BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025004
(259 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/247 (74%), Positives = 207/247 (83%), Gaps = 4/247 (1%)
Query: 8 AARSDSHAPLLRPR-DPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRA 66
+ ++ HAPLLRPR DP SP + R TL+ LLGRATGR GPSMLVRETAAREL+ERRA
Sbjct: 2 STENEPHAPLLRPRQDPPTSPTS-RQTTLSALLGRATGR-RGPSMLVRETAARELDERRA 59
Query: 67 DWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWME 126
DWGYSKPVV+LD+MWN+AFV+VS ML++T+ ERP+T IR+WICGYALQCLVHVVLVW+E
Sbjct: 60 DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119
Query: 127 YRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWW 186
YRRRNTRR RD E + + N DEE+D + S R+S TKRCES+NTM SFLWW
Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDEEDDRASF-ISPRSSVTKRCESVNTMVSFLWW 178
Query: 187 IVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 246
+VGFYWVVSGGD+LLQ AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI
Sbjct: 179 MVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 238
Query: 247 LYAVAGQ 253
LYAVAGQ
Sbjct: 239 LYAVAGQ 245
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/241 (77%), Positives = 202/241 (83%), Gaps = 4/241 (1%)
Query: 15 APLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPV 74
APLLRPR + +ARP TLALL+GRATGR GPSMLVRETAARELEERRADWGYSKPV
Sbjct: 1956 APLLRPRQ-GTAEQSARPTTLALLMGRATGR-RGPSMLVRETAARELEERRADWGYSKPV 2013
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
VALD+MWN +FVIVS MLI T ERP+T IRLWICGYALQC VHVVLVW+EYRRRN RR
Sbjct: 2014 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRR 2073
Query: 135 VRDDEMGGE-DFRDVN-NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
VRD+E + D + NDSEDE+ + ++S TKRCES+NTMASFLWWIVGFYW
Sbjct: 2074 VRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYW 2133
Query: 193 VVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 252
VVSGG+ LLQ APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG
Sbjct: 2134 VVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 2193
Query: 253 Q 253
Q
Sbjct: 2194 Q 2194
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/241 (76%), Positives = 202/241 (83%), Gaps = 4/241 (1%)
Query: 15 APLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPV 74
APLLRPR + +ARP TLALL+GRATGR GPSMLVRETAARELEERRADWGYSKPV
Sbjct: 12 APLLRPRQ-GTAEQSARPTTLALLMGRATGR-RGPSMLVRETAARELEERRADWGYSKPV 69
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
VALD+MWN +FVIVS MLI T ERP+T IRLWICGYALQC VHVVLVW+EYRRR+ RR
Sbjct: 70 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRR 129
Query: 135 VRDDEMGGE-DFRDVN-NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
VRD+E + D + NDSEDE+ + ++S TKRCES+NTMASFLWWIVGFYW
Sbjct: 130 VRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYW 189
Query: 193 VVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 252
VVSGG+ LLQ APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG
Sbjct: 190 VVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 249
Query: 253 Q 253
Q
Sbjct: 250 Q 250
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/252 (71%), Positives = 204/252 (80%), Gaps = 18/252 (7%)
Query: 14 HAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKP 73
HAPLL PR A R A+LA+LLGR TGR GPSMLVRETAA ELEERRADWGYSKP
Sbjct: 612 HAPLLHPRQ-----EAPRAASLAMLLGRVTGR-RGPSMLVRETAALELEERRADWGYSKP 665
Query: 74 VVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR 133
VVALD++WN+AFV+VS MLI+++ E+P+T IR+WICGYALQCLVHVVLVW+EYRRRN+R
Sbjct: 666 VVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSR 725
Query: 134 RVRDDE----------MGGEDFRDVNNDSEDEEEDGI--VYRTSTRTSFTKRCESINTMA 181
RVRD+E + G+ + + + E+EDG+ TS R+S KRCES+NTMA
Sbjct: 726 RVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSSVIKRCESVNTMA 785
Query: 182 SFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 241
SFLWWIVGFYWVVSGGD LLQ AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP
Sbjct: 786 SFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 845
Query: 242 CIIAILYAVAGQ 253
CIIAILYAVAGQ
Sbjct: 846 CIIAILYAVAGQ 857
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/255 (64%), Positives = 189/255 (74%), Gaps = 10/255 (3%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAA 58
S SSD+ A D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAA
Sbjct: 3 SYSSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
R LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL
Sbjct: 62 RALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLF 121
Query: 119 HVVLVWMEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESI 177
HVVLVW EY RRN TRR RD E + ++ D E + +D ST SF KRCESI
Sbjct: 122 HVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDD-----NSTTYSFVKRCESI 176
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT+ SF+WWI+GFYWVV GGD LL AP LYWL+V+FLA DVFFA+FCVVLACL+GIALC
Sbjct: 177 NTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALC 236
Query: 238 CCLPCIIAILYAVAG 252
CCLPCIIA+LYAVAG
Sbjct: 237 CCLPCIIALLYAVAG 251
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/256 (70%), Positives = 201/256 (78%), Gaps = 13/256 (5%)
Query: 1 MSSSSDAAARS-DSHAPLLRP-RDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAA 58
MSS + A+ + +SHAPLLRP D S +P TLALLLGRA RG PSMLVRETAA
Sbjct: 1 MSSQTAASMEAPESHAPLLRPLTDASRAPVP----TLALLLGRAGRRG--PSMLVRETAA 54
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
RELEERRADWGYSKPVVALD+ WN AFV+V+A ML T ERP+T IR+WI GYALQCLV
Sbjct: 55 RELEERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLV 114
Query: 119 HVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRT-STRTSFTKRCESI 177
HV+LVW+EYRRR+ R D G+ RDV +D+ +ED R S+ SFTKRCE +
Sbjct: 115 HVLLVWLEYRRRSRR----DSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSFTKRCELL 170
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT SFLWWIVGFYWVVSGG++LLQ APRLYWL VVFLAFDVFFAIFCVVLACLIGIALC
Sbjct: 171 NTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALC 230
Query: 238 CCLPCIIAILYAVAGQ 253
CCLPCIIAILYAVAGQ
Sbjct: 231 CCLPCIIAILYAVAGQ 246
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 191/251 (76%), Gaps = 14/251 (5%)
Query: 3 SSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELE 62
SS ++ + SDS PLLR R S RP +A+LLGRA+GR G SM+VRETAA+ELE
Sbjct: 2 SSPESPSGSDSSTPLLRSRQSS----PRRPPVIAVLLGRASGR-RGASMVVRETAAQELE 56
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ERRADWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+WICGYA+QCLVHVVL
Sbjct: 57 ERRADWGYSKPVVALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVL 116
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
VW+E+R+RN R D + N+DSEDE+ D R TK CES+NT+ S
Sbjct: 117 VWLEFRKRNARTRTGDLEAAQG--SGNHDSEDEDND-------ERILSTKTCESMNTIIS 167
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
F+WWI GFYW+VSGGD+LLQ A LYWL +FLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 168 FIWWIAGFYWLVSGGDILLQNATHLYWLTFIFLAFDVFFAIFCVVLACLIGIALCCCLPC 227
Query: 243 IIAILYAVAGQ 253
IIA+LYAVAGQ
Sbjct: 228 IIALLYAVAGQ 238
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/242 (69%), Positives = 181/242 (74%), Gaps = 22/242 (9%)
Query: 12 DSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYS 71
SHAPLL PR + AAR LALLLGR RGH S +VRETAARELEERRADW YS
Sbjct: 9 QSHAPLLLPRPDA----AARLPILALLLGR---RGH--SAVVRETAARELEERRADWTYS 59
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
KPVVALDI WN AFV+VSA ML T+ E P+T IR WICGYALQCLVHV LVW+EYRRRN
Sbjct: 60 KPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRN 119
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
++ + DVN+ ED FTKRC S+NTM S LWW+VGFY
Sbjct: 120 DAPRDEESAASLQYDDVNDSDED-------------ARFTKRCASLNTMISLLWWMVGFY 166
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WVVSGGD+LLQ APRLYWL+VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA
Sbjct: 167 WVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 226
Query: 252 GQ 253
GQ
Sbjct: 227 GQ 228
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 315 bits (808), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 164/255 (64%), Positives = 190/255 (74%), Gaps = 9/255 (3%)
Query: 1 MSSSSDAAARSDSHAPLLRPRDPSVSPNAARP--ATLALLLGRATGRGHGPSMLVRETAA 58
S S D A+ PLL R P + +A+ LALLLGRATGR G SMLVRETAA
Sbjct: 6 FSPSMDPPAQ---QIPLLPSRQPPSNSDASTSPIGPLALLLGRATGR-RGTSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
RELEERR DWGYSKPVVALDI WN AFV VS +LI +++E+P+T IRLWI YA QCLV
Sbjct: 62 RELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLV 121
Query: 119 HVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESIN 178
HVVLVW E++RRN RR RD E + D +E +E+DG + +S KRCES+N
Sbjct: 122 HVVLVWFEFKRRNARRARDMETQQQQEPDGYVTNESDEDDG---GQRSFSSVAKRCESVN 178
Query: 179 TMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCC 238
TM S +WW+ GFYWVV+GG++L+Q AP LYWLAVVFLAFDVFFA+FCVVLACLIGIALCC
Sbjct: 179 TMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCC 238
Query: 239 CLPCIIAILYAVAGQ 253
CLPCIIAILYAVAGQ
Sbjct: 239 CLPCIIAILYAVAGQ 253
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/251 (63%), Positives = 190/251 (75%), Gaps = 15/251 (5%)
Query: 3 SSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELE 62
SS ++ + SDS PLLR R S R +A+LL RA+GR G SM+VRETAA+ELE
Sbjct: 2 SSPESPSGSDSSTPLLRSRQSS----PRRQPVIAVLLNRASGR-RGASMVVRETAAQELE 56
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ERRADWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+WICGYA+QCLVHVVL
Sbjct: 57 ERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVL 116
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
VW+E+R+RN R D E + N DSEDE+ D R TK CES+NT+ S
Sbjct: 117 VWLEFRKRNARSRPGDL---EAAQATNQDSEDEDND-------ERFLSTKTCESMNTIIS 166
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
F+WWIVGFYW+VSGGD+LLQ A LYWL VFLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 167 FVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPC 226
Query: 243 IIAILYAVAGQ 253
IIA+LYAVAGQ
Sbjct: 227 IIALLYAVAGQ 237
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 159/240 (66%), Positives = 185/240 (77%), Gaps = 6/240 (2%)
Query: 16 PLLRPRDPSVSPNAARP--ATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKP 73
PLL R P + +A+ LALLLGRATGR G SMLVRETAARELEERR DWGYSKP
Sbjct: 18 PLLPSRQPPSNSDASTSPIGPLALLLGRATGR-RGTSMLVRETAARELEERRIDWGYSKP 76
Query: 74 VVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR 133
VVALDI WN AFV VS +LI +++E+P+T IRLWI YA QCLVHVVLVW E++RRN R
Sbjct: 77 VVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNAR 136
Query: 134 RVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWV 193
R RD E + D +E +E+DG + +S KRCES+NT+ S +WW+ GFYWV
Sbjct: 137 RARDMETQQQQQPDGYVTNESDEDDG---GQRSLSSVAKRCESVNTLVSLIWWLFGFYWV 193
Query: 194 VSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
V+GG++L+Q AP LYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAILYAVAGQ
Sbjct: 194 VAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 185/244 (75%), Gaps = 21/244 (8%)
Query: 13 SHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSK 72
+HAPLLRPR R LALLLGR GPS+LVRETAARELEERRADWGYSK
Sbjct: 7 AHAPLLRPR------RVGRTPVLALLLGR-----RGPSVLVRETAARELEERRADWGYSK 55
Query: 73 PVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT 132
PVV LD+ WN+ FV+V+A ML +++E P+T IRLWI GYA+QCLVHV LV +EYRRRN
Sbjct: 56 PVVLLDVTWNTVFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNV 115
Query: 133 ---RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
R RD+E DVN + EE+D + + S+ + F KRC S+NTM S LWW+VG
Sbjct: 116 IGGGRERDEE----SLDDVN---DSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLWWMVG 168
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
FYWVV+GGD+L+Q APRLYWLAVVFLAFDVFFA+FCV LACLIGIALCCCLPCII ILYA
Sbjct: 169 FYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGILYA 228
Query: 250 VAGQ 253
VAGQ
Sbjct: 229 VAGQ 232
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 190/251 (75%), Gaps = 15/251 (5%)
Query: 3 SSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELE 62
SS ++ + SDS PL+R R S R +A+LL RA+GR G SM+VRETAA+ELE
Sbjct: 2 SSPESPSGSDSSTPLIRSRQSS----PRRQPVIAVLLNRASGR-RGASMVVRETAAQELE 56
Query: 63 ERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVL 122
ERRADWGYSKPVVALD++WN+AFV+V+ ML++ E+P+ IR+WICGYA+QCLVHVVL
Sbjct: 57 ERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVL 116
Query: 123 VWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
VW+E+R+RN R D E + N DSEDE+ D R TK CES+NT+ S
Sbjct: 117 VWLEFRKRNARSRPGDL---EAAQATNQDSEDEDND-------ERFLSTKTCESMNTIIS 166
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
F+WWIVGFYW+VSGGD+LLQ A LYWL VFLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 167 FVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPC 226
Query: 243 IIAILYAVAGQ 253
IIA+LYAVAGQ
Sbjct: 227 IIALLYAVAGQ 237
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 188/249 (75%), Gaps = 12/249 (4%)
Query: 5 SDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEER 64
S + SHAPLL PR + AAR LALLLGR RGH S +VRETAARELEER
Sbjct: 2 SSPNSVPQSHAPLLLPRPDA----AARLPILALLLGR---RGH--SAVVRETAARELEER 52
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
RADW YSKPVVALDI WN AFV+VSA ML T+ E P+T IR WICGYALQCLVHV LVW
Sbjct: 53 RADWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVW 112
Query: 125 MEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL 184
+EYRRRN DE + + + DE++ G +S+ + FTKRC S+NTM S L
Sbjct: 113 LEYRRRND--APRDEESAASLQYDDVNDSDEDDVG-TSGSSSSSGFTKRCASLNTMISLL 169
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
WW+VGFYWVVSGGD+LLQ APRLYWL+VVFLAFDVFFAIFCVVLACLIGIALCCCLPCII
Sbjct: 170 WWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 229
Query: 245 AILYAVAGQ 253
AILYAVAGQ
Sbjct: 230 AILYAVAGQ 238
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 190/257 (73%), Gaps = 10/257 (3%)
Query: 1 MSSSSDAAARSDSHAPLLRPR-DPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAAR 59
MSS + + + PLLR R D P A LALLLGRA RG PSMLVRETAAR
Sbjct: 1 MSSQTAPTEAPEPYTPLLRSRTDAGRGPAPA----LALLLGRAGRRG--PSMLVRETAAR 54
Query: 60 ELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVH 119
ELEERRADWGYSKPVVALD+ WN AFV+VSAAML T +E P+T IR+WI GYALQCLVH
Sbjct: 55 ELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVH 114
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYR---TSTRTSFTKRCES 176
V+LVW+EYRRR+ R R D +D++ ++R+ F KRCES
Sbjct: 115 VLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCES 174
Query: 177 INTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 236
+NT SFLWWIVGFYWVVSGGD+LLQ APRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL
Sbjct: 175 LNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 234
Query: 237 CCCLPCIIAILYAVAGQ 253
CCCLPCIIAILYAVAGQ
Sbjct: 235 CCCLPCIIAILYAVAGQ 251
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/250 (68%), Positives = 192/250 (76%), Gaps = 13/250 (5%)
Query: 4 SSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEE 63
SS +AR HAPLL PR + AAR LALLLGR RGH S++VRETAARELEE
Sbjct: 2 SSPNSAR-QPHAPLLLPRPDA----AARLPVLALLLGR---RGH--SVMVRETAARELEE 51
Query: 64 RRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLV 123
RRADW YSKPVVALD+ WN AFV+VSA ML T+ E P+T IR WICGYALQCL+HV LV
Sbjct: 52 RRADWTYSKPVVALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALV 111
Query: 124 WMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF 183
W+EYRRRN +D D+ DV ++ +E+D +S+ T FTKRC S+NTM S
Sbjct: 112 WLEYRRRNDAPGDEDSAANLDYDDV---NDSDEDDVGTSGSSSSTGFTKRCASLNTMISL 168
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
LWW+VGFYWVVSGGD+LLQ APRLYWL VVFLAFDVFFAIFCVVLACLIGIALCCCLPCI
Sbjct: 169 LWWMVGFYWVVSGGDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 228
Query: 244 IAILYAVAGQ 253
IAILYAVAGQ
Sbjct: 229 IAILYAVAGQ 238
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 176/218 (80%), Gaps = 27/218 (12%)
Query: 36 ALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLII 95
A+LLGRATGR GPSMLVRETAAREL+ERRAD GYSKPVVALDI+WN+AFV+VS ML++
Sbjct: 1 AVLLGRATGR-RGPSMLVRETAARELDERRADLGYSKPVVALDILWNAAFVVVSVTMLVV 59
Query: 96 TINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE 155
T ERP+T IRLWICGY+LQCLVHV+LVW+EYRRRNTRR RD E
Sbjct: 60 TAKERPNTPIRLWICGYSLQCLVHVILVWLEYRRRNTRRGRDVE---------------- 103
Query: 156 EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFL 215
+ FTKRCES+NTM SFLWWIVGFYWVVSGGD LLQ APRLYWLAVVFL
Sbjct: 104 ----------SEQHFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFL 153
Query: 216 AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ
Sbjct: 154 AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 191
>gi|118489291|gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 218
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 164/203 (80%), Gaps = 4/203 (1%)
Query: 8 AARSDSHAPLLRPR-DPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRA 66
+ ++ HAPLLRPR DP SP +R TL+ LLGRATGR GPSMLVRETAAREL+ERRA
Sbjct: 2 STENEPHAPLLRPRQDPPTSP-TSRQTTLSALLGRATGR-RGPSMLVRETAARELDERRA 59
Query: 67 DWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWME 126
DWGYSKPVV+LD+MWN+AFV+VS ML++T+ ERP+T IR+WICGYALQCLVHVVLVW+E
Sbjct: 60 DWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLE 119
Query: 127 YRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWW 186
YRRRNTRR RD E + + N D+E+D + S R+S TKRCES+NTM SFLWW
Sbjct: 120 YRRRNTRRERDIESQQQSTEEENVPESDDEDDRASF-ISPRSSVTKRCESVNTMVSFLWW 178
Query: 187 IVGFYWVVSGGDLLLQAAPRLYW 209
+VGFYWVVSGGD+LLQ APRLYW
Sbjct: 179 MVGFYWVVSGGDVLLQNAPRLYW 201
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/233 (58%), Positives = 163/233 (69%), Gaps = 10/233 (4%)
Query: 24 SVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
S SP+AARP+ LA L+GRA GR GPSMLVRETAA +L+ RRADW +S+PVVALDI WN
Sbjct: 35 SPSPSAARPSRLAALIGRAAGR-RGPSMLVRETAALQLQRRRADWAHSRPVVALDIAWNV 93
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTR---RVRDDEM 140
AF +AA+L + E P +RLW+ GYA QCLVHV LV + RR R D E
Sbjct: 94 AFAAAAAAVLASSAEESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRARGSASDVES 153
Query: 141 GGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLL 200
G + + R R+S T RCE++NT+ SFLWWI+GFYW+VSGG++L
Sbjct: 154 AGA------GTDSSDADSEDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSGGEVL 207
Query: 201 LQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
APRLYWL VVFLAFDVFFA+FCV +AC IGIALCCCLPC+IAILYA+AGQ
Sbjct: 208 EYGAPRLYWLTVVFLAFDVFFAVFCVAVACFIGIALCCCLPCVIAILYALAGQ 260
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/258 (53%), Positives = 159/258 (61%), Gaps = 54/258 (20%)
Query: 1 MSSSSDAAARSDSHAPLLRPRDPSVSPNA-----ARPATLALLLGRATGRGHGPSMLVRE 55
+ SSSD+ A D HAPLLRPR S ++ ARP LA+LLGR TG PSMLVRE
Sbjct: 564 LMSSSDSTAARDQHAPLLRPRHDGSSSSSSSSSSARPTALAVLLGRITGH-RAPSMLVRE 622
Query: 56 TAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQ 115
