BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025011
(259 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 127/228 (55%), Gaps = 6/228 (2%)
Query: 12 VSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-NWKTCLRIAAET 70
+S H ++V ++G C E +L+Y+++ NG L H++ + +W+ L I
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 71 ASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTF 130
A L YLH+ A IIH DVKS N+LLD+N+ K+ DFG S + +QT + GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 131 VNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIENN 190
+DPEY I G+LTEKSDVYSFGV+L E+L + + E +++ ++ + S N
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA--RSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 191 SLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELD 238
L QI++ +AD+ E + A KCL+LS RP+M V +L+
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 6/228 (2%)
Query: 12 VSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-NWKTCLRIAAET 70
+S H ++V ++G C E +L+Y+++ NG L H++ + +W+ L I
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 71 ASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTF 130
A L YLH+ A IIH DVKS N+LLD+N+ K+ DFG S + QT + GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 131 VNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIENN 190
+DPEY I G+LTEKSDVYSFGV+L E+L + + E +++ ++ + S N
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS--AIVQSLPREMVNLAEWAVESHNNG 263
Query: 191 SLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELD 238
L QI++ +AD+ E + A KCL+LS RP+M V +L+
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 129/230 (56%), Gaps = 2/230 (0%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK-SSQVLRNWKTC 63
FQ E+ ++S H+N++++ G C+ LLVY ++ NG++ + ++ SQ +W
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
RIA +A L YLH P IIH DVK+ N+LLD+ ++A V DFG + L+ +
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYF 183
+ GT ++ PEY+ TGK +EK+DV+ +GV+L EL+TG + LA+++ + ++ +
Sbjct: 202 AVR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
++ L +++ + + EE+E + +A C S RP M +V
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 136/250 (54%), Gaps = 2/250 (0%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK-SSQVLRNWKTC 63
FQ E+ ++S H+N++++ G C+ LLVY ++ NG++ + ++ SQ +W
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
RIA +A L YLH P IIH DVK+ N+LLD+ ++A V DFG + L+ +
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYF 183
+ G ++ PEY+ TGK +EK+DV+ +GV+L EL+TG + LA+++ + ++ +
Sbjct: 194 AVR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRLKIS 243
++ L +++ + + EE+E + +A C S RP M +V L+ ++
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
Query: 244 HENYEHRRTE 253
E ++ E
Sbjct: 313 ERWEEWQKEE 322
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+ Q F E++V+++ H+N+V++LG + LVY ++PNG+L D + +W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IA A+ +++LH + IH D+KS N+LLD+ + AK++DFG + QT
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
M ++ +GT + PE + G++T KSD+YSFGV+L E++TGL A +E
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLP-------AVDEH-REP 240
Query: 181 QYFLYSIENNSLRQILNFQVAD----ESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEE 236
Q L E + D +++ +E + +AS+CL +RP +K+V +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 237 LDRLKIS 243
L + S
Sbjct: 301 LQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 16/247 (6%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+ Q F E++V+++ H+N+V++LG + LVY ++PNG+L D + +W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IA A+ +++LH + IH D+KS N+LLD+ + AK++DFG + QT
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
M + +GT + PE + G++T KSD+YSFGV+L E++TGL A +E
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLP-------AVDEH-REP 240
Query: 181 QYFLYSIENNSLRQILNFQVAD----ESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEE 236
Q L E + D +++ +E + +AS+CL +RP +K+V +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 237 LDRLKIS 243
L + S
Sbjct: 301 LQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 16/247 (6%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+ Q F E++V+++ H+N+V++LG + LVY ++PNG+L D + +W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IA A+ +++LH + IH D+KS N+LLD+ + AK++DFG + Q
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
M + +GT + PE + G++T KSD+YSFGV+L E++TGL A +E
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLP-------AVDEH-REP 234
Query: 181 QYFLYSIENNSLRQILNFQVAD----ESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEE 236
Q L E + D +++ +E + +AS+CL +RP +K+V +
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 294
Query: 237 LDRLKIS 243
L + S
Sbjct: 295 LQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 16/241 (6%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+ Q F E++V ++ H+N+V++LG + LVY + PNG+L D + +W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IA A+ +++LH + IH D+KS N+LLD+ + AK++DFG + Q
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
++ +GT PE + G++T KSD+YSFGV+L E++TGL A +E
Sbjct: 181 VXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLP-------AVDEH-REP 231
Query: 181 QYFLYSIENNSLRQILNFQVAD----ESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEE 236
Q L E + D +++ +E +AS+CL +RP +K+V +
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQL 291
Query: 237 L 237
L
Sbjct: 292 L 292
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 119/245 (48%), Gaps = 32/245 (13%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q FQ E+ ++S +NH N+VK+ G L P +V EFVP G L+ + DK+ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSV 123
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYK--AKVADFGSSVLISSD 117
LR+ + A ++Y+ + +PPI+H D++S N+ LD+N AKVADFG +S
Sbjct: 124 KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQ 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGK--LTEKSDVYSFGVLLAELLTGLKPGSGMALASNE 175
+ +G F + PE + + TEK+D YSF ++L +LTG P + +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
I+M++ LR + E + V L C S ++RP + +
Sbjct: 238 FINMIR-------EEGLRPTI-----PEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVK 282
Query: 236 ELDRL 240
EL L
Sbjct: 283 ELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 32/245 (13%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q FQ E+ ++S +NH N+VK+ G L P +V EFVP G L+ + DK+ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSV 123
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYK--AKVADFGSSVLISSD 117
LR+ + A ++Y+ + +PPI+H D++S N+ LD+N AKVADFG S
Sbjct: 124 KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----LSQ 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGK--LTEKSDVYSFGVLLAELLTGLKPGSGMALASNE 175
+ +G F + PE + + TEK+D YSF ++L +LTG P + +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
I+M++ LR + E + V L C S ++RP + +
Sbjct: 238 FINMIR-------EEGLRPTI-----PEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVK 282
Query: 236 ELDRL 240
EL L
Sbjct: 283 ELSEL 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ ++ ++ H N+V +GA + +V E++ G+L+ +H ++ + + L
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + A ++YLH+ +PPI+H D+KS N+L+D Y KV DFG S L +S +
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSK 197
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALA 172
GT + PE + EKSDVYSFGV+L EL T +P + A
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ ++ ++ H N+V +GA + +V E++ G+L+ +H ++ + + L
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + A ++YLH+ +PPI+H ++KS N+L+D Y KV DFG S L +S T +++
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS---TFLSS 196
Query: 125 KK-IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALA 172
K GT + PE + EKSDVYSFGV+L EL T +P + A
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLL 115
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 116 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 173 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q FQ E+ ++S +NH N+VK+ G L P +V EFVP G L+ + DK+ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSV 123
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYK--AKVADFGSSVLISSD 117
LR+ + A ++Y+ + +PPI+H D++S N+ LD+N AKVADF S
Sbjct: 124 KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFS-----LSQ 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGK--LTEKSDVYSFGVLLAELLTGLKPGSGMALASNE 175
+ +G F + PE + + TEK+D YSF ++L +LTG P + +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
I+M++ LR + E + V L C S ++RP + +
Sbjct: 238 FINMIR-------EEGLRPTI-----PEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVK 282
Query: 236 ELDRL 240
EL L
Sbjct: 283 ELSEL 287
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 120 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 127
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 128 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 185 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 232
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 120 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 177 AKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 115
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 116 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 173 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 120 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 118
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 119 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 176 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 223
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 116
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 117 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 120 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 116
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 117 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 116
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 117 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 174 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 120 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 115 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 172 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 26/240 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F ELR +S++NH N+VK+ GACL LV E+ G+L++ +H
Sbjct: 46 KAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAH 103
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSDNQTA 121
+ + + + YLHS +IH D+K N+LL K+ DFG++ D QT
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTH 159
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQ 181
MT K G+ + PE +EK DV+S+G++L E++T KP + +
Sbjct: 160 MTNNK-GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR------ 212
Query: 182 YFLYSIENNSLRQIL-NFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
++++ N + ++ N ES L ++C S +RP+M+++ + + L
Sbjct: 213 -IMWAVHNGTRPPLIKNLPKPIES----------LMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 113 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + K + KSDV++FGVLL E+ T G+ P G+
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 26/240 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F ELR +S++NH N+VK+ GACL LV E+ G+L++ +H
Sbjct: 47 KAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAH 104
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSDNQTA 121
+ + + + YLHS +IH D+K N+LL K+ DFG++ D QT
Sbjct: 105 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTH 160
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQ 181
MT K G+ + PE +EK DV+S+G++L E++T KP + +
Sbjct: 161 MTNNK-GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR------ 213
Query: 182 YFLYSIENNSLRQIL-NFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
++++ N + ++ N ES L ++C S +RP+M+++ + + L
Sbjct: 214 -IMWAVHNGTRPPLIKNLPKPIES----------LMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 113 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + K + KSDV++FGVLL E+ T G+ P G+
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 360
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH ++ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 361 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 418 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 465
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + N L
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLL 318
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH ++ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 319 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 376 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 423
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 113 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + K + KSDV++FGVLL E+ T G+ P G+
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C ++ EF+ G L D++ + + Q + L
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLL 321
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH ++ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 322 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + K + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 379 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 426
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +I H N+V++LG C +V E++P G L D++ + + + + L
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLL 133
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+A + +SA++YL IH D+ + N L+ +N+ KVADFG S L++ D TA
Sbjct: 134 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG 190
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
K PE + + KSDV++FGVLL E+ T G+ P G+ L+
Sbjct: 191 AKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK--SSQVLRNWKTC 63
+ E ++ + + H N++ + G CL+ LV EF G L + K +L NW
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW--- 110
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDD--------NYKAKVADFGSSVLIS 115
A + A ++YLH A PIIH D+KS+N+L+ N K+ DFG ++
Sbjct: 111 ---AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG----LA 163
Query: 116 SDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGM-ALASN 174
+ G + + PE + ++ SDV+S+GVLL ELLTG P G+ LA
Sbjct: 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223
Query: 175 EGISM 179
G++M
Sbjct: 224 YGVAM 228
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRL-PQ 105
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 106 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR 162
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 163 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 209
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQ 108
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 109 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 165
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 166 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ +I H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQ 281
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 282 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 339 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVLR 58
