BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025001
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60HC3|HNRPF_MACFA Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis
GN=HNRNPF PE=2 SV=3
Length = 415
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV+LRGLP+ C+ DV F I D V F++ + + +GEAF LG V AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R++MG RY+EVF+S R E + + S DSA + G
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVLKH------------------SGPNSADSA-NDGF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + I + ++ +G+ TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS EE+
Sbjct: 173 KERIGHRYIEVFKSSQEEV 191
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+++LRGLP+S +D+ +F D + + + +H +GR +GEAFVE + +D K A+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR ++G RYIE+F S EMD L
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA E++ AAM+K
Sbjct: 290 CVHMRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
DR + RYIELF +S
Sbjct: 348 DRANMQHRYIELFLNS 363
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 49 YVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQ 107
+ Q V +RGLP+ TE D+ FF L+ V V + + + + TGEA +
Sbjct: 281 FTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEE 340
Query: 108 VDFALQRNRQNMGRRYVEVF 127
A+ ++R NM RY+E+F
Sbjct: 341 AVAAMSKDRANMQHRYIELF 360
>sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF
PE=1 SV=3
Length = 415
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV+LRGLP+ C+ DV F I D V F++ + + +GEAF LG V AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R++MG RY+EVF+S R E + + S DSA + G
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVLKH------------------SGPNSADSA-NDGF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + I + ++ +G+ TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS EE+
Sbjct: 173 KERIGHRYIEVFKSSQEEV 191
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+++LRGLP+S +D+ +F D + + + +H +GR +GEAFVE + +D K A+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR ++G RYIE+F S EMD L
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA E++ AAM+K
Sbjct: 290 CVHMRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
DR + RYIELF +S
Sbjct: 348 DRANMQHRYIELFLNS 363
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 49 YVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQ 107
+ Q V +RGLP+ TE D+ FF L+ V V + + + + TGEA +
Sbjct: 281 FTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEE 340
Query: 108 VDFALQRNRQNMGRRYVEVF 127
A+ ++R NM RY+E+F
Sbjct: 341 AVAAMSKDRANMQHRYIELF 360
>sp|B2RYJ8|ESRP2_RAT Epithelial splicing regulatory protein 2 OS=Rattus norvegicus
GN=Esrp2 PE=2 SV=1
Length = 716
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VVR RGLP+ ++ DVA FF GL+I L ++ + GEA Q D ALQR
Sbjct: 247 VVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQR 306
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +E+ K + GG+ + R S ++ ILR
Sbjct: 307 HKHHMGVRYIEVYKATGEEFVK--------IAGGT-SLEVARFLSREDQV-------ILR 350
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
LRGLPFSAG D++DF D + + DGRPTG+AF FA E ++AA+ +
Sbjct: 351 LRGLPFSAGPADVLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAALRR 410
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 411 HKGMLGKRYIELFRSTAAEVQQVLNR 436
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFH-------GLDIVDVLFV-HKNNKFTGEAFCVLGYPLQVD 109
++RLRGLPF DV +F G+D +LFV H + + TG+AF +
Sbjct: 348 ILRLRGLPFSAGPADVLDFLGPECPVTGGVD--GLLFVRHPDGRPTGDAFALFACEELAQ 405
Query: 110 FALQRNRQNMGRRYVEVFRSKRQEYYKAI---ANEVSDVRGGSPHRSIPRAKSHDEGKDS 166
AL+R++ +G+RY+E+FRS E + + A +P IP + G+D
Sbjct: 406 AALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAPLLPIPFPLAGGTGRDC 465
Query: 167 AVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFANAED 224
+RLRGLP++A +DI+ F + + +H+ +N GRP+G+AF++ + E
Sbjct: 466 ------VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVER 519
Query: 225 SKAAMAK-DRMTLGSRYIELFPSSHEEMDEALSRG 258
+ AA + + + RY+E+ P S EEM L G
Sbjct: 520 ALAAAQRCHKKVMKERYVEVVPCSTEEMSRVLMGG 554
>sp|Q8K0G8|ESRP2_MOUSE Epithelial splicing regulatory protein 2 OS=Mus musculus GN=Esrp2
PE=2 SV=1
Length = 717
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VVR RGLP+ ++ DVA FF GL+I L ++ + GEA Q D ALQR
Sbjct: 248 VVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQR 307
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +E+ K + GG+ + R S ++ ILR
Sbjct: 308 HKHHMGVRYIEVYKATGEEFVK--------IAGGT-SLEVARFLSREDQV-------ILR 351
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
LRGLPFSAG D++ F D + + DGRPTG+AF FA E ++AA+ +
Sbjct: 352 LRGLPFSAGPTDVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRR 411
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 412 HKGMLGKRYIELFRSTAAEVQQVLNR 437
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFH-------GLDIVDVLFV-HKNNKFTGEAFCVLGYPLQVD 109
++RLRGLPF DV F G D +LFV H + + TG+AF +
Sbjct: 349 ILRLRGLPFSAGPTDVLGFLGPECPVTGGAD--GLLFVRHPDGRPTGDAFALFACEELAQ 406
Query: 110 FALQRNRQNMGRRYVEVFRSKRQEYYKAI---ANEVSDVRGGSPHRSIPRAKSHDEGKDS 166
AL+R++ +G+RY+E+FRS E + + A +P IP + G+D
Sbjct: 407 AALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAPLLPIPFPLAGGTGRDC 466
Query: 167 AVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFANAED 224
+RLRGLP++A +DI+ F + + +H+ +N GRP+G+AF++ + E
Sbjct: 467 ------VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVER 520
Query: 225 SKAAMAK-DRMTLGSRYIELFPSSHEEMDEALSRG 258
+ AA + + + RY+E+ P S EEM L G
Sbjct: 521 ALAAAQRCHKKMMKERYVEVVPCSTEEMSRVLMGG 555
>sp|Q794E4|HNRPF_RAT Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus
GN=Hnrnpf PE=1 SV=3
Length = 415
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 32/218 (14%)
Query: 39 FMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNK 93
M P GYV V+LRGLP+ C+ DV F I D V F++ + +
Sbjct: 1 MMLGPEGGEGYV--------VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGR 52
Query: 94 FTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRS 153
+GEAF L V AL+++R++MG RY+EVF+S R E + + S
Sbjct: 53 QSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKH------------S 100
Query: 154 IPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTG 213
P + DSA + G +RLRGLPF K++I+ FF + + I + ++ +G+ TG
Sbjct: 101 GPNSA------DSA-NDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITG 153
Query: 214 EAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEM 251
EAFV+FA+ E ++ A+ K + +G RYIE+F SS EE+
Sbjct: 154 EAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEV 191
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSED--SIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+++LRGLP+S +D+ +F D + + +H +GR +GEAFVE + +D K A+
Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR ++G RYIE+F S EMD L
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA E++ AAM+K
Sbjct: 290 CVHMRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
DR + RYIELF +S
Sbjct: 348 DRANMQHRYIELFLNS 363
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 49 YVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQ 107
+ Q V +RGLP+ TE D+ FF L+ V V + + + + TGEA +
Sbjct: 281 FTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEE 340
Query: 108 VDFALQRNRQNMGRRYVEVF 127
A+ ++R NM RY+E+F
Sbjct: 341 AVAAMSKDRANMQHRYIELF 360
>sp|Q9Z2X1|HNRPF_MOUSE Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf
PE=1 SV=3
Length = 415
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 32/218 (14%)
Query: 39 FMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNK 93
M P GYV V+LRGLP+ C+ DV F I D V F++ + +
Sbjct: 1 MMLGPEGGEGYV--------VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGR 52
Query: 94 FTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRS 153
+GEAF L V AL+++R++MG RY+EVF+S R E + + S
Sbjct: 53 QSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKH------------S 100
Query: 154 IPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTG 213
P + DSA + G +RLRGLPF K++I+ FF + + I + ++ +G+ TG
Sbjct: 101 GPNSA------DSA-NDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITG 153
Query: 214 EAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEM 251
EAFV+FA+ E ++ A+ K + +G RYIE+F SS EE+
Sbjct: 154 EAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEV 191
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSED--SIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+++LRGLP+S +D+ +F D + + +H +GR +GEAFVE + +D K A+
Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR ++G RYIE+F S EMD L
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA E++ AAM+K
Sbjct: 290 CVHMRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
DR + RYIELF +S
Sbjct: 348 DRANMQHRYIELFLNS 363
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 49 YVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQ 107
+ Q V +RGLP+ TE D+ FF L+ V V + + + + TGEA +
Sbjct: 281 FTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEE 340
Query: 108 VDFALQRNRQNMGRRYVEVF 127
A+ ++R NM RY+E+F
Sbjct: 341 AVAAMSKDRANMQHRYIELF 360
>sp|Q5E9J1|HNRPF_BOVIN Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF
PE=2 SV=3
Length = 414
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 111/199 (55%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV+LRGLP+ C+ DV F I D V F++ + + +GEAF L V AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R++MG RY+EVF+S R E + + S P S D D G
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVLKH------------SGP--NSADTAND-----GF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + I + ++ +G+ TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS EE+
Sbjct: 173 KERIGHRYIEVFKSSQEEV 191
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSED--SIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+++LRGLP+S +D+ +F D + + +H +GR +GEAFVE + +D K A+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR ++G RYIE+F S EMD L
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA E++ AAM+K
Sbjct: 290 CVHMRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