TAAR LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WICGY LQ
Sbjct: 623 TAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICGYGLQ 682
Query: 116 CLVHVVLVWMEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRC 174
CL+HVVLVW EY RRN TRR RD E G + V D E + ++ YR
Sbjct: 683 CLIHVVLVWSEYWRRNTTRRARDLESGDHEDYSV-YDYEQDSDNSTTYR----------- 730
Query: 175 ESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
L+V+FLA DVFFAIFCVVLACL+GI
Sbjct: 731 -----------------------------------LSVIFLAIDVFFAIFCVVLACLVGI 755
Query: 235 ALCCCLPCIIAILYAVAG 252
ALCCCLPCIIA+LYAVAG
Sbjct: 756 ALCCCLPCIIALLYAVAG 773
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 151/214 (70%), Gaps = 10/214 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSM+VRE AA++LEER++DW YSKPVV LD++WN +FV+VS +L T+ ERP+T +R+W
Sbjct: 49 PSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR------VRDDEMGGEDFRDVNND---SEDEEEDG 159
I GYALQCL+H++ V EY RRN +R E VN+ + E E G
Sbjct: 109 IAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETG 168
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
T R+S KR ES+NTM SF WWIVGFYW+++GG L + APRLYWL +VFLAFDV
Sbjct: 169 -RQETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDV 227
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FF FC +AC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 228 FFVAFCAAVACMIGIAVCCCLPCIIAILYAVANQ 261
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 151/214 (70%), Gaps = 10/214 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSM+VRE AA++LEER++DW YSKPVV LD++WN +FV+VS +L T+ ERP+T +R+W
Sbjct: 49 PSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR------VRDDEMGGEDFRDVNND---SEDEEEDG 159
I GYALQCL+H++ V EY RRN +R E VN+ + E E G
Sbjct: 109 IAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETG 168
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
T R+S KR ES+NTM SF WWIVGFYW+++GG L + APRLYWL +VFLAFDV
Sbjct: 169 -RQETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDV 227
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FF FC +AC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 228 FFVAFCAAVACMIGIAVCCCLPCIIAILYAVANQ 261
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 167/256 (65%), Gaps = 25/256 (9%)
Query: 16 PLLRPRDP---------------SVSPNAARPATLALLLGRATGRGHGPSMLVRETAARE 60
PLLRP P S P+A RP+ LA L+GRA GR GPSMLVRETAA +
Sbjct: 13 PLLRPPSPQPNLRADAASSGDPASPPPSAVRPSRLAALIGRAAGR-RGPSMLVRETAALQ 71
Query: 61 LEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHV 120
L+ RRADW +S+PV+ALDI WN AF +AA+L + E P +RLW+ GYA QCLVHV
Sbjct: 72 LQRRRADWAHSRPVLALDIAWNVAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHV 131
Query: 121 VLVWMEYRRRNTR---RVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESI 177
LV + RR R D E G + + R R+S+T RCE++
Sbjct: 132 GLVCADTRRETRRARRSASDVESAGA------GTDSSDADSEDDERAEGRSSYTGRCETM 185
Query: 178 NTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALC 237
NT+ SFLWWI+GFYW+ SGG++L APRLYWL +VFLAFDVFFA+FCV +AC IGIALC
Sbjct: 186 NTLISFLWWIIGFYWIFSGGEVLEHGAPRLYWLTIVFLAFDVFFAVFCVAVACFIGIALC 245
Query: 238 CCLPCIIAILYAVAGQ 253
CCLPC+IAILYA+AGQ
Sbjct: 246 CCLPCVIAILYALAGQ 261
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/227 (58%), Positives = 160/227 (70%), Gaps = 1/227 (0%)
Query: 27 PNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFV 86
P AARP+ LA L+GRA GR GPSMLVRETAA +LE RRADW +S+PVVALD+ WN AF
Sbjct: 36 PPAARPSRLAALIGRAAGR-RGPSMLVRETAALQLERRRADWAHSRPVVALDVAWNVAFA 94
Query: 87 IVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR 146
+AA+L + E P+ +RLW+ GYALQC+VHV LV RR D
Sbjct: 95 AAAAAVLAASAAESPAKPLRLWLVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESDAA 154
Query: 147 DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPR 206
+ D E+D R+S +RCES+NT+ SFLWWI+GFYWVVSGGD+L Q APR
Sbjct: 155 NAGPDGSGSEDDDDEEAMDERSSSVERCESVNTLVSFLWWIIGFYWVVSGGDMLEQGAPR 214
Query: 207 LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
LYWL VVFLAFDVFFA+FCV +AC IG+ALCCCLPC++AILYA+ GQ
Sbjct: 215 LYWLTVVFLAFDVFFAVFCVAVACFIGVALCCCLPCVVAILYALVGQ 261
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 166/266 (62%), Gaps = 25/266 (9%)
Query: 6 DAAARSDSHAPLLRPRDPSVS--------------PNAARPATLALLLGRATGRGHGPSM 51
+ A S H PLLR PS + P+AARP+ LA L+GR G GPSM
Sbjct: 2 ETATTSPEH-PLLRRSSPSSNTNADADSVNLSSPPPSAARPSRLAALIGR-VGWPRGPSM 59
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
+V E +L RRADW +S+PVV LDI WN A +A +L + + P +RLW+ G
Sbjct: 60 MVHEATTLQLHRRRADWAHSRPVVTLDIAWNVACAAAAALVLASSAKDSPVKPLRLWLVG 119
Query: 112 YALQCLVHVVLVW--MEYRRRNT-RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
YA QCLVHV +V+ +E R R+ D E G DSED+E R+
Sbjct: 120 YAAQCLVHVGIVFTRLETRARHAWGPASDVESAGAGTDSSGTDSEDDET------AEGRS 173
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S RCE+IN + SFLWWI+GFYW+VSGG++L APRLYWL +VFLAFDVFFA+FCV +
Sbjct: 174 SHASRCETINRLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTIVFLAFDVFFAVFCVAM 233
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQV 254
+C IGIALCCCLPC++AILYA+AG+V
Sbjct: 234 SCFIGIALCCCLPCVVAILYALAGKV 259
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 136/164 (82%), Gaps = 2/164 (1%)
Query: 92 MLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVN-- 149
MLI T ERP+T IRLWICGYALQC VHVVLVW+EYRRRN RRVRD+E + +
Sbjct: 1 MLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDV 60
Query: 150 NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
NDSEDE+ + ++S TKRCES+NTMASFLWWIVGFYWVVSGG+ LLQ APRLYW
Sbjct: 61 NDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYW 120
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ
Sbjct: 121 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 164
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 156/237 (65%), Gaps = 11/237 (4%)
Query: 26 SPNAARPATLALLLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWN 82
SP R A LL RA+GR PS+ VRETAA +LEER++DW YSKP++ LD++WN
Sbjct: 39 SPQPLRGA--VRLLRRASGRQMMLREPSVRVRETAAEQLEERQSDWAYSKPIILLDLLWN 96
Query: 83 SAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRV------R 136
AFVI+S +L ++ +E+PS +R WI GYALQC++H+ V +EY+RR + R
Sbjct: 97 LAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQCIIHMSCVAVEYKRRRSTREPTGLDRN 156
Query: 137 DDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSG 196
D GED V+ D+ ++ K ES NTM SF+WW++GFYWV +G
Sbjct: 157 SDWTSGEDSNSVSGSDGDDYATEQTVNEDESSNLVKHIESANTMFSFIWWLLGFYWVTAG 216
Query: 197 GDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
G L++ +P+LYWL++ FLAFDV F + CV +ACL+G+A+CCCLPCIIAILYAV Q
Sbjct: 217 GQELIEGSPQLYWLSITFLAFDVVFVLICVAIACLVGVAICCCLPCIIAILYAVTDQ 273
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 155/229 (67%), Gaps = 19/229 (8%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+GR PSM+VRE AA +LEER++DW YSKPVV LDI+WN AFV +A +L
Sbjct: 47 ARFLRQASGRRLMREPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAATVL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDE--MGGEDFRDVNND 151
+++ NE P+ +RLWI GYALQ ++HV V +EYRRR R + + G+ D+++
Sbjct: 107 VLSRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHREHSNAAAVSGDGSGDLSSP 166
Query: 152 SEDE-------EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
S D ++DGI S K ES NTM SF+WW+VGFYWV + + L+Q +
Sbjct: 167 SMDGSGHYVSFDDDGI--------SMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDS 218
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
P LYWL + FL FDVFF +FC+ LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 219 PLLYWLCIAFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQ 267
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/249 (53%), Positives = 153/249 (61%), Gaps = 51/249 (20%)
Query: 8 AARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAARELEER 64
AAR D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAAR LEER
Sbjct: 585 AAR-DQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAARALEER 642
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
R DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL HVVLVW
Sbjct: 643 RIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVW 702
Query: 125 MEYRRRN-TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF 183
EY RRN TRR RD E + ++ D E + +D ST
Sbjct: 703 SEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDD-----NSTT---------------- 741
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
Y L+V+FLA DVFFA+FCVVLACL+GIALCCCLPCI
Sbjct: 742 ------------------------YRLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCI 777
Query: 244 IAILYAVAG 252
IA+LYAVAG
Sbjct: 778 IALLYAVAG 786
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 147/223 (65%), Gaps = 10/223 (4%)
Query: 38 LLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
LL RA+ R PS+ VRE AA +LEER++ W YSKP++ LDI+WN FVIVS A+L
Sbjct: 45 LLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFVFVIVSIAILG 104
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS-E 153
+ E P +RLWI GY QCL+HV V EY+RR R + GED + + S
Sbjct: 105 FSSEEDPDVPLRLWIIGYNFQCLLHVGCVIAEYKRR---REANSPPSGEDSSNHESLSGS 161
Query: 154 DEEEDGIVYRTSTR---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWL 210
D+E DG + TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYWL
Sbjct: 162 DDESDGYSINDTDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWL 221
Query: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
V FLAFDV F + CV +A LIGIA+CCCLPCIIAILYA+A Q
Sbjct: 222 CVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQ 264
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 147/224 (65%), Gaps = 10/224 (4%)
Query: 38 LLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
LL RA+ R PS+ VRE AA +LEER++ W YSKP++ LDI+WN FVIVS A+L
Sbjct: 45 LLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILG 104
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNN--DS 152
+ +E P +RLWI GY +QCL HV V EY+RR R GED + + S
Sbjct: 105 FSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRR--RVANSPPPSGEDSSNHESLSGS 162
Query: 153 EDEEEDGIVYRTSTR---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
EDE + + T TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYW
Sbjct: 163 EDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYW 222
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
L V FLAFDV F + CV +A LIGIA+CCCLPCIIAILYA+A Q
Sbjct: 223 LCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQ 266
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 147/224 (65%), Gaps = 10/224 (4%)
Query: 38 LLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
LL RA+ R PS+ VRE AA +LEER++ W YSKP++ LDI+WN FVIVS A+L
Sbjct: 28 LLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILG 87
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNN--DS 152
+ +E P +RLWI GY +QCL HV V EY+RR R GED + + S
Sbjct: 88 FSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRR--RVANSPPPSGEDSSNHESLSGS 145
Query: 153 EDEEEDGIVYRTSTR---TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
EDE + + T TSFTK ES NTM SF+WWI+GFYWV + + L Q++P+LYW
Sbjct: 146 EDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYW 205
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
L V FLAFDV F + CV +A LIGIA+CCCLPCIIAILYA+A Q
Sbjct: 206 LCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQ 249
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 146/210 (69%), Gaps = 5/210 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV+V+A +L+++ NE PS +RLW
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRLW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVR-----DDEMGGEDFRDVNNDSEDEEEDGIVYR 163
I GYA QC++H+V V +EYRRR R ++ + + + +
Sbjct: 122 IVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGLGSRANSSHYVSLAQL 181
Query: 164 TSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAI 223
+S K ES NTM SF+WWI+GFYWV +GG L QA+P LYWL ++FL FDVFF +
Sbjct: 182 DENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFVV 241
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 242 FCVALACIIGIAVCCCLPCIIALLYAVADQ 271
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 160/224 (71%), Gaps = 4/224 (1%)
Query: 31 RPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSA 90
RP+ LA L+GRA GR GPSMLVRETAA +L+ RRADW +S+PVVALD+ WN AF +A
Sbjct: 42 RPSRLAALIGRAAGR-RGPSMLVRETAALQLDRRRADWAHSRPVVALDVAWNVAFAAAAA 100
Query: 91 AMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEM-GGEDFRDVN 149
A+L + E P +RLW+ GYALQC+VHV LV RRR R ++ G N
Sbjct: 101 AVLAASTAESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARGPDIESGAATAGAN 160
Query: 150 NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
+ DE D R S T RCES+NTM SFLWWI+GFYWVV+GGD+L Q APRLYW
Sbjct: 161 SSESDEGNDEEAMEE--RASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYW 218
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
L VVFLAFDVFFA+FCVV+AC IG+ALCCCLPC++AILYA+ GQ
Sbjct: 219 LTVVFLAFDVFFAVFCVVVACFIGVALCCCLPCVVAILYALVGQ 262
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 150/247 (60%), Gaps = 18/247 (7%)
Query: 9 ARSDSHAPLL-RPRDPSVSPNAARPATLALLLGRATGRG---HGPSMLVRETAARELEER 64
A D+ +PLL R R PS A + LL RA+ RG S+ VRETAA ++EER
Sbjct: 16 ATDDASSPLLNRNRRPSQPLRGA----ASRLLRRASSRGMMLRESSVRVRETAAEQIEER 71
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
+++W YSKPV+ LD++WN AFV V+ + + E P +R WI GY LQCL+H+ V
Sbjct: 72 QSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVI 131
Query: 125 MEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL 184
EYRRR + R D + S DG + S K ES N + SF+
Sbjct: 132 AEYRRRESNRDLDSGLS----------SVQGSSDGYGAEIESGNSVAKHIESTNAIFSFV 181
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
WW++GFYWV + + L Q++P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCII
Sbjct: 182 WWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCII 241
Query: 245 AILYAVA 251
A+LYA+A
Sbjct: 242 AVLYALA 248
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 152/232 (65%), Gaps = 22/232 (9%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+GR PSM+VRE AA +LEER++DW YSKPVV LDI+WN AFV +A +
Sbjct: 45 ARFLRQASGRRLMREPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVF 104
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR--DVNND 151
I++ NE P+ +RLWI GYALQC++HV V +EY+RR RR + + D+
Sbjct: 105 ILSRNENPNMPLRLWIVGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPP 164
Query: 152 SEDE----------EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLL 201
S D ++DGI S K ES NTM SF+WW+VGFYWV + + L+
Sbjct: 165 SMDGSGHYVSLAQFDDDGI--------SMAKHLESANTMFSFIWWVVGFYWVSADSESLV 216
Query: 202 QAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+ +P LYWL + FL FDVFF +FC+ LAC++GIA+CCCLPCIIA+LYAVA Q
Sbjct: 217 RDSPLLYWLCIAFLGFDVFFVVFCMALACIVGIAVCCCLPCIIALLYAVADQ 268
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 160/230 (69%), Gaps = 14/230 (6%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ R PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L
Sbjct: 42 ARFLRRASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVL 101
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD----DEMGGEDFRDVN 149
+++ +E PST +RLWI GY LQC++H+V V +EY+RR RR+ + GG ++
Sbjct: 102 VMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRR--RRLVSSGALERSGGWGSGHLS 159
Query: 150 NDSEDEEEDGIVYRTSTR------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQA 203
+ S +E D I YR R TS K ES NTM SF+WWI+GFYWV +GG L +
Sbjct: 160 SSSGSDEGDPIDYRVEVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRD 219
Query: 204 APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+P+LYWL +VFLAFDVFF + CV +AC+IGIA+CCCLPCIIAILY VA Q
Sbjct: 220 SPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQ 269
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/264 (50%), Positives = 175/264 (66%), Gaps = 14/264 (5%)
Query: 1 MSSSSDAAARSDS---HAPLL----RPRDPSVSPNAARPATLALLLGRATGRGHGPSMLV 53
M++ ++R D+ APLL R R P+ A L GR R PS+LV
Sbjct: 1 MATPRSPSSRGDALLDSAPLLGGGTRRRGVLRRPSLRGTARLLRQGGRRAMRE--PSLLV 58
Query: 54 RETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RETAA +LEER+ADW YS+PVVALD++WN AF++VSA +L+ + +E PS +R+WI GYA
Sbjct: 59 RETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYA 118
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVY----RTSTRTS 169
+QC++H+V V +EYR R+ +R M ++ R + S +ED V R
Sbjct: 119 VQCVLHIVCVAIEYRFRHRQR-GGPSMAADEERGTDGSSSSTDEDAGVSIPHGRIGNYVR 177
Query: 170 FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV LA
Sbjct: 178 IAKHLESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALA 237
Query: 230 CLIGIALCCCLPCIIAILYAVAGQ 253
C+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 238 CIIGIAVCCCLPCIIAILYAVSDQ 261
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++ +A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILTTAVVLVLSGDESPSVPLRIW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS---EDEEEDGIVYRTS 165
I GYA+QC+VH+V V +EYR R+ +R M ++ R + S +D E G R
Sbjct: 114 IAGYAVQCVVHMVCVAIEYRVRHGQR-GGSSMAADEERGTDGSSSSIDDAGESGPHGRIG 172
Query: 166 TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFC 225
S K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +VFLAFDVFF +FC
Sbjct: 173 YFASVAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFC 232
Query: 226 VVLACLIGIALCCCLPCIIAILYAVAGQ 253
V LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 233 VALACIIGIAVCCCLPCIIAILYAVSDQ 260
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 135/208 (64%), Gaps = 10/208 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRE AA +LEER+ DW YSKP++ LD++WN AFV + +L +++ E P +R+W
Sbjct: 58 PSVRVRENAAEQLEERQTDWAYSKPIIFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVW 117
Query: 109 ICGYALQCLVHVVLVWMEYRRR----NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYR- 163
I GY+LQCL H+ V EY+RR + R D + +D D +DG+ R
Sbjct: 118 IIGYSLQCLFHIGCVIFEYKRRLFGTSARLEASDSTSVSE-----SDGGDSVDDGVEQRG 172
Query: 164 TSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAI 223
T K+ ES NTM SF+WWIVGFYWV +GG L +P+LYWL + FLAFDV F I
Sbjct: 173 NDGDTCVVKQLESANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVI 232
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVA 251
C+ +ACLIG+A+CCCLPCII ILYA+
Sbjct: 233 ICIAVACLIGLAICCCLPCIIGILYAMT 260
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 154/215 (71%), Gaps = 12/215 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L+++ +E PST +RLW
Sbjct: 4 PSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD----DEMGGEDFRDVNNDSEDEEEDGIVYRT 164
I GY LQC++H+V V +EY+RR RR+ + GG +++ S +E D I YR
Sbjct: 64 IIGYGLQCVLHMVCVCVEYKRR--RRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRV 121
Query: 165 STR------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFD 218
R TS K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL +VFLAFD
Sbjct: 122 EVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFD 181
Query: 219 VFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
