BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025005
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana
GN=CBSCBSPB5 PE=2 SV=1
Length = 548
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/252 (80%), Positives = 231/252 (91%), Gaps = 1/252 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTD+DIAT+VIA++LNLEETPVSKVMT+NP FVLSDT+A
Sbjct: 87 MAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFVLSDTIA 146
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER+ EKGKAIAAAVEGVEK+
Sbjct: 147 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAVEGVEKN 206
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSI+GPNTF+ETLRER+F+PSLSTIIPE +KV+ + +TVL T KM+E + S+A+V
Sbjct: 207 WGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQSSAAMV 266
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D IV+ALHIMH+GKF
Sbjct: 267 MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKF 326
Query: 241 LHLPVVDR-GDM 251
LHLPV+D+ GD+
Sbjct: 327 LHLPVLDKDGDV 338
>sp|Q0WLC7|Y5053_ARATH CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana
GN=CBSCBSPB4 PE=2 SV=2
Length = 548
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/252 (80%), Positives = 231/252 (91%), Gaps = 1/252 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDALLLTDSNALLCGILTD+DIAT+VIA++LNLEETPVSKVMT+NP FVLSDT+A
Sbjct: 87 MAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFVLSDTIA 146
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER+ EKGKAIAAAVEGVEK+
Sbjct: 147 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAVEGVEKN 206
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGTSI+GPNTF+ETLRER+F+PSLSTIIPE +KV+ + +TVL T KM+E + S+A+V
Sbjct: 207 WGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQSSAAMV 266
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
VENK GILTSKDILMRVISQNLP ++T VEKVMTPNPE AT+D IV+ALHIMH+GKF
Sbjct: 267 MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKF 326
Query: 241 LHLPVVDR-GDM 251
LHLPV+D+ GD+
Sbjct: 327 LHLPVLDKDGDV 338
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/251 (80%), Positives = 225/251 (89%), Gaps = 1/251 (0%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA+RRVDALLLTDSN +LCGILTDKDIATRVI++ELN+EETPVSKVMT+NP FVLS+TLA
Sbjct: 79 MASRRVDALLLTDSNEMLCGILTDKDIATRVISQELNVEETPVSKVMTKNPMFVLSETLA 138
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK
Sbjct: 139 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKS 198
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WGT+ S PNTFIETLR+RMFRPSLSTIIP+ +KV+ +SPTDTVL KKM+E + S AVV
Sbjct: 199 WGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVLKVSPTDTVLTVAKKMVEFQSSCAVV 258
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+E+K RGI TSKDILMRV+++NLP TLVE VMT NPE +DTPIV+ALHIMH+GKF
Sbjct: 259 IIEDKLRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKF 318
Query: 241 LHLPVVDR-GD 250
LHLPV D+ GD
Sbjct: 319 LHLPVTDKEGD 329
>sp|Q9LF97|Y3295_ARATH CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana
GN=CBSCBSPB3 PE=1 SV=1
Length = 556
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/255 (69%), Positives = 214/255 (83%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA LLTDS+ALL GI+TDKD+ATRVIA L ++T VSKVMTRNP FV SD+LA
Sbjct: 88 MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 147
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+AAAVEGVEK
Sbjct: 148 LEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAAAVEGVEKQ 207
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG+ S P FIETLRERMF+P+LSTII + SKV ++P+D V +A K+M +LR++S ++
Sbjct: 208 WGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPSDPVSVAAKRMRDLRVNSVII 267
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
+ NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+++T I+DALH MHDGKF
Sbjct: 268 STGNKISGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASLETTILDALHTMHDGKF 327
Query: 241 LHLPVVDRGDMPITC 255
LHLP++D+ C
Sbjct: 328 LHLPIIDKDGSAAAC 342
>sp|Q9SJQ5|Y2650_ARATH CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana
GN=CBSCBSPB2 PE=2 SV=1
Length = 536