DR + RYIELF +S
Sbjct: 348 DRANMQHRYIELFLNS 363
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 49 YVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQ 107
+ Q V +RGLP+ TE D+ FF L+ V V + + + + TGEA +
Sbjct: 281 FTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEE 340
Query: 108 VDFALQRNRQNMGRRYVEVF 127
A+ ++R NM RY+E+F
Sbjct: 341 AVAAMSKDRANMQHRYIELF 360
>sp|Q9H6T0|ESRP2_HUMAN Epithelial splicing regulatory protein 2 OS=Homo sapiens GN=ESRP2
PE=1 SV=1
Length = 727
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VVR RGLP+ ++ DVA FF GL++ L ++ + GEA Q D ALQR
Sbjct: 258 VVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQR 317
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +E+ K + GG+ + R S ++ ILR
Sbjct: 318 HKHHMGVRYIEVYKATGEEFVK--------IAGGT-SLEVARFLSREDQV-------ILR 361
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
LRGLPFSAG D++ F + + + DGRPTG+AF FA E ++AA+ +
Sbjct: 362 LRGLPFSAGPTDVLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALRR 421
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 422 HKGMLGKRYIELFRSTAAEVQQVLNR 447
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
++RLRGLPF DV F V +LFV H + + TG+AF + A
Sbjct: 359 ILRLRGLPFSAGPTDVLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAA 418
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAI---ANEVSDVRGGSPHRSIPRAKSHDEGKDSAV 168
L+R++ +G+RY+E+FRS E + + A+ +P IP + G+D
Sbjct: 419 LRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLAPGTGRDC-- 476
Query: 169 HTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFANAEDSK 226
+RLRGLP++A +DI+ F + + +H+ +N GRP+G+AF++ +AE +
Sbjct: 477 ----VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERAL 532
Query: 227 AAMAK-DRMTLGSRYIELFPSSHEEMDEALSRG 258
AA + + + RY+E+ P S EEM L G
Sbjct: 533 AAAQRCHKKVMKERYVEVVPCSTEEMSRVLMGG 565
>sp|Q8C5Q4|GRSF1_MOUSE G-rich sequence factor 1 OS=Mus musculus GN=Grsf1 PE=1 SV=2
Length = 479
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 110/229 (48%), Gaps = 43/229 (18%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV--HKNNKFTGEAFCVLGYPLQVDFALQRN 115
VVRLRGLP+ C E D+ +FF GL+IVD+ FV ++ + TGEA+ P + AL ++
Sbjct: 250 VVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKH 309
Query: 116 RQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP------------------------- 150
R+ +G RY+E+F S+R E + + SP
Sbjct: 310 REEIGNRYIEIFPSRRNEVRTHVGSHKGKKMTSSPPTKYITEPEVVFEEHEVNEDIRPMT 369
Query: 151 ----HRSIPRAKSHDEGKDSAVHTGIL------RLRGLPFSAGKDDIMDFFKDFVLSEDS 200
+ I K E AV G L +RGLPF A DI++FF
Sbjct: 370 AFESDKEIELPKEMSEKLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPL----KP 425
Query: 201 IHITM--NSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSS 247
+ ITM +S G+ TGEA V F ED+ AAM KDR + RYIELF +S
Sbjct: 426 VRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFLNS 474
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 34/234 (14%)
Query: 31 YGTPPSSSFMYNPPPAYGYVSQPPPFP-------VVRLRGLPFDCTEVDVAEFFHGLDIV 83
Y ++++ + PP Y P ++R +GLP+ CT DV FF I
Sbjct: 116 YSQESKTTYLEDLPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIR 175
Query: 84 DV-----LFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAI 138
+ ++++ K G+A + V AL+++R MG+RYVEV+ I
Sbjct: 176 NSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYE---------I 226
Query: 139 ANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSE 198
NE D KS + G++RLRGLP+S + DI+DFF + +
Sbjct: 227 NNEDVDAL----------MKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD 276
Query: 199 DSIHITMNSDGR-PTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEM 251
I M+ GR TGEA+V+F E + A+ K R +G+RYIE+FPS E+
Sbjct: 277 --ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEV 328
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVL--SEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++R +GLP+S +D+++FF D + SE+ IH +N DG+ G+A +E + +D + A+
Sbjct: 150 LIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKAL 209
Query: 230 AKDRMTLGSRYIELFPSSHEEMD 252
K RM +G RY+E++ ++E++D
Sbjct: 210 EKHRMYMGQRYVEVYEINNEDVD 232
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 54 PPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNN-KFTGEAFCVLGYPLQVDFAL 112
P V +RGLPF D+ FF L V + + ++ K TGEA A+
Sbjct: 397 PSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAM 456
Query: 113 QRNRQNMGRRYVEVF 127
++R ++ RY+E+F
Sbjct: 457 LKDRSHVQHRYIELF 471
>sp|Q12849|GRSF1_HUMAN G-rich sequence factor 1 OS=Homo sapiens GN=GRSF1 PE=1 SV=3
Length = 480
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 47/231 (20%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV--HKNNKFTGEAFCVLGYPLQVDFALQRN 115
VVRLRGLP+ C E D+ +FF GL+IVD+ FV ++ + TGEA+ P + AL ++
Sbjct: 251 VVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKH 310
Query: 116 RQNMGRRYVEVFRSKRQEYY--------KAIA-----------------NEVS-DVRGGS 149
R+ +G RY+E+F S+R E K IA +EV+ D++ +
Sbjct: 311 REEIGNRYIEIFPSRRNEVRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMT 370
Query: 150 PHRS-----IPRA------KSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSE 198
S +P+ ++ D G S++H + +RGLPF A DI++FF
Sbjct: 371 AFESEKEIELPKEVPEKLPEAADFGTTSSLH--FVHMRGLPFQANAQDIINFFAPL---- 424
Query: 199 DSIHITM--NSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSS 247
+ ITM +S G+ TGEA V F ED+ AAM KDR + RYIELF +S
Sbjct: 425 KPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFLNS 475
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 31 YGTPPSSSFMYNPPPAYGYVSQPPPFP-------VVRLRGLPFDCTEVDVAEFFHGLDIV 83
Y ++++ + PP Y P ++R +GLP+ CT DV FF I
Sbjct: 117 YSQESKTTYLEDLPPPPEYELAPSKLEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIR 176
Query: 84 D-----VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAI 138
+ ++++ K G+A + V AL+++R MG+RYVEV+ I
Sbjct: 177 NGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYE---------I 227
Query: 139 ANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSE 198
NE D KS V+ G++RLRGLP+S + DI+DFF + +
Sbjct: 228 NNEDVDAL----------MKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVD 277
Query: 199 DSIHITMNSDGR-PTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEM 251
I M+ GR TGEA+V+F E + A+ K R +G+RYIE+FPS E+
Sbjct: 278 --ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEV 329
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVL--SEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++R +GLP+S +D+++FF D + E+ IH +N DG+ G+A +E + +D + A+
Sbjct: 151 LIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKAL 210
Query: 230 AKDRMTLGSRYIELFPSSHEEMD 252
K RM +G RY+E++ ++E++D
Sbjct: 211 EKHRMYMGQRYVEVYEINNEDVD 233
>sp|Q5ZLR4|ESRP2_CHICK Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2
PE=2 SV=1
Length = 701
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
V+R RGLP+ ++ D+A FF GL+I L ++ + GEA Q D AL+R
Sbjct: 227 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALER 286
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +E+ K + GG+ + + K++ V I+R
Sbjct: 287 HKHHMGSRYIEVYKATGEEFLK--------IAGGTSNEV-----AQFLSKENQV---IIR 330
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A ++D++ F ++ + DGRPTG+AFV F+ E ++ A+ K
Sbjct: 331 MRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKK 390
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 391 HKEILGKRYIELFRSTAAEVQQVLNR 416
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
++R+RGLPF T+ DV F V +LFV + + + TG+AF + A
Sbjct: 328 IIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNA 387
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTG 171
L+++++ +G+RY+E+FRS E + + +S + I +
Sbjct: 388 LKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRD 447
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFANAEDS-KAA 228
+RLRGLP++AG DDI+DF D + +H+ +N GRP+G+AF++ +A+ + A
Sbjct: 448 CVRLRGLPYTAGIDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVA 507
Query: 229 MAKDRMTLGSRYIELFPSSHEEMDEALSRG 258
+ + RY+E+F S EEM+ L G
Sbjct: 508 QKCHKKMMKDRYVEVFQCSGEEMNFVLMGG 537
>sp|Q3US41|ESRP1_MOUSE Epithelial splicing regulatory protein 1 OS=Mus musculus GN=Esrp1
PE=2 SV=2
Length = 680
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VVR RGLP+ ++ D+A FF GL+I L ++ + GEA D ALQR
Sbjct: 225 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 284
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +++ K + GG+ + + K++ V I+R
Sbjct: 285 HKHHMGTRYIEVYKATGEDFLK--------IAGGTSNEV-----AQFLSKENQV---IVR 328
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A ++++ FF ++ I DGRPTG+AFV FA E ++ A+ K
Sbjct: 329 MRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRK 388
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 389 HKELLGKRYIELFRSTAAEVQQVLNR 414
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 30/220 (13%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
+VR+RGLPF T +V FF + +LFV + + + TG+AF + A
Sbjct: 326 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 385
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGS----------PHRSIPRAKSHD 161
L+++++ +G+RY+E+FRS E + + N S P + +P D
Sbjct: 386 LRKHKELLGKRYIELFRSTAAEV-QQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRD 444
Query: 162 EGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEF 219
+RLRGLP++A +DI+DF +F + +H+ +N GRP+G+AF++
Sbjct: 445 ----------CIRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQM 494
Query: 220 ANAEDS-KAAMAKDRMTLGSRYIELFPSSHEEMDEALSRG 258
+ + + AA + T+ RY+E+F S EEM+ L G
Sbjct: 495 KSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMNFVLMGG 534
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 58 VVRLRGLPFDCTEVDVAEFF---------HGLDIVDVLFVHKNNKFTGEAFCVLGYPLQV 108
+RLRGLP+ T D+ +F HG+ +V ++ + +G+AF + +
Sbjct: 445 CIRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMV----LNHQGRPSGDAFIQMKSTDRA 500
Query: 109 DFALQR-NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP 150
A Q+ +++ M RYVEVF+ +E + + G SP
Sbjct: 501 FMAAQKYHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSP 543