Q + + ++H ++V++LG C + + LV +++P G+L DH+ Q+L
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL 136
Query: 59 NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDN 118
NW + A + YL ++H ++ + NVLL + +VADFG + L+ D+
Sbjct: 137 NW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGI 177
+ + ++ + E + GK T +SDV+S+GV + EL+T G +P +G+ LA
Sbjct: 188 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---- 243
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
V L E + QI V + KC + RPT K+++ E
Sbjct: 244 --VPDLLEKGERLAQPQICTID------------VYMVMVKCWMIDENIRPTFKELANEF 289
Query: 238 DRLKISHENY 247
R+ Y
Sbjct: 290 TRMARDPPRY 299
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQ 281
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 282 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 339 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQ 104
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 105 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 161
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 162 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVLR 58
Q + + ++H ++V++LG C + + LV +++P G+L DH+ Q+L
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL 118
Query: 59 NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDN 118
NW + A + YL ++H ++ + NVLL + +VADFG + L+ D+
Sbjct: 119 NW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGI 177
+ + ++ + E + GK T +SDV+S+GV + EL+T G +P +G+ LA
Sbjct: 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---- 225
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
V L E + QI V + KC + RPT K+++ E
Sbjct: 226 --VPDLLEKGERLAQPQICTIDVYM------------VMVKCWMIDENIRPTFKELANEF 271
Query: 238 DRLKISHENY 247
R+ Y
Sbjct: 272 TRMARDPPRY 281
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQ 106
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 107 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 163
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 164 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRL-PQ 281
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 282 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 339 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLR-LPQ 364
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 365 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 422 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 96/170 (56%), Gaps = 9/170 (5%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H +S+ K
Sbjct: 53 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH--ASETKFEMKK 109
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 110 LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ 166
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + + + +SDVY+FG++L EL+TG P S +
Sbjct: 167 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 216
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRL-PQ 112
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ ++A+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 113 LVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTAR 169
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 170 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
EL+++S + H+N+V +LGAC L++ E+ G L + + KS +VL I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLET-DPAFAI 156
Query: 67 AAETASALDYLHSS----------ASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS 116
A TAS D LH S AS IH DV + NVLL + + AK+ DFG + I +
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNE 175
D+ + + PE + T +SDV+S+G+LL E+ + GL P G+ + S
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 275
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
Y + + +Q+A + + + + C +L RPT +Q+
Sbjct: 276 --------FYKLVKDG------YQMAQPAFAP--KNIYSIMQACWALEPTHRPTFQQICS 319
Query: 236 EL 237
L
Sbjct: 320 FL 321
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + ++ + LR
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRL-PQ 112
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ ++A+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 113 LVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 169
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 170 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQ 282
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+++ N+L+ +N KVADFG LI + TA
Sbjct: 283 LVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTAR 339
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 340 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 386
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E +V+ ++ H+ +V++ E + +V E++ G+L D + + + LR
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ +AA+ AS + Y+ +H D+ + N+L+ +N KVADFG + LI + TA
Sbjct: 116 LVDMAAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL T G P GM
Sbjct: 173 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H +S+ K
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH--ASETKFEMKK 121
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + S + +
Sbjct: 122 LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
+ G+ + + PE + + + +SDVY+FG++L EL+TG P S
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQR 113
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL N + K+ADFG SV S +T
Sbjct: 114 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT 169
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G+ P
Sbjct: 170 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +++ ++ H +V++ E + +V E++ G+L D + D + L+ +
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKL-PNLV 108
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A+ + Y+ IH D++S N+L+ + K+ADFG + LI + TA
Sbjct: 109 DMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G+ T KSDV+SFG+LL EL+T G P GM
Sbjct: 166 AKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q F++E+ V+ + H N++ +G ++ + V ++ +L+ H+H +S+ K
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLH--ASETKFEMKK 121
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + S + +
Sbjct: 122 LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
+ G+ + + PE + + + +SDVY+FG++L EL+TG P S
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 31/242 (12%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
EL+++S + H+N+V +LGAC L++ E+ G L + + KS +VL I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLET-DPAFAI 156
Query: 67 AAETASALDYLHSS----------ASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS 116
A T S D LH S AS IH DV + NVLL + + AK+ DFG + I +
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNE 175
D+ + + PE + T +SDV+S+G+LL E+ + GL P G+ + S
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 275
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
Y + + +Q+A + + + + C +L RPT +Q+
Sbjct: 276 --------FYKLVKDG------YQMAQPAFAP--KNIYSIMQACWALEPTHRPTFQQICS 319
Query: 236 EL 237
L
Sbjct: 320 FL 321
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 28/244 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWK 61
Q F E V++Q+ H N+V++LG +E K L +V E++ G+L D++ + VL
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-D 289
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
L+ + + A++YL + +H D+ + NVL+ ++ AKV+DFG + SS T
Sbjct: 290 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQ 181
K PE + K + KSDV+SFG+LL E+ + V
Sbjct: 347 KLPVKWTA-----PEALREKKFSTKSDVWSFGILLWEIYS---------------FGRVP 386
Query: 182 YFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRLK 241
Y +++ R +++ V + C L RPT Q+ E+L+ ++
Sbjct: 387 YPRIPLKDVVPRVEKGYKMDAPDGCP--PAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
Query: 242 ISHE 245
+HE
Sbjct: 445 -THE 447
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWK 61
Q F E V++Q+ H N+V++LG +E K L +V E++ G+L D++ + VL
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-D 117
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
L+ + + A++YL + +H D+ + NVL+ ++ AKV+DFG + SS T
Sbjct: 118 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + K + KSDV+SFG+LL E+ +
Sbjct: 175 KLPVKWTA-----PEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +++H +V++ G CLE LV+EF+ +G L D++ ++ + L +T L
Sbjct: 49 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL 106
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + YL ++ +IH D+ + N L+ +N KV+DFG + + D T+ T
Sbjct: 107 GMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFGVL+ E+ +
Sbjct: 164 TKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 9/168 (5%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q F++E+ V+ + H N++ +G + + + V ++ +L+ H+H + ++
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKF--QMFQ 133
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ IA +TA +DYLH+ IIH D+KS N+ L + K+ DFG + + S + +
Sbjct: 134 LIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
+ G+ + + PE + + +SDVYS+G++L EL+TG P S
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +++H +V++ G CLE LV+EF+ +G L D++ ++ + L +T L
Sbjct: 52 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL 109
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + YL + +IH D+ + N L+ +N KV+DFG + + D T+ T
Sbjct: 110 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFGVL+ E+ +
Sbjct: 167 TKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +++H +V++ G CLE LV+EF+ +G L D++ ++ + L +T L
Sbjct: 47 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL 104
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + YL + +IH D+ + N L+ +N KV+DFG + + D T+ T
Sbjct: 105 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFGVL+ E+ +
Sbjct: 162 TKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +++H +V++ G CLE LV+EF+ +G L D++ ++ + L +T L
Sbjct: 49 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL 106
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + YL + +IH D+ + N L+ +N KV+DFG + + D T+ T
Sbjct: 107 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFGVL+ E+ +
Sbjct: 164 TKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWK 61
Q F E V++Q+ H N+V++LG +E K L +V E++ G+L D++ + VL
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-D 102
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
L+ + + A++YL + +H D+ + NVL+ ++ AKV+DFG + SS T
Sbjct: 103 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + K + KSDV+SFG+LL E+ +
Sbjct: 160 KLPVKWTA-----PEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +++H +V++ G CLE LV+EF+ +G L D++ ++ + L +T L
Sbjct: 69 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL 126
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + YL + +IH D+ + N L+ +N KV+DFG + + D T+ T
Sbjct: 127 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFGVL+ E+ +
Sbjct: 184 TKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQR 113
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL N + K+ADFG SV S +
Sbjct: 114 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT 169
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G+ P
Sbjct: 170 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGAC-LETK---VPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
F+ E + + +NH +V + ET +P +V E+V TL D +H +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQ 119
K + + A+ AL++ H + IIH DVK N+L+ KV DFG + + S N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T IGT L PE + +SDVYS G +L E+LTG P +G
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGAC-LETK---VPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
F+ E + + +NH +V + ET +P +V E+V TL D +H +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQ 119
K + + A+ AL++ H + IIH DVK N+++ KV DFG + + S N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T IGT L PE + +SDVYS G +L E+LTG P +G
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWK 61
Q F E V++Q+ H N+V++LG +E K L +V E++ G+L D++ + VL
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-D 108
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
L+ + + A++YL + +H D+ + NVL+ ++ AKV+DFG + SS T
Sbjct: 109 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 165
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFG+LL E+ +
Sbjct: 166 KLPVKWTA-----PEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 76 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 132
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 133 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 187
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 188 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 43/256 (16%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N F E +++ ++H ++V++LG CL + LV + +P+G L +++H+ SQ+L
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++I A + YL ++H D+ + NVL+ K+ DFG + L+ D
Sbjct: 120 LNW--CVQI----AKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALAS--- 173
+ + E + K T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 230
Query: 174 --NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMK 231
+G + Q + +I+ V + KC + RP K
Sbjct: 231 LLEKGERLPQPPICTID-----------------------VYMVMVKCWMIDADSRPKFK 267
Query: 232 QVSEELDRLKISHENY 247
+++ E R+ + Y
Sbjct: 268 ELAAEFSRMARDPQRY 283
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 43/256 (16%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N F E +++ ++H ++V++LG CL + LV + +P+G L +++H+ SQ+L
Sbjct: 84 NVEFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL 142
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++I A + YL ++H D+ + NVL+ K+ DFG + L+ D
Sbjct: 143 LNW--CVQI----AKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALAS--- 173
+ + E + K T +SDV+S+GV + EL+T G KP G+
Sbjct: 194 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 253
Query: 174 --NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMK 231
+G + Q + +I+ V + KC + RP K
Sbjct: 254 LLEKGERLPQPPICTID-----------------------VYMVMVKCWMIDADSRPKFK 290
Query: 232 QVSEELDRLKISHENY 247
+++ E R+ + Y
Sbjct: 291 ELAAEFSRMARDPQRY 306
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 133
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 134 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 188
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 189 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 51 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 107
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 108 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 162
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 163 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 110
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 111 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 165
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 166 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRN 59
Q FQ E +++ + H+++V+ G C E + L+V+E++ +G L F H +++L
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146
Query: 60 WKTC----------LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG 109
+ L +A++ A+ + YL A +H D+ + N L+ K+ DFG
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 203