VFF + CV +AC+IGIA+CCCLPCIIAILY VA Q
Sbjct: 182 VFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQ 216
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 152/243 (62%), Gaps = 7/243 (2%)
Query: 15 APLLRPRDPSVSPNAARPATLALLLGRATGRG---HGPSMLVRETAARELEERRADWGYS 71
AP L PR +P + R T A RA+GR PS+ VRE AA E+E R+++W YS
Sbjct: 20 APFL-PRSRRRAPPSLR--TAATFFRRASGRRMMLREPSVRVREAAAAEVEGRQSEWAYS 76
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEY-RRR 130
+PVVALD+ WN+AF+ + A++L ++ +E P +R WI GY LQ +H + V E+ RRR
Sbjct: 77 RPVVALDVAWNAAFLAIGASVLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRR 136
Query: 131 NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
T + G +++S++E + S TK ES NTM SF+WWIVGF
Sbjct: 137 RTATISGTHSGSNVEWSFSSESDEEFYPSEQFLEGDGNSITKHIESANTMLSFIWWIVGF 196
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
YWV +GG L + +P+LYWL + FL+FDV + CV +ACLIGIA+CCCLPCI+AILY V
Sbjct: 197 YWVTAGGQSLTRDSPQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAILYVV 256
Query: 251 AGQ 253
A Q
Sbjct: 257 ADQ 259
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 175/260 (67%), Gaps = 16/260 (6%)
Query: 1 MSSSSDAAARSDS---HAPLL----RPRDPSVSPNAARPATLALLLGRATGRGHGPSMLV 53
M++ ++R D+ APLL R R P+ A L GR R PS+LV
Sbjct: 1 MATPRSPSSRGDALLDSAPLLGGGTRRRGVLRRPSLRGTARLLRQGGRRAMRE--PSLLV 58
Query: 54 RETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RETAA +LEER+ADW YS+PVVALD++WN AF++VSA +L+ + +E PS +R+WI GYA
Sbjct: 59 RETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYA 118
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+QC++H+V V +EYR R+ +R M ++ R + S +ED V + R
Sbjct: 119 VQCVLHIVCVAIEYRFRHRQR-GGPSMAADEERGTDGSSSSTDEDAGV------SIPHGR 171
Query: 174 CESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV LAC+IG
Sbjct: 172 LESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 231
Query: 234 IALCCCLPCIIAILYAVAGQ 253
IA+CCCLPCIIAILYAV+ Q
Sbjct: 232 IAVCCCLPCIIAILYAVSDQ 251
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 142/216 (65%), Gaps = 23/216 (10%)
Query: 60 ELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVH 119
+LE RRADW +S+PVVALDI WN AF +AA+L+ + E P T +RLW+ GYALQCLVH
Sbjct: 2 QLERRRADWAHSRPVVALDIAWNVAFAAAAAAVLVASTEESPVTPLRLWLVGYALQCLVH 61
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT 179
V LV + RRR R ++ D ++ + D R+SF KRCESINT
Sbjct: 62 VGLVCSDSRRRPA-HARSSDVESADGDAAGAGTDSSDSDDDDEGREQRSSFAKRCESINT 120
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYW----------------------LAVVFLAF 217
M SFLWWI+GFYWVVSGGD+L Q APRLYW L+VVFLAF
Sbjct: 121 MVSFLWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKPVPITDYFMIVQSNVHMLSVVFLAF 180
Query: 218 DVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
DVFFA+FCV +AC IGIALCCCLPC+IAILYA+AGQ
Sbjct: 181 DVFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQ 216
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 173/260 (66%), Gaps = 26/260 (10%)
Query: 1 MSSSSDAAARSDS---HAPLL----RPRDPSVSPNAARPATLALLLGRATGRGHGPSMLV 53
M++ ++R D+ APLL R R P+ A L GR R PS+LV
Sbjct: 1 MATPRSPSSRGDALLDSAPLLGGGTRRRGVLRRPSLRGTARLLRQGGRRAMRE--PSLLV 58
Query: 54 RETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
RETAA +LEER+ADW YS+PVVALD++WN AF++VSA +L+ + +E PS +R+WI GYA
Sbjct: 59 RETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYA 118
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+QC++H+V V +EYR R+ +R GG + DEE T +S K
Sbjct: 119 VQCVLHIVCVAIEYRFRHRQR------GGPSM------AADEERG-----TDGSSSIAKH 161
Query: 174 CESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV LAC+IG
Sbjct: 162 LESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 221
Query: 234 IALCCCLPCIIAILYAVAGQ 253
IA+CCCLPCIIAILYAV+ Q
Sbjct: 222 IAVCCCLPCIIAILYAVSDQ 241
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 157/209 (75%), Gaps = 5/209 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++V+A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS----EDEEEDGIVYRT 164
I GYA+QC++H+V V +EYR R+ +R M ++ R + S ED E+ R
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHGQR-GGPSMAADEERGSDGSSSSTDEDAGENVTHGRI 172
Query: 165 STRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIF 224
S K ES NTM SF+WWI+GFYWV +GG++L++ AP+LYWL +VFLAFDVFF +F
Sbjct: 173 GDCVSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVF 232
Query: 225 CVVLACLIGIALCCCLPCIIAILYAVAGQ 253
CV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 233 CVALACIIGIAVCCCLPCIIAILYAVSDQ 261
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 155/206 (75%), Gaps = 17/206 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++V+A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYA+QC++H+V V +EYR R+ +R GG + DEE + +
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHGQR------GGPSM------AADEERG-----SDGSS 156
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG++L++ AP+LYWL +VFLAFDVFF +FCV L
Sbjct: 157 SIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVAL 216
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQV 254
AC+IGIA+CCCLPCIIAILYAV+ QV
Sbjct: 217 ACIIGIAVCCCLPCIIAILYAVSDQV 242
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 154/205 (75%), Gaps = 17/205 (8%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRETAA +LEER+ADW YS+PVVALD++WN AF++V+A +L+++ +E PS +R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYA+QC++H+V V +EYR R+ +R GG + DEE + +
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHGQR------GGPSM------AADEERG-----SDGSS 156
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG++L++ AP+LYWL +VFLAFDVFF +FCV L
Sbjct: 157 SIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVAL 216
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 217 ACIIGIAVCCCLPCIIAILYAVSDQ 241
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/257 (50%), Positives = 173/257 (67%), Gaps = 28/257 (10%)
Query: 23 PSVSPNAARPAT-------LALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKP 73
P+ S + AR + A L RA+ R PSMLVRETAA +LEER++DW YS+P
Sbjct: 31 PNASDDGARSLSRRASIQGAARFLRRASSRRIMREPSMLVRETAAEQLEERQSDWAYSRP 90
Query: 74 VVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR--N 131
VV LDI+WN AFV+V+ +L+++ +E P+ +R+W+ GYALQCL+H++ V EYRRR N
Sbjct: 91 VVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVGYALQCLLHMICVCFEYRRRHSN 150
Query: 132 TRRVRDDEMGGEDF---------------RDVNNDSEDEEEDGIVYRTSTRTSFTKRCES 176
++ R + G + ++D+ DEE D ++ ++ RTS KR ES
Sbjct: 151 AQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATDEEVDEVL--STERTSIAKRLES 208
Query: 177 INTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 236
NTM SF+WWIVGFYW+ +GG +L AP+LYWL VVFLAFDVFF +FCV LAC+IGIA+
Sbjct: 209 ANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLAFDVFFVVFCVALACVIGIAV 268
Query: 237 CCCLPCIIAILYAVAGQ 253
CCCLPCIIAILYAVA Q
Sbjct: 269 CCCLPCIIAILYAVADQ 285
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 131/202 (64%), Gaps = 10/202 (4%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+ VRETAA ++EER+++W YSKPV+ LD++WN AFV V+ + + E P +R WI
Sbjct: 7 SVRVRETAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWI 66
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTS 169
GY LQCL+H+ V EYRRR + R D + V S DG + S
Sbjct: 67 VGYNLQCLIHIACVIAEYRRRESNRDLDSGLSS-----VQGSS-----DGYGAEIESGNS 116
Query: 170 FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
K ES N + SF+WW++GFYWV + + L Q++P+LYWL V FLAFDV F + CV +A
Sbjct: 117 VAKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVA 176
Query: 230 CLIGIALCCCLPCIIAILYAVA 251
CLIGIA+CCCLPCIIA+LYA+A
Sbjct: 177 CLIGIAVCCCLPCIIAVLYALA 198
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 140/211 (66%), Gaps = 9/211 (4%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+ VRE AA ++EER+++W YSKPV+ LD++WN AFV V+ A+L + +E P +R WI
Sbjct: 60 SVRVRENAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWI 119
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE-----EEDGIVYRT 164
GY LQCL HV V EYRRR+ R+ D+ ED ++ S ++ IV +
Sbjct: 120 IGYNLQCLFHVGCVIAEYRRRHRRQ--SDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDS 177
Query: 165 STR--TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFA 222
TS K ES N + SF+WWI+GFYWV + + L Q++P+LYWL V FLAFDV F
Sbjct: 178 QIEPGTSLAKHLESANAIFSFVWWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFV 237
Query: 223 IFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+ CV +ACLIGIA+CCCLPCIIA+LYA+A +
Sbjct: 238 VLCVAVACLIGIAVCCCLPCIIAVLYALADR 268
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 148/220 (67%), Gaps = 27/220 (12%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD +WN AF++VSA +L+++ +E PS +R W
Sbjct: 55 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 114
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEE------------ 156
I GY QC+VH+V V +EY +R ++GG DEE
Sbjct: 115 IAGYTAQCVVHMVCVAIEYC------LRYGQLGGSPI------PVDEESGSGSASSSSSD 162
Query: 157 ---EDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
E G R+ S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL ++
Sbjct: 163 DDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCII 222
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 223 FLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 262
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 147/220 (66%), Gaps = 11/220 (5%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ R PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L
Sbjct: 42 ARFLRRASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVL 101
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
+++ +E PST +RLWI GY LQC++H+V V +EY+RR RR+ +
Sbjct: 102 VMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRR--RRLVSSGA-------LERSGG 152
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ S K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL +V
Sbjct: 153 WGSGHLSSSSGNFSCSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIV 212
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF + CV +AC+IGIA+CCCLPCIIAILY VA Q
Sbjct: 213 FLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQ 252
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 146/212 (68%), Gaps = 11/212 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV V+ +LI++ E PS +RLW
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRR RR R G D N S D Y T +
Sbjct: 122 IVGYGLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSD----GNLSSGSRGDSGEYVTLAQL 177
Query: 168 ------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF 221
+S K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF
Sbjct: 178 EDHDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFF 237
Query: 222 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 238 VVFCVALACIIGIAVCCCLPCIIAILYAVADQ 269
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/233 (51%), Positives = 152/233 (65%), Gaps = 13/233 (5%)
Query: 30 ARPATLALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVI 87
+R A L RA R PSMLVRE+AA +LE R++DW YSKPVV LD++WN AFV
Sbjct: 2 SRVQGAARFLRRAGSRRLMREPSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVQ 61
Query: 88 VSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD---DEMGGED 144
VS A+L+++ E +R+WI GYALQC+VH++ V EY RR + +
Sbjct: 62 VSLAVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQQVNANPSSVSSSNST 121
Query: 145 FRDVNNDSEDEE----EDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLL 200
+ +NN D + +DG+ S S+ KR ES NTM SF+WW+VGFYW+ +GG L
Sbjct: 122 YAPINNGENDVDSGFDDDGL----SNEASWAKRLESANTMFSFVWWVVGFYWITAGGQSL 177
Query: 201 LQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
AP +YWL V+FL FDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 178 AVDAPYVYWLCVLFLTFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 230
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%)
Query: 28 NAARPATL---ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
NA R +L A LL R+ R PSMLVRE AA LEER+ADW YS+PVVALD++WN
Sbjct: 32 NALRRPSLRGAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPVVALDLLWNI 91
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR----VRDDE 139
+F+ V+A +L+++ NE +R W+ GYALQC+VH+V V +EYR R ++R V DE
Sbjct: 92 SFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVPADE 151
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
G D ++D + E+ + R + S K ES NTM SF+WWI+GFYW+ +GG+
Sbjct: 152 ERGSDVSSSSSDED-ASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEE 210
Query: 200 LLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 211 VIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 264
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 163/235 (69%), Gaps = 11/235 (4%)
Query: 28 NAARPATL---ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
NA R +L A LL R+ R PSMLVRE AA LEER+ADW YS+PVVALD++WN
Sbjct: 32 NALRRPSLRGAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPVVALDLLWNI 91
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR-----VRDD 138
+F+ V+A +L+++ NE +R W+ GYALQC+VH+V V +EYR R ++R D+
Sbjct: 92 SFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVPADE 151
Query: 139 EMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGD 198
E G + +++ E + + R + S K ES NTM SF+WWI+GFYW+ +GG+
Sbjct: 152 ERGSDVSSSSSDEDASENQ--LRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGGE 209
Query: 199 LLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 210 EVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 264
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 163/235 (69%), Gaps = 11/235 (4%)
Query: 28 NAARPATL---ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 83
NA R +L A LL R+ R PSMLVRE AA LEER+ADW YS+PVVALD++WN
Sbjct: 32 NALRRPSLRGAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPVVALDLLWNI 91
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR-----VRDD 138
+F+ V+A +L+++ NE +R W+ GYALQC+VH+V V +EYR R ++R D+
Sbjct: 92 SFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVPADE 151
Query: 139 EMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGD 198
E G + +++ E + + R + S K ES NTM SF+WWI+GFYW+ +GG+
Sbjct: 152 ERGSDVSSSSSDEDASENQ--LRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGGE 209
Query: 199 LLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 210 EVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 264
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 145/208 (69%), Gaps = 3/208 (1%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD++WN AF++V+AA+L ++ E PS +RLW
Sbjct: 59 PSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPSMPLRLW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS---EDEEEDGIVYRTS 165
I GYA+QC++H+ V +EYR R + E+ + S ED E R
Sbjct: 119 IVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNG 178
Query: 166 TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFC 225
K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +VFLAFDVFF +FC
Sbjct: 179 DYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFC 238
Query: 226 VVLACLIGIALCCCLPCIIAILYAVAGQ 253
V LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 239 VALACIIGIAVCCCLPCIIAILYAVSDQ 266
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 151/232 (65%), Gaps = 14/232 (6%)
Query: 36 ALLLGRATGR--GHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +A+GR PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV+V+ +L
Sbjct: 44 AQFLRQASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVL 103
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVR-----DDEMGGEDFRDV 148
+++ +E P +RLWI GYA+QC++H+V V +EYRRR ++ D +G
Sbjct: 104 VLSASEAPGMPLRLWIVGYAMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLS 163
Query: 149 NNDSEDEEEDGIVYRT-------STRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLL 201
+ E + TS K ES NTM SF+WWI+GFYWV +GG L
Sbjct: 164 VSSREGSASASASAQNVLLGQLDDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALA 223
Query: 202 QAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
Q +P+LYWL ++FL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAV Q
Sbjct: 224 QDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVTDQ 275
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 154/212 (72%), Gaps = 8/212 (3%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDE-------MGGEDFRDVNNDSEDEEEDGIV 161
+ GY LQC++H+V V +EYRRRN+RR RD M ED ++ +S+D + +
Sbjct: 109 VIGYGLQCMMHMVCVCVEYRRRNSRRRRDMSPRSSSSSMEEEDGLGLSRNSDDRYLE-LG 167
Query: 162 YRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF 221
+ SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL FDVFF
Sbjct: 168 QLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFF 227
Query: 222 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 228 VVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 259
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 146/205 (71%), Gaps = 3/205 (1%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 84 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 143
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY +QC +H+ V +EYRRR RR +D GG N+ S+ + +
Sbjct: 144 VVGYGIQCWLHMACVCVEYRRRRRRRHPEDG-GGSGL--TNSSSQQYVSLAQLEDRGETS 200
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV L
Sbjct: 201 NPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVAL 260
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IG+A+CCCLPCIIAILYAVA Q
Sbjct: 261 ACVIGLAVCCCLPCIIAILYAVADQ 285
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 146/205 (71%), Gaps = 3/205 (1%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 84 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 143
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY +QC +H+ V +EYRRR RR +D GG N+ S+ + +
Sbjct: 144 VVGYGIQCWLHMACVCVEYRRRRRRRHPEDG-GGSGL--TNSSSQQYVSLAQLEDRGETS 200
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV L
Sbjct: 201 NPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVAL 260
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IG+A+CCCLPCIIAILYAVA Q
Sbjct: 261 ACVIGLAVCCCLPCIIAILYAVADQ 285
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 149/220 (67%), Gaps = 27/220 (12%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD +WN AF++VSA +L+++ +E PS +R W
Sbjct: 55 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 114
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEE------------ 156
I GY QC+VH+V V +EYR +R ++GG DEE
Sbjct: 115 IAGYTAQCVVHMVCVAIEYR------LRYGQLGGSPI------PVDEESGSGSASSSSSD 162
Query: 157 ---EDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
E G R+ S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +V
Sbjct: 163 DDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIV 222
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 223 FLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 262
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 149/220 (67%), Gaps = 27/220 (12%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD +WN AF++VSA +L+++ +E PS +R W
