECCCcEEEEEEeecccc
Confidence 36788899999999888898899999999999999999 999999999999999999999999988899999977654
Q ss_pred c-----cCCCCcceeeccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEE
Q 025000 139 S-----LENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY 213 (259)
Q Consensus 139 p-----~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~ 213 (259)
. ..+. +...+.+..|. .++..+++..+.|...+ .+.+.+++|+||..++. |+|..++.+|||+|++.+
T Consensus 114 ~~~~~~~~~l-~~~~~~~~~d~--~~~~~g~~~~~~l~~~~---~~~~~~~~~~~G~~~~~-H~H~~~e~~~Vl~G~~~~ 186 (227)
T 3rns_A 114 NMENKTLKML-ESASAFNLAEV--VEYQEGKIVSKNLVAKP---NLVMTIMSFWKGESLDP-HKAPGDALVTVLDGEGKY 186 (227)
T ss_dssp --------------CCEESGGG--SCCCTTCEEEEEEEEET---TEEEEEEEECTTCEEEE-ECCSSEEEEEEEEEEEEE
T ss_pred hhhhhHhhcC-CccccCcHHHc--cccCCCCEEEEEEEECC---CeEEEEEEECCCCccCC-EECCCcEEEEEEeEEEEE
Confidence 1 1121 22333344442 23333455666666432 47788999999999986 778888999999999999
Q ss_pred EeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 214 RLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 214 ~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+||+++.+++||++|++++++|++.|. .+++++|+
T Consensus 187 ~i~g~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 187 YVDGKPFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp EETTEEEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred EECCEEEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 9999999999999999999999999994 56677765
No 7
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.96 E-value=9.3e-28 Score=210.82 Aligned_cols=191 Identities=14% Similarity=0.137 Sum_probs=144.3
Q ss_pred CcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEE-eCCCCcEEEEe-
Q 025000 47 TNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTY-LPPNFAHSLRA- 124 (259)
Q Consensus 47 ~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~-~p~~~~H~~~N- 124 (259)
.++...++... ...+.+.+++||+..+.|.|..+|++||++|++++++ +|+++.|++||++| +|+|++|+++|
T Consensus 22 ~Gv~~~~l~~~----~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~-~~~~~~l~~Gd~i~~ip~~~~H~~~n~ 96 (243)
T 3h7j_A 22 NGVRQYSTVRG----DTEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV-GDVTRKMTALESAYIAPPHVPHGARND 96 (243)
T ss_dssp TSCEEEEEEET----TEEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE-TTEEEEEETTTCEEEECTTCCEEEEEC
T ss_pred CCeEEEEEECC----CCEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE-CCEEEEECCCCEEEEcCCCCcEeeEeC
Confidence 45565666543 2356677799999888888889999999999999999 99999999999997 99999999999
Q ss_pred -CCeEEEEEEEEeccccCCC-Ccceee-ccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecC-CcccCcceeecc
Q 025000 125 -EGSATLVVFERRYASLENH-ITEQIV-GSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQP-GDFLNVKEVHYN 200 (259)
Q Consensus 125 -~~~a~~l~v~~~y~p~~g~-~p~~~v-~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~P-G~~~~~~~~H~~ 200 (259)
+++++++++. ++...++. .|..+. .....-. ...+ +....+ .+..+.+.+++|+| |+.++. |.|.+
T Consensus 97 ~~~~~~~l~i~-r~~~~e~~~~p~g~~~~~L~~~~--~~~~--~~~~~~----~~~~~~~~~~~~~p~g~~~~~-H~H~~ 166 (243)
T 3h7j_A 97 TDQEVIAIDIK-RLKADETYTSPEDYFLDIFKTRD--LLPG--MEVTFF----VEDWVEIMLAKIPGNGGEMPF-HKHRN 166 (243)
T ss_dssp SSSCEEEEEEE-ECCTTCCCCCCTTSEECCEECSC--SBTT--BCEEEE----EETTEEEEEEEECTTTEEEEE-ECCSS
T ss_pred CCCcEEEEEEe-ccCccccCCCchhhhhhhccCcc--cccC--cceeee----ccceeEEEEEEECCCCCcCCC-EeCCC
Confidence 5579998885 55433321 122211 1110000 0000 000000 12235667889999 888886 78889
Q ss_pred ceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 201 QHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 201 eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
+|.+|||+|++.+.+||+++.+++||++|++++++|++.|.|++++++|..-
T Consensus 167 ~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 167 EQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp EEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred cEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999999999999988653
No 8
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.95 E-value=1.6e-26 Score=210.05 Aligned_cols=201 Identities=19% Similarity=0.186 Sum_probs=148.1
Q ss_pred CcceEEEEecCC-CCCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe
Q 025000 47 TNTLGAYLITPA-MGSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA 124 (259)
Q Consensus 47 ~~~~~~~l~sp~-~g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N 124 (259)
.+...++|+++. .+..|.++++++.||+..+.|.|. .+|++||++|++++++ +|+++.|++||+++||++++|+++|
T Consensus 29 ~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-~~~~~~l~~Gd~~~~p~~~~H~~~n 107 (337)
T 1y3t_A 29 GRQVATVMANGRSTGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL-DGERYLLISGDYANIPAGTPHSYRM 107 (337)
T ss_dssp TTEEEEEEECHHHHTSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTCCEEEEE
T ss_pred CCeEEEEEeecCCCCCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE-CCEEEEECCCCEEEECCCCcEEEEE
Confidence 456778888776 477999999999999887777666 8999999999999999 9999999999999999999999999
Q ss_pred -CCeEEEEEEEEec----------cccCCC-Ccc---------ee----------ecc------------CCCCCCcc--
Q 025000 125 -EGSATLVVFERRY----------ASLENH-ITE---------QI----------VGS------------TDKQPLLE-- 159 (259)
Q Consensus 125 -~~~a~~l~v~~~y----------~p~~g~-~p~---------~~----------v~~------------~~di~~~~-- 159 (259)
..+++++++..+- .+..+. .|. .+ +.. ...++...
T Consensus 108 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~a~~~gv~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (337)
T 1y3t_A 108 QSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNERFAEAAAVATIVFLDEAKPACSAKLAELTELPDGAVP 187 (337)
T ss_dssp CSTTEEEEEEEETTSSTHHHHHHSEECSCSSCCSSCCCCCTTCTTGGGTSSCEECCCCCCCSSCSCEECCBCSCCSSSCC
T ss_pred CCCCeEEEEEECCCCHHHHHHHhCcccccccCCCCCCcccCHHHHHHhHhhccEEEcCCCCccccccchhhhcCCCCCCC
Confidence 3368998884432 111111 110 00 000 00111110
Q ss_pred --c---CC-----ceEEEEEeeCCC-CCcceEEEEEEecC-CcccCcceeec-cceEEEEEEceEEEEeCCEEEEccCCc
Q 025000 160 --T---PG-----EVFQLRKLLPQA-VPFDFNIHIMDFQP-GDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGD 226 (259)
Q Consensus 160 --~---~g-----~~~~~~~l~p~~-~~~~~~~~~~t~~P-G~~~~~~~~H~-~eh~~~il~G~g~~~~~g~~~~v~~GD 226 (259)
+ ++ ++...+.|.+.. .+..+ +...++.| |...+. |.|. .+|.+|||+|++.+.++|+++.+++||
T Consensus 188 ~v~r~~~~~~~~~~g~~~~~l~~~~~~~~~~-~~~~~~~p~g~~~~~-h~H~~~~e~~~vl~G~~~~~i~~~~~~l~~GD 265 (337)
T 1y3t_A 188 YVLESGEGDRLLTGDQLHRIVAAQKNTDGQF-IVVSSEGPKGDRIVD-HYHEYHTETFYCLEGQMTMWTDGQEIQLNPGD 265 (337)
T ss_dssp EEECTTCSEEEEETTEEEEEEECGGGTTTSC-EEEEEEECSCCCCCC-EECSSCEEEEEEEESCEEEEETTEEEEECTTC
T ss_pred EEECCCCcCEEEECCcEEEEEecccccCCcE-EEEEEEcCCCCCCCC-cCCCCCcEEEEEEeCEEEEEECCEEEEECCCC
Confidence 0 00 223456666433 33333 44556767 556665 6776 689999999999999999999999999
Q ss_pred EEEeCCCCceeEEeCCCccEEEEEE
Q 025000 227 VLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 227 ~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+++++++++|++.|.|+ +++||+.
T Consensus 266 ~~~ip~~~~H~~~n~~~-~~~~l~v 289 (337)
T 1y3t_A 266 FLHVPANTVHSYRLDSH-YTKMVGV 289 (337)
T ss_dssp EEEECTTCCEEEEECSS-SEEEEEE
T ss_pred EEEECCCCeEEEEECCC-CeEEEEE
Confidence 99999999999999998 8998876
No 9
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.93 E-value=2e-24 Score=198.83 Aligned_cols=204 Identities=15% Similarity=0.171 Sum_probs=150.8
Q ss_pred cceEEEEecCCC--CCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEc--CC--cEEEEeCCcEEEeCCCCcE
Q 025000 48 NTLGAYLITPAM--GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNA--SG--VSSKLMVDSYTYLPPNFAH 120 (259)
Q Consensus 48 ~~~~~~l~sp~~--g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~--~g--e~~~L~~Gd~i~~p~~~~H 120 (259)
+..++.+.++.. ...+.+.++++.||+..+.|.|. .+|++||++|++++++. +| +++.|++||+++||+|.+|
T Consensus 35 ~G~~~~~~~~~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H 114 (361)
T 2vqa_A 35 GGTTKQVGTYNFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGH 114 (361)
T ss_dssp TEEEEEESTTTCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEE
T ss_pred CceEEEeChhhCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeE
Confidence 344455555544 24688999999999877777566 89999999999999982 23 5789999999999999999
Q ss_pred EEEe--CCeEEEEEEEEeccccC---------------------------------C-CC--------cce---------
Q 025000 121 SLRA--EGSATLVVFERRYASLE---------------------------------N-HI--------TEQ--------- 147 (259)
Q Consensus 121 ~~~N--~~~a~~l~v~~~y~p~~---------------------------------g-~~--------p~~--------- 147 (259)
.++| +++++++++.....+.+ . .. |..
T Consensus 115 ~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~p~~vLa~~~~v~~~~~~~l~~~~~~i~~~~~~p~~~~~~~~~~~ 194 (361)
T 2vqa_A 115 SIEGIGPDTAKFLLVFNDGTFSEGATFSVTDWLSHTPIAWVEENLGWTAAQVAQLPKKQVYISSYGPASGPLASATPQGQ 194 (361)
T ss_dssp EEEECSSSCEEEEEEESSTTCCTTSSEEHHHHHHTSCHHHHHHHHTCCHHHHTTSCSSCCCEECSSCCCCCGGGCCCSSC
T ss_pred EEEeCCCCCEEEEEEECCCCccccceecHhHHHHhCCHHHHHHHhCcCHHHHHhccccCceEEeCCCCCCccccccccCc
Confidence 9999 35899998866653321 0 00 000
Q ss_pred -------eeccCCCCCCc-ccCCceEEEEEeeCCCC-C-cceEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEe-
Q 025000 148 -------IVGSTDKQPLL-ETPGEVFQLRKLLPQAV-P-FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRL- 215 (259)
Q Consensus 148 -------~v~~~~di~~~-~~~g~~~~~~~l~p~~~-~-~~~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~- 215 (259)
++.+..+.+.. ...|+ .++.+++.+. . ..+.+.+++++||+.++. |.|.. +|.+|||+|++.+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gg--~~~~~~~~~~~~~~~~~~~~~~l~pg~~~~~-H~H~~~~E~~~Vl~G~~~~~v~ 271 (361)
T 2vqa_A 195 TAKIEVPHTHNLLGQQPLVSLGGN--ELRLASAKEFPGSFNMTGALIHLEPGAMRQL-HWHPNADEWQYVLDGEMDLTVF 271 (361)
T ss_dssp CCBCCSCCEEECTTSCCSEEETTE--EEEEECTTTCTTSTTCEEEEEEECTTCEEEE-EECSSCCEEEEEEESCEEEEEE
T ss_pred CCCCCcceEeccccCCCcccCCCc--eEEEEehhhCcCcccceEEEEEECCCccccc-ccCCCCCEEEEEEeCEEEEEEE
Confidence 00001111111 01222 3445554332 2 368888999999999987 66665 899999999999999
Q ss_pred --CCE--EEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeec
Q 025000 216 --GDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 254 (259)
Q Consensus 216 --~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~ 254 (259)
||+ ++.+++||+++++++++|++.|.|+++++||+...-
T Consensus 272 ~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 272 ASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp CSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred cCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 898 999999999999999999999999999999998753
No 10
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.93 E-value=1.7e-24 Score=201.13 Aligned_cols=202 Identities=15% Similarity=0.181 Sum_probs=149.5
Q ss_pred ceEEEEecCCC--CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEc--CCc--EEEEeCCcEEEeCCCCcEEE
Q 025000 49 TLGAYLITPAM--GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA--SGV--SSKLMVDSYTYLPPNFAHSL 122 (259)
Q Consensus 49 ~~~~~l~sp~~--g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~--~ge--~~~L~~Gd~i~~p~~~~H~~ 122 (259)
..++.+.+... ...+.+.++++.||+..+.|.|..+|++||++|++++++. +|+ ++.|++||+++||+|..|.+
T Consensus 63 G~~~~~~~~~lp~~~~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~ 142 (385)
T 1j58_A 63 GYAREVTVRELPISENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSI 142 (385)
T ss_dssp EEEEEECTTTCTTCSSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEE
T ss_pred cEEEEeccccCcccCceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEE
Confidence 34455554443 2479999999999997777877789999999999999982 345 67999999999999999999
Q ss_pred Ee-CCeEEEEEEEEecccc--C--------------------C-----------------------------------CC
Q 025000 123 RA-EGSATLVVFERRYASL--E--------------------N-----------------------------------HI 144 (259)
Q Consensus 123 ~N-~~~a~~l~v~~~y~p~--~--------------------g-----------------------------------~~ 144 (259)
+| ..+++++++...-... . + ..
T Consensus 143 ~n~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~evla~~~~vs~~~~~~l~~~~~~i~~~~~p~~l~~~~~~~~~~~~ 222 (385)
T 1j58_A 143 QALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEV 222 (385)
T ss_dssp EEEEEEEEEEEEESCTTCCGGGEEEHHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCC
T ss_pred EECCCCEEEEEEECCCCccccchhhhhhhhhcccHHHHHHHhCCCHHHHHhcccccceEeccCCCCccccccccCCCCCC
Confidence 99 3356776643221000 0 0 00
Q ss_pred cceeeccCCCCCCcccCCceEEEEEeeCCCCC--cceEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeC-----
Q 025000 145 TEQIVGSTDKQPLLETPGEVFQLRKLLPQAVP--FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLG----- 216 (259)
Q Consensus 145 p~~~v~~~~di~~~~~~g~~~~~~~l~p~~~~--~~~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~----- 216 (259)
|..++.++.+.+....+++ ..+.+++.+.. ..+.+..++++||+.++. |.|.. +|.+|||+|++.+.++
T Consensus 223 ~~~~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~l~pG~~~~~-h~H~~~~E~~~Vl~G~~~~~i~~~~g~ 299 (385)
T 1j58_A 223 PYPFTYRLLEQEPIESEGG--KVYIADSTNFKVSKTIASALVTVEPGAMREL-HWHPNTHEWQYYISGKARMTVFASDGH 299 (385)
T ss_dssp SSCSEEEGGGSCCEECSSE--EEEEESTTTSTTCCSCEEEEEEECTTCEEEE-EECSSSCEEEEEEESEEEEEEEEETTE
T ss_pred CCCeeeecccCCCeeCCCc--eEEEeecccCCcccceEEEEEEECCCcccCc-eeCCCCCEEEEEEeCeEEEEEEcCCCc
Confidence 1112222223222222333 34566665443 478899999999999987 66666 8999999999999998
Q ss_pred CEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 217 DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 217 g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
++++.+++||+++++++++|++.|.|+++++||+.-.
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~ 336 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFK 336 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEES
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEEC
Confidence 8999999999999999999999999999999998743
No 11
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.93 E-value=4.6e-24 Score=199.44 Aligned_cols=202 Identities=15% Similarity=0.181 Sum_probs=149.6
Q ss_pred eEEEEecCC------CCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEE-EEcCCcEEEEeCCcEEEeCCCCcEEE
Q 025000 50 LGAYLITPA------MGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAML-TNASGVSSKLMVDSYTYLPPNFAHSL 122 (259)
Q Consensus 50 ~~~~l~sp~------~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v-~v~~ge~~~L~~Gd~i~~p~~~~H~~ 122 (259)
++..|..|. .+..+.+.+.+|.||+..+.|.|..+|++|||+|+..+ .+ +|+++.+++||++++|+|..|..
T Consensus 104 R~~~L~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v-~G~~~~~~~GD~i~~P~g~~H~~ 182 (394)
T 3bu7_A 104 RVVYLRNPQRKDVSAACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIV-DGHKVELGANDFVLTPNGTWHEH 182 (394)
T ss_dssp CCEECCCGGGGGGTCSBTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEE-TTEEEEECTTCEEEECTTCCEEE
T ss_pred EEEEEeCCcccCcCccCCeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEE-CCEEEEEcCCCEEEECcCCCEEE
Confidence 444555554 24579999999999999999987778999999999976 77 99999999999999999999999
Q ss_pred Ee-CCeEEEEEEEEecccc----C---------CCCc----c----------ee---------------eccCCCCCC--
Q 025000 123 RA-EGSATLVVFERRYASL----E---------NHIT----E----------QI---------------VGSTDKQPL-- 157 (259)
Q Consensus 123 ~N-~~~a~~l~v~~~y~p~----~---------g~~p----~----------~~---------------v~~~~di~~-- 157 (259)
.| +++..+.|+.-...|+ + ...| . .+ .-.|+++..
T Consensus 183 ~N~~gde~l~~l~v~d~Pl~~~l~~~f~e~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~sP~~~y~w~~~~~~L 262 (394)
T 3bu7_A 183 GILESGTECIWQDGLDIPLTNCLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEAL 262 (394)
T ss_dssp EECTTCCCEEEEEEECHHHHHHTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHH
T ss_pred EcCCCCCCEEEEEcccchhhhhcCccccccCcccccCccCCccchhhhhcCcccccccccccCCCCCcEEecHHHHHHHH
Confidence 99 7654444442111110 0 0011 1 00 011111100
Q ss_pred ------cccCC-ceEEEEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcE
Q 025000 158 ------LETPG-EVFQLRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDV 227 (259)
Q Consensus 158 ------~~~~g-~~~~~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~ 227 (259)
..-++ +++.+..+-|...+ ..+.+.+.+|+||+.++. |.|.+++.+|||+|+|.+.+||+.+++++||+
T Consensus 263 ~~~~~~~~~~~~~~~~l~l~nP~~g~~~~~tl~~~~~~l~PG~~~~~-HrH~~~~v~~VleG~G~~~V~ge~~~~~~GD~ 341 (394)
T 3bu7_A 263 LNYAKASDGSPYDGLILRYTNPQTGGHPMLTMGASMQMLRPGEHTKA-HRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDI 341 (394)
T ss_dssp HHHHTTCCCBTTTBEEEEECCTTTSSCSSSSCEEEEEEECTTCBCCC-EEESSCEEEEEEECCEEEEETTEEEEECTTCE
T ss_pred HHhhhccCcCcCCceEEEEeCCCCCCCCCCeeeEEEEEECCCCcCCC-cccCCcEEEEEEeCeEEEEECCEEEEEeCCCE
Confidence 00011 33333333465432 467889999999999997 67778899999999999999999999999999
Q ss_pred EEeCCCCceeEEeCC-CccEEEEEEee
Q 025000 228 LWMAPFVPQWYAALG-KTRTRYLLYKD 253 (259)
Q Consensus 228 i~~~~~~~H~~~n~G-~e~~~fi~~k~ 253 (259)
++++++.+|++.|+| ++++.+|++.|
T Consensus 342 ~~iP~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 342 FCVPAWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp EEECTTCCEEEEECCSSCCEEEEEEES
T ss_pred EEECCCCeEEeEeCCCCCCeEEEEeeC
Confidence 999999999999999 89999999976
No 12
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.91 E-value=7.1e-23 Score=189.38 Aligned_cols=189 Identities=11% Similarity=0.100 Sum_probs=142.9
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEE-EEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEec
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAML-TNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRY 137 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v-~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~y 137 (259)
..+.+.+++++||+..+.|.|..+|++||++|++++ .+ +|+++.|++||++++|++.+|.++| +++++++++...-
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v-~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~p 176 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAV-DGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDLP 176 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEE-TTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECHH
T ss_pred CcEEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEE-CCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECch
Confidence 368899999999998888878889999999999999 88 9999999999999999999999999 4578888774321
Q ss_pred ----------cccCCC-Cc----c-----------------------eeeccCCCCC---------CcccCCceEEEEEe
Q 025000 138 ----------ASLENH-IT----E-----------------------QIVGSTDKQP---------LLETPGEVFQLRKL 170 (259)
Q Consensus 138 ----------~p~~g~-~p----~-----------------------~~v~~~~di~---------~~~~~g~~~~~~~l 170 (259)
+..+.. .| . .+.-.|.+.. ..+..-.+...+.+
T Consensus 177 ~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~sp~~~y~~~~~~~~l~~~~~~~~~~~~~G~~~~~~ 256 (354)
T 2d40_A 177 LVNILGCGFAEDYPEEQQPVTRKEGDYLPRYAANMLPLRHQTGNSSPIFNYRYDRSREVLHDLTRLGDADEWDGYKMRYV 256 (354)
T ss_dssp HHHHHTCCCEEECC--CCCCCSCTTTHHHHHSSSEECSSCCCCSSCSCCEECHHHHHHHHHHHHTTSCCBTTTBEEEEEC
T ss_pred hHhhcCceeeecCccccCcCcCCcchhhhhhccCCCCccccccCCCcceeccHHHHHHHHHhhhhccccCCCCCeEEEEe
Confidence 000000 00 0 0000111100 00000122344445
Q ss_pred eCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEE
Q 025000 171 LPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTR 247 (259)
Q Consensus 171 ~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 247 (259)
.|...+ ..+.+....|+||+..+. |.|..++.+||++|+|.+++||+.+++++||++++|++++|++.|+ +++.
T Consensus 257 np~t~~~~~~ti~~~~~~l~pG~~~~~-H~h~~~ev~~v~~G~g~~~v~~~~~~~~~GD~~~vP~~~~H~~~n~--e~~~ 333 (354)
T 2d40_A 257 NPVTGGYPMPSMGAFLQLLPKGFASRV-ARTTDSTIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQTT--QDSV 333 (354)
T ss_dssp CTTTSSCSSSSCEEEEEEECTTCBCCC-BEESSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEEE--EEEE
T ss_pred CCCcCCCCCCcceeEEEEECCCCCCCc-eecCCcEEEEEEeCeEEEEECCEEEEEcCCCEEEECCCCeEEEEeC--CCEE
Confidence 565332 367788899999999987 7788889999999999999999999999999999999999999994 8899
Q ss_pred EEEEee
Q 025000 248 YLLYKD 253 (259)
Q Consensus 248 fi~~k~ 253 (259)
+|++-|
T Consensus 334 l~~~~d 339 (354)
T 2d40_A 334 LFSFSD 339 (354)
T ss_dssp EEEEES
T ss_pred EEEEcC
Confidence 999865
No 13
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.90 E-value=2.1e-22 Score=185.91 Aligned_cols=199 Identities=13% Similarity=0.139 Sum_probs=141.5
Q ss_pred ceEEEEecCC-CCCcEEEEEEEecCCCcCC---CCCCC-ceEEEEEEECEEEEEEcCC-----cEEEEeCCcEEEeCCCC
Q 025000 49 TLGAYLITPA-MGSHFVMYLANMQENARSA---LPPHD-VERFIFVVQGSAMLTNASG-----VSSKLMVDSYTYLPPNF 118 (259)
Q Consensus 49 ~~~~~l~sp~-~g~~f~~~~~~l~Pg~~~~---~h~~~-~Eef~yVl~G~l~v~v~~g-----e~~~L~~Gd~i~~p~~~ 118 (259)
..+++++++. .+..|.++ .++.|++... .|.|. .+|++|||+|++++++ ++ +++.|++||+++||++.
T Consensus 33 ~~~~~l~~~~~~~~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v-~~~~g~~~~~~L~~GD~v~ip~g~ 110 (350)
T 1juh_A 33 QLYRFYVTGPSSGYAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWA-QSGNETQQTRVLSSGDYGSVPRNV 110 (350)
T ss_dssp EEEEEEECHHHHTTSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEE-EETTSCCEEEEEETTCEEEECTTE
T ss_pred ceEEEEecCCCCCCcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEE-CCcCCceEEEEECCCCEEEECCCC
Confidence 3456666654 46678888 5666776554 67554 8999999999999999 88 89999999999999999
Q ss_pred cEEEEe-CCeEEEEEEEEecc----------ccC----C-CCc------------ceeec--------------------
Q 025000 119 AHSLRA-EGSATLVVFERRYA----------SLE----N-HIT------------EQIVG-------------------- 150 (259)
Q Consensus 119 ~H~~~N-~~~a~~l~v~~~y~----------p~~----g-~~p------------~~~v~-------------------- 150 (259)
+|+++| ....+++++..+-. +.+ + ..| ..+..
T Consensus 111 ~H~~~n~~~~~~~l~v~~p~~~~~~f~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (350)
T 1juh_A 111 THTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTV 190 (350)
T ss_dssp EEEEEECSTTEEEEEEEESSCTTHHHHHHSEECCCTTCCSSCCC--------------CGGGGGGTCEECTTCCCCCCCB
T ss_pred cEEEEeCCCCCEEEEEEcCccHHHHHHHhccccccccccccCCcccccCccccCHHHHHHHHHHcCCEeccccCChhHhh
Confidence 999999 22348888754421 100 0 000 11100
Q ss_pred --------cCCCCCCc-------cc---C--C--------ceEEEEEeeC-CCCCc-ceEEEEEEecCC---cccCccee
Q 025000 151 --------STDKQPLL-------ET---P--G--------EVFQLRKLLP-QAVPF-DFNIHIMDFQPG---DFLNVKEV 197 (259)
Q Consensus 151 --------~~~di~~~-------~~---~--g--------~~~~~~~l~p-~~~~~-~~~~~~~t~~PG---~~~~~~~~ 197 (259)
.|.+-|.. ++ . | +.+.+|.|+. +.... .+.|+.++++++ +.++ +|+
T Consensus 191 ~~~a~~~~~w~~~~~~~l~~~~~p~~~~~~~g~~~~~~~~g~v~~~~l~~~~~~~~~~f~~~~i~~~~~~~g~~~~-~h~ 269 (350)
T 1juh_A 191 NGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVP-TWS 269 (350)
T ss_dssp TTEESSSSCSSSSCCCCCSSTTCCEEECTTCSCEEEECTTSCEEEEEEECHHHHGGGCEEEEEEEECCCCTTSCCC-CBC
T ss_pred ccccccCCccccCcccccCCCCCceEECCCccchhhcccCCcEEEEEEEeCCcCceeEEEEEEEeeccccCCCCCC-ccc
Confidence 11111111 11 1 1 2334666663 33343 789999999994 4676 478
Q ss_pred eccceEEEEEEceEEEEeCC-EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 198 HYNQHGLLLLEGQGIYRLGD-SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 198 H~~eh~~~il~G~g~~~~~g-~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
|.+++.+|||+|++.++++| +++.+++||+|+||+|.+|+++|.++. ..+|+.
T Consensus 270 ~~~~~~~~vleG~~~i~i~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~ 323 (350)
T 1juh_A 270 FPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFV 323 (350)
T ss_dssp CSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECTTCCEEEEESSSS-EEEEEE
T ss_pred CCCcEEEEEEeeEEEEEECCeEEEEeCCCCEEEECCCCCEEEEecCCe-EEEEEE
Confidence 89999999999999999999 999999999999999999999999765 555554
No 14
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.84 E-value=2.6e-19 Score=165.72 Aligned_cols=200 Identities=14% Similarity=0.124 Sum_probs=148.2
Q ss_pred eEEEEecCCCC------CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEE-EEEcCCcEEEEeCCcEEEeCCCCcEEE
Q 025000 50 LGAYLITPAMG------SHFVMYLANMQENARSALPPHDVERFIFVVQGSAM-LTNASGVSSKLMVDSYTYLPPNFAHSL 122 (259)
Q Consensus 50 ~~~~l~sp~~g------~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~-v~v~~ge~~~L~~Gd~i~~p~~~~H~~ 122 (259)
+..+|+.|..+ ..+.+.+.+++||+..+.|.|..++++||++|++. +.+ +|+++.+++||++++|++..|.+
T Consensus 84 r~~~l~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~v-dG~~~~~~~GD~v~iP~g~~H~~ 162 (368)
T 3nw4_A 84 RALGLANPGLGGNAYISPTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVV-NGDPVRMSRGDLLLTPGWCFHGH 162 (368)
T ss_dssp CEEECCCTTSTTCSCSSSSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEE-TTEEEEEETTCEEEECTTCCEEE
T ss_pred EEEEEeCCCCCCcCccCCceEEEEEEECCCCccCceecccceEEEEEecceEEEEE-CCEEEEEeCCCEEEECCCCcEEe
Confidence 45567777654 46999999999999999898888999999999996 888 99999999999999999999999
Q ss_pred Ee--CCeEEEEEEEE----------ecccc---------------------CCCCcceeeccC-C----CCCCcc-----
Q 025000 123 RA--EGSATLVVFER----------RYASL---------------------ENHITEQIVGST-D----KQPLLE----- 159 (259)
Q Consensus 123 ~N--~~~a~~l~v~~----------~y~p~---------------------~g~~p~~~v~~~-~----di~~~~----- 159 (259)
.| ++++.++.+.. .|+.. ++.+|......- . ..|+..
T Consensus 163 ~N~gde~l~~l~v~D~Pl~~~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~~~~~sP~~~ypw~~~~~aL 242 (368)
T 3nw4_A 163 MNDTDQPMAWIDGLDIPFSQQMDVGFFEFGSDRVTDYATPNFSRGERLWCHPGLRPLSGLQNTVASPIGAYRWEFTDRAL 242 (368)
T ss_dssp EECSSSCEEEEEEECHHHHHHHTCCCEEECCSSCSCCCCCSSCHHHHHHCSTTCCCGGGCSCCSSCSCCEECHHHHHHHH
T ss_pred EeCCCCCeEEEEecchHHHhhcCceeeecccccccccccccCCcccchhhccccccccccCCCCCCCceecCHHHHHHHH
Confidence 99 45666654320 01100 011111000000 0 011111
Q ss_pred -----c--CC-----c-eEE-EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEc
Q 025000 160 -----T--PG-----E-VFQ-LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPV 222 (259)
Q Consensus 160 -----~--~g-----~-~~~-~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v 222 (259)
+ .| . ++. ++..-|...+ ..+.+....|.||.+... |.|..+++|+|++|+|.+.+||+..++
T Consensus 243 ~~~~~l~~~~~~~~~~~g~~~~~y~NP~tg~~~~pti~~~~~~L~pG~~t~~-hRht~s~Vy~V~eG~G~~~I~~~~~~w 321 (368)
T 3nw4_A 243 TEQLLLEDEGQPATVAPGHAAIRYVNPTTGGDVMPTLRCEFHRLRAGTETAT-RNEVGSTVFQVFEGAGAVVMNGETTKL 321 (368)
T ss_dssp HHHHHHHHTTCSCSSBTTEEEEECBCTTTSSBSSSSCEEEEEEECTTCBCCC-EEESSCEEEEEEESCEEEEETTEEEEE
T ss_pred HhhhhhhhccCCCcccCceEEEEEeCCCCCCCcchhHHhheEEECCCCccCC-eeccccEEEEEEeCcEEEEECCEEEEe
Confidence 0 01 1 333 3333465443 468888999999999986 788888999999999999999999999
Q ss_pred cCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 223 QAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 223 ~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
++||++.+|++.+|++.|. +++.+|.+-|
T Consensus 322 ~~gD~fvvP~w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 322 EKGDMFVVPSWVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp CTTCEEEECTTCCEEEEES--SSEEEEEEES
T ss_pred cCCCEEEECCCCcEEEEeC--CCEEEEEEeC
Confidence 9999999999999999997 6898888876
No 15
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.77 E-value=1.1e-17 Score=159.81 Aligned_cols=73 Identities=11% Similarity=0.184 Sum_probs=65.2
Q ss_pred ceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeCC----EEEE--ccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGD----SWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~g----~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
++.+..++|+||+..+. |.|. ..|.+|||+|++.+.+.+ +.+. |++||++++|+|.+|++.| |+++++|++
T Consensus 337 ~is~~~v~l~pGa~~~p-H~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~ 414 (476)
T 1fxz_A 337 RLSAEFGSLRKNAMFVP-HYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARS-QSDNFEYVS 414 (476)
T ss_dssp TCCEEEEEECTTCEEEE-EEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSTTEEEEE
T ss_pred cceEEEEEecCCceecc-eECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEe-CCCCEEEEE
Confidence 68889999999999986 7777 458899999999998865 4444 9999999999999999999 899999999
Q ss_pred Ee
Q 025000 251 YK 252 (259)
Q Consensus 251 ~k 252 (259)
+.
T Consensus 415 f~ 416 (476)
T 1fxz_A 415 FK 416 (476)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 16
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.75 E-value=9.5e-17 Score=151.27 Aligned_cols=189 Identities=15% Similarity=0.155 Sum_probs=135.7
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEE---cCCcEEEEeCCcEEEeCCCCcEEEEeC---CeEEEEEEEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN---ASGVSSKLMVDSYTYLPPNFAHSLRAE---GSATLVVFER 135 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v---~~ge~~~L~~Gd~i~~p~~~~H~~~N~---~~a~~l~v~~ 135 (259)
++.+.+++++||+..++|++..+|++||++|++++.+ ++++++.|++||.++||+|..|.+.|. ++++++.+..
T Consensus 48 ~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~ 127 (416)
T 1uij_A 48 DYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAI 127 (416)
T ss_dssp TCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEE
T ss_pred cEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEec
Confidence 4999999999999888887789999999999999987 246789999999999999999999994 4778877754
Q ss_pred ecc-c-------cCCCC-cceeeccCC----------------CCC-C--------------------------------
Q 025000 136 RYA-S-------LENHI-TEQIVGSTD----------------KQP-L-------------------------------- 157 (259)
Q Consensus 136 ~y~-p-------~~g~~-p~~~v~~~~----------------di~-~-------------------------------- 157 (259)
+.. | +.|.. +..+.+... .++ .
T Consensus 128 ~~~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~ 207 (416)
T 1uij_A 128 PVNKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLFGEEEEQRQQEGVIVELSKEQIRQLSRRAKSSSR 207 (416)
T ss_dssp ESSBTTBCCEEESSCBSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCTTCGGGSBSSSEEECCHHHHHHHTSSCBCCCG
T ss_pred cCCCCCcceeeeecCCcccchhhhcCCHHHHHHHhCcCHHHHHhhhhccccccccCcceEEEeCCcccchhhhcccccCC
Confidence 321 0 11100 000000000 001 0
Q ss_pred -----c----------c-c--CCceEEEEEeeCCCCC----cceEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEE
Q 025000 158 -----L----------E-T--PGEVFQLRKLLPQAVP----FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYR 214 (259)
Q Consensus 158 -----~----------~-~--~g~~~~~~~l~p~~~~----~~~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~ 214 (259)
. + + .+| .+..+.+.+.- -++.+..+.|.||+..+. |.|.. .|.+||++|+|++.
T Consensus 208 ~g~~~~~~~~~l~~~~p~~~~~~G--~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~p-H~h~~A~Ei~~V~~G~~~v~ 284 (416)
T 1uij_A 208 KTISSEDEPFNLRSRNPIYSNNFG--KFFEITPEKNPQLRDLDIFLSSVDINEGALLLP-HFNSKAIVILVINEGDANIE 284 (416)
T ss_dssp GGGGCSSSCEETTSSCCSEECSSE--EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEEESEEEEE
T ss_pred CCCCCcccceeccccCCCccCCCc--eEEEEChHHCccchhcCcceEEEEEcCCcEecc-eEcCCCcEEEEEEeeEEEEE
Confidence 0 0 0 112 12333343331 247888999999999885 66664 48899999999986
Q ss_pred eCC-----------------EEE--EccCCcEEEeCCCCceeEEeCCCccEEEEEEeecC
Q 025000 215 LGD-----------------SWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 255 (259)
Q Consensus 215 ~~g-----------------~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~n 255 (259)
+-+ +.+ .|++||++++|.|.+|++.|+ ++++|+++++-.
T Consensus 285 ~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~ 342 (416)
T 1uij_A 285 LVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINA 342 (416)
T ss_dssp EEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETC
T ss_pred EEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCC
Confidence 653 256 999999999999999999999 689999998644
No 17
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.75 E-value=1.9e-17 Score=136.35 Aligned_cols=106 Identities=16% Similarity=0.309 Sum_probs=94.2
Q ss_pred ccCCCCCCcccCC------ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEcc
Q 025000 150 GSTDKQPLLETPG------EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQ 223 (259)
Q Consensus 150 ~~~~di~~~~~~g------~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~ 223 (259)
.+|++++.+.+.. .++.+|+|+..+. ..+.++.++++||+.++. |.|.++|.+|||+|++.+.+||+++.++
T Consensus 10 ~~w~~v~~~~~~~~~~~p~~g~~~~~L~~~~~-~~~~~~~~~l~pG~~~~~-H~H~~~E~~~Vl~G~~~v~v~g~~~~l~ 87 (156)
T 3kgz_A 10 GRWDGVAVMPYKQTAEAPFQDVSRQLLFADPN-LACEWRYFEVDEGGYSTL-ERHAHVHAVMIHRGHGQCLVGETISDVA 87 (156)
T ss_dssp TEETTCCCEECCCCSSCSSEEEEEEEEECCTT-CSEEEEEEEEEEEEECCC-BBCSSCEEEEEEEEEEEEEETTEEEEEE
T ss_pred CCccccchhhcccCCCCCcCCeEEEEEEcCCC-CcEEEEEEEECCCCccCc-eeCCCcEEEEEEeCEEEEEECCEEEEeC
Confidence 4688998888742 3678888886553 678888999999999997 7888899999999999999999999999
Q ss_pred CCcEEEeCCCCceeEEeCCCccEEEEEEeecCCC
Q 025000 224 AGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNRN 257 (259)
Q Consensus 224 ~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~nr~ 257 (259)
+||++|++++++|++.|.|+++++||+.-...||
T Consensus 88 ~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 88 QGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp TTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred CCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 9999999999999999999999999999988887
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.74 E-value=5.7e-17 Score=153.48 Aligned_cols=204 Identities=14% Similarity=0.109 Sum_probs=142.0
Q ss_pred CcceEEEEec--C---CC-CCc-EEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEc-C--CcEEEEeCCcEEEeCC
Q 025000 47 TNTLGAYLIT--P---AM-GSH-FVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA-S--GVSSKLMVDSYTYLPP 116 (259)
Q Consensus 47 ~~~~~~~l~s--p---~~-g~~-f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~-~--ge~~~L~~Gd~i~~p~ 116 (259)
++..++++.. + .+ +.. +.+.+++|+||+..++|++..+|++||++|++.+.+. . ++++.|++||.++||+
T Consensus 38 e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~ 117 (434)
T 2ea7_A 38 EWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPA 117 (434)
T ss_dssp TTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECT
T ss_pred CCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECC
Confidence 3455566533 2 22 344 9999999999998888877899999999999999872 1 5789999999999999
Q ss_pred CCcEEEEeC---CeEEEEEEEEec-cc-------cCCC-CcceeeccCC----------------CCC-C----------
Q 025000 117 NFAHSLRAE---GSATLVVFERRY-AS-------LENH-ITEQIVGSTD----------------KQP-L---------- 157 (259)
Q Consensus 117 ~~~H~~~N~---~~a~~l~v~~~y-~p-------~~g~-~p~~~v~~~~----------------di~-~---------- 157 (259)
|..|.+.|. ++++++.+...- .| +.|. .|..+.+... .++ .
T Consensus 118 G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~~ 197 (434)
T 2ea7_A 118 GTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRGFSKNILEASFDSDFKEINRVLFGEERQQQQGEE 197 (434)
T ss_dssp TCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCC---------
T ss_pred CccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhcCCHHHHHHHhCCCHHHHHhhhhccccccccccc
Confidence 999999994 367777664321 11 1110 0000000000 001 0
Q ss_pred --------------------------------c----------c-c--CCceEEEEEeeCCCCC----cceEEEEEEecC
Q 025000 158 --------------------------------L----------E-T--PGEVFQLRKLLPQAVP----FDFNIHIMDFQP 188 (259)
Q Consensus 158 --------------------------------~----------~-~--~g~~~~~~~l~p~~~~----~~~~~~~~t~~P 188 (259)
. + + +|| .++.+.+.+.. -++.+..+.|.|
T Consensus 198 ~q~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~~~~gG--~v~~~~~~~~P~L~~l~is~a~v~l~p 275 (434)
T 2ea7_A 198 SREEGVIVELKREQIQELMKHAKSSSRKELSSQDEPFNLRNSKPIYSNKFG--RWYEMTPEKNPQLKDLDVFISSVDMKE 275 (434)
T ss_dssp CCCSSSEEECCHHHHHHHHTTSBCCCSSCTTCSSSCEETTSSCCSEEETTE--EEEEECTTTCHHHHHHTEEEEEEEECT
T ss_pred ccccceEEECCcccChhhcccccccCCCCCCCcccceeeccCCCceeCCCc--EEEEEChhhCccccccCcceEEEEEcC
Confidence 0 0 0 122 23334444432 247888999999
Q ss_pred CcccCcceeecc-ceEEEEEEceEEEEeCCE----------------EE--EccCCcEEEeCCCCceeEEeCCCccEEEE
Q 025000 189 GDFLNVKEVHYN-QHGLLLLEGQGIYRLGDS----------------WY--PVQAGDVLWMAPFVPQWYAALGKTRTRYL 249 (259)
Q Consensus 189 G~~~~~~~~H~~-eh~~~il~G~g~~~~~g~----------------~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi 249 (259)
|+..+. |.|.. .|.+||++|+|++.+-+. .+ .|++||++++|.|.+|++.|+ +++.|+
T Consensus 276 G~m~~p-H~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v 352 (434)
T 2ea7_A 276 GALLLP-HYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFF 352 (434)
T ss_dssp TEEEEE-EEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEE
T ss_pred Ceeecc-EEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEE
Confidence 999975 67764 488999999999977643 45 899999999999999999999 589999
Q ss_pred EEeecC
Q 025000 250 LYKDVN 255 (259)
Q Consensus 250 ~~k~~n 255 (259)
++++-.
T Consensus 353 ~f~~~~ 358 (434)
T 2ea7_A 353 AFGINA 358 (434)
T ss_dssp EEEETC
T ss_pred EEECCC
Confidence 998644
No 19
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.74 E-value=1.1e-16 Score=149.85 Aligned_cols=188 Identities=11% Similarity=0.069 Sum_probs=137.1
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEE---cCCcEEEEeCCcE------EEeCCCCcEEEEeC---CeEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN---ASGVSSKLMVDSY------TYLPPNFAHSLRAE---GSAT 129 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v---~~ge~~~L~~Gd~------i~~p~~~~H~~~N~---~~a~ 129 (259)
++.+.+++++||+...+|.|..+|++||++|++.+.+ ++.+++.|++||. ++||+|..|.+.|. ++++
T Consensus 51 ~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~ 130 (397)
T 2phl_A 51 DYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLR 130 (397)
T ss_dssp TCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEE
T ss_pred cEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeE
Confidence 4999999999998877777899999999999999998 2346789999999 99999999999993 3677
Q ss_pred EEEEEEecc-c------cCCCC-cceeeccCC----------------CCC-Cc--------------------------
Q 025000 130 LVVFERRYA-S------LENHI-TEQIVGSTD----------------KQP-LL-------------------------- 158 (259)
Q Consensus 130 ~l~v~~~y~-p------~~g~~-p~~~v~~~~----------------di~-~~-------------------------- 158 (259)
++.+...-. | +.|.. +..+...+. .++ .+
T Consensus 131 ~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~~~~~vLa~af~v~~~~v~~l~~~~~~q~~~~Iv~~~~~~~~~~~~~~~~~ 210 (397)
T 2phl_A 131 IIQLAMPVNNPQIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQIKELSKHAKSS 210 (397)
T ss_dssp EEEEEEESSSSSCCEEECCCBTTBCCGGGGSCHHHHHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTTHHHHHHHHHTC
T ss_pred EEEeecCCCCccceeeeccCCCchhHHhhcCCHHHHHHHhCCCHHHHHhhhhcccccccCceEEcCcccchhhhccCCCc
Confidence 776643211 1 11110 000000000 001 00
Q ss_pred ---------c-c--CCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeCCE-------
Q 025000 159 ---------E-T--PGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDS------- 218 (259)
Q Consensus 159 ---------~-~--~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~g~------- 218 (259)
+ + .+|. ++.+.+.+ .++.+..++|+||+..+. |.|. ..|.+||++|+|++.+-+.
T Consensus 211 ~~~~l~~~~p~~~n~~G~--~~~v~~~~--l~is~a~v~l~pG~~~~P-H~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~ 285 (397)
T 2phl_A 211 SRKSLSKQDNTIGNEFGN--LTERTDNS--LNVLISSIEMEEGALFVP-HYYSKAIVILVVNEGEAHVELVGPKGNKETL 285 (397)
T ss_dssp ---------CEEEETTEE--EEEEEETT--TTEEEEEEEECTTEEEEE-EEESSCEEEEEEEESEEEEEEEEECC--CCS
T ss_pred ccccccccCCcccCCCCe--EEEEeecc--CCeeEEEEEEcCCcEeee-eEcCCCCEEEEEEeeeEEEEEEeccccccCC
Confidence 1 0 1232 23334444 678899999999999886 6776 4488999999999988765
Q ss_pred -----EEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecCC
Q 025000 219 -----WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 256 (259)
Q Consensus 219 -----~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~nr 256 (259)
...|++||++++|.|.+|++.|+| +++|+++++-.+
T Consensus 286 g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~ 326 (397)
T 2phl_A 286 EYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINAN 326 (397)
T ss_dssp CEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCT
T ss_pred CceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCC
Confidence 678999999999999999999996 899999977543
No 20
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.72 E-value=5e-16 Score=147.85 Aligned_cols=190 Identities=14% Similarity=0.162 Sum_probs=134.8
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEc-CC------------------------cEEEEeCCcEEEeC
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA-SG------------------------VSSKLMVDSYTYLP 115 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~-~g------------------------e~~~L~~Gd~i~~p 115 (259)
+++.+.+++|+||+-..+|.|...|++||++|++.+.+. .| +.+.|++||.++||
T Consensus 61 ~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iP 140 (459)
T 2e9q_A 61 AGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVP 140 (459)
T ss_dssp HTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEEC
T ss_pred CceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEEC
Confidence 578899999999998888877889999999999999882 12 35699999999999
Q ss_pred CCCcEEEEe--CCeEEEEEEEEecc---ccC---------CCC-c---------------------ceeeccCC------
Q 025000 116 PNFAHSLRA--EGSATLVVFERRYA---SLE---------NHI-T---------------------EQIVGSTD------ 153 (259)
Q Consensus 116 ~~~~H~~~N--~~~a~~l~v~~~y~---p~~---------g~~-p---------------------~~~v~~~~------ 153 (259)
+|++|.+.| +++++++.+...-- +++ |.. + ..+++..+
T Consensus 141 aG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~evLa~ 220 (459)
T 2e9q_A 141 AGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSSGEKSGNIFSGFADEFLEE 220 (459)
T ss_dssp TTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------------CCCCTTTTSCHHHHHH
T ss_pred CCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccccccccccchhhcCCHHHHHh
Confidence 999999999 45788887654221 111 110 0 00000000
Q ss_pred ----------------C-----------C----CC----c---cc---------CC------------------------
Q 025000 154 ----------------K-----------Q----PL----L---ET---------PG------------------------ 162 (259)
Q Consensus 154 ----------------d-----------i----~~----~---~~---------~g------------------------ 162 (259)
+ + |. . +. .|
T Consensus 221 aF~v~~~~v~kL~~~~~~~G~Iv~~~~~l~~~~P~~~~~e~~~~~~~~~~~~~~~g~~e~~~~~~l~~n~~~~~~~~~~~ 300 (459)
T 2e9q_A 221 AFQIDGGLVRKLKGEDDERDRIVQVDEDFEVLLPEKDEEERSRGRYIESESESENGLEETICTLRLKQNIGRSERADVFN 300 (459)
T ss_dssp HHTCCHHHHHHHHTTTCCSTTEEECCSSCCTTTTC------------------------CGGGSCCEEECSTTSCCSEEE
T ss_pred hcCCCHHHHHhhhhcccCCccEEEeCCcccccCCccchhhhcccccccccccccCCccccccceeeeecccccccCCccc
Confidence 0 0 00 0 00 00
Q ss_pred --ceEEEEEeeCCCCC--c--ceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEeCC----EEEE--ccCCcEEE
Q 025000 163 --EVFQLRKLLPQAVP--F--DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGD----SWYP--VQAGDVLW 229 (259)
Q Consensus 163 --~~~~~~~l~p~~~~--~--~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~~g----~~~~--v~~GD~i~ 229 (259)
++ .++.+.+.+.- . ++.+..+.|.||+..+. |.|... |.+||++|+|++.+-+ +.+. |++||+++
T Consensus 301 ~~gG-~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~p-H~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v 378 (459)
T 2e9q_A 301 PRGG-RISTANYHTLPILRQVRLSAERGVLYSNAMVAP-HYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLM 378 (459)
T ss_dssp TTTE-EEEEECTTTSTTHHHHTCEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCe-eEEEeccccCccccccccceEEEEeeCCcCccc-eECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEE
Confidence 00 11222222221 2 68889999999999985 677654 8899999999999876 5655 99999999
Q ss_pred eCCCCceeEEeCCCccEEEEEEee
Q 025000 230 MAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 230 ~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
+|.|.+|.+.| |+++++||++++
T Consensus 379 ~P~G~~H~~~n-g~~~~~~l~~~~ 401 (459)
T 2e9q_A 379 IPQNFVVIKRA-SDRGFEWIAFKT 401 (459)
T ss_dssp ECTTCEEEEEE-EEEEEEEEEEES
T ss_pred ECCCCEEEEEe-CCCCeEEEEEec
Confidence 99999999999 899999999975
No 21
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.72 E-value=2.9e-16 Score=150.85 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=64.8
Q ss_pred ceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeCC----EEEE--ccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGD----SWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~g----~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+.+..++|+||+..+. |.|. ..|.+|||+|++.+.+.+ +.+. |++||++++|+|.+|++.| |+++++|++
T Consensus 371 ~is~a~v~L~PG~~~~p-H~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~ 448 (510)
T 3c3v_A 371 GLSAEYGNLYRNALFVP-HYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVA 448 (510)
T ss_dssp TCEEEEEEEETTCEEEE-EEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEE
T ss_pred eEEEEEEEecCCceecc-eECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEE
Confidence 67889999999999986 6776 569999999999998854 4444 9999999999999999999 899999999
Q ss_pred Ee
Q 025000 251 YK 252 (259)
Q Consensus 251 ~k 252 (259)
+.
T Consensus 449 f~ 450 (510)
T 3c3v_A 449 FK 450 (510)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 22
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.71 E-value=3.6e-16 Score=149.97 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=63.7
Q ss_pred eEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeCCE----E--EEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGDS----W--YPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~g~----~--~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+.+..++|+||+.++. |.|.. .|.+|||+|++.+.+.+. . ..|++||++++|+|.+|++.| ++++++||++
T Consensus 367 ls~a~v~l~pG~~~~p-H~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~ 444 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSP-HWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVF 444 (493)
T ss_dssp CEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEE
T ss_pred eEEEEEEccCCceeee-eECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEE
Confidence 7899999999999986 67774 588999999999988653 3 459999999999999999998 5699999999
Q ss_pred ee
Q 025000 252 KD 253 (259)
Q Consensus 252 k~ 253 (259)
.+
T Consensus 445 ~t 446 (493)
T 2d5f_A 445 KT 446 (493)
T ss_dssp ES
T ss_pred EC
Confidence 74
No 23
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.70 E-value=1.6e-16 Score=132.13 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=94.8
Q ss_pred eeeccCCCCCCcccCC------ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEE
Q 025000 147 QIVGSTDKQPLLETPG------EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWY 220 (259)
Q Consensus 147 ~~v~~~~di~~~~~~g------~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~ 220 (259)
.-..+|++++...++. .++..|.|+..+. ..+.+++++++||+.++. |.|.++|.+|||+|++.+.+||+++
T Consensus 16 ~~~~~w~~v~~~~~~~~~~~p~~gv~~r~L~~~~~-~~~~~~~~~l~pG~~~~~-H~H~~~E~~~Vl~G~~~~~v~g~~~ 93 (166)
T 3jzv_A 16 QSQYRWPGVDLLAYKEEGSAPFRSVTRQVLFSGNG-LTGELRYFEVGPGGHSTL-ERHQHAHGVMILKGRGHAMVGRAVS 93 (166)
T ss_dssp CCCCCCTTSCEEECCCC-CCSCEEEEEEEEECCTT-CSEEEEEEEEEEEEECCC-BBCSSCEEEEEEEECEEEEETTEEE
T ss_pred cCCcCcccChhhhcccCCCcccCCeEEEEEECCCC-CeEEEEEEEECCCCccCc-eeCCCcEEEEEEeCEEEEEECCEEE
Confidence 3456788998888742 4567888886553 667888999999999997 6788889999999999999999999
Q ss_pred EccCCcEEEeCCCCceeEEeCCCccEEEEEEeecCCC
Q 025000 221 PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNRN 257 (259)
Q Consensus 221 ~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~nr~ 257 (259)
.+++||++|+++|++|++.|.|+++++||+.-...||
T Consensus 94 ~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~~d 130 (166)
T 3jzv_A 94 AVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAERD 130 (166)
T ss_dssp EECTTCEEEECTTCCEEEECCTTSCEEEEEEEESSCC
T ss_pred EeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCCC
Confidence 9999999999999999999999999999999887776
No 24
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.70 E-value=6.5e-16 Score=146.63 Aligned_cols=187 Identities=13% Similarity=0.122 Sum_probs=132.3
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEc-C--CcEEEEeCCcEEEeCCCCcEEEEeC---CeEEEEEEEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA-S--GVSSKLMVDSYTYLPPNFAHSLRAE---GSATLVVFER 135 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~-~--ge~~~L~~Gd~i~~p~~~~H~~~N~---~~a~~l~v~~ 135 (259)
.+.+.+++++||+..++|+|..+|++||++|++++.+. . ++++.|++||.++||+|.+|.+.|. ++++++++..
T Consensus 85 ~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~ 164 (445)
T 2cav_A 85 DYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAI 164 (445)
T ss_dssp TEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEE
T ss_pred cEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEec
Confidence 49999999999998888878899999999999999871 1 3789999999999999999999993 4788887765
Q ss_pred ecc-c-------cCCC-CcceeeccCC----------------CCCC-c-------------------------------
Q 025000 136 RYA-S-------LENH-ITEQIVGSTD----------------KQPL-L------------------------------- 158 (259)
Q Consensus 136 ~y~-p-------~~g~-~p~~~v~~~~----------------di~~-~------------------------------- 158 (259)
+-. | +.|. .|..+.+... .++. .
T Consensus 165 ~~~~pg~~~~F~laG~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~ 244 (445)
T 2cav_A 165 TFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMPKDQIQEISKHAQSSSRKTLSS 244 (445)
T ss_dssp CCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECCCC-------------------
T ss_pred cCCCCCceeeeeccCCCchhhhhhcCCHHHHHHHhCCCHHHHHhhhcccCCCCcEEEeCCcchhhhcccccccCCCCCCC
Confidence 221 1 1110 0111111010 0110 0
Q ss_pred -----------c-c--CCceEEEEEeeCCCCC----cceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEeC---
Q 025000 159 -----------E-T--PGEVFQLRKLLPQAVP----FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLG--- 216 (259)
Q Consensus 159 -----------~-~--~g~~~~~~~l~p~~~~----~~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~~--- 216 (259)
+ + .+| .+..+.+.+.. -++.+.++.|.||+..+. |.|... |..||++|+|.+.+=
T Consensus 245 ~~~~~~l~~~~p~~~~~~G--~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~P-H~hp~A~ei~~V~~G~~~v~vv~~~ 321 (445)
T 2cav_A 245 QDKPFNLRSRDPIYSNNYG--KLYEITPEKNSQLRDLDILLNCLQMNEGALFVP-HYNSRATVILVANEGRAEVELVGLE 321 (445)
T ss_dssp -CCCEETTSSCCSEESSSE--EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEEESCEEEEEEEC-
T ss_pred cccceeccccCCCccCCCc--eEEEeChHHCcccccCCCceEEEEeeCCceeee-EECCCCcEEEEEEeeEEEEEEEeCC
Confidence 0 0 011 11222232221 158899999999999986 677655 778999999977653
Q ss_pred C---------E----EEEccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 217 D---------S----WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 217 g---------~----~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
+ + ...+++||++++|.|.+|...|+ +++.|+.|+.
T Consensus 322 ~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~ 369 (445)
T 2cav_A 322 QQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGV 369 (445)
T ss_dssp ----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEE
T ss_pred CcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEc
Confidence 2 2 55699999999999999999999 5799999984
No 25
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.69 E-value=2.1e-16 Score=126.06 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=94.5
Q ss_pred ceeeccCCCCCCcccC--C-ceEEEEEeeC-CCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEE--eCCEE
Q 025000 146 EQIVGSTDKQPLLETP--G-EVFQLRKLLP-QAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSW 219 (259)
Q Consensus 146 ~~~v~~~~di~~~~~~--g-~~~~~~~l~p-~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~--~~g~~ 219 (259)
.+.+.+++|+++.+.. + .++..++|+. .+....+.+..++++||+.++. |.|..+|.+|||+|++.+. ++|+.
T Consensus 2 ~m~v~~~~~v~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~ 80 (145)
T 3ht1_A 2 MMKRVHRTDVKAEIVREPGAKETTHRKLIDTPDGADRFVLTEFEVSPNGSTPP-HFHEWEHEIYVLEGSMGLVLPDQGRT 80 (145)
T ss_dssp CCCCCCGGGSCCEECCSTTCEEEEEEEEECGGGTCCSEEEEEEEEEEEEECCC-EECSSCEEEEEEEECEEEEEGGGTEE
T ss_pred cceEeehhhCCHhHcCCCCCCCcEEEEEEccCCCCCcEEEEEEEECCCCcCCC-ccCCCceEEEEEEeEEEEEEeECCEE
Confidence 3567889999999984 3 6677888775 4445688899999999999996 7888888899999999999 99999
Q ss_pred EEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecC
Q 025000 220 YPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 255 (259)
Q Consensus 220 ~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~n 255 (259)
+.+++||++++++|++|++.|.|++++++++.-.-+
T Consensus 81 ~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 81 EEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp EEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred EEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 999999999999999999999999999999876443
No 26
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.68 E-value=8.7e-16 Score=127.51 Aligned_cols=106 Identities=19% Similarity=0.298 Sum_probs=89.0
Q ss_pred cCCCCCCcccC--C---ceEEEEEeeCCCC---CcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEc
Q 025000 151 STDKQPLLETP--G---EVFQLRKLLPQAV---PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPV 222 (259)
Q Consensus 151 ~~~di~~~~~~--g---~~~~~~~l~p~~~---~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v 222 (259)
.|++++..++. + .++..++|+..+. ...+.++.++++||+.++. |.|..+|.+|||+|++.+.++|+.+.+
T Consensus 20 ~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~g~~~~~~~~~~~~l~pG~~~~~-H~H~~~E~~~Vl~G~~~~~i~~~~~~l 98 (167)
T 3ibm_A 20 RWEGTEEEAYKAEGTHFSGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTL-ERHEHTHVVMVVRGHAEVVLDDRVEPL 98 (167)
T ss_dssp EETTCCCC---------CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCC-BBCSSCEEEEEEESEEEEEETTEEEEE
T ss_pred ccccceeeeccCCCCcCCCcEEEEEECCCCCCCCCcEEEEEEEECCCCCCCC-ccCCCcEEEEEEeCEEEEEECCEEEEE
Confidence 46666665542 2 3567888886544 3578899999999999997 677889999999999999999999999
Q ss_pred cCCcEEEeCCCCceeEEeCC-CccEEEEEEeecCCC
Q 025000 223 QAGDVLWMAPFVPQWYAALG-KTRTRYLLYKDVNRN 257 (259)
Q Consensus 223 ~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k~~nr~ 257 (259)
++||++|++++++|++.|.| +++++||+.-+-.||
T Consensus 99 ~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~d 134 (167)
T 3ibm_A 99 TPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSDRD 134 (167)
T ss_dssp CTTCEEEECTTCCEEEEEESSSCCEEEEEEEESSCC
T ss_pred CCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCCcC
Confidence 99999999999999999999 999999999887776
No 27
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.65 E-value=1.7e-15 Score=124.41 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=92.7
Q ss_pred CcceeeccCCCCCCcccCCceEEEEEee-CC-CCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC----
Q 025000 144 ITEQIVGSTDKQPLLETPGEVFQLRKLL-PQ-AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD---- 217 (259)
Q Consensus 144 ~p~~~v~~~~di~~~~~~g~~~~~~~l~-p~-~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g---- 217 (259)
.+.+++.++++++...+...++..+.|+ +. .....+.+..++++||..++. |.|..+|.+|||+|++.+.++|
T Consensus 4 ~~~~~v~~~~~~~~~~~~~~G~~~~~l~~~~~~g~~~~~~~~~~~~pg~~~~~-H~H~~~E~~~Vl~G~~~~~~~~~~~~ 82 (163)
T 1lr5_A 4 RDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPI-HRHSCEEVFTVLKGKGTLLMGSSSLK 82 (163)
T ss_dssp CCCCSEEEGGGSCCBCTTCTTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCE-EEESSCEEEEEEECCEEEEECCSSSS
T ss_pred CCccEecChHHCChhhccCCCcceEEEeccccCCCCcEEEEEEEECCCCcCCC-eECCCCeEEEEEeCEEEEEECCcccc
Confidence 4678899999999999843334555554 43 334578889999999999986 6778889999999999999999
Q ss_pred -----EEEEccCCcEEEeCCCCceeEEeCC-CccEEEEEEee
Q 025000 218 -----SWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYKD 253 (259)
Q Consensus 218 -----~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k~ 253 (259)
+.+.+++||++|+++|++|++.|.| +++++||+.-.