Query: 110 SSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
S I S + + + + + PE ++ K T +SDV+SFGV+L E+ T G +P
Sbjct: 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRN 59
Q FQ E +++ + H+++V+ G C E + L+V+E++ +G L F H +++L
Sbjct: 64 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 123
Query: 60 WKTC----------LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG 109
+ L +A++ A+ + YL A +H D+ + N L+ K+ DFG
Sbjct: 124 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 180
Query: 110 SSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
S I S + + + + + PE ++ K T +SDV+SFGV+L E+ T G +P
Sbjct: 181 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGAC-LETK---VPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
F+ E + + +NH +V + ET +P +V E+V TL D +H +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQ 119
K + + A+ AL++ H + IIH DVK N+++ KV DFG + + S N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T IGT L PE + +SDVYS G +L E+LTG P +G
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 96/172 (55%), Gaps = 13/172 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 105
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 106 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160
Query: 121 AMTTKKIGTFVNLDPEYVIT---GKLTEKSDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + + +SDVY+FG++L EL+TG P S +
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRN 59
Q FQ E +++ + H+++V+ G C E + L+V+E++ +G L F H +++L
Sbjct: 58 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 117
Query: 60 WKTC----------LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG 109
+ L +A++ A+ + YL A +H D+ + N L+ K+ DFG
Sbjct: 118 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 174
Query: 110 SSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
S I S + + + + + PE ++ K T +SDV+SFGV+L E+ T G +P
Sbjct: 175 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGAC-LETK---VPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
F+ E + + +NH +V + ET +P +V E+V TL D +H +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQ 119
K + + A+ AL++ H + IIH DVK N+++ KV DFG + + S N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T IGT L PE + +SDVYS G +L E+LTG P +G
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGAC-LETK---VPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
F+ E + + +NH +V + ET +P +V E+V TL D +H +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQ 119
K + + A+ AL++ H + IIH DVK N+++ KV DFG + + S N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T IGT L PE + +SDVYS G +L E+LTG P +G
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 110
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 111 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 165
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 166 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGAC-LETK---VPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
F+ E + + +NH +V + ET +P +V E+V TL D +H +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 132
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQ 119
K + + A+ AL++ H + IIH DVK N+++ KV DFG + + S N
Sbjct: 133 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T IGT L PE + +SDVYS G +L E+LTG P +G
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 126
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 127 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 182
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 183 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G ++ L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S + A
Sbjct: 110 TATYIT-ELANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 135
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 136 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 191
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 192 L----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 114
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 115 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 171 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 112
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 113 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 169 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 112
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 113 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 169 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E V+ +++H +V++ G CLE LV EF+ +G L D++ ++ + L +T L
Sbjct: 50 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLL 107
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + YL + +IH D+ + N L+ +N KV+DFG + + D T+ T
Sbjct: 108 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + + KSDV+SFGVL+ E+ +
Sbjct: 165 TKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 112
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S + A
Sbjct: 113 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA 168
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 169 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S + A
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G ++ + V ++ +L+ H+H + ++++
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 105
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + + S + +
Sbjct: 106 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160
Query: 121 AMTTKKIGTFVNLDPEYVIT---GKLTEKSDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + + +SDVY+FG++L EL+TG P S +
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 113
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 114 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 169
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 170 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 106
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 107 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 162
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 163 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
FQ E +++ + H+++VK G C + ++V+E++ +G L F H + +L + +
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 63 -----------CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSS 111
L IA++ AS + YL AS +H D+ + N L+ N K+ DFG S
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 112 VLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
+ S + + + + PE ++ K T +SDV+SFGV+L E+ T G +P
Sbjct: 181 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P G ++ + S +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQR 114
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 115 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 171 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 108
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 109 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 164
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 165 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 114
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 115 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE + EK D++S GVL E L G P
Sbjct: 171 LC----GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 4 VFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKL 117
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L +AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 118 LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 174
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 175 GAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 97/175 (55%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 69 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 125
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + S + +
Sbjct: 126 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 180
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 181 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 121
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 122 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 179 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 223
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 114
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 115 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 170
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 171 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 170 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 4 VFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L
Sbjct: 62 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKL 119
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L +AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 120 LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 176
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 177 GAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 97/175 (55%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 133
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + S + +
Sbjct: 134 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 188
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 189 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVP--LLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ E+ ++ + H+N+VK G C E L+ EF+P+G+L +++ +++ N K
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQ 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ-TA 121
L+ A + +DYL S +H D+ + NVL++ ++ K+ DFG + I +D +
Sbjct: 116 QLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + PE ++ K SDV+SFGV L ELLT
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 115 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 172 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 110
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 111 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 167 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVP--LLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ E+ ++ + H+N+VK G C E L+ EF+P+G+L +++ +++ N K
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQ 127
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ-TA 121
L+ A + +DYL S +H D+ + NVL++ ++ K+ DFG + I +D +
Sbjct: 128 QLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + PE ++ K SDV+SFGV L ELLT
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +T
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 113
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 114 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 171 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 170 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 4 VFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L
Sbjct: 64 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKL 121
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L +AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 122 LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 178
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 179 GAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 97/175 (55%), Gaps = 19/175 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH--DKSSQVLRNW 60
Q F++E+ V+ + H N++ +G + ++ + V ++ +L+ H+H + ++++
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK-- 105
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ IA +TA +DYLH+ + IIH D+KS N+ L ++ K+ DFG + S + +
Sbjct: 106 --LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 160
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEK------SDVYSFGVLLAELLTGLKPGSGM 169
+ G+ + + PE + ++ +K SDVY+FG++L EL+TG P S +
Sbjct: 161 HQFEQLSGSILWMAPEVI---RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 110
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG S S +T
Sbjct: 111 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT 166
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
++ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 167 LS----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 123
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D +T+
Sbjct: 124 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 181 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 117
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 118 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 175 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 219
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 29/239 (12%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN------- 59
EL+++S + H+N+V +LGAC L++ E+ G L + + K+ L
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L +++ A + +L AS IH DV + NVLL + + AK+ DFG + I +D+
Sbjct: 159 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGIS 178
+ + PE + T +SDV+S+G+LL E+ + GL P G+ + S
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK---- 271
Query: 179 MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
Y + + +Q+A + + + + C +L RPT +Q+ L
Sbjct: 272 -----FYKLVKDG------YQMAQPAFAP--KNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 118
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 119 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 176 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 29/239 (12%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN------- 59
EL+++S + H+N+V +LGAC L++ E+ G L + + K+ L
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L +++ A + +L AS IH DV + NVLL + + AK+ DFG + I +D+
Sbjct: 151 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGIS 178
+ + PE + T +SDV+S+G+LL E+ + GL P G+ + S
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK---- 263
Query: 179 MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
Y + + +Q+A + + + + C +L RPT +Q+ L
Sbjct: 264 -----FYKLVKDG------YQMAQPAFAP--KNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 170 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 47/262 (17%)
Query: 5 FQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR----- 58
F EL V+ ++ +H N++ +LGAC L E+ P+G L D + + S+VL
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETDPAF 119
Query: 59 ----------NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADF 108
+ + L AA+ A +DYL + IH D+ + N+L+ +NY AK+ADF
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADF 176
Query: 109 GSSVLISSDNQTAMTTKKIGTFV--NLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
G S Q K +G + E + T SDV+S+GVLL E+++ G P
Sbjct: 177 G-----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
Query: 166 GSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGR 225
GM A LY R DE V L +C
Sbjct: 232 YCGMTCAE----------LYEKLPQGYRLEKPLNCDDE--------VYDLMRQCWREKPY 273
Query: 226 RRPTMKQVSEELDRLKISHENY 247
RP+ Q+ L+R+ + Y
Sbjct: 274 ERPSFAQILVSLNRMLEERKTY 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 136
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 137 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 194 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 47/262 (17%)
Query: 5 FQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR----- 58
F EL V+ ++ +H N++ +LGAC L E+ P+G L D + + S+VL
