Your job contains 1 sequence.
>025004
MSSSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARE
LEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHV
VLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTM
ASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL
PCIIAILYAVAGQVHQRQI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025004
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005452975 - symbol:RIE1 "RING-finger protein ... 449 1.9e-42 1
TAIR|locus:2200301 - symbol:AT1G68070 species:3702 "Arabi... 409 3.4e-38 1
TAIR|locus:2015248 - symbol:AT1G63170 species:3702 "Arabi... 340 6.9e-31 1
TAIR|locus:2139717 - symbol:AT4G11680 species:3702 "Arabi... 330 7.9e-30 1
TAIR|locus:2195077 - symbol:AT1G12760 species:3702 "Arabi... 312 6.4e-28 1
TAIR|locus:2098916 - symbol:AT3G61180 species:3702 "Arabi... 308 1.7e-27 1
>TAIR|locus:1005452975 [details] [associations]
symbol:RIE1 "RING-finger protein for embryogenesis"
species:3702 "Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC006069 UniGene:At.47033 UniGene:At.66449
EMBL:AY168924 IPI:IPI00539076 RefSeq:NP_849924.1
ProteinModelPortal:Q8GUU2 SMR:Q8GUU2 EnsemblPlants:AT2G01735.1
GeneID:814703 KEGG:ath:AT2G01735 GeneFarm:3082 TAIR:At2g01735
eggNOG:NOG277561 HOGENOM:HOG000240958 InParanoid:Q8GUU2
PhylomeDB:Q8GUU2 ProtClustDB:CLSN2682050 Genevestigator:Q8GUU2
Uniprot:Q8GUU2
Length = 359
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 102/241 (42%), Positives = 114/241 (47%)
Query: 16 PLLRPR-DPSVSPNXXXXXXXXXXXXXXXXXXH-GPSMLVXXXXXXXXXXXXXDWGYSKP 73
PLLRPR D S S + H PSMLV DWGYSKP
Sbjct: 17 PLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARALEERRIDWGYSKP 76
Query: 74 VVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYXXXXXX 133
VVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL HVVLVW EY
Sbjct: 77 VVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNST 136
Query: 134 XXXDD--EMGGEDFRXXXXXXXXXXXXGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
D ED+ ST SF KRCESINT+ SF+WWI+GFY
Sbjct: 137 RRARDLESYDHEDYNIEYDYEQDSDD------NSTTYSFVKRCESINTVISFIWWIIGFY 190
Query: 192 WVVSGGDLLLQAAPRLYWLXXXXXXXXXXXXXXCVVXXXXXXXXXXXXXXXXXXXXYAVA 251
WVV GGD LL AP LYWL CVV YAVA
Sbjct: 191 WVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVA 250
Query: 252 G 252
G
Sbjct: 251 G 251
>TAIR|locus:2200301 [details] [associations]
symbol:AT1G68070 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0005774
GO:GO:0046872 GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 ProtClustDB:CLSN2682050
EMBL:BT024880 IPI:IPI00540766 PIR:H96703 RefSeq:NP_176974.1
UniGene:At.35572 ProteinModelPortal:Q9C9X1 SMR:Q9C9X1 PRIDE:Q9C9X1
EnsemblPlants:AT1G68070.1 GeneID:843135 KEGG:ath:AT1G68070
TAIR:At1g68070 InParanoid:Q9C9X1 OMA:MLWNTAF PhylomeDB:Q9C9X1
Genevestigator:Q9C9X1 Uniprot:Q9C9X1
Length = 343
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 86/206 (41%), Positives = 106/206 (51%)
Query: 48 GPSMLVXXXXXXXXXXXXXDWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRL 107
G SM+V DWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+
Sbjct: 42 GASMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRI 101
Query: 108 WICGYALQCLVHVVLVWMEYXXXXXXXXXDDEMGGEDFRXXXXXXXXXXXXGIVYRTSTR 167
WICGYA+QCLVHVVLVW+E+ D + R
Sbjct: 102 WICGYAIQCLVHVVLVWLEFRKRNARSRPGDLEAAQATNQDSEDED----------NDER 151
Query: 168 TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLXXXXXXXXXXXXXXCVV 227
TK CES+NT+ SF+WWIVGFYW+VSGGD+LLQ A LYWL CVV
Sbjct: 152 FLSTKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVV 211
Query: 228 XXXXXXXXXXXXXXXXXXXXYAVAGQ 253
YAVAGQ
Sbjct: 212 LACLIGIALCCCLPCIIALLYAVAGQ 237
>TAIR|locus:2015248 [details] [associations]
symbol:AT1G63170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC010795 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:AY058092 EMBL:AY086095 IPI:IPI00547063
PIR:C96657 RefSeq:NP_564810.1 UniGene:At.26656
ProteinModelPortal:Q8LDB8 SMR:Q8LDB8 EnsemblPlants:AT1G63170.1
GeneID:842621 KEGG:ath:AT1G63170 TAIR:At1g63170 InParanoid:Q8LDB8
OMA:ANTMISF PhylomeDB:Q8LDB8 Genevestigator:Q8LDB8 Uniprot:Q8LDB8
Length = 381
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 68/174 (39%), Positives = 90/174 (51%)
Query: 49 PSMLVXXXXXXXXXXXXXDWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLV DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYXXXXXXXXXD-DEMGGEDFRXXXXXXXXXXXXGIVYRTSTR 167