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 29 SFYGTPPSS--SFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLD-IVDV 85
++Y +PP S S Y P A P P VVR++GL ++ ++ FF G +
Sbjct: 602 AYYPSPPGSPNSLGYFPTAANLSSVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYATED 661
Query: 86 LFVHKNNK---FTGEAFCV 101
VH N++ E C+
Sbjct: 662 GLVHTNDQARTLPKEWVCI 680
>sp|B2RYD2|ESRP1_RAT Epithelial splicing regulatory protein 1 OS=Rattus norvegicus
GN=Esrp1 PE=2 SV=2
Length = 677
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VVR RGLP+ ++ D+A FF GL+I L ++ + GEA D ALQR
Sbjct: 226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 285
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +++ K + GG+ + + K++ V I+R
Sbjct: 286 HKHHMGTRYIEVYKATGEDFLK--------IAGGTSNEV-----AQFLSKENQV---IVR 329
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A ++++ FF ++ I DGRPTG+AFV FA E ++ A+ K
Sbjct: 330 MRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRK 389
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 390 HKDLLGKRYIELFRSTAAEVQQVLNR 415
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 28/219 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
+VR+RGLPF T +V FF + +LFV + + + TG+AF + A
Sbjct: 327 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 386
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKA---------IANEVSDVRGGSPHRSIPRAKSHDE 162
L++++ +G+RY+E+FRS E + I + + P + +P D
Sbjct: 387 LRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTAPIIPVLPQQFVPPTNVRD- 445
Query: 163 GKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFA 220
+RLRGLP++A +DI+DF +F + +H+ +N GRP+G+AF++
Sbjct: 446 ---------CVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMK 496
Query: 221 NAEDS-KAAMAKDRMTLGSRYIELFPSSHEEMDEALSRG 258
+ + + AA + T+ RY+E+F S EEM+ L G
Sbjct: 497 STDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMNFVLMGG 535
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 29 SFYGTPPSS--SFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLD-IVDV 85
++Y +PP S S Y P A P P VVR++GL ++ ++ FF G +
Sbjct: 599 AYYPSPPGSPNSLGYFPTAANLSSVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYATED 658
Query: 86 LFVHKNNK 93
VH N++
Sbjct: 659 GLVHANDQ 666
>sp|Q6NXG1|ESRP1_HUMAN Epithelial splicing regulatory protein 1 OS=Homo sapiens GN=ESRP1
PE=1 SV=2
Length = 681
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VVR RGLP+ ++ D+A FF GL+I L ++ + GEA D ALQR
Sbjct: 226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 285
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +++ K + GG+ + + K++ V I+R
Sbjct: 286 HKHHMGTRYIEVYKATGEDFLK--------IAGGTSNEV-----AQFLSKENQV---IVR 329
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A ++++ FF ++ I DGRPTG+AFV FA E ++ A+ K
Sbjct: 330 MRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRK 389
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 390 HKDLLGKRYIELFRSTAAEVQQVLNR 415
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 30/220 (13%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
+VR+RGLPF T +V FF + +LFV + + + TG+AF + A
Sbjct: 327 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 386
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGS----------PHRSIPRAKSHD 161
L++++ +G+RY+E+FRS E + + N S P + +P D
Sbjct: 387 LRKHKDLLGKRYIELFRSTAAEV-QQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRD 445
Query: 162 EGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEF 219
+RLRGLP++A +DI+DF +F + +H+ +N GRP+G+AF++
Sbjct: 446 ----------CIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQM 495
Query: 220 ANAEDS-KAAMAKDRMTLGSRYIELFPSSHEEMDEALSRG 258
+A+ + AA + + RY+E+F S EEM+ L G
Sbjct: 496 KSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVLMGG 535
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 58 VVRLRGLPFDCTEVDVAEFF---------HGLDIVDVLFVHKNNKFTGEAFCVLGYPLQV 108
+RLRGLP+ T D+ +F HG+ +V ++ + +G+AF + +
Sbjct: 446 CIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMV----LNHQGRPSGDAFIQMKSADRA 501
Query: 109 DFALQR-NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP 150
A Q+ +++NM RYVEVF+ +E + + G SP
Sbjct: 502 FMAAQKCHKKNMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSP 544
>sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens
GN=HNRNPH1 PE=1 SV=4
Length = 449
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + + F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + SP D+A + G
Sbjct: 72 KKDRETMGHRYVEVFKSNNVEMDWVLKHTGPN----SP--------------DTA-NDGF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + I + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S D++ FF D + + I +GRP+GEAFVE + ++ K A+
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S++ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNNVEMDWVL 97
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAM+K
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ V V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|O35737|HNRH1_MOUSE Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus
GN=Hnrnph1 PE=1 SV=3
Length = 449
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + + F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + SP D+A + G
Sbjct: 72 KKDRETMGHRYVEVFKSNNVEMDWVLKHTGPN----SP--------------DTA-NDGF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + I + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S D++ FF D + + I +GRP+GEAFVE + ++ K A+
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S++ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNNVEMDWVL 97
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAM+K
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ V V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|Q6AY09|HNRH2_RAT Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus
GN=Hnrnph2 PE=1 SV=1
Length = 449
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + V F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + S D D G
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVLKHTGPN--------------SPDTAND-----GF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + + + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S +++M FF D + + + +GRP+GEAFVE + ++ K A+
Sbjct: 12 VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S+ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVL 97
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAMAK
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ + V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|P70333|HNRH2_MOUSE Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus
GN=Hnrnph2 PE=1 SV=1
Length = 449
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + V F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + S D D G
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVLKHTGPN--------------SPDTAND-----GF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + + + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S +++M FF D + + + +GRP+GEAFVE + ++ K A+
Sbjct: 12 VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S+ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVL 97
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAMAK
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ + V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|Q6DEZ7|ESRP1_XENTR Epithelial splicing regulatory protein 1 OS=Xenopus tropicalis
GN=esrp1 PE=2 SV=1
Length = 687
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
++R RGLP+ ++ D+A FF GL+I L ++ + GEA D ALQR
Sbjct: 227 IIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 286
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +++ K + GG+ + + K++ V I+R
Sbjct: 287 HKHHMGNRYIEVYKATGEDFLK--------IAGGTSNEV-----AQFLSKENQV---IVR 330
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A ++++ FF ++ I D RPTG+AFV FA E ++ A+ K
Sbjct: 331 MRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKK 390
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 391 HKELLGKRYIELFRSTAAEVQQVLNR 416
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 30/220 (13%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
+VR+RGLPF T +V FF V +LFV + +N+ TG+AF + A
Sbjct: 328 IVRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNA 387
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGS----------PHRSIPRAKSHD 161
L+++++ +G+RY+E+FRS E + + N S P IP D
Sbjct: 388 LKKHKELLGKRYIELFRSTAAEV-QQVLNRYSSAPLIPLPTPPIIPVLPQPFIPPVNVRD 446
Query: 162 EGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEF 219
+RLRGLP++A +DI++F +F + +H+ +N GRP+G++F++
Sbjct: 447 ----------CIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQM 496
Query: 220 ANAEDSKAAMAK-DRMTLGSRYIELFPSSHEEMDEALSRG 258
+A+ + A K + T+ RY+E+F S EEM+ L G
Sbjct: 497 KSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGG 536
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 54 PPFPV---VRLRGLPFDCTEVDVAEFF---------HGLDIVDVLFVHKNNKFTGEAFCV 101
PP V +RLRGLP+ T D+ EF HG+ +V ++ + +G++F
Sbjct: 440 PPVNVRDCIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMV----LNHQGRPSGDSFIQ 495
Query: 102 LGYPLQVDFALQR-NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP 150
+ + A Q+ +++ M RYVEVF+ +E + + G SP
Sbjct: 496 MKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSP 545
>sp|Q5RD26|HNRH2_PONAB Heterogeneous nuclear ribonucleoprotein H2 OS=Pongo abelii
GN=HNRNPH2 PE=2 SV=1
Length = 449
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + + F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + S D D G
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVLKHTGPN--------------SPDTAND-----GF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + + + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S D++M FF D + + I +GRP+GEAFVE + E+ K A+
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S+ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVL 97
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAMAK
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ + V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|P55795|HNRH2_HUMAN Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens
GN=HNRNPH2 PE=1 SV=1
Length = 449
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + + F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + S D D G
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVLKHTGPN--------------SPDTAND-----GF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + + + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S D++M FF D + + I +GRP+GEAFVE + E+ K A+
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S+ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVL 97
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAMAK
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ + V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|Q7ZY29|ESRP1_XENLA Epithelial splicing regulatory protein 1 OS=Xenopus laevis GN=esrp1
PE=2 SV=1
Length = 688
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
++R RGLP+ ++ D+A FF GL+I L ++ + GEA D ALQR
Sbjct: 227 IIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 286
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +++ K + GG+ + + K++ V I+R
Sbjct: 287 HKHHMGNRYIEVYKATGEDFLK--------IAGGTSNEV-----AQFLSKENQV---IVR 330
Query: 175 LRGLPFSAGKDDIMDFFKD---FVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A ++++ FF ++ I D RPTG+AFV FA E ++ A+ K
Sbjct: 331 MRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKK 390
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 391 HKELLGKRYIELFRSTAAEVQQVLNR 416
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 30/220 (13%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
+VR+RGLPF T +V FF V +LFV + +N+ TG+AF + A
Sbjct: 328 IVRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNA 387
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGS----------PHRSIPRAKSHD 161
L+++++ +G+RY+E+FRS E + + N S P IP D
Sbjct: 388 LKKHKELLGKRYIELFRSTAAEV-QQVLNRYSSAPLIPLPTPPIIPVLPQPFIPPVNVRD 446
Query: 162 EGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEF 219
+RLRGLP++A +DI++F +F + +H+ +N GRP+G++F++
Sbjct: 447 ----------CIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQM 496
Query: 220 ANAEDSKAAMAK-DRMTLGSRYIELFPSSHEEMDEALSRG 258
+A+ + A K + T+ RY+E+F S EEM+ L G
Sbjct: 497 KSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGG 536
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 54 PPFPV---VRLRGLPFDCTEVDVAEFF---------HGLDIVDVLFVHKNNKFTGEAFCV 101
PP V +RLRGLP+ T D+ EF HG+ +V ++ + +G++F
Sbjct: 440 PPVNVRDCIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMV----LNHQGRPSGDSFIQ 495
Query: 102 LGYPLQVDFALQR-NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP 150
+ + A Q+ +++ M RYVEVF+ +E + + G SP
Sbjct: 496 MKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSP 545
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3
Length = 992
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 113/212 (53%), Gaps = 18/212 (8%)
Query: 59 VRLRGLPFDCTEVDVAEFFHGL--DIVDVL--FVHKNNKFTGEAFCVLGYPLQVDFALQR 114
V + G+PF E DV EFFHGL D V +L V +NN G P AL+R
Sbjct: 306 VSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNN---GNGLVKFLSPQDTFEALKR 362
Query: 115 NRQNMGRRYVEVFRSKRQEYYKA---IANEVSDVRGGSPH---RSIPRAKSHDEGKDS-- 166
NR M +RYVEV + +++ A I + S G H +++PR+KS K S
Sbjct: 363 NRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRSRS 422
Query: 167 -AVHTG--ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAE 223
+ H + L+GLPF A ++DFFK + EDSI+I +G+ TGE FVEF N
Sbjct: 423 RSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDA 482
Query: 224 DSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
D KAA+ + + +G+R+I++ P + + M E +
Sbjct: 483 DYKAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIV-DVLFVH--KNNKFTGEAFCVLGYPLQVDFALQR 114
V L+GLPF+ V +FF LDIV D +++ N K TGE F AL R
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCR 490
Query: 115 NRQNMGRRYVEVFRSKRQEYY-------KAIANEVSDVRGGSPHRSIPRAKSHDEGKDSA 167
++Q MG R+++V ++ K + N D R + EG+ S+
Sbjct: 491 HKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQR---------ELVLNPEGEVSS 541
Query: 168 VHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKA 227
+ +PFS K D++ F + + E ++H+ ++++G+ G+A V+F +D+
Sbjct: 542 AKV-CAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHK 600
Query: 228 AMAKDRMTLGSRYIELFPSSHEEMDE 253
+ R L R + + E+M E
Sbjct: 601 SEHLHRKKLNGREAFVHIVTLEDMRE 626
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL+GLP AG DI FF + + +HI G GEAF+ FA ED++ M +
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
T+ + L SS EM + R
Sbjct: 60 TGGTIKGSKVTLLLSSKTEMQNMIELSR 87
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA- 230
I++++ +PF+ D+I+DFF + + S+ + N G PTGEA V F + +++ AA+
Sbjct: 917 IIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 976
Query: 231 -KDRMTLGSRYIEL 243
DR +GSR ++L
Sbjct: 977 LNDR-PIGSRKVKL 989
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL+GLP +D+ FF GL I D VH GEAF V + R
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDG-GVHIVGGELGEAFIVFATDEDARLGMMRTGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEG 163
+ V + S + E I E+S R + + IP A + G
Sbjct: 63 TIKGSKVTLLLSSKTEMQNMI--ELSRRRFETANLDIPPANASRSG 106
>sp|Q3SZF3|HNRH2_BOVIN Heterogeneous nuclear ribonucleoprotein H2 OS=Bos taurus GN=HNRNPH2
PE=2 SV=1
Length = 449
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + + F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + S D D G
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVLKHTGPN--------------SPDTAND-----GF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF K++I+ FF + + + + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S D++M FF D + + I +GRP+GEAFVE + ++ K A+
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S+ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVL 97
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI + DGR TGEA VEFA ED+ AAMAK
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ + V + + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|Q8VHV7|HNRH1_RAT Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus
GN=Hnrnph1 PE=1 SV=2
Length = 449
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 24/199 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFAL 112
VV++RGLP+ C+ +V FF I + + F++ + + +GEAF L +V AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 113 QRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGI 172
+++R+ MG RYVEVF+S E + + + SP D+A + G
Sbjct: 72 KKDRETMGHRYVEVFKSNNVEMDWVLKHTGPN----SP--------------DTA-NDGF 112
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+RLRGLPF +++I+ FF + + I + ++ GR TGEAFV+FA+ E ++ A+ K
Sbjct: 113 VRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Query: 233 RMTLGSRYIELFPSSHEEM 251
+ +G RYIE+F SS E+
Sbjct: 173 KERIGHRYIEIFKSSRAEV 191
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDS--IHITMNSDGRPTGEAFVEFANAEDSKAAM 229
++++RGLP+S D++ FF D + + I +GRP+GEAFVE + ++ K A+
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEAL 255
KDR T+G RY+E+F S++ EMD L
Sbjct: 72 KKDRETMGHRYVEVFKSNNVEMDWVL 97
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+ +RGLP+ A ++DI +FF L+ +HI DGR TGEA VEFA ED+ AAM+K
Sbjct: 290 CVHMRGLPYRATENDIYNFFSP--LNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSK 347
Query: 232 DRMTLGSRYIELFPSS 247
D+ + RY+ELF +S
Sbjct: 348 DKANMQHRYVELFLNS 363
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V +RGLP+ TE D+ FF L+ V V + + + TGEA A+ +++
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSKDK 349
Query: 117 QNMGRRYVEVF 127
NM RYVE+F
Sbjct: 350 ANMQHRYVELF 360
>sp|Q7ZVR8|ESRP2_DANRE Epithelial splicing regulatory protein 2 OS=Danio rerio GN=esrp2
PE=2 SV=2
Length = 736
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
V+R RGLP+ ++ D+A FF GL+I L ++ + GEA D AL R
Sbjct: 225 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDR 284
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +E+ K + GG+ + ++ I+R
Sbjct: 285 HKHHMGSRYIEVYKATGEEFLK--------IAGGTSNEVAQFLSKENQM--------IIR 328
Query: 175 LRGLPFSAGKDDIMDFFKDFVLSEDS---IHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A D++ F D + DGRPTG+AFV FA E ++ A+ K
Sbjct: 329 MRGLPFTATPQDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALKK 388
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L+R
Sbjct: 389 HKQILGKRYIELFRSTAAEVQQVLNR 414
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 58 VVRLRGLPFDCTEVDVAEFFH-GLDIVD----VLFV-HKNNKFTGEAFCVLGYPLQVDFA 111
++R+RGLPF T DV F + D +LFV + + + TG+AF + A
Sbjct: 326 IIRMRGLPFTATPQDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNA 385
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSD-VRGGSPHRSIPRAKSHDEGKDSAVHT 170
L++++Q +G+RY+E+FRS E + + +S + P P + T
Sbjct: 386 LKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPPPPPPMVSVPVLATPPFITT 445
Query: 171 G----ILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFANAED 224
G +RLRGLP++A +DI++F + + +H+ +N GRP+G+AF++ +A+
Sbjct: 446 GNTRDCIRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADR 505
Query: 225 S-KAAMAKDRMTLGSRYIELFPSSHEEMDEALSRG 258
+ A + + RY+E+F S EEM L G
Sbjct: 506 AFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVLMGG 540
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 157 AKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAF 216
A S E DS ++R RGLP+ + DI FFK +++ + + +N+ GR GEA
Sbjct: 213 ACSKTEAVDSET---VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEAL 269
Query: 217 VEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEE 250
V F N+E A+ + + +GSRYIE++ ++ EE
Sbjct: 270 VRFINSEHRDMALDRHKHHMGSRYIEVYKATGEE 303
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%)
Query: 171 GILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA 230
++R++GLP++AG DI+ FF+ + L DS+ + N G+ +GEA V F + + ++ A+A
Sbjct: 659 ALVRMQGLPYNAGVKDILSFFQGYQLQADSVLVLYNWSGQRSGEALVTFPSEKAARRAVA 718
Query: 231 K 231
+
Sbjct: 719 E 719
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 58 VVRLRGLPFDCTEVDVAEFF--HGLDIVDV---LFVHKNNKFTGEAFCVLGYPLQVDFAL 112
+RLRGLP+ D+ EF H +DI + +++ + +G+AF + +
Sbjct: 451 CIRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVA 510