Sbjct: 4 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEE------------ 156
I GY QC+VH+V V +EYR +R ++GG DEE
Sbjct: 64 IAGYTAQCVVHMVCVAIEYR------LRYGQLGGSPI------PVDEESGSGSASSSSSD 111
Query: 157 ---EDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
E G R+ S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +V
Sbjct: 112 DDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIV 171
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 172 FLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 211
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 147/207 (71%), Gaps = 4/207 (1%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV + A+LI++ +E+P+ +R+W
Sbjct: 83 PSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVW 142
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD--DEMGGEDFRDVNNDSEDEEEDGIVYRTST 166
+ GY +QC +H+ V +EYRRR RR R ++ GG F N+ + +
Sbjct: 143 VVGYGIQCWLHMACVCVEYRRRRRRRHRSSSEDGGGPGF--TNSSQQQYVSLAQLEDRGE 200
Query: 167 RTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
++ K ES NTM SF+WWI+GFYWV +GG L +P+LYWL ++FL FDVFF +FCV
Sbjct: 201 TSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSGDSPQLYWLCIIFLGFDVFFVVFCV 260
Query: 227 VLACLIGIALCCCLPCIIAILYAVAGQ 253
LAC+IG+A+CCCLPCIIAILYAVA Q
Sbjct: 261 ALACVIGLAVCCCLPCIIAILYAVADQ 287
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 143/225 (63%), Gaps = 7/225 (3%)
Query: 34 TLALLLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSA 90
T A RA+GR PS+ +RE AA E+E R+++W YS+PVVALD+ WN+ F+ + A
Sbjct: 39 TAATFFRRASGRRMMLREPSVRMREAAAAEVEGRQSEWAYSRPVVALDVAWNAVFLAIGA 98
Query: 91 AMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV-- 148
++L ++ +E P +R WI GY LQ +H + V E+ RR RRV G V
Sbjct: 99 SVLALSTDEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRRRVSGTHPGSNVVGHVQW 158
Query: 149 --NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPR 206
+++S++E + S TK E++NTM SF+WWIVGFYWV +GG L + +P+
Sbjct: 159 SFSSESDEEFYPPEQFLEGDGNSITKHIETVNTMLSFIWWIVGFYWVTAGGQSLTRDSPQ 218
Query: 207 LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
LYWL + FLAFDV + CV +ACLIGIA+CCCLPCI+AILY VA
Sbjct: 219 LYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAILYVVA 263
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 150/229 (65%), Gaps = 13/229 (5%)
Query: 38 LLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLII 95
L +A+GR PS++VRE AA +LEER++DW YSKPVV LDI+WN AFVIV+ L +
Sbjct: 47 FLRQASGRRTMREPSVVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFL 106
Query: 96 TINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD--DEMGGEDFRDVNNDSE 153
+ NE P +RLWI GY LQC++H+V V EYRRR + + + G D N S
Sbjct: 107 SRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFSS 166
Query: 154 DEEEDGIVYRTS---------TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
E V +S TS K ES NTM SF+WWI+GFYWV +GG L Q +
Sbjct: 167 REGSRSAVSGSSYVSLAQFDEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDS 226
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
P+LYWL +VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 227 PQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQ 275
>gi|413919226|gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 150/214 (70%), Gaps = 10/214 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ +E +R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE--------EEDGI 160
+ GYALQC+VH++ V +EYR R+ +R + G DV S+ E +
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQR--GSAVAGAAPADVERGSDASSSSSDEDDRELDL 176
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
R + S K ES NTM SF+WWI+GFYW+ +GG+ ++Q AP+LYWL +VFLAFDVF
Sbjct: 177 HGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVF 236
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQV 254
F +FCV LAC+IGIA+CCCLPCIIAILYAV+ QV
Sbjct: 237 FVVFCVALACIIGIAVCCCLPCIIAILYAVSDQV 270
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 151/210 (71%), Gaps = 9/210 (4%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+LVRETA +L+ER++DW YS+PVV LD++WN AFV V+ +L+I+ +E+P T +R+W+
Sbjct: 5 SILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWV 64
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTS 169
GYALQC++H+ V EYRRR RR M ED D D EE +R T +S
Sbjct: 65 LGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEK---HRLLTGSS 121
Query: 170 F------TKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAI 223
F KR ES NTM SF+WW+VGFYW+ +G + L+Q++PR+YWL +VFLAFDVFF +
Sbjct: 122 FFPFCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVV 181
Query: 224 FCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FCV LAC+IGIA+CCCLPCIIAILYAV Q
Sbjct: 182 FCVALACMIGIAVCCCLPCIIAILYAVVDQ 211
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 149/207 (71%), Gaps = 3/207 (1%)
Query: 50 SMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
S+LVRETA +L+ER++DW YS+PVV LD++WN AFV V+ +L+I+ +E+P T +R+W+
Sbjct: 5 SILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWV 64
Query: 110 CGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR-- 167
GYALQC++H+ V EYRRR RR M ED D D EE + S+
Sbjct: 65 LGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHSLLTGSSFFP 124
Query: 168 -TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
S KR ES NTM SF+WW+VGFYW+ +G + L+Q++PR+YWL +VFLAFDVFF +FCV
Sbjct: 125 FCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCV 184
Query: 227 VLACLIGIALCCCLPCIIAILYAVAGQ 253
LAC+IGIA+CCCLPCIIAILYAV Q
Sbjct: 185 ALACMIGIAVCCCLPCIIAILYAVVDQ 211
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 166/266 (62%), Gaps = 35/266 (13%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL 231
K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 232 IGIALCCCLPCIIAILYAVAGQVHQR 257
IGIA+CCCLPCIIAILYAV QV Q
Sbjct: 224 IGIAVCCCLPCIIAILYAVTDQVSQE 249
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 158/220 (71%), Gaps = 8/220 (3%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +ATGR PSMLVR+TAA +LEER++DW YS+PVV LD+MWN AFV+V+ A+L
Sbjct: 37 ARYLRQATGRRPMREPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAVAVL 96
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
+ + ERP T +R+WI GYA+QCLVH+V V EYRRR R +R E+ +
Sbjct: 97 VNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVGHLSAGS 156
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ E D + S +KR ES NTM SF+WW++GFYW+ +GG L Q +PRLYWL+VV
Sbjct: 157 ESEIDMEAH------SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 250
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 158/220 (71%), Gaps = 8/220 (3%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L +ATGR PSMLVR+TAA +LEER++DW YS+PVV LD+MWN AFV+V+ A+L
Sbjct: 37 ARYLRQATGRRPMREPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAVAVL 96
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
+ + ERP T +R+WI GYA+QCLVH+V V EYRRR R +R E+ +
Sbjct: 97 VNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLSAGS 156
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ E D + S +KR ES NTM SF+WW++GFYW+ +GG L Q +PRLYWL+VV
Sbjct: 157 ESEIDMEAH------SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 250
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 149/213 (69%), Gaps = 10/213 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ +E +R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE--------EEDGI 160
+ GYALQC+VH++ V +EYR R+ +R + G DV S+ E +
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQR--GSAVAGAAPADVERGSDASSSSSDEDDRELDL 176
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
R + S K ES NTM SF+WWI+GFYW+ +GG+ ++Q AP+LYWL +VFLAFDVF
Sbjct: 177 HGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVF 236
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
F +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 237 FVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 269
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 149/213 (69%), Gaps = 10/213 (4%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ +E +R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE--------EEDGI 160
+ GYALQC+VH++ V +EYR R+ +R + G DV S+ E +
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQR--GSAVAGAAPADVERGSDASSSSSDEDDRELDL 176
Query: 161 VYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
R + S K ES NTM SF+WWI+GFYW+ +GG+ ++Q AP+LYWL +VFLAFDVF
Sbjct: 177 HGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVF 236
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
F +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 237 FVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 269
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 154/226 (68%), Gaps = 28/226 (12%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L+++ NE P +R+W
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRNEHPIMPLRVW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR---------------------VRDDEMGGEDFRD 147
+ GYALQC++H+V V +EYRRRN RR + +D +G
Sbjct: 64 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTPRSRSSSSSSSSSSLEEDALG------ 117
Query: 148 VNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL 207
+ + E++ + + + +S K ES NTM SF+WWI+GFYWV +GG L Q +PR+
Sbjct: 118 -SRRNSGEQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRI 176
Query: 208 YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 177 YWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQ 222
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 148/228 (64%), Gaps = 23/228 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA +LEER+ADW YS+PVVALD++WN AF++V+AA+L ++ E PS +RLW
Sbjct: 59 PSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPSMPLRLW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD------------------DEMGGEDFRDVNN 150
I GYA+QC++H+ V +EYR R + ++ G R N
Sbjct: 119 IVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNG 178
Query: 151 DSEDEEEDGIVYRTS-----TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
D I Y + + S K ES NTM SF+WWI+GFYWV +GG +L AP
Sbjct: 179 DYVRSVGHHIFYPDNFSVHKSACSIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAP 238
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+LYWL +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 239 QLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 286
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 164/262 (62%), Gaps = 35/262 (13%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL 231
K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 232 IGIALCCCLPCIIAILYAVAGQ 253
IGIA+CCCLPCIIAILYAV Q
Sbjct: 224 IGIAVCCCLPCIIAILYAVTDQ 245
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 164/262 (62%), Gaps = 35/262 (13%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACL 231
K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 232 IGIALCCCLPCIIAILYAVAGQ 253
IGIA+CCCLPCIIAILYAV Q
Sbjct: 224 IGIAVCCCLPCIIAILYAVTDQ 245
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 155/246 (63%), Gaps = 30/246 (12%)
Query: 20 PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSMLVRETAARELEERRADWGYS 71
P P+ P+ L L G R TG PS+ VRETAA LEER+ DW YS
Sbjct: 26 PTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAEHLEERQTDWAYS 85
Query: 72 KPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRN 131
KPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI GY LQCL+HV+ V +EYRRR
Sbjct: 86 KPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRR- 144
Query: 132 TRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFY 191
RR D E G++ + S K ES NTM SF+WWIVGFY
Sbjct: 145 -RRNADQEGAGDE--------------------DLKLSIVKHLESANTMFSFIWWIVGFY 183
Query: 192 WVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
WV +GG L AP+LYWL++VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV
Sbjct: 184 WVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVT 243
Query: 252 GQVHQR 257
QV Q
Sbjct: 244 DQVSQE 249
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 146/208 (70%), Gaps = 3/208 (1%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+++ E +R W
Sbjct: 4 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE---EEDGIVYRTS 165
+ GYALQC+VH+V V +EYR R +R R E+ + S + ED +
Sbjct: 64 VAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCT 123
Query: 166 TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFC 225
S K ES NTM SF+WWI+GFYW+ +GG+ +++ AP+LYWL +VFLAFDVFF +FC
Sbjct: 124 DCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFC 183
Query: 226 VVLACLIGIALCCCLPCIIAILYAVAGQ 253
V LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 184 VALACIIGIAVCCCLPCIIAILYAVSDQ 211
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 157/224 (70%), Gaps = 7/224 (3%)
Query: 36 ALLLGRATGRG-HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
A LL R R PS+LVRE AA LEER+ADW YS+PVVALD++WN AF+ V+A +L+
Sbjct: 45 AQLLRRGGRRAMREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLV 104
Query: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR-----VRDDEMGGEDFRDVN 149
++ +E +R W+ GYALQC++H+V V +EYR R+ +R DE G D +
Sbjct: 105 LSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRHGQRGGAGAAPADEERGSDGSSSS 164
Query: 150 NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
+D +D E D RT S K ES NTM SF+WWI+GFYW+ +GG+ +++ AP+LYW
Sbjct: 165 SDEDDRELDRHGRRTDY-ASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYW 223
Query: 210 LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
L +VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 224 LCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 267
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 146/209 (69%), Gaps = 15/209 (7%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R W
Sbjct: 59 PSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVLAASLTERPAVPLRFW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY LQCL+HV+ V +EY+RR R+ GG +D+ DG +
Sbjct: 119 LAGYVLQCLLHVLCVAVEYKRR----CREARSGGAGV------DQDDAGDG-----DLKI 163
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG L Q AP+LYWL++VFLAFDVFF +FCV L
Sbjct: 164 SIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVAL 223
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQVHQR 257
AC+IGIA+CCCLPCIIAILYAV QV Q
Sbjct: 224 ACVIGIAVCCCLPCIIAILYAVTDQVCQE 252
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/228 (52%), Positives = 154/228 (67%), Gaps = 12/228 (5%)
Query: 38 LLGRATGR--GHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLII 95
L RA+GR PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV+V+ A+L++
Sbjct: 46 FLRRASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVL 105
Query: 96 TINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVR-----DDEMGGEDFRDVNN 150
+ +E P +RLWI GYA+QC++H+V V +EYRRR ++ D +G +
Sbjct: 106 SASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVS 165
Query: 151 DSEDEEEDGIVYRTSTR-----TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
E Y + + TS K ES NTM SF+WWI+GFYWV +GG L Q +P
Sbjct: 166 SREGSASGSAQYVSLGQLDDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSP 225
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+LYWL ++FL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 226 QLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQ 273
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 151/228 (66%), Gaps = 30/228 (13%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L+++ E P +R+W
Sbjct: 75 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 134
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR-----------------------VRDDEMGGEDF 145
+ GYALQC++H+V V +EYRRRN RR + ++ +G
Sbjct: 135 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 194
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
V + S + + + +S K ES NTM SF+WWI+GFYWV +GG L Q +P
Sbjct: 195 SGVQDLS-------LGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 247
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
R+YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 248 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQ 295
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 151/228 (66%), Gaps = 30/228 (13%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LDI+WN AFV V+ A+L+++ E P +R+W
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR-----------------------VRDDEMGGEDF 145
+ GYALQC++H+V V +EYRRRN RR + ++ +G
Sbjct: 64 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 123
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
V + S + + + +S K ES NTM SF+WWI+GFYWV +GG L Q +P
Sbjct: 124 SGVQDLS-------LGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 176
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
R+YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 177 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQ 224
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 150/213 (70%), Gaps = 11/213 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LD++WN AFV+V+AA+L+++ E PS +R W
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGED--FRDVNNDSEDEEEDGIVYRT-- 164
I GYALQC++H+V V +EYRRR R G ED + S + D Y T
Sbjct: 122 IVGYALQCILHIVCVSVEYRRRRRRA---GVFGSEDDGIGSGGSYSSSPQGDSSQYVTLA 178
Query: 165 ----STRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
+ TS K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++FL FDVF
Sbjct: 179 SLGDESSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVF 238
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
F +FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 239 FVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 271
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 140/205 (68%), Gaps = 22/205 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L + E P+ +R+W
Sbjct: 63 PSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASTGESPAVPLRVW 122
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GY LQCL+H++ V +EYRRR +R + G EDF+
Sbjct: 123 IAGYVLQCLLHILCVTVEYRRR-SRDADQEGAGDEDFK---------------------L 160
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWIVGFYWV +GG L AP+LYWL++VFLAFDVFF +FCV L
Sbjct: 161 SVVKHLESANTMFSFIWWIVGFYWVSAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVAL 220
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCIIAILYAV Q
Sbjct: 221 ACVIGIAVCCCLPCIIAILYAVTDQ 245
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 144/205 (70%), Gaps = 15/205 (7%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R W
Sbjct: 59 PSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVLAASLTERPAVPLRFW 118
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
+ GY LQCL+HV+ V +EY+RR R+ GG +D+ DG +
Sbjct: 119 LAGYVLQCLLHVLCVAVEYKRR----CREARSGGAGV------DQDDAGDG-----DLKI 163
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG L Q AP+LYWL++VFLAFDVFF +FCV L
Sbjct: 164 SIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVAL 223