I GY LQC++H+V V +EY D G+ + R
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 168 -----------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWL 210
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWL 222
>TAIR|locus:2139717 [details] [associations]
symbol:AT4G11680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005774
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161532 HSSP:Q9LRB7 EMBL:AL049500 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059121 EMBL:AY057713 EMBL:BT010750
IPI:IPI00525329 PIR:T04215 RefSeq:NP_567379.1 UniGene:At.20734
ProteinModelPortal:Q93Z92 SMR:Q93Z92 EnsemblPlants:AT4G11680.1
GeneID:826773 KEGG:ath:AT4G11680 GeneFarm:3078 TAIR:At4g11680
eggNOG:NOG288486 InParanoid:Q93Z92 OMA:HLEERQT PhylomeDB:Q93Z92
Genevestigator:Q93Z92 Uniprot:Q93Z92
Length = 390
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 65/162 (40%), Positives = 87/162 (53%)
Query: 49 PSMLVXXXXXXXXXXXXXDWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLV DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 84 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 143
Query: 109 ICGYALQCLVHVVLVWMEYXXXXXXXXXDDEMGGEDFRXXXXXXXXXXXXGIVYRTSTRT 168
+ GY +QC +H+ V +EY +D GG + R T
Sbjct: 144 VVGYGIQCWLHMACVCVEYRRRRRRRHPED--GGGSGLTNSSSQQYVSLAQLEDRGETSN 201
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWL 210
K ES NTM SF+WWI+GFYWV +GG L +P+LYWL
Sbjct: 202 P-AKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWL 242
>TAIR|locus:2195077 [details] [associations]
symbol:AT1G12760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AC025417 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059089 EMBL:AY136370 EMBL:BT000279
IPI:IPI00516637 RefSeq:NP_172736.2 UniGene:At.43884
ProteinModelPortal:Q9LN71 SMR:Q9LN71 PaxDb:Q9LN71 PRIDE:Q9LN71
EnsemblPlants:AT1G12760.1 GeneID:837832 KEGG:ath:AT1G12760
TAIR:At1g12760 InParanoid:Q9LN71 OMA:ESPRIYW PhylomeDB:Q9LN71
Genevestigator:Q9LN71 Uniprot:Q9LN71
Length = 408
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 66/178 (37%), Positives = 89/178 (50%)
Query: 49 PSMLVXXXXXXXXXXXXXDWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLV DW YSKPVV LDI+WN AFV V+ A+L+++ E P +R+W
Sbjct: 75 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 134
Query: 109 ICGYALQCLVHVVLVWMEYXX----------------XXXXXXXDDEMGGEDFRXXXXXX 152
+ GYALQC++H+V V +EY E+
Sbjct: 135 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 194
Query: 153 XXXXXXGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWL 210
+ + + +S K ES NTM SF+WWI+GFYWV +GG L Q +PR+YWL
Sbjct: 195 SGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWL 252
>TAIR|locus:2098916 [details] [associations]
symbol:AT3G61180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG302028 HOGENOM:HOG000240958 ProtClustDB:CLSN2682050
EMBL:AY059830 EMBL:AY064638 IPI:IPI00525767 RefSeq:NP_567110.1
UniGene:At.21194 ProteinModelPortal:Q93YQ5 SMR:Q93YQ5
EnsemblPlants:AT3G61180.1 GeneID:825290 KEGG:ath:AT3G61180
TAIR:At3g61180 InParanoid:Q93YQ5 OMA:RMMLREP PhylomeDB:Q93YQ5
Genevestigator:Q93YQ5 Uniprot:Q93YQ5
Length = 379
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 66/166 (39%), Positives = 84/166 (50%)
Query: 49 PSMLVXXXXXXXXXXXXXDWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ V W YSKP++ LDI+WN FVIVS A+L + +E P +RLW
Sbjct: 59 PSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLW 118
Query: 109 ICGYALQCLVHVVLVWMEYXXXXXXXXXDDEMGGEDFRXXXXXXXXXXXXGI-VYRTSTR 167
I GY +QCL HV V EY G + G + T
Sbjct: 119 IIGYNVQCLFHVGCVIAEYKRRRVANSPPPS-GEDSSNHESLSGSEDESDGYSINNTDDD 177
Query: 168 ---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWL 210
TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYWL
Sbjct: 178 DHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWL 223
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.139 0.472 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 159 0.00091 106 3 11 22 0.42 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 600 (64 KB)
Total size of DFA: 173 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.74u 0.13s 10.87t Elapsed: 00:00:00
Total cpu time: 10.74u 0.13s 10.87t Elapsed: 00:00:00
Start: Sat May 11 11:23:56 2013 End: Sat May 11 11:23:56 2013