T Consensus 83 ~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~ 124 (163)
T 1lr5_A 83 YPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIIS 124 (163)
T ss_dssp SCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEE
T ss_pred ccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEEC
Confidence 9999999999999999999999999 99999998754
No 28
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.65 E-value=5.9e-14 Score=122.80 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=120.6
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEe-ccc
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR-YAS 139 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~-y~p 139 (259)
..+.+..+.+ .|.... -....+|++|||+|+++|+. +|+++++++||+++||.|..++|...++++.+++... +.
T Consensus 45 ~~~~~G~~~~-~g~~~v-~~~p~dE~~~VleG~~~lt~-~g~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~~~~- 120 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSV-EAYPYTEMLVMHRGSVTLTS-GTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCASTQAS- 120 (238)
T ss_dssp TSEEEEEEEE-CSEEEE-SSCSSEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTCCEEEEECTTEEEEEEEECSCC-
T ss_pred CCeEEEEEEe-cccccc-ccCCCcEEEEEEEeEEEEEC-CCeEEEEcCCCEEEECCCCEEEEEecCCeEEEEEeccCCC-
Confidence 4677777777 554332 12346899999999999998 9999999999999999999999999888988887644 22
Q ss_pred cCCCCcceeeccCCCCCCcc---------cCC-ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEc
Q 025000 140 LENHITEQIVGSTDKQPLLE---------TPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEG 209 (259)
Q Consensus 140 ~~g~~p~~~v~~~~di~~~~---------~~g-~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G 209 (259)
.++ .+..+-. -.+.+..+ ..| -..+.+.+...+ ...+..-+..-.||..+++ ++...|..|||||
T Consensus 121 ~p~-~~~~~~i-~~~~~l~P~~~p~p~~~l~G~P~~~~~~~~~~~-~g~~~~GiW~~tpG~~~~~--~~~~~E~~~ILeG 195 (238)
T 3myx_A 121 GPD-KSGITAL-DRLALLTPSSPPDPSIMISPLPQCRSNNLFEDT-ASTLRIGVWDSTPYERISR--PHKIHELMNLIEG 195 (238)
T ss_dssp SCC-CCSEEEE-CTTCCCEEECCCCGGGBSSCCCCEEEEEEEECS-SSSCEEEEEEECCEEBCCE--ECSSCEEEEEEEC
T ss_pred CCC-CCccEEe-cCCCCCCCCCCCChhheecCCchheeeEEEECC-CCCEEEeEEEeCCCEEECC--cCCCCEEEEEEEe
Confidence 122 2322211 11222222 244 222333343322 2345556888899997653 4456689999999
Q ss_pred eEEEEe-CCEEEEccCCcEEEeCCCCceeEEeC
Q 025000 210 QGIYRL-GDSWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 210 ~g~~~~-~g~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
+..++. +|+.+.+++||.+++++|..=...-.
T Consensus 196 ~v~lt~~~G~~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 196 RVVLSLENGSSLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp CEEEEETTSCEEEECTTCEEEECTTCEEEEEES
T ss_pred EEEEEeCCCCEEEECCCCEEEECCCCEEEEEEC
Confidence 999998 67889999999999999988555554
No 29
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=99.63 E-value=2.8e-14 Score=123.95 Aligned_cols=200 Identities=17% Similarity=0.182 Sum_probs=138.7
Q ss_pred EEECCCCceeccCCCCCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCc
Q 025000 31 ALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDS 110 (259)
Q Consensus 31 avi~pe~~v~~~lp~~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd 110 (259)
.++.++...+...| ..+.....|............++.++||+..+.|.|.+.|.+|||+|+++ . ++ ..+.+||
T Consensus 12 v~i~~~~~~W~~~~-~~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d-~~--~~~~~Gd 85 (223)
T 3o14_A 12 VVIDTDQLEWRPSP-MKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--D-EH--GDYPAGT 85 (223)
T ss_dssp EEEEGGGSCCEECS-STTEEEEEEEEESSSSCEEEEEEEECTTEECCCEECTTCEEEEEEEEEEE--E-TT--EEEETTE
T ss_pred EEeeCccCCceeCC-CCCEEEEEeecCCCccccEEEEEEECCCCCcccccCCCCEEEEEEEeEEE--E-CC--eEECCCe
Confidence 34444444444433 24455566644332233456789999999999998877888899999976 3 33 4799999
Q ss_pred EEEeCCCCcEEEEeCCeEEEEEEEEeccccCCCCcceeeccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCc
Q 025000 111 YTYLPPNFAHSLRAEGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGD 190 (259)
Q Consensus 111 ~i~~p~~~~H~~~N~~~a~~l~v~~~y~p~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~ 190 (259)
+++.|+|..|....++.|.+++....+.+.+- +. + +.+...+.+-..+++....|...+ .-.++...++||.
T Consensus 86 ~~~~P~g~~H~p~a~~gc~~~vk~~~~~~~d~--~~-v--~~~~~~W~~~~~~Gv~~~~L~~~~---~E~v~l~r~~~G~ 157 (223)
T 3o14_A 86 YVRNPPTTSHVPGSAEGCTIFVKLWQFDPADR--TQ-F--SKNMEAELGAPVEGISTSLLHEDE---RETVTHRKLEPGA 157 (223)
T ss_dssp EEEECTTCEECCEESSCEEEEEEESCSCTTCC--BC-E--EEETTTTCCCCBTTEEEEEEEECS---SCEEEEEEECTTC
T ss_pred EEEeCCCCccccEeCCCCEEEEEecCCCCCcc--cc-c--ccchhcccccCCCCeEEEEEecCC---CcEEEEEEECCCC
Confidence 99999999999887777888888777765442 32 2 444555555422334444454433 2356788899999
Q ss_pred ccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 191 FLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 191 ~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
.++. |.| ..+++|||+|+ +.+++. ...+||.+..|++..|...+ |++.+. |+.|
T Consensus 158 ~~~~-~~h-gG~EilVL~G~--~~d~~~--~~~~GsWlR~P~gs~h~~~a-g~~g~~-i~~k 211 (223)
T 3o14_A 158 NLTS-EAA-GGIEVLVLDGD--VTVNDE--VLGRNAWLRLPEGEALSATA-GARGAK-IWMK 211 (223)
T ss_dssp EEEE-CCS-SCEEEEEEEEE--EEETTE--EECTTEEEEECTTCCEEEEE-EEEEEE-EEEE
T ss_pred ccCC-CCC-CcEEEEEEEeE--EEECCc--eECCCeEEEeCCCCccCcEE-CCCCeE-EEEE
Confidence 9987 456 44557999998 557775 56799999999999999998 677766 5555
No 30
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.61 E-value=3e-15 Score=124.37 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=66.2
Q ss_pred CcEEEEEEEecC-CCcCCC-CCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEE
Q 025000 61 SHFVMYLANMQE-NARSAL-PPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFER 135 (259)
Q Consensus 61 ~~f~~~~~~l~P-g~~~~~-h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~ 135 (259)
..|++++++|+| |++... ++|.+||++|||+|++++++ +|+++.|++||++|||++.+|+|+| +.+|+++|+..
T Consensus 86 ~~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl-~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq~ 163 (166)
T 2vpv_A 86 EYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV-CKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQV 163 (166)
T ss_dssp CSCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred ccceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE-CCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEEEE
Confidence 478888999999 655543 47889999999999999999 9999999999999999999999999 66899999854
No 31
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.59 E-value=2.1e-14 Score=126.01 Aligned_cols=94 Identities=9% Similarity=0.139 Sum_probs=82.5
Q ss_pred cCCCCCcceEEEEecCCCCCcEEEEEEEecCCCcCCC-CCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcE
Q 025000 42 PLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSAL-PPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAH 120 (259)
Q Consensus 42 ~lp~~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~-h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H 120 (259)
.+++-++...+.|..+..+..+.+.+++++||++.+. ++|..||++|||+|++++++ +|+++.|++||+++++++.+|
T Consensus 144 ~~~~~~g~~~r~l~p~~~~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~-~~~~~~l~~GD~~~~~~~~pH 222 (246)
T 1sfn_A 144 PFEGDDHLIARKLLPDEPAFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL-EENYYPVTAGDIIWMGAHCPQ 222 (246)
T ss_dssp ETTSCTTEEEEECSCCCTTCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE-TTEEEEEETTCEEEECTTCCE
T ss_pred ccCCCCCeEEEEeCCCccCCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE-CCEEEEcCCCCEEEECCCCCE
Confidence 4566666666666666778899999999999998876 46889999999999999999 999999999999999999999
Q ss_pred EEEe--CCeEEEEEEEEe
Q 025000 121 SLRA--EGSATLVVFERR 136 (259)
Q Consensus 121 ~~~N--~~~a~~l~v~~~ 136 (259)
+|+| ++++++++++..
T Consensus 223 ~~~n~g~~~~~yl~~kd~ 240 (246)
T 1sfn_A 223 WYGALGRNWSKYLLYKDM 240 (246)
T ss_dssp EEEEESSSCEEEEEEEEC
T ss_pred EEEcCCCCCEEEEEEEec
Confidence 9999 678999999754
No 32
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.58 E-value=6.5e-15 Score=123.09 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=71.5
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcC-CcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEec
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRY 137 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~-ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~y 137 (259)
.++.+++++++||+..+.|.|.++|++|||+|++++++ + |+++.|++||++ ||++.+|+|+| +++++++|+..+.
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~l-d~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~ 154 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELEL-DDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEA 154 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEEC-GGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEEC
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEE-CCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCC
Confidence 47888999999999999999999999999999999999 7 899999999999 99999999999 6689999998776
Q ss_pred ccc
Q 025000 138 ASL 140 (259)
Q Consensus 138 ~p~ 140 (259)
.|+
T Consensus 155 ~p~ 157 (172)
T 3es1_A 155 PAY 157 (172)
T ss_dssp CCC
T ss_pred Cce
Confidence 553
No 33
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.57 E-value=2e-14 Score=114.39 Aligned_cols=88 Identities=20% Similarity=0.282 Sum_probs=76.0
Q ss_pred ceEEEEEee-CCCC-CcceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEE
Q 025000 163 EVFQLRKLL-PQAV-PFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYA 239 (259)
Q Consensus 163 ~~~~~~~l~-p~~~-~~~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~ 239 (259)
+++..+.++ |.+. +..+.+..++++||+.++. |.|. .+|.+|||+|++.+.++|+++.+++||+++++++++|++.
T Consensus 39 g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~ 117 (133)
T 1o4t_A 39 GEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGL-HKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIE 117 (133)
T ss_dssp SEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEE-EECCSEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCEEEEE
T ss_pred CeEEEEEccChhhCCCceEEEEEEEECCCCccCc-eECCCccEEEEEEeCEEEEEECCEEEEeCCCcEEEECCCCcEEeE
Confidence 556666555 5554 4567788999999999986 5665 7899999999999999999999999999999999999999
Q ss_pred eCCCccEEEEEE
Q 025000 240 ALGKTRTRYLLY 251 (259)
Q Consensus 240 n~G~e~~~fi~~ 251 (259)
|.|+++++|++.
T Consensus 118 n~~~~~~~~l~v 129 (133)
T 1o4t_A 118 NTGNTDLEFLAV 129 (133)
T ss_dssp CCSSSCEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999999999874
No 34
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.55 E-value=3e-14 Score=117.17 Aligned_cols=89 Identities=13% Similarity=0.169 Sum_probs=79.4
Q ss_pred CCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-
Q 025000 46 WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 124 (259)
Q Consensus 46 ~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N- 124 (259)
+.+...++|+++.. ..|++.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||++++|++.+|+++|
T Consensus 28 ~~g~~~~~L~~~~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v-~g~~~~l~~Gd~i~ip~~~~H~~~n~ 105 (156)
T 3kgz_A 28 FQDVSRQLLFADPN-LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV-GETISDVAQGDLVFIPPMTWHQFRAN 105 (156)
T ss_dssp SEEEEEEEEECCTT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCCEEEECC
T ss_pred cCCeEEEEEEcCCC-CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEeC
Confidence 45677788888764 78999999999999988888889999999999999999 9999999999999999999999999
Q ss_pred -CCeEEEEEEEEe
Q 025000 125 -EGSATLVVFERR 136 (259)
Q Consensus 125 -~~~a~~l~v~~~ 136 (259)
+++++++++...
T Consensus 106 g~~~~~~l~i~~~ 118 (156)
T 3kgz_A 106 RGDCLGFLCVVNA 118 (156)
T ss_dssp SSSCEEEEEEEES
T ss_pred CCCCEEEEEEEeC
Confidence 568888888643
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.55 E-value=1.1e-13 Score=114.85 Aligned_cols=90 Identities=16% Similarity=0.245 Sum_probs=79.9
Q ss_pred CCcceEEEEecCCCC---CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEE
Q 025000 46 WTNTLGAYLITPAMG---SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSL 122 (259)
Q Consensus 46 ~~~~~~~~l~sp~~g---~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~ 122 (259)
+.+...++|+++..| ..|.+.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||+++||++.+|++
T Consensus 36 ~~g~~~~~L~~~~~g~~~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~ip~~~~H~~ 114 (167)
T 3ibm_A 36 FSGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL-DDRVEPLTPLDCVYIAPHAWHQI 114 (167)
T ss_dssp -CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE-TTEEEEECTTCEEEECTTCCEEE
T ss_pred CCCcEEEEEECCCCCCCCCcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCcEEE
Confidence 467788899998873 58999999999999988888889999999999999999 99999999999999999999999
Q ss_pred EeC---CeEEEEEEEEe
Q 025000 123 RAE---GSATLVVFERR 136 (259)
Q Consensus 123 ~N~---~~a~~l~v~~~ 136 (259)
+|. ++++++++..+
T Consensus 115 ~n~~~~~~~~~l~i~~~ 131 (167)
T 3ibm_A 115 HATGANEPLGFLCIVDS 131 (167)
T ss_dssp EEESSSCCEEEEEEEES
T ss_pred EeCCCCCCEEEEEEEeC
Confidence 993 47888887543
No 36
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.54 E-value=1.7e-14 Score=108.59 Aligned_cols=74 Identities=11% Similarity=-0.012 Sum_probs=66.8
Q ss_pred cceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEeCC--EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGD--SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~~g--~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
..+.+..++++||+.++. |+|..+ +.+|||+|++.+.++| +.+.+++||.+|++++.+|++.|.|+++++||+.
T Consensus 16 ~~~~~~~~~~~Pg~~~~~-H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGW-HRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SSEEEEEEEECTTCBCCS-EECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCCCCC-EECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 356778899999999997 666665 6999999999999998 8999999999999999999999999999999874
No 37
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.54 E-value=3.8e-14 Score=111.56 Aligned_cols=89 Identities=15% Similarity=0.224 Sum_probs=79.0
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCC
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
.++..+.|.+.+....+.+..++++||..++. |.|..+|.+||++|++.+.++|+++.+++||++++++|++|++.|.|
T Consensus 32 ~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~ 110 (126)
T 1vj2_A 32 RGVRKRVLIGLKDAPNFVMRLFTVEPGGLIDR-HSHPWEHEIFVLKGKLTVLKEQGEETVEEGFYIFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEEEEEEEECTTTCSSEEEEEEEEEEEEEEEE-ECCSSCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCEEEECCS
T ss_pred CCeEEEEEeCCCCCCCEEEEEEEECCCCcCCc-eeCCCcEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCcEEeEeCC
Confidence 45677777765546678888999999999985 77888899999999999999999999999999999999999999999
Q ss_pred CccEEEEEEe
Q 025000 243 KTRTRYLLYK 252 (259)
Q Consensus 243 ~e~~~fi~~k 252 (259)
+++++|++.-
T Consensus 111 ~~~~~~l~v~ 120 (126)
T 1vj2_A 111 DSEVEFLCLI 120 (126)
T ss_dssp SSCEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999998764
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.54 E-value=1.7e-14 Score=108.51 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=66.9
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCce-EEEEEEECEEEEEEcCC--cEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHDVE-RFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 134 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~E-ef~yVl~G~l~v~v~~g--e~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~ 134 (259)
+..+.+.+++++||+..+.|.|..+ |++||++|++++++ ++ +++.|++||++++|++.+|+++| +++++++++.
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~-~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v~ 93 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET-PEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIE 93 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE-TTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe-CCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEEE
Confidence 4588999999999998888877664 69999999999999 77 79999999999999999999999 5589998886
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
.
T Consensus 94 ~ 94 (97)
T 2fqp_A 94 I 94 (97)
T ss_dssp E
T ss_pred E
Confidence 4
No 39
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.54 E-value=5e-13 Score=127.05 Aligned_cols=75 Identities=11% Similarity=0.127 Sum_probs=63.4
Q ss_pred ceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEe---CC-EEE--EccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL---GD-SWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~---~g-~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
++.+..+.|+||+..+. |.|... |..||++|++.+.+ +| +.+ .|++||++++|.|.+|.. |.|+++++||.
T Consensus 322 giS~a~v~L~pGgm~~P-HwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~ 399 (466)
T 3kgl_A 322 RLSALRGSIRQNAMVLP-QWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIE 399 (466)
T ss_dssp TCEEEEEEEETTEEEEE-EEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE-EECSSEEEEEE
T ss_pred ceeeEEEEeecCcEeee-eECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEE
Confidence 68899999999999986 677554 88999999998754 33 334 599999999999999977 88999999999
Q ss_pred Eeec
Q 025000 251 YKDV 254 (259)
Q Consensus 251 ~k~~ 254 (259)
+++-
T Consensus 400 ~f~s 403 (466)
T 3kgl_A 400 FKTN 403 (466)
T ss_dssp EESS
T ss_pred EECC
Confidence 9764
No 40
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.54 E-value=3.1e-14 Score=112.08 Aligned_cols=93 Identities=18% Similarity=0.232 Sum_probs=82.2
Q ss_pred cCCCCCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEE
Q 025000 42 PLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHS 121 (259)
Q Consensus 42 ~lp~~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~ 121 (259)
.+++..+...+.|+++..+..++++.++++||+..+.|.|..+|++||++|++++.+ +++++.|++||++++|++.+|+
T Consensus 27 ~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~ip~g~~H~ 105 (126)
T 1vj2_A 27 STDKVRGVRKRVLIGLKDAPNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK-EQGEETVEEGFYIFVEPNEIHG 105 (126)
T ss_dssp CSSSEEEEEEEEEECTTTCSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC-SSCEEEEETTEEEEECTTCCEE
T ss_pred CCCCCCCeEEEEEeCCCCCCCEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE-CCEEEEECCCCEEEECCCCcEE
Confidence 456666778888888877889999999999998888888889999999999999999 9999999999999999999999
Q ss_pred EEe--CCeEEEEEEEE
Q 025000 122 LRA--EGSATLVVFER 135 (259)
Q Consensus 122 ~~N--~~~a~~l~v~~ 135 (259)
++| +++++++++..
T Consensus 106 ~~~~~~~~~~~l~v~~ 121 (126)
T 1vj2_A 106 FRNDTDSEVEFLCLIP 121 (126)
T ss_dssp EECCSSSCEEEEEEEE
T ss_pred eEeCCCCCEEEEEEEc
Confidence 999 44788888753
No 41
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.54 E-value=1.9e-14 Score=113.17 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=68.9
Q ss_pred EEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-CCeEEE
Q 025000 52 AYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSATL 130 (259)
Q Consensus 52 ~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~ 130 (259)
..+.+...++.+.+.+++++||+....|. ..+|++|||+|++++++ +|+++.|++||+++||+|.+|+++| ++++++
T Consensus 29 g~v~s~~~~~~~~~~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~-~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~~ 106 (119)
T 3lwc_A 29 GNLVDERHGGPITIGYGRYAPGQSLTETM-AVDDVMIVLEGRLSVST-DGETVTAGPGEIVYMPKGETVTIRSHEEGALT 106 (119)
T ss_dssp EEC------CCCEEEEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEE-TTEEEEECTTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEeecCCCCCCEEEEEEEECCCCCcCccC-CCCEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCEEEEEcCCCCeEE
Confidence 33445555678999999999998777775 88999999999999999 9999999999999999999999999 478999
Q ss_pred EEEEEe
Q 025000 131 VVFERR 136 (259)
Q Consensus 131 l~v~~~ 136 (259)
+++..+
T Consensus 107 l~v~~P 112 (119)
T 3lwc_A 107 AYVTYP 112 (119)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 998654
No 42
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=3.4e-14 Score=111.00 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=65.9
Q ss_pred eEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEe-CCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 179 FNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRL-GDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~-~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
+.+..++++||+.++. |.|. .+|.+|||+|++.+.+ ||+++.+++||++++++|++|++.|.|+++++||+.-
T Consensus 39 ~~~~~~~~~pg~~~~~-H~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 39 SVVVVWHAHPGQEIAS-HVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp CEEEEEEECTTCEECC-C-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred EEEEEEEECCCCcCCc-ccCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 5677899999999997 4555 5788999999999999 9999999999999999999999999999999999763
No 43
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.54 E-value=6.2e-14 Score=118.03 Aligned_cols=86 Identities=16% Similarity=0.278 Sum_probs=74.0
Q ss_pred cceEEEEecCCCCCcEEEEEEEecCCCcCC---CCCCCceEEEEEEECEEEEEEcCC----cEEEEeCCcEEEeCCCCcE
Q 025000 48 NTLGAYLITPAMGSHFVMYLANMQENARSA---LPPHDVERFIFVVQGSAMLTNASG----VSSKLMVDSYTYLPPNFAH 120 (259)
Q Consensus 48 ~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~---~h~~~~Eef~yVl~G~l~v~v~~g----e~~~L~~Gd~i~~p~~~~H 120 (259)
+.....+..+..+..|++++++++||+..+ .|.|.++|++||++|++++.+ ++ +++.|++||+++||++.+|
T Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~-~~~~~~~~~~l~~GD~~~~~~~~~H 180 (198)
T 2bnm_A 102 YYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKW-GDKENPKEALLPTGASMFVEEHVPH 180 (198)
T ss_dssp TEEEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEE-SCTTSCEEEEECTTCEEEECTTCCE
T ss_pred ceEEEeeccCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEE-CCcCCcccEEECCCCEEEeCCCCce
Confidence 345555555555789999999999999775 577888999999999999999 88 9999999999999999999
Q ss_pred EEEeC---CeEEEEEEE
Q 025000 121 SLRAE---GSATLVVFE 134 (259)
Q Consensus 121 ~~~N~---~~a~~l~v~ 134 (259)
+++|. ++++++|+.
T Consensus 181 ~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 181 AFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp EEEESTTSCCEEEEEEE
T ss_pred EEEecCCCCCeEEEEEe
Confidence 99996 578998874
No 44
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.52 E-value=2.6e-13 Score=129.01 Aligned_cols=74 Identities=8% Similarity=0.110 Sum_probs=61.7
Q ss_pred ceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEe---CC-EEE--EccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL---GD-SWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~---~g-~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
++.+..+.|+||+..+. |.|+.. |..||++|++.+.+ +| +.+ .|++||++++|.|.+|... .|+++++||.
T Consensus 322 giS~a~v~l~pGgm~~P-HwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~-ag~e~~~~l~ 399 (465)
T 3qac_A 322 RLSAAKGVLYRNAMMAP-HYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQ-AFEDGFEWVS 399 (465)
T ss_dssp TCEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEE
T ss_pred ceeEEEEEecCCcEeee-EECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEE-cCCCCeEEEE
Confidence 36889999999999986 677655 88999999997654 33 344 4999999999999999875 6899999999
Q ss_pred Eee
Q 025000 251 YKD 253 (259)
Q Consensus 251 ~k~ 253 (259)
+++
T Consensus 400 f~~ 402 (465)
T 3qac_A 400 FKT 402 (465)
T ss_dssp EES
T ss_pred Eec
Confidence 975
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.52 E-value=3.2e-14 Score=113.30 Aligned_cols=92 Identities=21% Similarity=0.288 Sum_probs=81.4
Q ss_pred CCCCcceEEEEecCCCC-CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEE--EcCCcEEEEeCCcEEEeCCCCcE
Q 025000 44 PEWTNTLGAYLITPAMG-SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLT--NASGVSSKLMVDSYTYLPPNFAH 120 (259)
Q Consensus 44 p~~~~~~~~~l~sp~~g-~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~--v~~ge~~~L~~Gd~i~~p~~~~H 120 (259)
++..+...++++++..+ ..+.+..++++||+..+.|.|..+|++||++|++++. + +|+++.|++||++++|+|.+|
T Consensus 19 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-~~~~~~l~~Gd~~~ip~~~~H 97 (145)
T 3ht1_A 19 PGAKETTHRKLIDTPDGADRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPD-QGRTEEVGPGEAIFIPRGEPH 97 (145)
T ss_dssp TTCEEEEEEEEECGGGTCCSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGG-GTEEEEECTTCEEEECTTCCB
T ss_pred CCCCCcEEEEEEccCCCCCcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeE-CCEEEEECCCCEEEECCCCeE
Confidence 45567788889988765 4899999999999998888888889999999999999 9 999999999999999999999
Q ss_pred EEEe--CCeEEEEEEEEe
Q 025000 121 SLRA--EGSATLVVFERR 136 (259)
Q Consensus 121 ~~~N--~~~a~~l~v~~~ 136 (259)
+++| +++++++++..+
T Consensus 98 ~~~~~~~~~~~~l~i~~~ 115 (145)
T 3ht1_A 98 GFVTGPGQTCRFLVVAPC 115 (145)
T ss_dssp EEECCTTCCEEEEEEEES
T ss_pred EeEcCCCCCEEEEEEECC
Confidence 9999 557888888644
No 46
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.52 E-value=8.7e-14 Score=116.80 Aligned_cols=87 Identities=13% Similarity=0.069 Sum_probs=74.1
Q ss_pred cceEEEEecCCCCCcEEEEEEEecCCCcCC--CCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-
Q 025000 48 NTLGAYLITPAMGSHFVMYLANMQENARSA--LPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 124 (259)
Q Consensus 48 ~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~--~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N- 124 (259)
+.....+..+..+..++++.++++||+... .|.|+.+|++||++|++++.+ +|+++.|++||+++||++.+|+++|
T Consensus 89 g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~-~~~~~~l~~GD~i~i~~~~~H~~~n~ 167 (192)
T 1y9q_A 89 NMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF-DEQWHELQQGEHIRFFSDQPHGYAAV 167 (192)
T ss_dssp TEEEEEEEEEETTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE-TTEEEEECTTCEEEEECSSSEEEEES
T ss_pred CEEEEEeccCCCCCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE-CCEEEEeCCCCEEEEcCCCCeEeECC
Confidence 345555665566789999999999998764 566888999999999999999 9999999999999999999999999
Q ss_pred -CCeEEEEEEEEe
Q 025000 125 -EGSATLVVFERR 136 (259)
Q Consensus 125 -~~~a~~l~v~~~ 136 (259)
++++ ++|+..+
T Consensus 168 ~~~~~-~l~v~~~ 179 (192)
T 1y9q_A 168 TEKAV-FQNIVAY 179 (192)
T ss_dssp SSCEE-EEEEEEC
T ss_pred CCCcE-EEEEEec
Confidence 5678 8877643
No 47
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.52 E-value=1.6e-13 Score=115.49 Aligned_cols=89 Identities=16% Similarity=0.231 Sum_probs=78.3
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCc--ceeeccceEEEEEEceEEEEeCC----EEEEccCCcEEEeCCCCce
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNV--KEVHYNQHGLLLLEGQGIYRLGD----SWYPVQAGDVLWMAPFVPQ 236 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~--~~~H~~eh~~~il~G~g~~~~~g----~~~~v~~GD~i~~~~~~~H 236 (259)
+++..+.|.+...+..+.+..++++||+..+. +|+|..+|.+|||+|++.+.++| +++.+++||+++++++.+|
T Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H 180 (198)
T 2bnm_A 101 DYYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPH 180 (198)
T ss_dssp TTEEEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCE
T ss_pred CceEEEeeccCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCce
Confidence 45556667676666778888999999999885 57777789999999999999999 9999999999999999999
Q ss_pred eEEeC-CCccEEEEEE
Q 025000 237 WYAAL-GKTRTRYLLY 251 (259)
Q Consensus 237 ~~~n~-G~e~~~fi~~ 251 (259)
++.|. |++++++|+.
T Consensus 181 ~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 181 AFTAAKGTGSAKLIAV 196 (198)
T ss_dssp EEEESTTSCCEEEEEE
T ss_pred EEEecCCCCCeEEEEE
Confidence 99999 9999999874
No 48
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.52 E-value=1.3e-13 Score=113.84 Aligned_cols=90 Identities=12% Similarity=0.165 Sum_probs=76.5
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeCCEEEEccCCcEEEeCCC--CceeEEeCC
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPF--VPQWYAALG 242 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~--~~H~~~n~G 242 (259)
..+.|.+......+.+.+++++||+.+...|.|.. +|.+|||+|++.+.++|+++.+++||+++++++ ++|++.|.|
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~ 109 (163)
T 3i7d_A 30 SSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRT 109 (163)
T ss_dssp EEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCBEEECCS
T ss_pred EEEEcccCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCEEEEeCCCCEEEECCCCCcceEEEECC
Confidence 44445565556678899999999997743466665 799999999999999999999999999999999 999999999
Q ss_pred CccEEEEEEeecC
Q 025000 243 KTRTRYLLYKDVN 255 (259)
Q Consensus 243 ~e~~~fi~~k~~n 255 (259)
+++++||+...-.
T Consensus 110 ~~~~~~l~v~~p~ 122 (163)
T 3i7d_A 110 DAPATFLVVGTRT 122 (163)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCEEEEEEECCC
Confidence 9999999876433
No 49
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.52 E-value=7.4e-14 Score=114.29 Aligned_cols=82 Identities=18% Similarity=0.356 Sum_probs=71.7
Q ss_pred CCCCCcceEEEEEEecCCc-ccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCC-CceeEEeCCCccEEEE
Q 025000 172 PQAVPFDFNIHIMDFQPGD-FLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPF-VPQWYAALGKTRTRYL 249 (259)
Q Consensus 172 p~~~~~~~~~~~~t~~PG~-~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~-~~H~~~n~G~e~~~fi 249 (259)
+......+.+..++++||+ ..+.|.|+..+|.+|||+|++.+.++|+++.+++||+++++++ ++|++.|.|+++++||
T Consensus 39 ~~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l 118 (162)
T 3l2h_A 39 DAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCL 118 (162)
T ss_dssp HHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEE
T ss_pred CCCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEE
Confidence 3334457888999999999 5887544478899999999999999999999999999999998 9999999999999998
Q ss_pred EEee
Q 025000 250 LYKD 253 (259)
Q Consensus 250 ~~k~ 253 (259)
+...
T Consensus 119 ~v~~ 122 (162)
T 3l2h_A 119 VIGQ 122 (162)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 8754
No 50
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.51 E-value=8.8e-14 Score=115.49 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=79.2
Q ss_pred CCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-
Q 025000 46 WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 124 (259)
Q Consensus 46 ~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N- 124 (259)
+.+...++|+++.. ..|.+.+++++||+..+.|.|..+|++||++|++++.+ +|+++.|++||++++|++++|+++|
T Consensus 37 ~~gv~~r~L~~~~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v-~g~~~~l~~GD~i~ip~g~~H~~~n~ 114 (166)
T 3jzv_A 37 FRSVTRQVLFSGNG-LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMV-GRAVSAVAPYDLVTIPGWSWHQFRAP 114 (166)
T ss_dssp CEEEEEEEEECCTT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEE-TTEEEEECTTCEEEECTTCCEEEECC
T ss_pred cCCeEEEEEECCCC-CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEeC
Confidence 45677788887764 68999999999999988888888999999999999999 9999999999999999999999999
Q ss_pred -CCeEEEEEEEEe
Q 025000 125 -EGSATLVVFERR 136 (259)
Q Consensus 125 -~~~a~~l~v~~~ 136 (259)
+++++++++...
T Consensus 115 ~~~~~~~l~i~~~ 127 (166)
T 3jzv_A 115 ADEALGFLCMVNA 127 (166)
T ss_dssp TTSCEEEEEEEES
T ss_pred CCCCEEEEEEEcc
Confidence 568888888644
No 51
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.51 E-value=1.6e-13 Score=111.22 Aligned_cols=97 Identities=20% Similarity=0.232 Sum_probs=81.8
Q ss_pred CCCCcccCCceEEEEEeeCCCC-CcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEE-EEccCCcEEEeC
Q 025000 154 KQPLLETPGEVFQLRKLLPQAV-PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW-YPVQAGDVLWMA 231 (259)
Q Consensus 154 di~~~~~~g~~~~~~~l~p~~~-~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~-~~v~~GD~i~~~ 231 (259)
+.|.....| ++..+.|.+.+. ...+.+..++++||..++. |.|...|.+|||+|++.+.++|+. +.+++||+++++
T Consensus 23 ~~~~~~~~g-~~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip 100 (147)
T 2f4p_A 23 KGSSDFFTG-NVWVKMLVTDENGVFNTQVYDVVFEPGARTHW-HSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIP 100 (147)
T ss_dssp ECCTTTEES-CEEEEEEECCTTCSSSCEEEEEEECTTCEECS-EECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEEEC
T ss_pred CCCcCEEEC-cEEEEEEECCCCCCCcEEEEEEEECCCCccCc-eECCCceEEEEEeCEEEEEECCEEEEEECCCCEEEEC
Confidence 344444444 456777777554 5678888999999999986 788888999999999999999998 999999999999
Q ss_pred CCCceeEEeCCCccEEEEEEe
Q 025000 232 PFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 232 ~~~~H~~~n~G~e~~~fi~~k 252 (259)
++++|++.|.|++++++|+.-
T Consensus 101 ~~~~H~~~n~~~~~~~~l~v~ 121 (147)
T 2f4p_A 101 PNVVHWHGAAPDEELVHIGIS 121 (147)
T ss_dssp TTCCEEEEEBTTBCEEEEEEE
T ss_pred CCCcEEeEeCCCCCEEEEEEE
Confidence 999999999999999998764
No 52
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.50 E-value=6.5e-14 Score=108.73 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=66.9
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF 133 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v 133 (259)
+.++++.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||++++|++.+|+++|.++++++++
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV-DGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEE-TTEEEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEE-CCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 347999999999999888888888999999999999999 9999999999999999999999999777776664
No 53
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.50 E-value=7e-13 Score=126.90 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=60.9
Q ss_pred ceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeC---C-EEE--EccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLG---D-SWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~---g-~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+++..+.|.||+..+. |.|. ..|..||++|++.+.+= | +.+ .|++||++++|.|.+|...| ++++++||+
T Consensus 357 giS~a~v~L~pGgm~~P-HwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a-~~e~~~~l~ 434 (496)
T 3ksc_A 357 KLSAEHGSLHKNAMFVP-HYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKS-LSDRFSYVA 434 (496)
T ss_dssp TCEEEEEEEETTCEEEE-EEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEE
T ss_pred ceeEEEEEeeCCeEECC-eeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEe-CCCCEEEEE
Confidence 36889999999999987 5554 45889999999987542 2 444 49999999999999997766 589999999
Q ss_pred Eee
Q 025000 251 YKD 253 (259)
Q Consensus 251 ~k~ 253 (259)
+++
T Consensus 435 f~~ 437 (496)
T 3ksc_A 435 FKT 437 (496)
T ss_dssp EES
T ss_pred EEC
Confidence 985
No 54
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.49 E-value=3.3e-13 Score=105.58 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=74.6
Q ss_pred EEEEEeeCC-CCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 165 FQLRKLLPQ-AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 165 ~~~~~l~p~-~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
+..+.+.|. +....+.+...+++||...+. |.|...|.+||++|++.+.+||+.+.+++||++++++|+.|++.|.|+
T Consensus 19 ~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~Ei~~v~~G~~~~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~ 97 (128)
T 4i4a_A 19 LDGSRLLPWEGLNTPFGGAWCIVRPETKSFR-HSHNEYELFIVIQGNAIIRINDEDFPVTKGDLIIIPLDSEHHVINNNQ 97 (128)
T ss_dssp EEEEECCCCTTCCCSSEEEEEEECTTEECCC-BCCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECSS
T ss_pred CceEeecCccccCCCcEEEEEEECCCCccCC-EecCCeEEEEEEeCEEEEEECCEEEEECCCcEEEECCCCcEEeEeCCC
Confidence 344556653 445677888999999999986 677888999999999999999999999999999999999999999999
Q ss_pred ccEEEEEE
Q 025000 244 TRTRYLLY 251 (259)
Q Consensus 244 e~~~fi~~ 251 (259)
++++|++.
T Consensus 98 ~~~~~~~i 105 (128)
T 4i4a_A 98 EDFHFYTI 105 (128)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 99998764
No 55
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.49 E-value=1.5e-13 Score=102.53 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=71.7
Q ss_pred eEEEEEeeCCCCCcceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCC
Q 025000 164 VFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 164 ~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
++..+.+.+ ...+.+..++++||..++. |.|. .+|.+||++|++.+.++|+.+.+++||++++++|++|++.|.|
T Consensus 16 ~~~~~~~~~---~~~~~~~~~~~~pg~~~~~-H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~ 91 (105)
T 1v70_A 16 KMAKIPVFQ---SERMLYDLYALLPGQAQKV-HVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNES 91 (105)
T ss_dssp SCEEEEEEE---ETTEEEEEEEECTTCEEEE-ECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCS
T ss_pred ccccceecC---CCceEEEEEEECCCCcCCc-cCCCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCC
Confidence 334455543 2246777899999999986 5665 4689999999999999999999999999999999999999999
Q ss_pred CccEEEEEEe
Q 025000 243 KTRTRYLLYK 252 (259)
Q Consensus 243 ~e~~~fi~~k 252 (259)
++++++++.-
T Consensus 92 ~~~~~~~~v~ 101 (105)
T 1v70_A 92 ASPALLLVVT 101 (105)
T ss_dssp SSCEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999998764
No 56
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.49 E-value=1.6e-13 Score=107.77 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=70.1
Q ss_pred CceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeC
Q 025000 162 GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 162 g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
++.+++..+...+....+.+..++++||+.++.| ...+|.+|||+|++.+.+||+.+.+++||++++++|++|++.|.
T Consensus 23 ~~~~~~g~v~s~~~~~~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~ 100 (119)
T 3lwc_A 23 EADISVGNLVDERHGGPITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSH 100 (119)
T ss_dssp EEEEEEEEC------CCCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEE
T ss_pred CCCEEEEEeecCCCCCCEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCEEEEEcC
Confidence 4777888877666667788889999999998763 37779999999999999999999999999999999999999998
Q ss_pred CCccEEEEE
Q 025000 242 GKTRTRYLL 250 (259)
Q Consensus 242 G~e~~~fi~ 250 (259)
+ +++++|+
T Consensus 101 ~-~~~~~l~ 108 (119)
T 3lwc_A 101 E-EGALTAY 108 (119)
T ss_dssp E-EEEEEEE
T ss_pred C-CCeEEEE
Confidence 6 6666665
No 57
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.48 E-value=1.5e-13 Score=113.41 Aligned_cols=86 Identities=21% Similarity=0.329 Sum_probs=74.2
Q ss_pred eEEEEecCCCC-CcEEEEEEEecCCCcC-CCCCCCc-eEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCC--CcEEEEe
Q 025000 50 LGAYLITPAMG-SHFVMYLANMQENARS-ALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA 124 (259)
Q Consensus 50 ~~~~l~sp~~g-~~f~~~~~~l~Pg~~~-~~h~~~~-Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~--~~H~~~N 124 (259)
..+.++++..+ ..|++++++++||+.. +.|.|.. ||++|||+|++++++ +++++.|++||+++||++ ++|+++|
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~-~~~~~~l~~GD~i~ip~~~~~~H~~~n 107 (163)
T 3i7d_A 29 RSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD-DQGEHPMVPGDCAAFPAGDPNGHQFVN 107 (163)
T ss_dssp EEEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTCCCCBEEEC
T ss_pred eEEEEcccCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE-CCEEEEeCCCCEEEECCCCCcceEEEE
Confidence 44566666654 5899999999999966 5776665 799999999999999 999999999999999999 9999999
Q ss_pred --CCeEEEEEEEEe
Q 025000 125 --EGSATLVVFERR 136 (259)
Q Consensus 125 --~~~a~~l~v~~~ 136 (259)
+++++++++..+
T Consensus 108 ~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 108 RTDAPATFLVVGTR 121 (163)
T ss_dssp CSSSCEEEEEEEEC
T ss_pred CCCCCEEEEEEECC
Confidence 668999998654
No 58
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.48 E-value=1.9e-13 Score=106.13 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=69.0
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeec
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 254 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~ 254 (259)
.+.+..++++||..++. |.|..+|.+|||+|++.+.+||+++.+++||++|++++++|++.|.++..+..++.++-
T Consensus 35 ~~~v~~~~l~~G~~~~~-H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGS-HSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp TEEEEEEEECTTCEEEE-ECCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred CEEEEEEEECCCCccCc-eeCCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 46778999999999997 78888899999999999999999999999999999999999999999888888777653
No 59
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.48 E-value=2.3e-13 Score=106.26 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=77.4
Q ss_pred cCCCCCCcccCC-ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEE
Q 025000 151 STDKQPLLETPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLW 229 (259)
Q Consensus 151 ~~~di~~~~~~g-~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~ 229 (259)
.++++++..... .++..+.+. +..+.+..++++||..++. |.|..+|.+|||+|++.+.++|+.+.+++||+++
T Consensus 16 ~~~~~~~~~~~~~~G~~~~~~~----~~~~~~~~~~~~pg~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ 90 (126)
T 4e2g_A 16 FYDLTEVRSFSPLPGFAMQAIQ----GKNLMLNWVRIEPNTEMPA-HEHPHEQAGVMLEGTLELTIGEETRVLRPGMAYT 90 (126)
T ss_dssp EEEGGGSCCBCSSTTEEEEEEE----CSSCEEEEEEECTTCEEEE-ECCSSEEEEEEEEECEEEEETTEEEEECTTEEEE
T ss_pred hhhcccceecccCCCeEEEEEe----CCCeEEEEEEECCCCcCCC-ccCCCceEEEEEEeEEEEEECCEEEEeCCCCEEE
Confidence 355666666532 344445542 2357788999999999986 6788889999999999999999999999999999
Q ss_pred eCCCCceeEEeCCCccEEEEEEe
Q 025000 230 MAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 230 ~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
++++++|++.|.|+ ++++|..-
T Consensus 91 ip~~~~H~~~~~~~-~~~~l~v~ 112 (126)
T 4e2g_A 91 IPGGVRHRARTFED-GCLVLDIF 112 (126)
T ss_dssp ECTTCCEEEECCTT-CEEEEEEE
T ss_pred ECCCCcEEeEECCC-CEEEEEEE
Confidence 99999999999988 77777543
No 60
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.48 E-value=2.5e-13 Score=104.34 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=73.2
Q ss_pred cceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCe
Q 025000 48 NTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGS 127 (259)
Q Consensus 48 ~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~ 127 (259)
+...+.|... .++.+.+++++||+..+.|.|..+|++||++|++++.+ +|+++.|++||++++|++.+|+++|.++
T Consensus 22 g~~~~~l~~~---~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~ 97 (116)
T 2pfw_A 22 GLKRQMLGFN---HELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV-DGVIKVLTAGDSFFVPPHVDHGAVCPTG 97 (116)
T ss_dssp TEEEEEEEEE---TTEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE-TTEEEEECTTCEEEECTTCCEEEEESSC
T ss_pred CeEEEEEecC---CceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE-CCEEEEeCCCCEEEECcCCceeeEeCCC
Confidence 4455555533 35899999999998877788889999999999999999 9999999999999999999999999778
Q ss_pred EEEEEEEEe
Q 025000 128 ATLVVFERR 136 (259)
Q Consensus 128 a~~l~v~~~ 136 (259)
++++++..+
T Consensus 98 ~~~l~v~~p 106 (116)
T 2pfw_A 98 GILIDTFSP 106 (116)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEECC
Confidence 998888543
No 61
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.48 E-value=1e-13 Score=111.09 Aligned_cols=81 Identities=6% Similarity=0.078 Sum_probs=68.5
Q ss_pred EEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEE
Q 025000 51 GAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATL 130 (259)
Q Consensus 51 ~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~ 130 (259)
...|.++..+ .+++.+++++|| .... ++..+|++|||+|++++++ +|+++.|++||+++||+|.+|+|+|++++++
T Consensus 46 ~~~L~~~~~~-~~~~~~~~~~pG-~~~~-h~~~~E~~~VLeG~~~l~~-~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~ 121 (133)
T 2pyt_A 46 TDLVTEQDGS-SMAAGFMQWDNA-FFPW-TLNYDEIDMVLEGELHVRH-EGETMIAKAGDVMFIPKGSSIEFGTPTSVRF 121 (133)
T ss_dssp EEEECGGGTC-SSEEEEEEEEEE-EEEE-ECSSEEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEEecCCCC-cEEEEEEEECCC-Cccc-cCCCCEEEEEEECEEEEEE-CCEEEEECCCcEEEECCCCEEEEEeCCCEEE
Confidence 3445555444 899999999999 3223 3468999999999999999 9999999999999999999999999889999
Q ss_pred EEEEE
Q 025000 131 VVFER 135 (259)
Q Consensus 131 l~v~~ 135 (259)
+++..
T Consensus 122 l~v~~ 126 (133)
T 2pyt_A 122 LYVAW 126 (133)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99864
No 62
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.48 E-value=2e-13 Score=103.77 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=68.4
Q ss_pred cceEEEEEEecCCcccCcc-eeec-cceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 177 FDFNIHIMDFQPGDFLNVK-EVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~-~~H~-~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
..+.+..++++||..++.| |.|. .+|.+|||+|++.+.++|+++.+++||+++++++++|++.|.|++++++++.-
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~ 96 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFY 96 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 3567889999999998874 2666 78999999999999999999999999999999999999999999999998763
No 63
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.48 E-value=1.5e-13 Score=106.20 Aligned_cols=76 Identities=12% Similarity=0.197 Sum_probs=69.1
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEE-EccCCcEEEeCCCCceeEEeCCCccEEEEEEeec
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWY-PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 254 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~-~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~ 254 (259)
.+.+..++++||..++. |.|...|.+|||+|++.+.++|+.+ .+++||++|+++|++|++.|.|+++++|++.+--
T Consensus 26 ~~~~~~~~~~pg~~~~~-H~H~~~e~~~Vl~G~~~~~i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~ 102 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPK-HYSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAP 102 (117)
T ss_dssp SCEEEEEEEETTCBCCC-EECSSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECS
T ss_pred ceEEEEEEECCCCcCCC-EeCCCcEEEEEEeCEEEEEECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 35567889999999986 7788889999999999999999999 9999999999999999999999999999988543
No 64
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.47 E-value=2.3e-12 Score=121.23 Aligned_cols=192 Identities=14% Similarity=0.118 Sum_probs=127.8
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEc---CCcEEEEeCCcEEEeCCCCcEEEEe-CC--eEEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA---SGVSSKLMVDSYTYLPPNFAHSLRA-EG--SATLVVFE 134 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~---~ge~~~L~~Gd~i~~p~~~~H~~~N-~~--~a~~l~v~ 134 (259)
+.+.+.+++++|++-..+|+.+.+|++||++|++.+.+. +.+++.|++||.++||+|..|.+.| ++ ...++.+.
T Consensus 42 ~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~ 121 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKIS 121 (418)
T ss_dssp TTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEee
Confidence 567788999999988877766899999999999998872 2347899999999999999999999 32 34444332
Q ss_pred Eecc-c-------cCCC-CcceeeccCC----------------------------------------------------
Q 025000 135 RRYA-S-------LENH-ITEQIVGSTD---------------------------------------------------- 153 (259)
Q Consensus 135 ~~y~-p-------~~g~-~p~~~v~~~~---------------------------------------------------- 153 (259)
..-. | +.|. .+..+.+..+
T Consensus 122 ~~s~~pg~~~~f~laG~~~~~s~~~gf~~evLa~af~v~~~~v~kl~~~~~~~~~~~~~~~~~~~~~~~~q~~g~Iv~~~ 201 (418)
T 3s7i_A 122 MPVNTPGQFEDFFPASSRDQSSYLQGFSRNTLEAAFNAEFNEIRRVLLEENAGGEQEERGQRRWSTRSSENNEGVIVKVS 201 (418)
T ss_dssp EESSBTTBCCEECSSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCC--------------------CCCSEEECC
T ss_pred cCcCCCCccceeeccCCcchhHHhhcCCHHHHHHHHCcCHHHHHhhhcccccccccccccccccccccccccCCceEEcC
Confidence 1110 1 0000 0000000000
Q ss_pred -----------------CCCCc-------------c-c--CCceEEEEEeeCCCC-C----cceEEEEEEecCCcccCcc
Q 025000 154 -----------------KQPLL-------------E-T--PGEVFQLRKLLPQAV-P----FDFNIHIMDFQPGDFLNVK 195 (259)
Q Consensus 154 -----------------di~~~-------------~-~--~g~~~~~~~l~p~~~-~----~~~~~~~~t~~PG~~~~~~ 195 (259)
.++.. + + .+|. +..+.+.+. . ..+.+.+++|+||+-.+.
T Consensus 202 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~nl~~~~p~~~n~~G~--~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~P- 278 (418)
T 3s7i_A 202 KEHVEELTKHAKSVSKKGSEEEGDITNPINLREGEPDLSNNFGK--LFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLP- 278 (418)
T ss_dssp HHHHHHHHTTCBC--------CTTCCCCEETTCSCCSEEETTEE--EEEECSBTTBHHHHHHTCEEEEEEECTTEEEEE-
T ss_pred hhhhhhccccccccCCCCcCcccCCCcccccccCCCceeCCCCe--EEEechHHcchhhccCCeeEEEEEecCCceeCc-
Confidence 00000 0 0 1122 222333333 1 247899999999999986
Q ss_pred eeec-cceEEEEEEceEEEEe---CC--------------------------E-EEEccCCcEEEeCCCCceeEEeCCCc
Q 025000 196 EVHY-NQHGLLLLEGQGIYRL---GD--------------------------S-WYPVQAGDVLWMAPFVPQWYAALGKT 244 (259)
Q Consensus 196 ~~H~-~eh~~~il~G~g~~~~---~g--------------------------~-~~~v~~GD~i~~~~~~~H~~~n~G~e 244 (259)
|.|+ ..+..||++|+|.+.+ ++ . ...+++||++++|.|.+|+..|.+
T Consensus 279 H~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~-- 356 (418)
T 3s7i_A 279 HFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS-- 356 (418)
T ss_dssp EEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--
T ss_pred eecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--
Confidence 6764 4588999999996643 32 1 477899999999999999999865
Q ss_pred cEEEEEEeecCCC
Q 025000 245 RTRYLLYKDVNRN 257 (259)
Q Consensus 245 ~~~fi~~k~~nr~ 257 (259)
+++|++|+.-++.
T Consensus 357 ~l~~v~f~~~~~~ 369 (418)
T 3s7i_A 357 ELHLLGFGINAEN 369 (418)
T ss_dssp CEEEEEEEESCTT
T ss_pred CEEEEEEEcCCCC
Confidence 5999999755543
No 65
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.47 E-value=2.5e-13 Score=108.03 Aligned_cols=84 Identities=11% Similarity=0.199 Sum_probs=72.3
Q ss_pred EEEEecCC-C-CCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--C
Q 025000 51 GAYLITPA-M-GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--E 125 (259)
Q Consensus 51 ~~~l~sp~-~-g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~ 125 (259)
.+.+++|. . +..+++.+++++||+..+.|.|. .+|++||++|++++++ +++++.|++||++++|++.+|+++| +
T Consensus 43 ~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 43 MAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD-NGKDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE-TTEEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEEccChhhCCCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE-CCEEEEeCCCcEEEECCCCcEEeEECCC
Confidence 33477775 3 45678889999999887777775 6999999999999999 9999999999999999999999999 4
Q ss_pred CeEEEEEEEE
Q 025000 126 GSATLVVFER 135 (259)
Q Consensus 126 ~~a~~l~v~~ 135 (259)
++++++|+..
T Consensus 122 ~~~~~l~v~~ 131 (133)
T 1o4t_A 122 TDLEFLAVII 131 (133)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 5899988753
No 66
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.47 E-value=1.7e-12 Score=124.59 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=63.6
Q ss_pred ceEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeC---CE---EEEccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLG---DS---WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~---g~---~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
++.+..++|+||+..+. |.|.. .|.+|||+|++.+.+- |. ...|++||++++|.|.+|.. +.|++++.|++
T Consensus 393 giS~a~v~L~pGgm~~P-HwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~-~ag~e~l~fla 470 (531)
T 3fz3_A 393 RLSAERGFFYRNGIYSP-HWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQ-QAGNQGFEYFA 470 (531)
T ss_dssp TCEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE-EEEEEEEEEEE
T ss_pred ceeEEEEEeecCccccc-eEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEE-ecCCCCEEEEE
Confidence 57889999999999986 67764 6899999999998773 32 57899999999999999954 56799999999
Q ss_pred Eee
Q 025000 251 YKD 253 (259)
Q Consensus 251 ~k~ 253 (259)
|++
T Consensus 471 F~s 473 (531)
T 3fz3_A 471 FKT 473 (531)
T ss_dssp EES
T ss_pred Eec
Confidence 986
No 67
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.47 E-value=2.5e-13 Score=121.36 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=76.7
Q ss_pred ceEEEEEeeCC--CCCcceEEEEEEecCCccc-CcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEE
Q 025000 163 EVFQLRKLLPQ--AVPFDFNIHIMDFQPGDFL-NVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYA 239 (259)
Q Consensus 163 ~~~~~~~l~p~--~~~~~~~~~~~t~~PG~~~-~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~ 239 (259)
++.....|... ..+..+.+.+++++||+.. ..+|+|..+|.+|||+|++.+.++|+++.+++||+++++++++|+++
T Consensus 50 ~~~~~~~L~~p~~~~~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~~~~L~~GD~i~ip~~~~H~~~ 129 (278)
T 1sq4_A 50 DNMRMWVIARPLSGFAETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGADYKVR 129 (278)
T ss_dssp EEEEEEEECCCSSSSCCSCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCCEEEE
T ss_pred cCcEEEEEecCCCCCCCcEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEEE
Confidence 44455556533 3456778889999999988 23466788899999999999999999999999999999999999999
Q ss_pred eCCCccEEEEEEee
Q 025000 240 ALGKTRTRYLLYKD 253 (259)
Q Consensus 240 n~G~e~~~fi~~k~ 253 (259)
|.|+++++||+...
T Consensus 130 N~g~~~~~~l~v~~ 143 (278)
T 1sq4_A 130 NTTGQHTRFHWIRK 143 (278)
T ss_dssp CCSSSCEEEEEEEE
T ss_pred ECCCCCEEEEEEEe
Confidence 99999999998753
No 68
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.47 E-value=4.9e-14 Score=107.21 Aligned_cols=72 Identities=10% Similarity=0.048 Sum_probs=61.6
Q ss_pred ceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEe-CCE--EEEccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL-GDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~-~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+.+..++|+||+.++. |.|.++ ..+++++|++.+.. ||+ +.++++||++|+++|.+|++.|.|++|++||+
T Consensus 16 ~v~v~~~~l~PG~~~~~-H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGH-HTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCS-EECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCc-EeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 56778999999999997 666666 34456899999987 665 68999999999999999999999999999998
No 69
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.47 E-value=3e-13 Score=110.61 Aligned_cols=84 Identities=19% Similarity=0.281 Sum_probs=73.3
Q ss_pred EEEecCCCC-CcEEEEEEEecCCCc-CCCCCC-CceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCC-CcEEEEe--C
Q 025000 52 AYLITPAMG-SHFVMYLANMQENAR-SALPPH-DVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN-FAHSLRA--E 125 (259)
Q Consensus 52 ~~l~sp~~g-~~f~~~~~~l~Pg~~-~~~h~~-~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~-~~H~~~N--~ 125 (259)
...+++..| ..|++++++++||+. .+.|.| ..+|++||++|++++++ +|+++.|++||+++||++ .+|+++| +
T Consensus 34 ~~~l~~~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~-~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 34 NKSLGDAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM-ENDQYPIAPGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp EEEHHHHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTSCCEEEECCSS
T ss_pred EEEccCCCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE-CCEEEEeCCCCEEEECCCCceEEeEeCCC
Confidence 445555555 589999999999994 677866 78999999999999999 999999999999999998 9999999 6
Q ss_pred CeEEEEEEEEe
Q 025000 126 GSATLVVFERR 136 (259)
Q Consensus 126 ~~a~~l~v~~~ 136 (259)
++++++++..+
T Consensus 113 ~~~~~l~v~~p 123 (162)
T 3l2h_A 113 ETLVCLVIGQR 123 (162)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEEEECC
Confidence 68999998765
No 70
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.46 E-value=5.5e-13 Score=118.58 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=77.4
Q ss_pred CcceEEEEecCCCCCcEEEEEEEecCCCcCCC-CCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-
Q 025000 47 TNTLGAYLITPAMGSHFVMYLANMQENARSAL-PPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 124 (259)
Q Consensus 47 ~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~-h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N- 124 (259)
.+...+.|..+..+..|++++++++||+..+. |.|..+|++||++|++++.+ +|+++.|++||+++||++.+|+++|
T Consensus 166 ~g~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i-~~~~~~l~~GD~i~i~~~~~H~~~n~ 244 (274)
T 1sef_A 166 TDVLLWSLLPKEFDFDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL-DNEWYPVEKGDYIFMSAYVPQAAYAV 244 (274)
T ss_dssp TTEEEEECSCSSTTCSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE-TTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred CCeEEEEeCCcccCCCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCCEEEEeC
Confidence 45566666666667899999999999998877 88889999999999999999 9999999999999999999999999
Q ss_pred -C-CeEEEEEEEE
Q 025000 125 -E-GSATLVVFER 135 (259)
Q Consensus 125 -~-~~a~~l~v~~ 135 (259)
+ ++++++++..
T Consensus 245 ~~~~~~~~l~~~~ 257 (274)
T 1sef_A 245 GREEPLMYVYSKD 257 (274)
T ss_dssp CSSSCEEEEEEEE
T ss_pred CCCCCEEEEEEEc
Confidence 4 6788888743
No 71
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.46 E-value=3e-13 Score=100.88 Aligned_cols=75 Identities=13% Similarity=0.268 Sum_probs=67.1
Q ss_pred CCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFER 135 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~ 135 (259)
+..+.+.+++++||+..+.|.|. .+|++||++|++++.+ +++++.|++||++++|+|.+|+++| +++++++++..
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~ 102 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV-GEEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA 102 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeC
Confidence 45788999999999888888776 5899999999999999 9999999999999999999999999 45789888854
No 72
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.46 E-value=2.4e-13 Score=106.40 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=66.1
Q ss_pred CcceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 176 PFDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 176 ~~~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
...+.+.+++++||..++..|.|... +.+||++|++.+.+||+.+.+++||+++++++++|++.|.|+++++|++.-
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~ 100 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQ 100 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEE
Confidence 34566778999999999833666654 556699999999999999999999999999999999999999999988653
No 73
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.46 E-value=4.2e-14 Score=107.39 Aligned_cols=73 Identities=11% Similarity=0.047 Sum_probs=62.6
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC---EEEEccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD---SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g---~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+-+.+++|+||+.++.|.|+..++.++|++|++.+.+++ ++.++++||.+|++.|..|.+.|.|++||+||-
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 3567789999999999855545557788899999999987 567799999999999999999999999999985
No 74
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.46 E-value=2.8e-13 Score=120.42 Aligned_cols=99 Identities=8% Similarity=0.067 Sum_probs=83.3
Q ss_pred CCCCCcccCC-ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEe
Q 025000 153 DKQPLLETPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWM 230 (259)
Q Consensus 153 ~di~~~~~~g-~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~ 230 (259)
+++-....+| +++.++.|+....+..|.+.+++++||+..+. ++|..||.+|||+|+..+.++ |+++.+++||++|+
T Consensus 43 ~~iv~s~lPg~~~~~~~vL~sP~~G~~f~~~lv~l~PGg~s~~-~~h~~EEfiyVleG~l~l~l~~g~~~~L~~Gds~y~ 121 (266)
T 4e2q_A 43 ESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSGL-PPQDIERLIFVVEGAVTLTNTSSSSKKLTVDSYAYL 121 (266)
T ss_dssp GGCCCEECTTSSSEEEEEEECGGGTCSSEEEEEEECSSEECCC-CCTTEEEEEEEEEECEEEEC--CCCEEECTTEEEEE
T ss_pred cceEEeeCCCCcCEEEEEEcCCCCCCcEEEEEEEECcCCcCCC-CCCCCeEEEEEEEEEEEEEECCCcEEEEcCCCEEEE
Confidence 4555555566 66677778754446778889999999999986 688999999999999999999 99999999999999
Q ss_pred CCCCceeEEeCCCccEEEEEEeec
Q 025000 231 APFVPQWYAALGKTRTRYLLYKDV 254 (259)
Q Consensus 231 ~~~~~H~~~n~G~e~~~fi~~k~~ 254 (259)
+++++|+++|. +++++++++-.
T Consensus 122 p~~~~H~~~N~--~~Ar~l~V~k~ 143 (266)
T 4e2q_A 122 PPNFHHSLDCV--ESATLVVFERR 143 (266)
T ss_dssp CTTCCCEEEES--SCEEEEEEEEE
T ss_pred CCCCCEEEEeC--CCEEEEEEEeE
Confidence 99999999995 78999998643
No 75
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.46 E-value=5.8e-13 Score=102.40 Aligned_cols=73 Identities=12% Similarity=0.210 Sum_probs=66.2
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~ 135 (259)
.+.+.++.++||...+.|.|..+|++||++|++++.+ +|+++.|++||++++|++.+|+++|.++++++++..