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCIIAILYAV Q
Sbjct: 224 ACVIGIAVCCCLPCIIAILYAVTDQ 248
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 151/219 (68%), Gaps = 14/219 (6%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LD++WN AFV+V+AA+L+++ E PS +R W
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR----VRDDEMGG----------EDFRDVNNDSED 154
I GYALQC++H+V V +EYRRR R DD +G + + V + D
Sbjct: 122 IVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVTLANVD 181
Query: 155 EEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVF 214
E S +S K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++F
Sbjct: 182 EHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIF 241
Query: 215 LAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
L FDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 242 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 280
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 146/205 (71%), Gaps = 6/205 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LD++WN AFV+V+AA+L+++ E PS +R W
Sbjct: 62 PSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYALQC++H+V V +EYRRR R G ED + S +S
Sbjct: 122 IVGYALQCILHIVCVSVEYRRRRRRA---GVFGSEDDGIGSGGSYSSS---PQGDSSQYV 175
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
+ K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++FL FDVFF +FCV L
Sbjct: 176 TVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVAL 235
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 236 ACVIGIAVCCCLPCIIAILYAVADQ 260
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 11/223 (4%)
Query: 36 ALLLGRATGRG---HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAM 92
A +L RA+ R PS+ VRE AA +LEER++DWGYSKPVV +D++W+ A VI++ +
Sbjct: 49 ARILRRASSRRMMLREPSVRVRENAAEQLEERQSDWGYSKPVVVIDVLWSLAIVIIAVGV 108
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRD-VNND 151
L +++ E+P R WI Y L C HVV V +EYR+R +R+ + D D ++
Sbjct: 109 LGLSLEEKPRVPFRAWIVAYILLCSCHVVCVVVEYRKRRNLGLRESGILSSDSGDSLDFS 168
Query: 152 SEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGG-DLLLQAAPRLYWL 210
++ E DG TS KR ES T S +WWI+GFYWV + G + + +P+LYWL
Sbjct: 169 TQQSENDG------QNTSVAKRVESAMTTFSIIWWIIGFYWVTTAGRQNVAKDSPQLYWL 222
Query: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+ FLA D F I C+ +ACLIGIA+CC LPCII ILYA+A Q
Sbjct: 223 CIAFLAADTLFVIICIAVACLIGIAVCCFLPCIIGILYAMADQ 265
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTS--- 165
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 166 ---------TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 265
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTR- 167
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 168 -----------TSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 265
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA +LEER++DW YSKPVV LD +WN AFV+V+ A+L+++ +E P+ +R+W
Sbjct: 49 PSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTS--- 165
I GY LQC++H+V V +EYRRRN+RR RD ++ S DEEE + R S
Sbjct: 109 IIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168
Query: 166 ---------TRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLA 216
SF K ES NTM SF+WW++GFYWV SGG L Q +P+LYWL +VFL
Sbjct: 169 YLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLG 228
Query: 217 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 229 FDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQ 265
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 23/212 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRE AA +LEER++ WGYSKP+V +D++ N AFVI++ +L +++ E+P +R+W
Sbjct: 5 PSVRVRENAAEQLEERQSGWGYSKPIVLIDVLRNLAFVIIAVGVLGLSLEEKPKVPLRVW 64
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRD---------DEMGGEDFRDVNNDSEDEEEDG 159
I GY LQCL HVV V +EYR+R + D +G R ND ED
Sbjct: 65 IVGYGLQCLCHVVCVVVEYRKRRNLGFEESGILSSGSGDSLGFGTHRS-GNDGED----- 118
Query: 160 IVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGG-DLLLQAAPRLYWLAVVFLAFD 218
+ KR ES +TM S +WW++GFYWV + G L + +P+LYWL V FLAFD
Sbjct: 119 -------TSRVPKRVESASTMVSVIWWVIGFYWVTAAGRQDLEENSPQLYWLCVTFLAFD 171
Query: 219 VFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
F I C ACLIGIA+CCCLPCII ILYA+
Sbjct: 172 ALFVIICAAAACLIGIAVCCCLPCIIGILYAM 203
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 142/205 (69%), Gaps = 25/205 (12%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE+AA +LE R++DW YSKPVV LD++WN AFV++S A+L+++ E+ T +R+W
Sbjct: 4 PSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVLLSLAVLVLSRKEKNCTELRIW 63
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRT 168
I GYALQC+VH++ V EY RR ++ + + ++
Sbjct: 64 IVGYALQCVVHMLCVCCEYLRRQQQQQQAN-------------------------ANSSL 98
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S+ KR ES NTM SF+WWIVGFYW+ +GG L AP +YWL VVFLAFDVFF +FCV L
Sbjct: 99 SWAKRLESANTMFSFVWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVAL 158
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 159 ACVIGIAVCCCLPCIIAILYAVADQ 183
>gi|110743179|dbj|BAE99481.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 180
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 114/167 (68%), Gaps = 6/167 (3%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNA---ARPATLALLLGRATGRGHGPSMLVRETAA 58
S SSD+ A D HAPLLRPR ++ ARP LA+LLGR TG PSMLVRETAA
Sbjct: 3 SYSSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGH-RAPSMLVRETAA 61
Query: 59 RELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLV 118
R LEERR DWGYSKPVVA DI+WN+A V+ SA ML+ T+ ERP+ IR+WIC Y LQCL
Sbjct: 62 RALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLF 121
Query: 119 HVVLVWMEYRRRN-TRRVRD-DEMGGEDFRDVNNDSEDEEEDGIVYR 163
HVVLVW EY RRN TRR RD + ED+ + +D +++ YR
Sbjct: 122 HVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYR 168
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 139/216 (64%), Gaps = 22/216 (10%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRE AA E+E R+ +W YSKPVVALDI WN +F++VS +L ++ E P +R+W
Sbjct: 53 PSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRVW 112
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRR---VRDDEMGGED--------FRDVNNDSEDEEE 157
I GY LQ LVH V V +E+RRR RR + DD+ E+ D + SE E E
Sbjct: 113 ILGYLLQGLVHSVCVVLEFRRR--RRGSYLEDDDSVLENGLRWSFSSESDSDFASEHESE 170
Query: 158 DGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAF 217
+ S K ES NT+ SF+WWI+GFYWV GG L + +P+LYWL + FLAF
Sbjct: 171 EN---------SIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAF 221
Query: 218 DVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
DV + CV +ACLIGIA+CCCLPCI+AILYAVA Q
Sbjct: 222 DVVIVVICVAVACLIGIAVCCCLPCILAILYAVADQ 257
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 141/220 (64%), Gaps = 18/220 (8%)
Query: 36 ALLLGRATGR--GHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A LGR R PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L
Sbjct: 47 ARFLGRTGSRRLMREPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
++ E PS +R+W+ GY LQCL HV+ V +EYRRR R
Sbjct: 107 AASLPESPSVPLRVWLAGYVLQCLFHVLCVTVEYRRRREARG----------------GG 150
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ G + S K ES NTM SF+WWI+GFYW+ +GG L AP+LYWL++V
Sbjct: 151 FGADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV Q
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 250
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 141/220 (64%), Gaps = 18/220 (8%)
Query: 36 ALLLGRATGR--GHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A LGR R PS+ VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L
Sbjct: 47 ARFLGRTGSRRLMREPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVL 106
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE 153
++ E PS +R+W+ GY LQCL HV+ V +EYRRR R
Sbjct: 107 AASLPESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRREARG----------------GG 150
Query: 154 DEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVV 213
+ G + S K ES NTM SF+WWI+GFYW+ +GG L AP+LYWL++V
Sbjct: 151 FGADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIV 210
Query: 214 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV Q
Sbjct: 211 FLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 250
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 118/187 (63%), Gaps = 26/187 (13%)
Query: 65 RADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW 124
R + YS P++ LD++WN AFV+VS +L T ERPST +RLWI GY LQCL+HV V+
Sbjct: 66 RENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVF 125
Query: 125 MEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL 184
EY+R M F D RT+ R S KR ES+NTM S +
Sbjct: 126 FEYQR---------SMAHHGFED---------------RTAHR-SIMKRLESMNTMTSSV 160
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
WW+ GFYW+V GG LLQ +PRLYWL VVFLAFD+FF +FC+ +AC+I +LCCC+P I+
Sbjct: 161 WWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIP-IV 219
Query: 245 AILYAVA 251
A YA+
Sbjct: 220 AFAYAMT 226
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 115/181 (63%), Gaps = 31/181 (17%)
Query: 70 YSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRR 129
+SKP+V LD++WN AFV VS +L+ T ERPS +R+WI GYALQCL+HV V ++RR
Sbjct: 71 FSKPIVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRR 130
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
RN G ED +S KR ES+NTM S +WW+ G
Sbjct: 131 RN---------GNED---------------------RHSSIVKRLESMNTMFSSVWWVFG 160
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
F W+++GG +L+Q +PRLYWLAVVFLAFDVFF +FC+ +AC+ AL CC+P + AI YA
Sbjct: 161 FCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYA 219
Query: 250 V 250
+
Sbjct: 220 M 220
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 115/182 (63%), Gaps = 29/182 (15%)
Query: 69 GYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYR 128
YS+ V+ LD++WN AFV+ +A +L+ T+ ERP+T +RLW+CGYA +C++H+ V+ E+R
Sbjct: 64 AYSRAVLVLDMVWNLAFVVAAAGVLLSTLRERPATPLRLWLCGYAFECVLHMAFVYFEFR 123
Query: 129 RRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIV 188
R+RD + T S K+ E +NT+AS +WW+
Sbjct: 124 ----TRIRDS------------------------FSHTTYSIVKKLEPMNTLASSVWWVF 155
Query: 189 GFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 248
GFYW+V GG LL+ +P LYWL VVFLAFDVFF IFC+ +AC++ AL C +P IIA+ Y
Sbjct: 156 GFYWIVVGGQALLEDSPHLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAY 214
Query: 249 AV 250
A+
Sbjct: 215 AM 216
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 113/179 (63%), Gaps = 26/179 (14%)
Query: 73 PVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT 132
P++ LD++WN AFV+VS +L T ERPST +RLWI GY LQCL+HV V+ EY+R
Sbjct: 2 PILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEYQR--- 58
Query: 133 RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYW 192
M F D RT+ R S KR ES+NTM S +WW+ GFYW
Sbjct: 59 ------SMAHHGFED---------------RTAHR-SIMKRLESMNTMTSSVWWVFGFYW 96
Query: 193 VVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
+V GG LLQ +PRLYWL VVFLAFD+FF +FC+ +AC+ +LCCC+P I+A YA+
Sbjct: 97 IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVXFFSLCCCIP-IVAFAYAMT 154
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 115/182 (63%), Gaps = 29/182 (15%)
Query: 69 GYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYR 128
YS+ V+ LD++WN AFV+V+A +L+ T+ ERPST +RLW+CGYA +C++H+ V+ E+R
Sbjct: 62 AYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFR 121
Query: 129 RRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIV 188
+RD + T S K+ E +NT+AS +WWI
Sbjct: 122 TG----IRDS------------------------FSHTAYSIVKKLEPMNTLASSVWWIF 153
Query: 189 GFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 248
GFYW+V G LL+ +PRLYWL VVFLAFDVFF IFC+ +AC++ AL C +P IIA+ Y
Sbjct: 154 GFYWIVVGDQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAY 212
Query: 249 AV 250
A+
Sbjct: 213 AM 214
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 111/172 (64%), Gaps = 14/172 (8%)
Query: 70 YSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRR 129
+ KP++ LD+ WN FV +S +L+++ E+P+ +R W+ GYA+QCL HV V++ Y R
Sbjct: 71 FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
R++R +G E N ++DE + + R KR E++NTM +++WW+ G
Sbjct: 131 RSSRY----RLGFE-----NRGAQDE-----LRLSHNRIRVMKRLEALNTMVAYIWWVFG 176
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 241
FYW+V GG LL+ +PRLYWLAVVFLAFDVFF IFC +A + A+CC +P
Sbjct: 177 FYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP 228
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 116/181 (64%), Gaps = 29/181 (16%)
Query: 70 YSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRR 129
YS+ V+ +D++WN AFV+V+AA+++ T NERPST +RLW+CGYA +CL+HV V+ E
Sbjct: 35 YSRAVLVVDMVWNLAFVVVAAAVILSTFNERPSTPLRLWLCGYAFECLLHVAFVFSE--- 91
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
FR DS + T S K+ E +NT+AS +WW+ G
Sbjct: 92 ---------------FRVTTRDS----------FSHTPYSIAKKLEPMNTLASSVWWVFG 126
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 249
FYW+V GG LL+ +PRLYWL VVFLAFDVFF IFC+ +AC++ AL C +P IIA+ YA
Sbjct: 127 FYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAYA 185
Query: 250 V 250
+
Sbjct: 186 L 186
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 126/222 (56%), Gaps = 38/222 (17%)
Query: 36 ALLLGRATGRG--HGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAML 93
A L RA+ R PSM VRETAA +LEER++DW YSKP+V LDI+WN AFV+V+ +L
Sbjct: 42 ARFLRRASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVL 101
Query: 94 IITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD--DEMGGEDFRDVNND 151
+++ +E PST +RLWI GY LQC++H+V + +EY+RR + GG +++
Sbjct: 102 VMSRDETPSTPLRLWIIGYGLQCVLHMVCICVEYKRRRHLASSGAVERSGGWGSGHLSSS 161
Query: 152 SEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
S +E D I YR R L
Sbjct: 162 SGSDEGDPIDYRVEVRNRVEDETR----------------------------------LC 187
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+VFLAFDVFF + CV +AC+IGIA+CCCLPCIIAILY VA Q
Sbjct: 188 IVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQ 229
>gi|414884509|tpg|DAA60523.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 209
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 123/217 (56%), Gaps = 35/217 (16%)
Query: 2 SSSSDAAARSDSHAPLLR--PRDPSVSPNAARPATLALLLG-----RATGRGH---GPSM 51
SS D+A+ S APL+ P P+ P+ L L G R TG PS+
Sbjct: 9 SSGGDSASPS---APLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSV 65
Query: 52 LVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICG 111
VRETAA LEER+ DW YSKPVV LD++WN AFV V+AA+L ++ ERP+ +R+WI G
Sbjct: 66 AVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVG 125
Query: 112 YALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFT 171
Y LQCL+HV+ V +EYRRR RR D E G++ + S
Sbjct: 126 YVLQCLLHVLSVTVEYRRR--RRNADQEGAGDE--------------------DLKLSIV 163
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLY 208
K ES NTM SF+WWIVGFYWV +GG L AP+LY
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLY 200
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 31/159 (19%)
Query: 92 MLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNND 151
+L+ T ERPS +R+WI GYALQCL+HV V ++RRRN G ED
Sbjct: 3 VLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRRRN---------GNED------- 46
Query: 152 SEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
+S KR ES+NTM S +WW+ GF W+++GG +L+Q +PRLYWLA
Sbjct: 47 --------------RHSSIVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRLYWLA 92
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAV 250
VVFLAFDVFF +FC+ +AC+ AL CC+P + AI YA+
Sbjct: 93 VVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYAM 130
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 69/74 (93%)
Query: 180 MASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
M SFLWWI+GFYWVVSGGD+L Q APRLYWL+VVFLAFDVFFA+FCV +AC IGIALCCC
Sbjct: 1 MVSFLWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCC 60
Query: 240 LPCIIAILYAVAGQ 253
LPC+IAILYA+AGQ
Sbjct: 61 LPCVIAILYALAGQ 74
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 67/85 (78%)
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG L AP+LYWL +VFLAFDVFF +FC+ L
Sbjct: 3 SIVKHLESANTMFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCIAL 62
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCII ILYAV Q
Sbjct: 63 ACVIGIAVCCCLPCIIGILYAVTDQ 87
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 101/158 (63%), Gaps = 12/158 (7%)
Query: 105 IRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGED---------FRDVNNDSEDE 155
+R WI GYALQC++H+V V +EYRRR R G ED DS
Sbjct: 3 LRFWIVGYALQCILHIVCVSVEYRRRRRRA---GVFGSEDDGIGSGGSYSSSPQGDSSQY 59
Query: 156 EEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFL 215
+ S+ +S K ES NTM SF+WWI+GFYWV +GG L + +P+LYWL ++FL
Sbjct: 60 VTLASLGDESSTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFL 119
Query: 216 AFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
FDVFF +FCV LAC+IGIA+CCCLPCIIAILYAVA Q
Sbjct: 120 GFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQ 157
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 104/152 (68%), Gaps = 3/152 (1%)
Query: 105 IRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDE---EEDGIV 161
+R W+ GYALQC+VH+V V +EYR R +R R E+ + S + ED
Sbjct: 3 LRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRR 62
Query: 162 YRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF 221
+ S K ES NTM SF+WWI+GFYW+ +GG+ +++ AP+LYWL +VFLAFDVFF
Sbjct: 63 GSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFF 122
Query: 222 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
+FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 123 VVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 154
>gi|224071764|ref|XP_002303570.1| predicted protein [Populus trichocarpa]
gi|222841002|gb|EEE78549.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRETAA +LEER++DW YSKPVV LDI+WN AFV V+A +L+++ E P +RLW
Sbjct: 73 PSMLVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVAVAAGVLVLSRKENPGVPLRLW 132
Query: 109 ICGYALQCLVHVVLVWMEY 127
I GY LQC++H+V V +EY
Sbjct: 133 ILGYGLQCVLHMVCVCVEY 151
>gi|361066493|gb|AEW07558.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA++LEER++DW YSKPVV LDI+WN +FV+VS +L T++ERP+T +R+W
Sbjct: 49 PSMLVRENAAQQLEERQSDWAYSKPVVILDILWNLSFVVVSVVILSSTLDERPTTPLRIW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRR 130
I GYALQC++H++ V EY RR
Sbjct: 109 IAGYALQCILHMIYVAYEYIRR 130
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 73/101 (72%)
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
ED E R K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +
Sbjct: 18 EDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCI 77
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
VFLAFDVFF +FCV LAC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 78 VFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 118
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 72/85 (84%)