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/255 (70%), Positives = 212/255 (83%), Gaps = 5/255 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAARRVDA+LLTDS+ALL GI+TDKDIATRVIA L E T VSKVMTRNP FV SD+LA
Sbjct: 86 MAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLA 145
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120
+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+AAE+G A+A AVE E+H
Sbjct: 146 IEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERH 203
Query: 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVV 180
WG SG FI+TLRERMF+P+LSTI+ E +KV +S +D V +A+KKM +LR++S ++
Sbjct: 204 WG---SGNFAFIDTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVII 260
Query: 181 TVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKF 240
V NK GILTSKDILMRV++QNL + TLVEKVMTPNPECA+I+T I+DALHIMHDGKF
Sbjct: 261 AVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETTILDALHIMHDGKF 320
Query: 241 LHLPVVDRGDMPITC 255
LHLPV D+ + C
Sbjct: 321 LHLPVFDKDGFAVAC 335
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 147/275 (53%), Gaps = 25/275 (9%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MAA+R + +L+ D + L GI+T DIATR + LN +T ++ +M+ +P + SDT
Sbjct: 89 MAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSPLCITSDTRF 148
Query: 61 VEALQKMVQGKFRHLPVV----------ENGEVIALLDIAKCLYDAIARMERAAEKGKAI 110
+AL M++ KFRHLPVV + G+VI ++++ CL + + R+ R E + +
Sbjct: 149 DDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACLREPLNRIARQQEAAQKL 208
Query: 111 AAAVEGVEKHW----------GTSISGPNT-----FIETLRERMFRPSLSTIIPEKSKVV 155
A+EG ++ +S+SG + ++E+L+++ + ++I +
Sbjct: 209 VEALEGAQEEIENKSVSGNTNSSSVSGNHAAEFLEYVESLKKKASGLEIMSLIDSSEEPF 268
Query: 156 TISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215
+ TV AT+ M +S+ +V G+ T+ D+++RV++ L + V +VM
Sbjct: 269 LVGTRTTVAEATESMARSGVSAVLVMDNGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVM 328
Query: 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRGD 250
TP+P+CA + AL M +GKF +LPVVD D
Sbjct: 329 TPHPDCALASLRVSTALERMIEGKFSNLPVVDESD 363
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
MA V A+L+ D N + G+ T D+ RV+A L+ + V +VMT +P L+
Sbjct: 283 MARSGVSAVLVMD-NGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTPHPDCALASLRV 341
Query: 61 VEALQKMVQGKFRHLPVVENGEVI 84
AL++M++GKF +LPVV+ + I
Sbjct: 342 STALERMIEGKFSNLPVVDESDAI 365
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + +L++ DS + GI+T++DI R++ ++PV K MT++ V DT
Sbjct: 29 MKEHNLGSLVVIDSQNRVVGIITERDIVKAASNRDI---DSPVEKYMTKDVKGVTEDTEV 85
Query: 61 VEALQKMVQGKFRHLPVVE-NGE---VIALLDIAKCLYDA-IARMERAAE--KGKAIAAA 113
+AL M+ FRHLP+++ NG+ ++++ D+A+ L D + + AE KG +
Sbjct: 86 TDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKGTGVICP 145
Query: 114 VEGVE 118
V G+E
Sbjct: 146 VCGME 150
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTL 210
+KV + P T+ A K+M E L S V+ +N+ GI+T +DI+ + N DS
Sbjct: 11 TKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVKA--ASNRDIDSP- 67
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
VEK MT + + T DT + DAL IM + F HLP++
Sbjct: 68 VEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPII 103
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-NKPRGILTSKDILMRVISQNLPADST 209
+ V+T SPT+T + KM E + S V+ E ++P GI+T +D++++V+SQ D
Sbjct: 11 RRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEV 70
Query: 210 LVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+ +M+ D + +A+ +M D LP+VD
Sbjct: 71 IARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVD 108
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0653 PE=4 SV=1
Length = 194
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 170 MLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIV 229
M E + + V+ NKP GI+T +DI+ RV+S+NL L E+VM+ + I
Sbjct: 33 MTENNIGAVVIVENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASIT 92
Query: 230 DALHIMHDGKFLHLPVVDRGDM 251
+A IM LPVV G++
Sbjct: 93 EAAKIMATHGIKRLPVVKDGEL 114
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M + A+++ ++N + GI+T++DI RV+++ L ++ +VM++ + +
Sbjct: 33 MTENNIGAVVIVENNKPI-GIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASI 91
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALL 87