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i-~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i~~ 109 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITF-DDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQITL 109 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE-TTEEEEECTTCEEEECTTCCBEEEEEEEEEEEEEEE
T ss_pred CceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEE-CCEEEEecCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 4667788889998888888889999999999999999 999999999999999999999999977888888764
No 76
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.46 E-value=3.9e-13 Score=118.62 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=76.9
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceee-ccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeC
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVH-YNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H-~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
++...+.|.+...+..+.+..++++||+..+.+++| ..||.+|||+|++.++++|+++.+++||+++++++.+|+++|.
T Consensus 43 ~~~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~Gd~~~~~~~~~H~~~N~ 122 (261)
T 1rc6_A 43 ENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNA 122 (261)
T ss_dssp EEEEEEECCCGGGTCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCCCEEEEC
T ss_pred CCcEEEEEeCCCCCCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeC
Confidence 445566676544455666779999999988765444 5778999999999999999999999999999999999999999
Q ss_pred CCccEEEEEEee
Q 025000 242 GKTRTRYLLYKD 253 (259)
Q Consensus 242 G~e~~~fi~~k~ 253 (259)
|+++++||+.+-
T Consensus 123 ~~~~~~~l~v~~ 134 (261)
T 1rc6_A 123 QAEDSQIFLYKR 134 (261)
T ss_dssp SSSCEEEEEEEE
T ss_pred CCCCEEEEEEEe
Confidence 999999998763
No 77
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.45 E-value=3.6e-13 Score=113.02 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=75.2
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCc-ceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeC
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNV-KEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~-~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
+++..+.|.+......+.+..++++||+..+. .|+|..+|.+|||+|++.+.++|+++.+++||+++++++.+|++.|.
T Consensus 88 ~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~ 167 (192)
T 1y9q_A 88 LNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAV 167 (192)
T ss_dssp TTEEEEEEEEEETTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEES
T ss_pred CCEEEEEeccCCCCCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEeECC
Confidence 45566667666556677788899999998763 35677789999999999999999999999999999999999999999
Q ss_pred CCccEEEEEE
Q 025000 242 GKTRTRYLLY 251 (259)
Q Consensus 242 G~e~~~fi~~ 251 (259)
|++++ +|+.
T Consensus 168 ~~~~~-~l~v 176 (192)
T 1y9q_A 168 TEKAV-FQNI 176 (192)
T ss_dssp SSCEE-EEEE
T ss_pred CCCcE-EEEE
Confidence 99998 7654
No 78
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.45 E-value=3.9e-13 Score=112.54 Aligned_cols=78 Identities=21% Similarity=0.228 Sum_probs=70.4
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC----CEEEEccCCcEEEeCCCCceeEEeCCCc-cEEEEEE
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG----DSWYPVQAGDVLWMAPFVPQWYAALGKT-RTRYLLY 251 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~----g~~~~v~~GD~i~~~~~~~H~~~n~G~e-~~~fi~~ 251 (259)
..+.+.+++++||+..+.| ||..+|.+|||+|++.+.+. ++.+.+++||++++|+|.+|++.|+|++ ++++++.
T Consensus 39 ~~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 39 RDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp TTEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 3588999999999999875 77788999999999999996 8999999999999999999999999996 8999988
Q ss_pred eecC
Q 025000 252 KDVN 255 (259)
Q Consensus 252 k~~n 255 (259)
.+.+
T Consensus 118 ~~~~ 121 (178)
T 1dgw_A 118 AITF 121 (178)
T ss_dssp EECC
T ss_pred ECCC
Confidence 6544
No 79
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.45 E-value=6.7e-13 Score=100.77 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=67.5
Q ss_pred CCcEEEEEEEecCCCcCCCC--CCC-ceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALP--PHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 134 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h--~~~-~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~ 134 (259)
+..+++++++++||+..+.| .|. .+|++||++|++++++ +++++.|++||++++|++.+|+++| +++++++++.
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~ 96 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV-DGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFY 96 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE-TTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 35789999999999887766 777 8999999999999999 9999999999999999999999999 4578888875
Q ss_pred Ee
Q 025000 135 RR 136 (259)
Q Consensus 135 ~~ 136 (259)
.+
T Consensus 97 ~~ 98 (113)
T 2gu9_A 97 HP 98 (113)
T ss_dssp ES
T ss_pred CC
Confidence 43
No 80
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.44 E-value=1.8e-12 Score=99.57 Aligned_cols=96 Identities=14% Similarity=0.088 Sum_probs=78.0
Q ss_pred eccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEE
Q 025000 149 VGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVL 228 (259)
Q Consensus 149 v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i 228 (259)
+...+++++.+... ++..+.|.+.+ .+.+..++++||..++. |.|..+|.+|||+|++.+.++|+.+.+++||++
T Consensus 8 ~~~~~~~~~~~~~~-g~~~~~l~~~~---~~~~~~~~~~pg~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~ 82 (116)
T 2pfw_A 8 FSFGEQTEIEDIGG-GLKRQMLGFNH---ELMAVKIWFDKGAEGYV-HAHRHSQVSYVVEGEFHVNVDGVIKVLTAGDSF 82 (116)
T ss_dssp EECTTTSCCEECST-TEEEEEEEEET---TEEEEEEEECTTEEEEE-ECCSSEEEEEEEEECEEEEETTEEEEECTTCEE
T ss_pred EecccCceeeeCCC-CeEEEEEecCC---ceEEEEEEECCCCcCCc-EECCcceEEEEEeeEEEEEECCEEEEeCCCCEE
Confidence 33577888876533 34556665542 37788999999999886 777888999999999999999999999999999
Q ss_pred EeCCCCceeEEeCCCccEEEEEE
Q 025000 229 WMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 229 ~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+++++++|++.|.+ +++++..
T Consensus 83 ~ip~~~~H~~~~~~--~~~~l~v 103 (116)
T 2pfw_A 83 FVPPHVDHGAVCPT--GGILIDT 103 (116)
T ss_dssp EECTTCCEEEEESS--CEEEEEE
T ss_pred EECcCCceeeEeCC--CcEEEEE
Confidence 99999999999998 4555544
No 81
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.44 E-value=8.6e-13 Score=102.92 Aligned_cols=76 Identities=14% Similarity=0.127 Sum_probs=65.9
Q ss_pred CcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEe
Q 025000 61 SHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERR 136 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~ 136 (259)
..+.+.+++++||+..+.|.|. .+|++||++|++++++.+|+++.|++||++++|++.+|+++| +++++++++..+
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 37 NDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp SSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 3577889999999998888776 599999999999999735889999999999999999999999 568888888654
No 82
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.43 E-value=3.9e-13 Score=110.03 Aligned_cols=86 Identities=9% Similarity=0.108 Sum_probs=72.2
Q ss_pred cceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCe
Q 025000 48 NTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGS 127 (259)
Q Consensus 48 ~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~ 127 (259)
++.+..+.++..+..+...+++++ ++.... ++..+|++|||+|++++++ +|+++.|++||++|||+|.+|+|+|.++
T Consensus 51 ~v~i~~l~s~~~~~~~s~g~~~~e-~~~~~~-~~~~eE~~yVLeG~~~l~i-~g~~~~l~~GD~i~iP~G~~h~~~n~~~ 127 (151)
T 4axo_A 51 VVYTKDLFTLEESPRLGCGMMEMK-ETTFDW-TLNYDEIDYVIDGTLDIII-DGRKVSASSGELIFIPKGSKIQFSVPDY 127 (151)
T ss_dssp CEEEEECSCTTTCSSCEEEEEEEE-EEEEEE-ECSSEEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred CEEEEEeecCCCCCcEEEEEEEEc-CccccE-eCCCcEEEEEEEeEEEEEE-CCEEEEEcCCCEEEECCCCEEEEEeCCC
Confidence 344555787777778888888887 433333 4578999999999999999 9999999999999999999999999888
Q ss_pred EEEEEEEEe
Q 025000 128 ATLVVFERR 136 (259)
Q Consensus 128 a~~l~v~~~ 136 (259)
++++|+..+
T Consensus 128 a~~l~V~~P 136 (151)
T 4axo_A 128 ARFIYVTYP 136 (151)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEECC
Confidence 999999654
No 83
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.43 E-value=7e-13 Score=101.70 Aligned_cols=73 Identities=10% Similarity=0.162 Sum_probs=67.5
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~ 134 (259)
..+.+.+++++||+..+.|.|..+|++||++|++++.+ +|+++.|++||++++|++.+|+++|.++++++++.
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v~ 110 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI-DQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLVV 110 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTSCEEEEESSCEEEEEEE
T ss_pred CceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCCEEEEECCCceEEEEE
Confidence 47889999999998888888889999999999999999 99999999999999999999999997788888874
No 84
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.43 E-value=5e-13 Score=124.84 Aligned_cols=77 Identities=14% Similarity=0.006 Sum_probs=70.8
Q ss_pred CcceEEEEEEecCCcccCcceeeccceEEEEEEceEEE-EeCCEEEEccCCcEEEeCCCCceeEEe-CCCccEEEEEEee
Q 025000 176 PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY-RLGDSWYPVQAGDVLWMAPFVPQWYAA-LGKTRTRYLLYKD 253 (259)
Q Consensus 176 ~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~-~~~g~~~~v~~GD~i~~~~~~~H~~~n-~G~e~~~fi~~k~ 253 (259)
...+.+++.+|+||++++. |.|..+|.+|||+|+|.+ .+||+.+++++||++++++|..|++.| +|++++.||+.-|
T Consensus 120 t~~L~a~~~~l~PG~~~~~-HrH~~~ev~~IleG~G~~t~v~G~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~v~d 198 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGA-HRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 198 (394)
T ss_dssp BTTBEEEEEEECTTCBCCC-EEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCeeEEEEEEECCCCCcCC-ccCCcceEEEEEEeeEEEEEECCEEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEEccc
Confidence 3568889999999999997 666777999999999987 999999999999999999999999999 9999999998655
No 85
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.43 E-value=7e-13 Score=102.37 Aligned_cols=75 Identities=11% Similarity=0.146 Sum_probs=67.3
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEE-EEeCCcEEEeCCCCcEEEEe--CCeEEEEEEEEe
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSS-KLMVDSYTYLPPNFAHSLRA--EGSATLVVFERR 136 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~-~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~~~ 136 (259)
..+.+.+++++||+..+.|.|..+|++||++|++++.+ +++++ .|++||++++|++.+|+++| +.+++++++..+
T Consensus 25 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i-~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~ 102 (117)
T 2b8m_A 25 EHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL-EDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAP 102 (117)
T ss_dssp SSCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEE-TTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECS
T ss_pred CceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEE-CCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 46888899999999888888889999999999999999 99999 99999999999999999999 456788888544
No 86
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.43 E-value=5e-13 Score=104.28 Aligned_cols=76 Identities=14% Similarity=0.148 Sum_probs=68.5
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCC-eEEEEEEEEe
Q 025000 60 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEG-SATLVVFERR 136 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~-~a~~l~v~~~ 136 (259)
+..+.+.+++++||+..+.|.|..+|++||++|++++.+ +|+++.|++||++++|++.+|+++|.+ +++++++..+
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v~~p 114 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI-GEETRVLRPGMAYTIPGGVRHRARTFEDGCLVLDIFSP 114 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE-TTEEEEECTTEEEEECTTCCEEEECCTTCEEEEEEEES
T ss_pred CCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEECCCCEEEEEEECC
Confidence 457899999999999888888888999999999999999 999999999999999999999999944 5888887544
No 87
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.43 E-value=5.1e-13 Score=107.97 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=66.7
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEE------EEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW------YPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~------~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
.+.+..++++||..++.|.|+..+|.+|||+|++.+.++|+. +.+++||++|+++|++|++.|.|++++++++.
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 456778899999999874443456999999999999999999 99999999999999999999999999999876
Q ss_pred e
Q 025000 252 K 252 (259)
Q Consensus 252 k 252 (259)
.
T Consensus 122 ~ 122 (148)
T 2oa2_A 122 Y 122 (148)
T ss_dssp E
T ss_pred E
Confidence 4
No 88
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.42 E-value=3.2e-13 Score=124.99 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=70.9
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEceEE-EEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGI-YRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~-~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
..+.+++.+|+||+.++. |.|.+++.+|||+|+|. +.+||+.+++++||++++|+++.|++.|+|+++++||+.-|
T Consensus 101 ~~L~a~~~~l~PG~~~~~-HrH~~~ev~~VleG~G~~~~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~D 177 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPE-HRHSQNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGLD 177 (368)
T ss_dssp SSCEEEEEEECTTCEEEE-EEESSCEEEECSSCEEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEC
T ss_pred CceEEEEEEECCCCccCc-eecccceEEEEEecceEEEEECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEecc
Confidence 468899999999999997 67778899999999995 89999999999999999999999999999999999998776
No 89
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.41 E-value=2.6e-12 Score=98.49 Aligned_cols=86 Identities=16% Similarity=0.247 Sum_probs=70.7
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCC
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
+++..+.|... ..+.+..+++.||..++. |.|..+|.+|||+|++.+.++|+.+.+++||++|+++|++|++.|.+
T Consensus 27 ~~~~~~~l~~~---~~~~~~~~~~~~g~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~ 102 (115)
T 1yhf_A 27 DQMLSRTLVQR---QDLGITVFSLDKGQEIGR-HSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVE 102 (115)
T ss_dssp TCEEEEEEEEE---TTEEEEEEEECTTCEEEE-ECCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEESS
T ss_pred CCeEEEEEEeC---CceEEEEEEECCCCccCC-EECCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECC
Confidence 34566666642 245677899999999986 67778899999999999999999999999999999999999999998
Q ss_pred CccEEEEEEe
Q 025000 243 KTRTRYLLYK 252 (259)
Q Consensus 243 ~e~~~fi~~k 252 (259)
+..+..++++
T Consensus 103 ~~~~~~v~~~ 112 (115)
T 1yhf_A 103 AFQMLLVVVK 112 (115)
T ss_dssp CEEEEEEEEC
T ss_pred CceEEEEEEc
Confidence 5544444443
No 90
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.40 E-value=1.6e-12 Score=106.43 Aligned_cols=89 Identities=15% Similarity=0.221 Sum_probs=75.1
Q ss_pred CcceEEEEecCC-CC-CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCC---------cEEEEeCCcEEEeC
Q 025000 47 TNTLGAYLITPA-MG-SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASG---------VSSKLMVDSYTYLP 115 (259)
Q Consensus 47 ~~~~~~~l~sp~-~g-~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~g---------e~~~L~~Gd~i~~p 115 (259)
++...++++++. .| ..+.+++++++||+..+.|.|..+|++||++|++++.+ ++ +++.|++||++++|
T Consensus 23 ~G~~~~~l~~~~~~g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~-~~~~~~~~~~~~~~~l~~Gd~i~ip 101 (163)
T 1lr5_A 23 EGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLM-GSSSLKYPGQPQEIPFFQNTTFSIP 101 (163)
T ss_dssp TTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEE-CCSSSSSCCSCEEEEECTTEEEEEC
T ss_pred CCcceEEEeccccCCCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEE-CCccccccCccEEEEeCCCCEEEEC
Confidence 345556666663 44 47999999999999888887888999999999999999 88 89999999999999
Q ss_pred CCCcEEEEeC---CeEEEEEEEEe
Q 025000 116 PNFAHSLRAE---GSATLVVFERR 136 (259)
Q Consensus 116 ~~~~H~~~N~---~~a~~l~v~~~ 136 (259)
++.+|+++|. ++++++++..+
T Consensus 102 ~~~~H~~~n~~~~~~~~~l~i~~~ 125 (163)
T 1lr5_A 102 VNDPHQVWNSDEHEDLQVLVIISR 125 (163)
T ss_dssp TTCCEEEECCCSSSCEEEEEEEES
T ss_pred CCCcEEeEeCCCCCCEEEEEEECC
Confidence 9999999994 37888888543
No 91
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.40 E-value=7.3e-13 Score=124.75 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=71.0
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe----CCEEEEccCCcEEEeCCCCceeEEeCC-CccEEEEEEe
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYK 252 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~----~g~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k 252 (259)
.+.+.+++++||+.++.| ||..+|.+|||+|+|++.+ +++++.|++||++++|+|..|+++|+| +++|++|++.
T Consensus 48 ~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~ 126 (416)
T 1uij_A 48 DYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLA 126 (416)
T ss_dssp TCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEe
Confidence 489999999999999986 8889999999999999997 689999999999999999999999995 9999999998
Q ss_pred ec
Q 025000 253 DV 254 (259)
Q Consensus 253 ~~ 254 (259)
+.
T Consensus 127 ~~ 128 (416)
T 1uij_A 127 IP 128 (416)
T ss_dssp EE
T ss_pred cc
Confidence 85
No 92
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.40 E-value=9.4e-13 Score=115.43 Aligned_cols=82 Identities=9% Similarity=-0.003 Sum_probs=70.3
Q ss_pred eeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe--------CCE------------EEEccCCcEEE
Q 025000 170 LLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL--------GDS------------WYPVQAGDVLW 229 (259)
Q Consensus 170 l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~--------~g~------------~~~v~~GD~i~ 229 (259)
+.+.+.+..+.+..++++||+..+.|.|+..+|.+|||+|++.+++ +++ ++.+++||+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~ 113 (239)
T 2xlg_A 34 ASCSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIY 113 (239)
T ss_dssp EEEEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEE
T ss_pred eccCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEE
Confidence 3344445677788899999999887545447799999999999999 999 99999999999
Q ss_pred eCCCCceeEEeCCCccEEE-EEE
Q 025000 230 MAPFVPQWYAALGKTRTRY-LLY 251 (259)
Q Consensus 230 ~~~~~~H~~~n~G~e~~~f-i~~ 251 (259)
+++|++|++.|.|++++++ +++
T Consensus 114 iP~g~~H~~~N~~~~~~~~~l~~ 136 (239)
T 2xlg_A 114 SPNHYMHGFVNPTDKTLPIVFVW 136 (239)
T ss_dssp ECTTEEEEEECCSSSCEEEEEEE
T ss_pred ECCCCCEEEEeCCCCCEEEEEEE
Confidence 9999999999999999988 554
No 93
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.39 E-value=3.1e-12 Score=103.34 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=66.8
Q ss_pred CCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcE------EEEeCCcEEEeCCCCcEEEEe--CCeEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVS------SKLMVDSYTYLPPNFAHSLRA--EGSATL 130 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~ge~------~~L~~Gd~i~~p~~~~H~~~N--~~~a~~ 130 (259)
+..+.+++++++||+..+.|.|. .+|++||++|++++.+ +++. +.|++||+++||+|.+|+++| ++++++
T Consensus 40 ~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i-~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~ 118 (148)
T 2oa2_A 40 GDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQM-GHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKL 118 (148)
T ss_dssp CSSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEE-ESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred CCceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEE-CCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEE
Confidence 45788999999999988888664 7899999999999999 8888 999999999999999999999 457888
Q ss_pred EEEEEe
Q 025000 131 VVFERR 136 (259)
Q Consensus 131 l~v~~~ 136 (259)
+++..+
T Consensus 119 l~i~~~ 124 (148)
T 2oa2_A 119 YSIYAP 124 (148)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 887543
No 94
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.39 E-value=2e-12 Score=109.31 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=68.3
Q ss_pred eCCCCCcceEEEEEEecCCcc------cCcceeec---cceEEEEEEceEEEEeCCEE-----EEccCCcEEEeCCCCce
Q 025000 171 LPQAVPFDFNIHIMDFQPGDF------LNVKEVHY---NQHGLLLLEGQGIYRLGDSW-----YPVQAGDVLWMAPFVPQ 236 (259)
Q Consensus 171 ~p~~~~~~~~~~~~t~~PG~~------~~~~~~H~---~eh~~~il~G~g~~~~~g~~-----~~v~~GD~i~~~~~~~H 236 (259)
+..+....+.+.+.+++||+. .+. |.|. .+|.+|||+|++.+.++|+. +.+++||+++++++.+|
T Consensus 59 ~~~~~~~~l~~~~~~l~PG~~~~E~~~~~~-H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H 137 (190)
T 1x82_A 59 EQEEKEGDLNFATTVLYPGKVGKEFFFTKG-HFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAH 137 (190)
T ss_dssp CCCSCTTCEEEEEEEECCCEETTEECBCCC-BBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEE
T ss_pred cCCCCCCCeEEEEEEECCCcCCCcccCCCC-eECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeE
Confidence 443334466777889999998 555 4453 47999999999999999987 99999999999999999
Q ss_pred eEEeCCCccEEEEEEe
Q 025000 237 WYAALGKTRTRYLLYK 252 (259)
Q Consensus 237 ~~~n~G~e~~~fi~~k 252 (259)
++.|+|+++++|++.-
T Consensus 138 ~~~N~g~~~~~~l~v~ 153 (190)
T 1x82_A 138 RTVNIGDEPFIFLAIY 153 (190)
T ss_dssp EEEECSSSCEEEEEEE
T ss_pred EEEECCcccEEEEEEE
Confidence 9999999999999764
No 95
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.38 E-value=3.3e-12 Score=103.42 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=73.9
Q ss_pred ceEEEEecCCC-CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEeCCCCcEEEEe--
Q 025000 49 TLGAYLITPAM-GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPPNFAHSLRA-- 124 (259)
Q Consensus 49 ~~~~~l~sp~~-g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~p~~~~H~~~N-- 124 (259)
...+.|..+.. +..+.+++++++||+..+.|.|..+|++||++|++++++ ++++ +.|++||++++|++.+|+++|
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~-~~~~~~~l~~Gd~i~ip~~~~H~~~n~~ 111 (147)
T 2f4p_A 33 VWVKMLVTDENGVFNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE-RGKPARILKKGDVVEIPPNVVHWHGAAP 111 (147)
T ss_dssp EEEEEEECCTTCSSSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEE-TTSCCEEEETTCEEEECTTCCEEEEEBT
T ss_pred EEEEEEECCCCCCCcEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEE-CCEEEEEECCCCEEEECCCCcEEeEeCC
Confidence 35555666555 568999999999999888887888999999999999999 9998 999999999999999999999
Q ss_pred CCeEEEEEEEE
Q 025000 125 EGSATLVVFER 135 (259)
Q Consensus 125 ~~~a~~l~v~~ 135 (259)
+++++++++..
T Consensus 112 ~~~~~~l~v~~ 122 (147)
T 2f4p_A 112 DEELVHIGIST 122 (147)
T ss_dssp TBCEEEEEEEC
T ss_pred CCCEEEEEEEc
Confidence 45778877753
No 96
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.38 E-value=2.1e-12 Score=119.18 Aligned_cols=105 Identities=15% Similarity=0.144 Sum_probs=79.9
Q ss_pred eeccCCCCCCcccCC------ceEEEEEee---CC-CC----CcceEEEEEEecCCcccCcceeeccceEEEEEEceEEE
Q 025000 148 IVGSTDKQPLLETPG------EVFQLRKLL---PQ-AV----PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY 213 (259)
Q Consensus 148 ~v~~~~di~~~~~~g------~~~~~~~l~---p~-~~----~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~ 213 (259)
+.-.|+++...-.+. ++...+.+. |. .. ...+.+.+++++||+..+. |.|..+|.+|||+|+|.+
T Consensus 55 ~~~~~~~~~~~l~~~~~~~~~~~~~rr~l~~~np~~~g~~~~~~~l~~~~~~l~PG~~~~~-H~H~~~e~~yVl~G~g~~ 133 (354)
T 2d40_A 55 AYWNYQEIRPLLLESGGLIGAKEAVRRVLVLENPALRGQSSITATLYAGLQLIMPGEVAPS-HRHNQSALRFIVEGKGAF 133 (354)
T ss_dssp EEECSTTTCCCC-----------------EECCSSCTTSCCSSSSCEEEEEEECTTCEEEE-EEESSCEEEEEEECSSCE
T ss_pred ceeCHHHHHHHHHHhhhccCcCCCCEEEEEecCCCcCCccccCCcEEEEEEEECCCCCcCC-eecCcceEEEEEEEEEEE
Confidence 455677766554431 222344432 33 11 2367889999999999986 677888999999999999
Q ss_pred -EeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 214 -RLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 214 -~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
.+||+.+++++||+++++++++|++.|.|+++++||++.|
T Consensus 134 t~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d 174 (354)
T 2d40_A 134 TAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLD 174 (354)
T ss_dssp EEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEEC
T ss_pred EEECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEEC
Confidence 9999999999999999999999999999999999998865
No 97
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.38 E-value=2.4e-12 Score=105.82 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=75.1
Q ss_pred cceeeccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEE--ceEEEEeCCEEEEc
Q 025000 145 TEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLE--GQGIYRLGDSWYPV 222 (259)
Q Consensus 145 p~~~v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~--G~g~~~~~g~~~~v 222 (259)
...-+-+++++|..+..+|. ..|.|...+ .+-+.+.++++ |...+.|.|+..+|.+|||+ |+|.+.+||++++|
T Consensus 15 ~~~~iv~~~ei~~~~~~~G~-srR~l~~~~-~fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idge~~~l 90 (157)
T 4h7l_A 15 AMPQMISLSEIEAVACPCGW-AQRAFGHDA-GTSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNGQSYPL 90 (157)
T ss_dssp TSCEEEETTTSCCEEETTEE-EEEESCGGG-CCSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETTEEEEC
T ss_pred cCceEEEhhhCCCccCCCCe-eeEEeEcCC-CCcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECCEEEEe
Confidence 44557779999998887653 455555543 23334445554 55556644445679999999 99999999999999
Q ss_pred cCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 223 QAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 223 ~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
++||++++++|+.|++. | +++||+.
T Consensus 91 ~~GD~v~IPpg~~H~i~--g--~l~~L~I 115 (157)
T 4h7l_A 91 TKLLAISIPPLVRHRIV--G--EATIINI 115 (157)
T ss_dssp CTTEEEEECTTCCEEEE--S--CEEEEEE
T ss_pred CCCCEEEECCCCeEeeE--C--CEEEEEE
Confidence 99999999999999997 3 7999986
No 98
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.38 E-value=1.2e-12 Score=109.23 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=66.5
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
....+++++|+||+..+. |.|..+|.+|||+|+..+.++ |+++.+++||++ ++++.+|+++|.|++++++|+.
T Consensus 77 ~G~~~~~v~l~PG~~~~~-H~H~~eE~~~VLeGel~l~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPM-HRTNSIDYGIVLEGEIELELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCC-BCCSEEEEEEEEESCEEEECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCC-eecCceEEEEEEeCEEEEEECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 356778999999999997 567777888999999999999 899999999999 9999999999999999999874
No 99
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.9e-12 Score=107.46 Aligned_cols=74 Identities=9% Similarity=0.115 Sum_probs=67.0
Q ss_pred ceEEEEEEecC-CcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 178 DFNIHIMDFQP-GDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 178 ~~~~~~~t~~P-G~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
.+.+-+++|+| |+..+.+++|..|+.+|||+|+..++++|+.+.+++||.+|++++.+|.++|.|++++++|.-
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 45555789999 877777778888999999999999999999999999999999999999999999999998863
No 100
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.37 E-value=1.2e-12 Score=123.92 Aligned_cols=76 Identities=12% Similarity=0.145 Sum_probs=70.2
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC----CEEEEccCCcEEEeCCCCceeEEeCC-CccEEEEEEe
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG----DSWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYK 252 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~----g~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k 252 (259)
++.+..++|+||+.++.| ||..+|.+|||+|+|++.+. ++.+.|++||++++|+|..||+.|+| +++|++|+..
T Consensus 60 ~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~ 138 (434)
T 2ea7_A 60 NYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLA 138 (434)
T ss_dssp TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEe
Confidence 489999999999999986 88899999999999999873 68999999999999999999999999 8999999987
Q ss_pred ec
Q 025000 253 DV 254 (259)
Q Consensus 253 ~~ 254 (259)
|.
T Consensus 139 ~~ 140 (434)
T 2ea7_A 139 IP 140 (434)
T ss_dssp EE
T ss_pred cC
Confidence 64
No 101
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.37 E-value=6.3e-12 Score=96.51 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=65.9
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCcc
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTR 245 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~ 245 (259)
..+.|...+ .+.+..+++.||..++. |.|..+|.+|||+|++.+.++|+.+.+++||+++++++++|++.|. ++
T Consensus 28 ~~~~l~~~~---~~~~~~~~~~~g~~~~~-H~h~~~e~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~--~~ 101 (114)
T 2ozj_A 28 LSMALAQSD---RVQISLFSFADGESVSE-EEYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGK--GR 101 (114)
T ss_dssp EEEECEECS---SEEEEEEEEETTSSCCC-BCCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCCBEEEEE--EE
T ss_pred EEEEEEcCC---CceEEEEEECCCCcccc-EECCCCeEEEEEeCEEEEEECCEEEEecCCCEEEECCCCcEEEEeC--CC
Confidence 344455332 25577888999999986 6788889999999999999999999999999999999999999997 46
Q ss_pred EEEEE
Q 025000 246 TRYLL 250 (259)
Q Consensus 246 ~~fi~ 250 (259)
++|++
T Consensus 102 ~~~~~ 106 (114)
T 2ozj_A 102 FKMLQ 106 (114)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 66654
No 102
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.36 E-value=3.7e-12 Score=111.27 Aligned_cols=87 Identities=11% Similarity=0.079 Sum_probs=75.7
Q ss_pred eEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEE-eCCCCceeEEeCC
Q 025000 164 VFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLW-MAPFVPQWYAALG 242 (259)
Q Consensus 164 ~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~-~~~~~~H~~~n~G 242 (259)
++..+.|...+ ..|.+++++||..++. |.|.+++.+|||+|++.+.++|+.+.+++||++| +++|++|++.|.|
T Consensus 23 Gv~~~~l~~~~----~~~~~~~~~pg~~~~~-H~H~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~ 97 (243)
T 3h7j_A 23 GVRQYSTVRGD----TEVLMSYVPPHTNVEP-HQHKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDT 97 (243)
T ss_dssp SCEEEEEEETT----EEEEEEEECTTEEEEE-ECCSSEEEEEEEESEEEEEETTEEEEEETTTCEEEECTTCCEEEEECS
T ss_pred CeEEEEEECCC----CEEEEEEECCCCccCC-EECCCcEEEEEEEeEEEEEECCEEEEECCCCEEEEcCCCCcEeeEeCC
Confidence 45566554332 3577888999999986 7888999999999999999999999999999998 9999999999999
Q ss_pred CccEEEEEEeecC
Q 025000 243 KTRTRYLLYKDVN 255 (259)
Q Consensus 243 ~e~~~fi~~k~~n 255 (259)
++++++|-.|+..
T Consensus 98 ~~~~~~l~i~r~~ 110 (243)
T 3h7j_A 98 DQEVIAIDIKRLK 110 (243)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCcEEEEEEeccC
Confidence 9999999988764
No 103
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.34 E-value=6e-12 Score=102.93 Aligned_cols=85 Identities=7% Similarity=0.114 Sum_probs=72.4
Q ss_pred CceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeC
Q 025000 162 GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 162 g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
++.+.++.|...+.+..+.+.+++++ |+..+ .||..+|.+|||+|+..+.++|+.+.+++||++|+++|.+|.+.|.
T Consensus 49 ~~~v~i~~l~s~~~~~~~s~g~~~~e-~~~~~--~~~~~eE~~yVLeG~~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~ 125 (151)
T 4axo_A 49 SDVVYTKDLFTLEESPRLGCGMMEMK-ETTFD--WTLNYDEIDYVIDGTLDIIIDGRKVSASSGELIFIPKGSKIQFSVP 125 (151)
T ss_dssp TCCEEEEECSCTTTCSSCEEEEEEEE-EEEEE--EECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CCCEEEEEeecCCCCCcEEEEEEEEc-Ccccc--EeCCCcEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCEEEEEeC
Confidence 37788998886555668888899998 66654 4667889999999999999999999999999999999999999998
Q ss_pred CCccEEEEEE
Q 025000 242 GKTRTRYLLY 251 (259)
Q Consensus 242 G~e~~~fi~~ 251 (259)
+++++|+-
T Consensus 126 --~~a~~l~V 133 (151)
T 4axo_A 126 --DYARFIYV 133 (151)
T ss_dssp --EEEEEEEE
T ss_pred --CCEEEEEE
Confidence 67777763
No 104
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.33 E-value=3.6e-12 Score=120.95 Aligned_cols=75 Identities=23% Similarity=0.307 Sum_probs=69.3
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe----CCEEEEccCCcEEEeCCCCceeEEeCC-CccEEEEEEe
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYK 252 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~----~g~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k 252 (259)
.+.+.+++++||+..+.| ||..+|.+|||+|+|++.+ |++.+.+++||++++|+|.+||++|+| ++++++|+..
T Consensus 85 ~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~ 163 (445)
T 2cav_A 85 DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFA 163 (445)
T ss_dssp TEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEe
Confidence 499999999999999986 8889999999999999986 248999999999999999999999999 8999999877
Q ss_pred e
Q 025000 253 D 253 (259)
Q Consensus 253 ~ 253 (259)
|
T Consensus 164 ~ 164 (445)
T 2cav_A 164 I 164 (445)
T ss_dssp E
T ss_pred c
Confidence 6
No 105
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.33 E-value=9.9e-12 Score=104.97 Aligned_cols=80 Identities=10% Similarity=0.102 Sum_probs=68.2
Q ss_pred ecCCCCCcEEEEEEEecCCCc------CCCCCC---CceEEEEEEECEEEEEEcCCcE-----EEEeCCcEEEeCCCCcE
Q 025000 55 ITPAMGSHFVMYLANMQENAR------SALPPH---DVERFIFVVQGSAMLTNASGVS-----SKLMVDSYTYLPPNFAH 120 (259)
Q Consensus 55 ~sp~~g~~f~~~~~~l~Pg~~------~~~h~~---~~Eef~yVl~G~l~v~v~~ge~-----~~L~~Gd~i~~p~~~~H 120 (259)
..|.....+.+.+++++||+. .+.|.| +.+|++||++|++++.+ ++++ +.|++||++++|++.+|
T Consensus 59 ~~~~~~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i-~~~~g~~~~~~l~~GD~v~ip~g~~H 137 (190)
T 1x82_A 59 EQEEKEGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLL-QTPEGDAKWISMEPGTVVYVPPYWAH 137 (190)
T ss_dssp CCCSCTTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEE-ECTTCCEEEEEECTTCEEEECTTCEE
T ss_pred cCCCCCCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEE-cCcCCcEEEEEECCCcEEEECCCCeE
Confidence 667666788999999999987 556645 45899999999999999 7877 99999999999999999
Q ss_pred EEEe--CCeEEEEEEEE
Q 025000 121 SLRA--EGSATLVVFER 135 (259)
Q Consensus 121 ~~~N--~~~a~~l~v~~ 135 (259)
+++| +++++++++..
T Consensus 138 ~~~N~g~~~~~~l~v~~ 154 (190)
T 1x82_A 138 RTVNIGDEPFIFLAIYP 154 (190)
T ss_dssp EEEECSSSCEEEEEEEE
T ss_pred EEEECCcccEEEEEEEC
Confidence 9999 55788887753
No 106
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.33 E-value=3.9e-12 Score=106.44 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=65.8
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcC----CcEEEEeCCcEEEeCCCCcEEEEe--CC-eEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNAS----GVSSKLMVDSYTYLPPNFAHSLRA--EG-SATLVVF 133 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~----ge~~~L~~Gd~i~~p~~~~H~~~N--~~-~a~~l~v 133 (259)
..+.+.+++++||+..++|++..+|++||++|++++++ . ++++.|++||+++||+|.+|.++| ++ +++++++
T Consensus 39 ~~~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v-~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 39 RDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVL-VNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp TTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEE-EETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEE-EeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 47999999999999887775678999999999999998 5 788999999999999999999999 33 6788887
Q ss_pred EEe
Q 025000 134 ERR 136 (259)
Q Consensus 134 ~~~ 136 (259)
..+
T Consensus 118 ~~~ 120 (178)
T 1dgw_A 118 AIT 120 (178)
T ss_dssp EEC
T ss_pred ECC
Confidence 654
No 107
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.32 E-value=6.4e-12 Score=100.56 Aligned_cols=83 Identities=18% Similarity=0.141 Sum_probs=67.5
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCC
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
..+..+.|...+.. .+.+.+++++|| .. +.||..+|.+|||+|++.++++|+.+.+++||++++++|.+|.+.|.
T Consensus 42 ~~~~~~~L~~~~~~-~~~~~~~~~~pG-~~--~~h~~~~E~~~VLeG~~~l~~~g~~~~l~~GD~i~~p~g~~h~~~~~- 116 (133)
T 2pyt_A 42 CVGLTDLVTEQDGS-SMAAGFMQWDNA-FF--PWTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTP- 116 (133)
T ss_dssp CCEEEEEECGGGTC-SSEEEEEEEEEE-EE--EEECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE-
T ss_pred ceEEEEEEecCCCC-cEEEEEEEECCC-Cc--cccCCCCEEEEEEECEEEEEECCEEEEECCCcEEEECCCCEEEEEeC-
Confidence 34466666654444 788889999999 33 34556789999999999999999999999999999999999999984
Q ss_pred CccEEEEEE
Q 025000 243 KTRTRYLLY 251 (259)
Q Consensus 243 ~e~~~fi~~ 251 (259)
+++++|+-
T Consensus 117 -~~~~~l~v 124 (133)
T 2pyt_A 117 -TSVRFLYV 124 (133)
T ss_dssp -EEEEEEEE
T ss_pred -CCEEEEEE
Confidence 56776653
No 108
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.31 E-value=4.9e-12 Score=95.74 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=65.1
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCc-eEE-EEEEECEEEEEEcC-CcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHDV-ERF-IFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~-Eef-~yVl~G~l~v~v~~-ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~ 135 (259)
+..+.+.+++++||...+.|.|.. .|+ +||++|++++.+ + |+++.|++||++++|++.+|+++|.++++++++..
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~-~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~~~~ 107 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG-DGDAVIPAPRGAVLVAPISTPHGVRAVTDMKVLVTIA 107 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC-GGGCEEEECTTEEEEEETTSCEEEEESSSEEEEEEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe-CCCEEEEECCCCEEEeCCCCcEEEEEcCCcEEEEEEC
Confidence 457888999999998877787764 466 899999999999 8 79999999999999999999999977788877753
No 109
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.31 E-value=2e-11 Score=95.31 Aligned_cols=74 Identities=12% Similarity=0.150 Sum_probs=67.0
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 134 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~ 134 (259)
...|.++..+++||...+.|.|...|++||++|++++.+ +|+++.|++||.+++|++..|+++| +++++++++.
T Consensus 31 ~~~~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i-~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 31 NTPFGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRI-NDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp CCSSEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CCCcEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEE-CCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 357889999999999888888899999999999999999 9999999999999999999999999 4567777664
No 110
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.31 E-value=2.3e-11 Score=111.50 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=83.3
Q ss_pred eeccCCCCCCcccCCceEEEEEeeCCCC--CcceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEe---CC--EE
Q 025000 148 IVGSTDKQPLLETPGEVFQLRKLLPQAV--PFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRL---GD--SW 219 (259)
Q Consensus 148 ~v~~~~di~~~~~~g~~~~~~~l~p~~~--~~~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~---~g--~~ 219 (259)
+.-++++.+....+||. ++.+...+. ...+.+..++++||+..+. |.|. .+|.+|||+|++.+.+ || +.
T Consensus 21 ~~~~~~~~~~~~~~~G~--~~~~~~~~~p~~~~~~~~~~~l~pg~~~~~-H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~ 97 (361)
T 2vqa_A 21 FTYAFSKTPLVLYDGGT--TKQVGTYNFPVSKGMAGVYMSLEPGAIREL-HWHANAAEWAYVMEGRTRITLTSPEGKVEI 97 (361)
T ss_dssp SEECGGGSCCEEETTEE--EEEESTTTCTTCCSCEEEEEEECTTCEEEE-EECTTCCEEEEEEESEEEEEEECTTSCEEE
T ss_pred eEEEcccCCceecCCce--EEEeChhhCccccceeeEEEEEcCCCCCCc-eeCCCCCEEEEEEEeEEEEEEEeCCCcEEE
Confidence 55567777665555543 444544332 2356788999999998875 6677 7899999999999999 76 68
Q ss_pred EEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecC
Q 025000 220 YPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 255 (259)
Q Consensus 220 ~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~n 255 (259)
+.+++||++++++|.+|++.|.|+++++||+..+-.
T Consensus 98 ~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~ 133 (361)
T 2vqa_A 98 ADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDG 133 (361)
T ss_dssp EEEETTEEEEECTTCEEEEEECSSSCEEEEEEESST
T ss_pred EEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC
Confidence 999999999999999999999999999999876654
No 111
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.29 E-value=7.9e-12 Score=97.62 Aligned_cols=84 Identities=10% Similarity=0.200 Sum_probs=68.3
Q ss_pred EEEecCCC-CCcEEEEEEEecCCCcCC-CCCCCceE-EEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CC
Q 025000 52 AYLITPAM-GSHFVMYLANMQENARSA-LPPHDVER-FIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EG 126 (259)
Q Consensus 52 ~~l~sp~~-g~~f~~~~~~l~Pg~~~~-~h~~~~Ee-f~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~ 126 (259)
.+++++.. +..+.+.+.+++||+..+ .|.|...| ++||++|++++.+ +++++.|++||++++|++.+|+++| ++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i-~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~ 92 (125)
T 3cew_A 14 RVELHDSLALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI-DGEKIELQAGDWLRIAPDGKRQISAASDS 92 (125)
T ss_dssp CEECHHHHTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE-TTEEEEEETTEEEEECTTCCEEEEEBTTB
T ss_pred eEEEEcccCCCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEEEcCCCC
Confidence 34455444 357888999999998887 67676655 5559999999999 9999999999999999999999999 45
Q ss_pred eEEEEEEEEe
Q 025000 127 SATLVVFERR 136 (259)
Q Consensus 127 ~a~~l~v~~~ 136 (259)
+++++++..+
T Consensus 93 ~~~~~~i~~~ 102 (125)
T 3cew_A 93 PIGFLCIQVK 102 (125)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEcC
Confidence 7888887544
No 112
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.29 E-value=7.2e-12 Score=95.25 Aligned_cols=68 Identities=18% Similarity=0.280 Sum_probs=57.2
Q ss_pred EEEEecCCCcCCCCCCCc-eEEEEEEECEEEEEEcCC-cEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEE
Q 025000 66 YLANMQENARSALPPHDV-ERFIFVVQGSAMLTNASG-VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~-Eef~yVl~G~l~v~v~~g-e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~ 135 (259)
..+.+.||. ...|.|.. +|++||++|++++++ +| +++.|++||++++|+|.+|+++|.++++++++..
T Consensus 31 ~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~-~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~i~~ 100 (107)
T 2i45_A 31 FHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF-ADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIEL 100 (107)
T ss_dssp EEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE-TTSCEEEECTTEEEEECTTCCEEEEEEEEEEEEEEEC
T ss_pred EEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE-CCCcEEEECCCCEEEECCCCcEeeEeCCCeEEEEEEC
Confidence 445666775 45777776 999999999999999 88 9999999999999999999999977888888753
No 113
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.27 E-value=1.4e-11 Score=106.50 Aligned_cols=73 Identities=14% Similarity=0.198 Sum_probs=68.1
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-CCeEEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFE 134 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~l~v~ 134 (259)
..+.+.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||++++|++.+|+++| .++++++++.
T Consensus 151 ~~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i-~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~~ 224 (227)
T 3rns_A 151 PNLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV-DGKPFIVKKGESAVLPANIPHAVEAETENFKMLLIL 224 (227)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE-TTEEEEEETTEEEEECTTSCEEEECCSSCEEEEEEE
T ss_pred CCeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE-CCEEEEECCCCEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 36888999999999888888889999999999999999 9999999999999999999999999 9999988874
No 114
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.27 E-value=3.2e-11 Score=91.21 Aligned_cols=67 Identities=27% Similarity=0.376 Sum_probs=59.0
Q ss_pred ceEEEEEEecCCcccCcceeecc-ceE-EEEEEceEEEEeC-CEEEEccCCcEEEeCCCCceeEEeCCCcc
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYN-QHG-LLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTR 245 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~-eh~-~~il~G~g~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~ 245 (259)
.+.+..++++||..++. |.|.. .+. +|||+|++.+.++ |+.+.+++||++++++|++|++.|.++..
T Consensus 32 ~~~~~~~~~~~g~~~~~-H~H~~~~e~~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPV-HSHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp SCEEEEEEECTTCEEEE-ECCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEEEESSSEE
T ss_pred CEEEEEEEECCCCcCCc-ccCCCCccEEEEEEeCEEEEEeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 45677889999999986 66765 476 8999999999999 79999999999999999999999998744
No 115
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.25 E-value=1.1e-11 Score=108.69 Aligned_cols=78 Identities=14% Similarity=0.249 Sum_probs=66.1
Q ss_pred CCCCCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEc-------CCc------------EEEEeCCcEEEeCC
Q 025000 57 PAMGSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNA-------SGV------------SSKLMVDSYTYLPP 116 (259)
Q Consensus 57 p~~g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~-------~ge------------~~~L~~Gd~i~~p~ 116 (259)
...+..|+++.++++||+..+.|.|. .+|++|||+|++++++. +++ ++.|++||++++|+
T Consensus 37 ~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~ 116 (239)
T 2xlg_A 37 SAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPN 116 (239)
T ss_dssp EETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECT
T ss_pred CCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECC
Confidence 34577899999999999988888554 89999999999999971 466 89999999999999
Q ss_pred CCcEEEEe--CCeEEE-EEEE
Q 025000 117 NFAHSLRA--EGSATL-VVFE 134 (259)
Q Consensus 117 ~~~H~~~N--~~~a~~-l~v~ 134 (259)
|.+|+++| ++++++ +++.
T Consensus 117 g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 117 HYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp TEEEEEECCSSSCEEEEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEEEE
Confidence 99999999 557888 4443
No 116
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.25 E-value=2e-11 Score=96.31 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=57.0
Q ss_pred CCcEEEE--EEEecCCCcCCCCCCCc-eEEEEEEECEEEEEEcCC-cEEEEeCCcEEEeCCCCcEEEEe-CCeEEEEEEE
Q 025000 60 GSHFVMY--LANMQENARSALPPHDV-ERFIFVVQGSAMLTNASG-VSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFE 134 (259)
Q Consensus 60 g~~f~~~--~~~l~Pg~~~~~h~~~~-Eef~yVl~G~l~v~v~~g-e~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~l~v~ 134 (259)
+..+.+. .+.++||+..+.|.|.. +|++||++|++++.+ +| +++.|++||++++|+|.+|+++| ...++++++.
T Consensus 38 ~g~~~~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~-~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l~~~ 116 (134)
T 2o8q_A 38 GGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY-EDIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIV 116 (134)
T ss_dssp TTSCEEEEEEECC-----CCCEEECCSCEEEEEEESEEEEEE-TTTEEEEEETTCEEECCTTCCEEEEEECTTCEEEEEE
T ss_pred CCceEEEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE-CCcEEEEecCCCEEEECCCCcEEeEeCCCCeEEEEEE
Confidence 4455544 44455777777887776 999999999999999 88 99999999999999999999999 4467877653
No 117
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.23 E-value=3e-11 Score=102.70 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=67.3
Q ss_pred cceEEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeC------CE--EEEccCCcEEEeCCCCceeEEeCCCccEE
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLG------DS--WYPVQAGDVLWMAPFVPQWYAALGKTRTR 247 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~------g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 247 (259)
..+.+.+++++||+..+. |.|.. +|.+|||+|++.+.+. ++ ++.+++||++++++|.+|++.|.|+++++
T Consensus 70 ~~~~~~~~~l~pg~~~~~-H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~ 148 (201)
T 1fi2_A 70 LGVSMNRVDFAPGGTNPP-HIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAY 148 (201)
T ss_dssp SSCEEEEEEECTTCEEEE-EECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEE
T ss_pred CceEEEEEEECCCCCCCC-eECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEE
Confidence 457788999999999986 67775 6999999999999885 55 89999999999999999999999999999
Q ss_pred EEEEee
Q 025000 248 YLLYKD 253 (259)
Q Consensus 248 fi~~k~ 253 (259)
+|+.-+
T Consensus 149 ~l~v~~ 154 (201)
T 1fi2_A 149 MVVSFN 154 (201)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 998644
No 118
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.23 E-value=3.5e-11 Score=103.43 Aligned_cols=90 Identities=18% Similarity=0.113 Sum_probs=76.7
Q ss_pred eEEEEecCCC---CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcC-CcEEEEeCCcEEEeCCCCcEEEEe-
Q 025000 50 LGAYLITPAM---GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRA- 124 (259)
Q Consensus 50 ~~~~l~sp~~---g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~-ge~~~L~~Gd~i~~p~~~~H~~~N- 124 (259)
....++.|.- ..++...++.++||...+.|.|..||++|||+|++++.+ + +++.++++||++++|+|++|.+++
T Consensus 116 a~~elvGP~g~~~s~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v-~~g~~~~l~pGd~v~ipsgv~Ha~rt~ 194 (217)
T 4b29_A 116 GWFELAGPSGHFLTQSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHL-RNAPDLMLEPGQTRFHPANAPHAMTTL 194 (217)
T ss_dssp EEEEEEETTSSEECSSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEE-TTSCCEEECTTCEEEECTTCCEEEECC
T ss_pred eEEEEECCCCCCCCCeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEE-CCCCEEecCCCCEEEcCCCCceeEEEC
Confidence 4566777742 568999999999999999998889999999999999999 6 899999999999999999999998
Q ss_pred CCeEEEEEEEEeccccC
Q 025000 125 EGSATLVVFERRYASLE 141 (259)
Q Consensus 125 ~~~a~~l~v~~~y~p~~ 141 (259)
++++..+|+- ...|+.
T Consensus 195 dePllalwvW-~G~~~~ 210 (217)
T 4b29_A 195 TDPILTLVLW-RGAGLG 210 (217)
T ss_dssp SSCEEEEEEE-ESTTTT
T ss_pred CccEEEEEEE-eCCCCC
Confidence 7777766663 555554
No 119
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.22 E-value=6.8e-11 Score=91.37 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=54.2
Q ss_pred cEEEEEEEecCCCcCCC---CCCCceEEEEEEECEEEEEEcCCcE--EEEeCCcEEEeCCCCcEEEEeCC---eEEEEEE
Q 025000 62 HFVMYLANMQENARSAL---PPHDVERFIFVVQGSAMLTNASGVS--SKLMVDSYTYLPPNFAHSLRAEG---SATLVVF 133 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~---h~~~~Eef~yVl~G~l~v~v~~ge~--~~L~~Gd~i~~p~~~~H~~~N~~---~a~~l~v 133 (259)
.+..-++. .+|...+. ++|..+|++|||+|++++++ +|++ +.|++||+++||++.+|+++|.+ ++.++++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~-~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v 107 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC-EGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAV 107 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE-TTCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred CEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEE-CCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEE
Confidence 45444443 45554433 46789999999999999999 8988 99999999999999999999922 4544544
No 120
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.22 E-value=4.1e-11 Score=108.26 Aligned_cols=84 Identities=24% Similarity=0.338 Sum_probs=72.5
Q ss_pred EEEEee-CCCCCcceEEEEEEecCCcccCcceeec-cceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 166 QLRKLL-PQAVPFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 166 ~~~~l~-p~~~~~~~~~~~~t~~PG~~~~~~~~H~-~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..+.|. +.+.+..+.+..+++.||+..+. |.|. .+|.+|||+|++.++++|+.+.+++||+++++++++|++.|.|+
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-h~H~~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 32 VATVMANGRSTGDLFEIVLLSGGKGDAFPL-HVHKDTHEGILVLDGKLELTLDGERYLLISGDYANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EEEEEECHHHHTSSEEEEEEEECTTCEEEE-EECTTCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECST
T ss_pred EEEEEeecCCCCCeEEEEEEEeCCCCCCCc-eeCCCceEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEECCC
Confidence 455566 34345677888999999999887 6666 77999999999999999999999999999999999999999998
Q ss_pred ccEEEEEE
Q 025000 244 TRTRYLLY 251 (259)
Q Consensus 244 e~~~fi~~ 251 (259)
+++|++.
T Consensus 111 -~~~~~~~ 117 (337)
T 1y3t_A 111 -RTRLVSY 117 (337)
T ss_dssp -TEEEEEE
T ss_pred -CeEEEEE
Confidence 6888876
No 121
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.21 E-value=4.9e-11 Score=94.02 Aligned_cols=69 Identities=13% Similarity=-0.017 Sum_probs=54.7
Q ss_pred EEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeCC-EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGD-SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~g-~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+-.+++.||+..+. |.|.. +|.+|||+|++.+.++| +.+.+++||++++++|++|++.|.+++ ++||+.
T Consensus 45 ~~~~~~~~g~~~~~-H~H~~~~E~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 45 VIRAIPGKEAKPTW-HTHTVGFQLFYVLRGWVEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEECC-----CCC-EEECCSCEEEEEEESEEEEEETTTEEEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEecCCCCCCCC-EECCCCcEEEEEEeCEEEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 33444568998886 66765 89999999999999999 999999999999999999999998874 688743
No 122
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.20 E-value=3.8e-11 Score=91.65 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=59.5
Q ss_pred EEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 183 IMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 183 ~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+.+++||.. + .||..+|.+|||+|++.+.++ |+.+.+++||++++++|.+|.+.|.++....|++|
T Consensus 35 ~~~~~pg~~-~--~hH~~~E~~~Vl~G~~~~~i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv~~ 101 (101)
T 1o5u_A 35 IWEKEVSEF-D--WYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNLF 101 (101)
T ss_dssp EEEECSEEE-E--EECSSCEEEEEEEEEEEEEETTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEC
T ss_pred EEEeCCCcc-c--ccCCceEEEEEEeCEEEEEECCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEEEEC
Confidence 677889874 2 347788999999999999999 99999999999999999999999999999998876
No 123
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.20 E-value=5e-11 Score=102.42 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=69.0
Q ss_pred Eee-CCC--CCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEeCCCCceeEEeCCCc
Q 025000 169 KLL-PQA--VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKT 244 (259)
Q Consensus 169 ~l~-p~~--~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e 244 (259)
.|+ |.. .+.++.+-++.+.||...|. |+|..||.||||+|++.++++ |+|..+++||++++++|.+|+++ ++++
T Consensus 119 elvGP~g~~~s~~l~lG~v~l~PG~~yP~-HsHp~EEiy~VLsG~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~r-t~de 196 (217)
T 4b29_A 119 ELAGPSGHFLTQSLRVTVGYWGPGLDYGW-HEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMT-TLTD 196 (217)
T ss_dssp EEEETTSSEECSSCEEEEEEECSSCEEEE-EECSSEEEEEEEEECEEEEETTSCCEEECTTCEEEECTTCCEEEE-CCSS
T ss_pred EEECCCCCCCCCeEEEEEEEECCCCcCCC-CCCCCceEEEEEeCCEEEEECCCCEEecCCCCEEEcCCCCceeEE-ECCc
Confidence 344 643 34678888999999999997 788899999999999999999 99999999999999999999998 6899
Q ss_pred cEEEE
Q 025000 245 RTRYL 249 (259)
Q Consensus 245 ~~~fi 249 (259)
|+.-+
T Consensus 197 Pllal 201 (217)
T 4b29_A 197 PILTL 201 (217)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99633
No 124
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.19 E-value=1.5e-11 Score=93.39 Aligned_cols=76 Identities=9% Similarity=0.145 Sum_probs=61.9
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCce-EEEEEEECEEEEEEcCCc--EEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHDVE-RFIFVVQGSAMLTNASGV--SSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 134 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~E-ef~yVl~G~l~v~v~~ge--~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~ 134 (259)
+.++.+.+++|+||+.+..|.|..+ +++++++|++++...+|+ ...|++||++++|+|.+|+++| +++++|+.++
T Consensus 14 ~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 3578899999999999999977655 444568999998863554 4699999999999999999999 5688888886
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
-
T Consensus 94 ~ 94 (98)
T 2ozi_A 94 L 94 (98)
T ss_dssp E
T ss_pred E
Confidence 3
No 125
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.18 E-value=6.8e-11 Score=112.49 Aligned_cols=88 Identities=16% Similarity=0.251 Sum_probs=73.7
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC--C------------------------
Q 025000 167 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG--D------------------------ 217 (259)
Q Consensus 167 ~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~--g------------------------ 217 (259)
++.+.+.+.. ....+.+++++||+.++. |+|...|.+||++|+|++.+- |
T Consensus 48 ~~~~~~~~~~l~~~gvs~~r~~i~pggl~~P-h~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q 126 (459)
T 2e9q_A 48 TEVWDQDNDEFQCAGVNMIRHTIRPKGLLLP-GFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQ 126 (459)
T ss_dssp EEECCTTSHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEEC
T ss_pred EEecCCCChhhccCceEEEEEEEcCCCEecc-eecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccc
Confidence 4445554422 257888999999999975 667899999999999999884 2
Q ss_pred EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecC
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 255 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~n 255 (259)
+.+.|++||++++|+|.+||++|+|+++|++|+..|.+
T Consensus 127 ~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~ 164 (459)
T 2e9q_A 127 KIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTR 164 (459)
T ss_dssp CCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESS
T ss_pred eeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCC
Confidence 36799999999999999999999999999999998854
No 126
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=99.18 E-value=2.6e-11 Score=98.24 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=71.9
Q ss_pred eccCCCCCCcccC----CceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEE--EEc
Q 025000 149 VGSTDKQPLLETP----GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW--YPV 222 (259)
Q Consensus 149 v~~~~di~~~~~~----g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~--~~v 222 (259)
+.+.+++++++.. ..++.++.|...+. ....+++++++||+.+|. |+|..+|.+|||+|+..+..++.. .++
T Consensus 11 ~i~~~~~~W~~~p~~~~~~Gv~~~~L~~~~~-~g~~~~~~~~~pG~~~p~-H~H~~~ee~~VL~G~~~~~~g~~~~~~~~ 88 (145)
T 2o1q_A 11 YVQMDQVDWKPFPAAFSTGGIRWKLLHVSPE-MGSWTAIFDCPAGSSFAA-HVHVGPGEYFLTKGKMDVRGGKAAGGDTA 88 (145)
T ss_dssp CCCGGGSCCEECCGGGEESCCEEEEEEEETT-TTEEEEEEEECTTEEECC-EEESSCEEEEEEEEEEEETTCGGGTSEEE
T ss_pred EEccccCccEeCCcccCCCCcEEEEeeECCC-cccEEEEEEECCCCCCCc-cCCCCCEEEEEEEeEEEEcCCCEecceEe
Confidence 3445678888874 45667777753221 123578999999999997 677677779999999998766665 899
Q ss_pred cCCcEEEeCCCCcee-EEeCCCccEEEE
Q 025000 223 QAGDVLWMAPFVPQW-YAALGKTRTRYL 249 (259)
Q Consensus 223 ~~GD~i~~~~~~~H~-~~n~G~e~~~fi 249 (259)
++||++++++|..|+ ..+ .++++++
T Consensus 89 ~~Gd~~~~p~g~~H~p~~~--~e~~~~l 114 (145)
T 2o1q_A 89 IAPGYGYESANARHDKTEF--PVASEFY 114 (145)
T ss_dssp ESSEEEEECTTCEESCCEE--EEEEEEE
T ss_pred CCCEEEEECcCCccCCeEC--CCCeEEE
Confidence 999999999999999 443 3444444
No 127
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.18 E-value=7.3e-11 Score=109.21 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=74.6
Q ss_pred cceEEEEecCCCC--CcEEEEEEEecCCCcCCCCCCCc-eEEEEEEECEEEEEEcC-----CcEEEEeCCcEEEeCCCCc
Q 025000 48 NTLGAYLITPAMG--SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNAS-----GVSSKLMVDSYTYLPPNFA 119 (259)
Q Consensus 48 ~~~~~~l~sp~~g--~~f~~~~~~l~Pg~~~~~h~~~~-Eef~yVl~G~l~v~v~~-----ge~~~L~~Gd~i~~p~~~~ 119 (259)
+...+++.++..+ ..+.+++++++||+..+.|.|.. +|++||++|++++++ + ++++.|++||+++||++.+
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i-~~~~g~~~~~~l~~GD~~~ip~~~~ 318 (385)
T 1j58_A 240 GGKVYIADSTNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTV-FASDGHARTFNYQAGDVGYVPFAMG 318 (385)
T ss_dssp SEEEEEESTTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEE-EEETTEEEEEEEESSCEEEECTTCB
T ss_pred CceEEEeecccCCcccceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEE-EcCCCcEEEEEEcCCCEEEECCCCe
Confidence 3455666666554 37999999999999887786766 999999999999999 7 7899999999999999999
Q ss_pred EEEEe--CCeEEEEEEEEe
Q 025000 120 HSLRA--EGSATLVVFERR 136 (259)
Q Consensus 120 H~~~N--~~~a~~l~v~~~ 136 (259)
|+++| +++++++++..+
T Consensus 319 H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 319 HYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEECSSSCEEEEEEESS
T ss_pred EEEEECCCCCEEEEEEECC
Confidence 99999 568999888643
No 128
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.18 E-value=1e-10 Score=92.43 Aligned_cols=73 Identities=8% Similarity=0.148 Sum_probs=60.3
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~ 134 (259)
..+...+.++.||... .|.|..+|++|||+|++++++.+|+++.|++||+++||+|.+|+|+|.+++|-+++.
T Consensus 47 g~~~~g~w~~~pG~~~-~~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 47 GKVESGVWESTSGSFQ-SNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFV 119 (123)
T ss_dssp TTEEEEEEEEEEEEEE-CCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred CCEEEEEEEECCCcee-eEcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEE
Confidence 4677788888898644 455556999999999999997467889999999999999999999997767665554
No 129
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.18 E-value=6.2e-11 Score=113.28 Aligned_cols=91 Identities=14% Similarity=0.235 Sum_probs=75.7
Q ss_pred CCceEEEEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC--------------------
Q 025000 161 PGEVFQLRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-------------------- 217 (259)
Q Consensus 161 ~g~~~~~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g-------------------- 217 (259)
++|. +..+.+.+.. ....+.+++++||+.++. |+|.+.|.+||++|+|++.+-.
T Consensus 29 e~G~--~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~P-h~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~ 105 (476)
T 1fxz_A 29 EGGL--IETWNPNNKPFQCAGVALSRCTLNRNALRRP-SYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSS 105 (476)
T ss_dssp TTEE--EEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EEESSCEEEEEEECCEEEEEECTTCCCC--------------
T ss_pred CCce--EEeeCCCChhhccCceEEEEEEEcCCCEecc-eecCCceEEEEEecEEEEEEEcCCCcchhhcccccccccccc
Confidence 4443 4446665433 257888999999999975 6778999999999999988874
Q ss_pred -------EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeec
Q 025000 218 -------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 254 (259)
Q Consensus 218 -------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~ 254 (259)
+.+.|++||++++|+|..||++|+|+++|++|+.=|.