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVL 228
S K ES NTM SF+WWI+GFYWV +GG++L + AP+LYWL +VFLAFDVFF +FCV L
Sbjct: 8 SIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVAL 67
Query: 229 ACLIGIALCCCLPCIIAILYAVAGQ 253
AC+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 68 ACIIGIAVCCCLPCIIAILYAVSDQ 92
>gi|218191343|gb|EEC73770.1| hypothetical protein OsI_08445 [Oryza sativa Indica Group]
Length = 213
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 170 FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
K ES NTM SF+WWI+GFYWV +GG +L AP+LYWL +VFLAFDVFF +FCV LA
Sbjct: 74 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 133
Query: 230 CLIGIALCCCLPCIIAILYAVAGQ 253
C+IGIA+CCCLPCIIAILYAV+ Q
Sbjct: 134 CIIGIAVCCCLPCIIAILYAVSDQ 157
>gi|361066495|gb|AEW07559.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA++LEER++DW YSKPV+ LDI+WN +FV+VS +L T++ERP+T +R+W
Sbjct: 49 PSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRIW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRR 130
I GYALQC++H+ V EY RR
Sbjct: 109 IVGYALQCILHMSYVAYEYIRR 130
>gi|383156391|gb|AFG60447.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156392|gb|AFG60448.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156393|gb|AFG60449.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156394|gb|AFG60450.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156395|gb|AFG60451.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156396|gb|AFG60452.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156397|gb|AFG60453.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156398|gb|AFG60454.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156399|gb|AFG60455.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156400|gb|AFG60456.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156401|gb|AFG60457.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156402|gb|AFG60458.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156403|gb|AFG60459.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156404|gb|AFG60460.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156405|gb|AFG60461.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156406|gb|AFG60462.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156407|gb|AFG60463.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156408|gb|AFG60464.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PSMLVRE AA++LEER++DW YSKPV+ LDI+WN +FV+VS +L T++ERP+T +R+W
Sbjct: 49 PSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRIW 108
Query: 109 ICGYALQCLVHVVLVWMEYRRR 130
I GYALQC++H+ V EY RR
Sbjct: 109 IVGYALQCILHMSYVAYEYIRR 130
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Query: 120 VVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEE---EDGIVYRTSTRTSFTKRCES 176
+V V +EYR R +R R E+ + S ++ ED + S K ES
Sbjct: 1 MVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVSIAKHLES 60
Query: 177 INTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 236
NTM SF+WWI+GFYW+ +GG+ +++ AP+LYWL +VFLAFDVFF +FCV LAC+IGIA+
Sbjct: 61 ANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAV 120
Query: 237 CCCLPCIIAILYAVAGQ 253
CCCLPCIIAILYAV+ Q
Sbjct: 121 CCCLPCIIAILYAVSDQ 137
>gi|308081813|ref|NP_001182980.1| uncharacterized protein LOC100501295 [Zea mays]
gi|238008582|gb|ACR35326.1| unknown [Zea mays]
Length = 167
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPV+ +D++WN AFV ++AA++ ++ E P+ +R+W
Sbjct: 62 PSVAVRETAAEHLEERQTDWAYSKPVIVVDMLWNVAFVAIAAAVVAASLGEIPAVPLRVW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR 146
I GY LQCL+H++ V +EYRRR RR D E G DF+
Sbjct: 122 IAGYVLQCLLHILCVTVEYRRR--RRDADQEGVGVDFK 157
>gi|223972729|gb|ACN30552.1| unknown [Zea mays]
Length = 166
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
Query: 49 PSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLW 108
PS+ VRETAA LEER+ DW YSKPVV +D++WN AFV ++AA+L ++ E P+ +R+W
Sbjct: 62 PSVAVRETAAEHLEERQTDWAYSKPVVVVDMLWNVAFVAIAAAVLAASLGESPAVPLRVW 121
Query: 109 ICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFR 146
I GY LQCL+H++ V +EYRRR RR ++ G EDF+
Sbjct: 122 IAGYVLQCLLHILCVTVEYRRR--RRTQEG-AGVEDFK 156
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 48/50 (96%)
Query: 204 APRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
APRLYWL+VVFLAFDVFFA+FCV +AC IGIALCCCLPC+IAILYA+AGQ
Sbjct: 2 APRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQ 51
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 56/68 (82%)
Query: 186 WIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 245
WI+GFYWV +GG L +P+LYWL +VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 246 ILYAVAGQ 253
ILYAV Q
Sbjct: 61 ILYAVTDQ 68
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 45/268 (16%)
Query: 10 RSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRAD-W 68
R+D H+ + ++ N +PA A T P + R +A+ RR D +
Sbjct: 48 RNDQHSEM------HLTQNQDQPAGDAQDSSHQTTSSSAPRLNSRNSASL----RRGDGY 97
Query: 69 GYSKPVVALDIMWNSAFVIVSAAMLIITI-------NERPSTRIRLWICGYALQCLVHVV 121
G+ +W S ++V+ + +I +I NE P + WI GY C+ +
Sbjct: 98 GHRGRSPLNSGLWISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLP 157
Query: 122 LVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSE----------DEEEDGIVYRTSTRTS-- 169
+++ +R RN +D + N +EE+G ++++R +
Sbjct: 158 ILYWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIM 217
Query: 170 ---FTKRCESINTMASF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDV 219
FT R + +W++VG W+ GG AP+LY L +VFL F
Sbjct: 218 PGAFTSRLNGLVDHFKMALDCFFAVWFVVGNVWIF-GGHTSPSDAPQLYRLCIVFLTFSC 276
Query: 220 FFAIFCVVLACLIGIALCCCLPCIIAIL 247
+L I CCCLPCII++L
Sbjct: 277 IGYAMPFILCATI----CCCLPCIISVL 300
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I S +L ++ NE P + WI GYA C+ + +++ +R RN
Sbjct: 111 ISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSN 170
Query: 135 VRDDEMG----------GEDFRDVNNDSEDEEEDGIVYRTSTRTS-----FTKRCESINT 179
+D + ++ +EE+G R+++R + FT R +
Sbjct: 171 EQDTSQASQGSSGSNPPDRSYNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVD 230
Query: 180 MASF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+W++VG W+ GG AP+LY L +VFL F +L I
Sbjct: 231 HFKMALDCFFAVWFVVGNVWIF-GGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATI 289
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII++L
Sbjct: 290 ----CCCLPCIISVL 300
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 58 ARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITI-------NERPSTRIRLWIC 110
+R R D G+ +P W S +IVS + +I I NE P + W+
Sbjct: 64 SRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLI 123
Query: 111 GYALQC---LVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV-------------NNDSED 154
GY + C L H+ ++ R+NT + +++ E RDV ++ D
Sbjct: 124 GYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSE--RDVYEPNSYVVVSSAHGSEVVD 181
Query: 155 EEEDGIVYR-TSTRTSFTKRCESINTMASF-LWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+G V R S R C + F +W++VG W+ GG L AP LY L +
Sbjct: 182 SGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIF-GGRTSLHDAPNLYRLCI 240
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
VFLAF +L +I CCCLPCII+++
Sbjct: 241 VFLAFGFIGYALPFILCTMI----CCCLPCIISMM 271
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 37/201 (18%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++I++ ++ ++ S +L ++ +E+P T + W+ GYA C + +++ Y RRN
Sbjct: 112 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRN--- 168
Query: 135 VRDDEMG-GEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT-------------- 179
D E G + + S E + + + TR++ + +T
Sbjct: 169 -HDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNAR 227
Query: 180 ---MASF----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
+A + +W++VG W+ GG AAP LY L +VFL F
Sbjct: 228 LSVLADYYKMALDCFFAVWFVVGNVWIF-GGHSSFTAAPNLYRLCIVFLTFSCIGYAMPF 286
Query: 227 VLACLIGIALCCCLPCIIAIL 247
+L +I CCCLPCII+IL
Sbjct: 287 ILCAMI----CCCLPCIISIL 303
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 37/201 (18%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++I++ ++ ++ S +L ++ +E+P T + W+ GYA C + +++ Y RRN
Sbjct: 92 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRN--- 148
Query: 135 VRDDEMG-GEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINT-------------- 179
D E G + + S E + + + TR++ + +T
Sbjct: 149 -HDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNAR 207
Query: 180 ---MASF----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
+A + +W++VG W+ GG AAP LY L +VFL F
Sbjct: 208 LSVLADYYKMALDCFFAVWFVVGNVWIF-GGHSSFTAAPNLYRLCIVFLTFSCIGYAMPF 266
Query: 227 VLACLIGIALCCCLPCIIAIL 247
+L +I CCCLPCII+IL
Sbjct: 267 ILCAMI----CCCLPCIISIL 283
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + +I S +L ++ +E P + WI GYA C+ + +++ +R RN
Sbjct: 109 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 168
Query: 135 VRDDEM-----------GGEDFR-DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
++ GG F V SE+E+ V T S + + +
Sbjct: 169 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 228
Query: 183 F----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+ +W++VG W+ GG AP LY L +VFL F +L I
Sbjct: 229 YFKMALDCFFAVWFVVGNVWIF-GGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATI 287
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII+IL
Sbjct: 288 ----CCCLPCIISIL 298
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + +I S +L ++ +E P + WI GYA C+ + +++ +R RN
Sbjct: 89 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 148
Query: 135 VRDDEM-----------GGEDFR-DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
++ GG F V SE+E+ V T S + + +
Sbjct: 149 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 208
Query: 183 F----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+ +W++VG W+ GG AP LY L +VFL F +L I
Sbjct: 209 YFKMALDCFFAVWFVVGNVWIF-GGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATI 267
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII+IL
Sbjct: 268 ----CCCLPCIISIL 278
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + ++ S +L ++ +E P + WI GYA C+ + L++ YR RN
Sbjct: 109 ISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSL 168
Query: 135 VRDDEMGGEDFRDV-------------NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMA 181
+D + + N++S+D R S R + +
Sbjct: 169 EQDSAQNHQGSAHINVPAGPFSLSVSRNSESDDRRSATTSPRGSQNAVLNARLKVLVEYF 228
Query: 182 SF-------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
+W++VG W+ GG + AP LY L +VFL F +L I
Sbjct: 229 KMALDCFFAVWFVVGNVWIF-GGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATI-- 285
Query: 235 ALCCCLPCIIAIL 247
CCCLPCII++L
Sbjct: 286 --CCCLPCIISVL 296
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + ++ S +L ++ +E+P + +W+ GYA CL + L++ Y RN
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRNGTT 138
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRT-STRTSFTKRCESINTMASF---------- 183
D+ + +S G Y + ++ T+ ES +
Sbjct: 139 QAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVESRARVGRLVEKFKIALDC 198
Query: 184 ---LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
+W++VG W+ GG + AP LY L +VFL F +L I CCCL
Sbjct: 199 FFAVWFVVGNVWIF-GGHSSSREAPNLYRLCIVFLTFSCIGYAMPFILCATI----CCCL 253
Query: 241 PCIIAILYAVAGQVHQR 257
PCIIA+L Q R
Sbjct: 254 PCIIALLGFREEQAQNR 270
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + ++ S +L ++ +E P T + WI GYA C + L++ Y N R
Sbjct: 116 ISIELVLLVSQIVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWRYYHHNHMR 175
Query: 135 VR------------DDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ +D G F N ED + R++ + R + T+
Sbjct: 176 EQDSSQSRQSSPRINDPSGTLLFSSRTNSGEDGQAAVASSRSNQASLLMNR--RMKTLVE 233
Query: 183 F----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+ +W++VG W+ GG ++ AP LY L +VFLAF +L I
Sbjct: 234 YFKISLDCFFAVWFVVGNVWIF-GGHSSVEEAPNLYRLCIVFLAFSCIGYAMPFILCSTI 292
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII+IL
Sbjct: 293 ----CCCLPCIISIL 303
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I S +L ++ NE P + W+ GYA C+ + +++ +R RN
Sbjct: 108 ISIELFVTVGQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSG 167
Query: 135 VRDDEMGGEDFRDVNND----------SEDEEEDGIVYRTSTRTSFTKRCES--INTMAS 182
+D + N ++ EED + T R S +N +
Sbjct: 168 QQDSHQSHQGSSQNNPPDTSSYTAISVTQASEEDNFRSELAIANGQTGRPLSSRLNGLMD 227
Query: 183 F----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
+W++VG W+ GG AP+LY L +VFL F +L I
Sbjct: 228 HFKMALDCFFAVWFVVGNVWIF-GGHSTPTDAPKLYKLCIVFLTFSCIGYAMPFILCATI 286
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII++L
Sbjct: 287 ----CCCLPCIISLL 297
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 64 RRADWGYSK-PV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCL 117
RR D S+ PV ++++++ + ++ S +L ++ NE P T + WI GYA C+
Sbjct: 75 RRGDARRSRSPVHSGLWISIELVLLVSQIVASIVVLSLSRNEHPQTPLFQWIVGYASGCV 134
Query: 118 VHVVLVWMEYRRRNTRRVRDDEMGGE----------DFRDVNNDSEDEEEDGIVYRTSTR 167
+ L++ Y N R +D + F ++ ++ D + S +
Sbjct: 135 ATLPLLFWRYYNHNHLREQDSAQSRQTSPRISDPSGTFLSISRNNGDAGQAAAASSRSNQ 194
Query: 168 TS--FTKRCE------SINTMASF-LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFD 218
TS +R + I+ F +W++VG W+ GG AP LY L +VFLAF
Sbjct: 195 TSILMNRRMKILVEYFKISLDCFFAVWFVVGNVWIF-GGRSSAAVAPNLYRLCIVFLAFS 253
Query: 219 VFFAIFCVVLACLIGIALCCCLPCIIAIL 247
+L I CCCLPCII+IL
Sbjct: 254 CIGYAMPFILCSTI----CCCLPCIISIL 278
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I S +L ++ E P + WI GYA C+ + L++ Y RN
Sbjct: 107 ISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQAL 166
Query: 135 VRDDEMGGEDFRDV-------------NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMA 181
+D + + N++ ED R R E +
Sbjct: 167 EQDSAQNHQGSAHINVPAGPFSLSVSRNSEGEDRRSATTSPRGGQNAVLNARYELKVLLE 226
Query: 182 SF---------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
F +W++VG W+ G + AP LY L +VFL F +L I
Sbjct: 227 YFKMALDCFFAVWFVVGNVWIF-GSHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATI 285
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII+IL
Sbjct: 286 ----CCCLPCIISIL 296
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 33/197 (16%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + ++ S +L ++ +E P T + WI GYA C + L++ Y N +
Sbjct: 115 ISIELVLLLSQIVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQ 174
Query: 135 VRDDEMGGEDFRDVNNDS--------EDEEEDGIVYRTSTRTS-----FTKRCESIN--- 178
++ + +N+ S + EDG S+R++ +R +++
Sbjct: 175 EQESSQSRQTSPRINDPSGTLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYF 234
Query: 179 --TMASF--LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFD-VFFA---IFCVVLAC 230
++ F +W++VG W+ GG AP LY L +VFLAF + +A IFC
Sbjct: 235 KISLDCFFAVWFVVGNVWIF-GGHSSANEAPNLYRLCIVFLAFSCIGYAMPFIFCST--- 290
Query: 231 LIGIALCCCLPCIIAIL 247
+CCCLPCII+IL
Sbjct: 291 -----ICCCLPCIISIL 302
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 29/195 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + +I + A+L ++ NE P + W+ GY + C+ + ++ Y RN +
Sbjct: 88 ISIELIVNVSQIIAAIAVLSVSRNEHPRAPLFEWVVGYIIGCVATIPHLYWRYLHRNCQN 147
Query: 135 VRDDE-MGGEDFRDVNND-----------SEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ + G R+++ SE ED +R +F + + +
Sbjct: 148 IEQEPTTQGSSQRNISESDSFAPISSARASEVGNEDNST--GVSRNNFPIASPRVYALIA 205
Query: 183 FL----------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLI 232
L W++VG W+ GG + AP LY L +VFL F +L +I
Sbjct: 206 CLKLALDCFFAVWFVVGNVWIF-GGRSSVHDAPNLYRLCIVFLTFGFIGYALPFILCTMI 264
Query: 233 GIALCCCLPCIIAIL 247
CCCLPCII+++
Sbjct: 265 ----CCCLPCIISMV 275
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ E P + W+ GY + C + ++ Y RN
Sbjct: 90 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 149
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF----------L 184
++ NN +E R + R + IN + +
Sbjct: 150 GENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLAN-PRINALFDHFKMALDCFFAV 208
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
W++VG W+ GG AP LY L +VFL F +L +I CCCLPCII
Sbjct: 209 WFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCII 263
Query: 245 AIL 247
+++
Sbjct: 264 SVM 266
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 30/208 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + ++ S +L ++ +E+P + +W+ GYA CL + L++ Y RN
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRNGTT 138
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVY------RTSTRT------SFTKRCESINTMAS 182
D+ + +S G Y ST S + +S + +
Sbjct: 139 QAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVEPRARSRGRDVDSASDNSG 198
Query: 183 FL-------------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLA 229
+ W++VG W+ GG + AP LY L +VFL F +L
Sbjct: 199 LVEKFKIALDCFFAVWFVVGNVWIF-GGHSSSREAPNLYRLCIVFLTFSCIGYAMPFILC 257
Query: 230 CLIGIALCCCLPCIIAILYAVAGQVHQR 257
I CCCLPCIIA+L Q R
Sbjct: 258 ATI----CCCLPCIIALLGFREEQAQNR 281
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 27/194 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + A+L ++ NE P + W+ GY + C+ + ++ Y RN R
Sbjct: 88 ISIELIVNLSQIVAAIAVLSVSRNEHPHAPLFTWLLGYTIGCIAILPHLYWRYLHRN-RP 146
Query: 135 VRDDEMGGEDFRDVNNDSED-----------EEEDGIVYRTSTRTSFTKRCESINTM-AS 182
+ EM + + N + E DG +R + M A
Sbjct: 147 NMEQEMTPQSLSERNMSETNSYAAVSSPRTSEAVDGTNSTGVSRMNLPLASPRFYAMVAC 206
Query: 183 F---------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
F +W++VG W+ G AP LY + +VFLAF +L +I
Sbjct: 207 FKLMLDCFFAVWFVVGNVWIF-GSRSSAHDAPNLYRICIVFLAFGFIVYALPFILCTMI- 264
Query: 234 IALCCCLPCIIAIL 247
CCCLPCII+IL
Sbjct: 265 ---CCCLPCIISIL 275
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDV----NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF------- 183
++ + + + +++ + GIV + C ++ +A
Sbjct: 150 DQEPQQPPTTYPTLIPSQSSEGRNHRTSGIVLHLGC---ISISCPRLSVLAYHFKTGVDC 206
Query: 184 ---LWWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALC 237
+W++VG W+ G + Q AP +Y L + FLA V +AI ++ A A+C
Sbjct: 207 FFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AIC 261
Query: 238 CCLPCIIAIL 247
CC PC+I++L
Sbjct: 262 CCFPCLISVL 271
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 21/185 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
V++++ + +I S +L+++ NE P + +W+ GYA CL + L++ Y + R
Sbjct: 13 VSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRT 72
Query: 135 VRDDEMGGED------------FRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ + + S D+ G R+ F +
Sbjct: 73 REPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFA--- 129
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W++VG W+ GG AP LY L +V L F +L I CCCLPC
Sbjct: 130 -IWFVVGNVWIF-GGHSAAHDAPNLYRLCIVLLTFSCIGYAMPFILCATI----CCCLPC 183
Query: 243 IIAIL 247
IIA+L
Sbjct: 184 IIALL 188
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 26/194 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT-- 132
++++++ + +I + +L ++ NE+P + WI GYA C + L++ YR RN