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETDPAF 129
Query: 59 ----------NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADF 108
+ + L AA+ A +DYL + IH D+ + N+L+ +NY AK+ADF
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADF 186
Query: 109 GSSVLISSDNQTAMTTKKIGTFV--NLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
G S Q K +G + E + T SDV+S+GVLL E+++ G P
Sbjct: 187 G-----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 166 GSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGR 225
GM A LY R DE V L +C
Sbjct: 242 YCGMTCAE----------LYEKLPQGYRLEKPLNCDDE--------VYDLMRQCWREKPY 283
Query: 226 RRPTMKQVSEELDRLKISHENY 247
RP+ Q+ L+R+ + Y
Sbjct: 284 ERPSFAQILVSLNRMLEERKTY 305
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 113
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 114 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 169
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 229
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 230 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 281
Query: 235 EELDRLK 241
+D+++
Sbjct: 282 LRVDQIR 288
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 29/242 (11%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
EL+++S + H+N+V +LGAC L++ E+ G L + + K L
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 67 AAETASALDYLHSS----------ASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS 116
E S+ D LH S AS IH DV + NVLL + + AK+ DFG + I +
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNE 175
D+ + + PE + T +SDV+S+G+LL E+ + GL P G+ + S
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 277
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
Y + + +Q+A + + + + C +L RPT +Q+
Sbjct: 278 --------FYKLVKDG------YQMAQPAFAP--KNIYSIMQACWALEPTHRPTFQQICS 321
Query: 236 EL 237
L
Sbjct: 322 FL 323
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 114
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 115 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 170
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 230
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 231 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 282
Query: 235 EELDRLK 241
+D+++
Sbjct: 283 LRVDQIR 289
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLL 107
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI + TA
Sbjct: 108 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 165 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 209
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 119
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 120 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 119
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 120 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 175
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 235
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 236 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 287
Query: 235 EELDRLK 241
+D+++
Sbjct: 288 LRVDQIR 294
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 146
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 147 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 202
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 262
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 263 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 314
Query: 235 EELDRLK 241
+D+++
Sbjct: 315 LRVDQIR 321
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 133
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 134 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 189
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 249
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 250 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 301
Query: 235 EELDRLK 241
+D+++
Sbjct: 302 LRVDQIR 308
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 133
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 134 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 189
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 249
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 250 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 301
Query: 235 EELDRLK 241
+D+++
Sbjct: 302 LRVDQIR 308
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 120
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 121 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 176
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 236
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 237 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 288
Query: 235 EELDRLK 241
+D+++
Sbjct: 289 LRVDQIR 295
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 137
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+GT + PE + + SD+++ G ++ +L+ GL P A NEG+
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFR----AGNEGL 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 121
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 122 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 177
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 237
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 238 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 289
Query: 235 EELDRLK 241
+D+++
Sbjct: 290 LRVDQIR 296
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 116 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 171
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 283
Query: 235 EELDRLK 241
+D+++
Sbjct: 284 LRVDQIR 290
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 119 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 174
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 235 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 286
Query: 235 EELDRLK 241
+D+++
Sbjct: 287 LRVDQIR 293
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 137
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+GT + PE + + SD+++ G ++ +L+ GL P A NEG+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEGL 241
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 146
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 147 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 204 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 119/247 (48%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ + ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIK 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 119 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 174
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 235 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 286
Query: 235 EELDRLK 241
+D+++
Sbjct: 287 LRVDQIR 293
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 116 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 171
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 283
Query: 235 EELDRLK 241
+D+++
Sbjct: 284 LRVDQIR 290
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 111
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+A+FG SV S +T
Sbjct: 112 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT 167
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 168 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTI-NKLL 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH D+++ N+L+ D K+ADFG + LI TA
Sbjct: 113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 170 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 122
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 123 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 178
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 238
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 239 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 290
Query: 235 EELDRLK 241
+D+++
Sbjct: 291 LRVDQIR 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 116 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE-FF 171
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 283
Query: 235 EELDRLK 241
+D+++
Sbjct: 284 LRVDQIR 290
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 112
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+A+FG SV S +T
Sbjct: 113 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT 168
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 169 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 111
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 112 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX 167
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 168 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ EF+P G+L +++ ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIK 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH D+ + N+L+++ + K+ DFG + ++ D +
Sbjct: 119 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX- 174
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 235 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 286
Query: 235 EELDRLK 241
+D+++
Sbjct: 287 LRVDQIR 293
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 108
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D T+
Sbjct: 109 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 166 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 50 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 107
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D T+
Sbjct: 108 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 165 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 112
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 113 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX 168
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 169 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 123
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D T+
Sbjct: 124 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 181 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 46 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 103
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D T+
Sbjct: 104 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 161 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P G ++ + S +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQR 114
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 115 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX 170
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 171 LX----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 110
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 111 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT 166
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 167 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D T+
Sbjct: 115 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 172 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 110 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX 165
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 166 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +V+ ++H+ +V++ G C + + ++ E++ NG L +++ + + + L
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLL 108
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A++YL S +H D+ + N L++D KV+DFG S + D T+
Sbjct: 109 EMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K + PE ++ K + KSD+++FGVL+ E+ +
Sbjct: 166 SKFPVRWS-PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 110/249 (44%), Gaps = 42/249 (16%)
Query: 8 ELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQV---------- 56
EL++++Q+ +H+N+V +LGAC + L++E+ G L +++ K +
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 57 ----------LRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+ ++ L A + A +++L + +H D+ + NVL+ K+
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKIC 214
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
DFG + I SD+ + + PE + G T KSDV+S+G+LL E+ + G+ P
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
Query: 166 GSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGR 225
G+ + +N Y + N + F +E + + C + R
Sbjct: 275 YPGIPVDAN---------FYKLIQNGFKMDQPFYATEE--------IYIIMQSCWAFDSR 317
Query: 226 RRPTMKQVS 234
+RP+ ++
Sbjct: 318 KRPSFPNLT 326
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 135
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 136 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD 191
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 192 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD----ETCTRFY 137
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + ++ SD+++ G ++ +L+ GL P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E + NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL + +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 34/256 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRLKISHENYEH 249
E+LDR+ N E+
Sbjct: 310 VEDLDRILTLTTNEEY 325
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG + ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 34/256 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRLKISHENYEH 249
E+LDR+ N E+
Sbjct: 310 VEDLDRILTLTTNEEY 325
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 6 QHELR----VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+H+LR + S + H N++++ G + L+ E+ P GT++ + S +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 112
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
T I E A+AL Y HS +IH D+K N+LL + K+ADFG SV S +
Sbjct: 113 TATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD 168
Query: 122 MTTKKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE +I G++ EK D++S GVL E L G P
Sbjct: 169 LC----GTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 114
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 115 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 142
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 143 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E++ NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 113
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 114 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q+ H+ +V++ + + ++ E++ NG+L D + S L L
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLL 108
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+AA+ A + ++ IH ++++ N+L+ D K+ADFG + LI + TA
Sbjct: 109 DMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 165
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
K PE + G T KSDV+SFG+LL E++T G P GM
Sbjct: 166 AKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 112
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 113 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 115
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 116 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E + NG+L F HD V++
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---- 119
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 120 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 134
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 135 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 110/262 (41%), Gaps = 47/262 (17%)