T Consensus 106 ~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~ 149 (476)
T 1fxz_A 106 RPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDT 149 (476)
T ss_dssp ----CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 4789999999999999999999999999999988764
No 130
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.18 E-value=7.4e-11 Score=113.16 Aligned_cols=88 Identities=15% Similarity=0.208 Sum_probs=74.4
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC---------------------------
Q 025000 167 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG--------------------------- 216 (259)
Q Consensus 167 ~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~--------------------------- 216 (259)
+..+.+.+.. .++++..++++||+.+.. |+|...+.+||++|+|++.+-
T Consensus 30 ~e~~~~~~~~l~~~gv~~~r~~i~pggl~~P-h~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~ 108 (493)
T 2d5f_A 30 IETWNSQHPELQCAGVTVSKRTLNRNGLHLP-SYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQ 108 (493)
T ss_dssp EEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CS
T ss_pred EEEeCCCChhhccCCEEEEEEEeCCCcEeCc-eecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccc
Confidence 4445554322 358899999999999975 677889999999999999877
Q ss_pred ---CEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecC
Q 025000 217 ---DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 255 (259)
Q Consensus 217 ---g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~n 255 (259)
.+.+.|++||++++|+|.+||+.|+|+++|++||.=|.+
T Consensus 109 d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~ 150 (493)
T 2d5f_A 109 DSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTS 150 (493)
T ss_dssp EEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTT
T ss_pred cccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCc
Confidence 157899999999999999999999999999999987754
No 131
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.17 E-value=6e-11 Score=90.53 Aligned_cols=64 Identities=8% Similarity=0.075 Sum_probs=53.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcC-CcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF 133 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~-ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v 133 (259)
..++.||... .| |..+|++|||+|++++++ + |+++.|++||+++||+|.+|+++|.++++.+++
T Consensus 35 ~~~~~pg~~~-~h-H~~~E~~~Vl~G~~~~~i-~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv 99 (101)
T 1o5u_A 35 IWEKEVSEFD-WY-YDTNETCYILEGKVEVTT-EDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYN 99 (101)
T ss_dssp EEEECSEEEE-EE-CSSCEEEEEEEEEEEEEE-TTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred EEEeCCCccc-cc-CCceEEEEEEeCEEEEEE-CCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEEE
Confidence 4456676432 33 678999999999999999 8 999999999999999999999999776666655
No 132
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.16 E-value=7e-11 Score=113.51 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=76.3
Q ss_pred EEEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC-------------------------
Q 025000 166 QLRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD------------------------- 217 (259)
Q Consensus 166 ~~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g------------------------- 217 (259)
.+..+.+.+.. ..+++.+++++||+.+.. |+|.+.+.+||++|+|++.+-.
T Consensus 32 ~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lP-h~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~ 110 (510)
T 3c3v_A 32 YIETWNPNNQEFECAGVALSRLVLRRNALRRP-FYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRR 110 (510)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC------------
T ss_pred eEEEeCCCCcccccCcEEEEEEEECCCCCccc-eecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccc
Confidence 34556665432 468899999999999875 6778889999999999998874
Q ss_pred ---------------EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecCC
Q 025000 218 ---------------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 256 (259)
Q Consensus 218 ---------------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~nr 256 (259)
+.+.|++||+|++|+|++||++|.|+++|++|+..|.+-
T Consensus 111 ~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 111 LQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp --------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred ccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 247999999999999999999999999999999998763
No 133
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.15 E-value=9.6e-11 Score=109.57 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=69.5
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe----CCEEEEccCCcE------EEeCCCCceeEEeCC-CccE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDV------LWMAPFVPQWYAALG-KTRT 246 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~----~g~~~~v~~GD~------i~~~~~~~H~~~n~G-~e~~ 246 (259)
++.+.+++++||+..+. |+|..+|.+|||+|+|++.+ +...+.|++||+ +++|+|..|++.|+| +++|
T Consensus 51 ~~s~~~~~l~pgg~~~p-h~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l 129 (397)
T 2phl_A 51 DYRLVEFRSKPETLLLP-QQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDL 129 (397)
T ss_dssp TCEEEEEEECSSEEEEE-EEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCE
T ss_pred cEEEEEEEECCCcCccC-EecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCe
Confidence 48999999999999875 66788899999999999998 678999999999 999999999999999 8999
Q ss_pred EEEEEeec
Q 025000 247 RYLLYKDV 254 (259)
Q Consensus 247 ~fi~~k~~ 254 (259)
++|++.|.
T Consensus 130 ~~i~~~~~ 137 (397)
T 2phl_A 130 RIIQLAMP 137 (397)
T ss_dssp EEEEEEEE
T ss_pred EEEEeecC
Confidence 99988663
No 134
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=99.15 E-value=1.5e-09 Score=96.13 Aligned_cols=186 Identities=15% Similarity=0.169 Sum_probs=120.8
Q ss_pred CCCcCCCCCCCceEEEEEEECEEEEEEcC-C--cEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEeccccC--C----
Q 025000 72 ENARSALPPHDVERFIFVVQGSAMLTNAS-G--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLE--N---- 142 (259)
Q Consensus 72 Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~-g--e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~y~p~~--g---- 142 (259)
|+.+...|+.+.+|++|+++|.+.+.+.+ | +...|++||.+.+|+|++|+-...+.+..|+++++=.+.. +
T Consensus 40 pN~R~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r~~et~gLviE~~R~~~~~D~l~wy 119 (286)
T 2qnk_A 40 PNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVVERRRLETELDGLRYY 119 (286)
T ss_dssp CBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEECCCTTCCEEEEEE
T ss_pred CCcCccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcccCCeEEEEEeecCCCCCccceEEE
Confidence 33346677778999999999999999833 3 2689999999999999999987766778888875532211 0
Q ss_pred ---CCc--ceeeccCCCC------------------------------CCcccCCce----EEEE-Eee-------CC--
Q 025000 143 ---HIT--EQIVGSTDKQ------------------------------PLLETPGEV----FQLR-KLL-------PQ-- 173 (259)
Q Consensus 143 ---~~p--~~~v~~~~di------------------------------~~~~~~g~~----~~~~-~l~-------p~-- 173 (259)
... ........|+ |+-+.+... +-++ ||. ..
T Consensus 120 c~~c~~~~~e~~f~~~dl~~ql~~~~~~f~~~~~~rtc~p~~~~~~~~~p~~~~~~~~~~pf~Lk~Wl~~h~~ei~s~~~ 199 (286)
T 2qnk_A 120 VGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPFPLSTRSIMEPMSLDAWLDSHHRELQAGTP 199 (286)
T ss_dssp STTSSSEEEEEEECCSSHHHHHHHHHHHHHTSHHHHHSCCCGGGSCSSCSSCCCCCCCCCCEEHHHHHHHTHHHHHTTCC
T ss_pred cCCCCCEEEEEEEEEechHHhhHHHHHHHhcCcccccCCCChhhcccCCCCCCccccccCCcCHHHHHHhhhHHHhcCCc
Confidence 000 0001111111 111111111 1111 221 11
Q ss_pred -CCC-cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 174 -AVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 174 -~~~-~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
++. ..+-+.++-+-+|.+.... .-. +--+++|||+-.+++||..+.+++||.+.++++..|.+....+.-+-+|.-
T Consensus 200 ~sLFg~~~eteV~l~G~Ges~~~~-~~~-d~wiWqLEGss~Vt~~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~~ 277 (286)
T 2qnk_A 200 LSLFGDTYETQVIAYGQGSSEGLR-QNV-DVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQ 277 (286)
T ss_dssp EESSCTTSSEEEEEECSEEEEECC-CSS-CEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEE
T ss_pred cccccCCCceEEEEEcCCcccccc-CcC-cEEEEEEcCceEEEECCeEEeccCCCEEEecCCCeEEEEecCCeEEEEEEE
Confidence 121 2444566668888876542 222 344899999999999999999999999999999999999876666666666
Q ss_pred eecCCCCC
Q 025000 252 KDVNRNPL 259 (259)
Q Consensus 252 k~~nr~~~ 259 (259)
+.-++.|+
T Consensus 278 ~p~~~~~~ 285 (286)
T 2qnk_A 278 DPACKKPL 285 (286)
T ss_dssp CGGGCCSC
T ss_pred CccccCCC
Confidence 65555543
No 135
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.15 E-value=2.7e-10 Score=84.89 Aligned_cols=59 Identities=14% Similarity=0.240 Sum_probs=53.6
Q ss_pred cCCCCCCCc-eEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEE
Q 025000 75 RSALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 75 ~~~~h~~~~-Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~ 134 (259)
..+.|.|.. .|++||++|++++.+ +++++.|++||++++|+|.+|+++|.++++++++.
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~i~ 100 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAF-RDQNITLQAGEMYVIPKGVEHKPMAKEECKIMIIE 100 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEEC-SSCEEEEETTEEEEECTTCCBEEEEEEEEEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEE-CCEEEEEcCCCEEEECCCCeEeeEcCCCCEEEEEE
Confidence 456777776 999999999999999 99999999999999999999999997788888875
No 136
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=99.14 E-value=1e-08 Score=90.87 Aligned_cols=172 Identities=15% Similarity=0.136 Sum_probs=121.8
Q ss_pred EEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEE-e-C--------CcEEEeCCCCcEEEEeCCeEEEEE
Q 025000 63 FVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKL-M-V--------DSYTYLPPNFAHSLRAEGSATLVV 132 (259)
Q Consensus 63 f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L-~-~--------Gd~i~~p~~~~H~~~N~~~a~~l~ 132 (259)
....+..|++|.+......+.|-.++.|.|.++|++ +|+++.+ . . .|++|+|.|..-++.+.++++|.+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~-~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~~~~~v 107 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDERERCLVLVAGLASVXA-ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLELAV 107 (270)
T ss_dssp CEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEE-TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEEEE
T ss_pred eEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEE-CCEEEeccccccccccCCCCcEEEECCCCEEEEEecCCceEEE
Confidence 455678889998776666778889999999999999 9999977 3 2 499999999999999877899999
Q ss_pred EEEeccccCCCCcceeeccCCCCCCcccC-C-ceEEEEEeeCCCCCcceEEEEEEecCCccc---Ccceeecc-------
Q 025000 133 FERRYASLENHITEQIVGSTDKQPLLETP-G-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFL---NVKEVHYN------- 200 (259)
Q Consensus 133 v~~~y~p~~g~~p~~~v~~~~di~~~~~~-g-~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~---~~~~~H~~------- 200 (259)
...+ .++.-|..++. .+|++..... | -...++.+++.+...+..+-..+|.||+.- |. |+|..
T Consensus 108 ~sAp---~~~~~p~r~i~-~~d~~~~~rG~g~n~R~V~~i~~~~~~a~~LlvgEv~tpgG~WSSyPp-HkHd~~~~~~e~ 182 (270)
T 2qjv_A 108 CSAP---GFGELPVRLIS-PQEVGVEHRGXGRNQRLVHNILPDSQLADSLLVVEVYTNAGATSSWPA-HXHDTAVEGQET 182 (270)
T ss_dssp EEEE---CCSCCCCEEEC-GGGSEEEEESSGGGCEEEEEEECTTSCCSSCEEEEEEECTTCEESCSC-EECEEEETTTEE
T ss_pred Eeee---cCCcCCcEEEC-HHHCCeEeccCccchhhhhhhcCCCCCcceEEEEEEEcCCCccccCCC-cccccccCcccc
Confidence 8765 34333444443 4566555553 2 222454555444434433334447788764 64 67764
Q ss_pred --ceEEEE-EE---ceEEEEe------CCEEEEccCCcEEEeCCCCceeEEeC
Q 025000 201 --QHGLLL-LE---GQGIYRL------GDSWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 201 --eh~~~i-l~---G~g~~~~------~g~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
||+||. +. |-|.-++ .++.+.|+-||++.+|+|- |...+.
T Consensus 183 ~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp~~a~ 234 (270)
T 2qjv_A 183 YLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-HPVATI 234 (270)
T ss_dssp ECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-CCEEEC
T ss_pred cceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-CCCcCC
Confidence 288866 43 5666655 5789999999999999998 985544
No 137
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.13 E-value=1.5e-10 Score=98.40 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=64.8
Q ss_pred CCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcC-----Cc--EEEEeCCcEEEeCCCCcEEEEe--CCeEE
Q 025000 60 GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNAS-----GV--SSKLMVDSYTYLPPNFAHSLRA--EGSAT 129 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~-----ge--~~~L~~Gd~i~~p~~~~H~~~N--~~~a~ 129 (259)
+..+.+.+++++||+..+.|.|. .+|++||++|++++.+.+ ++ ++.|++||.++||+|..|.++| +++++
T Consensus 69 ~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~ 148 (201)
T 1fi2_A 69 TLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAY 148 (201)
T ss_dssp TSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEE
T ss_pred cCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEE
Confidence 35789999999999988888666 589999999999998822 56 8999999999999999999999 55788
Q ss_pred EEEEE
Q 025000 130 LVVFE 134 (259)
Q Consensus 130 ~l~v~ 134 (259)
++++.
T Consensus 149 ~l~v~ 153 (201)
T 1fi2_A 149 MVVSF 153 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88874
No 138
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.13 E-value=2.5e-10 Score=88.22 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=54.2
Q ss_pred cCCcccCcc--eeeccceEEEEEEceEEEEeCCEE--EEccCCcEEEeCCCCceeEEeCCCc-cEEEEE
Q 025000 187 QPGDFLNVK--EVHYNQHGLLLLEGQGIYRLGDSW--YPVQAGDVLWMAPFVPQWYAALGKT-RTRYLL 250 (259)
Q Consensus 187 ~PG~~~~~~--~~H~~eh~~~il~G~g~~~~~g~~--~~v~~GD~i~~~~~~~H~~~n~G~e-~~~fi~ 250 (259)
.+|..++.. ++|..+|.+|||+|++.+.++|+. +.+++||.++++++++|.+.|+|++ ++.+|+
T Consensus 38 ~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~ 106 (112)
T 2opk_A 38 SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLA 106 (112)
T ss_dssp ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEE
T ss_pred eCCccCCCCccccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEE
Confidence 456555442 567777999999999999999999 9999999999999999999999986 666554
No 139
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.11 E-value=5.7e-11 Score=89.97 Aligned_cols=74 Identities=8% Similarity=0.067 Sum_probs=61.7
Q ss_pred CcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEEcCC---cEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASG---VSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 134 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v~~g---e~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~ 134 (259)
..+.+.+++++||++.+.|.|. .+++++|++|+++++. ++ ++..|++||++|+|+|..|++.| +.++.|+-|.
T Consensus 15 ~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~-~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeVE 93 (98)
T 3lag_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA-PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC-TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEEE
T ss_pred CeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe-CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEEE
Confidence 4688899999999999999654 5678888999999998 55 34579999999999999999999 6688888775
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
-
T Consensus 94 ~ 94 (98)
T 3lag_A 94 L 94 (98)
T ss_dssp E
T ss_pred E
Confidence 3
No 140
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=99.10 E-value=6.5e-09 Score=90.73 Aligned_cols=174 Identities=13% Similarity=0.097 Sum_probs=117.0
Q ss_pred cCCCCCcceEEE-EecCCCCCcEEEEEEEecCCCcCCCC--CCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCC
Q 025000 42 PLPEWTNTLGAY-LITPAMGSHFVMYLANMQENARSALP--PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNF 118 (259)
Q Consensus 42 ~lp~~~~~~~~~-l~sp~~g~~f~~~~~~l~Pg~~~~~h--~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~ 118 (259)
.+|+-.....+. |.-+..|+ +-.++.++|+-..+.. +.+.| +|||+|++. + ||. .|.++++.++|+|+
T Consensus 71 ~~p~~~~~gs~RlLs~~d~Ga--STl~V~fpp~~~~P~Gi~~ad~E--~fVL~G~i~--~-G~~--~l~~h~Y~f~PaGV 141 (303)
T 2qdr_A 71 GMPDNIAPGSRRLLTWHDSGA--STSRVVLPPKFEAPSGIFTADLE--IFVIKGAIQ--L-GEW--QLNKHSYSFIPAGV 141 (303)
T ss_dssp TSCTTSCCEEEEEEEECTTSC--EEEEEEECTTCEECCBEESSCEE--EEEEESEEE--E-TTE--EECTTEEEEECTTC
T ss_pred CCCCCcCccceeecccCCCCc--ceEEEEecCCCCCCCcccccceE--EEEEEeEEE--e-CCE--EecCCceEEecCCC
Confidence 344433333344 44444454 4467888998776554 34444 899999887 6 554 69999999999999
Q ss_pred cEEE-Ee--CCeEEEEEEEEe-----ccccCCCCccee------eccCCCCCCcccC--C-ceEEEEEeeCCCCCcceEE
Q 025000 119 AHSL-RA--EGSATLVVFERR-----YASLENHITEQI------VGSTDKQPLLETP--G-EVFQLRKLLPQAVPFDFNI 181 (259)
Q Consensus 119 ~H~~-~N--~~~a~~l~v~~~-----y~p~~g~~p~~~------v~~~~di~~~~~~--g-~~~~~~~l~p~~~~~~~~~ 181 (259)
.--. +- .+++++||+..= |...+...|.+- +-+-+.+++...+ + ..+.+++|..+.. ....
T Consensus 142 ~~~~~kv~~~~g~~iL~fe~g~~pl~y~~a~~d~P~Ar~~d~I~v~Ds~~L~W~~t~~p~f~~~~~K~Lr~D~~--G~~T 219 (303)
T 2qdr_A 142 RIGSWKVLGGEEAEILWMENGSVPLEYKYAQEDHPDARLSDFIPALDSKLLPWGKADTVQFVQANKKWLRKDIN--GGGV 219 (303)
T ss_dssp CBCCEEEETTSCEEEEEEECSSSCCCEECCSSCCTTCCGGGCEEEEEGGGSCCEECSSSTTCSEEEEEEEECTT--SCEE
T ss_pred ccCceeecCCCCcEEEEEecCCccccccccccCCcchhhcccceecccccCCcccCCCCCccHHHHHHhhcCCC--CCeE
Confidence 7753 34 779999999221 122222223322 3334445565543 3 3445666654433 5557
Q ss_pred EEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCcee
Q 025000 182 HIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQW 237 (259)
Q Consensus 182 ~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~ 237 (259)
+.+.+.||.-....-+|..-|+.|+|+|.. .+|++.|-+|+++|+
T Consensus 220 rLlr~~Pg~dt~~v~iHdy~EEvY~LeG~~-----------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 220 WLLAILPHFDNKYQMIQPYNEEGYCLTGYC-----------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EEEEECSSEECCSEEEECSCEEEEEEEEEE-----------EETTEEEETTEEEEE
T ss_pred EEEEECCCCCCCCceeeccceeEEEEeeec-----------cCceeeEcCCCCccC
Confidence 788999998888888998889999999976 669999999999999
No 141
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=99.09 E-value=4.7e-10 Score=92.38 Aligned_cols=99 Identities=10% Similarity=0.067 Sum_probs=76.7
Q ss_pred eccCCCCCCcccC--CceEEEEEee-CCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCC
Q 025000 149 VGSTDKQPLLETP--GEVFQLRKLL-PQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAG 225 (259)
Q Consensus 149 v~~~~di~~~~~~--g~~~~~~~l~-p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~G 225 (259)
+.+.+++++++.. ++++.++.|. ..+. ...++++.++||+.+|. |+|...+.+|||+|+..|..+| ..+++|
T Consensus 11 ~v~~~~~~W~~~~~~~~Gv~~~~L~~d~~~--g~~v~lvr~~pG~~~p~-H~H~g~ee~~VL~G~~~~~e~~--~~~~~G 85 (159)
T 3ebr_A 11 CLDGNDTPWMPFAPYSNDVMVKYFKIDPVR--GETITLLKAPAGMEMPR-HHHTGTVIVYTVQGSWRYKEHD--WVAHAG 85 (159)
T ss_dssp CCCGGGSCCEECTTTCSSSEEEEEEEETTT--TEEEEEEEECSSCBCCC-EEESSCEEEEEEESCEEETTSS--CCBCTT
T ss_pred EEcCCcCCcEeCCCCCCCEEEEEeeEcCCC--CeEEEEEEECCCCCccc-ccCCCCEEEEEEEeEEEEeCCC--eEECCC
Confidence 3456778888842 3556677664 2222 36788999999999997 6776678899999999875443 489999
Q ss_pred cEEEeCCCCceeEEeC--CCccEEEEEEe
Q 025000 226 DVLWMAPFVPQWYAAL--GKTRTRYLLYK 252 (259)
Q Consensus 226 D~i~~~~~~~H~~~n~--G~e~~~fi~~k 252 (259)
|+++.++|..|+..+. +++++..+.-|
T Consensus 86 d~~~~P~g~~H~~~~~~~~~e~~~~~~~~ 114 (159)
T 3ebr_A 86 SVVYETASTRHTPQSAYAEGPDIITFNIV 114 (159)
T ss_dssp CEEEECSSEEECEEESSSSSSCEEEEEEE
T ss_pred eEEEECCCCcceeEeCCCCCCCEEEEEEe
Confidence 9999999999999999 88999877644
No 142
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.08 E-value=7.6e-10 Score=90.84 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=62.6
Q ss_pred EEEecCCCCCcEEEEEEEecCCCcCCCCCC-CceEEEEEEE--CEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeE
Q 025000 52 AYLITPAMGSHFVMYLANMQENARSALPPH-DVERFIFVVQ--GSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSA 128 (259)
Q Consensus 52 ~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~-~~Eef~yVl~--G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a 128 (259)
+.+..+..+-.+..+++++ ++....|.| ..+|++|||+ |++++++ +|+++.|++||++++|+|+.|++++ ++
T Consensus 36 rR~l~~~~~fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i-dge~~~l~~GD~v~IPpg~~H~i~g--~l 110 (157)
T 4h7l_A 36 QRAFGHDAGTSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL-NGQSYPLTKLLAISIPPLVRHRIVG--EA 110 (157)
T ss_dssp EEESCGGGCCSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE-TTEEEECCTTEEEEECTTCCEEEES--CE
T ss_pred eEEeEcCCCCcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE-CCEEEEeCCCCEEEECCCCeEeeEC--CE
Confidence 4445444444455555554 445566755 5789999999 9999999 9999999999999999999999985 79
Q ss_pred EEEEEEEe
Q 025000 129 TLVVFERR 136 (259)
Q Consensus 129 ~~l~v~~~ 136 (259)
++|++..+
T Consensus 111 ~~L~I~~P 118 (157)
T 4h7l_A 111 TIINIVSP 118 (157)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 99998654
No 143
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.07 E-value=2.1e-10 Score=87.02 Aligned_cols=66 Identities=15% Similarity=0.145 Sum_probs=54.8
Q ss_pred EEEecCCcccCcceeecc-ceEEEEEEceEEEEeCC-EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 183 IMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGD-SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 183 ~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~g-~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
.+++.||. .+. |.|.. +|.+|||+|++.+.++| +.+.+++||++++++|++|++.|. +++++|++.
T Consensus 32 ~~~~~~g~-~~~-H~H~~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i~ 99 (107)
T 2i45_A 32 HLVKLLGD-YGW-HTHGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSE--NGCSLVLIE 99 (107)
T ss_dssp EEEEEEEE-CCC-BCC--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEEE--EEEEEEEEE
T ss_pred EEEECCCC-Ccc-eeCCCCCEEEEEEeCEEEEEECCCcEEEECCCCEEEECCCCcEeeEeC--CCeEEEEEE
Confidence 45667886 454 67776 89999999999999999 999999999999999999999995 567777653
No 144
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.01 E-value=1.8e-09 Score=80.31 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=55.5
Q ss_pred EEEEEEecCCcccCcceeecc-ceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEe
Q 025000 180 NIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~-eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
.+++..+. +..+. |.|.. .|.+||++|++.+.++|+.+.+++||++++++|.+|++.|.+ ++++|+..
T Consensus 32 ~~~~~~~~--~~~~~-H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~i~ 100 (102)
T 3d82_A 32 QFKLVKVE--GEFVW-HEHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAKE--ECKIMIIE 100 (102)
T ss_dssp EEEEEEEE--EECCC-BCCTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEEEE--EEEEEEEE
T ss_pred EEEEEEEC--CCCCc-eeCCCCcEEEEEEeCEEEEEECCEEEEEcCCCEEEECCCCeEeeEcCC--CCEEEEEE
Confidence 34444443 45665 56766 899999999999999999999999999999999999999984 66776653
No 145
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.00 E-value=1.1e-09 Score=104.07 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=73.5
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe--CC------------------------
Q 025000 167 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL--GD------------------------ 217 (259)
Q Consensus 167 ~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~--~g------------------------ 217 (259)
++.+++.+.. ...++.+++++||+.++. |.|...+.+||++|+|++.+ .|
T Consensus 35 ~e~~d~~~~~l~~~gvs~~R~~i~P~gl~~P-h~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~ 113 (465)
T 3qac_A 35 TEVWDSNEQEFRCAGVSVIRRTIEPHGLLLP-SFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQG 113 (465)
T ss_dssp EEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEEECTTCCCCC-------------------
T ss_pred EEEECCCChhhcccceEEEEEEEcCCcCccc-EEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccc
Confidence 4556665422 368888999999999986 56688899999999998874 21
Q ss_pred ----------------EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecC
Q 025000 218 ----------------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 255 (259)
Q Consensus 218 ----------------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~n 255 (259)
+.+.+++||++++|+|..||++|+|++||++|+.=|.+
T Consensus 114 ~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~ 167 (465)
T 3qac_A 114 SRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTA 167 (465)
T ss_dssp -----------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTT
T ss_pred ccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCC
Confidence 25689999999999999999999999999999998875
No 146
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.99 E-value=1.8e-09 Score=99.30 Aligned_cols=83 Identities=10% Similarity=-0.009 Sum_probs=61.9
Q ss_pred EEEee-CCCCCcceEEEEEEecCCcccCc--ceeec-cceEEEEEEceEEEEeCC-----EEEEccCCcEEEeCCCCcee
Q 025000 167 LRKLL-PQAVPFDFNIHIMDFQPGDFLNV--KEVHY-NQHGLLLLEGQGIYRLGD-----SWYPVQAGDVLWMAPFVPQW 237 (259)
Q Consensus 167 ~~~l~-p~~~~~~~~~~~~t~~PG~~~~~--~~~H~-~eh~~~il~G~g~~~~~g-----~~~~v~~GD~i~~~~~~~H~ 237 (259)
.+.++ +...+..+.+. .++.|++..+. .|.|. .+|.+|||+|++.+.++| +++.+++||+++++++.+|+
T Consensus 35 ~~~l~~~~~~~~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~ 113 (350)
T 1juh_A 35 YRFYVTGPSSGYAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHT 113 (350)
T ss_dssp EEEEECHHHHTTSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEE
T ss_pred EEEEecCCCCCCcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEE
Confidence 44444 43333333333 44556655442 25554 779999999999999999 99999999999999999999
Q ss_pred EEeCCCccEEEEEE
Q 025000 238 YAALGKTRTRYLLY 251 (259)
Q Consensus 238 ~~n~G~e~~~fi~~ 251 (259)
+.|.|+++ ++|+.
T Consensus 114 ~~n~~~~~-~~l~v 126 (350)
T 1juh_A 114 FQIQDPDT-EMTGV 126 (350)
T ss_dssp EEECSTTE-EEEEE
T ss_pred EEeCCCCC-EEEEE
Confidence 99999887 77764
No 147
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.98 E-value=2.7e-09 Score=88.41 Aligned_cols=105 Identities=16% Similarity=0.154 Sum_probs=78.1
Q ss_pred ceeeccCCCCCCcccCC--ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEcc
Q 025000 146 EQIVGSTDKQPLLETPG--EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQ 223 (259)
Q Consensus 146 ~~~v~~~~di~~~~~~g--~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~ 223 (259)
..+..+.+++++++..+ +++.++.|.-.. .....++++.++||+.+|. |.|...+..|||+|...+. ++..+.++
T Consensus 9 ~~v~v~~~~~~W~~~~~~~~GV~~~~L~~~~-~~g~~v~lvr~~pG~~~p~-H~H~g~ee~~VL~G~f~~~-~~~~~~~~ 85 (165)
T 3cjx_A 9 KLLTVDTTAHPFLKALGGHEGTDIFPLFMDP-YNGLMVMRASFAPGLTLPL-HFHTGTVHMYTISGCWYYT-EYPGQKQT 85 (165)
T ss_dssp SCEEEETTSSCCBCSGGGCTTEEEEEEEEET-TTTEEEEEEEECTTCBCCE-EEESSCEEEEEEESEEEET-TCTTSCEE
T ss_pred ceEEEccccCCcEECCCCCCCEEEEEeEeCC-CCCcEEEEEEECCCCcCCc-ccCCCCEEEEEEEEEEEEC-CCceEEEC
Confidence 34566788899988742 456677664221 1235688999999999996 7888889999999998873 22257889
Q ss_pred CCcEEEeCCCCceeEEeCC--CccEEEEEEee
Q 025000 224 AGDVLWMAPFVPQWYAALG--KTRTRYLLYKD 253 (259)
Q Consensus 224 ~GD~i~~~~~~~H~~~n~G--~e~~~fi~~k~ 253 (259)
+||+++.++|..|+..+.. ++++..|+-|+
T Consensus 86 aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 86 AGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp TTEEEEECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred CCeEEEeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 9999999999999999975 34775555444
No 148
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.96 E-value=1.5e-09 Score=85.64 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=60.6
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe-CCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-GDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~-~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
.+.+.+.+++||... . |.|..+|.+|||+|++.+++ ||+.+.+++||++++++|.+|.++|.++..-.|++|
T Consensus 48 ~~~~g~w~~~pG~~~-~-~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~~ 120 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-S-NTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFVT 120 (123)
T ss_dssp TEEEEEEEEEEEEEE-C-CCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-e-EcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEEE
Confidence 456668888899865 2 34433799999999999999 999999999999999999999999998877677665
No 149
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.85 E-value=2.9e-09 Score=86.04 Aligned_cols=84 Identities=14% Similarity=0.106 Sum_probs=65.1
Q ss_pred CcceEEEEecC-CCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE--EEEeCCcEEEeCCCCcEE-E
Q 025000 47 TNTLGAYLITP-AMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS--SKLMVDSYTYLPPNFAHS-L 122 (259)
Q Consensus 47 ~~~~~~~l~sp-~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~--~~L~~Gd~i~~p~~~~H~-~ 122 (259)
.+....+|... ..|. .+.+++++||+..+.|.|.++|.+|||+|+++... ++.. +++++||+++.|+|..|+ .
T Consensus 29 ~Gv~~~~L~~~~~~g~--~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~-g~~~~~~~~~~Gd~~~~p~g~~H~p~ 105 (145)
T 2o1q_A 29 GGIRWKLLHVSPEMGS--WTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRG-GKAAGGDTAIAPGYGYESANARHDKT 105 (145)
T ss_dssp SCCEEEEEEEETTTTE--EEEEEEECTTEEECCEEESSCEEEEEEEEEEEETT-CGGGTSEEEESSEEEEECTTCEESCC
T ss_pred CCcEEEEeeECCCccc--EEEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcC-CCEecceEeCCCEEEEECcCCccCCe
Confidence 45666777543 3342 35678999999999997766777999999999775 6666 899999999999999999 6
Q ss_pred EeCCeEEEEEE
Q 025000 123 RAEGSATLVVF 133 (259)
Q Consensus 123 ~N~~~a~~l~v 133 (259)
.+.+.+.++.+
T Consensus 106 ~~~e~~~~l~~ 116 (145)
T 2o1q_A 106 EFPVASEFYMS 116 (145)
T ss_dssp EEEEEEEEEEE
T ss_pred ECCCCeEEEEE
Confidence 55566766655
No 150
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.83 E-value=8.9e-09 Score=98.56 Aligned_cols=89 Identities=11% Similarity=0.193 Sum_probs=72.9
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---C-CE---------------------
Q 025000 167 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---G-DS--------------------- 218 (259)
Q Consensus 167 ~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~-g~--------------------- 218 (259)
+..+.+.... ....+.+++++||+.++. |+|...+.+||++|+|.+.+ + .+
T Consensus 31 ~e~~~~~~~~L~~~gvs~~R~~i~pggl~lP-h~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~q 109 (496)
T 3ksc_A 31 IETWNPNNKQFRCAGVALSRATLQRNALRRP-YYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQ 109 (496)
T ss_dssp EEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCC
T ss_pred EEeccccchhhccCCceEEEEEecCCCEeCc-eEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchh
Confidence 3444544322 368889999999999876 56688899999999998887 3 22
Q ss_pred -EEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecCC
Q 025000 219 -WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 256 (259)
Q Consensus 219 -~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~nr 256 (259)
.+.+++||++.+|+|..||+.|.|+++++.|+.=|+|-
T Consensus 110 k~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n 148 (496)
T 3ksc_A 110 KVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRS 148 (496)
T ss_dssp CEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTC
T ss_pred eeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCc
Confidence 45999999999999999999999999999999887763
No 151
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.83 E-value=1.1e-08 Score=84.72 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=74.8
Q ss_pred ceEEECCCCceeccCCC-CCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEe
Q 025000 29 DHALITPESHVLSPLPE-WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLM 107 (259)
Q Consensus 29 ~~avi~pe~~v~~~lp~-~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~ 107 (259)
.+..+..+...+...+. ..+.....|... .+....+.++.++||+..+.|.|.+.|++|||+|+.+.. ++..+.++
T Consensus 9 ~~v~v~~~~~~W~~~~~~~~GV~~~~L~~~-~~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~--~~~~~~~~ 85 (165)
T 3cjx_A 9 KLLTVDTTAHPFLKALGGHEGTDIFPLFMD-PYNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT--EYPGQKQT 85 (165)
T ss_dssp SCEEEETTSSCCBCSGGGCTTEEEEEEEEE-TTTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET--TCTTSCEE
T ss_pred ceEEEccccCCcEECCCCCCCEEEEEeEeC-CCCCcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC--CCceEEEC
Confidence 35556666555544442 445655655322 223455779999999999999888899999999999852 33257899
Q ss_pred CCcEEEeCCCCcEEEEeCC----eEEEEEEEE
Q 025000 108 VDSYTYLPPNFAHSLRAEG----SATLVVFER 135 (259)
Q Consensus 108 ~Gd~i~~p~~~~H~~~N~~----~a~~l~v~~ 135 (259)
+||+++.|+|..|...+.+ .|.++|+.+
T Consensus 86 aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 86 AGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp TTEEEEECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred CCeEEEeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 9999999999999998733 787777654
No 152
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.82 E-value=1.6e-08 Score=85.70 Aligned_cols=94 Identities=13% Similarity=-0.061 Sum_probs=72.5
Q ss_pred eccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEE
Q 025000 149 VGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVL 228 (259)
Q Consensus 149 v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i 228 (259)
.+++++++|++.. +++..+.|...+ ...++.+.++||+.+|. |+|..+|..|||+|.-. ++...+.+||++
T Consensus 99 ~~~~~~~~W~~~~-~Gv~~~~L~~~~---~~~v~l~~~~pG~~~p~-H~H~g~E~~~VL~G~f~----de~~~~~~Gd~~ 169 (195)
T 2q1z_B 99 GRRLEDVRWRTLG-GGVRQAILPTGG---EAIARLLWIPGGQAVPD-HGHRGLELTLVLQGAFR----DETDRFGAGDIE 169 (195)
T ss_dssp CSCTTCSCCEECS-SSCEEEEECCSS---SSEEEEEEECTTCBCCC-CCCSSCEEEEEEESEEE----CSSSEEETTCEE
T ss_pred cCCccccCceecC-CCeEEEEEecCC---CcEEEEEEECCCCCCCC-cCCCCeEEEEEEEEEEE----CCcEEECCCeEE
Confidence 3467788887763 345555565433 23568999999999997 67788899999999843 444578999999
Q ss_pred EeCCCCceeEEeCCCccEEEEEE
Q 025000 229 WMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 229 ~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
++++|..|+..+.+++++.-+..
T Consensus 170 ~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 170 IADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp EECSSCCCCCEECSSSCEEEEEE
T ss_pred EeCcCCccCCEeCCCCCEEEEEE
Confidence 99999999999988888776654
No 153
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.78 E-value=7.8e-09 Score=94.09 Aligned_cols=75 Identities=16% Similarity=0.174 Sum_probs=67.8
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEE----EeCCEEEEccC-C---cEEEeCCCCceeEEeCCCccEEEEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY----RLGDSWYPVQA-G---DVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~----~~~g~~~~v~~-G---D~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
..+...+.+||...+.|-|+...+.++|++|++.+ ..+|+++.+.. | |.+|||+|..|+|+|+|++++++++
T Consensus 272 ~q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~ 351 (369)
T 3st7_A 272 GQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIM 351 (369)
T ss_dssp CEEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEE
T ss_pred ceEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEE
Confidence 34457788999999998888888999999999999 78999999999 9 9999999999999999999999988
Q ss_pred Eee
Q 025000 251 YKD 253 (259)
Q Consensus 251 ~k~ 253 (259)
.-+
T Consensus 352 ~~~ 354 (369)
T 3st7_A 352 WVN 354 (369)
T ss_dssp EES
T ss_pred ecC
Confidence 643
No 154
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.77 E-value=3e-08 Score=83.83 Aligned_cols=69 Identities=17% Similarity=0.417 Sum_probs=57.1
Q ss_pred EEEEEEecCCc----------ccCcceeeccceEEEEEEceEEEEeCCE---EE--EccCCcEEEeCCCCceeEEeCCCc
Q 025000 180 NIHIMDFQPGD----------FLNVKEVHYNQHGLLLLEGQGIYRLGDS---WY--PVQAGDVLWMAPFVPQWYAALGKT 244 (259)
Q Consensus 180 ~~~~~t~~PG~----------~~~~~~~H~~eh~~~il~G~g~~~~~g~---~~--~v~~GD~i~~~~~~~H~~~n~G~e 244 (259)
...++++.|+. ..+ .|+|..+|.+|||+|+|.+.++|+ |+ .+++||+|++|+|.+|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~-~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFE-EHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHS-CEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCc-ceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 44567777875 124 478888999999999999999974 55 999999999999999999998777
Q ss_pred cEEEE
Q 025000 245 RTRYL 249 (259)
Q Consensus 245 ~~~fi 249 (259)
.++-|
T Consensus 154 ~~~ai 158 (191)
T 1vr3_A 154 YVKAM 158 (191)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 77665
No 155
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.77 E-value=4.5e-08 Score=78.46 Aligned_cols=80 Identities=15% Similarity=0.128 Sum_probs=60.6
Q ss_pred eCCCCCcc-eEEEEEEecCCcccCc----ceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC-c
Q 025000 171 LPQAVPFD-FNIHIMDFQPGDFLNV----KEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK-T 244 (259)
Q Consensus 171 ~p~~~~~~-~~~~~~t~~PG~~~~~----~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e 244 (259)
+|.+.-.+ .........|+-...+ .|.|..-+.+||++|+|.+.+||+.+++++||+++++||++|++.+.++ +
T Consensus 4 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~ 83 (164)
T 2arc_A 4 LPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAR 83 (164)
T ss_dssp STTCCCSSSCEEEEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEECTTSS
T ss_pred cccchhhhhhhhcceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEECCEEEEecCCeEEEEcCCCCEEEEeCCCCC
Confidence 35444333 3456666677655322 2456666889999999999999999999999999999999999999874 6
Q ss_pred cEEEEE
Q 025000 245 RTRYLL 250 (259)
Q Consensus 245 ~~~fi~ 250 (259)
++++++
T Consensus 84 ~~~~~~ 89 (164)
T 2arc_A 84 EWYHQW 89 (164)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 666654
No 156
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.75 E-value=3.1e-08 Score=93.18 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=67.0
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe----CCEEEEccCCcEEEeCCCCceeEEeCCC-ccEEEEEE
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDVLWMAPFVPQWYAALGK-TRTRYLLY 251 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~----~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e~~~fi~~ 251 (259)
..+.+.+++++||+.++.| |...++.+||++|+|++.+ +-+...|++||++++|+|..||+.|+|+ ++|.++++
T Consensus 42 ~~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l 120 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKI 120 (418)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEE
T ss_pred cceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEe
Confidence 4678889999999999864 4566788999999999987 5678999999999999999999999875 68999998
Q ss_pred eec
Q 025000 252 KDV 254 (259)
Q Consensus 252 k~~ 254 (259)
.|.
T Consensus 121 ~~~ 123 (418)
T 3s7i_A 121 SMP 123 (418)
T ss_dssp EEE
T ss_pred ecC
Confidence 765
No 157
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.75 E-value=3.6e-08 Score=93.68 Aligned_cols=89 Identities=12% Similarity=0.102 Sum_probs=72.8
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC--------------------------
Q 025000 167 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-------------------------- 217 (259)
Q Consensus 167 ~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g-------------------------- 217 (259)
++.+.+.+.. ..+.+.+++++||+.++. |+|...+.+||++|+|.+-+=.
T Consensus 28 ~e~w~~~~~~L~~~gvs~~r~~i~p~Gl~lP-h~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~ 106 (466)
T 3kgl_A 28 IEVWDHHAPQLRCSGVSFVRYIIESKGLYLP-SFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQG 106 (466)
T ss_dssp EEECCTTSHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---------
T ss_pred EEEECCCChhhccCCeEEEEEEECCCCEeCC-eeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccc
Confidence 3445555422 368999999999999986 6778889999999999765310
Q ss_pred --------------------------------------EEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeecCC
Q 025000 218 --------------------------------------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 256 (259)
Q Consensus 218 --------------------------------------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~nr 256 (259)
+.+.|++||+|++|+|.+||+.|+|+++|++|+.-|.+-
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 107 QGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLAS 183 (466)
T ss_dssp --------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESSS
T ss_pred ccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCC
Confidence 236899999999999999999999999999999998753
No 158
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.67 E-value=1.4e-08 Score=85.09 Aligned_cols=67 Identities=18% Similarity=0.461 Sum_probs=53.6
Q ss_pred EEEEecCCcc---------cCcceeeccceEEEEEEceEEEEe--CCEEEE--ccCCcEEEeCCCCceeEEeCCCccEEE
Q 025000 182 HIMDFQPGDF---------LNVKEVHYNQHGLLLLEGQGIYRL--GDSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRY 248 (259)
Q Consensus 182 ~~~t~~PG~~---------~~~~~~H~~eh~~~il~G~g~~~~--~g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~f 248 (259)
-.+++.|+.. .+. |+|..+|.+|||+|+|.+.+ ||+|+. +++||+|++|+|.+|++.+..+..++-
T Consensus 74 D~i~~~~~~p~~~~~~~~~~~~-H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ 152 (179)
T 1zrr_A 74 DVISLRADNPQKEALREKFLNE-HTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTA 152 (179)
T ss_dssp EEECCCTTCTHHHHHHHHHHSC-BEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEE
T ss_pred cEEEEcCCCCChhHhhcccccc-eECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEE
Confidence 3555666632 343 78888999999999999988 899855 999999999999999999876655554
Q ss_pred E
Q 025000 249 L 249 (259)
Q Consensus 249 i 249 (259)
+
T Consensus 153 i 153 (179)
T 1zrr_A 153 I 153 (179)
T ss_dssp E
T ss_pred E
Confidence 4
No 159
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.61 E-value=1.2e-07 Score=77.85 Aligned_cols=84 Identities=12% Similarity=0.080 Sum_probs=64.2
Q ss_pred CCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeC
Q 025000 46 WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAE 125 (259)
Q Consensus 46 ~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~ 125 (259)
..+.....|..... ....+.+++++||+..+.|.|.+.|.+|||+|+.++.- .+ ..+++||+++.|+|..|+..+.
T Consensus 26 ~~Gv~~~~L~~d~~-~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~e-~~--~~~~~Gd~~~~P~g~~H~~~~~ 101 (159)
T 3ebr_A 26 SNDVMVKYFKIDPV-RGETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYKE-HD--WVAHAGSVVYETASTRHTPQSA 101 (159)
T ss_dssp CSSSEEEEEEEETT-TTEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEETT-SS--CCBCTTCEEEECSSEEECEEES
T ss_pred CCCEEEEEeeEcCC-CCeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEeC-CC--eEECCCeEEEECCCCcceeEeC
Confidence 44566666653322 23566789999999999998877888899999988542 33 4799999999999999999886
Q ss_pred ----CeEEEEEE
Q 025000 126 ----GSATLVVF 133 (259)
Q Consensus 126 ----~~a~~l~v 133 (259)
+.|.++++
T Consensus 102 ~~~~e~~~~~~~ 113 (159)
T 3ebr_A 102 YAEGPDIITFNI 113 (159)
T ss_dssp SSSSSCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 56777775
No 160
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.60 E-value=1.2e-07 Score=78.53 Aligned_cols=67 Identities=25% Similarity=0.377 Sum_probs=55.9
Q ss_pred ecCCCcCCCCCCCceEEEEEEECEEEEEEcC-C--cEEEEeCCcEEEeCCCCcEEEEeCC-eEEEEEEEEe
Q 025000 70 MQENARSALPPHDVERFIFVVQGSAMLTNAS-G--VSSKLMVDSYTYLPPNFAHSLRAEG-SATLVVFERR 136 (259)
Q Consensus 70 l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~-g--e~~~L~~Gd~i~~p~~~~H~~~N~~-~a~~l~v~~~ 136 (259)
-.|++....|.|+.+|++||++|++.+.+.+ | ++..|++||.+.+|+|++|+-...+ .+..+++.++
T Consensus 42 ~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~lviE~~ 112 (174)
T 1yfu_A 42 GGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIERQ 112 (174)
T ss_dssp CSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEEEEEEC
T ss_pred cCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEEEEEeC
Confidence 3466667888889999999999999999932 2 4799999999999999999987655 7788888766
No 161
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.56 E-value=2.5e-07 Score=78.17 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=52.5
Q ss_pred CCCCCCceEEEEEEECEEEEEEcCCc-----EEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEeccccCCCCcc
Q 025000 77 ALPPHDVERFIFVVQGSAMLTNASGV-----SSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENHITE 146 (259)
Q Consensus 77 ~~h~~~~Eef~yVl~G~l~v~v~~ge-----~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~y~p~~g~~p~ 146 (259)
..|.|..+|++||++|++.+.+ +++ ...+++||.+++|+|++|++.+.+. ..+...+.|.+.+|+.|.
T Consensus 98 ~~H~H~~~Ei~yVleG~G~f~i-~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~-~~~~airlF~~~~~W~~~ 170 (191)
T 1vr3_A 98 EEHLHLDEEIRYILEGSGYFDV-RDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK-NYVKAMRLFVGEPVWTPY 170 (191)
T ss_dssp SCEECSSCEEEEEEEEEEEEEE-ECTTSCEEEEEEETTEEEEECTTCCEEEEECTT-CCEEEEEEESSSCCCCCE
T ss_pred cceECCcceEEEEEeceEEEEE-CCCCCeEEEEEECCCCEEEECcCCcCCcccCCC-CCEEEEEEECCCCCccCC
Confidence 5677888999999999999999 653 4599999999999999999998443 223334456666776544
No 162
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.56 E-value=2.3e-07 Score=89.04 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=72.7
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC---------------------------
Q 025000 167 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG--------------------------- 216 (259)
Q Consensus 167 ~~~l~p~~~~---~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~--------------------------- 216 (259)
+..+++.... ....+.+++|+|||-.+. |.|...+.+||++|+|.+-+=
T Consensus 33 ~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lP-h~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~~~~~ 111 (531)
T 3fz3_A 33 IETWNFNQGDFQCAGVAASRITIQRNGLHLP-SYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQER 111 (531)
T ss_dssp EEECCTTSHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEECCTTCCCCEECCCC--------------
T ss_pred EEEeCCCChhhccCcceEEEEEecCCCEeCC-ccCCCCeEEEEEECcEEEEEEcCCCccccccccccccccccccccccc
Confidence 3334554333 357888999999999986 777888999999999866420
Q ss_pred -----------------------------------------------------------CEEEEccCCcEEEeCCCCcee
Q 025000 217 -----------------------------------------------------------DSWYPVQAGDVLWMAPFVPQW 237 (259)
Q Consensus 217 -----------------------------------------------------------g~~~~v~~GD~i~~~~~~~H~ 237 (259)
-|.+.|++||+|.+|+|+.||
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG~~~w 191 (531)
T 3fz3_A 112 QQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAGVAYW 191 (531)
T ss_dssp -----------------------------------------------------CCSCEESCCEEEETTEEEEECTTCCEE
T ss_pred cccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCCCeEE
Confidence 236789999999999999999
Q ss_pred EEeCCCccEEEEEEeecCC
Q 025000 238 YAALGKTRTRYLLYKDVNR 256 (259)
Q Consensus 238 ~~n~G~e~~~fi~~k~~nr 256 (259)
++|.|+++|+.++.-|+|-
T Consensus 192 ~yN~G~~~l~iv~~~Dt~n 210 (531)
T 3fz3_A 192 SYNDGDQELVAVNLFHVSS 210 (531)
T ss_dssp EECCSSSCEEEEEEEETTC
T ss_pred EEeCCCceEEEEEEEcccc
Confidence 9999999999999999864
No 163
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.55 E-value=3.1e-07 Score=77.68 Aligned_cols=68 Identities=10% Similarity=0.036 Sum_probs=57.7
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe--CCeEEEEEEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 134 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N--~~~a~~l~v~ 134 (259)
...+.++.++||+..+.|.|.++|+.|||+|+.+ ++...+.+||++++|+|..|+..+ ++.|.++.+.
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~-----de~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~ 193 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR-----DETDRFGAGDIEIADQELEHTPVAERGLDCICLAAT 193 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE-----CSSSEEETTCEEEECSSCCCCCEECSSSCEEEEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE-----CCcEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEe
Confidence 3455789999999999999999999999999855 334589999999999999999998 6678877763
No 164
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.53 E-value=2.8e-07 Score=76.81 Aligned_cols=78 Identities=12% Similarity=0.154 Sum_probs=66.6
Q ss_pred eEEEEEEecCCcccCcceeec------cceEEEEEEceEEEEeCCEE---------------------EEccCCcEEEeC
Q 025000 179 FNIHIMDFQPGDFLNVKEVHY------NQHGLLLLEGQGIYRLGDSW---------------------YPVQAGDVLWMA 231 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~------~eh~~~il~G~g~~~~~g~~---------------------~~v~~GD~i~~~ 231 (259)
+....+.+.||..+|.|.|.. -+|.+++++|+..++++|+. ..++|||.+.++
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 777899999999999866656 67888899999999999866 599999999999
Q ss_pred CCCceeEEeCCCccEEEEEEeecCCC
Q 025000 232 PFVPQWYAALGKTRTRYLLYKDVNRN 257 (259)
Q Consensus 232 ~~~~H~~~n~G~e~~~fi~~k~~nr~ 257 (259)
||.+|+|+| |.+.+...-+--+|.|
T Consensus 133 pg~~H~f~a-geegvli~EvSt~~dD 157 (175)
T 2y0o_A 133 PNTKHWFQA-GEEGAVVTEMSSTSTD 157 (175)
T ss_dssp TTCCEEEEE-EEEEEEEEEEEECCCG
T ss_pred CCCcEEEEe-CCCCEEEEEEeCCCCC
Confidence 999999999 5566777777777654
No 165
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=98.51 E-value=1.2e-05 Score=71.69 Aligned_cols=174 Identities=8% Similarity=0.126 Sum_probs=108.6
Q ss_pred EEecCCCcCCCC--CCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCc-EEEEe---CCeEEEEEEEEeccccC
Q 025000 68 ANMQENARSALP--PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA-HSLRA---EGSATLVVFERRYASLE 141 (259)
Q Consensus 68 ~~l~Pg~~~~~h--~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~-H~~~N---~~~a~~l~v~~~y~p~~ 141 (259)
++|++|...... ....|-.++.|.|.++|++ +|+++.|+.-|++|+|.|.. -.+.. ..+++|.+...+ .+
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v-dg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sAP---a~ 137 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEI-DGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCVP---AH 137 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE-TTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE---CS
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEE-CCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc---cC
Confidence 456666544443 4677778888999999999 99999999999999999977 55665 457999988655 34
Q ss_pred CCCcceeeccCCCCCCcccC---C-ceEEEEEeeC-CCCC-cceEEEEEEecCCc---ccCcceeec--cceEEEE-EEc
Q 025000 142 NHITEQIVGSTDKQPLLETP---G-EVFQLRKLLP-QAVP-FDFNIHIMDFQPGD---FLNVKEVHY--NQHGLLL-LEG 209 (259)
Q Consensus 142 g~~p~~~v~~~~di~~~~~~---g-~~~~~~~l~p-~~~~-~~~~~~~~t~~PG~---~~~~~~~H~--~eh~~~i-l~G 209 (259)
+.-|..++. .+|+..+... + ....+..+++ +... .+..|-...+.||+ +.| .|+|. +|..||. +..
T Consensus 138 ~~~P~r~I~-~~dv~~~~rG~~~~sN~R~I~~il~~~~~~s~qllmg~evltpGg~WSSyP-pHkHDrr~E~yyYF~l~p 215 (289)
T 1ywk_A 138 HKYPNVKIS-IDEITPMETGDPLTLNQRKIYQYIHPNVCESCQLQMGYTILEPGSAWNTMP-CHTHERRMEAYVYFDMEE 215 (289)
T ss_dssp SCCCCEEEC-TTTCCCCCBCCGGGTCCEEEEEEESTTTCCCSSCEEEEEEECTTCCCCC---------CEEEEEEESCCT
T ss_pred CCCCCEEEC-HHHCCeeeccCCCCCCcEEEEEeeCCCCCchheEEEEEEEEeCCCCcCCCC-CccCCCCCeeEEEEEeCC
Confidence 333444443 5666666653 2 1235656664 4343 45667778888997 244 35664 3333333 232
Q ss_pred e-EEEEeCC---EE--EEccCCcEEEeCCCCceeEEeCCCccEEEE
Q 025000 210 Q-GIYRLGD---SW--YPVQAGDVLWMAPFVPQWYAALGKTRTRYL 249 (259)
Q Consensus 210 ~-g~~~~~g---~~--~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi 249 (259)
+ ..+...| +. ..|+-||++.+|++--|. ..|.....||
T Consensus 216 ~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~~Y~yl 259 (289)
T 1ywk_A 216 DTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS--GVGTSNYSFI 259 (289)
T ss_dssp TCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC--EEESSCCEEE
T ss_pred CCeEEEECCCCCceEEEEEECCCEEEeCCCcccC--CCCCcCeEEE
Confidence 2 2444333 34 678999999999976774 3344444444
No 166
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=98.48 E-value=5.8e-05 Score=67.14 Aligned_cols=183 Identities=15% Similarity=0.185 Sum_probs=120.3
Q ss_pred cEEEEEEEecCCCcCCCC-CCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCC--CcEEEEe--CCeEEEE--EEE
Q 025000 62 HFVMYLANMQENARSALP-PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA--EGSATLV--VFE 134 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h-~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~--~~H~~~N--~~~a~~l--~v~ 134 (259)
.|.++--.+.|+.+-+.| +.+.|.+=||++|+++=.---|..-++++||.=+.-|| +.|+=.| +++++++ |+.
T Consensus 38 pf~~ld~~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 117 (277)
T 2p17_A 38 PFLLLMEDIFERGTFDVHPHRGIETVTYVISGELEHFDSKAGHSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVN 117 (277)
T ss_dssp TEEEEEEEEECTTCCCCEEECSEEEEEEEEESCEEEEETTTEEEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEE
T ss_pred CEEEEecCCCCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEee
Confidence 344443367787777777 56788888999999987752366679999999999885 4687777 3455554 553
Q ss_pred EeccccCCCCcceeeccCCCCCCcccCCceEEEEEeeCC--------CCCcceEEEEEEecCCcccCcceeeccceEEEE
Q 025000 135 RRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQ--------AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLL 206 (259)
Q Consensus 135 ~~y~p~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~p~--------~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~i 206 (259)
-+- ...+.+|..--...+++|....+| ...+.+... ....+..+.-++|+||+.+.+.-....+-.+|+
T Consensus 118 LP~-~~k~~~P~y~~~~~~~ip~~~~~g--~~~rviaG~~~g~~~p~~~~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv 194 (277)
T 2p17_A 118 LPS-AYKMTEPRYQNLRSKDMPVRKEEG--ATIRVFSGSSKGVKAPTKNIVPVTMVEMIVEPGTTVVQDLPGHYNGFLYI 194 (277)
T ss_dssp CCG-GGTTCCCEEEEECGGGSCEEEETT--EEEEEEESEETTEECCCCCSSCEEEEEEEECTTCEEEEEEETTCEEEEEE
T ss_pred CCh-hhcCCCCcceeeccccCCeeeeCC--eEEEEEEcCccCCCCceecCCCCEEEEEEECCCCEEEeccCCCCEEEEEE
Confidence 221 123445665555566777654444 245554421 122467777889999999765323345566899
Q ss_pred EEceEEEEeCCEEEEccCCcEEEeCC-C----CceeEEeCCCccEEEEEE
Q 025000 207 LEGQGIYRLGDSWYPVQAGDVLWMAP-F----VPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 207 l~G~g~~~~~g~~~~v~~GD~i~~~~-~----~~H~~~n~G~e~~~fi~~ 251 (259)
++|+.. +||+...+.+||.+++.+ + ..=.+.+. ++.++|++
T Consensus 195 ~~G~v~--v~g~~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a~~Ll~ 240 (277)
T 2p17_A 195 LEGSGV--FGADNIEGKAGQALFFSRHNRGEETELNVTAR--EKLRLLLY 240 (277)
T ss_dssp EESEEE--ETTTTEEEETTEEEEECCCCTTCEEEEEEEES--SSEEEEEE
T ss_pred EeCeEE--ECCCceEeCCCcEEEEcCCCCCccceEEEEeC--CCcEEEEE
Confidence 999855 477334699999999986 6 44556664 46777765
No 167
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=98.47 E-value=9.4e-06 Score=72.09 Aligned_cols=162 Identities=8% Similarity=0.088 Sum_probs=107.7
Q ss_pred CCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCc-EEEEe---CCeEEEEEEEEeccccCCCCcceeeccCCCC
Q 025000 80 PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA-HSLRA---EGSATLVVFERRYASLENHITEQIVGSTDKQ 155 (259)
Q Consensus 80 ~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~-H~~~N---~~~a~~l~v~~~y~p~~g~~p~~~v~~~~di 155 (259)
....|-.++.|.|.++|++ +|+++.|+.-|++|+|.|.. -.+.. ..+++|.+...+ .++.-|..++. .+|+
T Consensus 76 l~~rE~~iV~l~G~~~V~v-dG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAP---a~~~~P~r~I~-~~dv 150 (282)
T 1xru_A 76 LERRELGVINIGGAGTITV-DGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAP---AHTTYPTKKVT-PDEV 150 (282)
T ss_dssp TTTEEEEEEECSSCEEEEE-TTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE---CSSCCCCEEEC-HHHH
T ss_pred cCCcEEEEEEccCeEEEEE-CCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc---cCCCCCCEEEC-HHHC
Confidence 4567778888999999999 99999999999999999997 55664 237999888655 34332444433 4455
Q ss_pred CCcccC---C-ceEEEEEeeC-CCCC-cceEEEEEEecCCc---ccCcceeec--cceEEEE-EE--ceE--EEEeCCEE
Q 025000 156 PLLETP---G-EVFQLRKLLP-QAVP-FDFNIHIMDFQPGD---FLNVKEVHY--NQHGLLL-LE--GQG--IYRLGDSW 219 (259)
Q Consensus 156 ~~~~~~---g-~~~~~~~l~p-~~~~-~~~~~~~~t~~PG~---~~~~~~~H~--~eh~~~i-l~--G~g--~~~~~g~~ 219 (259)
...... + ....+..+++ +... -+..|-...+.||+ +.| .|+|. +|+.||. +. |.+ ++.-.++.
T Consensus 151 ~~~~rG~~~~sn~R~I~~il~~~~~~~~qllmg~evltpgg~WSSyP-pHkHDrr~EeyyYF~l~~~gfv~q~~g~p~Et 229 (282)
T 1xru_A 151 SPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMP-CHTHERRMEVYFYFNMDDDACVFHMMGQPQET 229 (282)
T ss_dssp CCEEECCGGGTCCEEEEEEESTTTCCCSSCEEEEEEECTTCCEESCS-EEECTTEEEEEEEESCCTTCCEEEEEEETTEE
T ss_pred CeeeccCCCCCCcEEEEEeeCCCCCchhhEEEEEEEEeCCCCcCCCC-CccCCCCceEEEEEEeCCCCEEEEEeCCCCCe
Confidence 555542 2 1235656664 4333 45667778888997 345 46664 4555555 22 222 23333444
Q ss_pred --EEccCCcEEEeCCCCceeEEeCCCccEEEE
Q 025000 220 --YPVQAGDVLWMAPFVPQWYAALGKTRTRYL 249 (259)
Q Consensus 220 --~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi 249 (259)
..|+-||++.+|++-+|+ ..|.+...||
T Consensus 230 rhi~V~n~daVlvP~wh~h~--~~G~~~Y~yl 259 (282)
T 1xru_A 230 RHIVMHNEQAVISPSWSIHS--GVGTKAYTFI 259 (282)
T ss_dssp EEEEECSSEEEEECTTCEEE--EEESSCCEEE
T ss_pred eEEEEECCCEEEeCCCCCCC--CCCccceEEE
Confidence 567999999999766677 4477777776
No 168
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.47 E-value=5.4e-07 Score=77.93 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=67.7
Q ss_pred cCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEe
Q 025000 151 STDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWM 230 (259)
Q Consensus 151 ~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~ 230 (259)
+.++.++++....++..+.|.-.+....+.++++.++||+.+|. |+|...|.+|||+|.-. +++. ...+||+++.