EA + M + LPVV++GE++ ++
Sbjct: 92 TEAAKIMATHGIKRLPVVKDGELVGIV 118
>sp|Q5NGP7|KDSD_FRATT Arabinose 5-phosphate isomerase KdsD OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=kdsD PE=1
SV=1
Length = 327
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 4 RRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEA 63
+ V L+ ++N LL GI TD D+ A N + +S+VMT+NP + + +A+ A
Sbjct: 234 KGVGNTLVAENNTLL-GIFTDGDLRRMFEAESFN-SQRAISEVMTKNPKSISKEEMAITA 291
Query: 64 LQKMVQGKFRHLPVVENGEVI 84
L+KM + + L VV+NG I
Sbjct: 292 LEKMEKYEITSLAVVDNGHNI 312
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQN 203
+ I+ + +++ + PTD + A ++ + + + +V N GI T D L R+
Sbjct: 205 VENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAENNTLLGIFTDGD-LRRMFEAE 263
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRG 249
+ +VMT NP+ + + + AL M + L VVD G
Sbjct: 264 SFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNG 309
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR---GILTSKDILMRVISQNLPADSTLVEKVMTP 217
DTV A K M + + + VV + + GI+T +D L ++I Q + ST V +MT
Sbjct: 79 DTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 138
Query: 218 NPECATI--DTPIVDALHIMHDGKFLHLPVV-DRG 249
+ T+ +T ++ A+ +M D + H+PV+ D+G
Sbjct: 139 ENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKG 173
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 1 MAARRVDALLLT--DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTF--VLS 56
M V AL++ L GI+T++D ++I + + + T V +MT V
Sbjct: 88 MTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTP 147
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALLDIA 90
+T + A+Q M + RH+PV+++ +I ++ I
Sbjct: 148 ETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIG 181
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMTR-----NPTFVLSDTLAVEALQKMVQG 70
+L G+LTD+DIA R A+ + +TPVS+VM+ NP L D A Q M Q
Sbjct: 42 GVLKGMLTDRDIALRTTAQGRD-GQTPVSEVMSTELVSGNPNMSLED-----ASQLMAQH 95
Query: 71 KFRHLPVVENGE---VIALLDIA 90
+ R LP+V+ ++AL D+A
Sbjct: 96 QIRRLPIVDQNNLVGIVALGDLA 118
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
++V T+SP T+ A M + + + V + +G+LT +DI +R +Q T V
Sbjct: 10 TQVATVSPNQTIQEAASLMKQHNVGAIPVVEQGVLKGMLTDRDIALRTTAQGRDGQ-TPV 68
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRGDM 251
+VM+ + + DA +M + LP+VD+ ++
Sbjct: 69 SEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNL 108
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M A+ A + + L GI+TD D+ R + R + E T VMT+NP + D LA
Sbjct: 225 MTAKGFGATAVVNEEGKLVGIITDGDL-RRFVNRGGSFENTRAKDVMTKNPKTIKPDELA 283
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCL 93
++AL+KM L VV E E I +L + L
Sbjct: 284 LKALRKMEDHNITVLIVVNEENEPIGILHMHDIL 317
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 176 SSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIM 235
++AVV E K GI+T D L R +++ ++T + VMT NP+ D + AL M
Sbjct: 232 ATAVVNEEGKLVGIITDGD-LRRFVNRGGSFENTRAKDVMTKNPKTIKPDELALKALRKM 290
Query: 236 HDGKFLHLPVVDRGDMPI 253
D L VV+ + PI
Sbjct: 291 EDHNITVLIVVNEENEPI 308
>sp|Q9ZD42|Y505_RICPR Uncharacterized protein RP505 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP505 PE=3 SV=1
Length = 319
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +R+ L+TD L GI+TD D+ R I +++L+ S +MT+NP ++ S+ A
Sbjct: 225 MNKKRLGCTLVTDKEQNLIGIITDGDLR-RNIHDQIHLK--TASSIMTKNPHYISSEIFA 281
Query: 61 VEALQKMVQGKFRHLP 76
EAL M ++P
Sbjct: 282 QEALNLMKAKNITNIP 297
>sp|Q9KHT9|OPUCA_LISMN Carnitine transport ATP-binding protein OpuCA OS=Listeria
monocytogenes GN=opuCA PE=1 SV=1
Length = 397
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
M +RVD LL+ D +L G + + I +LN T V ++ +N +V DTL
Sbjct: 275 MKEKRVDTLLVVDEGNVLKGFIDVEQI-------DLNRRTATSVMDIIEKNVFYVYEDTL 327
Query: 60 AVEALQKMVQGKFRHLPVVENGE----VIALLDIAKCLYDAI-ARMERAAE 105
+ +Q++++ ++++PVV+ + ++ + +YD+I +E A E
Sbjct: 328 LRDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATE 378
>sp|G2JZ44|OPUCA_LISM4 Carnitine transport ATP-binding protein OpuCA OS=Listeria
monocytogenes serotype 1/2a (strain 10403S) GN=opuCA
PE=1 SV=1
Length = 397
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