Sbjct: 109 ISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQAS 168
Query: 133 ---------RRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF 183
R + G V+ SE EE + + +
Sbjct: 169 EQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEY 228
Query: 184 ----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 229 FKMGLDCFFAVWFVVGNVWIF-GGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILC---- 283
Query: 234 IALCCCLPCIIAIL 247
+ +CCCLPCII+IL
Sbjct: 284 VTICCCLPCIISIL 297
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 21/185 (11%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
V++++ + +I S +L+++ NE P + +W+ GYA CL + L++ Y + R
Sbjct: 13 VSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRT 72
Query: 135 VRDDEMGGED------------FRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMAS 182
+ + + S D+ G R+ F +
Sbjct: 73 REPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFA--- 129
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W++VG W+ GG AP LY L +V L F +L I CCCLPC
Sbjct: 130 -IWFVVGNVWIF-GGHSAAHDAPNLYRLCIVLLTFSCIGYAMPFILCATI----CCCLPC 183
Query: 243 IIAIL 247
IIA+L
Sbjct: 184 IIALL 188
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+ ++++ + ++ S +L ++ +E P + WI GYA C+ + L++ +R + R
Sbjct: 64 ICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLY--WRYYHNRG 121
Query: 135 VRDDEMGGEDFRDVNND------SEDEEEDGIVYRTSTRTSFTKRCESINTMASFL---- 184
VR+ E R +ND S+ G S+RT + +N L
Sbjct: 122 VREQESSQASPR--SNDPSGTLLSDSTTNGGEDAPASSRTRSNQESWLMNARLKLLVEYF 179
Query: 185 ----------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
W++VG W+ GG AP LY L VVFL F +L I
Sbjct: 180 KIAVDCFFAIWFVVGNVWIF-GGHSSADQAPNLYRLCVVFLTFSCIGYAMPFILCATI-- 236
Query: 235 ALCCCLPCIIAIL 247
CCCLPCII+IL
Sbjct: 237 --CCCLPCIISIL 247
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 27/194 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I + ++L ++ NE P + W+ GY + C+ + L++ Y RN R
Sbjct: 100 ISVELIVTVSQIIAAISVLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRYIHRN-RL 158
Query: 135 VRDDEMGGEDF-----RDVNNDSEDE----EEDGIVYRTS--TRTSFTKRCESINTMASF 183
E ++F + N+ +E E G V T+ ++ + R + A
Sbjct: 159 TTGQESASQNFPPNSIPEANSFTESSASRISEAGHVTGTNGVSQNNTITRNPRVQAYADH 218
Query: 184 ----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG W+ GG AP LY L + FL F +L LI
Sbjct: 219 FRMALDCFFAVWFVVGNVWIF-GGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALI- 276
Query: 234 IALCCCLPCIIAIL 247
CCCLPCII+++
Sbjct: 277 ---CCCLPCIISLM 287
>gi|413947493|gb|AFW80142.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 459
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 39 LGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITIN 98
L R +GR GPSMLV E AA +L+ RR DW +S+PV+ALDI WN AF +AAML +
Sbjct: 106 LPRTSGR-RGPSMLVHEMAALQLQRRRVDWAHSRPVLALDIAWNVAFTAAAAAMLSSSAE 164
Query: 99 ERPSTRIRLWI 109
E P + LW+
Sbjct: 165 ESPIKPLHLWV 175
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 57 AARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
AA +L+ RR DW +S+PV+ALDI WN AF +AAML + E P + LW+
Sbjct: 2 AALQLQRRRVDWAHSRPVLALDIAWNVAFAATAAAMLSSSAEESPIKPLHLWV 54
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTS----TRTSFTKRCESINTMASF------- 183
D+ + + + +G +RTS + C ++ +A
Sbjct: 150 ---DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDC 206
Query: 184 ---LWWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALC 237
+W++VG W+ G + Q AP +Y L + FLA V +AI ++ A A+C
Sbjct: 207 FFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AIC 261
Query: 238 CCLPCIIAIL 247
CC PC+I++L
Sbjct: 262 CCFPCLISVL 271
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + +I + +L ++ NE P + + W+ GY + C + ++ Y RN
Sbjct: 99 ISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNLPT 158
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCE-SINT-MASF--------- 183
+ V N + + Y + ++ E ++N +F
Sbjct: 159 TGQEPT-------VQNIPPNNTPEANSYGVTGTNGVSRNNEATVNPRFQAFADHFKMALD 211
Query: 184 ----LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 239
+W++VG WV GG AP LY L + FL F +L LI CCC
Sbjct: 212 CFFAVWFVVGNVWVF-GGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALI----CCC 266
Query: 240 LPCIIAIL 247
LPCII+IL
Sbjct: 267 LPCIISIL 274
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 31/238 (13%)
Query: 31 RPATLALLLGRATGRGHGPSMLVRETAARELEERRADWG--YSKPV-----VALDIMWNS 83
RP+T AL GP + AR R ++G + P+ ++++++ N
Sbjct: 48 RPSTRALTSALQPPAAVGPPHAGNTSGAR----RGDNYGRRHRSPLNSGLWISIEVIVNV 103
Query: 84 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDE---- 139
+ ++ + +L ++ E P + W+ GY + C + ++ Y RN +++
Sbjct: 104 SQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEQAHSL 163
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF----------LWWIVG 189
G ++ + + RT+ R + IN + +W++VG
Sbjct: 164 QGSSQSQNNSTEPTHAASASERRRTAARNAVLAN-PRINALFDHFKMALDCFFAVWFVVG 222
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
W+ GG AP LY L +VFL F +L +I CCCLPCII+++
Sbjct: 223 NVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCIISVM 275
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 38/201 (18%)
Query: 64 RRADWGYSK----PV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYAL 114
RR+D GYS+ P+ ++++++ + +I S +L ++ +E P + W+ GYA
Sbjct: 89 RRSD-GYSRRRRSPLNSGLWISVELVVTVSQIIASIVVLSLSRHENPRAPLFAWVVGYAS 147
Query: 115 QCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTST-----RTS 169
C + +++ YR RN VN SE G R S R
Sbjct: 148 GCFATLPILYWRYRTRN------------QTISVNQASETA---GAATRRSRFVGIFRMR 192
Query: 170 FTKRCESIN-TMASFL--WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCV 226
F+ + + F W++VG W+ GG AP+LY L +VFL F
Sbjct: 193 FSGMVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF 251
Query: 227 VLACLIGIALCCCLPCIIAIL 247
+L I CCCLPCII+IL
Sbjct: 252 ILCATI----CCCLPCIISIL 268
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ E P + W+ GY + C + ++ Y RN
Sbjct: 34 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 93
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF----------L 184
++ NN +E R + R + IN + +
Sbjct: 94 GENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLAN-PRINALFDHFKMALDCFFAV 152
Query: 185 WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
W++VG W+ GG AP LY L +VFL F +L +I CCCLPCII
Sbjct: 153 WFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCII 207
Query: 245 AIL 247
+++
Sbjct: 208 SVM 210
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 24/192 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR---- 130
+++++ N + +I + +L ++ NE P + W+ GY + C+ + ++ Y +R
Sbjct: 90 ISIELAVNLSQIIAAICVLSVSKNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLA 149
Query: 131 -----NTRRVRDDEMGGEDFRDVNNDSEDEE----------EDGIVYRTSTRTSFTKRCE 175
N V D+ F ++ E + +V +F +
Sbjct: 150 TVQGSNQNYVPDNSFESSSFTGISPPPVSEAGVVTVSNGVLRNNVVITNPRAQAFADHFK 209
Query: 176 SINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 235
+W++VG WV GG AP LY L + FL F +L LI
Sbjct: 210 MALDCFFAVWFVVGNVWVF-GGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALI--- 265
Query: 236 LCCCLPCIIAIL 247
CCCLPCII+++
Sbjct: 266 -CCCLPCIISLM 276
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I + +L ++ +E P + WI GYA C+ + L++ Y N
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 VRDDEMGGEDFRDVN--------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF--- 183
+D G+ ++N + S E DG +T+T +S R + A
Sbjct: 173 EQD---SGQHRPNLNVAAGPFAFSISRTSEGDG--RQTNTTSSRVSRYPGFISAARLKVI 227
Query: 184 -------------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLAC 230
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 228 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCT 286
Query: 231 LIGIALCCCLPCIIAIL 247
I CCCLPCII+IL
Sbjct: 287 TI----CCCLPCIISIL 299
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ ++ L I+ ERP +R+W+ GY + C+++++L++ YR+ + D + D
Sbjct: 97 ITITTFTLAISKRERPIWPMRIWVSGYDIGCVLNLLLLYGRYRQ--IYLTQGDSLSLSDI 154
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAA 204
N+ E TR S +C + + +W+++G WV A
Sbjct: 155 EQQRNNEE------------TRMSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHHA 202
Query: 205 PRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
P+L+ L ++ LA++ C L+ + LCCC+P I +L
Sbjct: 203 PKLHVLCIILLAWNA----MCYSFPFLLFVLLCCCVPLISTLL 241
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 27/194 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ + +I + +L ++ E P + + W+ GY + C+ + L++ Y RN R
Sbjct: 100 ISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRN-RP 158
Query: 135 VRDDEMGGEDF---------RDVNNDSEDEEEDGIVYRTS--TRTSFTKRCESINTMASF 183
E ++F + + E G V T+ ++ + R A
Sbjct: 159 TTGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNMLTRNPRAQVYADH 218
Query: 184 ----------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
+W++VG WV GG AP LY L + FL F +L LI
Sbjct: 219 FRMALDCFFAVWFVVGNVWVF-GGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALI- 276
Query: 234 IALCCCLPCIIAIL 247
CCCLPCII+++
Sbjct: 277 ---CCCLPCIISLM 287
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I + +L ++ +E P + WI GYA C+ + L++ Y N
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 VRDDEMGGEDFRDVN--------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF--- 183
+D G+ ++N + S E DG +T+T +S R + A
Sbjct: 173 EQDS---GQHRPNLNVAAGPFAFSISRTSEADG--RQTNTTSSRGSRYPGFISAARLKVI 227
Query: 184 -------------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLAC 230
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 228 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCT 286
Query: 231 LIGIALCCCLPCIIAIL 247
I CCCLPCII+IL
Sbjct: 287 TI----CCCLPCIISIL 299
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 24/192 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR---- 130
+++++ N + +I + +L ++ NE P + W+ GY + C+ + ++ Y +R
Sbjct: 90 ISIELAVNLSQIIAAICVLSVSRNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLP 149
Query: 131 -----NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF-- 183
N V D+ F ++ E V +R + A
Sbjct: 150 TVQGSNQNYVPDNSFESNSFTGISPPHVSEAGVVTVTNGVSRNNTVTTNPRAQAFADHFK 209
Query: 184 --------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 235
+W++VG WV GG AP LY L + FL F +L LI
Sbjct: 210 MALDCFFAVWFVVGNVWVF-GGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALI--- 265
Query: 236 LCCCLPCIIAIL 247
CCCLPCII+++
Sbjct: 266 -CCCLPCIISLM 276
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ +I + +L ++ +E P + WI GYA C+ + L++ Y N
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 VRDDEMGGEDFRDVN--------NDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF--- 183
+D G+ ++N + S E DG +T+T +S R + A
Sbjct: 173 EQDS---GQHRPNLNVAAGPFAFSISRTSEADG--RQTNTTSSRGSRYPGFISAARLKVI 227
Query: 184 -------------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLAC 230
+W++VG W+ GG AP LY L +VFL F +L
Sbjct: 228 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCT 286
Query: 231 LIGIALCCCLPCIIAIL 247
I CCCLPCII+IL
Sbjct: 287 TI----CCCLPCIISIL 299
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ E P + W+ GY + C + ++ Y RN
Sbjct: 91 ISIEVIVNFSQIVAAIVVLCVSRKEHPQAPLLEWVIGYTVGCFATLPHLYWRYIHRNIVN 150
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYR--TSTRTSFTKRCESINTMASF--------- 183
+ NN +E R + R + IN +
Sbjct: 151 GEHESSHTPQGSAHNNSNEATHAASASERRRNAARNAVLAN-PRINALFDHFKMALDCFF 209
Query: 184 -LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W++VG W+ GG AP LY L +VFL F +L +I CCCLPC
Sbjct: 210 AVWFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPC 264
Query: 243 IIAIL 247
II+I+
Sbjct: 265 IISIM 269
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 25/190 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +++ A V+ + +L+ + +E P + WI GY + C+ + L++ Y RN
Sbjct: 91 ISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTVGCIASLPLIYWRYVHRNRHL 150
Query: 135 VRDDEM----GGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFL------ 184
++ + +++ + GIV R C ++ +A
Sbjct: 151 DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLRLGC---IAISCPRLSVLAYHFKTAVDC 207
Query: 185 ----WWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALC 237
W++VG W+ G + Q AP +Y L + FLA V +AI ++ A A+C
Sbjct: 208 FFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AIC 262
Query: 238 CCLPCIIAIL 247
CC PC+I++L
Sbjct: 263 CCFPCLISVL 272
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
++ + +L+ + +E P + WI GY + C+ + L+ RN ++ E +
Sbjct: 278 IVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQPPAAY 337
Query: 146 RDVNNDSEDEEED----------GIVYRTSTRTSFTKRCESINTMASF-LWWIVGFYWVV 194
++ + E + G + + R S F +W++VG W+
Sbjct: 338 PNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNVWIF 397
Query: 195 SGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
G L Q AP +Y L + FLA V +AI V+ A A+CCC PC+I++L
Sbjct: 398 GGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCA-----AICCCFPCLISLLRLQE 452
Query: 252 GQVHQR 257
H R
Sbjct: 453 DLGHTR 458
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
++ + +L+ + +E P + WI GY + C+ + L+ RN ++ E +
Sbjct: 102 IVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQPPAAY 161
Query: 146 RDVNNDSEDEEED----------GIVYRTSTRTSFTKRCESINTMASF-LWWIVGFYWVV 194
++ + E + G + + R S F +W++VG W+
Sbjct: 162 PNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNVWIF 221
Query: 195 SGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 251
G L Q AP +Y L + FLA V +AI V+ A A+CCC PC+I++L
Sbjct: 222 GGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCA-----AICCCFPCLISLLRLQE 276
Query: 252 GQVHQR 257
H R
Sbjct: 277 DLGHTR 282
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNT-- 132
++++++ + +I S +L ++ +E P + WI GYA C+ + L++ YR RN
Sbjct: 110 ISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVT 169
Query: 133 -------RRVRDDEMGGEDFR-DVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASF- 183
R+ + G+ + +SE + + + + T+ +
Sbjct: 170 EQEAAQPRQSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYF 229
Query: 184 ---------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 234
+W++VG W+ GG AP +Y L +VFL F +L I
Sbjct: 230 KMALDCFFAVWFVVGNVWIF-GGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATI-- 286
Query: 235 ALCCCLPCIIAIL 247
CCCLPCII++L
Sbjct: 287 --CCCLPCIISLL 297
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+I+SA L I+ E+P +RLWI GY L C++ ++L++ +R +
Sbjct: 70 LIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ----------- 118
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
RD N+ S+ E E +S + RC + + +W+++G W Q AP
Sbjct: 119 RDGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAP 178
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 246
+L+ L L ++ C ++ + LCCC+P I ++
Sbjct: 179 KLHLLCSFLLVWNA----ICYSFPFILFLLLCCCVPLISSL 215
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 59 RELEERRADWGYSK----PV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWI 109
R RR D G + P+ ++++++ A ++ + ++++ +E P + W+
Sbjct: 81 RPTSSRRGDNGNGRRTRSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWV 140
Query: 110 CGYALQCLVHVVLVWMEYRRRN-------TRRVRDDEMGGED--FRDVNNDSEDEEEDGI 160
GY CL + +++ +R N ++R + E + V+ +EE+
Sbjct: 141 IGYTCGCLATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENST 200
Query: 161 VYRTSTRTSFTKRCESINTMASFL--------------WWIVGFYWVVSGGDLLLQAAPR 206
+ R + + ES+ T + L W++VG W+ GG +P+
Sbjct: 201 GVSAAPRNN--QVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIF-GGHSSPSDSPK 257
Query: 207 LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
LY L + FL F +L I CCCLPC+I++L
Sbjct: 258 LYRLCIAFLTFSCIGYAMPFILCATI----CCCLPCLISVL 294
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+I+SA L I+ E+P +RLWI GY L C++ ++L++ +R +
Sbjct: 54 LIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ----------- 102
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
RD N+ S+ E E +S + RC + + +W+++G W Q AP
Sbjct: 103 RDGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAP 162
Query: 206 RLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 246
+L+ L L ++ C ++ + LCCC+P I ++
Sbjct: 163 KLHLLCSFLLVWNA----ICYSFPFILFLLLCCCVPLISSL 199
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 25/216 (11%)
Query: 52 LVRETAARELEERRADWGYSKPV-----VALDIMWNSAFVIVSAAMLIITINERPSTRIR 106
L T+ R + R+ + P+ + ++++ + ++ S +L ++ +E P +
Sbjct: 38 LNSRTSRRRGDTTRSSRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPRAPLF 97
Query: 107 LWICGYALQCLVHVVLVWMEYRRRNTRR---------VRDDEMGGEDFRD-VNNDSED-- 154
WI G+A C+ + L++ Y R +R ++ G D N ED
Sbjct: 98 AWIVGFASGCVATLPLLYWRYYHNCLVRELESSSQASLRSNDPSGTLLSDSTTNGGEDVP 157
Query: 155 --EEEDGIVYRTSTRTSFTKRCESINTMASF-LWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
+ + + R I F +W+IVG W+ GG AP LY L
Sbjct: 158 ASSRSNQESWLMNARLKLLVEYFKIAVDCFFAIWFIVGNVWIF-GGHSSADQAPNLYRLC 216
Query: 212 VVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
VVFL F +L I CCCLPCII+IL
Sbjct: 217 VVFLTFSCIGYAMPFILCATI----CCCLPCIISIL 248
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 40/267 (14%)
Query: 2 SSSSDAAARSDSHAPLLRPRDPSVSPNAARPATLALLLGRATGRGHGPSMLVRETAAREL 61
+S+S SD+ P R PS S P + A S ++R L
Sbjct: 23 TSTSHQDLHSDTDEPHQEDR-PSTSTRTPSPQSSA-------------STSPTAYSSRNL 68
Query: 62 EERRADWGYSKPV--------VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYA 113
R D Y + ++ + + A + + +LI++ +E P + WI GY
Sbjct: 69 SFPRRDSFYGRGTSLWNSGLWISFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYT 128
Query: 114 LQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKR 173
+ C + LV+ Y RN + E + + + S + T
Sbjct: 129 VGCTASLPLVYWRYVHRNRPSEEEPEQPPTTYPTLTSSSSEGRNQRTSGSVLHLGCITIA 188
Query: 174 CESINTMASF----------LWWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VF 220
C + +A +W++VG W+ G Q AP +Y L + FLA V
Sbjct: 189 CPRPSILAYHSKTAVDCFFAIWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVG 248
Query: 221 FAIFCVVLACLIGIALCCCLPCIIAIL 247
+AI ++ A A+CCC PC+I++L
Sbjct: 249 YAIPFIMCA-----AICCCFPCLISVL 270
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L ++ ERP +R+WI GY C++ ++L++ Y+R + + G D+
Sbjct: 108 LSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYS-----AQGDGFSLPDIEQQR 162
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+EE S + +C + + +W+++G WV AP+L+ L +
Sbjct: 163 NNEE--------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 214
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
LA++ F +L L LCCC+P + +L
Sbjct: 215 TLLAWNAISYSFPFLLFVL----LCCCVPLVSNLL 245
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L ++ ERP +R+WI GY C++ ++L++ Y+R + + G D+
Sbjct: 108 LSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYS-----AQGDGFSLPDIEQQR 162
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+EE S + +C + + +W+++G WV AP+L+ L +
Sbjct: 163 NNEE--------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 214
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
LA++ F +L L LCCC+P + +L