T Consensus 15 ~~~~~~W~~~~~~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~-H~H~g~Ee~~VL~G~f~--d~~~--~~~~Gd~~~~ 89 (223)
T 3o14_A 15 DTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSA-HTHDGGEEFIVLDGVFQ--DEHG--DYPAGTYVRN 89 (223)
T ss_dssp EGGGSCCEECSSTTEEEEEEEEESSSSCEEEEEEEECTTEECCC-EECTTCEEEEEEEEEEE--ETTE--EEETTEEEEE
T ss_pred eCccCCceeCCCCCEEEEEeecCCCccccEEEEEEECCCCCccc-ccCCCCEEEEEEEeEEE--ECCe--EECCCeEEEe
Confidence 66778888874445566666432222335677899999999997 77877788999999854 5554 6779999999
Q ss_pred CCCCceeEEeCCCccEEE
Q 025000 231 APFVPQWYAALGKTRTRY 248 (259)
Q Consensus 231 ~~~~~H~~~n~G~e~~~f 248 (259)
++|..|+..+ ++.|..
T Consensus 90 P~g~~H~p~a--~~gc~~ 105 (223)
T 3o14_A 90 PPTTSHVPGS--AEGCTI 105 (223)
T ss_dssp CTTCEECCEE--SSCEEE
T ss_pred CCCCccccEe--CCCCEE
Confidence 9999999987 555553
No 169
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.47 E-value=1.3e-06 Score=69.84 Aligned_cols=69 Identities=12% Similarity=0.009 Sum_probs=56.1
Q ss_pred EEEEecCCCcC-----CCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-C--CeEEEEEEEE
Q 025000 66 YLANMQENARS-----ALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-E--GSATLVVFER 135 (259)
Q Consensus 66 ~~~~l~Pg~~~-----~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N-~--~~a~~l~v~~ 135 (259)
......|+... .+|.|+.-+++||++|++++.+ +|+++.+++||.+++|||..|.+.+ . ++.+.+|+..
T Consensus 16 G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i-~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f 92 (164)
T 2arc_A 16 GLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKN-QGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYF 92 (164)
T ss_dssp EEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEE-TTEEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEE
T ss_pred cceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEE-CCEEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEE
Confidence 34455665443 2456788899999999999999 9999999999999999999999998 3 4577777753
No 170
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=98.46 E-value=3.2e-05 Score=67.50 Aligned_cols=167 Identities=11% Similarity=0.073 Sum_probs=111.2
Q ss_pred EEEecCCCcCCCC-CCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCC--CcEEEEe---CCeEEEE--EEEEecc
Q 025000 67 LANMQENARSALP-PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA---EGSATLV--VFERRYA 138 (259)
Q Consensus 67 ~~~l~Pg~~~~~h-~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~--~~H~~~N---~~~a~~l--~v~~~y~ 138 (259)
...+.||.+-+.| +.+.|.+-||++|+++=.---|..-++++||.-+..|| +.|+=.| +++++++ |+. |-
T Consensus 45 ~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~-P~- 122 (242)
T 1tq5_A 45 DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM-PE- 122 (242)
T ss_dssp EEEECTTCEEEEEEECSCEEEEEEEESEEEEEESSSCEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEEC-CS-
T ss_pred cceeCCCCcCCCcCCCCcEEEEEEEEeEEEEEeCCCCcEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEc-ch-
Confidence 6678898777777 56788899999999998752277789999999999665 7898888 2355554 663 32
Q ss_pred ccCCCCcceeeccCCCCCCcccCCceEEEEEee-CCC------CCcceEEEEEEecCCcccCcceeeccceEEEEEEceE
Q 025000 139 SLENHITEQIVGSTDKQPLLETPGEVFQLRKLL-PQA------VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQG 211 (259)
Q Consensus 139 p~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~-p~~------~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g 211 (259)
..+.+|..--.. +|... +| +.+. +.. ...+..+-.++|+||+.+-+.-.....--+|+++|+.
T Consensus 123 -~k~~~P~y~~~~---~p~~~-~g-----~~iag~~g~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v 192 (242)
T 1tq5_A 123 -ENGITPRYEQRR---FDAVQ-GK-----QLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNV 192 (242)
T ss_dssp -SCSCCCEEEEEC---CCCCS-SE-----EEEEESSCGGGCEECSSSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEE
T ss_pred -hcCCCCcceeec---CCchh-CC-----EEEEecCCCCCcEeccCCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcE
Confidence 133344433322 43322 22 2222 211 1235667778999999874422222334478999977
Q ss_pred EEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 212 IYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 212 ~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
.+ ||+ .+++||.+.+.++..=.+++ .++.++|++
T Consensus 193 ~v--~g~--~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~ 226 (242)
T 1tq5_A 193 TI--NGV--KASTSDGLAIWDEQAISIHA--DSDSEVLLF 226 (242)
T ss_dssp EE--TTE--EEETTCEEEEESCSCEEEEE--SSSEEEEEE
T ss_pred EE--CCE--EeCCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 55 774 69999999999877767776 467888775
No 171
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=98.44 E-value=3.2e-06 Score=65.84 Aligned_cols=72 Identities=15% Similarity=0.119 Sum_probs=55.8
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~ 134 (259)
.+....-+..||.-. ......+|++|||+|+++++..+|+..++++||+++||+|..-+|.-.+++|=+++.
T Consensus 41 ~~~~GvWe~tPG~~~-~~~~~~~E~~~iLeG~~~lt~ddG~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~ 112 (116)
T 3es4_A 41 GTIVAVWMAEPGIYN-YAGRDLEETFVVVEGEALYSQADADPVKIGPGSIVSIAKGVPSRLEILSSFRKLATV 112 (116)
T ss_dssp CCEEEEEEECSEEEE-ECCCSEEEEEEEEECCEEEEETTCCCEEECTTEEEEECTTCCEEEEECSCEEEEEEE
T ss_pred CEEEEEEecCCceeE-CeeCCCcEEEEEEEeEEEEEeCCCeEEEECCCCEEEECCCCeEEEEEeEEEeEEEEE
Confidence 444455577788543 223455699999999999998557889999999999999999999987777655553
No 172
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.41 E-value=5.8e-07 Score=73.34 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=75.3
Q ss_pred ceEEECCCCceeccCCC---CCcceEEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cE
Q 025000 29 DHALITPESHVLSPLPE---WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASG--VS 103 (259)
Q Consensus 29 ~~avi~pe~~v~~~lp~---~~~~~~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~g--e~ 103 (259)
...++.++...+...|. ..+...+.|-... .+.....++.++||+..+.|.|.+.|.+|||+|+....- ++ +.
T Consensus 10 ~~~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~~-e~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~-Gd~~~~ 87 (153)
T 3bal_A 10 AEEYVKISDNNYVPFPEAFSDGGITWQLLHSSP-ETSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRG-GEQEGG 87 (153)
T ss_dssp CCEEEECCGGGCEECCGGGEESCCEEEEEEEET-TTTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETT-CGGGTS
T ss_pred cceEEccccCceecCCCccCCCCeEEEEEEECC-ccceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecC-ccccCc
Confidence 45777888777766651 3466666663322 345666788999999999998877888999999998763 44 34
Q ss_pred EEEeCCcEEEeCCCCcEEE-EeCCeEEEEEE
Q 025000 104 SKLMVDSYTYLPPNFAHSL-RAEGSATLVVF 133 (259)
Q Consensus 104 ~~L~~Gd~i~~p~~~~H~~-~N~~~a~~l~v 133 (259)
..+++|++++-|+|..|.. ..++.+.++++
T Consensus 88 ~~~~aGsYv~ePpGs~H~p~~~~~~~~~~~~ 118 (153)
T 3bal_A 88 STAYAPSYGFESSGALHGKTFFPVESQFYMT 118 (153)
T ss_dssp EEEESSEEEEECTTCEESCCEESSCEEEEEE
T ss_pred cccCCCeEEEcCCCCcccceeCCCCeEEEEE
Confidence 7899999999999999984 44555555554
No 173
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.40 E-value=6.9e-07 Score=72.91 Aligned_cols=90 Identities=11% Similarity=0.003 Sum_probs=67.9
Q ss_pred eeccCCCCCCcccC----CceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCE--EEE
Q 025000 148 IVGSTDKQPLLETP----GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS--WYP 221 (259)
Q Consensus 148 ~v~~~~di~~~~~~----g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~--~~~ 221 (259)
.+-+.+++++.+.+ ..++.++.|.-. ......+.++.++||+.+|. |.|...+.+|||||+-.+.-++. ...
T Consensus 12 ~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~-~e~g~~t~lvr~~pG~~~p~-H~H~g~ee~~VL~G~~~~~~Gd~~~~~~ 89 (153)
T 3bal_A 12 EYVKISDNNYVPFPEAFSDGGITWQLLHSS-PETSSWTAIFNCPAGSSFAS-HIHAGPGEYFLTKGKMEVRGGEQEGGST 89 (153)
T ss_dssp EEEECCGGGCEECCGGGEESCCEEEEEEEE-TTTTEEEEEEEECTTEEECC-EEESSCEEEEEEESEEEETTCGGGTSEE
T ss_pred eEEccccCceecCCCccCCCCeEEEEEEEC-CccceEEEEEEeCCCCCccC-ccCCCCEEEEEEEEEEEecCccccCccc
Confidence 34457788888885 456677776311 12446677899999999997 78888888999999998755432 356
Q ss_pred ccCCcEEEeCCCCceeEE
Q 025000 222 VQAGDVLWMAPFVPQWYA 239 (259)
Q Consensus 222 v~~GD~i~~~~~~~H~~~ 239 (259)
+++|++++.++|..|...
T Consensus 90 ~~aGsYv~ePpGs~H~p~ 107 (153)
T 3bal_A 90 AYAPSYGFESSGALHGKT 107 (153)
T ss_dssp EESSEEEEECTTCEESCC
T ss_pred cCCCeEEEcCCCCcccce
Confidence 789999999999999843
No 174
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.40 E-value=8.7e-07 Score=73.35 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=53.2
Q ss_pred CCCcCCCCCCCceEEEEEEECEEEEEEcC-C------cEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEe
Q 025000 72 ENARSALPPHDVERFIFVVQGSAMLTNAS-G------VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 136 (259)
Q Consensus 72 Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~-g------e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~ 136 (259)
|++....|++..||++||++|++.+.+.+ | +...|++||.+.+|+|++|+-.....+..+++.++
T Consensus 43 Pn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~v~lviErk 114 (176)
T 1zvf_A 43 PNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADTVGIVVEQD 114 (176)
T ss_dssp SBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEEC
T ss_pred CCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCcEEEEEEec
Confidence 44667788889999999999999999833 4 47999999999999999999865555666777655
No 175
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.37 E-value=2.3e-06 Score=71.06 Aligned_cols=79 Identities=13% Similarity=0.140 Sum_probs=62.0
Q ss_pred CCcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEE---cCC-----cEEEEeCCcEEEeCCCCcEEEEeCCeEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTN---ASG-----VSSKLMVDSYTYLPPNFAHSLRAEGSATL 130 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v---~~g-----e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~ 130 (259)
..+|+++++...||+.++.|.|+ ...++.||+|+++.++ .++ ++..|++||..++|++..|+++|.++ +.
T Consensus 66 ~~~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~-~~ 144 (171)
T 3eqe_A 66 NNELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTS-ER 144 (171)
T ss_dssp CSSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSS-SC
T ss_pred CCCeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCC-CC
Confidence 35899999999999999999776 5788889999998764 134 46789999999999999999999432 22
Q ss_pred EEEEEeccc
Q 025000 131 VVFERRYAS 139 (259)
Q Consensus 131 l~v~~~y~p 139 (259)
.+....|.|
T Consensus 145 aVSlHvY~p 153 (171)
T 3eqe_A 145 MVSLHVYSP 153 (171)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEeCC
Confidence 334444654
No 176
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.36 E-value=1.5e-06 Score=72.48 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=54.5
Q ss_pred cEEEEEEEecCCCcCCCCCCC-------ceEEEEEEECEEEEEEcCCcE---------------------EEEeCCcEEE
Q 025000 62 HFVMYLANMQENARSALPPHD-------VERFIFVVQGSAMLTNASGVS---------------------SKLMVDSYTY 113 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~-------~Eef~yVl~G~l~v~v~~ge~---------------------~~L~~Gd~i~ 113 (259)
+++.-++.+.||+..+.|.|. -+|-++|+.|++++.+ +|+. ..|+|||++.
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~-~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV-EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE-SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE-CCccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 588889999999988877433 5566679999999999 7765 4999999999
Q ss_pred eCCCCcEEEEe-CCe
Q 025000 114 LPPNFAHSLRA-EGS 127 (259)
Q Consensus 114 ~p~~~~H~~~N-~~~ 127 (259)
+|+|+.|++.| .+.
T Consensus 131 Ippg~~H~f~ageeg 145 (175)
T 2y0o_A 131 IPPNTKHWFQAGEEG 145 (175)
T ss_dssp ECTTCCEEEEEEEEE
T ss_pred ECCCCcEEEEeCCCC
Confidence 99999999999 444
No 177
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=98.31 E-value=0.00011 Score=64.68 Aligned_cols=171 Identities=12% Similarity=0.060 Sum_probs=110.9
Q ss_pred EEEEEecCCCcCCCCC-CCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCC--CCcEEEEe---CCeEEEE--EEEEe
Q 025000 65 MYLANMQENARSALPP-HDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPP--NFAHSLRA---EGSATLV--VFERR 136 (259)
Q Consensus 65 ~~~~~l~Pg~~~~~h~-~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~--~~~H~~~N---~~~a~~l--~v~~~ 136 (259)
+-..++.||.+.+.|. .+.|.+-||++|+++-.---|...++++||.-+..| |+.|+=.| +++++++ |+.-
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~l- 144 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDA- 144 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCEEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEEC-
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEEeCCCCEEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEeC-
Confidence 3367788998777774 567778899999999885227788999999999977 56899888 2456554 5541
Q ss_pred ccccCCCCcceeeccCCCCCCcccCCceEEEEEee-CCC------CCcceEEEEEEecCCcccCcceeeccceEEEEEEc
Q 025000 137 YASLENHITEQIVGSTDKQPLLETPGEVFQLRKLL-PQA------VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEG 209 (259)
Q Consensus 137 y~p~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~-p~~------~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G 209 (259)
.| ....|..--. ++| ++ . .+.+. +.. ...+..+..++|+||..+-+.-.... -.+|+++|
T Consensus 145 -~p-~~~~P~yq~~---~~p----~~-~--~~lIag~~G~~~p~~~~~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G 211 (256)
T 2vec_A 145 -CP-QRENPLIQKL---ALN----MG-K--QQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPR-AYLQSIHG 211 (256)
T ss_dssp -CT-TSCCCSEEEE---ECC----CS-S--EEEEEESSCGGGCEECSSSCEEEEEEECTTCEEEEECSSSE-EEEEEEES
T ss_pred -Ch-hcCCCCceEE---cCC----CC-C--EEEEEeCCCCCCceEccCCcEEEEEEECCCCEEEEecCCCe-EEEEEEEC
Confidence 12 1112222111 122 12 2 13332 211 12356677789999998754222223 55789999
Q ss_pred eEEEEeC-CEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 210 QGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 210 ~g~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+..+.-+ ++...+.+||.+++.++..=.+++ .+++++|++
T Consensus 212 ~v~v~g~~~~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~LL~ 252 (256)
T 2vec_A 212 KFHALTHHEEKAALTCGDGAFIRDEANITLVA--DSPLRALLI 252 (256)
T ss_dssp CEEEEETTEEEEEECTTCEEEEESCSEEEEEE--SSSEEEEEE
T ss_pred EEEECCccccceEECCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 8877532 245679999999999876666665 478888876
No 178
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=98.31 E-value=4.7e-05 Score=68.17 Aligned_cols=184 Identities=10% Similarity=0.053 Sum_probs=121.5
Q ss_pred EEEE-EEEecCCCcCCCC-CCCceEEEEEE-ECEEEEEEcCCcEEEEeCCcEEEeCCC--CcEEEEe--CCeEEEE--EE
Q 025000 63 FVMY-LANMQENARSALP-PHDVERFIFVV-QGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA--EGSATLV--VF 133 (259)
Q Consensus 63 f~~~-~~~l~Pg~~~~~h-~~~~Eef~yVl-~G~l~v~v~~ge~~~L~~Gd~i~~p~~--~~H~~~N--~~~a~~l--~v 133 (259)
|.++ ...+.|+.+-+.| +.+.|.+-||+ +|+++=.---|..-++++||.=+.-|| +.|+=.| +++++++ |+
T Consensus 39 f~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 39 FLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCEEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCCCceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 4443 5567788766667 56788888999 999987752366779999999999885 4587667 3455554 55
Q ss_pred EEeccccCCCCcceeeccCCCCCCcccCCceEEEEEeeCC--------CCCcceEEEEEEecCCcccCcceeeccceEEE
Q 025000 134 ERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQ--------AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLL 205 (259)
Q Consensus 134 ~~~y~p~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~p~--------~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~ 205 (259)
.-+ ....+.+|..--...+++|....+| +.++.+..+ ....+..+--++|+||+.+-+.-...++-.+|
T Consensus 119 nLP-~~~k~~~P~y~~~~~~~ip~~~~~g--~~v~viaG~~~g~~~p~~~~~~~~~~~~~l~~g~~~~~~l~~~~~~~ly 195 (290)
T 1j1l_A 119 NLR-SSEKMVEPQYQELKSEEIPKPSKDG--VTVAVISGEALGIKSKVYTRTPTLYLDFKLDPGAKHSQPIPKGWTSFIY 195 (290)
T ss_dssp ECC-GGGTTSCCEEEEECGGGSCCCEETT--EEEEEEESEETTEECCCCCSSCEEEEEEEECTTCEEEEECCTTCEEEEE
T ss_pred cCC-hhhcCCCCcceecccccCCcEeECC--EEEEEEcCCcccCCCceeccCCcEEEEEEECCCCEEEeecCCCCEEEEE
Confidence 322 1123444554444445677554443 345554322 11235667778999999874322223456689
Q ss_pred EEEceEEEEeCCE--EEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 206 LLEGQGIYRLGDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 206 il~G~g~~~~~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+++|+..+ ||+ ..++.++..++..++..=.+.|.+++++++|++
T Consensus 196 v~~G~v~v--~g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl 241 (290)
T 1j1l_A 196 TISGDVYI--GPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLI 241 (290)
T ss_dssp EEESCEEE--SCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEE
T ss_pred EEeCeEEE--CCcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEE
Confidence 99999876 442 256778999999988877787766788888876
No 179
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.28 E-value=3.8e-06 Score=71.81 Aligned_cols=75 Identities=15% Similarity=0.184 Sum_probs=62.7
Q ss_pred EEEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEE----c------CCcEEEEeCCcEEEeCC--CC
Q 025000 51 GAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN----A------SGVSSKLMVDSYTYLPP--NF 118 (259)
Q Consensus 51 ~~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v----~------~ge~~~L~~Gd~i~~p~--~~ 118 (259)
.+.++....+.+|+++++...||..++.|.|+...++.||+|+++.++ . .+++.+|.+|+.++|++ |.
T Consensus 67 ~r~lL~~dp~~~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~ 146 (208)
T 2gm6_A 67 QQMLLHCDSAERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGD 146 (208)
T ss_dssp EEEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBC
T ss_pred eEEEeecCCCCCEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCC
Confidence 345555555678999999999999999998877999999999997654 1 23578999999999999 99
Q ss_pred cEEEEeC
Q 025000 119 AHSLRAE 125 (259)
Q Consensus 119 ~H~~~N~ 125 (259)
.|++.|.
T Consensus 147 iH~V~N~ 153 (208)
T 2gm6_A 147 IHRVHNA 153 (208)
T ss_dssp CEEEEES
T ss_pred eEEeccC
Confidence 9999993
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=98.24 E-value=4.9e-06 Score=73.31 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=68.1
Q ss_pred eCCCCC--cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEe--CCCCceeEEeCCC-c
Q 025000 171 LPQAVP--FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWM--APFVPQWYAALGK-T 244 (259)
Q Consensus 171 ~p~~~~--~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~--~~~~~H~~~n~G~-e 244 (259)
+|..+. ..+.++.+++.||.-+|.|.|.++|-+-|||+|+....+. |....+++||+-|| ..|+.|+-.|..+ +
T Consensus 54 dP~~~~fg~l~vln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~ 133 (256)
T 2vec_A 54 DPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDK 133 (256)
T ss_dssp BTTBCSCCCEEEEEEEEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCEEEEETTEEEEECCCTTCCEEEEECCSSS
T ss_pred CHhHhcCCceEeccccccCCCCccCCcCCCCcEEEEEEEeeEEEEEeCCCCEEEECCCeEEEEECCCCeEEEEEECCCCc
Confidence 455443 4567899999999999987777888889999999999999 99999999999999 6678999999765 7
Q ss_pred cEEEEE
Q 025000 245 RTRYLL 250 (259)
Q Consensus 245 ~~~fi~ 250 (259)
++.+|-
T Consensus 134 ~l~~lQ 139 (256)
T 2vec_A 134 PLTRMQ 139 (256)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 888763
No 181
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.15 E-value=4e-07 Score=76.19 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=42.1
Q ss_pred CCCCCCceEEEEEEECEEEEEEc-CCcE--EEEeCCcEEEeCCCCcEEEEeCC
Q 025000 77 ALPPHDVERFIFVVQGSAMLTNA-SGVS--SKLMVDSYTYLPPNFAHSLRAEG 126 (259)
Q Consensus 77 ~~h~~~~Eef~yVl~G~l~v~v~-~ge~--~~L~~Gd~i~~p~~~~H~~~N~~ 126 (259)
..|.|..+|++||++|++.+.+. +|+. ..+++||.+++|+|++|++.+.+
T Consensus 94 ~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~ 146 (179)
T 1zrr_A 94 NEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGS 146 (179)
T ss_dssp SCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSS
T ss_pred cceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCC
Confidence 46778889999999999988762 5776 45999999999999999999833
No 182
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=98.10 E-value=1.4e-05 Score=69.74 Aligned_cols=79 Identities=14% Similarity=-0.031 Sum_probs=67.2
Q ss_pred CCCCC--cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEe--CCCCceeEEeCCC-cc
Q 025000 172 PQAVP--FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWM--APFVPQWYAALGK-TR 245 (259)
Q Consensus 172 p~~~~--~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~--~~~~~H~~~n~G~-e~ 245 (259)
|..+. .-+.++..++.||.-+|.|.|.++|-+-|||+|+....+. |....+++||+-|| ..|+.|+=.|..+ ++
T Consensus 32 P~~~~fg~l~v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~ 111 (242)
T 1tq5_A 32 PNFMGFSALRVINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTER 111 (242)
T ss_dssp SSCSCBTTEEEEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEEESSSCEEEEETTCEEEEECTTCEEEEEECCCSSCC
T ss_pred hhHhcCCceEeeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEEeCCCCcEEECCCcEEEEECCCCcEEEEEcCCCCCe
Confidence 44444 3467889999999999988888888889999999999999 99999999999999 7778899999764 78
Q ss_pred EEEEE
Q 025000 246 TRYLL 250 (259)
Q Consensus 246 ~~fi~ 250 (259)
+.+|=
T Consensus 112 l~~lQ 116 (242)
T 1tq5_A 112 LHLYQ 116 (242)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88763
No 183
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.09 E-value=1.1e-05 Score=67.05 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=62.5
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEe----CC-----EEEEccCCcEEEeCCCCc
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL----GD-----SWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~----~g-----~~~~v~~GD~i~~~~~~~ 235 (259)
..|.|+-.+.+ +.+-.+...||..+|. |-|..+ -.+.||+|+...+. +| ....+++||+++.+++..
T Consensus 58 YtR~ll~~~~~--~~v~~l~W~PGq~S~i-HdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~i 134 (171)
T 3eqe_A 58 YGRNAIYRNNE--LEIIVINIPPNKETTV-HDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLI 134 (171)
T ss_dssp SEEEEEEECSS--CEEEEEEECTTCBCCE-ECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCE
T ss_pred EEEEEEecCCC--eEEEEEEECCCCCccc-ccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCE
Confidence 34555543433 4555899999999997 677654 55669999998653 44 578899999999999999
Q ss_pred eeEEeCCCccEEEE
Q 025000 236 QWYAALGKTRTRYL 249 (259)
Q Consensus 236 H~~~n~G~e~~~fi 249 (259)
|.+.|.|+++++-|
T Consensus 135 H~V~N~~~~~aVSl 148 (171)
T 3eqe_A 135 HKMSNPTSERMVSL 148 (171)
T ss_dssp EEEECCSSSCEEEE
T ss_pred EEEECCCCCCEEEE
Confidence 99999999887654
No 184
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.07 E-value=5.3e-06 Score=66.33 Aligned_cols=56 Identities=9% Similarity=0.107 Sum_probs=50.4
Q ss_pred CCCceEEEEEEECEEEEEEcC--------CcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEe
Q 025000 80 PHDVERFIFVVQGSAMLTNAS--------GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 136 (259)
Q Consensus 80 ~~~~Eef~yVl~G~l~v~v~~--------ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~ 136 (259)
|+..+|+++|++|++++.+ . +....|++|+...+|.|+.|+-...+.++++++..+
T Consensus 47 H~~tDE~Fivl~G~l~i~~-rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 47 HHSTDEQFILSAGKAILIT-AEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp ESSCCEEEEEEESCEEEEE-EEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEEEEES
T ss_pred CCCCCeEEEEEecEEEEEE-ecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEEEEeC
Confidence 4678999999999999998 5 347899999999999999999998888999999866
No 185
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.02 E-value=3.7e-05 Score=65.81 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=62.1
Q ss_pred EEEecCCCCCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEE----cCC------cEEEEeCCcEEEeCCC--Cc
Q 025000 52 AYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN----ASG------VSSKLMVDSYTYLPPN--FA 119 (259)
Q Consensus 52 ~~l~sp~~g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v----~~g------e~~~L~~Gd~i~~p~~--~~ 119 (259)
+.++....+..|+++++...||..++.|.|+..-++.||+|+++-+. .+| ++.+|.+|+.++|.++ .-
T Consensus 62 r~lL~~dp~~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~I 141 (211)
T 3uss_A 62 QYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDV 141 (211)
T ss_dssp EEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCC
T ss_pred EEEEecCCCCCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCE
Confidence 45666566678999999999999999998889999999999997754 122 3578999999999998 89
Q ss_pred EEEEeC
Q 025000 120 HSLRAE 125 (259)
Q Consensus 120 H~~~N~ 125 (259)
|++.|.
T Consensus 142 H~V~N~ 147 (211)
T 3uss_A 142 HQVSNA 147 (211)
T ss_dssp EEEEES
T ss_pred EEEccC
Confidence 999994
No 186
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.02 E-value=5.9e-05 Score=65.71 Aligned_cols=72 Identities=13% Similarity=0.207 Sum_probs=57.0
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF 133 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v 133 (259)
..+....-+..||..... .++.+|++|||+|+++++..+|+..++++||+++||+|..-.|.-.+.+|=+++
T Consensus 165 g~~~~GiW~~tpG~~~~~-~~~~~E~~~ILeG~v~lt~~~G~~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yv 236 (238)
T 3myx_A 165 STLRIGVWDSTPYERISR-PHKIHELMNLIEGRVVLSLENGSSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYA 236 (238)
T ss_dssp SSCEEEEEEECCEEBCCE-ECSSCEEEEEEECCEEEEETTSCEEEECTTCEEEECTTCEEEEEESSCEEEEEE
T ss_pred CCEEEeEEEeCCCEEECC-cCCCCEEEEEEEeEEEEEeCCCCEEEECCCCEEEECCCCEEEEEECccEEEEEE
Confidence 456667777788763322 235689999999999999856788999999999999999999998776655444
No 187
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=98.00 E-value=6.4e-05 Score=68.12 Aligned_cols=147 Identities=12% Similarity=0.174 Sum_probs=85.9
Q ss_pred CCceEEEEEEEC--EEEEEEcCC---------------------cEEEEeCCcEEEeCCCCcEEEEeCC-eEEEEE----
Q 025000 81 HDVERFIFVVQG--SAMLTNASG---------------------VSSKLMVDSYTYLPPNFAHSLRAEG-SATLVV---- 132 (259)
Q Consensus 81 ~~~Eef~yVl~G--~l~v~v~~g---------------------e~~~L~~Gd~i~~p~~~~H~~~N~~-~a~~l~---- 132 (259)
.+-.|..|+|+. .+++.+ +. ....|++||++|+|||++|.+-... -+++..
T Consensus 115 ~gKpE~~y~L~~~~~~~~~~-G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G~~~~Eiq~~SD~ 193 (319)
T 1qwr_A 115 LGKTECWYIIDCKENAEIIY-GHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDA 193 (319)
T ss_dssp CCCCEEEEEEEECTTCEEEE-EECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEECSSEEEEEEEESCCC
T ss_pred CCCCEEEEEccCCCchhhee-CCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEecCCCeEEEEEeCCcc
Confidence 367899999985 344444 22 4679999999999999999986411 122211
Q ss_pred EEEecc--c--cCCCCccee-------eccCCCCCCccc----CCceEEEEEeeCCCCCcceEEEEEEecCCcccCccee
Q 025000 133 FERRYA--S--LENHITEQI-------VGSTDKQPLLET----PGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEV 197 (259)
Q Consensus 133 v~~~y~--p--~~g~~p~~~-------v~~~~di~~~~~----~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~ 197 (259)
+-+.|. - +.|. |..+ +.++...+.... ..++.....+.|. .+|.+.++++.++..+ ..
T Consensus 194 t~R~yDy~R~g~~g~-pr~lhv~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~F~~~~~~~~~~~~~---~~ 266 (319)
T 1qwr_A 194 TYRVYDYDRLDSNGS-PRELHFAKAVNAATVPHVDGYIDESTESRKGITIKTFVQG---EYFSVYKWDINGEAEM---AQ 266 (319)
T ss_dssp CEEEECTTCBCTTSC-BCCCCHHHHHHHSCSSCCCCCCCCEEEEETTEEEEEEEEC---SSCEEEEEEEEEEEEE---CC
T ss_pred EEEcccccccCCCCC-cccCCHHHHHhhccccCCCcccccceeecCCceEEEeCCC---CEEEEEEEEECCceEE---cc
Confidence 112221 0 1111 2222 111111111000 0011122233332 3567777888755432 22
Q ss_pred eccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCc
Q 025000 198 HYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 198 H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~ 235 (259)
..-..++.|++|+|.+..+|+..++++||.+|+++++.
T Consensus 267 ~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 267 DESFLICSVIEGSGLLKYEDKTCPLKKGDHFILPAQMP 304 (319)
T ss_dssp CSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCC
T ss_pred CCccEEEEEEcCeEEEEECCEEEEEcCCcEEEEeCCCc
Confidence 23447899999999999999999999999999999874
No 188
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.99 E-value=8.3e-05 Score=57.82 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=60.7
Q ss_pred eccC-CCCCCcccC-C----ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEE
Q 025000 149 VGST-DKQPLLETP-G----EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYP 221 (259)
Q Consensus 149 v~~~-~di~~~~~~-g----~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~ 221 (259)
+.|+ +|+...+.. + +....|.|...+....+.+-+-...||... . ..+.+.|..|||+|++.++.+ |+.++
T Consensus 6 ~~~~~~~~~~~p~~pa~~r~~~~~~~~~~~~~~~g~~~~GvWe~tPG~~~-~-~~~~~~E~~~iLeG~~~lt~ddG~~~~ 83 (116)
T 3es4_A 6 IFNISDDVDLVPAMPAEGRDGGSYRRQIWQDDVENGTIVAVWMAEPGIYN-Y-AGRDLEETFVVVEGEALYSQADADPVK 83 (116)
T ss_dssp EEETTCCCSCEECCCCTTCSSCEEEEEEEECSSSSCCEEEEEEECSEEEE-E-CCCSEEEEEEEEECCEEEEETTCCCEE
T ss_pred eEccccccCcCCCCCcceeecCcceEEEEeeCCCCCEEEEEEecCCceeE-C-eeCCCcEEEEEEEeEEEEEeCCCeEEE
Confidence 4567 777766642 1 223444444322222334446688899763 2 233445899999999999875 77899
Q ss_pred ccCCcEEEeCCCCceeEEeC
Q 025000 222 VQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 222 v~~GD~i~~~~~~~H~~~n~ 241 (259)
+++||++++++|..--..-.
T Consensus 84 l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 84 IGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp ECTTEEEEECTTCCEEEEEC
T ss_pred ECCCCEEEECCCCeEEEEEe
Confidence 99999999999988655544
No 189
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.96 E-value=4.3e-05 Score=65.20 Aligned_cols=83 Identities=14% Similarity=0.051 Sum_probs=64.9
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe-----C------CEEEEccCCcEEEeCC--
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-----G------DSWYPVQAGDVLWMAP-- 232 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~-----~------g~~~~v~~GD~i~~~~-- 232 (259)
..|.++-.+....+.+-.+...||..+|.| .|.....++||+|+..... + ++...+++||++++++
T Consensus 66 y~r~lL~~dp~~~~~v~~l~w~PGq~spiH-dH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~ 144 (208)
T 2gm6_A 66 YQQMLLHCDSAERFSIVSFVWGPGQRTPIH-DHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTV 144 (208)
T ss_dssp CEEEEEEECTTSSCEEEEEEECTTCBCCSB-CCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTT
T ss_pred eeEEEeecCCCCCEEEEEEEeCCCcccCcc-cCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCC
Confidence 455666555445566668999999999975 5555577899999997654 2 3578899999999999
Q ss_pred CCceeEEeC-CCccEEEE
Q 025000 233 FVPQWYAAL-GKTRTRYL 249 (259)
Q Consensus 233 ~~~H~~~n~-G~e~~~fi 249 (259)
|..|.+.|. ++++..-|
T Consensus 145 g~iH~V~N~~~~~~avsL 162 (208)
T 2gm6_A 145 GDIHRVHNAYDDRVSISI 162 (208)
T ss_dssp BCCEEEEESCSSSCEEEE
T ss_pred CCeEEeccCCCCCcEEEE
Confidence 999999999 78877765
No 190
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.94 E-value=2.3e-05 Score=64.86 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=48.4
Q ss_pred ecCCcccCcceeeccceEEEEEEceEEEEeCC----EEEEccCCcEEEeCCCCceeEEeCC
Q 025000 186 FQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD----SWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 186 ~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g----~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
-.|++...+| +|..+|.+|+|+|...+.+.+ +.+.+++||++.+|+|++|+-...+
T Consensus 42 ~Gpn~r~d~H-~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 42 GGPNHRTDYH-DDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CSCBCCCCEE-ECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCCcCccCc-CCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 3466678885 788889999999999988855 5899999999999999999997765
No 191
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=97.92 E-value=6.4e-05 Score=63.79 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=61.9
Q ss_pred CcEEEEEEEecCCCcCCCCCCC-ceEEEEEEECEEEEEE-c---C-------CcEEEEeCCcEEEe-CCCCcEEEEeCCe
Q 025000 61 SHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTN-A---S-------GVSSKLMVDSYTYL-PPNFAHSLRAEGS 127 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~-~Eef~yVl~G~l~v~v-~---~-------ge~~~L~~Gd~i~~-p~~~~H~~~N~~~ 127 (259)
.+|+++++...||..++.|.|+ ...++.||+|+++-+. . + +.+.+|.+|+..+| |++.-|++.|.+.
T Consensus 68 ~~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~ 147 (200)
T 3eln_A 68 GKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSH 147 (200)
T ss_dssp GTCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCS
T ss_pred CceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCC
Confidence 4799999999999999999776 6899999999998774 1 1 12579999999999 8888999999443
Q ss_pred EEEEEEEEeccc
Q 025000 128 ATLVVFERRYAS 139 (259)
Q Consensus 128 a~~l~v~~~y~p 139 (259)
.+..+..+.|.|
T Consensus 148 ~~~avSlHvY~p 159 (200)
T 3eln_A 148 TEPAVSLHLYSP 159 (200)
T ss_dssp SCCEEEEEEEES
T ss_pred CCCEEEEEeCCC
Confidence 333444455654
No 192
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.91 E-value=3.3e-05 Score=68.44 Aligned_cols=65 Identities=12% Similarity=0.224 Sum_probs=53.3
Q ss_pred ecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEe
Q 025000 70 MQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 136 (259)
Q Consensus 70 l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~ 136 (259)
+.+|.+... ..+.|..+++|+|+..|++ +|+++.|++||++.||++..|.|...+.+.+|-+...
T Consensus 214 ~G~Ges~~~-~~~~d~wiWqLEGss~Vt~-~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~~~ 278 (286)
T 2qnk_A 214 YGQGSSEGL-RQNVDVWLWQLEGSSVVTM-GGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQD 278 (286)
T ss_dssp ECSEEEEEC-CCSSCEEEEEEESCEEEEE-TTEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEEC
T ss_pred EcCCccccc-cCcCcEEEEEEcCceEEEE-CCeEEeccCCCEEEecCCCeEEEEecCCeEEEEEEEC
Confidence 555544322 2334999999999999999 9999999999999999999999998777777777554
No 193
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.89 E-value=2.6e-05 Score=67.99 Aligned_cols=71 Identities=7% Similarity=0.072 Sum_probs=57.2
Q ss_pred cceEEEEEEecCCcccCcc-eeeccceEEEEEEceEEEEeCCE---EEEccCCcEEEeCCCCceeEEeC--CCccEEE
Q 025000 177 FDFNIHIMDFQPGDFLNVK-EVHYNQHGLLLLEGQGIYRLGDS---WYPVQAGDVLWMAPFVPQWYAAL--GKTRTRY 248 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~-~~H~~eh~~~il~G~g~~~~~g~---~~~v~~GD~i~~~~~~~H~~~n~--G~e~~~f 248 (259)
.++.+++..+.......+. |.|..-+.+||++|+|. .+|++ .+++++||+++++||..|.+... ++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 5 KSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TTEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 4688888888888775442 34445589999999999 99999 99999999999999999999877 4444443
No 194
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=97.81 E-value=0.00018 Score=67.09 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=71.7
Q ss_pred EEEEeCCcEEEeCCCCcEEEEeCCeEEEEEE-EEeccccCCCCccee-------eccCCCCC--CcccC---CceEEEEE
Q 025000 103 SSKLMVDSYTYLPPNFAHSLRAEGSATLVVF-ERRYASLENHITEQI-------VGSTDKQP--LLETP---GEVFQLRK 169 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v-~~~y~p~~g~~p~~~-------v~~~~di~--~~~~~---g~~~~~~~ 169 (259)
...|++||.+|+|||++|.+-.-.-+++..- .-.|+ .|..|..+ +.++...+ ..... .+. ....
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G~~~Eima~SDnv~R--~gltpk~~dv~~ll~vl~~~~~~~~~~~~~~~~~~~-~~~~ 317 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLR--AGLTPKYIDIPELVANVKFEPKPAGELLTAPVKSGA-ELDF 317 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEEEEEEEECSSCBCEE--CSSCSSCCCHHHHHHTCCCCBCCGGGSSCCCEEETT-EEEC
T ss_pred EEECCCCCEEEcCCCCceEcCCCcEEEEeccCCcEEE--cCCcCCccCHHHHhhhccccCCCccccccccccCCc-eEEE
Confidence 3679999999999999999874112222110 01112 23333322 11111111 00011 111 1111
Q ss_pred eeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCC
Q 025000 170 LLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFV 234 (259)
Q Consensus 170 l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~ 234 (259)
+.| ..+|.+.++++.+|.. . -.+.-..+++|++|+|.+..+++...+++||.+|+++++
T Consensus 318 ~~~---~~~F~v~~~~l~~~~~-~--~~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~fvpa~~ 376 (394)
T 2wfp_A 318 PIP---VDDFAFSLHDLALQET-S--IGQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADE 376 (394)
T ss_dssp CCS---SSSCEEEEEECCSSCE-E--ECCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECGGG
T ss_pred eCC---CCEEEEEEEEEcCCeE-E--ecCCCcEEEEEEeceEEEEECCeEEEEccCcEEEEeCCC
Confidence 222 2367788888876532 1 133334899999999999999988999999999999985
No 195
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=97.76 E-value=0.00077 Score=63.64 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=46.4
Q ss_pred cceEEEEEEec--CCcccCcceeeccceEEEEEEceEEEEeCCE-E--EEccCCcEEEeCCCCceeEEeC
Q 025000 177 FDFNIHIMDFQ--PGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-W--YPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 177 ~~~~~~~~t~~--PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~-~--~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
.+|.+.++++. +|...-. ....-..+++|++|+|.+..++. . ..+++||.+|++++..=.+.+.
T Consensus 355 ~eF~v~~~~~~~~~~~~~~~-~~~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 355 AEFSVLQTIFDKSKGGKQVI-EGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp SSCEEEEEECCTTTCCEEEE-CCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CeEEEEEEEecCCCCceeEE-ecCCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 36777788887 4532211 12334478999999999998875 4 7999999999999955456665
No 196
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.66 E-value=0.00012 Score=60.52 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=46.0
Q ss_pred CCcccCcceeeccceEEEEEEceEEEEeCC--------EEEEccCCcEEEeCCCCceeEEeC
Q 025000 188 PGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--------SWYPVQAGDVLWMAPFVPQWYAAL 241 (259)
Q Consensus 188 PG~~~~~~~~H~~eh~~~il~G~g~~~~~g--------~~~~v~~GD~i~~~~~~~H~~~n~ 241 (259)
|+....+| +|..+|.+|+|+|...+.+.+ +.+.+++||+..+|+|++|+=...
T Consensus 43 Pn~r~D~H-~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 43 PNERTDYH-INPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SBCCSCEE-ECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CCcCCcCc-CCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 44668885 888889999999999988865 489999999999999999999665
No 197
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.54 E-value=0.00016 Score=65.36 Aligned_cols=76 Identities=9% Similarity=0.178 Sum_probs=58.9
Q ss_pred EEEEEecCCCcCCCC-CCCceEEEEEEECEEEEEE---cCCcEEEEeC-C---cEEEeCCCCcEEEEe--CCeEEEEE-E
Q 025000 65 MYLANMQENARSALP-PHDVERFIFVVQGSAMLTN---ASGVSSKLMV-D---SYTYLPPNFAHSLRA--EGSATLVV-F 133 (259)
Q Consensus 65 ~~~~~l~Pg~~~~~h-~~~~Eef~yVl~G~l~v~v---~~ge~~~L~~-G---d~i~~p~~~~H~~~N--~~~a~~l~-v 133 (259)
....++.||...+.| ++...|.++|++|++.+.+ ..|+.+.+.. | +.+++|+|..|.+.| ++++.+++ .
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~ 353 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWV 353 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEec
Confidence 356778899877777 4567799999999999943 2788899999 8 899999999999999 35565554 4
Q ss_pred EEecccc
Q 025000 134 ERRYASL 140 (259)
Q Consensus 134 ~~~y~p~ 140 (259)
...|.|.
T Consensus 354 ~~~y~~~ 360 (369)
T 3st7_A 354 NEMFDPN 360 (369)
T ss_dssp SSCCCSS
T ss_pred CcccCCC
Confidence 5555553
No 198
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=97.38 E-value=0.00036 Score=62.68 Aligned_cols=121 Identities=14% Similarity=0.062 Sum_probs=67.7
Q ss_pred EEEEeCCcEEEeCCCCcEEEEeCCeEEEEEE-EEeccccCCCCccee-eccCCCCCCcccCCceEEEEEeeCCCCCcceE
Q 025000 103 SSKLMVDSYTYLPPNFAHSLRAEGSATLVVF-ERRYASLENHITEQI-VGSTDKQPLLETPGEVFQLRKLLPQAVPFDFN 180 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v-~~~y~p~~g~~p~~~-v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~ 180 (259)
...|++||++|+|||++|.+-...-+++..- .-.|.|-+=+....+ +.++...+...... . ..+.| ..+|.
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~G~~~Eiqa~SD~t~~pr~l~v~~~~~vl~~~~~~~~~~~~-~---~~~~~---~~~F~ 231 (300)
T 1zx5_A 159 TFETTPYDTFVIRPGIPHAGEGLRVLEVSSNSTLAYFFNENDWEKVKKVLNTKKVEEFEVKG-K---KGMAE---TENFG 231 (300)
T ss_dssp EEECCTTCEEEECTTCCEEEESEEEEEEEESCCCCEESSTTTHHHHHHHCCCSBCCGGGTBC-B---TTEEE---CSSEE
T ss_pred eeECCCCCEEEcCCCCceEcCCCCeeeecccCCceeecccCCHHHHHhhccccCCCccccce-e---EEcCC---CCeEE
Confidence 4689999999999999999874112222110 001111110000000 11111111000000 0 00112 23577
Q ss_pred EEEEEecCCcccCcceeeccc-eEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCc
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~ 235 (259)
+.++++.+...+ .. .-. .++.+++| |.+..+|+..++++||.+|+++++.
T Consensus 232 v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~~~~~~l~~G~~~~ipa~~~ 282 (300)
T 1zx5_A 232 LEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRGKETADLHRGYSCLVPASTD 282 (300)
T ss_dssp EEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEESSSEEEECTTCEEEECTTCC
T ss_pred EEEEEECCceEE---ec-CCceEEEEEccc-EEEEeCCeEEEEccceEEEEeCCCc
Confidence 777887753332 22 344 78999999 9999999899999999999999885
No 199
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.32 E-value=0.0015 Score=55.75 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=61.7
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe-----CCE------EEEccCCcEEEeCCC-
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-----GDS------WYPVQAGDVLWMAPF- 233 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~-----~g~------~~~v~~GD~i~~~~~- 233 (259)
..|.|+-.+....+.+-.+...||..+|. |-|...-.+.||+|+-.... +|. ...+++||++++.|+
T Consensus 60 y~r~lL~~dp~~~f~v~~l~W~PGq~spi-HDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~ 138 (211)
T 3uss_A 60 YQQYLLHVDSRQRFSVVSFVWGPGQITPV-HDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRI 138 (211)
T ss_dssp CEEEEEEECTTSSCEEEEEEECTTCBCCS-BCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTT
T ss_pred eeEEEEecCCCCCEEEEEEEECCCCcCCC-CCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCC
Confidence 34567765555566677999999999997 55555466899999987643 333 478999999999998
Q ss_pred -CceeEEeC-CCccEE
Q 025000 234 -VPQWYAAL-GKTRTR 247 (259)
Q Consensus 234 -~~H~~~n~-G~e~~~ 247 (259)
.-|.+.|. ++++..
T Consensus 139 g~IH~V~N~~~d~~av 154 (211)
T 3uss_A 139 GDVHQVSNAFSDRTSI 154 (211)
T ss_dssp BCCEEEEESCSSSCEE
T ss_pred CCEEEEccCCCCCCEE
Confidence 89999998 467643
No 200
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.32 E-value=0.0012 Score=52.60 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=58.3
Q ss_pred ceEEEEEEecCCcc---cCcceeeccc-eEEEEEEceEEEEeC--------CEEEEccCCcEEEeCCCCceeEEeCCCcc
Q 025000 178 DFNIHIMDFQPGDF---LNVKEVHYNQ-HGLLLLEGQGIYRLG--------DSWYPVQAGDVLWMAPFVPQWYAALGKTR 245 (259)
Q Consensus 178 ~~~~~~~t~~PG~~---~~~~~~H~~e-h~~~il~G~g~~~~~--------g~~~~v~~GD~i~~~~~~~H~~~n~G~e~ 245 (259)
.+.+.+..+.|... +..-|.|..+ |.+++|+|+.++.+. +....+++|+++.+|.|+.|--.+. ++
T Consensus 24 ~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e 101 (140)
T 3d0j_A 24 KWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KD 101 (140)
T ss_dssp SEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TT
T ss_pred CEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--Cc
Confidence 35667888888744 3345666655 889999999999888 4479999999999999999998874 45
Q ss_pred EEEEEEeecC
Q 025000 246 TRYLLYKDVN 255 (259)
Q Consensus 246 ~~fi~~k~~n 255 (259)
++.|+.-+-|
T Consensus 102 ~~vLLiEp~n 111 (140)
T 3d0j_A 102 TKMMYVQDSN 111 (140)
T ss_dssp CEEEEEEESC
T ss_pred eEEEEEEeCC
Confidence 6666665544
No 201
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.24 E-value=0.00059 Score=59.23 Aligned_cols=71 Identities=13% Similarity=0.046 Sum_probs=57.5
Q ss_pred cEEEEEEEecCCCcC--CCCCCCceEEEEEEECEEEEEEcCCc---EEEEeCCcEEEeCCCCcEEEEeC----CeEEEEE
Q 025000 62 HFVMYLANMQENARS--ALPPHDVERFIFVVQGSAMLTNASGV---SSKLMVDSYTYLPPNFAHSLRAE----GSATLVV 132 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~--~~h~~~~Eef~yVl~G~l~v~v~~ge---~~~L~~Gd~i~~p~~~~H~~~N~----~~a~~l~ 132 (259)
.|-+-+..+...... ..|.|+.=+++||++|+++ .+ +++ ++.+.+||.+++|||..|.+... ++.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i-~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~~ 83 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LI-DKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSV 83 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EE-ETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEEEE
T ss_pred hhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EE-CCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEEEE
Confidence 577777777666544 3456788899999999999 99 899 99999999999999999999864 5566665
Q ss_pred EE
Q 025000 133 FE 134 (259)
Q Consensus 133 v~ 134 (259)
+.
T Consensus 84 i~ 85 (276)
T 3gbg_A 84 IT 85 (276)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 202
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=97.16 E-value=0.0017 Score=54.89 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=58.9
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEe-----C-------CEEEEccCCcEEEe-C
Q 025000 166 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL-----G-------DSWYPVQAGDVLWM-A 231 (259)
Q Consensus 166 ~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~-----~-------g~~~~v~~GD~i~~-~ 231 (259)
..|.|+-+ ....+.+-.+...||..+|. |-|... -.++||+|+..... + +....+++||+.++ +
T Consensus 58 y~R~ll~~-~~~~~~l~ll~W~PGq~Spi-HDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~ 135 (200)
T 3eln_A 58 YTRNLVDQ-GNGKFNLMILCWGEGHGSSI-HDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYIND 135 (200)
T ss_dssp CEEEEEEC-GGGTCEEEEEEECTTCBCCE-ECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECT
T ss_pred eEEEeeec-CCCceEEEEEEECCCCcCCC-ccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecC
Confidence 45666543 22335555789999999997 666644 55899999998763 2 23678899999999 7
Q ss_pred CCCceeEEeCC-CccEE
Q 025000 232 PFVPQWYAALG-KTRTR 247 (259)
Q Consensus 232 ~~~~H~~~n~G-~e~~~ 247 (259)
++.-|.+.|.+ +++..
T Consensus 136 ~~giH~V~N~s~~~~av 152 (200)
T 3eln_A 136 SIGLHRVENVSHTEPAV 152 (200)
T ss_dssp TTCEEEEECCCSSCCEE
T ss_pred CCcEEEEECCCCCCCEE
Confidence 77789999999 56543
No 203
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.04 E-value=0.0031 Score=50.47 Aligned_cols=80 Identities=14% Similarity=0.075 Sum_probs=63.2
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC----EEEEccCCcE-EEeCCCCceeEEeCCCccEEEEEEe
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD----SWYPVQAGDV-LWMAPFVPQWYAALGKTRTRYLLYK 252 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g----~~~~v~~GD~-i~~~~~~~H~~~n~G~e~~~fi~~k 252 (259)
.+.+-....+||..-+.|-|...++.+++++|...+.+++ +.+.+...+. +++||+++|++.+.++. ++.+..|
T Consensus 34 kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 34 KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTT-CEEEEEE
T ss_pred cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEEEEC
Confidence 5666677778999999866666778899999999988875 3455555554 99999999999999875 8888888
Q ss_pred ecCCCC
Q 025000 253 DVNRNP 258 (259)
Q Consensus 253 ~~nr~~ 258 (259)
+-.-|+
T Consensus 113 s~~Yd~ 118 (141)
T 2pa7_A 113 SDYYDE 118 (141)
T ss_dssp SSCCCG
T ss_pred CCCcCH
Confidence 765443
No 204
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.91 E-value=0.0022 Score=51.36 Aligned_cols=74 Identities=15% Similarity=0.317 Sum_probs=53.1
Q ss_pred EEEEecCCCcCCCC-CCCceEEEEEEECEEEEEEcCC---cEEEEeCCcE-EEeCCCCcEEEEe-CCeEEEEEE-EEecc
Q 025000 66 YLANMQENARSALP-PHDVERFIFVVQGSAMLTNASG---VSSKLMVDSY-TYLPPNFAHSLRA-EGSATLVVF-ERRYA 138 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h-~~~~Eef~yVl~G~l~v~v~~g---e~~~L~~Gd~-i~~p~~~~H~~~N-~~~a~~l~v-~~~y~ 138 (259)
+....+||..-+.| +...++++++++|.+++.+.+| +++.|..... +++|+++-|.+.+ +..+.++++ ..+|.
T Consensus 38 ~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~avllvlas~~Yd 117 (141)
T 2pa7_A 38 YIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLASDYYD 117 (141)
T ss_dssp EEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTTCEEEEEESSCCC
T ss_pred EEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCCeEEEEECCCCcC
Confidence 34445577666677 4457899999999999999444 3577877666 8999999999999 445666655 33444
Q ss_pred c
Q 025000 139 S 139 (259)
Q Consensus 139 p 139 (259)
|
T Consensus 118 ~ 118 (141)
T 2pa7_A 118 E 118 (141)
T ss_dssp G
T ss_pred H
Confidence 3
No 205
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=96.70 E-value=0.017 Score=51.10 Aligned_cols=88 Identities=11% Similarity=0.016 Sum_probs=70.0
Q ss_pred CCceEEEEEeeCC-CC---CcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC-CEEEEccCCcEEEeCCCC-
Q 025000 161 PGEVFQLRKLLPQ-AV---PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFV- 234 (259)
Q Consensus 161 ~g~~~~~~~l~p~-~~---~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~-g~~~~v~~GD~i~~~~~~- 234 (259)
+|.++.++.++|. +. +.-..+.- ...||.-.|.|.|.++|=.-|+|+|+....+. |..-.+++||+-||.+|-
T Consensus 18 ~G~g~~v~R~~~~~~~~~~gpf~~ld~-~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~~~i~~GdvQwMtAG~G 96 (277)
T 2p17_A 18 NSPIHRSGSVLEPGNWQEYDPFLLLME-DIFERGTFDVHPHRGIETVTYVISGELEHFDSKAGHSTLGPGDVQWMTAGRG 96 (277)
T ss_dssp EETTEEEEEEECSSCHHHHTTEEEEEE-EEECTTCCCCEEECSEEEEEEEEESCEEEEETTTEEEEECTTCEEEEECTTC
T ss_pred cCCCeEEeecCCcccccccCCEEEEec-CCCCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCceEECCCeEEEEeCCCC
Confidence 4656677777764 32 33345566 77899889988888887788999999999998 788999999999998765
Q ss_pred -ceeEEeCCCccEEEE
Q 025000 235 -PQWYAALGKTRTRYL 249 (259)
Q Consensus 235 -~H~~~n~G~e~~~fi 249 (259)
.|+=.|..++++.+|
T Consensus 97 I~HsE~~~~~~~~~~l 112 (277)
T 2p17_A 97 VVHKEDPASGSTVHSL 112 (277)
T ss_dssp EEEEEEECTTCCEEEE
T ss_pred EEEEeecCCCCCEEEE
Confidence 499999887888876
No 206
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=96.65 E-value=0.012 Score=52.36 Aligned_cols=89 Identities=11% Similarity=-0.071 Sum_probs=71.3
Q ss_pred CCceEEEEEeeCC-C-C--CcceEEEEEEecCCcccCcceeeccceEEEEE-EceEEEEeC-CEEEEccCCcEEEeCCCC
Q 025000 161 PGEVFQLRKLLPQ-A-V--PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLL-EGQGIYRLG-DSWYPVQAGDVLWMAPFV 234 (259)
Q Consensus 161 ~g~~~~~~~l~p~-~-~--~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il-~G~g~~~~~-g~~~~v~~GD~i~~~~~~ 234 (259)
+|.++.++.++|. + . +.-..+.-+.+.|+.-.|.|.|.++|=.-|+| +|+....+. |..-.+++||+-||.+|-
T Consensus 18 ~G~G~~v~R~~~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn~~~i~~GdvQwMtAG~ 97 (290)
T 1j1l_A 18 EGVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGR 97 (290)
T ss_dssp ETBTEEEEECTTSTTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCEEEECTTCEEEEECTT
T ss_pred cCCCeEEEEeCCCccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCCCceEECCCcEEEEeCCC
Confidence 3556777777753 2 2 33467889999999878887777887778999 999999998 788999999999998765
Q ss_pred --ceeEEeCCCccEEEE
Q 025000 235 --PQWYAALGKTRTRYL 249 (259)
Q Consensus 235 --~H~~~n~G~e~~~fi 249 (259)
.|+=.|..++++.+|
T Consensus 98 GI~HsE~~~~~~~~~~l 114 (290)
T 1j1l_A 98 GILHAEMPCSEEPAHGL 114 (290)
T ss_dssp CEEEEEEECSSSCEEEE
T ss_pred CEEEEeEcCCCCCEEEE
Confidence 499999877888876
No 207
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.60 E-value=0.017 Score=47.79 Aligned_cols=70 Identities=19% Similarity=0.037 Sum_probs=54.5
Q ss_pred EEecCCcccCcceeeccceEEEEEEceEEEEeCC---------EEE--Ecc---CCcEEEeCCCCceeEEeCCCccEEEE
Q 025000 184 MDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD---------SWY--PVQ---AGDVLWMAPFVPQWYAALGKTRTRYL 249 (259)
Q Consensus 184 ~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g---------~~~--~v~---~GD~i~~~~~~~H~~~n~G~e~~~fi 249 (259)
..-.||..=+.|-|+.+...+.|++|+....+.| +|. .+. ..-.+|+|+|+.|+|.|.++++++++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 3447898888877777778899999999887732 233 344 45689999999999999998788777
Q ss_pred EEee
Q 025000 250 LYKD 253 (259)
Q Consensus 250 ~~k~ 253 (259)
|..+
T Consensus 138 y~~s 141 (174)
T 3ejk_A 138 NCTD 141 (174)
T ss_dssp EEES
T ss_pred EECC
Confidence 7654
No 208
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=96.04 E-value=0.031 Score=41.53 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=47.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cEEEEeCCcEEEeCCCCcEEEEeCCeEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVV 132 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~g--e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~ 132 (259)
+-.|.||.-. . .-+..|..-|++|++++.+ .| ++.+.++|+++.+|++....++..+++..++
T Consensus 27 vGVm~pGeyt-F-~T~~~E~M~vvsG~~~V~l-pg~~ew~~~~aGesF~Vpans~F~l~v~~~~~YlC 91 (94)
T 2oyz_A 27 VGVMLPGEYT-F-GTQAPERMTVVKGALVVKR-VGEADWTTYSSGESFDVEGNSSFELQVKDATAYLC 91 (94)
T ss_dssp EEEECSEEEE-E-EESSCEEEEEEESEEEEEE-TTCSSCEEEETTCEEEECSSEEEEEEESSCEEEEE
T ss_pred EEEEeceEEE-E-cCCCeEEEEEEEeEEEEEc-CCCCcCEEECCCCEEEECCCCEEEEEEcccEeEEE
Confidence 3345677422 1 1235788899999999999 44 5789999999999999999999866555443
No 209
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=95.71 E-value=0.36 Score=40.60 Aligned_cols=144 Identities=13% Similarity=0.046 Sum_probs=88.6
Q ss_pred eEEEEecCCCC--CcEEEE--EEEecCCCcCCC-CCCCceEEEEEEECE-EEEEEcCCcEEEE-eCCcEEEeCCCCcEEE
Q 025000 50 LGAYLITPAMG--SHFVMY--LANMQENARSAL-PPHDVERFIFVVQGS-AMLTNASGVSSKL-MVDSYTYLPPNFAHSL 122 (259)
Q Consensus 50 ~~~~l~sp~~g--~~f~~~--~~~l~Pg~~~~~-h~~~~Eef~yVl~G~-l~v~v~~ge~~~L-~~Gd~i~~p~~~~H~~ 122 (259)
..+.++.|.-. ..|... ..+++-. .+. ...+.+..+.+|+|+ +++.. +++...| ++.+-+.|+.+.+-.-
T Consensus 25 ~TrEI~~P~~~~~~~F~wRiSiA~V~~~--g~FS~FpGidR~i~lL~G~g~~L~~-~~~~~~L~~~~~p~~F~G~~~v~a 101 (200)
T 1yll_A 25 STEEIARDGGDGLDGFGWRLSIADVGES--GGFSGFAGYQRIISVLEGGGMRLRV-DGAESAPLRARQAFAFSGDSEVHC 101 (200)
T ss_dssp EEEEEEESSCSGGGSCSEEEEEEEECSC--EEECCCTTCEEEEEEEESSCEEEEE-TTEECCCBCBTCCEEEETTSCEEE
T ss_pred eEEEEEecCCCCcCCceEEEEEEEeccC--CCCCCCCCccEEEEEEeCCcEEEec-CCCccccCCCCCcEEeCCCCcEEE
Confidence 33444466432 345544 4444442 222 247999999999998 99998 7765337 8999999998888777
Q ss_pred Ee-CCeEEEEEEEEeccccCCCCcceeeccCCCCCCcccCCceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccc
Q 025000 123 RA-EGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQ 201 (259)
Q Consensus 123 ~N-~~~a~~l~v~~~y~p~~g~~p~~~v~~~~di~~~~~~g~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~e 201 (259)
+. +++++-+-++.+ + +. . ....+++.-. ...++.+.+ ..
T Consensus 102 ~L~~G~~~DfNlM~r--r--~~----~---------------~~~v~~~~~~--------~~~~~~~~~---------~~ 141 (200)
T 1yll_A 102 TLLDGAIRDFNLIYA--P--RR----H---------------RARLQWLRVE--------GELDWHGTA---------ST 141 (200)
T ss_dssp EESSSCEEEEEEEEC--T--TT----E---------------EEEEEEEEEE--------EEEEEEECC---------SE
T ss_pred EECCCCEEEEEEEEc--C--Cc----c---------------EEEEEEEecC--------CCeeEcCCC---------CE
Confidence 75 677777766533 2 10 0 0011111000 000011111 11
Q ss_pred eEEEEEEceEEEEeC-CEEEEccCCcEEEeCCCCce
Q 025000 202 HGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQ 236 (259)
Q Consensus 202 h~~~il~G~g~~~~~-g~~~~v~~GD~i~~~~~~~H 236 (259)
-.+|+|+|+-.+.++ ++...+.+||.+++......