Query: 113 QRNRQNMGR-RYVEVFRSKRQEYYKAIANEVSDVRGGSP 150
Q+ + M + RYVEVF+ +E + + G SP
Sbjct: 511 QKCHKKMMKDRYVEVFQCSTEEMSFVLMGGTLNRSGLSP 549
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 29 SFYGTPPSS---SFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGL----D 81
S++ PP S + P PA + P P +VR++GLP++ D+ FF G D
Sbjct: 631 SYFAAPPGSVAAAVAAQPTPA---ILPPQPGALVRMQGLPYNAGVKDILSFFQGYQLQAD 687
Query: 82 IVDVLFVHKNNKFTGEAF 99
V VL+ + + + +GEA
Sbjct: 688 SVLVLY-NWSGQRSGEAL 704
>sp|Q8SQ27|RBM12_MACMU RNA-binding protein 12 OS=Macaca mulatta GN=RBM12 PE=2 SV=1
Length = 932
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 24/222 (10%)
Query: 55 PFPV------VRLRGLPFDCTEVDVAEFFHGL--DIVDVL--FVHKNNKFTGEAFCVLGY 104
P P+ V + G+PF E DV +FFHGL D V +L V +NN G
Sbjct: 296 PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNN---GNGLVKFLS 352
Query: 105 PLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIA------NEVSDVRGGSPHRSIPRAK 158
P AL+RNR M +RYVEV + +++ A N + P +++PR+K
Sbjct: 353 PQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQSHPPPQTLPRSK 412
Query: 159 SHDEGKDS---AVHTG--ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTG 213
S K S + H + L+GLPF A ++DFFK + EDSI+I +G+ TG
Sbjct: 413 SPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATG 472
Query: 214 EAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
E FVEF N D KAA+ + + +G+R+I++ P + + M E +
Sbjct: 473 EGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIV-DVLFVH--KNNKFTGEAFCVLGYPLQVDFALQR 114
V L+GLPF+ V +FF LDIV D +++ N K TGE F AL R
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCR 490
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKS--HDEGKDSAVHTGI 172
++Q MG R+++V + K + ++ +R + S + + + EG ++
Sbjct: 491 HKQYMGNRFIQVHPITK----KGMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSAKV-C 545
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+ +PFS K D++ F + + E+++H+ ++++G+ G+A V+F N +D++ +
Sbjct: 546 AHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
Query: 233 RMTLGSRYIELFPSSHEEMDE 253
R L R + + E+M E
Sbjct: 606 RKKLNGREAFVHVVTLEDMRE 626
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL+GLP AG DI FF + + +HI G GEAF+ FA ED++ M +
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
T+ + L SS EM + R
Sbjct: 60 TGGTIKGSKVTLLLSSKTEMQNMIELSR 87
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA- 230
+++++ +PF+ D+I+DFF + + S+ + N G PTGEA V F + +++ AA+
Sbjct: 857 VIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 916
Query: 231 -KDRMTLGSRYIEL 243
DR +GSR ++L
Sbjct: 917 LNDR-PIGSRKVKL 929
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL+GLP +D+ FF GL I D VH GEAF V + R
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDG-GVHIVGGELGEAFIVFATDEDARLGMMRTGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEG 163
+ V + S + E I E+S R + + IP A + G
Sbjct: 63 TIKGSKVTLLLSSKTEMQNMI--ELSRRRFETANLDIPPANASRSG 106
>sp|Q5RBM8|RBM12_PONAB RNA-binding protein 12 OS=Pongo abelii GN=RBM12 PE=2 SV=1
Length = 932
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 24/222 (10%)
Query: 55 PFPV------VRLRGLPFDCTEVDVAEFFHGL--DIVDVL--FVHKNNKFTGEAFCVLGY 104
P P+ V + G+PF E DV +FFHGL D V +L V +NN G
Sbjct: 296 PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNN---GNGLVKFLS 352
Query: 105 PLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGS------PHRSIPRAK 158
P AL+RNR M +RYVEV + +++ A + G P +++PR+K
Sbjct: 353 PQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSK 412
Query: 159 SHDEGKDS---AVHTG--ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTG 213
S K S + H + L+GLPF A ++DFFK + EDSI+I +G+ TG
Sbjct: 413 SPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATG 472
Query: 214 EAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
E FVEF N D KAA+ + + +G+R+I++ P + + M E +
Sbjct: 473 EGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIV-DVLFVH--KNNKFTGEAFCVLGYPLQVDFALQR 114
V L+GLPF+ V +FF LDIV D +++ N K TGE F AL R
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCR 490
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKS--HDEGKDSAVHTGI 172
++Q MG R+++V + K + ++ +R + S + + + EG ++
Sbjct: 491 HKQYMGNRFIQVHPITK----KGMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSAKV-C 545
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+ +PFS K D++ F + + E+++H+ ++++G+ G+A V+F N +D++ +
Sbjct: 546 AHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
Query: 233 RMTLGSRYIELFPSSHEEMDE 253
R L R + + E+M E
Sbjct: 606 RKKLNGREAFVHVVTLEDMRE 626
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL+GLP AG DI FF + + +HI G GEAF+ FA ED++ M +
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
T+ + L SS EM + R
Sbjct: 60 TGGTIKGSKVTLLLSSKTEMQNMIELSR 87
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA- 230
+++++ +PF+ D+I+DFF + + S+ + N G PTGEA V F + +++ AA+
Sbjct: 859 VIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 918
Query: 231 -KDRMTLGSRYIELF 244
DR +GSR + L+
Sbjct: 919 LNDR-PIGSRKVNLY 932
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL+GLP +D+ FF GL I D VH GEAF V + R
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDG-GVHIVGGELGEAFIVFATDEDARLGMMRTGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEG 163
+ V + S + E I E+S R + + IP A + G
Sbjct: 63 TIKGSKVTLLLSSKTEMQNMI--ELSRRRFETANLDIPPANASRSG 106
>sp|A1L1G1|ESRP1_DANRE Epithelial splicing regulatory protein 1 OS=Danio rerio GN=esrp1
PE=2 SV=1
Length = 714
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 22/206 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
V+R RGLP+ ++ D+A FF GL+I L ++ + GEA D ALQR
Sbjct: 226 VIRARGLPWQSSDQDIARFFRGLNIAKGGAALCLNAQGRRNGEALVRFESEEHRDLALQR 285
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ +MG RY+EV+++ +++ K + GG+ + ++ I+R
Sbjct: 286 HKHHMGGRYIEVYKATGEDFLK--------IAGGTSNEVASFLSRENQI--------IVR 329
Query: 175 LRGLPFSAGKDDIMDFFKDFVLSEDS---IHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
+RGLPF+A + ++ FF D I DGRPTG+AFV F+ E ++ A+ K
Sbjct: 330 MRGLPFNATAEQVLQFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNALKK 389
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSR 257
+ LG RYIELF S+ E+ + L++
Sbjct: 390 HKDMLGKRYIELFKSTAAEVQQVLNK 415
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 25/220 (11%)
Query: 58 VVRLRGLPFDCTEVDVAEFFH-GLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFA 111
+VR+RGLPF+ T V +FF + D +LFV + + TG+AF + A
Sbjct: 327 IVRMRGLPFNATAEQVLQFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNA 386
Query: 112 LQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSD----------VRGGSPHRSIPRAKSHD 161
L++++ +G+RY+E+F+S E + + S + +P +P+ +
Sbjct: 387 LKKHKDMLGKRYIELFKSTAAEVQQVLNKYSSAPLIPVAPSPILSVVAPPTFVPQTAAVP 446
Query: 162 EGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEF 219
+D +RLRGLP+ A DI+ F ++ + +H+ +N GRP+GEAF++
Sbjct: 447 GVRDC------VRLRGLPYDASIQDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQM 500
Query: 220 ANAEDS-KAAMAKDRMTLGSRYIELFPSSHEEMDEALSRG 258
+AE + AA + ++ RY+E+F S +E++ L G
Sbjct: 501 RSAERAFLAAQRCHKRSMKERYVEVFACSAQEVNIVLMGG 540
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 14 REMGAKRQRLIDQGPSFYGTP--PSSSFMYNPPPAYGYVSQPPPFP----VVRLRGLPFD 67
+ A+ Q+++++ S P PS PP + V Q P VRLRGLP+D
Sbjct: 403 KSTAAEVQQVLNKYSSAPLIPVAPSPILSVVAPPTF--VPQTAAVPGVRDCVRLRGLPYD 460
Query: 68 CTEVDVAEFF--HGLDI----VDVLFVHKNNKFTGEAFCVLGYPLQVDFALQR-NRQNMG 120
+ D+ F +G DI V ++ H+ +GEAF + + A QR ++++M
Sbjct: 461 ASIQDILVFLGEYGADIKTHGVHMVLNHQGRP-SGEAFIQMRSAERAFLAAQRCHKRSMK 519
Query: 121 RRYVEVFRSKRQE 133
RYVEVF QE
Sbjct: 520 ERYVEVFACSAQE 532
>sp|Q9NTZ6|RBM12_HUMAN RNA-binding protein 12 OS=Homo sapiens GN=RBM12 PE=1 SV=1
Length = 932
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 24/222 (10%)
Query: 55 PFPV------VRLRGLPFDCTEVDVAEFFHGL--DIVDVL--FVHKNNKFTGEAFCVLGY 104
P P+ V + G+PF E DV +FFHGL D V +L V +NN G
Sbjct: 296 PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNN---GNGLVKFLS 352
Query: 105 PLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGS------PHRSIPRAK 158
P AL+RNR M +RYVEV + +++ A + G P +++PR+K
Sbjct: 353 PQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSK 412
Query: 159 SHDEGKDS---AVHTG--ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTG 213
S K S + H + L+GLPF A ++DFFK + EDSI+I +G+ TG
Sbjct: 413 SPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATG 472
Query: 214 EAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEAL 255
E FVEF N D KAA+ + + +G+R+I++ P + + M E +
Sbjct: 473 EGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKI 514
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIV-DVLFVH--KNNKFTGEAFCVLGYPLQVDFALQR 114
V L+GLPF+ V +FF LDIV D +++ N K TGE F AL R
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCR 490
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKS--HDEGKDSAVHTGI 172
++Q MG R+++V + K + ++ +R + S + + + EG ++
Sbjct: 491 HKQYMGNRFIQVHPITK----KGMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSAKV-C 545
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKD 232
+ +PFS K D++ F + + E+++H+ ++++G+ G+A V+F N +D++ +
Sbjct: 546 AHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
Query: 233 RMTLGSRYIELFPSSHEEMDE 253
R L R + + E+M E
Sbjct: 606 RKKLNGREAFVHVVTLEDMRE 626
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL+GLP AG DI FF + + +HI G GEAF+ FA ED++ M +
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
T+ + L SS EM + R
Sbjct: 60 TGGTIKGSKVTLLLSSKTEMQNMIELSR 87
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA- 230
+++++ +PF+ D+I+DFF + + S+ + N G PTGEA V F + +++ AA+
Sbjct: 857 VIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 916
Query: 231 -KDRMTLGSRYIEL 243
DR +GSR ++L
Sbjct: 917 LNDR-PIGSRKVKL 929
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL+GLP +D+ FF GL I D VH GEAF V + R
Sbjct: 4 VIRLQGLPIVAGTMDIRHFFSGLTIPDG-GVHIVGGELGEAFIVFATDEDARLGMMRTGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEG 163
+ V + S + E I E+S R + + IP A + G