Sbjct: 215 TLLAWNAISYSFPFLLFVL----LCCCVPLVSNLL 245
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L ++ ERP +R+WI GY C++ ++L++ Y+R + + G D+
Sbjct: 77 LSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYS-----AQGDGFSLPDIEQQR 131
Query: 153 EDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAV 212
+EE S + +C + + +W+++G WV AP+L+ L +
Sbjct: 132 NNEE--------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 183
Query: 213 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
LA++ F +L L LCCC+P + +L
Sbjct: 184 TLLAWNAISYSFPFLLFVL----LCCCVPLVSNLL 214
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ N + ++ + +L ++ NE P + W+ GY + C+ + ++ Y RN R
Sbjct: 88 ISIELIVNLSQIVAAVVVLSVSRNEHPQAPLFTWLLGYTIGCIAILPHLYWRYLHRN-RL 146
Query: 135 VRDDEM-----GGEDFRDVN------NDSEDEEEDGIVYRTSTRTSFTKRCESINTM-AS 182
+ EM G + ++N + E +G +RT+ M A
Sbjct: 147 DMEQEMPPQRSPGMNISEINSYAVVSSPHASEAVEGANSTGVSRTNLPMASPRFYAMVAC 206
Query: 183 F---------LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIG 233
F +W++VG W+ G AP LY + +VFLAF +L +I
Sbjct: 207 FKLVLDCFFAVWFVVGNVWMF-GSRSSAHDAPNLYRICLVFLAFGFIGYALPFILCTMI- 264
Query: 234 IALCCCLPCIIAIL 247
CCCLPCII++L
Sbjct: 265 ---CCCLPCIISVL 275
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ V + L ++ NERP +RLWI GY + CL++++L++ YR+++T F
Sbjct: 99 ITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDT-----SHENAFSF 153
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
D+ EE T+ + +C + + +W+++G WV AP
Sbjct: 154 GDIEQQQRSREE------TTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAP 207
Query: 206 RLYWLAVVFLAFD 218
L+ L + LA++
Sbjct: 208 ILHVLCISLLAWN 220
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ V + L ++ NERP +RLWI GY + CL++++L++ YR+++T F
Sbjct: 228 ITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDT-----SHENAFSF 282
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
D+ EE T+ + +C + + +W+++G WV AP
Sbjct: 283 GDIEQQQRSREE------TTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAP 336
Query: 206 RLYWLAVVFLAFD 218
L+ L + LA++
Sbjct: 337 ILHVLCISLLAWN 349
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 23 PSVSPNAARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWN 82
P SP+++ LA+ + RAT + + A+R +D G + P ++ M +
Sbjct: 38 PESSPSSSFLMRLAMRVSRATWFIFLRRVFHYQNASR------SDLG-TNPFNSITWMIS 90
Query: 83 SAF-----VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRD 137
+ V + L ++ ERP +RLWI GY + CL++++L++ YR+++T
Sbjct: 91 ELIALLVQITVITSTLALSKKERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQHT----- 145
Query: 138 DEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGG 197
+ F D+ EE T+ + RC + + +W+++G WV
Sbjct: 146 SQGNAFSFGDIELQQRSREE------TTRCSHLMNRCRTSLELFFAIWFVIGNVWVFDSR 199
Query: 198 DLLLQAAPRLYWLAVVFLAFD 218
AP L+ L + LA++
Sbjct: 200 FGSFHYAPILHVLCISLLAWN 220
>gi|147742777|gb|ABQ50557.1| hypothetical protein [Brassica rapa]
Length = 140
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 228 LACLIGIALCCCLPCIIAILYAVAGQ 253
LAC+IGIA+CCCLPCIIA+LYAVA Q
Sbjct: 59 LACVIGIAVCCCLPCIIAVLYAVADQ 84
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L I+ ERP +RLWI GY + CL++++L++ YR+ + ++ G DV
Sbjct: 110 LAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDI-----NQGNGFVLGDVEQQQ 164
Query: 153 EDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
EE TR+S +C + + +W+++G WV AP+L+ L
Sbjct: 165 RGREE--------TRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLC 216
Query: 212 VVFLAFD 218
V LA++
Sbjct: 217 VSLLAWN 223
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L I+ ERP +RLWI GY + CL++++L++ YR+ + ++ G DV
Sbjct: 110 LAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDI-----NQGNGFVLGDVEQQQ 164
Query: 153 EDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
EE TR+S +C + + +W+++G WV AP+L+ L
Sbjct: 165 RGREE--------TRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLC 216
Query: 212 VVFLAFD 218
V LA++
Sbjct: 217 VSLLAWN 223
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 34/200 (17%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++++++ A ++ + ++++ +E P + W+ GY C+ + +++ +R +
Sbjct: 96 ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWRFRTYSRGT 155
Query: 135 VRDDEMGGEDFRDVNNDSED-------------EEEDGIVYRTSTRTSFTKRCESINTMA 181
+D NN+ + +EE+ + R + + E++ T
Sbjct: 156 GQDSSQRLSSSSQANNNPSESTPYTAVSVAQAADEENSTDMSAAPRNN--QVGETLRTRL 213
Query: 182 SFL--------------WWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVV 227
+ L W++VG W+ GG +P+LY L + FL F +
Sbjct: 214 NGLVDHFKMAIDCFFAVWFVVGNVWIF-GGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFI 272
Query: 228 LACLIGIALCCCLPCIIAIL 247
L I CCCLPC+I++L
Sbjct: 273 LCATI----CCCLPCLISVL 288
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194
D+ + + + +G +RTS + +
Sbjct: 150 ---DQEPQQPPTTYPTLTPSQSSEGRNHRTS----------------GIVLHLGCISISC 190
Query: 195 SGGDLLLQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAIL 247
Q AP +Y L + FLA V +AI ++ A A+CCC PC+I++L
Sbjct: 191 PSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCA-----AICCCFPCLISVL 239
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 228 LACLIGIALCCCLPCIIAILYAVAGQ 253
+AC IGIALCCCLPC+IAILYA+AGQ
Sbjct: 1 MACFIGIALCCCLPCVIAILYALAGQ 26
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 93 LIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDVNNDS 152
L I+ ERP +RLWI GY + CL++++L++ YR+ D G F V D
Sbjct: 110 LAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQL-------DVYQGNGF--VLGDV 160
Query: 153 EDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLA 211
E ++ R TR+S +C + + +W+++G WV AP+L+ L
Sbjct: 161 EQQQRG----REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLC 216
Query: 212 VVFLAFD 218
V L+++
Sbjct: 217 VSLLSWN 223
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 89 SAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV 148
S L+I+ E+P +R+WI GY + C+++++ V+ YR+ ++ D + D
Sbjct: 97 STFTLVISKREKPVWPMRIWISGYDIGCVLNLLTVYGRYRQ--IYLIQGDALSLSDIEQQ 154
Query: 149 NNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLY 208
N E VYR S +C + +W+++G WV Q AP+L+
Sbjct: 155 RNSGETS-----VYRMS---HLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLH 206
Query: 209 WLAVVFLAFD 218
L + L ++
Sbjct: 207 VLCITLLTWN 216
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ ++ L+I+ E+P +R+WI GY + CL+ ++LV+ YR+ + V+ D G D
Sbjct: 81 ISMTTFTLVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYGRYRQVHV--VQGDSFGLSDL 138
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
+ SED S T +C + + +W+++G WV AP
Sbjct: 139 -EQQRGSED----------SRCTHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFNRAP 187
Query: 206 RLYWLAVVFLAFD 218
+L+ L + LA++
Sbjct: 188 KLHVLCISLLAWN 200
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 49/213 (23%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+++++ + +I S +L ++ +E P + W+ GY C+ + +++ + RN
Sbjct: 107 ISIELAFTLTQIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRN--- 163
Query: 135 VRDDEMGGEDFRDVN------NDSED-------------EEEDGIVYRTSTRTSFTKRCE 175
G E VN N + D E ED +S+ T
Sbjct: 164 -----RGSEAVVQVNQASPHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANTR 218
Query: 176 SINTMASF---------LWWIVGFYWVVSGGDLLLQAAPRLY--WLAVVFLAFDVFFAIF 224
M F + ++VG W+ GG + AP LY +L + F
Sbjct: 219 MGLIMDHFKTALDCFFGVLFVVGNVWIF-GGHASVSDAPNLYRYFLNPDVKTLQISFESL 277
Query: 225 CVV---LACL-------IGIALCCCLPCIIAIL 247
C+V L+C+ + +CCCLPCII++L
Sbjct: 278 CIVYLTLSCINYAMPFILCAMICCCLPCIISVL 310
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 88 VSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRD 147
++ +L I+ E+P +RLWI GY L C++ ++L++ Y M GE R
Sbjct: 104 ITVFVLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYL-------MHGE--RV 154
Query: 148 VNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL 207
+D+E + S +C + + +W+++G W+V Q AP+L
Sbjct: 155 GLSDTEQRRTS----QASRSLHLMNKCRTSLELFFAIWFVMGNVWIVDSRFSSFQRAPKL 210
Query: 208 YWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 247
+ L V L ++ C ++ + LCCC+P + ++L
Sbjct: 211 HLLCVFLLVWNA----ICYSFPFILFLLLCCCVPLVSSLL 246
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 71 SKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR 130
S P + L+ + + ++ L I+ E+P +R+WI GY + C++ ++L++ YR+
Sbjct: 81 SSPWMMLEFVALVIQISITMFTLAISKAEKPVWPVRIWIIGYNIGCVLSLLLLYGRYRQI 140
Query: 131 NTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGF 190
NT + D G D + + E+ V R S +C + + +W+++G
Sbjct: 141 NT--TQADGFGLPDL-----EQQRGSEESSVCRCSI---LMHKCRTSLELFFAIWFVMGN 190
Query: 191 YWVVSGGDLLLQAAPRLYWLAVVFLAFDVF 220
WV AP+L+ L + LA++
Sbjct: 191 VWVFDSRFGSYHRAPKLHVLCISLLAWNAL 220
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
+W++VG W+ GG AP LY L +VFL F +L I CCCLPCI
Sbjct: 355 VWFVVGNVWIF-GGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATI----CCCLPCI 409
Query: 244 IAIL 247
I+IL
Sbjct: 410 ISIL 413
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 184 LWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 243
+W++VG W+ GG AP LY L +VFL F +L +I CCCLPCI
Sbjct: 9 VWFVVGNVWIF-GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMI----CCCLPCI 63
Query: 244 IAIL 247
I+++
Sbjct: 64 ISVM 67
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 89 SAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDFRDV 148
S L+I+ E+P +R+WI GY + C+++++ V+ YR+ ++ D + D
Sbjct: 97 STFTLVISKREKPVWPMRIWISGYDIGCVLNLLTVYGRYRQ--IYLIQGDALSLSDIEQQ 154
Query: 149 NNDSEDEEEDGIVYRTSTRTS-FTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRL 207
N E TR S +C + +W+++G WV Q AP+L
Sbjct: 155 RNSGE------------TRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKL 202
Query: 208 YWLAVVFLAFD 218
+ L + L ++
Sbjct: 203 HVLCITLLTWN 213
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 86 VIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDF 145
+ ++ L I+ E P +R+WI GY + C++ ++L++ YR+ N + G+ F
Sbjct: 48 ICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGRYRQLNATQ-------GDGF 100
Query: 146 RDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAP 205
+ + + E+ V R S +C + + +W+++G WV AP
Sbjct: 101 GLPDLEQQGGSEESSVCRYS---HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSYFRAP 157
Query: 206 RLYWLAVVFLAFD 218
+L+ L + LA++
Sbjct: 158 KLHVLCISLLAWN 170
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 184 LWWIVGFYWVVSGGDLL--LQAAPRLYWLAVVFLAFD-VFFAIFCVVLACLIGIALCCCL 240
+W++VG W+ G Q AP +Y L + FLA V +A+ ++ A A+CCC
Sbjct: 113 VWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVGYAVPFIMCA-----AICCCF 167
Query: 241 PCIIAIL 247
PC+I++L
Sbjct: 168 PCLISVL 174
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+AL++ A ++V+ A++ + ERP+ +R+W+ Y + ++ + L++ +R ++
Sbjct: 60 LALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSS-- 117
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194
GG S+D E G R+ + + + +W+++G WV
Sbjct: 118 ---GARGG-------TLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVF 167
Query: 195 SGGDLLLQAAPRLYWLAVVFLAFD 218
APRLY L + LA++
Sbjct: 168 DARLGSFHRAPRLYALCIGLLAWN 191
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
+AL++ A ++V+ A++ + ERP+ +R+W+ Y + ++ + L++ +R ++
Sbjct: 60 LALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSS-- 117
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVV 194
GG S+D E G R+ + + + +W+++G WV
Sbjct: 118 ---GARGG-------TLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVF 167
Query: 195 SGGDLLLQAAPRLYWLAVVFLAFD 218
APRLY L + LA++
Sbjct: 168 DARLGSFHRAPRLYALCIGLLAWN 191
>gi|297790029|ref|XP_002862928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308705|gb|EFH39187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 213
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 49 PSMLVRETAARELEERRADWGYSKP 73
PSMLVRE AA +LEER++DW Y KP
Sbjct: 101 PSMLVREAAAEQLEERQSDWAYFKP 125
>gi|297820672|ref|XP_002878219.1| hypothetical protein ARALYDRAFT_907322 [Arabidopsis lyrata subsp.
lyrata]
gi|297324057|gb|EFH54478.1| hypothetical protein ARALYDRAFT_907322 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 49 PSMLVRETAARELEERRADWGYSKP 73
PSMLVRE AA +LEER++DW Y KP
Sbjct: 57 PSMLVREAAAEQLEERQSDWAYFKP 81
>gi|297837999|ref|XP_002886881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332722|gb|EFH63140.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 49 PSMLVRETAARELEERRADWGYSKP 73
PSM+VRE AA +LEER++DW Y KP
Sbjct: 4 PSMIVREVAAEQLEERQSDWAYFKP 28
>gi|297838001|ref|XP_002886882.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332723|gb|EFH63141.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 112
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 49 PSMLVRETAARELEERRADWGYSKP 73
PSM+VRE AA +LEER++DW Y KP
Sbjct: 4 PSMIVREAAAEQLEERQSDWAYFKP 28
>gi|414885025|tpg|DAA61039.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRR 134
++ +I+ A V+ + +LI + +E P + WI GY L C+ + L++ Y RN
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 135 VRDDEMGGEDFRDVNNDSEDEEEDGIVYRTS----TRTSFTKRCESINTMASFL------ 184
D+ + + + +G +RTS + C ++ +A
Sbjct: 150 ---DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDC 206
Query: 185 ----WWIVGFYWVVSGGDLL--LQAAPRLY 208
W++VG W+ G + Q AP +Y
Sbjct: 207 FFAVWFVVGNVWIFGGRSISSDAQDAPNMY 236
>gi|297799898|ref|XP_002867833.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313669|gb|EFH44092.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 99
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 49 PSMLVRETAARELEERRADWGYSKP 73
PSMLVRE AA +LEER++DW Y +P
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYLQP 28
>gi|422293880|gb|EKU21180.1| hypothetical protein NGA_0133600 [Nannochloropsis gaditana CCMP526]
Length = 409
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 161 VYRTSTRTSFTKR-----CESINTMASF--LWWIVGFYWVVSGGDLLLQAAPR---LYWL 210
+YR + R T R + N + +F +W++VG W+ GGD+ + P +Y L
Sbjct: 87 LYRLNGRMPATTRLMRFLSHARNGLDAFGLIWFVVGNMWLF-GGDVEICPHPNRSPVYSL 145
Query: 211 AVVFLAFD-VFFAIFCVVLACLIGIALCCCLPCIIAIL 247
V F+ + + CVV+ ++ + LC CLPC+I IL
Sbjct: 146 CVAFVFINYAQLCLPCVVVIIMLPV-LCFCLPCLIRIL 182
>gi|297837997|ref|XP_002886880.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332721|gb|EFH63139.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 49 PSMLVRETAARELEERRADWGYSKP 73
PSM+VRE A +LEER++DW Y KP
Sbjct: 4 PSMIVREAATEQLEERQSDWAYFKP 28
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHV-VLVWMEYRRRNTR 133
+AL++ A ++++ ++ + ERP+ +RLW+ Y + ++ + +L W R
Sbjct: 481 LALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAAR 540
Query: 134 RVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWV 193
R D EM G D DS + + + + +W+++G WV
Sbjct: 541 RGDDPEMHGAG--DALRDS---------------SYLMNKARAFLELFFAMWFVMGNVWV 583
Query: 194 VSGGDLLLQAAPRLYWLAVVFLAFD 218
APRLY L + LA++
Sbjct: 584 FDARLGSFHRAPRLYALCIGLLAWN 608
>gi|357509167|ref|XP_003624872.1| D-mannose binding lectin family protein expressed [Medicago
truncatula]
gi|355499887|gb|AES81090.1| D-mannose binding lectin family protein expressed [Medicago
truncatula]
Length = 617
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 169 SFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYW 209
S K+ E NT+ S++WW+ F W+V +PRLYW
Sbjct: 577 SIVKKLEPTNTLTSYVWWVFEFNWIVVEWPSASGRSPRLYW 617
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 24/139 (17%)
Query: 87 IVSAAMLIITI------NERPSTRIRLWICGYALQCLVHV-VLVWMEYRRRNTRRVRDDE 139
++ A MLI T ERP+ +RLW+ Y + ++ + +L W RR D E
Sbjct: 72 VIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAARRGDDPE 131
Query: 140 MGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDL 199
M G D DS + + + + +W+++G WV
Sbjct: 132 MHGAG--DALRDS---------------SYLMNKARAFLELFFAMWFVMGNVWVFDARLG 174
Query: 200 LLQAAPRLYWLAVVFLAFD 218
APRLY L + LA++
Sbjct: 175 SFHRAPRLYALCIGLLAWN 193
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 183 FLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
+W+IVG W +S + + AP LY L + + +++A+ + LAC I CCLP
Sbjct: 217 LVWFIVGSIW-LSECETCNKTAPHLYRLVLALIV--IYYALLGLPLACFCLIM--CCLPL 271
Query: 243 IIAILYAVAGQVHQRQ 258
I +L A +R+
Sbjct: 272 FIRLLLPYAESTQRRR 287
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW-----MEYRR 129
+AL++ A V+++ A++ + ERP+ +RLW+ Y + ++ + L++
Sbjct: 186 LALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSSS 245
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
D EM G ND+ R+ + + + +W+++G
Sbjct: 246 SAGGGRGDLEMHGA------NDA-----------PGNRSYLMNKARAFLELFFAMWFVMG 288
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFD 218
WV Q APRLY L V LA++
Sbjct: 289 NVWVFDARLGSFQRAPRLYALCVSLLAWN 317
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 75 VALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVW-----MEYRR 129
+AL++ A V+++ A++ + ERP+ +RLW+ Y + ++ + L++
Sbjct: 186 LALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSSS 245
Query: 130 RNTRRVRDDEMGGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVG 189
D EM G ND+ R+ + + + +W+++G
Sbjct: 246 SAGGGRGDLEMHGA------NDAP-----------GNRSYLMNKARAFLELFFAMWFVMG 288
Query: 190 FYWVVSGGDLLLQAAPRLYWLAVVFLAFD 218
WV Q APRLY L V LA++
Sbjct: 289 NVWVFDARLGSFQRAPRLYALCVSLLAWN 317
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 22/138 (15%)
Query: 87 IVSAAMLIITI------NERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEM 140
++ A MLI T+ ERP+ +RLW+ Y + ++ + L++ +R +
Sbjct: 88 VIVAQMLITTVVVVSSPKERPAWPLRLWVAAYNVGNVLSLPLLFWRHRHSS--------- 138
Query: 141 GGEDFRDVNNDSEDEEEDGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLL 200
+D E G + + + + +W+++G WV
Sbjct: 139 -------AAGRGDDPEMHGASDALRNSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGS 191
Query: 201 LQAAPRLYWLAVVFLAFD 218
APRLY L + L+++
Sbjct: 192 FHRAPRLYALCIGLLSWN 209
>gi|357509175|ref|XP_003624876.1| RING finger protein [Medicago truncatula]
gi|355499891|gb|AES81094.1| RING finger protein [Medicago truncatula]
Length = 296
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQAAPRLYWLAVVFLAFDVFF-AIFCVVLAC 230
K+ E +NT+ + + GF +V GG L++ L+ L +V L+ + FF A+F +
Sbjct: 104 KKTEPMNTLVLSAFLVFGFSCIVVGGQALVEVPFLLFGLTMVCLSLNEFFDAVFSFWIYL 163
Query: 231 LIGIALCCCLPCIIAILYAVAGQVHQRQ 258
++ AL C + IIA+ YA+ + R+
Sbjct: 164 IVFGALFCIVQ-IIALAYALTQPLRIRE 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,112,968,117
Number of Sequences: 23463169
Number of extensions: 166070258
Number of successful extensions: 709931
Number of sequences better than 100.0: 238
Number of HSP's better than 100.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 709381
Number of HSP's gapped (non-prelim): 269
length of query: 259
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 120
effective length of database: 9,097,814,876
effective search space: 1091737785120
effective search space used: 1091737785120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 75 (33.5 bits)