T Consensus 142 ~~v~~l~G~~~v~~~~~~~~~L~~~d~l~~~~~~~~ 177 (200)
T 1yll_A 142 LLLFAQQDGVAISLQGQPRGQLAAHDCLCAEGLQGL 177 (200)
T ss_dssp EEEEESSSCEEEEETTEEEEEECTTCEEEEESCCSC
T ss_pred EEEEEccCcEEEEcCCCceeecCCCCEEEEeCCCcc
Confidence 358999999999877 68899999999999877644
No 210
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=95.66 E-value=0.07 Score=40.72 Aligned_cols=64 Identities=13% Similarity=0.187 Sum_probs=48.3
Q ss_pred EEEecCCCcC-CCCCCCceEEEEEEECEEEEEEcCC--cEEEEeCCcEEEeCCCCcEEEEeCCeEEEEE
Q 025000 67 LANMQENARS-ALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVV 132 (259)
Q Consensus 67 ~~~l~Pg~~~-~~h~~~~Eef~yVl~G~l~v~v~~g--e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~ 132 (259)
+-.|.||... .. .-+..|..-|++|++++.+ .| ++.+..+|+++.+|++....++..+++..++
T Consensus 41 lGVm~PGe~~YtF-~T~~~E~MevvsG~l~V~L-pg~~eW~~~~aGesF~VpanssF~lkv~~~~~Y~C 107 (111)
T 3hqx_A 41 LGVILPTEQPLTF-ETHVPERMEIISGECRVKI-ADSTESELFRAGQSFYVPGNSLFKIETDEVLDYVC 107 (111)
T ss_dssp EEEECCCSSCEEE-ECSSCEEEEEEESEEEEEE-TTCSSCEEEETTCEEEECTTCEEEEECSSCEEEEE
T ss_pred EEEEeccccceEE-cCCCcEEEEEEEeEEEEEc-CCcccCEEeCCCCEEEECCCCcEEEEECcceeEEE
Confidence 3456788411 11 2345788899999999999 44 6789999999999999999999866555554
No 211
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=95.56 E-value=0.055 Score=47.71 Aligned_cols=83 Identities=12% Similarity=0.222 Sum_probs=62.9
Q ss_pred EEEeeCCCCCc-ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEc--cC--------CcEEEeCCCCc
Q 025000 167 LRKLLPQAVPF-DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPV--QA--------GDVLWMAPFVP 235 (259)
Q Consensus 167 ~~~l~p~~~~~-~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v--~~--------GD~i~~~~~~~ 235 (259)
++.+.|+..++ -+.|+++.|++|.+... .....|=++..|+|++.+..+|+.++. +. .|++|++.|..
T Consensus 16 ~~~itp~~a~~~y~~f~~~~L~~Ge~~~~-~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~ 94 (270)
T 2qjv_A 16 IQHISPQNAGWEYVGFDVWQLXAGESITL-PSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTE 94 (270)
T ss_dssp EEEECHHHHTSSSCEEEEEEECTTCEEEE-CCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCC
T ss_pred EEEeCCCCCCcEEeEEEEEEecCCCEEEe-cCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCE
Confidence 44455665454 47899999999998764 455566678889999999999998877 23 59999999997
Q ss_pred eeEEeCCCccEEEEEEe
Q 025000 236 QWYAALGKTRTRYLLYK 252 (259)
Q Consensus 236 H~~~n~G~e~~~fi~~k 252 (259)
=.|.+.. +++|.+..
T Consensus 95 v~i~a~~--~~~~~v~s 109 (270)
T 2qjv_A 95 AXVTAET--DLELAVCS 109 (270)
T ss_dssp EEEEESS--SEEEEEEE
T ss_pred EEEEecC--CceEEEEe
Confidence 7777765 56665543
No 212
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=95.35 E-value=0.094 Score=43.23 Aligned_cols=73 Identities=12% Similarity=0.039 Sum_probs=51.3
Q ss_pred EEecCCCcCCCC-CCCceEEEEEEECEEEEEEcCC----------cEEEEe---CCcEEEeCCCCcEEEEe-CC-eEEEE
Q 025000 68 ANMQENARSALP-PHDVERFIFVVQGSAMLTNASG----------VSSKLM---VDSYTYLPPNFAHSLRA-EG-SATLV 131 (259)
Q Consensus 68 ~~l~Pg~~~~~h-~~~~Eef~yVl~G~l~v~v~~g----------e~~~L~---~Gd~i~~p~~~~H~~~N-~~-~a~~l 131 (259)
....||.--+.| +....++++|++|++...+.|. +.+.|. ..-.+|+|+|..|.+.| .. .+.++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 344566544666 3457899999999998877232 356788 56789999999999999 33 56655
Q ss_pred EE-EEecccc
Q 025000 132 VF-ERRYASL 140 (259)
Q Consensus 132 ~v-~~~y~p~ 140 (259)
+. ...|.|.
T Consensus 138 y~~s~~Y~p~ 147 (174)
T 3ejk_A 138 NCTDIPHRQG 147 (174)
T ss_dssp EEESSCCCTT
T ss_pred EECCCccCCC
Confidence 44 4556653
No 213
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=95.30 E-value=0.21 Score=43.11 Aligned_cols=81 Identities=10% Similarity=0.033 Sum_probs=60.0
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEc-------------------eEEEEeCCEEEEcc--------CCcEEE
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEG-------------------QGIYRLGDSWYPVQ--------AGDVLW 229 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G-------------------~g~~~~~g~~~~v~--------~GD~i~ 229 (259)
+.++--++.+.||...|.|-|..-+|.+...-| ...+..||.++.+. ||.-|-
T Consensus 104 k~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT 183 (246)
T 3kmh_A 104 KCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC 183 (246)
T ss_dssp CCEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE
T ss_pred CcceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe
Confidence 578888999999999999777677788877776 44566677666664 555567
Q ss_pred eCCCCceeEEeCCC-ccEEEEEEeecCCC
Q 025000 230 MAPFVPQWYAALGK-TRTRYLLYKDVNRN 257 (259)
Q Consensus 230 ~~~~~~H~~~n~G~-e~~~fi~~k~~nr~ 257 (259)
++||..|+|++.+. .++..-=.--||.|
T Consensus 184 l~Pg~~H~F~ae~g~G~vligEVSt~NDD 212 (246)
T 3kmh_A 184 LPPGLYHSFWAEAGFGDVLVGEVSSVNDD 212 (246)
T ss_dssp ECTTEEEEEEECTTSCCEEEEEEEECCCT
T ss_pred cCCCCEEEEEecCCCccEEEEEcccCcCC
Confidence 77777799999876 35666556666665
No 214
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.23 E-value=0.083 Score=44.41 Aligned_cols=76 Identities=16% Similarity=0.078 Sum_probs=59.3
Q ss_pred EEEEEEecCCcccCcceeeccc-----eEEEEEEc-eEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQ-----HGLLLLEG-QGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~e-----h~~~il~G-~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
.+....|.||+.|+. |..... |.-++.-. ...++++|+.+.-++|.++++..-..|+..|.|++ -+.+++=|
T Consensus 103 ~a~fs~L~pG~~I~p-H~g~~n~~lR~HL~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~-~RvvL~~D 180 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWP-HTGPTNCRLRMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASS-FRLIFIVD 180 (197)
T ss_dssp EEEEEEECTTEEEEE-ECCSCTTEEEEEEEEECCSSSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSS-CEEEEEEE
T ss_pred eEEEEEeCCCCCcCC-eeCCCCCeEEEEEEEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCC-CEEEEEEe
Confidence 466788899999975 444332 33344433 68899999999999999999999999999999987 67777777
Q ss_pred cCCC
Q 025000 254 VNRN 257 (259)
Q Consensus 254 ~nr~ 257 (259)
|-|-
T Consensus 181 ~~rP 184 (197)
T 3rcq_A 181 VWHP 184 (197)
T ss_dssp EECT
T ss_pred eeCC
Confidence 7664
No 215
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.01 E-value=0.098 Score=43.98 Aligned_cols=75 Identities=8% Similarity=0.037 Sum_probs=58.6
Q ss_pred EEEEEEecCCCcCCCCC---CCceEEEEEEE--C-EEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-CCeEEEEEEEEe
Q 025000 64 VMYLANMQENARSALPP---HDVERFIFVVQ--G-SAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFERR 136 (259)
Q Consensus 64 ~~~~~~l~Pg~~~~~h~---~~~Eef~yVl~--G-~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~l~v~~~ 136 (259)
..+...|.||+...+|. ...=.+-+.|. . .+.+.+ +|+++..++|.+++|.....|...| ....|++++...
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V-~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~ 181 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC-ANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDV 181 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE-TTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE-CCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEee
Confidence 56788899998877763 34344444443 3 688999 9999999999999999999999999 446788888776
Q ss_pred ccc
Q 025000 137 YAS 139 (259)
Q Consensus 137 y~p 139 (259)
..|
T Consensus 182 ~rP 184 (197)
T 3rcq_A 182 WHP 184 (197)
T ss_dssp ECT
T ss_pred eCC
Confidence 665
No 216
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=94.97 E-value=0.078 Score=40.15 Aligned_cols=63 Identities=19% Similarity=0.240 Sum_probs=46.9
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cEEEEeCCcEEEeCCCCcEEEEeCCeEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVV 132 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~g--e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~ 132 (259)
+-.|.||.- .. .-+..|..-|++|++++.+ .| ++.+.++|+++.+|++....++..+++..++
T Consensus 40 lGVm~PGeY-~F-~T~~~E~MevvsG~l~V~L-pG~~eW~~~~aGesF~VpanssF~lkv~~~t~Y~C 104 (106)
T 3eo6_A 40 LTLLHPGVY-TL-SSEVAETIRVLSGMAYYHA-EGANDVQELHAGDSMVIPANQSYRLEVMEPLDYLL 104 (106)
T ss_dssp EEEECSEEE-EE-CCSSCEEEEEEEEEEEEEC-TTCSSCEEEETTCEEEECSSSCEEEEEEEEEEEEE
T ss_pred EEEEeeeEE-Ee-cCCCcEEEEEEEeEEEEEC-CCCccCEEECCCCEEEECCCCcEEEEECceEEEEE
Confidence 344567732 22 1245788899999999999 44 6789999999999999999998755544443
No 217
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=94.96 E-value=0.24 Score=40.63 Aligned_cols=66 Identities=9% Similarity=-0.016 Sum_probs=53.2
Q ss_pred CcceEEEEEEecCCcccCcceeeccceEEEEEEceE-EEEe---CCEEEE------ccCCcE--EEeCCCCceeEEeC-C
Q 025000 176 PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQG-IYRL---GDSWYP------VQAGDV--LWMAPFVPQWYAAL-G 242 (259)
Q Consensus 176 ~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g-~~~~---~g~~~~------v~~GD~--i~~~~~~~H~~~n~-G 242 (259)
+.....-.+.|.+|..+.. |...-.|+.+...|.+ .+.+ ||+... +.+|+. +++|+|+.|+.+++ |
T Consensus 46 R~~~T~IYfLL~~g~~S~~-HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g 124 (170)
T 1yud_A 46 RQLWSSIYFLLRTGEVSHF-HRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD 124 (170)
T ss_dssp SBSCEEEEEEEETTCCEEE-EECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSS
T ss_pred CccceEEEEEECCCCCCee-EEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCC
Confidence 3445555778899998776 5556679999999998 6666 777766 889999 99999999999998 5
No 218
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.92 E-value=0.2 Score=47.19 Aligned_cols=72 Identities=8% Similarity=0.007 Sum_probs=55.5
Q ss_pred cEEEEEEEecCCCcCCCC---CCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEEe
Q 025000 62 HFVMYLANMQENARSALP---PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 136 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h---~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~~ 136 (259)
++.+.+. .++.+.... ..++|+++|+-+|++.+.. +=-...+++||++.||.|+.+++.-.+++|.++++.-
T Consensus 156 G~aI~~y--~~n~sM~~~~f~NaDGD~Livpq~G~l~i~T-EfG~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~ 230 (471)
T 1eyb_A 156 GLAIHIF--LCNTSMENRCFYNSDGDFLIVPQKGNLLIYT-EFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVY 230 (471)
T ss_dssp CEEEEEE--EECSCCCSEEEEESSEEEEEEEEESCEEEEE-TTEEEEECTTEEEEECTTCCEEEECSSSEEEEEEEEE
T ss_pred ceEEEEE--eCCCCcccceeecCCCCEEEEEEeCCEEEEE-ecccEEeccCCEEEECCccEEEEeeCCCceEEEEEcc
Confidence 3444333 345555322 4789999999999999998 6556789999999999999999986448999988643
No 219
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.75 E-value=0.035 Score=49.45 Aligned_cols=70 Identities=6% Similarity=-0.015 Sum_probs=54.7
Q ss_pred eEEEEEEecCCcccCcceeeccc-----------eEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQ-----------HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTR 247 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~e-----------h~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 247 (259)
..+|. .+.||+.|.. |....+ |+=++..=...+.+||+.+..++|.+.|+...++|+..|.|+++=.
T Consensus 92 ~~vRl-rL~PG~~I~~-HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~RI 169 (290)
T 1e5r_A 92 QMARS-RNLKNAIVIP-HRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEISRQ 169 (290)
T ss_dssp EEEEE-EEEESEEEEE-ECCC--------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSCCC
T ss_pred heEEE-EeCCCCEeeC-ccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCCeE
Confidence 45666 9999999975 444422 3444567778889999999999999999999999999999996644
Q ss_pred EEE
Q 025000 248 YLL 250 (259)
Q Consensus 248 fi~ 250 (259)
.|+
T Consensus 170 hLv 172 (290)
T 1e5r_A 170 SLC 172 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 220
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=94.73 E-value=0.11 Score=46.57 Aligned_cols=67 Identities=21% Similarity=0.346 Sum_probs=49.4
Q ss_pred CcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCC-cEEEEeCCeEEEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNF-AHSLRAEGSATLVV 132 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~-~H~~~N~~~a~~l~ 132 (259)
..|.+.+.++.++... ...++-.++.|++|++++.. ++++..|++||++++|++. .-++. +.++++.
T Consensus 249 ~~F~~~~~~~~~~~~~--~~~~~~~il~v~~G~~~l~~-~~~~~~l~~G~~~~vpa~~~~~~i~--g~~~~~~ 316 (319)
T 1qwr_A 249 EYFSVYKWDINGEAEM--AQDESFLICSVIEGSGLLKY-EDKTCPLKKGDHFILPAQMPDFTIK--GTCTLIV 316 (319)
T ss_dssp SSCEEEEEEEEEEEEE--CCCSSCEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCCCEEEE--EEEEEEE
T ss_pred CEEEEEEEEECCceEE--ccCCccEEEEEEcCeEEEEE-CCEEEEEcCCcEEEEeCCCceEEEE--eceEEEE
Confidence 4688888888644322 12356778999999999998 8888999999999999987 44454 3344443
No 221
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=94.68 E-value=0.13 Score=48.39 Aligned_cols=65 Identities=12% Similarity=0.226 Sum_probs=49.1
Q ss_pred CCcEEEEEEEec--CCCcCCCCCCCceEEEEEEECEEEEEEcCCc-E--EEEeCCcEEEeCCCCcEEEEeC
Q 025000 60 GSHFVMYLANMQ--ENARSALPPHDVERFIFVVQGSAMLTNASGV-S--SKLMVDSYTYLPPNFAHSLRAE 125 (259)
Q Consensus 60 g~~f~~~~~~l~--Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge-~--~~L~~Gd~i~~p~~~~H~~~N~ 125 (259)
-..|.+.++++. +++........+-.+++|++|++++.. +++ + ..|++||++|+|++..-.+.+.
T Consensus 354 ~~eF~v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~-~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 354 IAEFSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQI-TGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp SSSCEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEE-TTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CCeEEEEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEe-CCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 357999998887 332222223456789999999999998 664 4 7999999999999977777764
No 222
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=94.61 E-value=0.084 Score=44.01 Aligned_cols=25 Identities=16% Similarity=0.208 Sum_probs=23.0
Q ss_pred EEEccCCcEEEeCCCCceeEEeCCC
Q 025000 219 WYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 219 ~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
+..++|||++|+|+|-.|+..|.+.
T Consensus 202 ~~~l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 202 SCILSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSS
T ss_pred EEEECCCCEEEeCCCCcEEEEECCC
Confidence 5689999999999999999999964
No 223
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=94.16 E-value=0.69 Score=38.66 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=67.7
Q ss_pred EEECCCCceeccCCCCC---cceEEEEecCCCC-CcEEEE--EEEecCCCcCCCC-CCCceEEEEEEECE-EEEEEcCC-
Q 025000 31 ALITPESHVLSPLPEWT---NTLGAYLITPAMG-SHFVMY--LANMQENARSALP-PHDVERFIFVVQGS-AMLTNASG- 101 (259)
Q Consensus 31 avi~pe~~v~~~lp~~~---~~~~~~l~sp~~g-~~f~~~--~~~l~Pg~~~~~h-~~~~Eef~yVl~G~-l~v~v~~g- 101 (259)
.+++.++..... |. |.+-.+...|..+ .+|... ..+++- .++.. ..+.+.++.+|+|+ +++.. +|
T Consensus 12 ~~i~~~d~~~~p---WkNGgG~TrEI~~~P~~~~~~F~wRiSiA~V~~--~g~FS~FpG~dR~l~lL~G~gl~L~~-~g~ 85 (193)
T 3esg_A 12 SVWRAVDYVRMP---WKNGGGSTEEITRDAGTGLEGFGWRLSIADIGE--SGGFSSFAGYQRVITVIQGAGMVLTV-DGE 85 (193)
T ss_dssp EEECGGGCEEEE---CTTSSEEEEEEEECCCBTTTBCSEEEEEEEECS--SEECCCCTTCEEEEEEEESSCEEEEE-TTS
T ss_pred EEecHHHCCccc---ccCCCeEEEEEEEcCCCcCCCceEEEEEEEEcC--CCCCCCCCCceEEEEEEcCCcEEEEe-CCC
Confidence 455555555432 54 3354556666543 455544 444443 22222 47999999999997 99998 76
Q ss_pred cEEEEeCCcEEEeCCCCcEEEEe-CCeEEEEEEEEe
Q 025000 102 VSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFERR 136 (259)
Q Consensus 102 e~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~l~v~~~ 136 (259)
..+.|.+.+.+.|+.+.+-.-++ +++++-+-++.+
T Consensus 86 ~~~~L~~~~p~~F~G~~~v~a~L~~G~v~DfNlM~r 121 (193)
T 3esg_A 86 EQRGLLPLQPFAFRGDSQVSCRLITGPIRDFNLIYS 121 (193)
T ss_dssp CCEEECBTCCEEEETTSCEEEEESSSCEEEEEEEEC
T ss_pred ccEecCCCCCEEeCCCCeEEEEECCCCEEEEEEEEc
Confidence 46889999999999998887776 778877777533
No 224
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.12 E-value=0.03 Score=49.89 Aligned_cols=74 Identities=15% Similarity=0.022 Sum_probs=54.8
Q ss_pred cEEEEEEEecCCCcCCCCCCCce-----------EEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCcEEEEe-CCeEE
Q 025000 62 HFVMYLANMQENARSALPPHDVE-----------RFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSAT 129 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~E-----------ef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~H~~~N-~~~a~ 129 (259)
.+.++++.+.||+...+|....+ ++-.+..=.+.+.+ +|+.+.+++|++.||....+|...| ....|
T Consensus 90 ~l~~vRlrL~PG~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~v-dg~~~~m~~GE~w~~d~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 90 HLQMARSRNLKNAIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSN-EDTVIHMRPGEIWFLDAATVHSAVNFSEISR 168 (290)
T ss_dssp SEEEEEEEEEESEEEEEECCC--------CBCCEEEECSCCTTEEEEE-TTEEECCCTTEEEECCTTSCEEEEESSSSCC
T ss_pred hhheEEEEeCCCCEeeCccCccccccccCCceEEEeeEecCCCcEEEE-CCEEEecCCCCEEEEcCCCeeEEEcCCCCCe
Confidence 44667679999998877743211 23344455567777 9999999999999999999999999 44578
Q ss_pred EEEEEEe
Q 025000 130 LVVFERR 136 (259)
Q Consensus 130 ~l~v~~~ 136 (259)
+.++.--
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 7776544
No 225
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=93.96 E-value=0.05 Score=39.00 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=33.4
Q ss_pred CcEEEEEEEecCCCcCCCC-CCCceEEEEEEECEEEEEE
Q 025000 61 SHFVMYLANMQENARSALP-PHDVERFIFVVQGSAMLTN 98 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h-~~~~Eef~yVl~G~l~v~v 98 (259)
-++.+.++.+.||+...+| +....|++||++|++.+.+
T Consensus 34 lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 34 LDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp TTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEE
T ss_pred CCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEE
Confidence 4789999999999988888 4568899999999999887
No 226
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=93.71 E-value=0.13 Score=47.67 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=47.0
Q ss_pred CCcEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCC-cEEEE
Q 025000 60 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNF-AHSLR 123 (259)
Q Consensus 60 g~~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~-~H~~~ 123 (259)
...|.+.+.++.++. ... ..++-.++.|++|++++.. ++++..|++||++++|++. .-++.
T Consensus 321 ~~~F~v~~~~l~~~~-~~~-~~~~~~il~v~~G~~~l~~-~~~~~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 321 VDDFAFSLHDLALQE-TSI-GQHSAAILFCVEGEAVLRK-DEQRLVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp SSSCEEEEEECCSSC-EEE-CCSSCEEEEEEEEEEEEEE-TTEEEEECTTCEEEECGGGCCEEEE
T ss_pred CCEEEEEEEEEcCCe-EEe-cCCCcEEEEEEeceEEEEE-CCeEEEEccCcEEEEeCCCceEEEE
Confidence 357888888887542 111 3455689999999999998 8888999999999999984 55554
No 227
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=93.61 E-value=0.38 Score=39.92 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=46.2
Q ss_pred CCcccCccee--eccceEEEEEEceEE---EEeC------CEEEEcc----CCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 188 PGDFLNVKEV--HYNQHGLLLLEGQGI---YRLG------DSWYPVQ----AGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 188 PG~~~~~~~~--H~~eh~~~il~G~g~---~~~~------g~~~~v~----~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
+|.-=|.|-| |.+..-+.|++|+.. +.+. |+|..+. .+-.+|+|+|+.|+|.|.+++ ++++|
T Consensus 57 ~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (185)
T 1ep0_A 57 RGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNY 133 (185)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 7888787767 678888999999963 3332 2566552 367899999999999999876 55444
No 228
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.39 E-value=0.24 Score=41.12 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=42.9
Q ss_pred ecCCC-cCCCCCCCceEEEEEEECEEEEEEc--C------------------------------------CcEEEEeCCc
Q 025000 70 MQENA-RSALPPHDVERFIFVVQGSAMLTNA--S------------------------------------GVSSKLMVDS 110 (259)
Q Consensus 70 l~Pg~-~~~~h~~~~Eef~yVl~G~l~v~v~--~------------------------------------ge~~~L~~Gd 110 (259)
+.|++ .+..|....+-++.++.|+=+..+- + .-+.+|+|||
T Consensus 130 iG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD 209 (235)
T 4gjz_A 130 FGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGE 209 (235)
T ss_dssp EECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTC
T ss_pred EeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCC
Confidence 33444 4455666678999999999887761 0 0146899999
Q ss_pred EEEeCCCCcEEEEeCC
Q 025000 111 YTYLPPNFAHSLRAEG 126 (259)
Q Consensus 111 ~i~~p~~~~H~~~N~~ 126 (259)
.+|+|++--|..+|.+
T Consensus 210 ~LyiP~gW~H~V~~l~ 225 (235)
T 4gjz_A 210 ILFIPVKYWHYVRALD 225 (235)
T ss_dssp EEEECTTCEEEEEESS
T ss_pred EEEeCCCCcEEEEECC
Confidence 9999999999999944
No 229
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=93.37 E-value=0.32 Score=37.99 Aligned_cols=60 Identities=17% Similarity=0.172 Sum_probs=44.6
Q ss_pred CCcccCcc---eee-ccceEEEEEEceEEEE-eCC-------EEEEccCCcEEEeCCCCceeEEeCCCccEEE
Q 025000 188 PGDFLNVK---EVH-YNQHGLLLLEGQGIYR-LGD-------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRY 248 (259)
Q Consensus 188 PG~~~~~~---~~H-~~eh~~~il~G~g~~~-~~g-------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~f 248 (259)
|++....| -++ +.-..+-||+|+..|+ +++ +..-..+|++.+++|..+|.++...+ ++.|
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f 94 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYF 94 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEE
Confidence 66666655 333 3337899999999888 233 55678999999999999999998655 5554
No 230
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=93.35 E-value=0.12 Score=37.03 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=31.5
Q ss_pred cceEEEEEEecCCcccCcceeeccc-eEEEEEEceEEEEe
Q 025000 177 FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL 215 (259)
Q Consensus 177 ~~~~~~~~t~~PG~~~~~~~~H~~e-h~~~il~G~g~~~~ 215 (259)
-++.+.+..|.||+-.+. |.|... |+.||++|++.+-+
T Consensus 34 lgls~~r~~l~~gg~~~P-H~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 34 LDILLNCLQMNEGALFVP-HYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp TTEEEEEEEECTTCEEEE-EEESSCEEEEEEEESCEEEEE
T ss_pred CCcceEEEEEcCCcCcCC-ccCCCCcEEEEEEeceEEEEE
Confidence 478899999999999986 677644 88999999997654
No 231
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=93.26 E-value=0.34 Score=43.14 Aligned_cols=58 Identities=9% Similarity=0.195 Sum_probs=44.7
Q ss_pred CcEEEEEEEecCCCcCCCCCCCce-EEEEEEECEEEEEEcCCcEEEEeCCcEEEeCCCCc-EEEE
Q 025000 61 SHFVMYLANMQENARSALPPHDVE-RFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA-HSLR 123 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h~~~~E-ef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~~~~-H~~~ 123 (259)
..|.+.+.++.+.... .. ++- .++.|++| +++.. +|++..|++|+++++|++.. -++.
T Consensus 228 ~~F~v~~~~~~~~~~~--~~-~~~~~il~v~~G-~~i~~-~~~~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 228 ENFGLEVVDVTGTAEI--KT-GGVMNILYAAEG-YFILR-GKETADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp SSEEEEEEEEEEEEEE--EC-CSBCEEEEEEES-CEEEE-SSSEEEECTTCEEEECTTCCEEEEE
T ss_pred CeEEEEEEEECCceEE--ec-CCceEEEEEccc-EEEEe-CCeEEEEccceEEEEeCCCceEEEE
Confidence 4688888887642221 12 556 78999999 99998 89999999999999999984 5554
No 232
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.17 E-value=0.33 Score=35.93 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=50.5
Q ss_pred ecCCcccCcceeeccceEEEEEEceEEEEeCCE--EEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 186 FQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 186 ~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+.||... =.-...|.+-|++|...+.+.|+ |...++||...+|.+..=.++.. ++..|||.
T Consensus 30 m~pGeyt---F~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 30 MLPGEYT---FGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp ECSEEEE---EEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EeceEEE---EcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 4577642 23345699999999999999985 99999999999999988888876 88999985
No 233
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=93.01 E-value=0.38 Score=39.63 Aligned_cols=151 Identities=12% Similarity=0.018 Sum_probs=85.6
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEE-----eCCCCcEEEEeCCeEEEEEEEEe-ccc
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTY-----LPPNFAHSLRAEGSATLVVFERR-YAS 139 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~-----~p~~~~H~~~N~~~a~~l~v~~~-y~p 139 (259)
...+++|...-......+.+++|++|.+.+.. +|+. ..+++||++= ...-...+.+..++++++.+.+. |..
T Consensus 32 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~-~~~~~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~ 110 (246)
T 3of1_A 32 EKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV-NDNKVNSSGPGSSFGELALMYNSPRAATVVATSDCLLWALDRLTFRK 110 (246)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEECCEEEES-TTSCCEEECTTCEECHHHHHHTCCCSSEEEESSCEEEEEEEHHHHHH
T ss_pred eEEECCCCEEEecCCCCCEEEEEEeeEEEEEE-CCEEEEecCCCCeeehhHHhcCCCCCcEEEECCCeEEEEEEhHHHHH
Confidence 45566665442223457899999999999997 6654 6899999873 12222345556777888777432 111
Q ss_pred cCCCCcceeecc----CCCCCCcccCCceEEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEE
Q 025000 140 LENHITEQIVGS----TDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR 214 (259)
Q Consensus 140 ~~g~~p~~~v~~----~~di~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~ 214 (259)
+-...|..-... ...++. +. .+.+.+.. -...+....+++|..+=. +-......|+|++|+..+.
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~~~--f~-------~l~~~~l~~l~~~~~~~~~~~g~~i~~-~g~~~~~~y~I~~G~v~v~ 180 (246)
T 3of1_A 111 ILLGSSFKKRLMYDDLLKSMPV--LK-------SLTTYDRAKLADALDTKIYQPGETIIR-EGDQGENFYLIEYGAVDVS 180 (246)
T ss_dssp TTTTTTSHHHHHSHHHHHHCGG--GT-------TCCHHHHHHHHHTCEEEEECTTCEEEC-TTSBCCEEEEEEECEEEEE
T ss_pred HHHHhHHHHHHHHHHHHhhChh--hh-------cCCHHHHHHHHHhhheEEeCCCCEEEe-CCCcCCEEEEEEecEEEEE
Confidence 111111100000 000000 00 01111111 123345677889988732 3344557899999999988
Q ss_pred eCC--EEEEccCCcEE
Q 025000 215 LGD--SWYPVQAGDVL 228 (259)
Q Consensus 215 ~~g--~~~~v~~GD~i 228 (259)
..+ ....+.+||++
T Consensus 181 ~~~~~~~~~l~~g~~f 196 (246)
T 3of1_A 181 KKGQGVINKLKDHDYF 196 (246)
T ss_dssp ETTTEEEEEEETTCEE
T ss_pred EcCCceEEEcCCCCcc
Confidence 877 46788999976
No 234
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=92.98 E-value=0.49 Score=39.18 Aligned_cols=63 Identities=11% Similarity=0.198 Sum_probs=45.9
Q ss_pred CCcccCccee--eccceEEEEEEceEE-EEeC--------CEEEEcc--C--CcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 188 PGDFLNVKEV--HYNQHGLLLLEGQGI-YRLG--------DSWYPVQ--A--GDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 188 PG~~~~~~~~--H~~eh~~~il~G~g~-~~~~--------g~~~~v~--~--GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
+|.-=|.|-| +.+...+.|++|+.. +.+| |+|..+. + +-.+|+|+|+.|+|.|.+++ ++++|.
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 7887777666 677788999999862 2222 2566553 2 67899999999999999876 555443
No 235
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=92.35 E-value=0.76 Score=38.45 Aligned_cols=63 Identities=11% Similarity=0.161 Sum_probs=44.1
Q ss_pred cCCcccCcceeec---cceEEEEEEceE-EEEeCC--------EEEEcc----CCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 187 QPGDFLNVKEVHY---NQHGLLLLEGQG-IYRLGD--------SWYPVQ----AGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 187 ~PG~~~~~~~~H~---~eh~~~il~G~g-~~~~~g--------~~~~v~----~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+|..=+.|-|.. +...+.|++|+. .+.+|. +|..+. ..-.+|+|+|+.|+|.|.++ +.+++|
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd-~a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED-SIVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS-EEEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC-CeEEEE
Confidence 4677666654543 667789999988 444442 355443 46889999999999999987 455543
No 236
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=92.26 E-value=0.43 Score=36.03 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=59.2
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC--EEEEccCCcEEEeCCCCceeEEe
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--SWYPVQAGDVLWMAPFVPQWYAA 240 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g--~~~~v~~GD~i~~~~~~~H~~~n 240 (259)
|++..+-+.-.|... .. +=.+.||.+ .=.-...|.+-|++|...+.+.| +|...++|+...+|.+..=.++.
T Consensus 23 GkV~S~~~~~~dG~~-kT--lGVm~PGeY---~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 23 GRRSERSVILADGSM-HS--LTLLHPGVY---TLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp TTEEEEEEEETTSCE-EE--EEEECSEEE---EECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred CeEEEEEEEeCCCCe-EE--EEEEeeeEE---EecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEE
Confidence 455666555333221 11 223457753 22334558999999999999999 79999999999999999988887
Q ss_pred CCCccEEEEEE
Q 025000 241 LGKTRTRYLLY 251 (259)
Q Consensus 241 ~G~e~~~fi~~ 251 (259)
. ++..|+|+
T Consensus 97 ~--~~t~Y~Cs 105 (106)
T 3eo6_A 97 M--EPLDYLLS 105 (106)
T ss_dssp E--EEEEEEEE
T ss_pred C--ceEEEEEc
Confidence 6 79999996
No 237
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=92.26 E-value=0.42 Score=43.19 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=44.6
Q ss_pred EecC-CCcCCCCCCCceEEEEEEECEEEEEEc-C-------------------------------------CcEEEEeCC
Q 025000 69 NMQE-NARSALPPHDVERFIFVVQGSAMLTNA-S-------------------------------------GVSSKLMVD 109 (259)
Q Consensus 69 ~l~P-g~~~~~h~~~~Eef~yVl~G~l~v~v~-~-------------------------------------ge~~~L~~G 109 (259)
-+.| |+..+.|....+-|+..+.|+=+..+- . ..+.+|+||
T Consensus 146 ~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pG 225 (342)
T 1vrb_A 146 YAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPG 225 (342)
T ss_dssp EEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTT
T ss_pred EEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCC
Confidence 3445 556677877788999999998777662 0 135699999
Q ss_pred cEEEeCCCCcEEEEeC
Q 025000 110 SYTYLPPNFAHSLRAE 125 (259)
Q Consensus 110 d~i~~p~~~~H~~~N~ 125 (259)
|.+|+|+|-.|..++.
T Consensus 226 D~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 226 TMLYLPRGLWHSTKSD 241 (342)
T ss_dssp CEEEECTTCEEEEECS
T ss_pred cEEEeCCCccEEEEEC
Confidence 9999999999999985
No 238
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=92.09 E-value=0.23 Score=36.72 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=29.6
Q ss_pred EEEccCCcEEEeCCCCceeEEeCCCccEEEEEEeec
Q 025000 219 WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 254 (259)
Q Consensus 219 ~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~~ 254 (259)
.-.|++||++++|.|-+=...|.. .|+||+||=-
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tn 40 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVN 40 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS--SEEEEEEEES
T ss_pred hceecCCcEEEECCCCceeEEecC--CeEEEEEEec
Confidence 457999999999999999999985 4999999743
No 239
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=92.05 E-value=0.84 Score=37.73 Aligned_cols=62 Identities=13% Similarity=0.203 Sum_probs=44.0
Q ss_pred CCcccCcceee---ccceEEEEEEceEE-EEeC--------CEEEEcc--C--CcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 188 PGDFLNVKEVH---YNQHGLLLLEGQGI-YRLG--------DSWYPVQ--A--GDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 188 PG~~~~~~~~H---~~eh~~~il~G~g~-~~~~--------g~~~~v~--~--GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
+|.-=|.|-|. .+..-+.|++|+.. +.+| |+|..+. + +-.+|+|+|+.|+|.+.++. .+++|
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 78877776554 56677899999863 2222 3466553 2 57899999999999999876 44433
No 240
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=91.38 E-value=2 Score=36.94 Aligned_cols=63 Identities=16% Similarity=0.228 Sum_probs=46.7
Q ss_pred CcEEEEEEEecCCCcCCCC-CCCceEEEEEEEC-E------------------EEEEEcCC--------cEEEEeCCcEE
Q 025000 61 SHFVMYLANMQENARSALP-PHDVERFIFVVQG-S------------------AMLTNASG--------VSSKLMVDSYT 112 (259)
Q Consensus 61 ~~f~~~~~~l~Pg~~~~~h-~~~~Eef~yVl~G-~------------------l~v~v~~g--------e~~~L~~Gd~i 112 (259)
+.++-=++.+.||+..+.| +..-+|-+++--| . +++.+ +| ....|.||+++
T Consensus 104 k~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~-DG~~~~~~aG~~i~L~PGESi 182 (246)
T 3kmh_A 104 KCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVI-DGCRQKHTAGSQLRLSPGESI 182 (246)
T ss_dssp CCEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEE-TTEEEEECTTCEEEECTTCEE
T ss_pred CcceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEec-CCeEEEeCCCCEEEECCCCeE
Confidence 4677788889999988888 3456666666665 2 23333 33 45588999999
Q ss_pred EeCCCCcEEEEe
Q 025000 113 YLPPNFAHSLRA 124 (259)
Q Consensus 113 ~~p~~~~H~~~N 124 (259)
-++||+-|+|..
T Consensus 183 Tl~Pg~~H~F~a 194 (246)
T 3kmh_A 183 CLPPGLYHSFWA 194 (246)
T ss_dssp EECTTEEEEEEE
T ss_pred ecCCCCEEEEEe
Confidence 999999999998
No 241
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=91.37 E-value=1 Score=35.07 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=43.9
Q ss_pred CCCcCCCC-----CCCceEEEEEEECEEEEEE-c-CC-----cEEEEeCCcEEEeCCCCcEEEEe-CCeEEE
Q 025000 72 ENARSALP-----PHDVERFIFVVQGSAMLTN-A-SG-----VSSKLMVDSYTYLPPNFAHSLRA-EGSATL 130 (259)
Q Consensus 72 Pg~~~~~h-----~~~~Eef~yVl~G~l~v~v-~-~g-----e~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~ 130 (259)
|++-.+.| ..+.-+-+-||+|++++.. . +| +...+.+|+...+||+..|++.. +.++++
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f 94 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYF 94 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEE
Confidence 55545555 3567788899999998873 1 22 34578999999999999999996 555555
No 242
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=91.36 E-value=0.48 Score=39.71 Aligned_cols=73 Identities=11% Similarity=0.136 Sum_probs=51.6
Q ss_pred EEEEecCCCcCCCCCCCceEEEEEEE-CEE-EEEEcCC-------c--EEEEeCCcEEEeCCCCcEEEEe-CCeEEEEEE
Q 025000 66 YLANMQENARSALPPHDVERFIFVVQ-GSA-MLTNASG-------V--SSKLMVDSYTYLPPNFAHSLRA-EGSATLVVF 133 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~Eef~yVl~-G~l-~v~v~~g-------e--~~~L~~Gd~i~~p~~~~H~~~N-~~~a~~l~v 133 (259)
+...-.+|.--+.|.|....++.|++ |++ .+.+ |. + ...|.++..+|||+|..|.+.+ +..+.+++.
T Consensus 63 n~S~s~~GvlRGlH~h~q~Klv~~~~~G~v~dV~V-DlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~ 141 (197)
T 1nxm_A 63 NVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWV-DLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYL 141 (197)
T ss_dssp EEEEEETTBEEEEEECSSCEEEEECSSCCEEEEEE-ECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEE
T ss_pred EEEECCCCCcceeeecccceEEEEcCCCEEEEEEE-ECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEE
Confidence 33333455444667567889999999 995 6666 33 3 4688899999999999999999 555666543
Q ss_pred -EEeccc
Q 025000 134 -ERRYAS 139 (259)
Q Consensus 134 -~~~y~p 139 (259)
...|.|
T Consensus 142 ~s~~Y~p 148 (197)
T 1nxm_A 142 VNDYWAL 148 (197)
T ss_dssp ESSCCCG
T ss_pred CCCccCh
Confidence 444554
No 243
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=91.26 E-value=0.55 Score=38.92 Aligned_cols=69 Identities=16% Similarity=0.231 Sum_probs=46.4
Q ss_pred CCCcCCCC-C--CCceEEEEEEECEE-EEEEc-C------Cc--EEEEeC--CcEEEeCCCCcEEEEe-CCeEEEEEE-E
Q 025000 72 ENARSALP-P--HDVERFIFVVQGSA-MLTNA-S------GV--SSKLMV--DSYTYLPPNFAHSLRA-EGSATLVVF-E 134 (259)
Q Consensus 72 Pg~~~~~h-~--~~~Eef~yVl~G~l-~v~v~-~------ge--~~~L~~--Gd~i~~p~~~~H~~~N-~~~a~~l~v-~ 134 (259)
+|.--+.| + +...+++.|++|++ .+.++ . |+ ...|.+ ...+|+|+|..|.|.+ +..+.+++. .
T Consensus 57 ~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 136 (185)
T 1ep0_A 57 RGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCT 136 (185)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred CCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEecC
Confidence 55444566 3 57789999999996 45541 1 12 356766 5789999999999999 444555543 4
Q ss_pred Eecccc
Q 025000 135 RRYASL 140 (259)
Q Consensus 135 ~~y~p~ 140 (259)
..|.|.
T Consensus 137 ~~Y~p~ 142 (185)
T 1ep0_A 137 ELYHPE 142 (185)
T ss_dssp SCCCGG
T ss_pred CccChh
Confidence 556553
No 244
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=91.20 E-value=0.68 Score=37.92 Aligned_cols=63 Identities=8% Similarity=0.091 Sum_probs=49.1
Q ss_pred EEEEEEEecCCCcCCCCCCCceEEEEEEECE-EEEEE--cCCcEEE------EeCCcE--EEeCCCCcEEEEeC
Q 025000 63 FVMYLANMQENARSALPPHDVERFIFVVQGS-AMLTN--ASGVSSK------LMVDSY--TYLPPNFAHSLRAE 125 (259)
Q Consensus 63 f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~-l~v~v--~~ge~~~------L~~Gd~--i~~p~~~~H~~~N~ 125 (259)
...++.-|.+|..+..|....+|+.+...|. +++.+ .+|+... +.+|+. +++|+|.-+..++.
T Consensus 49 ~T~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 49 WSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp CEEEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEES
T ss_pred ceEEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEEC
Confidence 4556667889987778876799999999998 57766 2455444 567888 99999999999984
No 245
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=90.97 E-value=1.6 Score=36.71 Aligned_cols=63 Identities=13% Similarity=0.108 Sum_probs=44.1
Q ss_pred cCCcccCcceeec---cceEEEEEEceE-EEEeCC--------EEEEcc--C--CcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 187 QPGDFLNVKEVHY---NQHGLLLLEGQG-IYRLGD--------SWYPVQ--A--GDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 187 ~PG~~~~~~~~H~---~eh~~~il~G~g-~~~~~g--------~~~~v~--~--GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+|.-=+.|-|.. +...+.|++|+. .+.+|. +|..+. + +-.+|+|+|+.|+|.+.+++ .+++|
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 4777767655543 677889999986 344442 355543 3 57899999999999999876 44443
No 246
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=90.90 E-value=0.56 Score=44.62 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=41.2
Q ss_pred ecCCcccCcceeeccceEEEEEEceE--EEEeCC-------------------------EEEEccCCcEEEeCCCCceeE
Q 025000 186 FQPGDFLNVKEVHYNQHGLLLLEGQG--IYRLGD-------------------------SWYPVQAGDVLWMAPFVPQWY 238 (259)
Q Consensus 186 ~~PG~~~~~~~~H~~eh~~~il~G~g--~~~~~g-------------------------~~~~v~~GD~i~~~~~~~H~~ 238 (259)
+.|+++.+. --|...+..+++++.| ..++-. ....++|||++|+|+|.+|+.
T Consensus 170 ~tp~Gs~g~-~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~ 248 (489)
T 4diq_A 170 LTPPNSQGF-APHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQA 248 (489)
T ss_dssp EECSSBCCS-CCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEE
T ss_pred ecCCCcccc-cCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEE
Confidence 346666554 3455556677777777 222211 367899999999999999999
Q ss_pred EeCCCcc
Q 025000 239 AALGKTR 245 (259)
Q Consensus 239 ~n~G~e~ 245 (259)
.+.+++.
T Consensus 249 ~s~~~~~ 255 (489)
T 4diq_A 249 ECQDGVH 255 (489)
T ss_dssp EBCSSCC
T ss_pred EecCCCc
Confidence 9997543
No 247
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=90.81 E-value=2.7 Score=36.80 Aligned_cols=78 Identities=12% Similarity=0.101 Sum_probs=54.3
Q ss_pred EEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCc-eeEEeCCCcc
Q 025000 167 LRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP-QWYAALGKTR 245 (259)
Q Consensus 167 ~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~-H~~~n~G~e~ 245 (259)
+|.|.-.+.+..-. ++.|.||=..|. --|...-++|||+|+..+ +| ..+.+|+++|+|.|+. =.++-.|+++
T Consensus 81 ~RlLs~~d~GaSTl--~V~fpp~~~~P~-Gi~~ad~E~fVL~G~i~~--G~--~~l~~h~Y~f~PaGV~~~~~kv~~~~g 153 (303)
T 2qdr_A 81 RRLLTWHDSGASTS--RVVLPPKFEAPS-GIFTADLEIFVIKGAIQL--GE--WQLNKHSYSFIPAGVRIGSWKVLGGEE 153 (303)
T ss_dssp EEEEEECTTSCEEE--EEEECTTCEECC-BEESSCEEEEEEESEEEE--TT--EEECTTEEEEECTTCCBCCEEEETTSC
T ss_pred eeecccCCCCcceE--EEEecCCCCCCC-cccccceEEEEEEeEEEe--CC--EEecCCceEEecCCCccCceeecCCCC
Confidence 34444343343322 567889988886 455555449999987654 55 4578999999999997 4455558888
Q ss_pred EEEEEE
Q 025000 246 TRYLLY 251 (259)
Q Consensus 246 ~~fi~~ 251 (259)
.+-|.|
T Consensus 154 ~~iL~f 159 (303)
T 2qdr_A 154 AEILWM 159 (303)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 888887
No 248
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=90.81 E-value=1.3 Score=39.94 Aligned_cols=32 Identities=9% Similarity=0.002 Sum_probs=26.3
Q ss_pred EEEEccCCcEEEeCCCCceeEEeCCCccEEEE
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYL 249 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi 249 (259)
....++|||++|+|+|.+|...+.++++..-+
T Consensus 218 ~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsv 249 (342)
T 1vrb_A 218 EIVNLTPGTMLYLPRGLWHSTKSDQATLALNI 249 (342)
T ss_dssp EEEEECTTCEEEECTTCEEEEECSSCEEEEEE
T ss_pred eEEEECCCcEEEeCCCccEEEEECCCCceEEE
Confidence 56789999999999999999999975444333
No 249
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=90.54 E-value=0.71 Score=38.20 Aligned_cols=68 Identities=13% Similarity=0.183 Sum_probs=46.0
Q ss_pred CCCcCCCC-C--CCceEEEEEEECEE-EEEEcCC--------c--EEEEeC--CcEEEeCCCCcEEEEe-CCeEEEEEE-
Q 025000 72 ENARSALP-P--HDVERFIFVVQGSA-MLTNASG--------V--SSKLMV--DSYTYLPPNFAHSLRA-EGSATLVVF- 133 (259)
Q Consensus 72 Pg~~~~~h-~--~~~Eef~yVl~G~l-~v~v~~g--------e--~~~L~~--Gd~i~~p~~~~H~~~N-~~~a~~l~v- 133 (259)
+|.--+.| + +....++.|++|++ .+.+ |. + ...|.+ ...+|+|+|..|.|.+ +..+.+++.
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~v-D~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~ 136 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAV-DLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKT 136 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEE-ECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEE
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEeC
Confidence 55444556 3 46789999999996 5555 22 2 356766 4789999999999999 444555543
Q ss_pred EEecccc
Q 025000 134 ERRYASL 140 (259)
Q Consensus 134 ~~~y~p~ 140 (259)
...|.|.
T Consensus 137 s~~Y~p~ 143 (184)
T 2ixk_A 137 TDFWAPE 143 (184)
T ss_dssp SSCCCGG
T ss_pred CCccChh
Confidence 4555553
No 250
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=90.37 E-value=1.1 Score=37.78 Aligned_cols=79 Identities=16% Similarity=0.188 Sum_probs=50.5
Q ss_pred cEEEEEEEe--cCCCcCCCCC----CCceEEEEEEECEE-EEEE--cCC-------cEEEEeC--CcEEEeCCCCcEEEE
Q 025000 62 HFVMYLANM--QENARSALPP----HDVERFIFVVQGSA-MLTN--ASG-------VSSKLMV--DSYTYLPPNFAHSLR 123 (259)
Q Consensus 62 ~f~~~~~~l--~Pg~~~~~h~----~~~Eef~yVl~G~l-~v~v--~~g-------e~~~L~~--Gd~i~~p~~~~H~~~ 123 (259)
.|.+..... .+|.--+.|. +...+++.|++|++ .+.+ ..+ ....|.+ +-.+|||+|..|.|.
T Consensus 67 ~f~Q~n~S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~ 146 (205)
T 3ryk_A 67 SFVQDNVSYSAEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFC 146 (205)
T ss_dssp CCCEEEEEEESSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEE
T ss_pred CeeEEEEEEeCCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEE
Confidence 344443333 3555445552 35789999999996 3444 112 3457876 789999999999999
Q ss_pred e-CCeEEEE-EEEEecccc
Q 025000 124 A-EGSATLV-VFERRYASL 140 (259)
Q Consensus 124 N-~~~a~~l-~v~~~y~p~ 140 (259)
+ ...+.++ +....|.|.
T Consensus 147 ~Lsd~a~~~Y~~s~~Y~p~ 165 (205)
T 3ryk_A 147 TLVPHTIVMYKVDEYYSAD 165 (205)
T ss_dssp ECSSSEEEEEEESSCCCTT
T ss_pred EcCCCEEEEEEcCCCcCCC
Confidence 9 4445544 445556653
No 251
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=90.27 E-value=0.76 Score=40.71 Aligned_cols=67 Identities=9% Similarity=0.154 Sum_probs=47.7
Q ss_pred EEEecCCcccCcce-eeccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCC--CccEEEE
Q 025000 183 IMDFQPGDFLNVKE-VHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG--KTRTRYL 249 (259)
Q Consensus 183 ~~t~~PG~~~~~~~-~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G--~e~~~fi 249 (259)
.++|+.|..+.... .-..|=++..|.|+|.+..+|+.+.+.+-|.+|++.|..-...+.. ..|++|.
T Consensus 61 ~l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 61 ELEIILDKELGVDYFLERRELGVINIGGPGFIEIDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp CEECCCSGGGTSSSTTTTEEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred eEEcCCCceecccccCCCcEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 46677777665411 2344455778999999999999999999999999999874444432 2455544
No 252
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=90.25 E-value=2.2 Score=36.45 Aligned_cols=63 Identities=10% Similarity=0.136 Sum_probs=44.2
Q ss_pred cCCcccCcceeec---cceEEEEEEceE-EEEeCC--------EEEEcc--C--CcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 187 QPGDFLNVKEVHY---NQHGLLLLEGQG-IYRLGD--------SWYPVQ--A--GDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 187 ~PG~~~~~~~~H~---~eh~~~il~G~g-~~~~~g--------~~~~v~--~--GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+|.-=+.|-|.. +...+.|++|+. .+.+|. +|..+. + .-.+|+|+|+.|+|.|.+++ .+++|
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 4777767655543 678899999996 444442 355542 3 57899999999999999876 44443
No 253
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=89.84 E-value=2.6 Score=35.45 Aligned_cols=67 Identities=9% Similarity=0.062 Sum_probs=46.4
Q ss_pred EEEEecCCcccCcceee---ccceEEEEEEceE-EEEeC--------CEEE--Ecc--CCcEEEeCCCCceeEEeCCCcc
Q 025000 182 HIMDFQPGDFLNVKEVH---YNQHGLLLLEGQG-IYRLG--------DSWY--PVQ--AGDVLWMAPFVPQWYAALGKTR 245 (259)
Q Consensus 182 ~~~t~~PG~~~~~~~~H---~~eh~~~il~G~g-~~~~~--------g~~~--~v~--~GD~i~~~~~~~H~~~n~G~e~ 245 (259)
..++..+|.-=+.|-|. .+..-+.|++|+. .+.+| |+|. .+. .+-.+|+|+|+.|+|.|.++.
T Consensus 73 ~S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~- 151 (205)
T 3ryk_A 73 VSYSAEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH- 151 (205)
T ss_dssp EEEESSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-
T ss_pred EEEeCCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-
Confidence 34445688887776554 3668899999996 22222 3444 344 368999999999999999864
Q ss_pred EEEE
Q 025000 246 TRYL 249 (259)
Q Consensus 246 ~~fi 249 (259)
..++
T Consensus 152 a~~~ 155 (205)
T 3ryk_A 152 TIVM 155 (205)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 254
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=89.75 E-value=1.2 Score=37.28 Aligned_cols=69 Identities=23% Similarity=0.402 Sum_probs=46.3
Q ss_pred cCCCcCCCCC----CCceEEEEEEECEE-EEEEcCC----------cEEEEeC--CcEEEeCCCCcEEEEe-CCeEEEEE
Q 025000 71 QENARSALPP----HDVERFIFVVQGSA-MLTNASG----------VSSKLMV--DSYTYLPPNFAHSLRA-EGSATLVV 132 (259)
Q Consensus 71 ~Pg~~~~~h~----~~~Eef~yVl~G~l-~v~v~~g----------e~~~L~~--Gd~i~~p~~~~H~~~N-~~~a~~l~ 132 (259)
.+|.--+.|. +....++.|++|++ .+.+ |. ..+.|.+ ...+|||+|..|.|.| ...+.+++
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAV-DVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEE-ECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEE
Confidence 3443335552 34689999999998 5555 22 3357776 6889999999999999 44555544
Q ss_pred E-EEecccc
Q 025000 133 F-ERRYASL 140 (259)
Q Consensus 133 v-~~~y~p~ 140 (259)
. ...|.|.
T Consensus 152 ~~s~~Y~p~ 160 (196)
T 1wlt_A 152 ITHNEYSPP 160 (196)
T ss_dssp EESSCCCGG
T ss_pred EeCCcCChh
Confidence 3 4555553
No 255
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=89.75 E-value=0.99 Score=34.79 Aligned_cols=51 Identities=22% Similarity=0.311 Sum_probs=40.5
Q ss_pred CCceEEEEEEECEEEEEE-c-CC-----cEEEEeCCcEEEeCCCCcEEEEeCCeEEEE
Q 025000 81 HDVERFIFVVQGSAMLTN-A-SG-----VSSKLMVDSYTYLPPNFAHSLRAEGSATLV 131 (259)
Q Consensus 81 ~~~Eef~yVl~G~l~v~v-~-~g-----e~~~L~~Gd~i~~p~~~~H~~~N~~~a~~l 131 (259)
.+.-.-+-||+|+++... . ++ +...+.+|+...+||...|++..+.++++-
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~ 93 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFN 93 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEE
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEE
Confidence 677778899999999984 2 12 457899999999999999999975555543
No 256
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=89.74 E-value=2.3 Score=40.33 Aligned_cols=72 Identities=18% Similarity=0.307 Sum_probs=50.7
Q ss_pred EEEecCCCcC--CCCCCCceEEEEEEECEEEEEEcC--C----------------------cEEEEeCCcEEEeCCCCcE
Q 025000 67 LANMQENARS--ALPPHDVERFIFVVQGSAMLTNAS--G----------------------VSSKLMVDSYTYLPPNFAH 120 (259)
Q Consensus 67 ~~~l~Pg~~~--~~h~~~~Eef~yVl~G~l~v~v~~--g----------------------e~~~L~~Gd~i~~p~~~~H 120 (259)
-+-+.|+++. +.|....+-|+.-+.|+=...+.. . .+.+|++||.+|+|+|..|
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred eEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 3445566654 467777888988889987776611 0 1579999999999999999
Q ss_pred EEEeC-CeEEEEEEEEecc
Q 025000 121 SLRAE-GSATLVVFERRYA 138 (259)
Q Consensus 121 ~~~N~-~~a~~l~v~~~y~ 138 (259)
..++. ....+.+-...|+
T Consensus 247 ~~~s~~~~~SlhlTi~~~~ 265 (489)
T 4diq_A 247 QAECQDGVHSLHLTLSTYQ 265 (489)
T ss_dssp EEEBCSSCCEEEEEEEECT
T ss_pred EEEecCCCceEEEeecccC
Confidence 99983 3344555444444
No 257
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=89.32 E-value=1.8 Score=40.52 Aligned_cols=55 Identities=18% Similarity=0.195 Sum_probs=42.8
Q ss_pred ecCCCcC--CCCCCCceEEEEEEECEEEEEE-cC-------------------CcEEEEeCCcEEEeCCCCcEEEEe
Q 025000 70 MQENARS--ALPPHDVERFIFVVQGSAMLTN-AS-------------------GVSSKLMVDSYTYLPPNFAHSLRA 124 (259)
Q Consensus 70 l~Pg~~~--~~h~~~~Eef~yVl~G~l~v~v-~~-------------------ge~~~L~~Gd~i~~p~~~~H~~~N 124 (259)
+.|+++. +.|....+-|+..+.|+=+..+ .. ....+|+|||.+|+|+|..|..++
T Consensus 145 ~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 145 ITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred ECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3455544 4676778899999999987775 11 125799999999999999999997
No 258
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=89.08 E-value=0.53 Score=39.55 Aligned_cols=52 Identities=13% Similarity=0.079 Sum_probs=38.8
Q ss_pred CceEEEEEEECEEEEEEcC-CcEEEEeCCcEEEeCCCCcE---EEEeCCeEEEEEEE
Q 025000 82 DVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAH---SLRAEGSATLVVFE 134 (259)
Q Consensus 82 ~~Eef~yVl~G~l~v~v~~-ge~~~L~~Gd~i~~p~~~~H---~~~N~~~a~~l~v~ 134 (259)
...-++||++|++++.+ + ++...|.++|++.+.....- .+..++.++++++.
T Consensus 139 ~~~~~v~~l~G~~~v~~-~~~~~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~ 194 (200)
T 1yll_A 139 ASTLLLFAQQDGVAISL-QGQPRGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVE 194 (200)
T ss_dssp CSEEEEEESSSCEEEEE-TTEEEEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEE
T ss_pred CCEEEEEEccCcEEEEc-CCCceeecCCCCEEEEeCCCccceeEeccCCceEEEEEE
Confidence 45679999999999998 6 57899999999999776544 33335555655553
No 259
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=88.84 E-value=0.9 Score=41.07 Aligned_cols=26 Identities=23% Similarity=0.190 Sum_probs=23.8
Q ss_pred EEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
-...++|||++|+|+|-.|...|.++
T Consensus 261 ~~~~l~pGD~LyiP~gWwH~V~~l~d 286 (349)
T 3d8c_A 261 YETVVGPGDVLYIPMYWWHHIESLLN 286 (349)
T ss_dssp EEEEECTTCEEEECTTCEEEEEECTT
T ss_pred EEEEECCCCEEEECCCCcEEEEEcCC
Confidence 56788999999999999999999974
No 260
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.52 E-value=0.23 Score=45.79 Aligned_cols=29 Identities=7% Similarity=-0.058 Sum_probs=24.7
Q ss_pred eCCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 215 LGDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 215 ~~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
+..-...-++||+||+|+||+|+..|..+
T Consensus 290 v~~~~~~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 290 VRTCTLIQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp CCCEEEEEETTCEEEECTTCEEEEEESSE
T ss_pred CeeEEEEEcCCCEEEecCCCHHHHhcccc
Confidence 35556677899999999999999999975
No 261
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=88.18 E-value=2.2 Score=32.43 Aligned_cols=82 Identities=7% Similarity=-0.024 Sum_probs=59.8
Q ss_pred ceEEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC--EEEEccCCcEEEeCCCCceeEEe
Q 025000 163 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--SWYPVQAGDVLWMAPFVPQWYAA 240 (259)
Q Consensus 163 ~~~~~~~l~p~~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g--~~~~v~~GD~i~~~~~~~H~~~n 240 (259)
|++..+-+.-.|... .. +=.+.||.. ||.=.-...|.+=|++|+..+.|.| +|...++|+..-+|.+..=.++.
T Consensus 24 GkV~S~~~~~~dG~~-kT--lGVm~PGe~-~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv 99 (111)
T 3hqx_A 24 GLCISHTVQFEDGTK-KT--LGVILPTEQ-PLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIET 99 (111)
T ss_dssp TTEEEEEEECTTSCE-EE--EEEECCCSS-CEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEEC
T ss_pred CeEEEEEEEeCCCCE-EE--EEEEecccc-ceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEE
Confidence 456666665444322 12 223468861 1222334558999999999999999 69999999999999999888886
Q ss_pred CCCccEEEEE
Q 025000 241 LGKTRTRYLL 250 (259)
Q Consensus 241 ~G~e~~~fi~ 250 (259)
. ++..|+|
T Consensus 100 ~--~~~~Y~C 107 (111)
T 3hqx_A 100 D--EVLDYVC 107 (111)
T ss_dssp S--SCEEEEE
T ss_pred C--cceeEEE
Confidence 5 8999999
No 262
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=88.09 E-value=2.6 Score=35.94 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=46.2
Q ss_pred cCCCcCCCCC----CCceEEEEEEECEE-EEEEcCC----------cEEEEeCC--cEEEeCCCCcEEEEe-CCeEEEEE
Q 025000 71 QENARSALPP----HDVERFIFVVQGSA-MLTNASG----------VSSKLMVD--SYTYLPPNFAHSLRA-EGSATLVV 132 (259)
Q Consensus 71 ~Pg~~~~~h~----~~~Eef~yVl~G~l-~v~v~~g----------e~~~L~~G--d~i~~p~~~~H~~~N-~~~a~~l~ 132 (259)
.+|---+.|. +....++.|++|++ .+.+ |. ..+.|.+. ..+|||+|..|.|.| ...+.+++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVV-DIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEE-CCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEE-ECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEE
Confidence 3444335552 34689999999996 5666 32 23577764 789999999999999 44454444
Q ss_pred -EEEecccc
Q 025000 133 -FERRYASL 140 (259)
Q Consensus 133 -v~~~y~p~ 140 (259)
....|.|.