Query: 5 FQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR----- 58
F EL V+ ++ +H N++ +LGAC L E+ P+G L D + + S+VL
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETDPAF 126
Query: 59 ----------NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADF 108
+ + L AA+ A +DYL + IH ++ + N+L+ +NY AK+ADF
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADF 183
Query: 109 GSSVLISSDNQTAMTTKKIGTFV--NLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
G S Q K +G + E + T SDV+S+GVLL E+++ G P
Sbjct: 184 G-----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
Query: 166 GSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGR 225
GM A LY R DE V L +C
Sbjct: 239 YCGMTCAE----------LYEKLPQGYRLEKPLNCDDE--------VYDLMRQCWREKPY 280
Query: 226 RRPTMKQVSEELDRLKISHENY 247
RP+ Q+ L+R+ + Y
Sbjct: 281 ERPSFAQILVSLNRMLEERKTY 302
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 135
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 134
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 135 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 137
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 137
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 138
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 119
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 120 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 79 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 248
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 249 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 298
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 299 VEDLDRI 305
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 138
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 135
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 135
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E +++ + H+++VK G C+E ++V+E++ +G L F H + ++
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 63 --------CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
L IA + A+ + YL AS +H D+ + N L+ +N K+ DFG S +
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
Query: 115 SSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALAS 173
S + + + + PE ++ K T +SDV+S GV+L E+ T G +P L++
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--WYQLSN 236
Query: 174 NEGISMV 180
NE I +
Sbjct: 237 NEVIECI 243
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 137
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 135
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++K ++V E + NG+L F HD V++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---- 148
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 149 LVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G++L E+++ G +P
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 25/192 (13%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
M FQ E ++++ ++ N+VK+LG C K L++E++ G L + + S + +
Sbjct: 93 MQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSL 152
Query: 61 K------------------TC---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDD 99
+C L IA + A+ + YL +H D+ + N L+ +
Sbjct: 153 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGE 209
Query: 100 NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAEL 159
N K+ADFG S I S + + PE + + T +SDV+++GV+L E+
Sbjct: 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
Query: 160 LT-GLKPGSGMA 170
+ GL+P GMA
Sbjct: 270 FSYGLQPYYGMA 281
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 82 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 251
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 252 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 301
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 302 VEDLDRI 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E V+S+++H VK+ + + + NG L +I S +TC R
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFY 140
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AE SAL+YLH IIH D+K N+LL+++ ++ DFG++ ++S +++ A
Sbjct: 141 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + SD+++ G ++ +L+ GL P
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 77 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 246
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 247 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 296
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 297 VEDLDRI 303
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F+ E+ ++ + H N+VK G C + L+ E++P G+L D++ ++ +
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIK 116
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L+ ++ ++YL + IH ++ + N+L+++ + K+ DFG + ++ D +
Sbjct: 117 LLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE-YY 172
Query: 123 TTKKIG--TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLK-----PGSGMALASNE 175
K+ G PE + K + SDV+SFGV+L EL T ++ P M + N+
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 232
Query: 176 GIS-MVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVS 234
M+ + L + N+ R DE M + ++C + + +RP+ + ++
Sbjct: 233 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM--------IMTECWNNNVNQRPSFRDLA 284
Query: 235 EELDRLK 241
+D+++
Sbjct: 285 LRVDQIR 291
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 305
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 306 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 355
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 356 VEDLDRI 362
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q +H N++++ G + K +++ E++ NG L + +K + + L
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEF-----SVL 147
Query: 65 RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
++ A+ + YL A+ +H D+ + N+L++ N KV+DFG S ++ D +
Sbjct: 148 QLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 122 MTTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISM 179
TT + PE + K T SDV+SFG+++ E++T G +P
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP-------------- 250
Query: 180 VQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDR 239
+ + N+ + + +N + M+ + L +C RRP + LD+
Sbjct: 251 ----YWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306
Query: 240 L 240
L
Sbjct: 307 L 307
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTL---------------FDHIHD 51
E+ ++ I HKN++ +LGAC + ++ E+ G L F+ H+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 52 KSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSS 111
Q+ + K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 143 PEEQL--SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 112 VLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMAL 171
I + TT + PE + T +SDV+SFGVLL E+ T +
Sbjct: 198 RDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGG 250
Query: 172 ASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMK 231
+ G+ + + F E + + + N +E M + C +RPT K
Sbjct: 251 SPYPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFK 300
Query: 232 QVSEELDRL 240
Q+ E+LDR+
Sbjct: 301 QLVEDLDRI 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N ++ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E R++ Q +H N+V+++G C + + +V E V G + + +++ KT L
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLL 216
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
++ + A+ ++YL S IH D+ + N L+ + K++DFG S + A
Sbjct: 217 QMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG 273
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ PE + G+ + +SDV+SFG+LL E +
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 34/256 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 252
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 253 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 302
Query: 234 SEELDRLKISHENYEH 249
E+LDR+ N E+
Sbjct: 303 VEDLDRIVALTSNQEY 318
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F E++V+ + H NV+K +G + K + E++ GTL I SQ W
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQ 109
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI---SSDNQ 119
+ A + AS + YLHS IIH D+ S N L+ +N VADFG + L+ + +
Sbjct: 110 RVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 120 TAMTTKK---------IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ KK +G + PE + EK DV+SFG++L E++
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 293
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 294 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 343
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 344 VEDLDRI 350
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 237
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 238 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 287
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 288 VEDLDRI 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
EL+++S + H+N+V +LGAC L++ E+ G L + + K+ +L
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 59 ------------NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+ L +++ A + +L AS IH DV + NVLL + + AK+
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
DFG + I +D+ + + PE + T +SDV+S+G+LL E+ + GL P
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
Query: 166 GSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGR 225
G+ + S Y + + +Q+A + + + + C +L
Sbjct: 261 YPGILVNSK---------FYKLVKDG------YQMAQPAFAP--KNIYSIMQACWALEPT 303
Query: 226 RRPTMKQVSEEL 237
RPT +Q+ L
Sbjct: 304 HRPTFQQICSFL 315
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E R++ Q +H N+V+++G C + + +V E V G + + +++ KT L
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLL 216
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSS------VLISSDN 118
++ + A+ ++YL S IH D+ + N L+ + K++DFG S V +S
Sbjct: 217 QMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ K PE + G+ + +SDV+SFG+LL E +
Sbjct: 274 LRQVPVKWTA------PEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 244
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 245 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 294
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 295 VEDLDRI 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 252
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 253 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 302
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 303 VEDLDRI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 252
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 253 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 302
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 303 VEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 245
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 246 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 295
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 296 VEDLDRI 302
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ E+ G L +++ + L
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+ K + A + A ++YL AS IH D+ + NVL+ ++ K+ADFG +
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I + TT + PE + T +SDV+SFGVLL E+ T + +
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSP 241
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
G+ + + F E + + + N +E M + C +RPT KQ+
Sbjct: 242 YPGVPVEELFKLLKEGHRMDKPSN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 291
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 292 VEDLDRI 298
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E ++ ++NH +VK+ A L+ +F+ G LF + S +V+ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 132
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE A ALD+LHS II+ D+K N+LLD+ K+ DFG S + A +
Sbjct: 133 AELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--C 187
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG------MALASNEGISMVQ 181
GT + PE V T+ +D +SFGVL+ E+LTG P G M + + M Q
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
Query: 182 YFLYSIENNSLRQIL 196
+ S E SL ++L
Sbjct: 248 FL--SPEAQSLLRML 260
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E ++ ++NH +VK+ A L+ +F+ G LF + S +V+ +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 133
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE A ALD+LHS II+ D+K N+LLD+ K+ DFG S S +
Sbjct: 134 AELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 188
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG------MALASNEGISMVQ 181
GT + PE V T+ +D +SFGVL+ E+LTG P G M + + M Q
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 248
Query: 182 YFLYSIENNSLRQIL 196
+ S E SL ++L
Sbjct: 249 FL--SPEAQSLLRML 261
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E ++ ++NH +VK+ A L+ +F+ G LF + S +V+ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 132
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE A ALD+LHS II+ D+K N+LLD+ K+ DFG S S +
Sbjct: 133 AELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 187
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG------MALASNEGISMVQ 181
GT + PE V T+ +D +SFGVL+ E+LTG P G M + + M Q
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
Query: 182 YFLYSIENNSLRQIL 196
+ S E SL ++L
Sbjct: 248 FL--SPEAQSLLRML 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++ ++V E++ NG+L F HD +++
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ---- 152
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + + + YL +H D+ + NVL+D N KV+DFG S ++ D A
Sbjct: 153 LVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 123 TTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT + PE + + SDV+SFGV++ E+L G +P
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++++ G ++ ++V E++ NG+L F HD +++
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ---- 152
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + + + YL +H D+ + NVL+D N KV+DFG S ++ D A
Sbjct: 153 LVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 123 TTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT + PE + + SDV+SFGV++ E+L G +P
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ + G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E ++S + H ++++ G + + ++ +++ G LF + + SQ N A
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPN-PVAKFYA 112
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE AL+YLHS II+ D+K N+LLD N K+ DFG + + +T
Sbjct: 113 AEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE V T + D +SFG+L+ E+L G P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 8 ELRVVSQIN-HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR-------- 58
E+ ++ I HKN++ +LGAC + ++ + G L +++ + +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 59 -----NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+K + + A ++YL AS IH D+ + NVL+ +N K+ADFG +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
I++ + TT + PE + T +SDV+SFGVL+ E+ T + +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------LGGSP 259
Query: 174 NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
GI + + F E + + + N +E M + C +RPT KQ+
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPAN--CTNELYM--------MMRDCWHAVPSQRPTFKQL 309
Query: 234 SEELDRL 240
E+LDR+
Sbjct: 310 VEDLDRI 316