M +RVD LL+ D +L G + + I +LN T V ++ +N +V DTL
Sbjct: 275 MKEKRVDTLLVVDEGNVLKGFIDVEQI-------DLNRRTATSVMDIIEKNVFYVYEDTL 327
Query: 60 AVEALQKMVQGKFRHLPVVENGE----VIALLDIAKCLYDAI-ARMERAAE 105
+ +Q++++ ++++PVV+ + ++ + +YD+I +E A E
Sbjct: 328 LRDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATE 378
>sp|P42502|KPSF1_ECOLX Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli GN=kpsF
PE=3 SV=1
Length = 317
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 9 LLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMV 68
+++ D+ L GI+TD D+ R + +E +L +++MTR P + DT+ +EA +KM
Sbjct: 245 VMVEDAEGGLAGIITDGDL-RRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQ 303
Query: 69 QGK 71
+ K
Sbjct: 304 KDK 306
>sp|Q57837|Y392_METJA Zinc metalloprotease MJ0392 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0392 PE=1 SV=1
Length = 339
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 29 TRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLD 88
+RV+ E + +MT NP +V D E L M++ K+ PVVENG+++ +
Sbjct: 208 SRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIEEFLDFMLKHKYFGYPVVENGKLVGCIG 267
Query: 89 IAKC 92
I
Sbjct: 268 IGNI 271
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRGDMPITC 255
+MTPNP T D I + L M K+ PVV+ G + + C
Sbjct: 225 IMTPNPVYVTPDMSIEEFLDFMLKHKYFGYPVVENGKL-VGC 265
>sp|B1L5U5|IMDH_KORCO Inosine-5'-monophosphate dehydrogenase OS=Korarchaeum cryptofilum
(strain OPF8) GN=guaB PE=3 SV=1
Length = 476
Score = 38.5 bits (88), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+T+SP D+V A + M E +S V V K GI+T +D+ ++N S LV+
Sbjct: 97 VITVSPEDSVEEARRLMREHGISGLPVIVGRKLVGIVTRRDVYF---AEN---GSLLVKD 150
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 246
+MT +P + +A IM K LPVV
Sbjct: 151 IMTKDPITVGPEITPQEARKIMARYKIEKLPVV 183
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPV 77
L GI+T +D+ A +L V +MT++P V + EA + M + K LPV
Sbjct: 129 LVGIVTRRDV---YFAENGSL---LVKDIMTKDPITVGPEITPQEARKIMARYKIEKLPV 182
Query: 78 V-ENGEVIALLDIAKCLY 94
V E+GE+I L+ Y
Sbjct: 183 VSESGELIGLVTAKDVFY 200
>sp|Q8FDQ2|KPSF_ECOL6 Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=kpsF PE=1 SV=2
Length = 327
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 9 LLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
+++ D+ L GI+TD D+ R + +E +L +++MTR P + DT+ +EA +KM
Sbjct: 245 VMVEDAEGGLAGIITDGDL-RRFMEKEGSLTSATAAQMMTREPLTLPEDTMIIEAEEKM 302
>sp|Q47334|KPSF5_ECOLX Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli GN=kpsF
PE=3 SV=1
Length = 327
Score = 37.7 bits (86), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 9 LLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKM 67
+++ D+ L GI+TD D+ R + +E +L +++MTR P + DT+ +EA +KM
Sbjct: 245 VMVEDAEGGLAGIITDGDL-RRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKM 302
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 37.7 bits (86), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 98 ARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFR-PSLSTIIPEKSKVVT 156
A M+ E A+A A EG G + N IE E++ R I E V+T
Sbjct: 53 AAMDTVTEWEMAVAMAREG-----GLGVIHRNMSIEEQVEQVKRVKKAERFIVED--VIT 105
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
ISP +TV A M + + V K GI++ KDI R + LV+++MT
Sbjct: 106 ISPEETVDFALFLMEKHDIDGLPVVENEKVVGIISKKDIAAR--------EGKLVKELMT 157
Query: 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDR 248
+ + + +AL IM + + LPVVD+
Sbjct: 158 KDVITVPENIEVEEALKIMIENRIDRLPVVDK 189
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +D L + + N + GI++ KDIA ARE L V ++MT++ V +
Sbjct: 119 MEKHDIDGLPVVE-NEKVVGIISKKDIA----AREGKL----VKELMTKDVITVPENIEV 169
Query: 61 VEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIAR 99
EAL+ M++ + LPVV+ G +I L+ + D +AR
Sbjct: 170 EEALKIMIENRIDRLPVVDKEGRLIGLI----TMSDLVAR 205
>sp|Q9HVW0|KDSD_PSEAE Arabinose 5-phosphate isomerase KdsD OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=kdsD PE=1 SV=1
Length = 326
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D + L GI TD D+ R + R +++ + + +VMT + V ++ LA EAL+ M K
Sbjct: 241 DEHGKLAGIFTDGDL-RRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKI 299
Query: 73 RHLPVVE 79