T Consensus 153 ~~s~~Y~p~ 161 (225)
T 1upi_A 153 LCSAEYNPQ 161 (225)
T ss_dssp EESSCCCTT
T ss_pred ecCCccCHH
Confidence 45566653
No 263
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=87.94 E-value=2.2 Score=36.16 Aligned_cols=63 Identities=8% Similarity=0.140 Sum_probs=43.5
Q ss_pred cCCcccCcceeec---cceEEEEEEceEE-EEeC--------CEEEEc--cC--CcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 187 QPGDFLNVKEVHY---NQHGLLLLEGQGI-YRLG--------DSWYPV--QA--GDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 187 ~PG~~~~~~~~H~---~eh~~~il~G~g~-~~~~--------g~~~~v--~~--GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
.+|..=+.|-|+. +...+.|++|+.. +.+| |+|..+ .+ .-.+|+|+|+.|+|.|.+++ .+++|
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4787777655543 6788999999963 3332 235554 33 47899999999999999876 44433
No 264
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=87.81 E-value=2.2 Score=35.67 Aligned_cols=65 Identities=9% Similarity=0.103 Sum_probs=45.8
Q ss_pred EEEecCCcccCcceeeccceEEEEEE-ceE--EEEeC------CEEE--EccCCcEEEeCCCCceeEEeCCCccEEEEE
Q 025000 183 IMDFQPGDFLNVKEVHYNQHGLLLLE-GQG--IYRLG------DSWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLL 250 (259)
Q Consensus 183 ~~t~~PG~~~~~~~~H~~eh~~~il~-G~g--~~~~~------g~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 250 (259)
..+ .+|.-=+.| -|.+..-+.|++ |+. +..+. |+|. .+..+-.+|+|+|+.|+|.+.++. .+++|
T Consensus 65 S~s-~~GvlRGlH-~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y 140 (197)
T 1nxm_A 65 SFS-RKNVLRGLH-AEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSY 140 (197)
T ss_dssp EEE-ETTBEEEEE-ECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEE
T ss_pred EEC-CCCCcceee-ecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEE
Confidence 344 677777764 457778899999 993 33333 4454 455788999999999999999764 44443
No 265
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=87.73 E-value=2.3 Score=35.71 Aligned_cols=58 Identities=19% Similarity=0.351 Sum_probs=41.3
Q ss_pred CceEEEEEEECEE-EEEEcCC----------cEEEEeCC--cEEEeCCCCcEEEEe-CCeEEEEE-EEEecccc
Q 025000 82 DVERFIFVVQGSA-MLTNASG----------VSSKLMVD--SYTYLPPNFAHSLRA-EGSATLVV-FERRYASL 140 (259)
Q Consensus 82 ~~Eef~yVl~G~l-~v~v~~g----------e~~~L~~G--d~i~~p~~~~H~~~N-~~~a~~l~-v~~~y~p~ 140 (259)
....++.|++|++ .+.+ |. ....|.+. ..+|||+|..|.|.+ +..+.+++ ....|.|.
T Consensus 70 ~q~Klv~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~~Y~p~ 142 (205)
T 1oi6_A 70 GTAKYVYCARGKAMDIVI-DIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQ 142 (205)
T ss_dssp CCCEEEEEEESCEEEEEE-CCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGG
T ss_pred CCceEEEEeCCEEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEecCCccCHh
Confidence 4689999999996 5555 32 23567764 789999999999999 44455444 45566653
No 266
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=86.70 E-value=7.2 Score=35.31 Aligned_cols=69 Identities=20% Similarity=0.246 Sum_probs=43.4
Q ss_pred cEEEEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcC--CcE--EEEeCCcEEEeCCCCcEEEEeCCeEEEEEE
Q 025000 62 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNAS--GVS--SKLMVDSYTYLPPNFAHSLRAEGSATLVVF 133 (259)
Q Consensus 62 ~f~~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~--ge~--~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v 133 (259)
++.-+.+++.-+...-.-..-+|.=+.|.+|+++++. + +.+ ..|+++|++|+.|=++|.|+-.+ ++|.+
T Consensus 333 dl~g~~l~Vd~~d~~~DL~d~ge~hY~v~~G~lTL~W-~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~G--tVlkL 405 (443)
T 3g7d_A 333 DLVGSFLRVDADGRGADLIDHAENHYVVTEGRLTLEW-DGPDGPASVELEPDGSAWTGPFVRHRWHGTG--TVLKF 405 (443)
T ss_dssp TCEEEEEEEC------CBCCSSEEEEEEEESCEEEEE-EETTEEEEEEECTTCEEEECTTCCEEEESSE--EEEEE
T ss_pred CceeEEEEecCCCcchhhhhcccceEEEecCceEEEe-cCCCCccceEECCCCceeecccccccccCCc--eEEEe
Confidence 3444555554322221113334555669999999998 4 333 58999999999999999998433 44443
No 267
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=86.34 E-value=3.4 Score=36.99 Aligned_cols=55 Identities=11% Similarity=0.146 Sum_probs=41.1
Q ss_pred CCCcCCCCCCCceEEEEEEECEEEEEEc------------------C----------------CcEEEEeCCcEEEeCCC
Q 025000 72 ENARSALPPHDVERFIFVVQGSAMLTNA------------------S----------------GVSSKLMVDSYTYLPPN 117 (259)
Q Consensus 72 Pg~~~~~h~~~~Eef~yVl~G~l~v~v~------------------~----------------ge~~~L~~Gd~i~~p~~ 117 (259)
+|+.+..|....+-|+.++.|+=+..+- + ..+.+|+|||.+|+|+|
T Consensus 176 ~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~g 255 (338)
T 3al5_A 176 PGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPAL 255 (338)
T ss_dssp TTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTT
T ss_pred CCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCC
Confidence 4444456766667888888888666541 0 13579999999999999
Q ss_pred CcEEEEeCC
Q 025000 118 FAHSLRAEG 126 (259)
Q Consensus 118 ~~H~~~N~~ 126 (259)
-.|..+|.+
T Consensus 256 WwH~v~~l~ 264 (338)
T 3al5_A 256 WFHNVISEE 264 (338)
T ss_dssp CEEEEEESS
T ss_pred CeEEEeeCC
Confidence 999999944
No 268
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=85.95 E-value=2.9 Score=34.42 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=45.5
Q ss_pred CCCcCCCCC----CCceEEEEEEECEE-EEEEc---C----C--cEEEEeC--CcEEEeCCCCcEEEEe-CCeEEEEEE-
Q 025000 72 ENARSALPP----HDVERFIFVVQGSA-MLTNA---S----G--VSSKLMV--DSYTYLPPNFAHSLRA-EGSATLVVF- 133 (259)
Q Consensus 72 Pg~~~~~h~----~~~Eef~yVl~G~l-~v~v~---~----g--e~~~L~~--Gd~i~~p~~~~H~~~N-~~~a~~l~v- 133 (259)
+|.--+.|. +....+++|++|++ .+.++ + | ....|.+ ...+|+|+|..|.|.+ +..+.+++.
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~ 135 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKA 135 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEc
Confidence 554445552 26789999999996 45541 1 1 2356766 4789999999999999 444555443
Q ss_pred EEecccc
Q 025000 134 ERRYASL 140 (259)
Q Consensus 134 ~~~y~p~ 140 (259)
...|.|.
T Consensus 136 s~~Y~p~ 142 (183)
T 1dzr_A 136 TNYYSPS 142 (183)
T ss_dssp SSCCCTT
T ss_pred CCccCHh
Confidence 4556553
No 269
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=84.76 E-value=1.4 Score=35.60 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=45.6
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEE----e-CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTY----L-PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~----~-p~~~~H~~~N~~~a~~l~v~ 134 (259)
...+.||...-......+.+++|++|++++...+|+...+++||++= + ......+.+..+.++++.+.
T Consensus 97 ~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~ 169 (202)
T 3bpz_A 97 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLS 169 (202)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEE
T ss_pred ceEECCCCEEEECCCcCCeEEEEeccEEEEEECCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEE
Confidence 44667776542222345789999999999976456778999999862 1 11224455567778888774
No 270
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=84.38 E-value=1.8 Score=38.17 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=38.5
Q ss_pred cceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCC--ccEEEE
Q 025000 200 NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK--TRTRYL 249 (259)
Q Consensus 200 ~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~--e~~~fi 249 (259)
.|=++..|.|+|.+..+|+.+++.+-|.+|++.|..-......+ .|++|.
T Consensus 79 rE~~iV~l~G~~~V~vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 79 RELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp EEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred cEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 34457789999999999999999999999999999744444333 355553
No 271
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=83.62 E-value=2.8 Score=35.49 Aligned_cols=69 Identities=16% Similarity=0.176 Sum_probs=45.9
Q ss_pred cCCCcCCCCC----CCceEEEEEEECEE-EEEEcCC----------cEEEEeCC--cEEEeCCCCcEEEEe-CCeEEEEE
Q 025000 71 QENARSALPP----HDVERFIFVVQGSA-MLTNASG----------VSSKLMVD--SYTYLPPNFAHSLRA-EGSATLVV 132 (259)
Q Consensus 71 ~Pg~~~~~h~----~~~Eef~yVl~G~l-~v~v~~g----------e~~~L~~G--d~i~~p~~~~H~~~N-~~~a~~l~ 132 (259)
.+|---+.|. +....++.|++|++ .+.+ |. ..+.|.+. ..+|||+|..|.|.| +..+.+++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVV-DLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEE-ECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEE
Confidence 3554335552 34689999999996 4555 22 33577775 789999999999999 44454444
Q ss_pred -EEEecccc
Q 025000 133 -FERRYASL 140 (259)
Q Consensus 133 -v~~~y~p~ 140 (259)
....|.|.
T Consensus 142 ~~s~~Y~p~ 150 (216)
T 2c0z_A 142 LSSGTYDPA 150 (216)
T ss_dssp EESSCCCTT
T ss_pred ecCCccCHH
Confidence 45556553
No 272
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=83.56 E-value=1.5 Score=41.13 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=22.8
Q ss_pred EEEEccCCcEEEeCCCCceeEEeCC
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
....++|||++|+|+|..|...+.+
T Consensus 199 ~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 199 HEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCS
T ss_pred eEEEECCCcEEEECCCceEEEEecC
Confidence 4678999999999999999999885
No 273
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=83.02 E-value=1.5 Score=39.27 Aligned_cols=27 Identities=19% Similarity=0.118 Sum_probs=24.0
Q ss_pred EEEEccCCcEEEeCCCCceeEEeCCCc
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAALGKT 244 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~G~e 244 (259)
....++|||++|+|+|-.|...|.+..
T Consensus 240 ~~~~L~pGD~LyiP~gWwH~v~~l~~s 266 (338)
T 3al5_A 240 YECSLEAGDVLFIPALWFHNVISEEFG 266 (338)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEEECCCCEEEECCCCeEEEeeCCCE
Confidence 467889999999999999999999653
No 274
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=82.88 E-value=2.6 Score=37.95 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=41.7
Q ss_pred CCCcCCCCCCCceEEEEEEECEEEEEE-c--------------------------------------CCcEEEEeCCcEE
Q 025000 72 ENARSALPPHDVERFIFVVQGSAMLTN-A--------------------------------------SGVSSKLMVDSYT 112 (259)
Q Consensus 72 Pg~~~~~h~~~~Eef~yVl~G~l~v~v-~--------------------------------------~ge~~~L~~Gd~i 112 (259)
+|+.++.|....+-+..++.|+=++.+ . ...+.+|+|||.+
T Consensus 192 ~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~L 271 (349)
T 3d8c_A 192 EGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVL 271 (349)
T ss_dssp TTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEE
T ss_pred CCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEE
Confidence 444556777667889999999876664 0 0135799999999
Q ss_pred EeCCCCcEEEEeC
Q 025000 113 YLPPNFAHSLRAE 125 (259)
Q Consensus 113 ~~p~~~~H~~~N~ 125 (259)
|+|+|--|..+|.
T Consensus 272 yiP~gWwH~V~~l 284 (349)
T 3d8c_A 272 YIPMYWWHHIESL 284 (349)
T ss_dssp EECTTCEEEEEEC
T ss_pred EECCCCcEEEEEc
Confidence 9999999999993
No 275
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=82.39 E-value=5.5 Score=30.57 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=39.8
Q ss_pred eEEEEEEceEEEEe-C-------CEEEEccCCcEEEeCCCCceeEEeCCCccE--EEEEE
Q 025000 202 HGLLLLEGQGIYRL-G-------DSWYPVQAGDVLWMAPFVPQWYAALGKTRT--RYLLY 251 (259)
Q Consensus 202 h~~~il~G~g~~~~-~-------g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~--~fi~~ 251 (259)
--+-||+|+..|+. + .+..-+.+|+..+++|..+|-++.++|-.| .|.|=
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~leFyc~ 99 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFNINFWSD 99 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEEEEEEEC
Confidence 44889999999994 3 367788999999999999999997766543 45543
No 276
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=81.89 E-value=1.7 Score=39.38 Aligned_cols=43 Identities=16% Similarity=0.373 Sum_probs=34.3
Q ss_pred cceEEEEEEceEEEEeCC----EEEEccCCcEEEeCCCCceeEEeCC
Q 025000 200 NQHGLLLLEGQGIYRLGD----SWYPVQAGDVLWMAPFVPQWYAALG 242 (259)
Q Consensus 200 ~eh~~~il~G~g~~~~~g----~~~~v~~GD~i~~~~~~~H~~~n~G 242 (259)
-||-|.|++|.-.++-|+ -...++|+|-.|++|+++|++..+|
T Consensus 354 ge~hY~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~G 400 (443)
T 3g7d_A 354 AENHYVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWHGTG 400 (443)
T ss_dssp SEEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEESSE
T ss_pred ccceEEEecCceEEEecCCCCccceEECCCCceeecccccccccCCc
Confidence 346688999988887662 3456899999999999999999554
No 277
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=81.38 E-value=1.6 Score=32.55 Aligned_cols=68 Identities=9% Similarity=0.197 Sum_probs=43.9
Q ss_pred EEEec-CCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEeCC---CCcE--EE-EeCCeEEEEEEE
Q 025000 67 LANMQ-ENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPP---NFAH--SL-RAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~-Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~p~---~~~H--~~-~N~~~a~~l~v~ 134 (259)
...+. +|...-......+.+++|++|.+.+...+|+...+.+||++=..+ +.++ .. ...++++++.+.
T Consensus 41 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i~ 115 (134)
T 2d93_A 41 FEVVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCIA 115 (134)
T ss_dssp EEEECSSSCEEECTTCEECEEEECCBSCEEEECSSSCEEEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEEE
T ss_pred EEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCCCcEEEecCCCccChhHhcCCCcceeEEEEEecceEEEEEe
Confidence 45566 665432223446779999999999886457778999999763221 2222 33 446677777774
No 278
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=81.13 E-value=8.9 Score=32.03 Aligned_cols=57 Identities=18% Similarity=0.277 Sum_probs=40.6
Q ss_pred CceEEEEEEECEE-EEEEcCC----------cEEEEeC--CcEEEeCCCCcEEEEe-CCeEEEEE-EEEeccc
Q 025000 82 DVERFIFVVQGSA-MLTNASG----------VSSKLMV--DSYTYLPPNFAHSLRA-EGSATLVV-FERRYAS 139 (259)
Q Consensus 82 ~~Eef~yVl~G~l-~v~v~~g----------e~~~L~~--Gd~i~~p~~~~H~~~N-~~~a~~l~-v~~~y~p 139 (259)
....++.|++|++ .|-+ |- ....|.+ +-.+|||+|..|.|.+ +..+.++. +...|.|
T Consensus 67 ~q~KlV~~~~G~v~DV~V-DlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~~t~~Y~p 138 (201)
T 4hn1_A 67 GQAKYSVCVRGAGLDVVV-DVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFLCSSGYAP 138 (201)
T ss_dssp CCCEEEEEEESEEEEEEE-CCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEEESSCCCG
T ss_pred CceEEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEeCCCCcCh
Confidence 6789999999995 4444 32 2457776 7899999999999999 44455543 3444555
No 279
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=81.12 E-value=3.4 Score=30.74 Aligned_cols=67 Identities=7% Similarity=-0.031 Sum_probs=44.4
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. +|+. ..+.+||++=. ........+..++++++.+.
T Consensus 48 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~g~~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i~ 120 (139)
T 3ocp_A 48 PVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAID 120 (139)
T ss_dssp EEEECSSCEEECTTSCCCEEEEEEECCEEEEE-TTEEEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEEE
T ss_pred EEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE-CCEEEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEEc
Confidence 45566665442223456889999999999987 7765 58999997632 22233345556678887774
No 280
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=80.97 E-value=1.4 Score=32.80 Aligned_cols=65 Identities=8% Similarity=-0.034 Sum_probs=44.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEEEe-----CCCCceeEEeCCCccE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWM-----APFVPQWYAALGKTRT 246 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~-----~~~~~H~~~n~G~e~~ 246 (259)
.++..++++|..+-. +-....+.|+|++|...+...+ ...+.+||++-. ..-....+.+..+..+
T Consensus 33 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~ 102 (138)
T 1vp6_A 33 ALRARTVPAGAVICR-IGEPGDRMFFVVEGSVSVATPN-PVELGPGAFFGEMALISGEPRSATVSAATTVSL 102 (138)
T ss_dssp HCEEEEECTTCEEEC-TTSCCCEEEEEEESCEEECSSS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEE
T ss_pred hhcEEEeCCCCEEEe-CCCCcceEEEEEeeEEEEEeCC-cceECCCCEeeehHhccCCCceeEEEECCCEEE
Confidence 346788999998843 4445568899999999998777 568899998532 1123455666554333
No 281
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=80.91 E-value=1.5 Score=32.66 Aligned_cols=48 Identities=8% Similarity=0.043 Sum_probs=36.9
Q ss_pred EEEEEEec-CCcccCcceeeccceEEEEEEceEEEEe-CCEEEEccCCcEE
Q 025000 180 NIHIMDFQ-PGDFLNVKEVHYNQHGLLLLEGQGIYRL-GDSWYPVQAGDVL 228 (259)
Q Consensus 180 ~~~~~t~~-PG~~~~~~~~H~~eh~~~il~G~g~~~~-~g~~~~v~~GD~i 228 (259)
.+...+++ +|..+= .+-....+.|+|++|...+.. +|+...+.+||++
T Consensus 38 ~~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~g~~~~l~~G~~f 87 (134)
T 2d93_A 38 VMIFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISHPDGKVENLFMGNSF 87 (134)
T ss_dssp TEEEEEECSSSCEEE-CTTCEECEEEECCBSCEEEECSSSCEEEECTTCEE
T ss_pred hheEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEcCCCcEEEecCCCcc
Confidence 46788888 998873 344455578999999998775 5677889999976
No 282
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=80.87 E-value=3.3 Score=31.55 Aligned_cols=67 Identities=9% Similarity=-0.010 Sum_probs=44.6
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. +|+. ..+.+||++=. ...........++++++.+.
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~ 135 (154)
T 3pna_A 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGID 135 (154)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEEEE-TTEEEEEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEEE
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEE-CCEEEEEecCCCEeeehHhhcCCCcceEEEECcceEEEEEe
Confidence 45667775443223456899999999999998 7765 57999998632 11223344456677777764
No 283
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=80.55 E-value=10 Score=28.43 Aligned_cols=67 Identities=16% Similarity=0.038 Sum_probs=45.5
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEeCC-------CCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP-------NFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~p~-------~~~H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+++.. +++. ..+.+||++=..+ ......+..++++++.+.
T Consensus 52 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i~ 126 (160)
T 4f8a_A 52 TVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ-DDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVIK 126 (160)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEE-TTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEEE
T ss_pred eeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE-CCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEEc
Confidence 35566665432223456899999999999998 6655 5899999886432 223345557778888774
No 284
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=80.53 E-value=2 Score=39.60 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=22.9
Q ss_pred CCcEEEEeCCcEEEeCCCCcEEEEeCC
Q 025000 100 SGVSSKLMVDSYTYLPPNFAHSLRAEG 126 (259)
Q Consensus 100 ~ge~~~L~~Gd~i~~p~~~~H~~~N~~ 126 (259)
..=++.-++||.|+||+|-+|+.+|-.
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~ 317 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFH 317 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESS
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhccc
Confidence 344567899999999999999999954
No 285
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=80.00 E-value=2.9 Score=31.89 Aligned_cols=48 Identities=13% Similarity=0.250 Sum_probs=37.6
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEE-EEccCCcEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW-YPVQAGDVL 228 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~-~~v~~GD~i 228 (259)
.+...++++|..+= .+-....+.|+|++|...+..+|+. ..+.+||++
T Consensus 60 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~f 108 (154)
T 3pna_A 60 AMFPVSFIAGETVI-QQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSF 108 (154)
T ss_dssp HCEEEEECTTCEEE-CTTSCCCEEEEEEESCEEEEETTEEEEEECTTCEE
T ss_pred hceEEEECCCCEEE-eCCCCCCeEEEEEecEEEEEECCEEEEEecCCCEe
Confidence 46678899999883 3555566889999999999988854 558899985
No 286
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=79.71 E-value=12 Score=31.24 Aligned_cols=61 Identities=8% Similarity=0.179 Sum_probs=42.8
Q ss_pred cCCcccCcceee---ccceEEEEEEceE-EEEeC--------CEEEE--cc--CCcEEEeCCCCceeEEeCCCccEEE
Q 025000 187 QPGDFLNVKEVH---YNQHGLLLLEGQG-IYRLG--------DSWYP--VQ--AGDVLWMAPFVPQWYAALGKTRTRY 248 (259)
Q Consensus 187 ~PG~~~~~~~~H---~~eh~~~il~G~g-~~~~~--------g~~~~--v~--~GD~i~~~~~~~H~~~n~G~e~~~f 248 (259)
.+|.-=+.|-|. .+..-+.|++|+. .+.+| |+|.. +. .+-.+|+|+|+-|+|.+.+++ .++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~ 128 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATL 128 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEE
Confidence 678877765554 4667789999995 33333 34443 33 467999999999999999864 444
No 287
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=79.32 E-value=5.4 Score=33.62 Aligned_cols=152 Identities=11% Similarity=0.034 Sum_probs=84.2
Q ss_pred EEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEe---CCCC--cEEEEeCCeEEEEEEEEe-cc
Q 025000 66 YLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYL---PPNF--AHSLRAEGSATLVVFERR-YA 138 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~---p~~~--~H~~~N~~~a~~l~v~~~-y~ 138 (259)
....+++|...-......+.+++|++|.+.+.. +|+. ..+.+||++=- -.+. ..+....++++++.+.+. |.
T Consensus 63 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~g~~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~ 141 (291)
T 2qcs_B 63 FPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYR 141 (291)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECCEEEEE-TTEEEEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHH
T ss_pred cEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE-CCeEEEEcCCCCccchHHHhcCCCCceEEEECCCEEEEEEEhHHHH
Confidence 355667775543333456889999999999998 7755 68999998731 1222 344555677888777432 11
Q ss_pred ccCCCCcceee----ccCCCCCCcccCCceEEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEceEEE
Q 025000 139 SLENHITEQIV----GSTDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY 213 (259)
Q Consensus 139 p~~g~~p~~~v----~~~~di~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~ 213 (259)
.+-...|.... .-...++. +.. +...... ....+....+++|..+= .+-......|+|++|+..+
T Consensus 142 ~~~~~~~~~~~~~~~~~l~~~~l--f~~-------l~~~~~~~l~~~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~ 211 (291)
T 2qcs_B 142 RILMGSTLRKRKMYEEFLSKVSI--LES-------LDKWERLTVADALEPVQFEDGQKIV-VQGEPGDEFFIILEGSAAV 211 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGG--GTT-------CCHHHHHHHHHHCEEEEECTTCEEE-CTTSCCCEEEEEEEEEEEE
T ss_pred HHHhhhHHHHHHHHHHHHhhchH--hhh-------CCHHHHHHHHhhcEEEEECCCCEEE-eCCccCCEEEEEEeCEEEE
Confidence 00000011000 00001100 000 0000111 12335677888888873 2444445789999999988
Q ss_pred Ee---CC----EEEEccCCcEE
Q 025000 214 RL---GD----SWYPVQAGDVL 228 (259)
Q Consensus 214 ~~---~g----~~~~v~~GD~i 228 (259)
.. +| ....+.+||++
T Consensus 212 ~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 212 LQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp EEECSTTSCEEEEEEECTTCEE
T ss_pred EEecCCCCccEEEEEeCCCCEe
Confidence 73 23 35678999986
No 288
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=77.73 E-value=2.2 Score=31.86 Aligned_cols=49 Identities=20% Similarity=0.359 Sum_probs=37.7
Q ss_pred eEEEEEEceEEEEeCCEEEE--ccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 202 HGLLLLEGQGIYRLGDSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 202 h~~~il~G~g~~~~~g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
++-.+==|.|....||+..| |++||.+..+.|....++--|+ +|+++++
T Consensus 42 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dge---eyli~re 92 (100)
T 1we3_O 42 KGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGE---EYVILSE 92 (100)
T ss_dssp EEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSC---EEEEECT
T ss_pred CCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCE---EEEEEEh
Confidence 55556668888878898885 9999999999999888885443 4776654
No 289
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=77.57 E-value=4.9 Score=29.62 Aligned_cols=49 Identities=24% Similarity=0.234 Sum_probs=35.3
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCE------EEEccCCcEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS------WYPVQAGDVLW 229 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~------~~~v~~GD~i~ 229 (259)
.+...++++|..+- .+-....+.|+|++|...+.. +|+ ...+.+||++=
T Consensus 28 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 28 ISEEKSFPTGSVIF-KENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp TEEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hhcEEecCCCCEEE-eCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 36788899999884 344556688999999998874 333 45679999874
No 290
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=77.01 E-value=9.7 Score=30.13 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=44.6
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeC----CC--CcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP----PN--FAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p----~~--~~H~~~N~~~a~~l~v~~ 135 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++=.. .. ........++++++.+.+
T Consensus 21 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 100 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 100 (210)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEEcH
Confidence 34556665432223456889999999999875 24554 367999988422 22 334555677888888743
No 291
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=76.49 E-value=15 Score=29.45 Aligned_cols=67 Identities=10% Similarity=0.021 Sum_probs=45.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEEeCCcEEEeCCCCcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v-~~ge~---~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~~ 135 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=. .........++++++.+.+
T Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~~~~v~~i~~ 99 (220)
T 2fmy_A 29 EQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--HTRAFIQAMEDTTILYTDI 99 (220)
T ss_dssp EEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--CSSSEEEESSSEEEEEEEH
T ss_pred eeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--ccceEEEEcCcEEEEEEeH
Confidence 44566765442223456789999999999854 24554 47789998866 3445566677888888753
No 292
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=76.28 E-value=2.6 Score=33.90 Aligned_cols=68 Identities=16% Similarity=0.124 Sum_probs=45.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe-CCEEEEccCCcEEE-----eCCCCceeEEeCCCccEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-GDSWYPVQAGDVLW-----MAPFVPQWYAALGKTRTRY 248 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~-~g~~~~v~~GD~i~-----~~~~~~H~~~n~G~e~~~f 248 (259)
.+...++.||..|= .+-....+.|+|++|...+.. +|+...+.+||++= ...-....+.+.++..+-.
T Consensus 94 ~~~~~~~~~ge~I~-~~g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~ 167 (202)
T 3bpz_A 94 KLKFEVFQPGDYII-REGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYS 167 (202)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEE
T ss_pred hCCceEECCCCEEE-ECCCcCCeEEEEeccEEEEEECCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEE
Confidence 46788899999884 344455588999999998765 45777899999862 1222245566665444433
No 293
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=76.21 E-value=15 Score=29.52 Aligned_cols=66 Identities=9% Similarity=-0.042 Sum_probs=44.7
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEEeCCcEEEeCCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v-~~ge~---~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++= ..........++++++.+.
T Consensus 25 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~~v~~i~ 94 (222)
T 1ft9_A 25 SKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERTEVRFAD 94 (222)
T ss_dssp EEEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCEEEEEEC
T ss_pred EEEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccceEEEEEe
Confidence 45566765442223445779999999998853 25654 4778999887 3345556667788888874
No 294
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=75.65 E-value=8.1 Score=28.33 Aligned_cols=69 Identities=9% Similarity=0.081 Sum_probs=42.6
Q ss_pred EEEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCc------EEEEeCCcEEEeC---CCCcE--EEEeCCeEEEEE
Q 025000 66 YLANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGV------SSKLMVDSYTYLP---PNFAH--SLRAEGSATLVV 132 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge------~~~L~~Gd~i~~p---~~~~H--~~~N~~~a~~l~ 132 (259)
....+++|...-......+.+++|++|.+++.. .+|+ ...+.+||++=.. .+.++ +.+..++++++.
T Consensus 30 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~ 109 (142)
T 3mdp_A 30 EEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVD 109 (142)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEE
T ss_pred cEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEE
Confidence 345566775442223456899999999999864 1333 3468999987432 34444 455577788887
Q ss_pred EE
Q 025000 133 FE 134 (259)
Q Consensus 133 v~ 134 (259)
+.
T Consensus 110 i~ 111 (142)
T 3mdp_A 110 IN 111 (142)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 295
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=75.48 E-value=4.8 Score=29.89 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=37.1
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCE-EEEccCCcEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-WYPVQAGDVL 228 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~-~~~v~~GD~i 228 (259)
.+...++++|..+= .+-....+.|+|++|...+..+|+ ...+.+||++
T Consensus 45 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~g~~~~~~~~G~~f 93 (139)
T 3ocp_A 45 CMYPVEYGKDSCII-KEGDVGSLVYVMEDGKVEVTKEGVKLCTMGPGKVF 93 (139)
T ss_dssp HCEEEEECSSCEEE-CTTSCCCEEEEEEECCEEEEETTEEEEEECTTCEE
T ss_pred hcEEEecCCCCEEE-eCCCcCCEEEEEEeCEEEEEECCEEEEEeCCCCEe
Confidence 45678889999874 344556688999999999988875 3567889975
No 296
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=74.93 E-value=3.9 Score=30.38 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=35.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 228 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i 228 (259)
.+...++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 27 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 27 SMSEVTLARGDTLF-HEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp HCEEEEECTTCEEE-CTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred hceEEEeCCCCEEE-CCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 35688899999884 344455688999999998764 5654 467799986
No 297
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=74.86 E-value=2.2 Score=38.42 Aligned_cols=26 Identities=8% Similarity=-0.083 Sum_probs=23.6
Q ss_pred EEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
-...++|||++|+|+|-.|+..|.++
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 45779999999999999999999975
No 298
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=74.66 E-value=6.3 Score=31.28 Aligned_cols=49 Identities=12% Similarity=0.084 Sum_probs=36.5
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEE---eCCEE---EEccCCcEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR---LGDSW---YPVQAGDVLW 229 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~---~~g~~---~~v~~GD~i~ 229 (259)
.+...++++|..+- .+-....+.|+|++|...+. .+|++ ..+.+||++-
T Consensus 18 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 18 HCHIHKYPSKSTLI-HQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp TSEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred hcEEEEeCCCCEEE-CCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 45678899999884 34555668899999999887 35654 4469999873
No 299
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=74.58 E-value=3.3 Score=30.57 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=43.6
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~ 134 (259)
..++++|...-......+.+++|++|.+.+.. .+ ...+.+||++=. ........+..++++++.+.
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~ 106 (138)
T 1vp6_A 36 ARTVPAGAVICRIGEPGDRMFFVVEGSVSVAT-PN-PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSLH 106 (138)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEECS-SS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEEE
T ss_pred EEEeCCCCEEEeCCCCcceEEEEEeeEEEEEe-CC-cceECCCCEeeehHhccCCCceeEEEECCCEEEEEEC
Confidence 45667775442223446789999999999986 55 468999998632 11223455556778888774
No 300
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=74.54 E-value=7.1 Score=29.11 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=42.6
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEE----eCC-C-CcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY----LPP-N-FAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~----~p~-~-~~H~~~N~~~a~~l~v~~ 135 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++= +.. . ..+..+..++++++.+.+
T Consensus 37 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 116 (154)
T 2z69_A 37 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSN 116 (154)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEEEH
T ss_pred EEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEECH
Confidence 44566765442223456789999999999874 13443 4889999862 222 2 345566677888888743
No 301
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=74.48 E-value=1.8 Score=39.02 Aligned_cols=23 Identities=26% Similarity=0.601 Sum_probs=21.0
Q ss_pred EccCCcEEEeCCCCceeEEeCCC
Q 025000 221 PVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 221 ~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
.=+|||+|++.||+-||..|.|-
T Consensus 282 ~QkpGd~Vi~~PgayH~v~n~G~ 304 (332)
T 2xxz_A 282 VQRPGDLVWINAGTVHWVQATGW 304 (332)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEECCCceEEEEecce
Confidence 34899999999999999999996
No 302
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=73.65 E-value=13 Score=29.84 Aligned_cols=69 Identities=10% Similarity=0.114 Sum_probs=44.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcEE---EEeCCcEEE----e-CCCCcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVSS---KLMVDSYTY----L-PPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~~---~L~~Gd~i~----~-p~~~~H~~~N~~~a~~l~v~~ 135 (259)
...+++|...-......+.+++|++|.+.+.. .+|+.. .+.+||++= + ...........++++++.+.+
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~ 109 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDR 109 (227)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEEeH
Confidence 44566665442223456789999999999875 245543 788999873 2 122344555677888888753
No 303
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=73.22 E-value=11 Score=30.19 Aligned_cols=67 Identities=10% Similarity=0.004 Sum_probs=45.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEeCC---CC--c--EEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP---NF--A--HSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~p~---~~--~--H~~~N~~~a~~l~v~ 134 (259)
...+.||...-........+++|++|++++.. +|.. ..+++||++=-.+ +. + .+.+..+.++++.+.
T Consensus 100 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i~ 174 (212)
T 3ukn_A 100 TSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK-DNTVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYIS 174 (212)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECCEEEES-SSCEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEEE
T ss_pred eEEeCCCCEEEECCCcccEEEEEEecEEEEEE-CCeEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEEe
Confidence 44567776542223346899999999999997 7765 5899999875322 22 3 344557778888774
No 304
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=73.04 E-value=4.2 Score=32.41 Aligned_cols=68 Identities=16% Similarity=0.084 Sum_probs=43.3
Q ss_pred EEEEEecCCcccCcceeecc--ceEEEEEEceEEEEe---CCEEE---EccCCcEEEe----CCCCceeEEeCCCccEEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYN--QHGLLLLEGQGIYRL---GDSWY---PVQAGDVLWM----APFVPQWYAALGKTRTRY 248 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~--eh~~~il~G~g~~~~---~g~~~---~v~~GD~i~~----~~~~~H~~~n~G~e~~~f 248 (259)
+...++++|..+-. +-... .+.|+|++|...+.. +|+.. -+.+||++-. ..-.+..+.+..+..+-.
T Consensus 5 ~~~~~~~~g~~i~~-~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~ 83 (202)
T 2zcw_A 5 RETVSFKAGDVILY-PGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEP 83 (202)
T ss_dssp -CCEEECTTCEEEC-SBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEE
T ss_pred ceEEEECCCCEEEC-CCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEE
Confidence 44667889988743 44455 678999999998763 56554 5789998632 222345566665544444
Q ss_pred E
Q 025000 249 L 249 (259)
Q Consensus 249 i 249 (259)
|
T Consensus 84 i 84 (202)
T 2zcw_A 84 L 84 (202)
T ss_dssp C
T ss_pred E
Confidence 4
No 305
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=72.67 E-value=16 Score=28.74 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=43.4
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeC----CC-----CcEEEEeCCeEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP----PN-----FAHSLRAEGSATLVV 132 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p----~~-----~~H~~~N~~~a~~l~ 132 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=.. .. ........++++++.
T Consensus 15 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~ 94 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAE 94 (207)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEE
T ss_pred eEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEE
Confidence 34566665442223346789999999999875 23554 477899987332 11 334455577888888
Q ss_pred EEE
Q 025000 133 FER 135 (259)
Q Consensus 133 v~~ 135 (259)
+.+
T Consensus 95 i~~ 97 (207)
T 2oz6_A 95 ISY 97 (207)
T ss_dssp EEH
T ss_pred ECH
Confidence 753
No 306
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=72.59 E-value=7.8 Score=28.87 Aligned_cols=64 Identities=6% Similarity=-0.076 Sum_probs=40.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEEe----CC-C-CceeEEeCCCc
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWM----AP-F-VPQWYAALGKT 244 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~~----~~-~-~~H~~~n~G~e 244 (259)
.+...++++|..+-. +-....+.|+|++|...+.. +|+. ..+.+||++=- .. . ....+.+..+.
T Consensus 34 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~ 109 (154)
T 2z69_A 34 SSDLVNLDKGAYVFR-QGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPS 109 (154)
T ss_dssp TCEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSE
T ss_pred hCcEEEecCCCEEec-CCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccce
Confidence 367888999998843 44556688999999998874 4554 46789998621 11 2 34556665443
No 307
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=71.82 E-value=3.1 Score=39.14 Aligned_cols=28 Identities=4% Similarity=-0.171 Sum_probs=24.7
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 216 GDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 216 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
......+++||++|||+|-.|...|..+
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCC
Confidence 4567889999999999999999999854
No 308
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=70.87 E-value=18 Score=29.01 Aligned_cols=62 Identities=10% Similarity=0.024 Sum_probs=43.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEE--eCCEEE---EccCCcEEEeCCCCceeEEeCCCc
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSWY---PVQAGDVLWMAPFVPQWYAALGKT 244 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~--~~g~~~---~v~~GD~i~~~~~~~H~~~n~G~e 244 (259)
.+...++++|..+- .+-....+.|+|++|...+. .+|+.. .+.+||++- .-.+..+.+..+.
T Consensus 22 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~ 88 (222)
T 1ft9_A 22 GFRSKIHAKGSLVC-TGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERT 88 (222)
T ss_dssp TCEEEEECTTCEEE-CTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCE
T ss_pred hCcEEEECCCCEEE-CCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccce
Confidence 46788899999884 34555668899999999875 467654 568999877 3345566665443
No 309
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=70.23 E-value=7.2 Score=35.02 Aligned_cols=26 Identities=8% Similarity=0.091 Sum_probs=22.8
Q ss_pred EEEEeCCcEEEeCCCCcEEEEeCCeE
Q 025000 103 SSKLMVDSYTYLPPNFAHSLRAEGSA 128 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~N~~~a 128 (259)
..+|++||.+|+|+|-.|...|.+++
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~s 282 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTT 282 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCe
Confidence 56899999999999999999995543
No 310
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=70.05 E-value=8.2 Score=29.03 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=38.3
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCE-EEEccCCcEEEe
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-WYPVQAGDVLWM 230 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~-~~~v~~GD~i~~ 230 (259)
.+...++++|..+-. +-....+.|+|++|...+..++. ...+.+||++--
T Consensus 49 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 49 EFQTVHCAPGDLIYH-AGESVDSLCFVVSGSLEVIQDDEVVAILGKGDVFGD 99 (160)
T ss_dssp TCEEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEETTEEEEEEETTCEEEC
T ss_pred hceeeeeCCCCEEEe-CCCCccEEEEEEeeEEEEEECCEEEEEecCCCEeCc
Confidence 456788899998743 44456688999999999887764 567899998764
No 311
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=70.03 E-value=6.1 Score=31.79 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=39.0
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCE-EEEccCCcEEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-WYPVQAGDVLW 229 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~-~~~v~~GD~i~ 229 (259)
..+....+.||..+= .+-....+.|+|++|...+..+|. ...+++||++-
T Consensus 96 ~~~~~~~~~~ge~I~-~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~G~~fG 146 (212)
T 3ukn_A 96 LIIKTSFCAPGEFLI-RQGDALQAIYFVCSGSMEVLKDNTVLAILGKGDLIG 146 (212)
T ss_dssp HHCEEEEECTTCEEE-CTTSBCCEEEEEEECCEEEESSSCEEEEECTTCEEE
T ss_pred HHhheEEeCCCCEEE-ECCCcccEEEEEEecEEEEEECCeEEEEecCCCCcC
Confidence 356778899999884 344456688999999999988774 56789999875
No 312
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=69.79 E-value=7.5 Score=30.90 Aligned_cols=68 Identities=22% Similarity=0.202 Sum_probs=43.8
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEE----e-CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTY----L-PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~----~-p~~~~H~~~N~~~a~~l~v~ 134 (259)
...+.||...-......+.+++|++|++++...+|+. ..+++||++= + ......+.+..+.++++.+.
T Consensus 96 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i~ 169 (198)
T 2ptm_A 96 FEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSLS 169 (198)
T ss_dssp EEEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEEE
T ss_pred ceeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEEe
Confidence 4556677644222334567999999999998634543 6899999762 1 12233455566778887774
No 313
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=69.22 E-value=6 Score=33.59 Aligned_cols=151 Identities=9% Similarity=0.079 Sum_probs=85.5
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEeCC---CCc--EEEEeCCeEEEEEEEEec-cc
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP---NFA--HSLRAEGSATLVVFERRY-AS 139 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~p~---~~~--H~~~N~~~a~~l~v~~~y-~p 139 (259)
...+++|...-......+.+++|++|.+.+.. +|+. ..+.+||++=--+ +.+ .+++..++++++.+.+.- ..
T Consensus 64 ~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-~g~~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~~~~ 142 (299)
T 3shr_A 64 PVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQT 142 (299)
T ss_dssp EEEECTTCEEECTTCBCCCEEEEEESCEEEEE-TTEEEEEECTTCEESCSGGGTTTBCCSEEEESSCEEEEEECHHHHHH
T ss_pred eEEECCCCEEEcCCCcCceEEEEEEEEEEEEE-CCEEEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCeEEEEEcHHHHHH
Confidence 45667775442223457889999999999998 7765 5899999864221 333 345557778887773221 10
Q ss_pred cCCCCcce----eeccCCCCCCcccCCceEEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEceEEEE
Q 025000 140 LENHITEQ----IVGSTDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR 214 (259)
Q Consensus 140 ~~g~~p~~----~v~~~~di~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~ 214 (259)
+-...|.. ...-...++.- +.|.+++.. ....+...++++|..+= .+-..-...|+|++|+..+.
T Consensus 143 i~~~~~~~~~~~~~~~l~~~~~f---------~~l~~~~l~~l~~~~~~~~~~~g~~I~-~~G~~~~~~yiI~~G~v~~~ 212 (299)
T 3shr_A 143 IMMRTGLIKHTEYMEFLKSVPTF---------QSLPEEILSKLADVLEETHYENGEYII-RQGARGDTFFIISKGKVNVT 212 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTSHHH---------HHSCHHHHHHHTTTCEEEEECTTCEEE-CTTCEECEEEEEEESEEEEE
T ss_pred HhhHhHHHHHHHHHHHHhhCHHh---------hhCCHHHHHHHHHhccEEEECCCCEEE-eCCCCCCEEEEEEeeEEEEE
Confidence 00000100 00001111000 001111111 12234677788998873 24444557899999999988
Q ss_pred eCC-------EEEEccCCcEE
Q 025000 215 LGD-------SWYPVQAGDVL 228 (259)
Q Consensus 215 ~~g-------~~~~v~~GD~i 228 (259)
..+ ....+.+||++
T Consensus 213 ~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 213 REDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp ECCSSSCCCEEEEEEETTCEE
T ss_pred EecCCCCcceEEEEcCCCCEe
Confidence 654 45678999986
No 314
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=68.94 E-value=6.5 Score=31.28 Aligned_cols=66 Identities=11% Similarity=0.052 Sum_probs=44.2
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe-CC-EEEEccCCcEEE-----eCCCCceeEEeCCCccE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-GD-SWYPVQAGDVLW-----MAPFVPQWYAALGKTRT 246 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~-~g-~~~~v~~GD~i~-----~~~~~~H~~~n~G~e~~ 246 (259)
.+....+.||..+= .+-....+.|+|++|...+.. +| ....+++||++= ...-.+..+.+.++..+
T Consensus 93 ~~~~~~~~~ge~I~-~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l 165 (198)
T 2ptm_A 93 LLEFEVFQPADYVI-QEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTL 165 (198)
T ss_dssp HCEEEEECTTCEEE-CTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEE
T ss_pred hccceeeCCCCEEE-ECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEE
Confidence 46788899999884 344455578999999999874 44 457889999752 12222355566554443
No 315
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=68.94 E-value=9.9 Score=27.93 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=38.6
Q ss_pred eEEEEEEceEEEEeCCEEEE--ccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 202 HGLLLLEGQGIYRLGDSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 202 h~~~il~G~g~~~~~g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
++-.+==|.|....||+..| |++||.+..+.|....++--| + +|+++++
T Consensus 37 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg-~--ey~i~re 87 (95)
T 3nx6_A 37 KGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEG-V--EYKVLRE 87 (95)
T ss_dssp EEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETT-E--EEEEEEG
T ss_pred ccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECC-E--EEEEEEH
Confidence 56667779999999998875 999999999999888887543 3 4666654
No 316
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=68.22 E-value=9.7 Score=28.07 Aligned_cols=68 Identities=10% Similarity=0.004 Sum_probs=42.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeC---CCC--cEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP---PNF--AHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p---~~~--~H~~~N~~~a~~l~v~ 134 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=.. .+. ....+..++++++.+.
T Consensus 30 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (149)
T 2pqq_A 30 EVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALG 107 (149)
T ss_dssp EEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEE
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEe
Confidence 45566765442223446789999999999875 23554 478899986321 122 2334456678887774
No 317
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=67.47 E-value=14 Score=29.44 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=35.1
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 228 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i 228 (259)
+...++++|..+- .+-....+.|+|++|...+.. +|+. .-+.+||++
T Consensus 26 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 26 LITQHVKKGTIIH-NGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp CEEEEECTTCEEE-EGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred CceEEeCCCCEEE-CCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 4678899999884 344455688999999998773 5654 456799996
No 318
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=67.37 E-value=13 Score=29.35 Aligned_cols=65 Identities=11% Similarity=0.103 Sum_probs=39.8
Q ss_pred ecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe--CCC--CcEEEEeCCeEEEEEEE
Q 025000 70 MQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL--PPN--FAHSLRAEGSATLVVFE 134 (259)
Q Consensus 70 l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~--p~~--~~H~~~N~~~a~~l~v~ 134 (259)
+++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=. -.+ ........++++++.+.
T Consensus 4 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i~ 77 (195)
T 3b02_A 4 FARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLE 77 (195)
T ss_dssp ECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEEC
T ss_pred cCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEEc
Confidence 44554332222345679999999999875 24554 37889998733 112 23345557788888874
No 319
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=67.27 E-value=17 Score=28.74 Aligned_cols=68 Identities=12% Similarity=-0.045 Sum_probs=44.1
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~ 134 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=. ...........++++++.+.
T Consensus 24 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~ 101 (216)
T 4ev0_A 24 RRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLALF 101 (216)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEEE
T ss_pred EEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEEc
Confidence 44566665442223446899999999999875 24553 47899998732 12234455567788888874
No 320
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=67.23 E-value=15 Score=29.88 Aligned_cols=70 Identities=10% Similarity=0.155 Sum_probs=45.2
Q ss_pred EEEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEE----eCCC--CcEEEEeCCeEEEEEEE
Q 025000 66 YLANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY----LPPN--FAHSLRAEGSATLVVFE 134 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~----~p~~--~~H~~~N~~~a~~l~v~ 134 (259)
...++++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++= +... ........++++++.+.
T Consensus 44 ~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~i~ 123 (232)
T 1zyb_A 44 HFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCIS 123 (232)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEE
T ss_pred EEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEEEEEE
Confidence 355666775442223456789999999999874 23433 3778999873 2222 34556667788888885
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
+
T Consensus 124 ~ 124 (232)
T 1zyb_A 124 K 124 (232)
T ss_dssp H
T ss_pred H
Confidence 4
No 321
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=67.21 E-value=16 Score=29.05 Aligned_cols=69 Identities=13% Similarity=0.119 Sum_probs=43.2
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe-----CCCC--cEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNF--AHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~-----p~~~--~H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++-| -.+. .......++++++.+.
T Consensus 28 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (220)
T 3dv8_A 28 TQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWIIP 107 (220)
T ss_dssp EEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEEEE
T ss_pred eEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEEEE
Confidence 34556665432222346789999999999875 24554 46779999622 1233 3345557788888874
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
+
T Consensus 108 ~ 108 (220)
T 3dv8_A 108 A 108 (220)
T ss_dssp H
T ss_pred H
Confidence 3
No 322
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=67.01 E-value=17 Score=30.22 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=45.1
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeC----CC--CcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP----PN--FAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p----~~--~~H~~~N~~~a~~l~v~~ 135 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++=.. .. .....+..++++++.+.+
T Consensus 71 ~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i~~ 150 (260)
T 3kcc_A 71 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 150 (260)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEEcH
Confidence 45566776542223456889999999999875 24553 478999988422 22 234455577888888743
No 323
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=66.79 E-value=13 Score=29.31 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=35.2
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW 229 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~ 229 (259)
+...++++|..+- .+-....+.|+|++|...+.. +|+. .-+.+||++-
T Consensus 13 ~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 13 CHRRRYTAKSTII-YAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp SEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred cceEEECCCCEEE-cCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 5677889999883 344455688999999998763 4554 4567999873
No 324
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=66.61 E-value=11 Score=30.30 Aligned_cols=66 Identities=11% Similarity=0.064 Sum_probs=43.2
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEEE---EccCCcEEEe-----CCCCceeEEeCCCccE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLWM-----APFVPQWYAALGKTRT 246 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~~---~v~~GD~i~~-----~~~~~H~~~n~G~e~~ 246 (259)
.+...++++|..+- .+-....+.|+|++|...+.. +|+.. .+.+||++-- ..-.+..+.+..+..+
T Consensus 28 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v 104 (227)
T 3d0s_A 28 QLQPVDFPRGHTVF-AEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRA 104 (227)
T ss_dssp TSCEEEECTTCEEE-CTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEE
T ss_pred hCeEEEeCCCCEEE-cCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEE
Confidence 34678899999884 344455688999999998764 56554 6789998631 1223455666544333
No 325
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=66.49 E-value=13 Score=29.73 Aligned_cols=69 Identities=7% Similarity=0.192 Sum_probs=44.5
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEE----eCCC--CcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY----LPPN--FAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~----~p~~--~~H~~~N~~~a~~l~v~~ 135 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++= +..+ ........++++++.+.+
T Consensus 24 ~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i~~ 103 (213)
T 1o5l_A 24 VIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSIPK 103 (213)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEEEH
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEEeH
Confidence 44566765442223446789999999999875 24554 3688999873 2222 344555677888888853
No 326
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=66.44 E-value=3.6 Score=37.65 Aligned_cols=28 Identities=11% Similarity=-0.077 Sum_probs=24.4
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 216 GDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 216 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..-...++|||.+|+|+|..|+..|..+
T Consensus 215 ~~~ev~l~pGEtLfIPsGWwH~V~nled 242 (371)
T 3k3o_A 215 KCYKCSVKQGQTLFIPTGWIHAVLTPVD 242 (371)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCcEEEeCCCCeEEEecCCC
Confidence 4567899999999999999999999743
No 327
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=66.13 E-value=24 Score=28.45 Aligned_cols=69 Identities=12% Similarity=0.071 Sum_probs=44.4
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~~ 135 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=. ...........++++++.+.+
T Consensus 36 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~ 114 (237)
T 3fx3_A 36 WRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHIPS 114 (237)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSEEEEEEEH
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCceEEEEEcH
Confidence 44566665442223456789999999999876 24554 46789998732 112344555577888888743
No 328
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=66.01 E-value=11 Score=28.68 Aligned_cols=49 Identities=4% Similarity=-0.115 Sum_probs=35.5
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe--CCEEE---EccCCcEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL--GDSWY---PVQAGDVL 228 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~--~g~~~---~v~~GD~i 228 (259)
..+...++++|..+= .+-....+.|+|++|...+.. +|+.. .+.+||++
T Consensus 59 ~~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 59 DAMFEKLVKEGEHVI-DQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp HHCEEEEECTTCEEE-CTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEE
T ss_pred HhcceeEeCCCCEEE-eCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEe
Confidence 346678899999884 345556688999999998854 45444 46789965
No 329
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=65.83 E-value=9.1 Score=30.01 Aligned_cols=48 Identities=8% Similarity=-0.103 Sum_probs=35.9
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEEE---EccCCcEEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLW 229 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~~---~v~~GD~i~ 229 (259)
++..++++|..+- .+-....+.|+|++|...+.. +|+.. -+.+||++-
T Consensus 30 ~~~~~~~~g~~l~-~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 30 FQLKKVRKKETLL-KTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp CEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred CEEEEEcCCCEEE-CCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 4678889999884 344555688999999998763 66554 468999985
No 330
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=65.81 E-value=21 Score=28.49 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=44.4
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe----CCCC--cEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL----PPNF--AHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~----p~~~--~H~~~N~~~a~~l~v~~ 135 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++=. ..+. .......++++++.+.+
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 115 (230)
T 3iwz_A 36 RRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISY 115 (230)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcEEEEEEeH
Confidence 44566665442223456889999999999875 24554 46889998842 2222 33455577888888743
No 331
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=65.63 E-value=3.8 Score=37.77 Aligned_cols=28 Identities=11% Similarity=-0.153 Sum_probs=24.7
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 216 GDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 216 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..-...+++||.+|||+|..|+..|..+
T Consensus 242 ~~~ev~l~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 242 KCYKCIVKQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCcEEeeCCCceEEEecCCC
Confidence 4567899999999999999999999844
No 332
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=65.53 E-value=13 Score=27.32 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=36.9
Q ss_pred eEEEEEEceEEEEeCCEEEE--ccCCcEEEeCC-CCceeEEeCCCccEEEEEEee
Q 025000 202 HGLLLLEGQGIYRLGDSWYP--VQAGDVLWMAP-FVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 202 h~~~il~G~g~~~~~g~~~~--v~~GD~i~~~~-~~~H~~~n~G~e~~~fi~~k~ 253 (259)
.+-.+==|.|....||+..+ |++||.+..+. |....++--| + +|+++++
T Consensus 37 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dg-e--ey~i~re 88 (97)
T 1pcq_O 37 RGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDN-E--EVLIMSE 88 (97)
T ss_dssp EEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETT-E--EEEEEEG
T ss_pred ccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECC-E--EEEEEEh
Confidence 55666668888777888765 99999999999 8878887544 3 4666654
No 333
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=65.49 E-value=10 Score=30.40 Aligned_cols=68 Identities=13% Similarity=0.081 Sum_probs=44.4
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEEE---EccCCcEEEeC----C--CCceeEEeCCCcc
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLWMA----P--FVPQWYAALGKTR 245 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~~---~v~~GD~i~~~----~--~~~H~~~n~G~e~ 245 (259)
.-.++..++++|..+-. +-....+.|+|++|...+.. +|+.. .+.+||++-.. . -....+.+..+..
T Consensus 19 ~~~~~~~~~~~g~~i~~-~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~ 97 (213)
T 1o5l_A 19 LPCGKVIVFRKGEIVKH-QDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSK 97 (213)
T ss_dssp GGGSEEEEECTTCEEEC-TTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEE
T ss_pred hcccEEEEECCCCEEEc-CCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceE
Confidence 34567888999998843 44555688999999998763 56554 57899987321 1 2345566654433
Q ss_pred E
Q 025000 246 T 246 (259)
Q Consensus 246 ~ 246 (259)
+
T Consensus 98 v 98 (213)
T 1o5l_A 98 I 98 (213)
T ss_dssp E
T ss_pred E
Confidence 3
No 334
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=64.81 E-value=3.8 Score=38.95 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=21.6
Q ss_pred EEccCCcEEEeCCCCceeEEeCCC
Q 025000 220 YPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 220 ~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..=+|||+|++.||+-||..|.|-
T Consensus 315 ~iQkPGdfVit~PgtyH~Vqs~Gf 338 (510)
T 4ask_A 315 FVQRPGDLVWINAGTVHWVQATGW 338 (510)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEECCCceEEEEecCe
Confidence 445799999999999999999996
No 335
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=64.45 E-value=5.7 Score=37.24 Aligned_cols=28 Identities=11% Similarity=-0.077 Sum_probs=24.6
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 216 GDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 216 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..-...++|||.+|+|+|-.|+..|..+
T Consensus 299 ~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 299 KCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred ceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 3457899999999999999999999944
No 336
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=64.37 E-value=9.8 Score=31.96 Aligned_cols=48 Identities=10% Similarity=0.103 Sum_probs=37.5
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCC-EEEEccCCcEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-SWYPVQAGDVL 228 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g-~~~~v~~GD~i 228 (259)
.+...++++|..+= .+-....+.|+|++|+..+..+| ....+.+||++
T Consensus 61 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~g~~~~~l~~G~~f 109 (291)
T 2qcs_B 61 AMFPVSFIAGETVI-QQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSF 109 (291)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCEEEEEEECCEEEEETTEEEEEECTTCEE
T ss_pred hccEEEECCCCEEE-eCCCCCceEEEEeeeEEEEEECCeEEEEcCCCCcc
Confidence 45788899999883 34455568899999999998887 44678899986
No 337
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=64.05 E-value=17 Score=27.45 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=42.3
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEEeCCcEEEe---CCCCcE--EEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYL---PPNFAH--SLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v-~~ge~---~~L~~Gd~i~~---p~~~~H--~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=. -.+.++ .....++++++.+.
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~ 139 (161)
T 3idb_B 63 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLD 139 (161)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEEE
T ss_pred eeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEEe
Confidence 45666775443223456899999999999865 24544 36888996531 113333 34456677777764
No 338
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=63.74 E-value=23 Score=33.32 Aligned_cols=51 Identities=10% Similarity=-0.042 Sum_probs=43.2
Q ss_pred ccceEEEEEEceEEEEeCCEEEEccCCcEEEeCCCCceeEEeCCCccEEEEEE
Q 025000 199 YNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 251 (259)
Q Consensus 199 ~~eh~~~il~G~g~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 251 (259)
.-++.+++-+|.+.+.-.=-+.+|++||++.|+-|+.+.+.-.+ +.+-++.
T Consensus 177 DGD~Livpq~G~l~i~TEfG~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp SEEEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred CCCEEEEEEeCCEEEEEecccEEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 34467899999999999999999999999999999999998776 6654443
No 339
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=63.55 E-value=28 Score=28.44 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=43.7
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEE--eCCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY--LPPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~--~p~~~~H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++= +...........++++++.+.
T Consensus 34 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~~~~~v~~i~ 108 (250)
T 3e6c_C 34 IRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFS 108 (250)
T ss_dssp EEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSEEEEEEC
T ss_pred EEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEcccEEEEEEc
Confidence 44556665442223446789999999999875 24555 3678999874 222244455557788888874
No 340
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=63.34 E-value=9 Score=30.49 Aligned_cols=64 Identities=13% Similarity=0.000 Sum_probs=42.7
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEEe-----CCCCceeEEeCCCcc
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWM-----APFVPQWYAALGKTR 245 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~~-----~~~~~H~~~n~G~e~ 245 (259)
++..++++|..+-. +-....+.|+|++|...+.. +|+. ..+.+||++-. ..-.+..+.+..+..
T Consensus 22 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~ 96 (216)
T 4ev0_A 22 FQRRLYPQGKPIFY-QGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTE 96 (216)
T ss_dssp CEEEEECTTCEEEC-TTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEE
T ss_pred heEEEeCCCCEEEe-CCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEE
Confidence 56788899998843 45556689999999998773 5653 56789998632 112235555554433
No 341
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=63.02 E-value=4.3 Score=38.94 Aligned_cols=24 Identities=25% Similarity=0.692 Sum_probs=21.7
Q ss_pred EEccCCcEEEeCCCCceeEEeCCC
Q 025000 220 YPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 220 ~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..=+|||+|++.||+-||..|.|-
T Consensus 340 ~vQkpGd~Vi~~PgayH~v~n~G~ 363 (531)
T 3avr_A 340 FIQRPGDLVWINAGTVHWVQAIGW 363 (531)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEECCCceEEEEecce
Confidence 445899999999999999999996
No 342
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=62.97 E-value=20 Score=26.42 Aligned_cols=49 Identities=20% Similarity=0.336 Sum_probs=36.8
Q ss_pred eEEEEEEceEEEEeCC-EEEE--ccCCcEEEeCCCCceeEEeCCCccEEEEEEee
Q 025000 202 HGLLLLEGQGIYRLGD-SWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 253 (259)
Q Consensus 202 h~~~il~G~g~~~~~g-~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k~ 253 (259)
.+-.+==|.|....|| +..| |+.||.+..+.|....++--| + +|+++++
T Consensus 39 ~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dg-e--ey~i~re 90 (99)
T 1p3h_A 39 EGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNG-E--EYLILSA 90 (99)
T ss_dssp EEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETT-E--EEEEEEG
T ss_pred eEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECC-E--EEEEEEh
Confidence 5556667888887788 7764 999999999999888887543 3 5666654
No 343
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=62.81 E-value=5.6 Score=32.27 Aligned_cols=66 Identities=14% Similarity=0.042 Sum_probs=42.9
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCE---EEEccCCcEEEe-----CCCCceeEEeCCCccE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS---WYPVQAGDVLWM-----APFVPQWYAALGKTRT 246 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~---~~~v~~GD~i~~-----~~~~~H~~~n~G~e~~ 246 (259)
.+...++++|..+- .+-....+.|+|++|...+.. +|+ ...+.+||++-. ..-.+..+.+..+..+
T Consensus 32 ~~~~~~~~~g~~i~-~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v 108 (232)
T 2gau_A 32 EIQPFPCKKASTVF-SEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKV 108 (232)
T ss_dssp HCEEEEECTTCEEE-CTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEE
T ss_pred hCeEEEECCCCEEE-eCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEE
Confidence 46788899999884 344555688999999998873 454 357789998621 2223456666544333
No 344
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=61.94 E-value=9.8 Score=30.58 Aligned_cols=49 Identities=8% Similarity=-0.050 Sum_probs=36.5
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW 229 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~ 229 (259)
.+...++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++-
T Consensus 33 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 33 HSHRRRYPTRTDVF-RPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp TSEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred hCeEEEeCCCCEEE-CCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 35688899999884 344556688999999998774 5554 4578999874
No 345
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=61.35 E-value=17 Score=29.34 Aligned_cols=66 Identities=15% Similarity=0.180 Sum_probs=43.0
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCc--EEEEeCCcEEE----eCCCCcE--EEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV--SSKLMVDSYTY----LPPNFAH--SLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge--~~~L~~Gd~i~----~p~~~~H--~~~N~~~a~~l~v~ 134 (259)
...+.+|...-......+.+++|++|++++.. .++ ...+.+||++= +. +.+. +.+..+++.++.+.