Sbjct: 63 TIKGSKVTLLLSSKTEMQNMI--ELSRRRFETANLDIPPANASRSG 106
>sp|Q22708|SYM2_CAEEL RNA-binding protein sym-2 OS=Caenorhabditis elegans GN=sym-2 PE=2
SV=3
Length = 618
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 104/203 (51%), Gaps = 21/203 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
V R RGLP+ ++ VA+FF GLDIV L + + GE D AL+R
Sbjct: 182 VCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFSSQESRDLALKR 241
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
+R + RY+EV YKA +E V GS S + + + + I+R
Sbjct: 242 HRNFLLSRYIEV--------YKAGLDEFMHVATGS---------STEAMEFVSANAIIVR 284
Query: 175 LRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRM 234
+RGLP+ I FF+ L++ + IT +DGRPTG+AFV+F ED++ + K R
Sbjct: 285 MRGLPYDCTDAQIRTFFEPLKLTDKILFIT-RTDGRPTGDAFVQFETEEDAQQGLLKHRQ 343
Query: 235 TLGSRYIELFPSSHEEMDEALSR 257
+G RYIELF S+ E+ + + R
Sbjct: 344 VIGQRYIELFKSTAAEVQQVVKR 366
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 17/204 (8%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-VLFVHKNN-KFTGEAFCVLGYPLQVDFALQRN 115
+VR+RGLP+DCT+ + FF L + D +LF+ + + + TG+AF L ++
Sbjct: 282 IVRMRGLPYDCTDAQIRTFFEPLKLTDKILFITRTDGRPTGDAFVQFETEEDAQQGLLKH 341
Query: 116 RQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRL 175
RQ +G+RY+E+F+S E + + ++ SP + ++ KD +RL
Sbjct: 342 RQVIGQRYIELFKSTAAEVQQVVKR--CNLINSSPAVANAVEAPEEKKKDC------VRL 393
Query: 176 RGLPFSAGKDDIMDFFKDF--VLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA--- 230
RGLP+ A I+ F DF ++ +H+ N+ G P+GEAF++ N + + A A
Sbjct: 394 RGLPYEATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVH 453
Query: 231 KDRMTLG--SRYIELFPSSHEEMD 252
+ M++G RYIE+F +S EE++
Sbjct: 454 NNFMSVGKKKRYIEVFQASAEELN 477
>sp|Q9BJZ5|FUSIL_DROME RNA-binding protein fusilli OS=Drosophila melanogaster GN=fus PE=2
SV=1
Length = 967
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
+VR RGLP+ ++ D+A+FF GL++ L + + GEA D AL+R
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALKR 339
Query: 115 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILR 174
++ ++G RY+EV+R+ +++ AIA GG A + + S I+R
Sbjct: 340 HKHHIGTRYIEVYRASGEDFL-AIA-------GG--------ASNEAQAFLSKGAQVIIR 383
Query: 175 LRGLPFSAGKDDIMDFFKD------FVL-SEDSIHITMNSDGRPTGEAFVEFANAEDSKA 227
+RGLP+ A ++DFF VL + + DGR TG+AFV FAN D+
Sbjct: 384 MRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPK 443
Query: 228 AMAKDRMTLGSRYIELFPSSHEEMDEALSR 257
A+ + R ++G RYIELF S+ E+ + L+R
Sbjct: 444 ALGRHRESIGQRYIELFRSTTAEVQQVLNR 473
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 61/261 (23%)
Query: 58 VVRLRGLPFDCTEVDVAEFF--------HGLDIVD-VLFVHK-NNKFTGEAFCVLGYPLQ 107
++R+RGLP+D T V +FF H LD + VLFV K + + TG+AF +
Sbjct: 381 IIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETD 440
Query: 108 VDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEV--SDVRGGSPHRSIP---------- 155
AL R+R+++G+RY+E+FRS E + + + + G H P
Sbjct: 441 APKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMDPKNYESGGGHSQPPLIAQLPTMQL 500
Query: 156 --------RAKSHDEGKD----------------------SAVHTGILRLRGLPFSAGKD 185
+ SH G S +RLRGLP+ A +
Sbjct: 501 PLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIRLRGLPYEAMVE 560
Query: 186 DIMDFFKDFV--LSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDR----MTLGS- 238
I+ F DF + +H+ +N+ G+P+GEAF++ + E+S A+ R M G
Sbjct: 561 HILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM-DLEESARLCAQRRHNHYMMFGKK 619
Query: 239 -RYIELFPSSHEEMDEALSRG 258
RYIE+F S ++M+ L+ G
Sbjct: 620 YRYIEVFQCSGDDMNMVLNGG 640
>sp|A8WPC5|SYM2_CAEBR RNA-binding protein sym-2 OS=Caenorhabditis briggsae GN=sym-2 PE=3
SV=2
Length = 634
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 114/207 (55%), Gaps = 21/207 (10%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD-VLFVHKNN-KFTGEAFCVLGYPLQVDF--ALQ 113
+VR+RGLP+DCT+ + FF L + + +LF+ + + + TG + + + D L
Sbjct: 286 IVRMRGLPYDCTDTQIRAFFEPLKLTEKILFITRTDGRPTGNCDAFVQFETEEDAQQGLL 345
Query: 114 RNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGIL 173
++RQ +G+RY+E+F+S E + + ++ +P + S ++ KD +
Sbjct: 346 KHRQVIGQRYIELFKSTAAEVQQVVKR--CNLINSAPVVANAVEVSDEKKKDC------V 397
Query: 174 RLRGLPFSAGKDDIMDFFKDF--VLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA- 230
RLRGLP+ A I++F DF ++ +H+ N+ G P+GEAF++ +E + AA A
Sbjct: 398 RLRGLPYEATVQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMI-SEQAAAATAS 456
Query: 231 ---KDRMTLG--SRYIELFPSSHEEMD 252
+ M +G RYIE+F SS EE++
Sbjct: 457 GVHNNFMCVGKKKRYIEVFQSSAEELN 483
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTG--EAFVEFANAEDSKAAM 229
I+R+RGLP+ I FF+ L+E + IT +DGRPTG +AFV+F ED++ +
Sbjct: 286 IVRMRGLPYDCTDTQIRAFFEPLKLTEKILFIT-RTDGRPTGNCDAFVQFETEEDAQQGL 344
Query: 230 AKDRMTLGSRYIELFPSSHEEMDEALSR 257
K R +G RYIELF S+ E+ + + R
Sbjct: 345 LKHRQVIGQRYIELFKSTAAEVQQVVKR 372
>sp|P31942|HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens
GN=HNRNPH3 PE=1 SV=2
Length = 346
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 171 GILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA 230
G +RLRGLPF K++I+ FF+ + + I +TM+ GR TGEAFV+FA+ E ++ A+
Sbjct: 16 GTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALG 75
Query: 231 KDRMTLGSRYIELFPSSHEEM 251
K + +G RYIE+F SS E+
Sbjct: 76 KHKERIGHRYIEIFRSSRSEI 96
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 166 SAVHTG-ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAED 224
S H G + +RGLPF A ++DI +FF L+ +HI + +DGR TGEA VEF ED
Sbjct: 189 SGFHGGHFVHMRGLPFRATENDIANFFSP--LNPIRVHIDIGADGRATGEADVEFVTHED 246
Query: 225 SKAAMAKDRMTLGSRYIELFPSS 247
+ AAM+KD+ + RYIELF +S
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNS 269
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQR 114
VRLRGLPF C++ ++ +FF GL+IV L + + TGEAF + AL +
Sbjct: 17 TVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGK 76
Query: 115 NRQNMGRRYVEVFRSKRQE 133
+++ +G RY+E+FRS R E
Sbjct: 77 HKERIGHRYIEIFRSSRSE 95
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 59 VRLRGLPFDCTEVDVAEFFHGLDIVDV-LFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V +RGLPF TE D+A FF L+ + V + + + + TGEA A+ +++
Sbjct: 197 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 118 NMGRRYVEVF 127
NM RY+E+F
Sbjct: 257 NMQHRYIELF 266
>sp|Q8R3C6|RBM19_MOUSE Probable RNA-binding protein 19 OS=Mus musculus GN=Rbm19 PE=1 SV=1
Length = 952
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 40 MYNPPPAYGYVSQP-----PPFP-VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV---HK 90
+ P A G V +P P P V+LRG PF+ TE +V EF L V + V H
Sbjct: 270 VLRPQEAAGKVEKPVSQKEPTTPYTVKLRGAPFNVTEKNVIEFLAPLKPVAIRIVRNAHG 329
Query: 91 NNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP 150
N TG F L +V AL+ NR MG RY+EVFR K+ + G P
Sbjct: 330 NK--TGYVFVDLSSEEEVKKALKCNRDYMGGRYIEVFREKQAPTAR-----------GPP 376
Query: 151 HRSIP---RAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDF-VLSEDSIHITMN 206
+ P R +E ++ +G L +R L +++ ++D+ F + LSE +H ++
Sbjct: 377 KSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSE--LHYPID 434
Query: 207 S-DGRPTGEAFVEFANAEDSKAAMAK-DRMTLGSRYIELFPSS 247
S +P G AFV F E + A A+ D R + + PS+
Sbjct: 435 SLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 477
>sp|Q80YR9|R12BA_MOUSE RNA-binding protein 12B-A OS=Mus musculus GN=Rbm12b1 PE=1 SV=2
Length = 836
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 57 PVVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV-HKNNKFTGEAFCVLGYPLQVDFALQRN 115
P + LRGLP+ E DV FF GL + V+ + H + + G+A + L+ +
Sbjct: 154 PYLFLRGLPYLVNEDDVRVFFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCH 213
Query: 116 RQNMGRRYVEVFRSKRQEY--YKAIANEVSDV-----RGGSPHRSIP----RAKSHDEGK 164
R MG R++EV + Q++ + A E D SP R I R +SH +
Sbjct: 214 RSFMGSRFIEVMQGSEQQWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSP 273
Query: 165 DSAVHTGI---LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN 221
+ + + + L+ L + K D+ + F+D L+ D I D R T AFV F N
Sbjct: 274 RARSRSPLGFYVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKN 332
Query: 222 AEDSKAAMAKDRMTLGSRYIELFPSSHEEM 251
+D A+ + L R + + P S +EM
Sbjct: 333 QKDYNTALGLHKTVLQYRPVLIDPVSRKEM 362
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 96/234 (41%), Gaps = 41/234 (17%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL GLPF VD+ FF GL I D VH GEAF + A+ R+
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFKGLTIPDG-GVHIIGGKVGEAFIIFATDEDARRAISRSGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAI----ANEVSDVRGGSPHRSIPR------AKSHDE----- 162
+ VE+F S + E K I V R GS + A +E
Sbjct: 63 FIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRPGSGASGVGNVYHFSDALKEEESYSGY 122
Query: 163 ----GKDSAVHTG-------------------ILRLRGLPFSAGKDDIMDFFKDFVLSED 199
+D+ HT L LRGLP+ +DD+ FF + D
Sbjct: 123 GSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV--D 180
Query: 200 SIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDE 253
+ + + DGR G+A V+FA+ D+ + R +GSR+IE+ S ++ E
Sbjct: 181 GVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIE 234
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 6/200 (3%)
Query: 59 VRLRGLPFDCTEVDVAEFFHGLDIVD--VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V L+ L + + D+ F D+ + + FV+K+ + T AF + + AL ++
Sbjct: 285 VHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYKDERRTRYAFVMFKNQKDYNTALGLHK 344
Query: 117 QNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIP---RAKSHDEGKDSAVHTGIL 173
+ R V + R+E + I R S + P K EG + +
Sbjct: 345 TVLQYRPVLIDPVSRKEMVRIIEC-YEKKRPESLEKERPGRVSQKYSQEGFSGSGQKLCI 403
Query: 174 RLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDR 233
+R LPF K ++ FF DF L ED I++ + G GEA V F + E + A +R
Sbjct: 404 YIRNLPFDVTKGEVQKFFADFSLVEDDIYLLCDDKGVGLGEALVRFKSEEQAMKAERLNR 463
Query: 234 MTLGSRYIELFPSSHEEMDE 253
+ L S E+M E
Sbjct: 464 QRFLGIEVLLRLISEEQMQE 483
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL GLPF AG DI FFK + + +HI G GEAF+ FA ED++ A+++
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFKGLTIPDGGVHII----GGKVGEAFIIFATDEDARRAISR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