L VV+
Sbjct: 300 GALVVVD 306
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 158 SPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217
S T ++ T+K L + + V+ K GI T D L R + + + +++VMT
Sbjct: 221 SLTGALMEMTRKGLGM---TVVLDEHGKLAGIFTDGD-LRRALDRGIDVRQVTIDQVMTV 276
Query: 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRGDMPITCYS 257
+ + + +AL IM D K L VVD D P+ +
Sbjct: 277 HGKTVRAEILAAEALKIMEDNKIGALVVVDADDRPVGALN 316
>sp|O34921|YTOI_BACSU Uncharacterized protein YtoI OS=Bacillus subtilis (strain 168)
GN=ytoI PE=4 SV=1
Length = 439
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 11 LTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG 70
+ D + GILT KDIA + N + KVMT+NP V+ T A Q MV
Sbjct: 227 VVDDQMKIHGILTSKDIA----GHDRN---ASIEKVMTKNPVTVIGKTSVASAAQMMVWE 279
Query: 71 KFRHLPVVENGE----VIALLDIAKCLYDAIARMERAAEK 106
LPV + + +I+ D+ K L I + + EK
Sbjct: 280 GIEVLPVTDGHQKLIGMISRQDVLKAL-QMIQKQPQVGEK 318
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
+ V +SP D + +K E VV + K GILTSKDI +N +
Sbjct: 200 RTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTSKDIAGH--DRNAS-----I 252
Query: 212 EKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
EKVMT NP T + A +M LPV D
Sbjct: 253 EKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTD 288
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +D L + + + ++ GI+T KDIA R E V ++MTR V
Sbjct: 119 MEKHGIDGLPVVEEDRVV-GIITKKDIAAR--------EGRTVKELMTREVITVPESVDV 169
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIARMERA----AEKGKAIAAA 113
EAL+ M++ + LPVV E+G+++ L+ + D +AR + EKG+ + AA
Sbjct: 170 EEALKIMMENRIDRLPVVNEDGKLVGLI----TMSDLVARKKYKNAVRNEKGELLVAA 223
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 16/98 (16%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V+TI+P +T+ A M + + V E++ GI+T KDI R + V++
Sbjct: 103 VITIAPDETIDYALFLMEKHGIDGLPVVEEDRVVGIITKKDIAAR--------EGRTVKE 154
Query: 214 VMTPN----PECATIDTPIVDALHIMHDGKFLHLPVVD 247
+MT PE ++ +AL IM + + LPVV+
Sbjct: 155 LMTREVITVPESVDVE----EALKIMMENRIDRLPVVN 188
>sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0922 PE=1 SV=1
Length = 138
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M ++ +L + D + GI+T DI +I + LE T + VMT++ + D
Sbjct: 34 MLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLE-TTIGDVMTKDVITIHEDASI 92
Query: 61 VEALQKM-VQGK----FRHLPVVE-NGEVIALL 87
+EA++KM + GK LPVV+ N +++ ++
Sbjct: 93 LEAIKKMDISGKKEEIINQLPVVDKNNKLVGII 125
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T + V+ A +KML+ ++SS V+ ENK GI+T+ DI +I ++T+ +
Sbjct: 18 VITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGD 77
Query: 213 KVMTPNPECATIDTPIVDALHIMH-DGK----FLHLPVVDRGD 250
VMT + D I++A+ M GK LPVVD+ +
Sbjct: 78 -VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNN 119
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 98 ARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFR-PSLSTIIPEKSKVVT 156
A M+ E A+A A EG G + N IE E++ R +I E V+T
Sbjct: 53 AAMDTVTEWEMAVAMAREG-----GLGVIHRNMGIEEQVEQVKRVKRAERLIVED--VIT 105
Query: 157 ISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216
I+P +TV A M + + V + K GI+T KDI R + LV+++MT
Sbjct: 106 IAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAR--------EGKLVKELMT 157
Query: 217 PN----PECATIDTPIVDALHIMHDGKFLHLPVVD-RGDM 251
PE ++ +AL IM + + LPVVD RG +
Sbjct: 158 KEVITVPESIEVE----EALKIMIENRIDRLPVVDERGKL 193
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
M +D L + + ++ GI+T KDIA ARE L V ++MT+ V
Sbjct: 119 MEKHGIDGLPVVEDEKVV-GIITKKDIA----AREGKL----VKELMTKEVITVPESIEV 169
Query: 61 VEALQKMVQGKFRHLPVV-ENGEVIALLDIAKCLYDAIAR 99
EAL+ M++ + LPVV E G+++ L+ + D +AR
Sbjct: 170 EEALKIMIENRIDRLPVVDERGKLVGLI----TMSDLVAR 205
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 33/200 (16%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLE-ETPVSKVMTRNPTFVLSDTL 59
M R + AL + D + + GI++++ VI+ N+E V ++MT ++
Sbjct: 109 MVERGIGALAVVDEDLRVVGIVSER----HVISLLANVETHVKVKEIMTSEVVYLSPMDS 164
Query: 60 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119
E ++ M + + R LP+V E+ ++ I L ++R + A + +AV
Sbjct: 165 LFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVL-SYVSREDVLARLKEGSRSAV----- 218