T Consensus 150 ~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~-~~~~~~~~l~~g~~fGe~~~~~-~~~~~~~v~a~~~~~~~~i~ 223 (246)
T 3of1_A 150 TKIYQPGETIIREGDQGENFYLIEYGAVDVSK-KGQGVINKLKDHDYFGEVALLN-DLPRQATVTATKRTKVATLG 223 (246)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEEE-TTTEEEEEEETTCEECHHHHHH-TCBCSSEEEESSCEEEEEEE
T ss_pred eEEeCCCCEEEeCCCcCCEEEEEEecEEEEEE-cCCceEEEcCCCCcccHHHHhC-CCCcccEEEECCCEEEEEEe
Confidence 34556765442223456899999999999998 554 47899999772 11 2332 34446677777764
No 346
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=61.32 E-value=25 Score=27.99 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=43.3
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEE--eCCEE---EEccCCcEEEeCCCCceeEEeCCCcc
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSW---YPVQAGDVLWMAPFVPQWYAALGKTR 245 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~--~~g~~---~~v~~GD~i~~~~~~~H~~~n~G~e~ 245 (259)
.+...++++|..+- .+-....+.|+|++|...+. .+|+. ..+.+||++-. -.+..+.+..+..
T Consensus 26 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~~~~ 93 (220)
T 2fmy_A 26 EFREQRYSKKAILY-TPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--HTRAFIQAMEDTT 93 (220)
T ss_dssp GSEEEEECTTCEEE-CTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--CSSSEEEESSSEE
T ss_pred hhheeEeCCCCEEE-CCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--ccceEEEEcCcEE
Confidence 36688899999884 34445568899999999874 35654 46689998765 3345666654433
No 347
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=61.14 E-value=5 Score=38.01 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=24.3
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 216 GDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 216 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..-...++|||.+|||+|-.|+..|..+
T Consensus 334 ~~~~~~l~pGe~lfIPsGWwH~V~nled 361 (488)
T 3kv5_D 334 KCYKCVVKQGHTLFVPTGWIHAVLTSQD 361 (488)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEeeCCCCEEEeCCCceEEeeCCCC
Confidence 3457889999999999999999999843
No 348
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=60.59 E-value=16 Score=29.71 Aligned_cols=65 Identities=14% Similarity=0.114 Sum_probs=42.9
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEEe----CCC--CceeEEeCCCccE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWM----APF--VPQWYAALGKTRT 246 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~~----~~~--~~H~~~n~G~e~~ 246 (259)
++..++++|..+-. +-....+.|+|++|...+.. +|+. ..+.+||++-. ... .+..+.+..+..+
T Consensus 43 ~~~~~~~~ge~i~~-~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIK-SGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHT 119 (232)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEE
T ss_pred cEEEEECCCCEEEC-CCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEE
Confidence 67888999998843 44455688999999998764 4543 46789998632 121 3556666644433
No 349
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=60.43 E-value=17 Score=30.20 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=44.4
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEEE---eCCE---EEEccCCcEEEeC----CC--CceeEEeCCCccE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR---LGDS---WYPVQAGDVLWMA----PF--VPQWYAALGKTRT 246 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~---~~g~---~~~v~~GD~i~~~----~~--~~H~~~n~G~e~~ 246 (259)
-.++..++++|..+- .+-....+.|+|++|...+. .+|+ ...+.+||++--. .. .+..+.+..+..+
T Consensus 67 ~~~~~~~~~~ge~i~-~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l 145 (260)
T 3kcc_A 67 SHCHIHKYPSKSTLI-HQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEV 145 (260)
T ss_dssp TTSEEEEECTTCEEE-CTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEE
T ss_pred hhCEEEEECCCCEEE-CCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEE
Confidence 345688899999884 34445668899999999887 3554 4557899987322 11 2345566544333
Q ss_pred E
Q 025000 247 R 247 (259)
Q Consensus 247 ~ 247 (259)
-
T Consensus 146 ~ 146 (260)
T 3kcc_A 146 A 146 (260)
T ss_dssp E
T ss_pred E
Confidence 3
No 350
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=59.98 E-value=38 Score=27.08 Aligned_cols=69 Identities=13% Similarity=0.107 Sum_probs=43.4
Q ss_pred EEEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeCC---CCc--EEEEeCCeEEEEEEE
Q 025000 66 YLANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP---NFA--HSLRAEGSATLVVFE 134 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p~---~~~--H~~~N~~~a~~l~v~ 134 (259)
....+++|...-......+.+++|++|.+.+.. .+|++ ..+.+||++=..+ +.+ ......++++++.+.
T Consensus 30 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~ 108 (231)
T 3e97_A 30 TERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLMLH 108 (231)
T ss_dssp EEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEEEEC
T ss_pred EEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEEEEe
Confidence 355677776553333456789999999999875 24443 4789999874221 233 334446778888773
No 351
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=59.98 E-value=9.9 Score=30.00 Aligned_cols=45 Identities=16% Similarity=-0.012 Sum_probs=31.4
Q ss_pred EEecCCcccCcceeeccceEEEEEEceEEEEe---CCEEE---EccCCcEEE
Q 025000 184 MDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLW 229 (259)
Q Consensus 184 ~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~~---~v~~GD~i~ 229 (259)
.++++|..+- .+-....+.|+|++|...+.. +|+.. .+.+||++=
T Consensus 2 ~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 2 KRFARKETIY-LRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp EEECTTCEEE-CTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred eEcCCCCEEE-CCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 3567787763 244445578999999998764 56544 678999863
No 352
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=59.33 E-value=18 Score=26.28 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=24.7
Q ss_pred EEEeCCcEEEeCCCCcEEEEeCCeEEEEEE
Q 025000 104 SKLMVDSYTYLPPNFAHSLRAEGSATLVVF 133 (259)
Q Consensus 104 ~~L~~Gd~i~~p~~~~H~~~N~~~a~~l~v 133 (259)
-.|++||.+.+|++.+-..++.....++.+
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A~~~le~v~F 37 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKAASDLNMVGI 37 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEESSSEEEEEE
T ss_pred ceecCCcEEEECCCCceeEEecCCeEEEEE
Confidence 479999999999999999998555555555
No 353
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=58.62 E-value=13 Score=30.08 Aligned_cols=47 Identities=13% Similarity=0.029 Sum_probs=35.3
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 228 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i 228 (259)
+...++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 34 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 34 AVWRSYDRGETLF-LQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp CEEEEECTTCEEE-CTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred CEEEEECCCCEEE-cCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5678889999884 344455688999999998775 5544 456899987
No 354
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=58.18 E-value=12 Score=29.63 Aligned_cols=49 Identities=18% Similarity=0.051 Sum_probs=35.7
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCE---EEEccCCcEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS---WYPVQAGDVL 228 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~---~~~v~~GD~i 228 (259)
..+...++++|..+-. +-......|+|++|...+.. +|+ ...+.+||++
T Consensus 60 ~~~~~~~~~~ge~i~~-~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 60 SYMQCYAAPRDCQLLT-EGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp TTCEEEEECTTCEEEC-TTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred HhcEEEEeCCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 3467888999998843 44455688999999997764 444 3467899985
No 355
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=58.04 E-value=6.3 Score=36.38 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=24.4
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEeCCC
Q 025000 216 GDSWYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 216 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
..-...+++||.+|||+|-.|+..|..+
T Consensus 243 ~~~~v~l~pGe~lfIPsGW~H~V~nled 270 (397)
T 3kv9_A 243 KCYKCVVKQGHTLFVPTGWIHAVLTSQD 270 (397)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCCEEEeCCCCeEEccCCcC
Confidence 4567889999999999999999999843
No 356
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=57.57 E-value=24 Score=27.44 Aligned_cols=68 Identities=12% Similarity=0.101 Sum_probs=44.4
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcEE---EEeCCcEEE-eC---CCCc--EEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVSS---KLMVDSYTY-LP---PNFA--HSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~~---~L~~Gd~i~-~p---~~~~--H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. .+|++. .+.+||++= +. .+.+ ......++++++.+.
T Consensus 32 ~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i~ 110 (194)
T 3dn7_A 32 LKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSIT 110 (194)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEEE
T ss_pred EEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEEe
Confidence 44566665442223456889999999999875 256543 578999985 31 2333 445557788888874
No 357
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=57.18 E-value=9 Score=34.35 Aligned_cols=153 Identities=12% Similarity=0.039 Sum_probs=85.9
Q ss_pred EEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEEeCCcEEEeC---CCCc--EEEEeCCeEEEEEEEEec-
Q 025000 65 MYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLP---PNFA--HSLRAEGSATLVVFERRY- 137 (259)
Q Consensus 65 ~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~-~~L~~Gd~i~~p---~~~~--H~~~N~~~a~~l~v~~~y- 137 (259)
+....+++|...-......+.+++|++|++.+.. +|+. ..+.+||++=-- .+.+ .+.+..++++++.+.+.-
T Consensus 153 ~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~-~~~~v~~l~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~~~~f 231 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV-NGEWVTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSY 231 (381)
T ss_dssp CEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE-TTEEEEEEESSCCBCGGGGTSCCBCSSEEEESSSCEEEEEEHHHH
T ss_pred ceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE-CCeEeeeCCCCCEEEchHHhcCCCcceEEEECCCEEEEEEchHHH
Confidence 3467778886553334567899999999999998 7765 589999986311 1333 345556677777764321
Q ss_pred cccCCCCcce----eeccCCCCCCcccCCceEEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEceEE
Q 025000 138 ASLENHITEQ----IVGSTDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGI 212 (259)
Q Consensus 138 ~p~~g~~p~~----~v~~~~di~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~ 212 (259)
..+-...|.. +..-...++... . |.+.+.. ....+....+++|..+= .+-..-...|+|++|+..
T Consensus 232 ~~ll~~~~~~~~~~~~~~L~~v~~f~--~-------Ls~~el~~l~~~~~~~~~~~ge~I~-~eGd~~~~~yiI~~G~v~ 301 (381)
T 4din_B 232 RRILMGSTLRKRKMYEEFLSKVSILE--S-------LEKWERLTVADALEPVQFEDGEKIV-VQGEPGDDFYIITEGTAS 301 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSTTT--T-------CCTTHHHHHHTTCBCCCBCSSCBSS-CTTSBCCEEEEEEESCEE
T ss_pred HHhhhhhhHHHHHHHHHHhhhhHHHH--h-------ccHHHHHHHHHhhhhccCCCCCEEE-eCCCcCCEEEEEEeCEEE
Confidence 1100000100 000000010000 0 0011111 11234456678888874 344555688999999999
Q ss_pred EEeCC-------EEEEccCCcEE
Q 025000 213 YRLGD-------SWYPVQAGDVL 228 (259)
Q Consensus 213 ~~~~g-------~~~~v~~GD~i 228 (259)
+.... ....+++||++
T Consensus 302 v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 302 VLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp EECCSSSSSCCCEEEEECTTCEE
T ss_pred EEEecCCCCceEEEEEeCCCCEe
Confidence 88642 35678999986
No 358
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=55.16 E-value=16 Score=34.25 Aligned_cols=27 Identities=7% Similarity=0.228 Sum_probs=23.3
Q ss_pred EEEEeCCcEEEeCCCCcEEEEeCCeEE
Q 025000 103 SSKLMVDSYTYLPPNFAHSLRAEGSAT 129 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~N~~~a~ 129 (259)
..++++||.+|+|+|=-|...|.+..-
T Consensus 302 ~v~l~pGetlfIPsGWwH~V~nledsI 328 (447)
T 3kv4_A 302 KCSVKQGQTLFIPTGWIHAVLTPVDCL 328 (447)
T ss_dssp EEEEETTCEEEECTTCEEEEEESSCEE
T ss_pred EEEECCCcEEecCCCCeEEEecCCCEE
Confidence 568999999999999999999955443
No 359
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=54.79 E-value=12 Score=34.24 Aligned_cols=25 Identities=8% Similarity=0.235 Sum_probs=22.1
Q ss_pred cEEEEeCCcEEEeCCCCcEEEEeCC
Q 025000 102 VSSKLMVDSYTYLPPNFAHSLRAEG 126 (259)
Q Consensus 102 e~~~L~~Gd~i~~p~~~~H~~~N~~ 126 (259)
...++++||.+|+|+|=-|...|.+
T Consensus 217 ~ev~l~pGEtLfIPsGWwH~V~nle 241 (371)
T 3k3o_A 217 YKCSVKQGQTLFIPTGWIHAVLTPV 241 (371)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEE
T ss_pred EEEEECCCcEEEeCCCCeEEEecCC
Confidence 4568999999999999999999944
No 360
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=53.31 E-value=14 Score=34.02 Aligned_cols=26 Identities=4% Similarity=0.064 Sum_probs=22.6
Q ss_pred cEEEEeCCcEEEeCCCCcEEEEeCCe
Q 025000 102 VSSKLMVDSYTYLPPNFAHSLRAEGS 127 (259)
Q Consensus 102 e~~~L~~Gd~i~~p~~~~H~~~N~~~ 127 (259)
...++++||.+|+|+|--|...|.+.
T Consensus 244 ~ev~l~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 244 YKCIVKQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEEECCCcEEeeCCCceEEEecCCC
Confidence 35789999999999999999999443
No 361
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=53.15 E-value=24 Score=29.74 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=42.0
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCC----c---EEEEeCCcEEEeCC---CCc--EEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASG----V---SSKLMVDSYTYLPP---NFA--HSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~g----e---~~~L~~Gd~i~~p~---~~~--H~~~N~~~a~~l~v~ 134 (259)
...+.+|...-......+.+++|++|++.+.. .+ + ...+++||++=--+ +.+ .+++..++++++.+.
T Consensus 182 ~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~-~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~ 260 (299)
T 3shr_A 182 ETHYENGEYIIRQGARGDTFFIISKGKVNVTR-EDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVID 260 (299)
T ss_dssp EEEECTTCEEECTTCEECEEEEEEESEEEEEE-CCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEEE
T ss_pred EEEECCCCEEEeCCCCCCEEEEEEeeEEEEEE-ecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEEe
Confidence 44566765442223456889999999999987 33 2 35789999873211 222 233346677777774
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
+
T Consensus 261 ~ 261 (299)
T 3shr_A 261 R 261 (299)
T ss_dssp H
T ss_pred H
Confidence 3
No 362
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=52.57 E-value=26 Score=31.67 Aligned_cols=67 Identities=7% Similarity=0.012 Sum_probs=43.5
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCc--EEEEeCCcEEEeC---CCCcE--EEEeCC-eEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV--SSKLMVDSYTYLP---PNFAH--SLRAEG-SATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge--~~~L~~Gd~i~~p---~~~~H--~~~N~~-~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|++.+.. .++ ...+.+||++=-- .+.++ +.+..+ +++++.+.
T Consensus 363 ~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~~~~~i~ 437 (469)
T 1o7f_A 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI-YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVD 437 (469)
T ss_dssp EEECSTTCEEECTTSCCCEEEEEEESEEEEEE-TTTEEEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEE
T ss_pred eeEecCCCEEEeCCCcCCeEEEEEEeEEEEEE-cCCeeEEEecCCCEEEEehhhcCCCceEEEEEecCCEEEEEEc
Confidence 34677776543333456889999999999998 654 4689999976211 12232 344444 57877774
No 363
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=52.21 E-value=17 Score=34.08 Aligned_cols=27 Identities=11% Similarity=0.162 Sum_probs=23.2
Q ss_pred cEEEEeCCcEEEeCCCCcEEEEeCCeE
Q 025000 102 VSSKLMVDSYTYLPPNFAHSLRAEGSA 128 (259)
Q Consensus 102 e~~~L~~Gd~i~~p~~~~H~~~N~~~a 128 (259)
...++++||.+|+|+|=-|...|.+.+
T Consensus 266 ~~v~l~pGE~LfIPsGWwH~V~nleds 292 (451)
T 2yu1_A 266 QRIELKQGYTFVIPSGWIHAVYTPTDT 292 (451)
T ss_dssp EEEEECTTCEEEECTTCEEEEECSSCE
T ss_pred eEEEECCCcEEEeCCCceEEEecCCCe
Confidence 457899999999999999999995443
No 364
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=51.76 E-value=20 Score=29.37 Aligned_cols=47 Identities=11% Similarity=0.024 Sum_probs=34.8
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 228 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i 228 (259)
++..++++|..+- .+-....+.|+|++|...+.. +|+. .-+.+||++
T Consensus 43 ~~~~~~~~ge~i~-~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 43 PVVETFERNKTIF-FPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred heeEEECCCCEEE-cCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 5577889999884 344455688999999998764 4544 457899986
No 365
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=51.41 E-value=14 Score=35.02 Aligned_cols=25 Identities=8% Similarity=0.254 Sum_probs=22.2
Q ss_pred EEEEeCCcEEEeCCCCcEEEEeCCe
Q 025000 103 SSKLMVDSYTYLPPNFAHSLRAEGS 127 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~N~~~ 127 (259)
..+|++||.+|+|+|=-|...|.+.
T Consensus 337 ~~~l~pGe~lfIPsGWwH~V~nled 361 (488)
T 3kv5_D 337 KCVVKQGHTLFVPTGWIHAVLTSQD 361 (488)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEeeCCCCEEEeCCCceEEeeCCCC
Confidence 5689999999999999999999443
No 366
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=51.18 E-value=35 Score=27.84 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=42.2
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEE---eCCCCceeEEeCCC
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW---MAPFVPQWYAALGK 243 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~---~~~~~~H~~~n~G~ 243 (259)
-.++..++++|..+-. +-....+.|+|++|...+.. +|+. .-+.+||++- ... .+..+.+..+
T Consensus 30 ~~~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~-~~~~~~A~~~ 101 (250)
T 3e6c_C 30 QMGLIRDFAKGSAVIM-PGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTG-NNIYATAMEP 101 (250)
T ss_dssp GGSEEEEECTTCEEEC-TTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCS-CCEEEEESSS
T ss_pred hhCeEEEECCCCEEEC-CCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCC-CceEEEEccc
Confidence 3467888999998843 44455688999999997763 4554 4577999873 222 4455555543
No 367
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=50.80 E-value=31 Score=29.51 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=43.0
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCc--EEEEeCCcEEE----e-CCCCcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGV--SSKLMVDSYTY----L-PPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge--~~~L~~Gd~i~----~-p~~~~H~~~N~~~a~~l~v~~ 135 (259)
...+++|...-......+.+++|++|.+++.. .+|+ ...+.+||++= + ..-..++.+..++++++.+.+
T Consensus 38 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i~~ 115 (333)
T 4ava_A 38 PLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGR 115 (333)
T ss_dssp EEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEECH
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEEcH
Confidence 44566665432222346779999999999876 1232 45889999872 1 122334555677888887743
No 368
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=50.59 E-value=2.2 Score=31.63 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=32.5
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe--CCEE---E--EccCCcEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL--GDSW---Y--PVQAGDVL 228 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~--~g~~---~--~v~~GD~i 228 (259)
++..++++|..+= .+-....+.|+|++|+..+.. +|+. . .+.+||++
T Consensus 29 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 29 LKPCLFTEKSYLV-REGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CBCCCBCTTEEEE-CTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBS
T ss_pred heEEEeCCCCEEE-eCCCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEe
Confidence 4566777887763 234445578999999999764 3544 2 77899975
No 369
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=50.48 E-value=65 Score=29.05 Aligned_cols=156 Identities=11% Similarity=0.022 Sum_probs=83.0
Q ss_pred EEEEecCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEEEe
Q 025000 66 YLANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFERR 136 (259)
Q Consensus 66 ~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v-~~ge~---~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~~~ 136 (259)
....+.+|...-.....++.+++|++|.+.+.. .+|+. ..+.+||++=- ..-...+++..++++++.+.+.
T Consensus 169 ~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~~l~~i~r~ 248 (416)
T 3tnp_B 169 FEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPGALWGLDRV 248 (416)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSEEEEEEEHH
T ss_pred EEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCeEEEEEeeh
Confidence 456677776543333457899999999999876 23443 46899996631 1222345556777888777432
Q ss_pred c-cccCCCCcceeeccCCCC-CCcccCCceEEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEceEEE
Q 025000 137 Y-ASLENHITEQIVGSTDKQ-PLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY 213 (259)
Q Consensus 137 y-~p~~g~~p~~~v~~~~di-~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~ 213 (259)
- ..+-...|..-......+ ...+. .+.|.+.+.. ....+....+++|..+= .+-..-.+.|+|++|+..+
T Consensus 249 ~f~~ll~~~~~~~~~~~~~~L~~v~l------f~~Ls~~el~~L~~~l~~~~~~~Ge~I~-~eGd~~~~~yiI~sG~v~v 321 (416)
T 3tnp_B 249 TFRRIIVKNNAKKRKMYESFIESLPF------LKSLEVSERLKVVDVIGTKVYNDGEQII-AQGDLADSFFIVESGEVKI 321 (416)
T ss_dssp HHHHHHHHHHHHHSSSSSSSGGGCGG------GTTCCHHHHHHHHHHCEEEEECTTCEEE-CTTSCCCEEEEEEEEEEEE
T ss_pred hhhhhhhcchhHHHHHHHHHHhhchH------hhcCCHHHHHHHHhhceEEEECCCCEEE-eCCCcCCEEEEEEeCEEEE
Confidence 1 110000011000000000 00000 0001111111 22344567888888773 3444455889999999998
Q ss_pred EeCCE------------EEEccCCcEE
Q 025000 214 RLGDS------------WYPVQAGDVL 228 (259)
Q Consensus 214 ~~~g~------------~~~v~~GD~i 228 (259)
...+. ...+++||++
T Consensus 322 ~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 322 TMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp ECC------------CEEEEECTTCEE
T ss_pred EEecCCcccccCCceeEEEEeCCCCEe
Confidence 76532 4667899975
No 370
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=50.29 E-value=38 Score=27.06 Aligned_cols=49 Identities=16% Similarity=0.093 Sum_probs=36.1
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCE---EEEccCCcEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS---WYPVQAGDVLW 229 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~---~~~v~~GD~i~ 229 (259)
.++..++++|..+-. +-....+.|+|++|...+.. +|+ ...+.+||++-
T Consensus 28 ~~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 28 VVTERNFQPDELVVE-QDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp TEEEEEECTTCBCCC-TTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred hcEEEEECCCCEEEe-CCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 467889999999843 55556689999999998764 454 35678999863
No 371
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=49.54 E-value=73 Score=25.63 Aligned_cols=66 Identities=17% Similarity=0.142 Sum_probs=40.3
Q ss_pred EEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeCC----CC---cEEEEeC-CeEEEEEEE
Q 025000 68 ANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP----NF---AHSLRAE-GSATLVVFE 134 (259)
Q Consensus 68 ~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p~----~~---~H~~~N~-~~a~~l~v~ 134 (259)
.++++|...-......+.+++|++|.+.+.. .+|++ ..+ +||++=..+ .. ++..... ++++++.+.
T Consensus 21 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~~v~~i~ 99 (238)
T 2bgc_A 21 KQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIK 99 (238)
T ss_dssp EEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECSSEEEEEEEE
T ss_pred EEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEEcceEEEEEe
Confidence 3455664432222346789999999999875 24543 345 899875432 22 4555554 478888774
No 372
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=49.30 E-value=20 Score=28.84 Aligned_cols=69 Identities=4% Similarity=0.012 Sum_probs=43.2
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~~ 135 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=. ...........++++++.+.+
T Consensus 35 ~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~ 113 (232)
T 2gau_A 35 PFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPV 113 (232)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEEEEH
Confidence 45667775442223456789999999999874 13443 48899998721 112344556677888888743
No 373
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=48.97 E-value=72 Score=25.83 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=43.4
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeC---CCCc----EEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP---PNFA----HSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p---~~~~----H~~~N~~~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+.+.. .+|+. ..+.+||++=.. .+.+ ......++++++.+.
T Consensus 45 ~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~ 124 (243)
T 3la7_A 45 VETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAP 124 (243)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEESSSEEEEEEE
T ss_pred eEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEccceEEEEEc
Confidence 44566665442223446789999999999875 24554 368899976321 1222 445557788888874
Q ss_pred E
Q 025000 135 R 135 (259)
Q Consensus 135 ~ 135 (259)
+
T Consensus 125 ~ 125 (243)
T 3la7_A 125 I 125 (243)
T ss_dssp H
T ss_pred H
Confidence 3
No 374
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=48.91 E-value=24 Score=27.72 Aligned_cols=68 Identities=7% Similarity=-0.011 Sum_probs=41.8
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe-----CCCCcEEEEeCCeEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~-----p~~~~H~~~N~~~a~~l~v~ 134 (259)
..++++|...-......+.+++|++|.+++.. .+|+. ..+.+||++=. ......+.+..++++++.+.
T Consensus 64 ~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~~l~~~~~~~~v~A~~~~~v~~i~ 141 (187)
T 3gyd_A 64 CYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPTDFAVLS 141 (187)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEEEEEEEEEEEE
T ss_pred EEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHHHhCCCCeeEEEEECCCeEEEEEc
Confidence 45566775442223456899999999999876 23433 47899997631 22223344445667777764
No 375
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=48.43 E-value=11 Score=30.18 Aligned_cols=49 Identities=6% Similarity=0.029 Sum_probs=35.7
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW 229 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~ 229 (259)
.+...++++|..+- .+-....+.|+|++|...+.. +|+. ..+++||++-
T Consensus 31 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 31 SSDLVNLDKGAYVF-RQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp SCEEEECCTTEEEE-CTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred hCEEEEECCCCEEE-cCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 45678889999874 344556688999999998765 4544 4566999864
No 376
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=48.29 E-value=10 Score=32.29 Aligned_cols=49 Identities=14% Similarity=0.111 Sum_probs=38.5
Q ss_pred EEEEEceEEEEeCCEEEE---ccCCcEEEeCCCCceeEEeC--CCccEEEEEEe
Q 025000 204 LLLLEGQGIYRLGDSWYP---VQAGDVLWMAPFVPQWYAAL--GKTRTRYLLYK 252 (259)
Q Consensus 204 ~~il~G~g~~~~~g~~~~---v~~GD~i~~~~~~~H~~~n~--G~e~~~fi~~k 252 (259)
.-+-.|.-++.-||.... |+.||.+..++|.|+-..|+ |.+.+--|.-|
T Consensus 10 ~~Fa~GT~VLMADGS~K~IEdI~vGD~Vmg~DG~pR~V~~l~rG~d~mY~I~~k 63 (237)
T 1gpp_A 10 ACFAKGTNVLMADGSIECIENIEVGNKVMGKDGRPREVIKLPRGSETMYSVVQK 63 (237)
T ss_dssp EEECTTCEEEBTTSCEEEGGGCCTTCEEEBTTSSEEEEEECCEEEEEEEEEEEC
T ss_pred cccCCCCEEEEeCCCcceeeecccCCEEecCCCCcceEEEeccccceeEEEeec
Confidence 567789999999997765 68999999999999988888 44555555544
No 377
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=46.53 E-value=20 Score=32.94 Aligned_cols=26 Identities=8% Similarity=0.230 Sum_probs=22.3
Q ss_pred cEEEEeCCcEEEeCCCCcEEEEeCCe
Q 025000 102 VSSKLMVDSYTYLPPNFAHSLRAEGS 127 (259)
Q Consensus 102 e~~~L~~Gd~i~~p~~~~H~~~N~~~ 127 (259)
...++++||.+|+|+|=-|...|.+.
T Consensus 245 ~~v~l~pGe~lfIPsGW~H~V~nled 270 (397)
T 3kv9_A 245 YKCVVKQGHTLFVPTGWIHAVLTSQD 270 (397)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEEECCCCEEEeCCCCeEEccCCcC
Confidence 35689999999999999999999443
No 378
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=45.68 E-value=31 Score=29.59 Aligned_cols=65 Identities=9% Similarity=0.015 Sum_probs=42.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CC--EEEEccCCcEE-----EeCCCCceeEEeCCCcc
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GD--SWYPVQAGDVL-----WMAPFVPQWYAALGKTR 245 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g--~~~~v~~GD~i-----~~~~~~~H~~~n~G~e~ 245 (259)
.+...++++|..+= .+-..-.+.|+|++|...+.. +| ....+.+||++ +...-....+.+..+..
T Consensus 35 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~ 109 (333)
T 4ava_A 35 SVQPLRAAAGQVLL-RQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLT 109 (333)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEE
T ss_pred hCeEEEECCCCEEE-eCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEE
Confidence 45678889998873 345555688999999998764 23 46678999986 11122235566654433
No 379
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=45.14 E-value=25 Score=27.71 Aligned_cols=66 Identities=12% Similarity=0.030 Sum_probs=40.3
Q ss_pred EEecCCCcCCCCCCCc--eEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEe----CCCCcEEEEeCCeEEEEEE
Q 025000 68 ANMQENARSALPPHDV--ERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL----PPNFAHSLRAEGSATLVVF 133 (259)
Q Consensus 68 ~~l~Pg~~~~~h~~~~--Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~----p~~~~H~~~N~~~a~~l~v 133 (259)
.++++|...-...... +.+++|++|.+.+.. .+|++ ..+.+||++=. .....+.....++++++.+
T Consensus 8 ~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 8 VSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp EEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred EEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 3455554332222344 678999999999875 24554 36889998733 1223344555677888877
No 380
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=44.76 E-value=20 Score=34.23 Aligned_cols=25 Identities=8% Similarity=0.157 Sum_probs=21.9
Q ss_pred EEEEeCCcEEEeCCCCcEEEEeCCe
Q 025000 103 SSKLMVDSYTYLPPNFAHSLRAEGS 127 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~N~~~ 127 (259)
..+++||+.+|+|+|--|.+.|.+.
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCCC
Confidence 4689999999999999999999443
No 381
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=44.18 E-value=12 Score=35.85 Aligned_cols=25 Identities=8% Similarity=-0.072 Sum_probs=22.5
Q ss_pred EEEccCCcEEEeCCCCceeEEeCCC
Q 025000 219 WYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 219 ~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
...++|||.+|+|+|..|...|.-+
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCCC
Confidence 5789999999999999999999843
No 382
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=43.66 E-value=1.8 Score=32.35 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=24.7
Q ss_pred EEEEc--eEEEEeCC-EEEEccCCcEEEeCCCCc
Q 025000 205 LLLEG--QGIYRLGD-SWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 205 ~il~G--~g~~~~~g-~~~~v~~GD~i~~~~~~~ 235 (259)
|++.| .|.+.+|| --+.+++||.+.+.+|..
T Consensus 34 YvI~GeGSG~I~lNGAAArl~~~GD~vII~aY~~ 67 (102)
T 3plx_B 34 YTIATQEEGVVCLNGAAARLAEVGDKVIIMSYAD 67 (102)
T ss_dssp ECEEESSTTCEEEEGGGGGGCCTTCEEEEEEEEE
T ss_pred EEEEcCCCCEEEeCcHHHhccCCCCEEEEEEccc
Confidence 55555 58899999 467899999999988754
No 383
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=43.60 E-value=23 Score=26.24 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=20.1
Q ss_pred EEEEeCCEEEEccCCcEEEeCC
Q 025000 211 GIYRLGDSWYPVQAGDVLWMAP 232 (259)
Q Consensus 211 g~~~~~g~~~~v~~GD~i~~~~ 232 (259)
+++..+|+-|.|.+||++++.-
T Consensus 3 AIi~~gGkQykV~~Gd~i~vek 24 (101)
T 3v2d_V 3 AIVKTGGKQYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEEETTEEEEECTTCEEEESC
T ss_pred EEEEeCCEEEEEeCCCEEEECC
Confidence 5788999999999999999984
No 384
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=41.89 E-value=55 Score=26.41 Aligned_cols=67 Identities=9% Similarity=0.076 Sum_probs=42.7
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEceEEEEe---CCEE---EEccCCcEEEeCC---CC----ceeEEeCCCccEE
Q 025000 181 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWMAP---FV----PQWYAALGKTRTR 247 (259)
Q Consensus 181 ~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~---~g~~---~~v~~GD~i~~~~---~~----~H~~~n~G~e~~~ 247 (259)
++..++++|..+- .+-....+.|+|++|...+.. +|+. .-+ +||++--.+ +. ++...+.- ++++
T Consensus 18 ~~~~~~~~ge~i~-~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~ 94 (238)
T 2bgc_A 18 IKPKQFHKKELIF-NQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQAT 94 (238)
T ss_dssp CCCEEEETTCEEE-CTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEE
T ss_pred ceEEEECCCCEEE-eCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceE
Confidence 4567788998873 344455688999999998764 4543 334 899875432 22 45666664 4555
Q ss_pred EEE
Q 025000 248 YLL 250 (259)
Q Consensus 248 fi~ 250 (259)
.+.
T Consensus 95 v~~ 97 (238)
T 2bgc_A 95 AYV 97 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 385
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=41.06 E-value=2.1 Score=31.67 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=25.8
Q ss_pred EEEEEce--EEEEeCC-EEEEccCCcEEEeCCCCc
Q 025000 204 LLLLEGQ--GIYRLGD-SWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 204 ~~il~G~--g~~~~~g-~~~~v~~GD~i~~~~~~~ 235 (259)
-|++.|+ |++.+|| --+.+++||.+.+.+|..
T Consensus 32 TYvI~GerSG~I~lNGAAArl~~~GD~vII~aY~~ 66 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAAARKVAIGDVVIILAYAS 66 (97)
T ss_dssp EECEEECSTTCEEEEGGGGGGCCTTCEEEEEEEEE
T ss_pred EEEEeeccCCeEEEchHHHccCCCCCEEEEEECcc
Confidence 3778884 8899999 467899999999987753
No 386
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=39.83 E-value=38 Score=34.33 Aligned_cols=69 Identities=16% Similarity=0.066 Sum_probs=43.1
Q ss_pred EEEEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCC------c--EEEEeCCcEEEe--CCCC--cEEEEeCCeEEEEE
Q 025000 65 MYLANMQENARSALPPHDVERFIFVVQGSAMLTNASG------V--SSKLMVDSYTYL--PPNF--AHSLRAEGSATLVV 132 (259)
Q Consensus 65 ~~~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~g------e--~~~L~~Gd~i~~--p~~~--~H~~~N~~~a~~l~ 132 (259)
|.+..+++|...=.....++.|++|++|++.|.+ .+ + -..|.+||++-- =-+. ..+.+..++++++.
T Consensus 65 m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i-~~~~~~~~~~~v~~l~~G~sFGEall~n~pRtaTv~a~~~s~l~~ 143 (999)
T 4f7z_A 65 GYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKV-SETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLR 143 (999)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-CSSSCTTSCEEEEEEETTCEECGGGGGTCCCSSEEEESSSEEEEE
T ss_pred eEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEE-ecCCCCCCceeEEEecCCcchhhhhccCCCcceEEEeccceEEEE
Confidence 3455677775442234567899999999999988 32 1 247999998732 0011 22344466777777
Q ss_pred EE
Q 025000 133 FE 134 (259)
Q Consensus 133 v~ 134 (259)
+.
T Consensus 144 l~ 145 (999)
T 4f7z_A 144 IE 145 (999)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 387
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=39.61 E-value=38 Score=34.36 Aligned_cols=55 Identities=9% Similarity=0.107 Sum_probs=39.3
Q ss_pred CCCceEEEEEEECEEEEEEcCCc--EEEEeCCcEEEe---CCCCcEE--EEe-CCeEEEEEEEE
Q 025000 80 PHDVERFIFVVQGSAMLTNASGV--SSKLMVDSYTYL---PPNFAHS--LRA-EGSATLVVFER 135 (259)
Q Consensus 80 ~~~~Eef~yVl~G~l~v~v~~ge--~~~L~~Gd~i~~---p~~~~H~--~~N-~~~a~~l~v~~ 135 (259)
...++.+++|++|+++|.. .++ ..+|++||++=- --+.++. ++. ...|.|+.+.+
T Consensus 376 GE~gds~YIIlsG~V~V~~-~~~~~v~~L~~Gd~FGElALL~~~PR~aTV~a~~d~c~fl~i~k 438 (999)
T 4f7z_A 376 GEEGTSWYIILKGSVNVVI-YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDK 438 (999)
T ss_dssp TSBCCEEEEEEESEEEEEE-TTTEEEEEEETTCEECGGGGTCSCBCSSEEEESSSSEEEEEEEH
T ss_pred CCcCCeEEEEEeeEEEEEE-cCCcceEEecCCCcccchhhccCCCeeEEEEEecCceEEEEeeH
Confidence 3457899999999999987 553 468999999742 3355654 333 33588888864
No 388
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=38.26 E-value=22 Score=26.42 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=19.8
Q ss_pred EEEEeCCEEEEccCCcEEEeCC
Q 025000 211 GIYRLGDSWYPVQAGDVLWMAP 232 (259)
Q Consensus 211 g~~~~~g~~~~v~~GD~i~~~~ 232 (259)
+++..+|+-|.|.+||++.++-
T Consensus 3 AIi~~gGkQykV~~Gd~i~vek 24 (103)
T 3r8s_R 3 AVFQSGGKQHRVSEGQTVRLEK 24 (103)
T ss_dssp EEEECSSSEEEEETTCEEEESC
T ss_pred EEEEECCEEEEEeCCCEEEECC
Confidence 5788999999999999999974
No 389
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=38.02 E-value=42 Score=27.77 Aligned_cols=68 Identities=12% Similarity=0.125 Sum_probs=43.0
Q ss_pred EEEEEEecCCCcCCCCCCC---ceEEEEEE----ECEEEEEEcCC------------------c---EEEEeCCcEEEeC
Q 025000 64 VMYLANMQENARSALPPHD---VERFIFVV----QGSAMLTNASG------------------V---SSKLMVDSYTYLP 115 (259)
Q Consensus 64 ~~~~~~l~Pg~~~~~h~~~---~Eef~yVl----~G~l~v~v~~g------------------e---~~~L~~Gd~i~~p 115 (259)
+.+....++|+....|.|. .--.+||- .|++.+.- .. + ...-++|+.+.||
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~-p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFp 182 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLED-PRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWE 182 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEEC-TTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEE
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeC-CccccccccCcccccCcccCCCeeEecCCCCeEEEEC
Confidence 5677888888877766443 23333442 35666653 21 1 3456899999999
Q ss_pred CCCcEEEEe--CCeEEEEE
Q 025000 116 PNFAHSLRA--EGSATLVV 132 (259)
Q Consensus 116 ~~~~H~~~N--~~~a~~l~ 132 (259)
+...|...- ...-|+.+
T Consensus 183 S~l~H~V~p~~~~~~RiSI 201 (216)
T 2rg4_A 183 SWLRHEVPMNMAEEDRISV 201 (216)
T ss_dssp TTSCEEECCCCSSSCEEEE
T ss_pred CCCEEeccCCCCCCCEEEE
Confidence 999999873 33346554
No 390
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=37.24 E-value=24 Score=28.06 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=42.5
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEEeCCcEEEeCC---CC---cEEEEeCCeEEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP---NF---AHSLRAEGSATLVVFER 135 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v--~~ge~---~~L~~Gd~i~~p~---~~---~H~~~N~~~a~~l~v~~ 135 (259)
..++++|...-......+.+++|++|.+.+.. .+|+. ..+++||++=..+ +. .......++++++.+.+
T Consensus 34 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 113 (227)
T 3dkw_A 34 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSN 113 (227)
T ss_dssp EEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEEEEES
T ss_pred EEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEEEEeH
Confidence 34555664432223446789999999999875 13433 4788999874322 22 33455567788888743
No 391
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.91 E-value=45 Score=30.06 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=36.1
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEceEEEEeC---C-----EEEEccCCcEEE
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG---D-----SWYPVQAGDVLW 229 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~---g-----~~~~v~~GD~i~ 229 (259)
.++..++++|..+= .+-....+.|+|++|...+... | ....+.+||++=
T Consensus 64 ~~~~~~~~~g~~i~-~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 64 CGYYENLEKGITLF-RQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEEC
T ss_pred hceEEEECCCCEEE-eCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcc
Confidence 45677999999883 3444556889999999988753 2 356788999763
No 392
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=33.82 E-value=4.7 Score=31.78 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=35.7
Q ss_pred CCCcceEEEEEEecCCcccCcceeeccceEEEEEE---ceEEEEeCCE-EEEccCCcEEEeCCCCc
Q 025000 174 AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLE---GQGIYRLGDS-WYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 174 ~~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~---G~g~~~~~g~-~~~v~~GD~i~~~~~~~ 235 (259)
+....-.+.+..+.-|..+ ++ |++. |.|++.+||. -+.+++||.|.+.+|..
T Consensus 54 gIl~~EkV~IvNvnNG~Rf---------eT-YvI~GerGSG~I~lNGAAArl~~~GD~VII~sYa~ 109 (143)
T 1pqh_A 54 GILENEAIDIWNVTNGKRF---------ST-YAIAAERGSRIISVNGAAAHCASVGDIVIIASFVT 109 (143)
T ss_dssp TCCTTCEEEEEETTTCCEE---------EE-EEEEECTTCCCEECCGGGGGTCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEEECCCCceE---------EE-EEEEccCCCceEEechHHHccCCCCCEEEEEECcc
Confidence 3333334567776667654 33 4444 5699999994 57899999999988754
No 393
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=33.28 E-value=26 Score=31.25 Aligned_cols=49 Identities=8% Similarity=0.146 Sum_probs=37.7
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEE-EEccCCcEE
Q 025000 179 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW-YPVQAGDVL 228 (259)
Q Consensus 179 ~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~-~~v~~GD~i 228 (259)
-.+...++++|..+= .+-..-.+.|+|++|...+..+|+. ..+.+||++
T Consensus 151 ~~~~~~~~~~ge~I~-~~Gd~~~~~yiI~~G~v~v~~~~~~v~~l~~G~~f 200 (381)
T 4din_B 151 DAMFPVTHIAGETVI-QQGNEGDNFYVVDQGEVDVYVNGEWVTNISEGGSF 200 (381)
T ss_dssp HHCEEEECCTTCBSS-CTTSBCCEEEECSSSEEEEEETTEEEEEEESSCCB
T ss_pred HhceEEEECCCCEEE-eCCCCCCeEEEEEeeEEEEEECCeEeeeCCCCCEE
Confidence 346788999999884 3444555889999999999988854 557888874
No 394
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=32.79 E-value=3.3 Score=30.58 Aligned_cols=31 Identities=19% Similarity=0.376 Sum_probs=24.2
Q ss_pred EEEE---ceEEEEeCC-EEEEccCCcEEEeCCCCc
Q 025000 205 LLLE---GQGIYRLGD-SWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 205 ~il~---G~g~~~~~g-~~~~v~~GD~i~~~~~~~ 235 (259)
|++. |.|.+.+|| --+.+++||.+.+.+|..
T Consensus 34 YvI~GerGSG~I~lNGAAArl~~~GD~vII~aY~~ 68 (96)
T 1vc3_B 34 YALPGERGSGVIGINGAAAHLVKPGDLVILVAYGV 68 (96)
T ss_dssp ECEEECTTTTCEEEEGGGGGTCCTTCEEEEEEEEE
T ss_pred EEEEccCCCCeEEEchHHHccCCCCCEEEEEECcc
Confidence 4554 468999999 467899999999987753
No 395
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=32.09 E-value=2.1e+02 Score=23.42 Aligned_cols=83 Identities=7% Similarity=-0.062 Sum_probs=49.4
Q ss_pred cCCCCCCccc-CCceEEEEEee-CCC--CCcceEEEEEEecCCcccCcceeeccceEEEEEEce-EEEEeCC-EEEEccC
Q 025000 151 STDKQPLLET-PGEVFQLRKLL-PQA--VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQ-GIYRLGD-SWYPVQA 224 (259)
Q Consensus 151 ~~~di~~~~~-~g~~~~~~~l~-p~~--~~~~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~-g~~~~~g-~~~~v~~ 224 (259)
...|.+..+- +|++.+.+.+. |.+ ..|++-+.+-+++- .-|+-.--+.+-.+.+|+|+ ..+..+| ..+.+++
T Consensus 15 ~~~d~~~~pWkNGgG~TrEI~~~P~~~~~~F~wRiSiA~V~~--~g~FS~FpG~dR~l~lL~G~gl~L~~~g~~~~~L~~ 92 (193)
T 3esg_A 15 RAVDYVRMPWKNGGGSTEEITRDAGTGLEGFGWRLSIADIGE--SGGFSSFAGYQRVITVIQGAGMVLTVDGEEQRGLLP 92 (193)
T ss_dssp CGGGCEEEECTTSSEEEEEEEECCCBTTTBCSEEEEEEEECS--SEECCCCTTCEEEEEEEESSCEEEEETTSCCEEECB
T ss_pred cHHHCCcccccCCCeEEEEEEEcCCCcCCCceEEEEEEEEcC--CCCCCCCCCceEEEEEEcCCcEEEEeCCCccEecCC
Confidence 3445555554 46776777755 643 23666555656554 23333344566779999998 5566666 5677788
Q ss_pred CcEEEeCCCCc
Q 025000 225 GDVLWMAPFVP 235 (259)
Q Consensus 225 GD~i~~~~~~~ 235 (259)
.+....+-..+
T Consensus 93 ~~p~~F~G~~~ 103 (193)
T 3esg_A 93 LQPFAFRGDSQ 103 (193)
T ss_dssp TCCEEEETTSC
T ss_pred CCCEEeCCCCe
Confidence 77654444433
No 396
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=31.91 E-value=78 Score=24.62 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=26.6
Q ss_pred EEEEccCCcEEEeCCCCceeEEeC--CC-ccEEEEEEe
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYAAL--GK-TRTRYLLYK 252 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~n~--G~-e~~~fi~~k 252 (259)
.+..+++|+|+.+-|++.|.-... |. ++.+=+++|
T Consensus 112 ~~v~l~~G~FaiFfP~d~H~p~~~~~~~~~~irKvVvK 149 (155)
T 1s4c_A 112 FTVTMKPKMFAVFYPYEPHKPCCVVNGKTEKIKKLVVK 149 (155)
T ss_dssp EEEEECTTEEEEECTTCCEEEEEC-----CBCEEEEEE
T ss_pred EEEEeCCCEEEEECCCcccccccccCCCCCcEEEEEEE
Confidence 678899999999999999997664 33 456666655
No 397
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=31.02 E-value=5.3 Score=31.36 Aligned_cols=46 Identities=20% Similarity=0.414 Sum_probs=33.5
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEE---ceEEEEeCCE-EEEccCCcEEEeCCCCc
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQHGLLLLE---GQGIYRLGDS-WYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~eh~~~il~---G~g~~~~~g~-~~~v~~GD~i~~~~~~~ 235 (259)
.+.+..+.-|..+ ++ |++. |.|++.+||. -+.+++||.|.+.+|..
T Consensus 43 kV~IvNvnNG~Rf---------eT-YvI~GerGSG~I~lNGAAArl~~~GD~vII~aYa~ 92 (139)
T 2c45_A 43 QVTIVDIDNGARL---------VT-YAITGERGSGVIGINGAAAHLVHPGDLVILIAYAT 92 (139)
T ss_dssp CEEEEETTTCCEE---------EE-CEEEECTTTTCEEEESSTTTTSCTTCEEEEEECCE
T ss_pred EEEEEECCCCceE---------EE-EEEEccCCCCEEEEchHHHccCCCCCEEEEEECCc
Confidence 3566666666653 23 4444 4689999994 67899999999998865
No 398
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=30.54 E-value=56 Score=29.49 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=38.9
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcC---------Cc---EEEEeCCcEEEeC---CCCcE--EEEeCCeEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNAS---------GV---SSKLMVDSYTYLP---PNFAH--SLRAEGSAT 129 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~---------ge---~~~L~~Gd~i~~p---~~~~H--~~~N~~~a~ 129 (259)
...+.+|...-......+.+++|++|++.+.. . |+ ...|++||++=-- .+.++ +.+..++++
T Consensus 292 ~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~-~~~~~~~~~~g~~~~l~~l~~G~~fGE~all~~~~r~~tv~A~~~~~ 370 (416)
T 3tnp_B 292 TKVYNDGEQIIAQGDLADSFFIVESGEVKITM-KRKGKSEVEENGAVEIARCFRGQYFGELALVTNKPRAASAHAIGTVK 370 (416)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEEC-C------------CEEEEECTTCEESGGGGTCCSCCSSEEEEEEEEE
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeCEEEEEE-ecCCcccccCCceeEEEEeCCCCEecHHHHhCCCCceeEEEEcCCeE
Confidence 44566665432223457899999999999976 3 22 3578899976211 12232 233344566
Q ss_pred EEEEE
Q 025000 130 LVVFE 134 (259)
Q Consensus 130 ~l~v~ 134 (259)
++.+.
T Consensus 371 ll~I~ 375 (416)
T 3tnp_B 371 CLAMD 375 (416)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66653
No 399
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=30.26 E-value=80 Score=30.88 Aligned_cols=67 Identities=9% Similarity=0.016 Sum_probs=43.8
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCc--EEEEeCCcEEEeC---CCC--cEEEEeCC-eEEEEEEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV--SSKLMVDSYTYLP---PNF--AHSLRAEG-SATLVVFE 134 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge--~~~L~~Gd~i~~p---~~~--~H~~~N~~-~a~~l~v~ 134 (259)
...+++|...-......+.+++|++|.+++.. .|+ ...+.+||++=-- .+. ....+..+ +++++.+.
T Consensus 58 ~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~-~g~~il~~l~~Gd~fGe~al~~~~~~~~tv~A~edd~~ll~I~ 132 (694)
T 3cf6_E 58 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI-YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVD 132 (694)
T ss_dssp EEECSTTCEEECTTSBCCEEEEEEESEEEEEE-TTTEEEEEEETTCEECHHHHHHTCBCSSEEEECSSSEEEEEEE
T ss_pred EEEECCCCEEECCCCcCCeEEEEEEEEEEEEE-eCCEEEEEeCCCCEeehHHHhCCCCceEEEEEeeCceEEEEEe
Confidence 45667775442223456789999999999987 665 3689999965211 122 33455566 48888874
No 400
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=26.31 E-value=14 Score=32.57 Aligned_cols=49 Identities=8% Similarity=0.024 Sum_probs=0.0
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEceEEEEeCCEEEEccCCcEE
Q 025000 178 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVL 228 (259)
Q Consensus 178 ~~~~~~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~~~~v~~GD~i 228 (259)
...++..+++||..+=. +.....+.|+|++|+..+...+ ...+++||++
T Consensus 248 ~~~~~~~~~~~ge~I~~-~G~~~~~ly~I~~G~v~v~~~~-~~~l~~G~~f 296 (355)
T 3beh_A 248 VRALRARTVPAGAVICR-IGEPGDRMFFVVEGSVSVATPN-PVELGPGAFF 296 (355)
T ss_dssp ---------------------------------------------------
T ss_pred HHhceEEEECCCCEEEe-CCCcCceEEEEEeeEEEEEECC-eeEECCCCEE
Confidence 34567888999998843 4555567899999999988777 5789999975
No 401
>2lnu_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Haloarcula marismortui}
Probab=25.00 E-value=71 Score=26.27 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=21.9
Q ss_pred CceEEEEEEECEEEEEEcCCcEEEEeC
Q 025000 82 DVERFIFVVQGSAMLTNASGVSSKLMV 108 (259)
Q Consensus 82 ~~Eef~yVl~G~l~v~v~~ge~~~L~~ 108 (259)
.+.+-.|+.-|++++++ +|+.++|..
T Consensus 72 ~g~~~~~~~~G~~~F~l-~G~~~~L~~ 97 (190)
T 2lnu_A 72 DDRTVRYLHVATLSFDL-DGESRDLHA 97 (190)
T ss_dssp SSSEEEEEEEEEEEEEE-TTEEEEEEE
T ss_pred CCceEEEEEeEEEEEEE-CCEEEEEEE
Confidence 45667799999999999 999988865
No 402
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=24.96 E-value=70 Score=31.28 Aligned_cols=45 Identities=13% Similarity=0.094 Sum_probs=34.4
Q ss_pred EEEecCCcccCcceeeccceEEEEEEceEEEEeCCE--EEEccCCcEE
Q 025000 183 IMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS--WYPVQAGDVL 228 (259)
Q Consensus 183 ~~t~~PG~~~~~~~~H~~eh~~~il~G~g~~~~~g~--~~~v~~GD~i 228 (259)
..++++|..+= .+-....+.|+|++|...+...|+ ...+.+||++
T Consensus 58 ~~~~~kGe~I~-~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLF-NQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEE-CTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred EEEECCCCEEE-CCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEe
Confidence 56889999873 344455578999999999887664 6678899965
No 403
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=24.42 E-value=1.4e+02 Score=23.13 Aligned_cols=21 Identities=10% Similarity=0.113 Sum_probs=16.5
Q ss_pred EEEEeCCcEEEeCCCCcEEEE
Q 025000 103 SSKLMVDSYTYLPPNFAHSLR 123 (259)
Q Consensus 103 ~~~L~~Gd~i~~p~~~~H~~~ 123 (259)
...|++|+++.|-|+.+|+..
T Consensus 113 ~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 113 TVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp EEEECTTEEEEECTTCCEEEE
T ss_pred EEEeCCCEEEEECCCcccccc
Confidence 347888888888888888864
No 404
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=23.74 E-value=1.3e+02 Score=24.63 Aligned_cols=63 Identities=13% Similarity=0.052 Sum_probs=41.7
Q ss_pred EEEEEEecCCcccCcceeeccc---eEEEEE----EceEEEEeC-------------------CE--EEEccCCcEEEeC
Q 025000 180 NIHIMDFQPGDFLNVKEVHYNQ---HGLLLL----EGQGIYRLG-------------------DS--WYPVQAGDVLWMA 231 (259)
Q Consensus 180 ~~~~~t~~PG~~~~~~~~H~~e---h~~~il----~G~g~~~~~-------------------g~--~~~v~~GD~i~~~ 231 (259)
.+-...++||+.... |.|... =++|+- .|.-.+... .. ...-++||+|..+
T Consensus 104 ~~W~~~~~~G~~~~~-H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFp 182 (216)
T 2rg4_A 104 DIWINILPEGGVHGS-HIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWE 182 (216)
T ss_dssp EEEEEEECTTCCEEE-ECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEE
T ss_pred eEEEEEcCCCCcccC-ccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEEC
Confidence 355667789998775 555432 345553 244454432 11 5678999999999
Q ss_pred CCCceeEEeCCC
Q 025000 232 PFVPQWYAALGK 243 (259)
Q Consensus 232 ~~~~H~~~n~G~ 243 (259)
+..+|+..-...
T Consensus 183 S~l~H~V~p~~~ 194 (216)
T 2rg4_A 183 SWLRHEVPMNMA 194 (216)
T ss_dssp TTSCEEECCCCS
T ss_pred CCCEEeccCCCC
Confidence 999999987433
No 405
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=23.47 E-value=51 Score=30.03 Aligned_cols=25 Identities=12% Similarity=0.026 Sum_probs=21.9
Q ss_pred EEEccCCcEEEeCCCCceeEEeCCC
Q 025000 219 WYPVQAGDVLWMAPFVPQWYAALGK 243 (259)
Q Consensus 219 ~~~v~~GD~i~~~~~~~H~~~n~G~ 243 (259)
...=+|||+|++-|+.-|+-.|.|-
T Consensus 306 r~vQ~pGEfViTfP~aYH~gfn~Gf 330 (373)
T 3opt_A 306 EIVHHEGEFMITYPYGYHAGFNYGY 330 (373)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSS
T ss_pred EEEECCCCEEEECCCceEEEEecCc
Confidence 3445799999999999999999996
No 406
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=23.19 E-value=51 Score=29.84 Aligned_cols=26 Identities=15% Similarity=0.083 Sum_probs=22.7
Q ss_pred EEEccCCcEEEeCCCCceeEEeCCCc
Q 025000 219 WYPVQAGDVLWMAPFVPQWYAALGKT 244 (259)
Q Consensus 219 ~~~v~~GD~i~~~~~~~H~~~n~G~e 244 (259)
...=+|||+|++-|+.-|+-.|.|-.
T Consensus 263 ~~vQ~pGEfViTfP~aYH~gfn~Gfn 288 (354)
T 3dxt_A 263 RITQEAGEFMVTFPYGYHAGFNHGFN 288 (354)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEeCCCcEEEECCCceEEEeecccc
Confidence 44568999999999999999999963
No 407
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=22.26 E-value=1.1e+02 Score=22.51 Aligned_cols=15 Identities=27% Similarity=0.403 Sum_probs=12.8
Q ss_pred EccCCcEEEeCCCCc
Q 025000 221 PVQAGDVLWMAPFVP 235 (259)
Q Consensus 221 ~v~~GD~i~~~~~~~ 235 (259)
++.+||+|.+.+|+.
T Consensus 29 ~l~~GDiv~v~~G~~ 43 (113)
T 2hc8_A 29 EVAVGDIVIVRPGEK 43 (113)
T ss_dssp GCCTTCEEEECTTCB
T ss_pred HCCCCCEEEECCCCE
Confidence 478899999999864
No 408
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=21.79 E-value=89 Score=22.94 Aligned_cols=22 Identities=9% Similarity=0.080 Sum_probs=18.9
Q ss_pred EEEEEcCCcEEEEeCCcEEEeCC
Q 025000 94 AMLTNASGVSSKLMVDSYTYLPP 116 (259)
Q Consensus 94 l~v~v~~ge~~~L~~Gd~i~~p~ 116 (259)
+.+.. +|+-+.+.+||.++++-
T Consensus 3 AIi~~-gGkQykV~~Gd~i~vek 24 (101)
T 3v2d_V 3 AIVKT-GGKQYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEEE-TTEEEEECTTCEEEESC
T ss_pred EEEEe-CCEEEEEeCCCEEEECC
Confidence 35677 99999999999999984
No 409
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=21.07 E-value=79 Score=23.29 Aligned_cols=21 Identities=10% Similarity=0.169 Sum_probs=18.3
Q ss_pred EEEEcCCcEEEEeCCcEEEeCC
Q 025000 95 MLTNASGVSSKLMVDSYTYLPP 116 (259)
Q Consensus 95 ~v~v~~ge~~~L~~Gd~i~~p~ 116 (259)
.+.. +|+-+.+.+||.+.++-
T Consensus 4 Ii~~-gGkQykV~~Gd~i~vek 24 (103)
T 3r8s_R 4 VFQS-GGKQHRVSEGQTVRLEK 24 (103)
T ss_dssp EEEC-SSSEEEEETTCEEEESC
T ss_pred EEEE-CCEEEEEeCCCEEEECC
Confidence 4666 89999999999999984
No 410
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=20.89 E-value=18 Score=30.73 Aligned_cols=46 Identities=15% Similarity=0.061 Sum_probs=29.6
Q ss_pred ceeeccceEEEEEEceEEEEeCCE------EEEccCCcEEEeCCCCceeEEe
Q 025000 195 KEVHYNQHGLLLLEGQGIYRLGDS------WYPVQAGDVLWMAPFVPQWYAA 240 (259)
Q Consensus 195 ~~~H~~eh~~~il~G~g~~~~~g~------~~~v~~GD~i~~~~~~~H~~~n 240 (259)
||||.+.|...-+.....+.++|+ ...+++||.+.+-+|....+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~L~~~~~~Hl~VLRl~~Gd~v~l~dg~G~~~~a 59 (234)
T 1z85_A 8 HHHHHMPHLFYGTAQNGEVIFDEREAHHMRVVRLKEGDVIEATDGNGFSYTC 59 (234)
T ss_dssp ------CCCEECEEETTEEEECHHHHHHHHHTTCCTTCEEEEECSBSEEEEE
T ss_pred cccccCCCCCCccCCCCEEEeCHHHHHHHHhhcCCCCCEEEEEeCCCCEEEE
Confidence 577788888777776567777773 4568999999988887765543
No 411
>1pg6_A Hypothetical protein SPYM3_0169; structural genomics, PSI structure initiative, northeast structural genomics consort NESG; 1.70A {Streptococcus pyogenes} SCOP: b.82.5.2
Probab=20.55 E-value=74 Score=26.89 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=28.0
Q ss_pred ceEEEEEEce-----EEEEeC-CEEEEccCCcEEEeCCCCc
Q 025000 201 QHGLLLLEGQ-----GIYRLG-DSWYPVQAGDVLWMAPFVP 235 (259)
Q Consensus 201 eh~~~il~G~-----g~~~~~-g~~~~v~~GD~i~~~~~~~ 235 (259)
.+.-|=+.|+ ..+.|+ |+..-+++|-++++.+++.
T Consensus 11 ~~~~~~I~g~~~~~il~v~L~~ge~v~ae~Gamva~~g~V~ 51 (243)
T 1pg6_A 11 NRMRFTIDQNMQFPLVEIDLEHGGSVYLQQGSMVYHTENVT 51 (243)
T ss_dssp -CCEEEECSSCSSCCEEEEECTTCEEEEETTCEEEECTTEE
T ss_pred CCCCEEEeCCCCceEEEEEeCCCCEEEEECCcEEEecCCEE
Confidence 3456778887 788888 7888899999999998766
No 412
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=20.36 E-value=21 Score=31.32 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=0.0
Q ss_pred EEEecCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEEeCCcEE
Q 025000 67 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYT 112 (259)
Q Consensus 67 ~~~l~Pg~~~~~h~~~~Eef~yVl~G~l~v~v~~ge~~~L~~Gd~i 112 (259)
...++||...-......+++++|++|++++.. .+ ...+++||++
T Consensus 253 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~-~~~l~~G~~f 296 (355)
T 3beh_A 253 ARTVPAGAVICRIGEPGDRMFFVVEGSVSVAT-PN-PVELGPGAFF 296 (355)
T ss_dssp ----------------------------------------------
T ss_pred EEEECCCCEEEeCCCcCceEEEEEeeEEEEEE-CC-eeEECCCCEE
Confidence 34556665442223446789999999999987 55 4678888865
No 413
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=20.12 E-value=98 Score=26.34 Aligned_cols=26 Identities=12% Similarity=0.250 Sum_probs=21.4
Q ss_pred EEEEccCCcEEEeCCCCceeEE-eCCC
Q 025000 218 SWYPVQAGDVLWMAPFVPQWYA-ALGK 243 (259)
Q Consensus 218 ~~~~v~~GD~i~~~~~~~H~~~-n~G~ 243 (259)
...++++||++++.+...|+-. |+++
T Consensus 216 v~~~~~aGd~vlf~~~~~H~s~~N~s~ 242 (308)
T 2a1x_A 216 VHLVMEKGDTVFFHPLLIHGSGQNKTQ 242 (308)
T ss_dssp EEECBCTTCEEEECTTCCEEECCBCSS
T ss_pred EEccCCCccEEEECCCccccCCCCCCC
Confidence 5678899999999999999865 5443
Done!