+ +ELF SS EM + + R
Sbjct: 60 SGGFIKDSSVELFLSSKVEMQKTIEMKR 87
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 153 SIPRAKSHDEGKDSAVHTGIL--RLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGR 210
S P AK + + V I+ ++ LPF A +I+DFF + + DS+ + N G
Sbjct: 740 SFPDAKVTSDLNLNCVSDKIIPVKISNLPFKANASEILDFFHGYKVIPDSVSLQYNEQGL 799
Query: 211 PTGEAFVEFANAEDSKAAM 229
P GEA V N ++ AA+
Sbjct: 800 PIGEAIVAMTNYNEALAAV 818
>sp|Q66JV4|R12BB_MOUSE RNA-binding protein 12B-B OS=Mus musculus GN=Rbm12b2 PE=1 SV=2
Length = 834
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 57 PVVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV-HKNNKFTGEAFCVLGYPLQVDFALQRN 115
P + LRGLP+ E DV FF GL + V+ + H + + G+A + L+ +
Sbjct: 154 PYLFLRGLPYLVNEDDVRVFFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCH 213
Query: 116 RQNMGRRYVEVFRSKRQEY--YKAIANEVSDV-----RGGSPHRSIP----RAKSHDEGK 164
R MG R++EV + Q++ + A E D SP R I R +SH +
Sbjct: 214 RSFMGSRFIEVMQGSEQQWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSP 273
Query: 165 DSAVHTGI---LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN 221
+ + + + L+ L + K D+ + F+D L+ D I D R T AFV F N
Sbjct: 274 RARSRSPLGFYVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKN 332
Query: 222 AEDSKAAMAKDRMTLGSRYIELFPSSHEEM 251
+D A+ + L R + + P S +EM
Sbjct: 333 QKDYNTALGLHKTVLQYRPVLIDPVSRKEM 362
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 96/234 (41%), Gaps = 41/234 (17%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL GLPF VD+ FF GL I D VH GEAF + A+ R+
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFKGLTIPDG-GVHIIGGKVGEAFIIFATDEDARRAISRSGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAI----ANEVSDVRGGSPHRSIPR------AKSHDE----- 162
+ VE+F S + E K I V R GS + A +E
Sbjct: 63 FIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRPGSGASGVGNVYHFSDALKEEESYSGY 122
Query: 163 ----GKDSAVHTG-------------------ILRLRGLPFSAGKDDIMDFFKDFVLSED 199
+D+ HT L LRGLP+ +DD+ FF + D
Sbjct: 123 GSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV--D 180
Query: 200 SIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDE 253
+ + + DGR G+A V+FA+ D+ + R +GSR+IE+ S ++ E
Sbjct: 181 GVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIE 234
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 6/200 (3%)
Query: 59 VRLRGLPFDCTEVDVAEFFHGLDIVD--VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V L+ L + + D+ F D+ + + FV+K+ + T AF + + AL ++
Sbjct: 285 VHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYKDERRTRYAFVMFKNQKDYNTALGLHK 344
Query: 117 QNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIP---RAKSHDEGKDSAVHTGIL 173
+ R V + R+E + I R S + P K EG + +
Sbjct: 345 TVLQYRPVLIDPVSRKEMVRIIEC-YEKKRPESLEKERPGRVSQKYSQEGFSGSGQKLCI 403
Query: 174 RLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDR 233
+R LPF K ++ FF DF L ED I++ + G GEA V F + E + A +R
Sbjct: 404 YIRNLPFDVTKGEVQKFFADFSLVEDDIYLLCDDKGVGLGEALVRFKSEEQAMKAERLNR 463
Query: 234 MTLGSRYIELFPSSHEEMDE 253
+ L S E+M E
Sbjct: 464 QRFLGIEVLLRLISEEQMQE 483
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL GLPF AG DI FFK + + +HI G GEAF+ FA ED++ A+++
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFKGLTIPDGGVHII----GGKVGEAFIIFATDEDARRAISR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
+ +ELF SS EM + + R
Sbjct: 60 SGGFIKDSSVELFLSSKVEMQKTIEMKR 87
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 171 GILR--LRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAA 228
GI+R + LPF A ++I+DFF + + DS+ I N +G P GEA V N ++ +A
Sbjct: 756 GIIRVMISNLPFKANANEILDFFHGYKVIPDSVSIQYNEEGLPLGEAIVSMTNYNEALSA 815
Query: 229 M 229
+
Sbjct: 816 V 816
>sp|Q5RFT7|RB12B_PONAB RNA-binding protein 12B OS=Pongo abelii GN=RBM12B PE=2 SV=1
Length = 761
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 97/235 (41%), Gaps = 42/235 (17%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL GLPF VD+ FF GL I D VH GEAF + A+ R+
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFTGLTIPDG-GVHIIGGEIGEAFIIFATDEDARRAISRSGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAIANEVSDVRG-----------GSPHRSIPRAKSHDE---- 162
+ VE+F S + E K I + +D G GS I K
Sbjct: 63 FIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGTSGVGSLSNIIESVKEEASNSGY 122
Query: 163 ----GKDSAVHT-----GILR---------------LRGLPFSAGKDDIMDFFKDFVLSE 198
+D+ H+ G LR LRGLP+ +DD+ FF +
Sbjct: 123 GSSINQDAGFHSNGTGHGNLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV-- 180
Query: 199 DSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDE 253
D + + DGR G+A V+FA+ D+ + R +GSR+IE+ S ++ E
Sbjct: 181 DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIE 235
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Query: 59 VRLRGLPFDCTEVDVAEFFHGLDIVD--VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V L+ L E D+ FF G D+ D + F++K+ T AF + + AL ++
Sbjct: 286 VHLKNLSLSIDERDLRNFFRGTDLTDEQIRFLYKDENRTRYAFVMFKTLKDYNTALSLHK 345
Query: 117 QNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKD-SAVHTGILRL 175
+ R V + R++ K IA R GSP R P S ++ ++ + +
Sbjct: 346 TVLQYRPVHIDPISRKQMLKFIAR-YEKKRSGSPERDRPGHVSQKYSQEGNSGQKLCIYI 404
Query: 176 RGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDS-KAAMAKDRM 234
R PF K ++ FF DF+L+ED I++ + G GEA V+F + E + KA R
Sbjct: 405 RNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRR 464
Query: 235 TLGSRYI 241
LG+ +
Sbjct: 465 FLGTEVL 471
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 57 PVVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV-HKNNKFTGEAFCVLGYPLQVDFALQRN 115
P + LRGLP+ E DV FF GL + V+F+ H + + G+A + L+ +
Sbjct: 155 PYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCH 214
Query: 116 RQNMGRRYVEVFRSKRQEYYKAIANEVS--DVRGGSPHRSIPRA--------KSHDEGKD 165
R MG R++EV + Q++ + N V DV S S PR +SH +
Sbjct: 215 RSFMGSRFIEVMQGSEQQWIEFGGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPR 274
Query: 166 SAVHTGIL----RLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN 221
L L+ L S + D+ +FF+ L+++ I + R T AFV F
Sbjct: 275 RTRSRSPLGFYVHLKNLSLSIDERDLRNFFRGTDLTDEQIRFLYKDENR-TRYAFVMFKT 333
Query: 222 AEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEALSR 257
+D A++ + L R + + P S ++M + ++R
Sbjct: 334 LKDYNTALSLHKTVLQYRPVHIDPISRKQMLKFIAR 369
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL GLPF AG DI FF + + +HI G GEAF+ FA ED++ A+++
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHII----GGEIGEAFIIFATDEDARRAISR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
+ +ELF SS EM + + R
Sbjct: 60 SGGFIKDSSVELFLSSKAEMQKTIEMKR 87
>sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2
Length = 1001
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 57 PVVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV-HKNNKFTGEAFCVLGYPLQVDFALQRN 115
P + LRGLP+ E DV FF GL + V+F+ H + + G+A + L+ +
Sbjct: 155 PYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCH 214
Query: 116 RQNMGRRYVEVFRSKRQEYYKAIANEVS--DVRGGSPHRSIPRA--------KSHDEGKD 165
R MG R++EV + Q++ + N V DV S S PR +SH +
Sbjct: 215 RSFMGSRFIEVMQGSEQQWIEFGGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPR 274
Query: 166 SAVHTGIL----RLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN 221
L L+ L S + D+ +FF+ L+++ I + R T AFV F
Sbjct: 275 RTRSRSPLGFYVHLKNLSLSIDERDLRNFFRGTDLTDEQIRFLYKDENR-TRYAFVMFKT 333
Query: 222 AEDSKAAMAKDRMTLGSRYIELFPSSHEEMDEALSR 257
+D A++ + L R + + P S ++M + ++R
Sbjct: 334 LKDYNTALSLHKTVLQYRPVHIDPISRKQMLKFIAR 369
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 58 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQ 117
V+RL GLPF VD+ FF GL I D VH GEAF + A+ R+
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFTGLTIPDGG-VHIIGGEIGEAFIIFATDEDARRAISRSGG 62
Query: 118 NMGRRYVEVFRSKRQEYYKAIANEVSDVRG-GSPHRSIP------------RAKSHDEG- 163
+ VE+F S + E K I + +D G G P + ++ + G
Sbjct: 63 FIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGTSGVDSLSNFIESVKEEASNSGY 122
Query: 164 -----KDSAVHT-----GILR---------------LRGLPFSAGKDDIMDFFKDFVLSE 198
+D+ HT G LR LRGLP+ +DD+ FF +
Sbjct: 123 GSSINQDAGFHTNGTGHGNLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV-- 180
Query: 199 DSIHITMNSDGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSHEEMDE 253
D + + DGR G+A V+FA+ D+ + R +GSR+IE+ S ++ E
Sbjct: 181 DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIE 235
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 59 VRLRGLPFDCTEVDVAEFFHGLDIVD--VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNR 116
V L+ L E D+ FF G D+ D + F++K+ T AF + + AL ++
Sbjct: 286 VHLKNLSLSIDERDLRNFFRGTDLTDEQIRFLYKDENRTRYAFVMFKTLKDYNTALSLHK 345
Query: 117 QNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKD-SAVHTGILRL 175
+ R V + R++ K IA R GS R P S ++ ++ + +
Sbjct: 346 TVLQYRPVHIDPISRKQMLKFIAR-YEKKRSGSLERDRPGHVSQKYSQEGNSGQKLCIYI 404
Query: 176 RGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDS-KAAMAKDRM 234
R PF K ++ FF DF+L+ED I++ + G GEA V+F + E + KA R
Sbjct: 405 RNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRR 464
Query: 235 TLGSRYI 241
LG+ +
Sbjct: 465 FLGTEVL 471
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 172 ILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMAK 231
++RL GLPF AG DI FF + + +HI G GEAF+ FA ED++ A+++
Sbjct: 4 VIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHII----GGEIGEAFIIFATDEDARRAISR 59
Query: 232 DRMTLGSRYIELFPSSHEEMDEALSRGR 259
+ +ELF SS EM + + R
Sbjct: 60 SGGFIKDSSVELFLSSKAEMQKTIEMKR 87
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAMA-- 230
+++ LPF A ++I+DFF + + DS+ I N G PTGEA V N ++ AA+
Sbjct: 927 IKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPTGEAIVAMINYNEAMAAIKDL 986
Query: 231 KDRMTLGSRYIEL 243
DR +G R ++L
Sbjct: 987 NDR-PVGPRKVKL 998
>sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19 PE=1 SV=3
Length = 960
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 52 QPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV---HKNNKFTGEAFCVLGYPLQV 108
+P V+LRG PF+ TE +V EF L V + V H N TG F +V