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 134
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 135 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEXXSV 190
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 51 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 107
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 108 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H NVV + G K ++V EF+ NG L F HD V++
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ---- 146
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + A+ + YL A +H D+ + N+L++ N KV+DFG S +I D +
Sbjct: 147 LVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY 203
Query: 123 TTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT V PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 109
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 135
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 136 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 191
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 133
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 134 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 189
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 73 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 130
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 131 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 186
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 135
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 136 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 191
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 121
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 122 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 97 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 154
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 155 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 210
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 211 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 75 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 132
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 133 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 188
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 134
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 135 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 190
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + +NH+NVVK G E + L E+ G LFD I + R
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQR 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + + YLH I H D+K N+LLD+ K++DFG + + +N+ + K
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 126 KIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + E DV+S G++L +L G P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 70 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 127
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 128 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 183
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 184 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 96 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 153
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + YL AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 154 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSV 209
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 210 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC--L 64
+E+ ++ ++H N++K+ + K LV EF G LF+ I ++ + C
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-----FDECDAA 149
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDN---YKAKVADFGSSVLISSDNQTA 121
I + S + YLH I+H D+K N+LL++ K+ DFG S S D +
Sbjct: 150 NIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-- 204
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
++GT + PE V+ K EK DV+S GV++ LL G P G
Sbjct: 205 -LRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 123
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 124 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 174
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 121
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 122 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ + V ++LG CL + V LV + +P G L DH+ + SQ L
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDL 121
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA + YL ++H D+ + NVL+ K+ DFG + L+ D
Sbjct: 122 LNW--CMQIA----KGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDID 172
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ E ++ + T +SDV+S+GV + EL+T G KP G+
Sbjct: 173 ETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ + S + H N++++ + K L+ EF P G L+ + + T +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM- 120
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
E A AL Y H +IH D+K N+L+ + K+ADFG SV S + M
Sbjct: 121 --EELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-- 173
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + EK D++ GVL E L G+ P
Sbjct: 174 --GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 121
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 122 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTC 63
+ E+ + S + H N++++ + K L+ EF P G L+ + H + + +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRS 116
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
E A AL Y H +IH D+K N+L+ + K+ADFG SV S + M
Sbjct: 117 ATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC 173
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + EK D++ GVL E L G+ P
Sbjct: 174 ----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ + S + H N++++ + K L+ EF P G L+ + + T +
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
E A AL Y H +IH D+K N+L+ + K+ADFG SV S + M
Sbjct: 122 ---EELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC- 174
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + EK D++ GVL E L G+ P
Sbjct: 175 ---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++ + G + K +++ E++ NG+L F +D V++
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ---- 132
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + S + YL ++ +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 133 LVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 189
Query: 123 TTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 190 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 127 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 120 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 115 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 171
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 124
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 125 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 181
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 127 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 115 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 120 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 121
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 122 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 120
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 121 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 118
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 119 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 122
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 123 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 118
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 119 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 95 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 153
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 154 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 204
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMA 170
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 205 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 258
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 123
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 124 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 174
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L++ + +P G L D++ + SQ L
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL 120
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 121 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 124
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 125 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 181
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E+ + ++H+N++++ G L + + V E P G+L D + L T
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLS 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
R A + A + YL S IH D+ + N+LL K+ DFG L +D+ M
Sbjct: 115 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ F PE + T + SD + FGV L E+ T G +P G+
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 71 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 129
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 130 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 180
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 181 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 125
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 126 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 176
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 177 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 127 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++ + G + K +++ E++ NG+L F +D V++
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ---- 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + S + YL + +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 118 LVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 174
Query: 123 TTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 175 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 122
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 123 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 55 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 113
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 114 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 127 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 120 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 122
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 123 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 58 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 116
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 117 LNW--CVQIA----EGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 167
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 168 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 120 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 120 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 121
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 122 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 122
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 123 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL 119
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 120 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q +H N++ + G + K +++ E++ NG+L F +D V++
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ---- 111
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + S + YL + +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 112 LVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 168
Query: 123 TTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 169 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRN 59
+ F E V+ + H +VK+ TK P+ ++ EF+ G+L D + + S Q L
Sbjct: 55 EAFLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL-- 110
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ +A+ A + ++ IH D+++ N+L+ + K+ADFG + +I +
Sbjct: 111 -PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 166
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMA 170
TA K PE + G T KSDV+SFG+LL E++T G P GM+
Sbjct: 167 TAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDK----SSQVL 57
N+ E V++ +++ +V ++LG CL + V L+ + +P G L D++ + SQ L
Sbjct: 86 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 144
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
NW C++IA ++YL ++H D+ + NVL+ K+ DFG + L+ ++
Sbjct: 145 LNW--CVQIA----KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 195
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
+ + E ++ T +SDV+S+GV + EL+T G KP G+
Sbjct: 196 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F+ E+ SQ++H+N+V ++ E LV E++ TL ++I S + T +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAI 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + H I+H D+K N+L+D N K+ DFG + +S + T T
Sbjct: 115 NFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTN 170
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALAS 173
+GT PE E +D+YS G++L E+L G P +G S
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH-DKSSQVLRNWK 61
Q F E ++ + H +V++ + ++ E++ G+L D + D+ +VL
Sbjct: 53 QAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--P 110
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
+ +A+ A + Y+ IH D+++ NVL+ ++ K+ADFG + +I + TA
Sbjct: 111 KLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 167
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSG 168
K PE + G T KSDV+SFG+LL E++T G P G
Sbjct: 168 REGAKFPIKWTA-PEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPG 214
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 136
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 137 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSV 192
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 194
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 195 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSV 250
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 135
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 136 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSV 191
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 133
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 134 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSV 189
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q +H N++ + G ++K ++V E++ NG+L + Q T +
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF-----TVI 124
Query: 65 RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
++ ++ + YL +H D+ + N+L++ N KV+DFG S ++ D + A
Sbjct: 125 QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 122 MTTKKIGTFVNLD-PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
TT+ + PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 83 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 140
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 141 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSV 196
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 197 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 135