Query: 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAV 179
+ T P +I + +P V+ + V +A M + + + V
Sbjct: 219 -YDT----PLVYISS------KP-----------VLAVEDDVDVGLAVSLMKKHGIGALV 256
Query: 180 VTVENKPRGILTSKDILMRV 199
VT + KPRGI+T +D+L R+
Sbjct: 257 VTHDGKPRGIVTERDVLTRL 276
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLV 211
S+VV +SP D++ + M E R+ + + RGI+T KD+L V +++ A
Sbjct: 154 SEVVYLSPMDSLFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVLSYVSREDVLAR---- 209
Query: 212 EKVMTPNPECATIDTPIV 229
+ A DTP+V
Sbjct: 210 ---LKEGSRSAVYDTPLV 224
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 18 LCGILTDKDIATRVIA-RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLP 76
L GI+TD+D+ R IA ++ N ++ ++ MT P V D E L M + R +P
Sbjct: 46 LVGIVTDRDLVLRGIAIKKPNSQK--ITDAMTEKPVSVEEDASVDEVLHLMASHQLRRIP 103
Query: 77 VVENGEVIALLDIAKCLYDAIARMERAAEK-GKAIAAAVEGVEKHWG 122
V +N ++ ++ + ++ E+ E+ G A++ EG + G
Sbjct: 104 VTKNKKLTGIVTLGD-----LSLSEQTNERAGSALSDISEGDNREEG 145
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 161 DTVLMATKKMLELRLSSAVVTVENKPR--GILTSKDILMRVISQNLPADSTLVEKVMTPN 218
D V A KM + + + V E+ GI+T +D+++R I+ P +S + MT
Sbjct: 19 DNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKP-NSQKITDAMTEK 77
Query: 219 PECATIDTPIVDALHIMHDGKFLHLPV 245
P D + + LH+M + +PV
Sbjct: 78 PVSVEEDASVDEVLHLMASHQLRRIPV 104
>sp|Q57976|M556_METJA Methylated protein MJ0556 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0556 PE=1 SV=3
Length = 174
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIAR-ELNLEETPVSKVMTRNPTFVLSDTL 59
M + + + D ++ G +T ++I + + LN V +VM +NP + +D
Sbjct: 49 MIKHNISGMPVVDDRGVMIGFITLREIRKYMTSHPYLN-----VGEVMLKNPPYTTADED 103
Query: 60 AVEALQKMVQG--KFRHLPVVENGE----------VIALLDIAKCLYDAIAR 99
+ A +KM++ K LPV+ +I + DI K LY+ I +
Sbjct: 104 IITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLLYENIIK 155
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
V+T+SP DTV A M +S VV E+K GI+T +D+ + + + V+
Sbjct: 100 VITVSPDDTVGEAINVMETYSISGLPVVDNEDKLVGIITHRDV------KAIEDKTKKVK 153
Query: 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
VMT + CA D +AL +M+ + LP+VD
Sbjct: 154 DVMTKDVVCAKEDVEEEEALELMYANRVERLPIVD 188
>sp|Q9Z826|Y526_CHLPN Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547
OS=Chlamydia pneumoniae GN=CPn_0526 PE=3 SV=1
Length = 329
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 178 AVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHD 237
+V + + GI T D+ + S S +EKVMT NP C T D+ I AL +M
Sbjct: 237 CIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLEKVMTANPRCITEDSDIAIALQLMES 296
Query: 238 GKFLH-LPVVDR 248
+ LPV+D
Sbjct: 297 SSPVAVLPVLDN 308
Score = 30.8 bits (68), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+A + + D L GI TD D+ + + + + KVMT NP + D+
Sbjct: 228 FSAYGCGCVCIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLEKVMTANPRCITEDSDI 287
Query: 61 VEALQKMVQGK-FRHLPVVENGE 82
ALQ M LPV++N E
Sbjct: 288 AIALQLMESSSPVAVLPVLDNEE 310
>sp|Q5FUK3|RSMH_GLUOX Ribosomal RNA small subunit methyltransferase H OS=Gluconobacter
oxydans (strain 621H) GN=rsmH PE=3 SV=1
Length = 323
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 61 VEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG-VEK 119
+EAL G++ G A+L+ A C DAI R A E+G A+A G +
Sbjct: 20 LEALSPRAGGRYLDGTFGGGGYARAILNAADCTLDAIDRDPAAIERGNAMAVQANGRLRM 79
Query: 120 HWGT 123
H GT
Sbjct: 80 HQGT 83
>sp|Q58799|Y1404_METJA Uncharacterized protein MJ1404 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1404 PE=4 SV=1
Length = 421
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRGDMPITCY 256
V+++MT + T DTP+ AL IM + F HL VVD+ D Y
Sbjct: 9 VKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYY 54
Score = 34.3 bits (77), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---------------------- 79
PV ++MT++ V DT +AL M + F HL VV+
Sbjct: 8 PVKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYYLISMRDLLLASST 67
Query: 80 NGEVIALLDIAKCLY------DAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIE 133
+ EV +L+ A C++ DA+ M + G+ A V V K G I+ +