Sbjct: 289 EPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNK--TGYIFVDFSNEEEV 346
Query: 109 DFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAV 168
AL+ NR+ MG RY+EVFR K K + G R +E ++
Sbjct: 347 KQALKCNREYMGGRYIEVFREKNVPTTKGAPKNTTKSWQG-------RILGENEEEEDLA 399
Query: 169 HTGILRLRGLPFSAGKDDIMDFFKDF-VLSEDSIHITMNS-DGRPTGEAFVEFANAEDS- 225
+G L +R LP+++ ++D+ F + LSE +H ++S +P G AF+ F E +
Sbjct: 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSE--LHYPIDSLTKKPKGFAFITFMFPEHAV 457
Query: 226 KAAMAKDRMTLGSRYIELFPSS 247
KA D R + + PS+
Sbjct: 458 KAYSEVDGQVFQGRMLHVLPST 479
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 158 KSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFV 217
K ++ + + HT ++LRG PF+ + ++M+F L +I I N+ G TG FV
Sbjct: 283 KPANQKEPTTCHT--VKLRGAPFNVTEKNVMEFLAP--LKPVAIRIVRNAHGNKTGYIFV 338
Query: 218 EFANAEDSKAAMAKDRMTLGSRYIELF 244
+F+N E+ K A+ +R +G RYIE+F
Sbjct: 339 DFSNEEEVKQALKCNREYMGGRYIEVF 365
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 31/214 (14%)
Query: 25 DQGPSFYGTPPSSSFMYNPPPAYGYVSQPPPFPVVRLRGLPFDCTEVDVAEFFHGLDIVD 84
D+ P+ G SS+ M + P + ++ L FD TE + E F + V
Sbjct: 698 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVK 757
Query: 85 VLFVHKNNKFTGEAFCVLGY-------PLQVDFALQRNRQNM--GRRYVEVFRSKRQEYY 135
+ K G +G+ P Q AL++ + ++ G + +EV S+R
Sbjct: 758 SCSISKKKNKAG-VLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHK-LEVRISER---- 811
Query: 136 KAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKDF- 194
A V+ R + +PR ++ T + +R +PF A +I + F F
Sbjct: 812 -ATKPAVTLAR----KKQVPRKQT----------TSKILVRNIPFQAHSREIRELFSTFG 856
Query: 195 VLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAA 228
L + M G G FV+F +D+K A
Sbjct: 857 ELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 890
>sp|P15771|NUCL_CHICK Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1
Length = 694
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 106 LQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKD 165
L+V L + + G Y+E F+++ + + ++V G + KS E +
Sbjct: 395 LEVRLVLNKEGSSKGMAYIE-FKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQESQK 453
Query: 166 SA--VHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAE 223
+ L + L ++A ++ + + FK SI + N+ GRP G AFVEF AE
Sbjct: 454 GGGERESKTLIVNNLSYAASEETLQELFKKAT----SIKMPQNNQGRPKGYAFVEFPTAE 509
Query: 224 DSKAAM 229
D+K A+
Sbjct: 510 DAKEAL 515
>sp|Q4PC17|MRD1_USTMA Multiple RNA-binding domain-containing protein 1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=MRD1 PE=3 SV=1
Length = 858
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 165 DSAVHTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPT-GEAFVEFANAE 223
D + +G L +R LPF+A D+I+ FF+ F + +HI ++ + + G AFV F++
Sbjct: 308 DQIMESGRLFIRNLPFAASGDEILAFFESFGTVK-QVHIPLDKQTKASKGLAFVSFSDPA 366
Query: 224 DSKAAM-AKDRMTLGSRYIELFPSSHEE 250
+ AA AKD T R + L P+ +++
Sbjct: 367 HALAAYRAKDGSTFQGRLLHLLPAVNKD 394
>sp|Q4R4J7|NUCL_MACFA Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3
Length = 711
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 62 RGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNM-- 119
+ LP+ T+ ++ E F D ++ V K+ K G A+ ++F + + +
Sbjct: 399 KNLPYKVTQDELKEVFE--DAAEIRLVSKDGKSKGIAY--------IEFKTEADAEKTFE 448
Query: 120 GRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLP 179
++ E+ YY + D RGG +K+ L L L
Sbjct: 449 EKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKT-------------LVLSNLS 495
Query: 180 FSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+SA ++ + + F+ I + N +G+ G AF+EFA+ ED+K A+
Sbjct: 496 YSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEAL 541
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 109 DFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAV 168
D A+ R M R++ V ++ KA+ E++ ++ + + K D K+
Sbjct: 336 DLAVVDVRIGMTRKFGYVDFESAEDLEKAL--ELTGLKVFGNEIKLEKPKGKDSKKERDA 393
Query: 169 HTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNS-DGRPTGEAFVEFANAEDSKA 227
T L + LP+ +D++ + F ED+ I + S DG+ G A++EF D++
Sbjct: 394 RT--LLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKTEADAEK 445
Query: 228 AMAKDRMT-LGSRYIELF 244
+ + T + R I L+
Sbjct: 446 TFEEKQGTEIDGRSISLY 463
>sp|Q5RF26|NUCL_PONAB Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3
Length = 712
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 62 RGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNM-- 119
+ LP+ T+ ++ E F D ++ V K+ K G A+ ++F + + +
Sbjct: 400 KNLPYKVTQDELKEVFE--DAAEIRLVSKDGKSKGIAY--------IEFKTEADAEKTFE 449
Query: 120 GRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLP 179
++ E+ YY + D RGG +K+ L L L
Sbjct: 450 EKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKT-------------LVLSNLS 496
Query: 180 FSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+SA ++ + + F+ I + N +G+ G AF+EFA+ ED+K A+
Sbjct: 497 YSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEAL 542
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 109 DFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAV 168
D A+ R M R++ V ++ KA+ E++ ++ + + K D K+
Sbjct: 337 DLAVVDVRIGMTRKFGYVDFESAEDLEKAL--ELTGLKVFGNEIKLEKPKGKDSKKERDA 394
Query: 169 HTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNS-DGRPTGEAFVEFANAEDSKA 227
T L + LP+ +D++ + F ED+ I + S DG+ G A++EF D++
Sbjct: 395 RT--LLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKTEADAEK 446
Query: 228 AMAKDRMT-LGSRYIELF 244
+ + T + R I L+
Sbjct: 447 TFEEKQGTEIDGRSISLY 464
>sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3
Length = 710
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 62 RGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNM-- 119
+ LP+ T+ ++ E F D ++ V K+ K G A+ ++F + + +
Sbjct: 398 KNLPYKVTQDELKEVFE--DAAEIRLVSKDGKSKGIAY--------IEFKTEADAEKTFE 447
Query: 120 GRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLP 179
++ E+ YY + D RGG +K+ L L L
Sbjct: 448 EKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKT-------------LVLSNLS 494
Query: 180 FSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM 229
+SA ++ + + F+ I + N +G+ G AF+EFA+ ED+K A+
Sbjct: 495 YSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEAL 540
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 109 DFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAV 168
D A+ R M R++ V ++ KA+ E++ ++ + + K D K+
Sbjct: 335 DLAVVDVRIGMTRKFGYVDFESAEDLEKAL--ELTGLKVFGNEIKLEKPKGKDSKKERDA 392
Query: 169 HTGILRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNS-DGRPTGEAFVEFANAEDSKA 227
T L + LP+ +D++ + F ED+ I + S DG+ G A++EF D++
Sbjct: 393 RT--LLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKTEADAEK 444
Query: 228 AMAKDRMT-LGSRYIELF 244
+ + T + R I L+
Sbjct: 445 TFEEKQGTEIDGRSISLY 462
>sp|P09405|NUCL_MOUSE Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2
Length = 707
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 62 RGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNR-QNMG 120
+ L F+ TE ++ E F D +++ V ++ K G A+ + L+ + +
Sbjct: 400 KNLSFNITEDELKEVFE--DAMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEID 457
Query: 121 RRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPF 180
R V + YY + +G R+ + E K L L L +
Sbjct: 458 GRSVSL-------YY-------TGEKGQRQERTGKTSTWSGESK-------TLVLSNLSY 496
Query: 181 SAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM-AKDRMTLGSR 239
SA K+ + + F+ I + N G+P G AF+EFA+ ED+K A+ + ++M + R
Sbjct: 497 SATKETLEEVFEKATF----IKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGR 552
Query: 240 YIEL 243
I L
Sbjct: 553 TIRL 556
>sp|Q5REG1|SART3_PONAB Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo
abelii GN=SART3 PE=2 SV=1
Length = 981
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN-AEDSKAAMAK 231
L + GLPFS K+++ + K +D + + N G+P G A+VE+ N ++ S+A M
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVKD-LRLVTNRAGKPKGLAYVEYENESQASQAVMKM 879
Query: 232 DRMTLGSRYIELFPSS 247
D MT+ I++ S+
Sbjct: 880 DGMTIKENVIKVAISN 895
>sp|Q9JLI8|SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus
musculus GN=Sart3 PE=2 SV=1
Length = 962
Score = 41.6 bits (96), Expect = 0.006, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN-AEDSKAAMAK 231
L + GLPFS K+++ D K +D + + N G+P G A+VE+ N ++ S+A M
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKD-LRLVTNRAGKPKGLAYVEYENESQASQAVMKM 861
Query: 232 DRMTLGSRYIEL 243
D MT+ I++
Sbjct: 862 DGMTIRENVIKV 873
>sp|P08199|NUCL_MESAU Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2
Length = 714
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 62 RGLPFDCTEVDVAEFFHGLDIVDVLFVHKNNKFTGEAFCVLGYPLQVDFALQRNR-QNMG 120
+ L F+ TE ++ E F D +++ V ++ K G A+ + L+ + +
Sbjct: 399 KNLSFNITEDELKEVFE--DALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEID 456
Query: 121 RRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAV--HTGILRLRGL 178
R V + YY + +G R+ GK+S + L L L
Sbjct: 457 GRSVSL-------YY-------TGEKGQRQERT---------GKNSTWSGESKTLVLSNL 493
Query: 179 PFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFANAEDSKAAM-AKDRMTLG 237
+SA ++ + + F+ I + N G+ G AF+EFA+ ED+K A+ + ++M +
Sbjct: 494 SYSATEETLQEVFEKATF----IKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIE 549
Query: 238 SRYIEL 243
R I L
Sbjct: 550 GRTIRL 555
>sp|Q15020|SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo
sapiens GN=SART3 PE=1 SV=1
Length = 963
Score = 40.0 bits (92), Expect = 0.016, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 173 LRLRGLPFSAGKDDIMDFFKDFVLSEDSIHITMNSDGRPTGEAFVEFAN-AEDSKAAMAK 231
L + GLPFS K+++ + K +D + + N G+P G A+VE+ N ++ S+A M
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKD-LRLVTNRAGKPKGLAYVEYENESQASQAVMKM 861
Query: 232 DRMTLGSRYIEL 243
D MT+ I++
Sbjct: 862 DGMTIKENIIKV 873
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,423,883
Number of Sequences: 539616
Number of extensions: 4930967
Number of successful extensions: 13052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 12395
Number of HSP's gapped (non-prelim): 427
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)