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 136 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSV 191
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E++++ Q++H N++K+ + LV E G LFD I + S+V R
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAAR 136
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S + Y+H + I+H D+K N+LL+ K ++ DFG S + +
Sbjct: 137 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK- 192
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
KIGT + PE V+ G EK DV+S GV+L LL+G P +G
Sbjct: 193 --DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K LV E+ G +FD++ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 118 KFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---- 167
Query: 123 TTKKIGTFVNLDPEY----VITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS--- 173
K+ TF P Y + GK + + DV+S GV+L L++G P G L
Sbjct: 168 ---KLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 223
Query: 174 --NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L + +E+I
Sbjct: 224 RVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
F E ++ +H NV+ +LG CL ++ PL+V ++ +G L + I +++ K
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDL 136
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
+ + A + +L AS +H D+ + N +LD+ + KVADFG + + D +
Sbjct: 137 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDML-DKEFDSV 192
Query: 124 TKKIGTFVNLDP---EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
K G + + E + T K T KSDV+SFGVLL EL+T P
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRN 59
+ F E V+ + H +VK+ TK P+ ++ EF+ G+L D + + S Q L
Sbjct: 228 EAFLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL-- 283
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ +A+ A + ++ IH D+++ N+L+ + K+ADFG + +I +
Sbjct: 284 -PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMA 170
TA K PE + G T KSDV+SFG+LL E++T G P GM+
Sbjct: 340 TAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K LV E+ G +FD++ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 118 KFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---- 167
Query: 123 TTKKIGTFVNLDPEY----VITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS--- 173
K+ TF P Y + GK + + DV+S GV+L L++G P G L
Sbjct: 168 ---KLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 223
Query: 174 --NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L + +E+I
Sbjct: 224 RVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K LV E+ G +FD++ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 118 KFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---- 167
Query: 123 TTKKIGTFVNLDPEY----VITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS--- 173
K+ TF P Y + GK + + DV+S GV+L L++G P G L
Sbjct: 168 ---KLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 223
Query: 174 --NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L + +E+I
Sbjct: 224 RVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 35/251 (13%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD-------HIHDKS 53
+ + F+HE + +++ H NVV +LG + + +++ + +G L + H S
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 114
Query: 54 SQVLRNWKTCL------RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVAD 107
+ R K+ L + A+ A+ ++YL S ++H D+ + NVL+ D K++D
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISD 171
Query: 108 FGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPG 166
G + + + + + + PE ++ GK + SD++S+GV+L E+ + GL+P
Sbjct: 172 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
G SN+ + +E RQ+L D+ V L +C + R
Sbjct: 232 CGY---SNQDV---------VEMIRNRQVL--PCPDDCP----AWVYALMIECWNEFPSR 273
Query: 227 RPTMKQVSEEL 237
RP K + L
Sbjct: 274 RPRFKDIHSRL 284
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIH-DKSSQVLRNWK 61
Q F E ++ + H +V++ + + ++ EF+ G+L D + D+ +VL
Sbjct: 52 QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--P 109
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
+ +A+ A + Y+ IH D+++ NVL+ ++ K+ADFG + +I + TA
Sbjct: 110 KLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 166
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
K PE + G T KS+V+SFG+LL E++T
Sbjct: 167 REGAKF-PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E +++ +NH VVK+ A L+ +F+ G LF + S +V+ +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 136
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE A LD+LHS II+ D+K N+LLD+ K+ DFG S + A +
Sbjct: 137 AELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF--C 191
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG------MALASNEGISMVQ 181
GT + PE V + +D +S+GVL+ E+LTG P G M L + M Q
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251
Query: 182 YFLYSIENNSLRQIL 196
+ S E SL + L
Sbjct: 252 FL--STEAQSLLRAL 264
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 35/251 (13%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD-------HIHDKS 53
+ + F+HE + +++ H NVV +LG + + +++ + +G L + H S
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 54 SQVLRNWKTCL------RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVAD 107
+ R K+ L + A+ A+ ++YL S ++H D+ + NVL+ D K++D
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISD 188
Query: 108 FGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPG 166
G + + + + + + PE ++ GK + SD++S+GV+L E+ + GL+P
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
G SN+ + +E RQ+L D+ V L +C + R
Sbjct: 249 CGY---SNQDV---------VEMIRNRQVL--PCPDDCP----AWVYALMIECWNEFPSR 290
Query: 227 RPTMKQVSEEL 237
RP K + L
Sbjct: 291 RPRFKDIHSRL 301
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW-- 60
Q E+R++ +NH N+VK+ K LV E+ G +FD++ V W
Sbjct: 51 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGWMK 104
Query: 61 -KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
K + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 105 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN- 160
Query: 120 TAMTTKKIGTFVNLDPEY----VITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS 173
K+ TF P Y + GK + + DV+S GV+L L++G P G L
Sbjct: 161 ------KLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
Query: 174 -----NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L + +E+I
Sbjct: 214 LRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 254
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K LV E+ G +FD++ + +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 119 KFR---QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN---- 168
Query: 123 TTKKIGTFVNLDPEY----VITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMAL 171
K+ TF P Y + GK + + DV+S GV+L L++G P G L
Sbjct: 169 ---KLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHD---KSSQVLRNWKT 62
Q E+ V+SQ + V K G+ L+ ++ E++ G+ D + +Q+ T
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----AT 108
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
LR E LDYLHS IH D+K+ NVLL ++ + K+ADFG + + +D Q
Sbjct: 109 ILR---EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKR 161
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGS 167
T +GT + PE + K+D++S G+ EL G P S
Sbjct: 162 NT-FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E++++ Q++H N++K+ + LV E G LFD I + S+V R
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAAR 130
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S + Y+H + I+H D+K N+LL+ K ++ DFG S + +
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK- 186
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
KIGT + PE V+ G EK DV+S GV+L LL+G P +G
Sbjct: 187 --DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
Q E+ V+SQ + V K G+ L+ ++ E++ G+ D + +
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ----IAT 124
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ E LDYLHS IH D+K+ NVLL + K+ADFG + + +D Q T
Sbjct: 125 MLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNT- 179
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGM 169
+GT + PE + K+D++S G+ EL G P S M
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E+ ++ +++H N++K+ ++ +V E G LFD I + + RI
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARI 126
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAMT 123
+ S + Y+H I+H D+K N+LL+ K K+ DFG S Q
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKM 180
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+IGT + PE V+ G EK DV+S GV+L LL+G P G
Sbjct: 181 KDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ +++H N++K+ ++ +V E G LFD I + + RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARII 127
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAMTT 124
+ S + Y+H I+H D+K N+LL+ K K+ DFG S Q
Sbjct: 128 KQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMK 181
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+IGT + PE V+ G EK DV+S GV+L LL+G P G
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q +H NV+ + G ++ +++ EF+ NG+L + Q T +
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-----TVI 135
Query: 65 RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
++ A+ + YL A +H D+ + N+L++ N KV+DFG S + D
Sbjct: 136 QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 122 MTTKKIGTFVNLD---PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
T +G + + PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 193 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ +++H N++K+ ++ +V E G LFD I + + RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARII 127
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAMTT 124
+ S + Y+H I+H D+K N+LL+ K K+ DFG S Q
Sbjct: 128 KQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMK 181
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+IGT + PE V+ G EK DV+S GV+L LL+G P G
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 39/189 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETK-------------VPLLVYEFVPNGTLFDHIHDKSS 54
E+ +++ +NH+ VV+ A LE + + E+ NGTL+D IH ++
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111
Query: 55 QVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
R+ R+ + AL Y+HS IIH D+K N+ +D++ K+ DFG + +
Sbjct: 112 NQQRD--EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 115 ----------------SSDNQTAMTTKKIGTFVNLDPEYVI-TGKLTEKSDVYSFGVLLA 157
SSDN T+ IGT + + E + TG EK D+YS G++
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTS----AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 158 ELLTGLKPG 166
E++ G
Sbjct: 223 EMIYPFSTG 231
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E++++ Q++H N++K+ + LV E G LFD I + S+V R
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAAR 154
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S + Y+H + I+H D+K N+LL+ K ++ DFG S + +
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM-- 209
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
KIGT + PE V+ G EK DV+S GV+L LL+G P +G
Sbjct: 210 -KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E++++ Q++H N++K+ + LV E G LFD I + S+V R
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAAR 153
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S + Y+H + I+H D+K N+LL+ K ++ DFG S + +
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM-- 208
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
KIGT + PE V+ G EK DV+S GV+L LL+G P +G
Sbjct: 209 -KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHD---KSSQVLRNWKT 62
Q E+ V+SQ + V K G+ L+ ++ E++ G+ D + +Q+ T
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----AT 128
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
LR E LDYLHS IH D+K+ NVLL ++ + K+ADFG + + +D Q
Sbjct: 129 ILR---EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKR 181
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGS 167
T +GT + PE + K+D++S G+ EL G P S
Sbjct: 182 NT-FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K LV E+ G +FD++ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 118 KFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---- 167
Query: 123 TTKKIGTFVNLDP---EYVITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS---- 173
K+ F P + GK + + DV+S GV+L L++G P G L
Sbjct: 168 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
Query: 174 -NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L + +E+I
Sbjct: 225 VLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K LV E+ G +FD++ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N+
Sbjct: 118 KFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--- 168
Query: 123 TTKKIGTFVNLDPEYVITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS-----NE 175
+ G+ PE + GK + + DV+S GV+L L++G P G L
Sbjct: 169 LDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 176 GISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L + +E+I
Sbjct: 228 GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 76 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 131
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 132 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 189 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 35/248 (14%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETK------VPLLVYEFVPNGTLFDHIHDKSSQVLR 58
F E + + +H +V K++G L ++ +P+++ F+ +G L H +S++
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASRIGE 129
Query: 59 N-----WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
N +T +R + A ++YL S IH D+ + N +L ++ VADFG S
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALA 172
I S + L E + T SDV++FGV + E++T G P +
Sbjct: 187 IYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA----- 241
Query: 173 SNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQ 232
GI + + Y I N L+Q E +E V L +C S ++RP+
Sbjct: 242 ---GIENAEIYNYLIGGNRLKQ----------PPECMEEVYDLMYQCWSADPKQRPSFTC 288
Query: 233 VSEELDRL 240
+ EL+ +
Sbjct: 289 LRMELENI 296
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 62 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 117
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 118 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 78 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 133
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 134 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 78 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 133
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 134 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K L+ E+ G +FD++ + ++
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S N+ +
Sbjct: 116 KFR---QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS------NEFTV 163
Query: 123 TTKKIGTFVNLDPEY----VITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS--- 173
K+ TF P Y + GK + + DV+S GV+L L++G P G L
Sbjct: 164 GG-KLDTFCG-SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 221
Query: 174 --NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L +E+I
Sbjct: 222 RVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQI 259
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 58 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 113
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 114 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 68 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 123