Sbjct: 68 DEEVRSLMYKAHCVHEDTPFLDAVCEM---LDSGQRAAPIVNNVGKMVGI-ITDYDIMAR 123
Query: 134 TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTS 192
+ ++ + + T I ++ V+TI+ D++ A M + + VV E P G++T
Sbjct: 124 AAKSKIMKDTKVTKIMTRN-VITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTE 182
Query: 193 KDIL 196
DIL
Sbjct: 183 VDIL 186
>sp|Q9M1T1|SETH3_ARATH Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana
GN=SETH3 PE=2 SV=1
Length = 350
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLA 60
+ ++ LL+ D ++ L G TD D+ + A + + V ++ R P + +T+A
Sbjct: 251 LTSKGCGCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRTIGPETMA 310
Query: 61 VEALQKMVQ--GKFRHLPVV-ENGEVIALLDI 89
VEA++KM + LPVV E+ +I ++ +
Sbjct: 311 VEAMKKMESPPSPVQFLPVVNEDNTLIGIVTL 342
>sp|Q57647|Y188_METJA Uncharacterized protein MJ0188 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0188 PE=4 SV=1
Length = 265
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVE 212
KVVT+S +TV K + E +S V K GI++ DI+ + D+ VE
Sbjct: 12 KVVTVSKDNTVKDVIKLLKETGHNSFPVVENGKLIGIVSVHDIVGK-------DDNEKVE 64
Query: 213 KVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPVVD 247
VMT + T D I+D IM F LPVVD
Sbjct: 65 NVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVD 101
>sp|O34994|CCPN_BACSU Transcriptional repressor CcpN OS=Bacillus subtilis (strain 168)
GN=ccpN PE=1 SV=1
Length = 212
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP--TFVLSDT 58
M V L + D +A+L G+L+ KD+ I ++ L PV +MTR P T +
Sbjct: 103 MFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQ-ELTSVPVHIIMTRMPNITVCRRED 161
Query: 59 LAVEALQKMVQGKFRHLPVVEN 80
++ + +++ + LPV+++
Sbjct: 162 YVMDIAKHLIEKQIDALPVIKD 183
>sp|P38697|IMDH2_YEAST Inosine-5'-monophosphate dehydrogenase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD2 PE=1
SV=1
Length = 523
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 155 VTISPTDTVLMATKKMLELRLSSAVVTVENKPR----GILTSKDILMRVISQNLPADSTL 210
+ ISPT TV A + + VT + K G++TS+DI Q + +S L
Sbjct: 126 IVISPTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI------QFVEDNSLL 179
Query: 211 VEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
V+ VMT NP + + I+ K L VVD
Sbjct: 180 VQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVD 216
>sp|Q9HLK8|IMDH_THEAC Inosine-5'-monophosphate dehydrogenase OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=guaB PE=3 SV=1
Length = 485
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEK 213
V TISP + +A M ++ V ++K GI+T +D + + + +V
Sbjct: 101 VYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRD--LEFVKKGSSVSDVMVRD 158
Query: 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
V+T PE ID +A+ I+H + LP+VD
Sbjct: 159 VITA-PENVDID----EAIEILHKNRIEKLPLVD 187
>sp|Q9HQU4|IMDH_HALSA Inosine-5'-monophosphate dehydrogenase OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=guaB PE=3
SV=1
Length = 527
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 147 IIPEKSKVVTISPTDTVLMATKKMLELRLSSA-VVTVENKPRGILTSKDI--LMRVISQN 203
++ ++ VVT +P TV + M +S A VV ++ RGI+++ DI + V
Sbjct: 132 LVIDRENVVTAAPEQTVEAVDEMMDRSDVSGAPVVDDDDTVRGIISATDIRPYLEV---- 187
Query: 204 LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD 247
+S V + MT A D DAL +M++ K +P+V+
Sbjct: 188 --GESDAVREAMTDEVITAPEDITARDALELMYEHKIERVPIVN 229
>sp|Q8FEN7|GUTQ_ECOL6 Arabinose 5-phosphate isomerase GutQ OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=gutQ PE=3 SV=1
Length = 321
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D L+ G+ TD D+ ++ TPV++ MT T + S + A++A + +++ K
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGG--GALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKI 294
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDA 96
PVV ENG++ +++ + Y A
Sbjct: 295 TAAPVVDENGKLTGAINL-QDFYQA 318
>sp|Q8X9J0|KDSD_ECO57 Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O157:H7
GN=kdsD PE=3 SV=1
Length = 328
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
++ D N ++ GI TD D+ RV +++ + ++ VMT V LAVEAL M
Sbjct: 241 VICDDNMMIEGIFTDGDL-RRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLM-- 297
Query: 70 GKFRHLPVV 78
+ RH+ V
Sbjct: 298 -QSRHITSV 305
>sp|O84404|Y399_CHLTR Uncharacterized protein CT_399 OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=CT_399 PE=3 SV=1
Length = 328
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 18 LCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGK-FRHLP 76
L GI TD D+ + ++ P+ ++MTRNP + D+ + +L+ M G LP
Sbjct: 244 LLGIFTDGDLRRGLSEYGGDILAYPLQQIMTRNPKVISEDSDVLLSLEMMESGNPVTVLP 303
Query: 77 VVE 79
VV+
Sbjct: 304 VVD 306
>sp|P45395|KDSD_ECOLI Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli (strain
K12) GN=kdsD PE=1 SV=1
Length = 328
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
++ D N ++ GI TD D+ RV +++ + ++ VMT V LAVEAL M
Sbjct: 241 VICDDNMMIEGIFTDGDL-RRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLM-- 297
Query: 70 GKFRHLPVV 78
+ RH+ V
Sbjct: 298 -QSRHITSV 305
>sp|Q83JF4|KDSD_SHIFL Arabinose 5-phosphate isomerase KdsD OS=Shigella flexneri GN=kdsD
PE=3 SV=2
Length = 328
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 10 LLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQ 69
++ D N ++ GI TD D+ RV +++ + ++ VMT V LAVEAL M
Sbjct: 241 VICDDNMMIEGIFTDGDL-RRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLM-- 297
Query: 70 GKFRHLPVV 78
+ RH+ V
Sbjct: 298 -QSRHITSV 305
>sp|Q8Z4C7|GUTQ_SALTI Arabinose 5-phosphate isomerase GutQ OS=Salmonella typhi GN=gutQ
PE=3 SV=1
Length = 321
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D ++ G+ TD D+ ++ TPVS+ MT N + + + A++A + +++ K
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGG--GALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKI 294
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDA 96
PVV ENG++ +++ + Y A
Sbjct: 295 TAAPVVDENGKLTGAINL-QDFYQA 318
>sp|Q8ZMJ9|GUTQ_SALTY Arabinose 5-phosphate isomerase GutQ OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=gutQ PE=3 SV=2
Length = 321
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D ++ G+ TD D+ ++ TPVS+ MT N + + + A++A + +++ K
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGG--GALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKI 294
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDA 96
PVV ENG++ +++ + Y A
Sbjct: 295 TAAPVVDENGKLTGAINL-QDFYQA 318
>sp|P17115|GUTQ_ECOLI Arabinose 5-phosphate isomerase GutQ OS=Escherichia coli (strain
K12) GN=gutQ PE=1 SV=3
Length = 321
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D+ + G+ TD D+ ++ TPV++ MT T + S + A++A + +++ K
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGG--GALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKI 294
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDA 96
PVV ENG++ +++ + Y A
Sbjct: 295 TAAPVVDENGKLTGAINL-QDFYQA 318
>sp|Q8X4S5|GUTQ_ECO57 Arabinose 5-phosphate isomerase GutQ OS=Escherichia coli O157:H7
GN=gutQ PE=3 SV=3
Length = 321
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 13 DSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKF 72
D+ + G+ TD D+ ++ TPV++ MT T + S + A++A + +++ K
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGG--GALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKI 294
Query: 73 RHLPVV-ENGEVIALLDIAKCLYDA 96
PVV ENG++ +++ + Y A
Sbjct: 295 TAAPVVDENGKLTGAINL-QDFYQA 318
>sp|Q8CMQ7|IMDH_STAES Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=guaB PE=3 SV=1
Length = 488
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 1 MAARRVDALLLTDS--NALLCGILTDKDIATRVIARELNLEETPVSKVMTRNP--TFVLS 56
M R+ + + D+ + L GILT++D+ R + +S VMT++ T +
Sbjct: 115 MGKYRISGVPIVDNQEDRKLIGILTNRDL------RFIEDFSIKISDVMTKDNLITAPVG 168
Query: 57 DTLAVEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYDAIARMERAAEKGKAIAAA 113
TL EA + + K LP+VENG + L+ DI K L A + E G+ +AAA
Sbjct: 169 TTLD-EAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPYAAKD---EHGRLLAAA 224
Query: 114 VEGVEK 119
G K
Sbjct: 225 AIGTSK 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,223,056
Number of Sequences: 539616
Number of extensions: 3536225
Number of successful extensions: 11152
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 11020
Number of HSP's gapped (non-prelim): 165
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)