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 124 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 62 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 117
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 118 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q H N++++ G + +++ EF+ NG L F ++D V++
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ---- 119
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL A +H D+ + N+L++ N KV+DFG S + ++
Sbjct: 120 LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 123 TTKKIGTFVNLD---PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
T +G + + PE + K T SD +S+G+++ E+++ G +P
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
N E+ V+ ++H N++K+ + + LV E G LFD I ++ N
Sbjct: 80 NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI---IHRMKFNEV 136
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDN 118
I + S + YLH I+H D+K N+LL+ K K+ DFG S + +N
Sbjct: 137 DAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--EN 191
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
Q M +++GT + PE V+ K EK DV+S GV+L LL G P G
Sbjct: 192 QKKMK-ERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVP--LLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
++ E+ ++ + H++++K G C + LV E+VP G+L D++ S + +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ---- 135
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L A + + YLH+ IH D+ + NVLLD++ K+ DFG + + ++
Sbjct: 136 LLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + V PE + K SDV+SFGV L ELLT
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW-KTCL 64
Q E+ V+SQ + + + G+ L++ ++ E++ G+ D + K + + T L
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATIL 122
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
R E LDYLHS IH D+K+ NVLL + K+ADFG + + +D Q
Sbjct: 123 R---EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNX 175
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL 184
+GT + PE + K+D++S G+ EL G P S + L
Sbjct: 176 -FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---------VL 225
Query: 185 YSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
+ I NS + E + + CL+ R RPT K++
Sbjct: 226 FLIPKNSPPTL---------EGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 56 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 112 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI-HDKSSQVLRNWKTCLRI 66
E+ ++ Q+NH NV+K + +E +V E G L I H K + L +T +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
+ SAL+++HS ++H D+K NV + K+ D G SS A +
Sbjct: 142 FVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL-- 196
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP--GSGMALAS-NEGISMVQYF 183
+GT + PE + KSD++S G LL E+ P G M L S + I Y
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256
Query: 184 LYSIENNS--LRQILNFQVADESE 205
++ S LRQ++N + + E
Sbjct: 257 PLPSDHYSEELRQLVNMCINPDPE 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQVLRNWKT 62
F E ++ Q H N++++ G + +++ EF+ NG L F ++D V++
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ---- 117
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + AS + YL A +H D+ + N+L++ N KV+DFG S + ++
Sbjct: 118 LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 123 TTKKIGTFVNLD---PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
T +G + + PE + K T SD +S+G+++ E+++ G +P
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTC 63
+ E++ + H +++K+ +V E+V G LFD+I H + ++
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EA 113
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
R+ + SA+DY H ++H D+K NVLLD + AK+ADFG S ++ SD + T
Sbjct: 114 RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRT 169
Query: 124 TKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
+ G+ PE VI+G+L + D++S GV+L LL G P
Sbjct: 170 S--CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ + + ++H N++++ + + L+ E+ P G L+ + + S +T
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTAT 127
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
I E A AL Y H +IH D+K N+LL + K+ADFG SV S + M
Sbjct: 128 -IMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC- 182
Query: 125 KKIGTFVNLDPEYVITGKL-TEKSDVYSFGVLLAELLTGLKP 165
GT L PE +I G++ EK D++ GVL ELL G P
Sbjct: 183 ---GTLDYLPPE-MIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 1 MNQV--FQHELRVVSQINHKNVVKILGACLETK-VPLLVYEFVPNGTLFDHIHDKSSQVL 57
M QV F E ++ +NH NV+ ++G L + +P ++ ++ +G L I +S Q
Sbjct: 63 MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRN 120
Query: 58 RNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISS 116
K + + A ++YL A +H D+ + N +LD+++ KVADFG + ++
Sbjct: 121 PTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177
Query: 117 DNQTAMTTKKIGTFVNLDP-EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ + + V E + T + T KSDV+SFGVLL ELLT P
Sbjct: 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 3 QVFQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+ EL+V+S + NH N+V +LGAC L++ E+ G L + + K + + K
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-K 152
Query: 62 TCLRI----------------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKV 105
T I + + A + +L AS IH D+ + N+LL K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 209
Query: 106 ADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLK 164
DFG + I +D+ + + PE + T +SDV+S+G+ L EL + G
Sbjct: 210 CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 165 PGSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSG 224
P GM + S Y + R +L+ + A +EM +I C
Sbjct: 270 PYPGMPVDSK---------FYKMIKEGFR-MLSPEHA-PAEMYDI------MKTCWDADP 312
Query: 225 RRRPTMKQVSEELDR 239
+RPT KQ+ + +++
Sbjct: 313 LKRPTFKQIVQLIEK 327
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHD---KSSQVLRNWKT 62
Q E+ V+SQ + V K G+ L+ ++ E++ G+ D + +Q+ T
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----AT 108
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
LR E LDYLHS IH D+K+ NVLL ++ + K+ADFG + + +D Q
Sbjct: 109 ILR---EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKR 161
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGS 167
+GT + PE + K+D++S G+ EL G P S
Sbjct: 162 NX-FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHD---KSSQVLRNWKT 62
Q E+ V+SQ + V K G+ L+ ++ E++ G+ D + +Q+ T
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----AT 123
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
LR E LDYLHS IH D+K+ NVLL ++ + K+ADFG + + +D Q
Sbjct: 124 ILR---EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKR 176
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGS 167
+GT + PE + K+D++S G+ EL G P S
Sbjct: 177 NX-FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLE-TKVPL-LVYEFVPNGTLFDHIHD--KSSQVLR 58
Q+ E+ ++ ++ H N+V+ ++ T L +V E+ G L I K Q L
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL- 108
Query: 59 NWKTCLRIAAETASALDYLH--SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS 116
+ + LR+ + AL H S ++H D+K NV LD K+ DFG + +++
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEG 176
D A T +GT + PE + EKSD++S G LL EL + P + + G
Sbjct: 169 DTSFAKTF--VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 177 ISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
I R+I ++ +D E+ EI T + L+L RP+++++ E
Sbjct: 227 ---------KIREGKFRRI-PYRYSD--ELNEIIT------RMLNLKDYHRPSVEEILE 267
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 30/250 (12%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 60 ---WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS 110
+K L + + + A +++L AS IH D+ + N+LL + K+ DFG
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGL 190
Query: 111 SVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMA 170
+ I D + PE + T +SDV+SFGVLL E+ + +
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LG 243
Query: 171 LASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTM 230
+ G+ + + F L++ + D + E +T+ C +RPT
Sbjct: 244 ASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTF 294
Query: 231 KQVSEELDRL 240
++ E L L
Sbjct: 295 SELVEHLGNL 304
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 420 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 475
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 476 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q E+ + + HKN+V+ LG+ E + E VP G+L + K + N +
Sbjct: 63 SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ 122
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA--KVADFGSSVLISSDNQ 119
T + L YLH + I+H D+K NVL+ + Y K++DFG+S ++ N
Sbjct: 123 TIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINP 178
Query: 120 TAMTTKKIGTFVNLDPEYVITGK--LTEKSDVYSFGVLLAELLTGLKP 165
T GT + PE + G + +D++S G + E+ TG P
Sbjct: 179 CTETF--TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E V+ Q+++ +V+++G C E + +LV E G L ++ + ++ +++ K + +
Sbjct: 421 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELV 476
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMTTKK 126
+ + + YL S +H D+ + NVLL + AK++DFG S L + +N T
Sbjct: 477 HQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
PE + K + KSDV+SFGVL+ E + G KP GM
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+Q E+ ++ + H+++VK G C + K LV E+VP G+L D++ + +
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ---- 112
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L A + + YLH+ IH + + NVLLD++ K+ DFG + + ++
Sbjct: 113 LLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + V PE + K SDV+SFGV L ELLT
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 33/253 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 75 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 134
Query: 60 ------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVAD 107
+K L + + + A +++L AS IH D+ + N+LL + K+ D
Sbjct: 135 KTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 108 FGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGS 167
FG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------ 245
Query: 168 GMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRR 227
+ + G+ + + F L++ + D + E +T+ C +R
Sbjct: 246 -LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQR 295
Query: 228 PTMKQVSEELDRL 240
PT ++ E L L
Sbjct: 296 PTFSELVEHLGNL 308
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+Q E+ ++ + H+++VK G C + K LV E+VP G+L D++ + +
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ---- 113
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L A + + YLH+ IH + + NVLLD++ K+ DFG + + ++
Sbjct: 114 LLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + V PE + K SDV+SFGV L ELLT
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 3 QVFQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+ EL+V+S + NH N+V +LGAC L++ E+ G L + + K + + K
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-K 147
Query: 62 TCLRI----------------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKV 105
T I + + A + +L AS IH D+ + N+LL K+
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 204
Query: 106 ADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLK 164
DFG + I +D+ + + PE + T +SDV+S+G+ L EL + G
Sbjct: 205 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 264
Query: 165 PGSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSG 224
P GM + S Y + R +L+ + A +EM +I C
Sbjct: 265 PYPGMPVDSK---------FYKMIKEGFR-MLSPEHA-PAEMYDI------MKTCWDADP 307
Query: 225 RRRPTMKQVSEELDR 239
+RPT KQ+ + +++
Sbjct: 308 LKRPTFKQIVQLIEK 322
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 30/250 (12%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVL-- 57
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 58 ----RNWKTC---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS 110
+++ T + + + A +++L AS IH D+ + N+LL + K+ DFG
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGL 190
Query: 111 SVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMA 170
+ I D + PE + T +SDV+SFGVLL E+ + +
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LG 243
Query: 171 LASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTM 230
+ G+ + + F L++ + D + E +T+ C +RPT
Sbjct: 244 ASPYPGVKIDEEF-----XRRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTF 294
Query: 231 KQVSEELDRL 240
++ E L L
Sbjct: 295 SELVEHLGNL 304
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 32/252 (12%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVL-- 57
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 58 ------RNWKTC---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADF 108
+++ T + + + A +++L AS IH D+ + N+LL + K+ DF
Sbjct: 136 KPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDF 192
Query: 109 GSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
G + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 245
Query: 169 MALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRP 228
+ + G+ + + F L++ + D + E +T+ C +RP
Sbjct: 246 LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRP 296
Query: 229 TMKQVSEELDRL 240
T ++ E L L
Sbjct: 297 TFSELVEHLGNL 308
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
++ E+ ++ + H++++K G C + K LV E+VP G+L D++ S + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ---- 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L A + + YLHS IH ++ + NVLLD++ K+ DFG + + ++
Sbjct: 119 LLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + V PE + K SDV+SFGV L ELLT
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 3 QVFQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+ EL+V+S + NH N+V +LGAC L++ E+ G L + + K + + K
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-K 145
Query: 62 TCLRI----------------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKV 105
T I + + A + +L AS IH D+ + N+LL K+
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 202
Query: 106 ADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLK 164
DFG + I +D+ + + PE + T +SDV+S+G+ L EL + G
Sbjct: 203 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 262
Query: 165 PGSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSG 224
P GM + S Y + R +L+ + A +EM +I C
Sbjct: 263 PYPGMPVDSK---------FYKMIKEGFR-MLSPEHA-PAEMYDI------MKTCWDADP 305
Query: 225 RRRPTMKQVSEELDR 239
+RPT KQ+ + +++
Sbjct: 306 LKRPTFKQIVQLIEK 320
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 3 QVFQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+ EL+V+S + NH N+V +LGAC L++ E+ G L + + K + + K
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-K 152
Query: 62 TCLRI----------------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKV 105
T I + + A + +L AS IH D+ + N+LL K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 209
Query: 106 ADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLK 164
DFG + I +D+ + + PE + T +SDV+S+G+ L EL + G
Sbjct: 210 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 165 PGSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSG 224
P GM + S Y + R +L+ + A +EM +I C
Sbjct: 270 PYPGMPVDSK---------FYKMIKEGFR-MLSPEHA-PAEMYDI------MKTCWDADP 312
Query: 225 RRRPTMKQVSEELDR 239
+RPT KQ+ + +++
Sbjct: 313 LKRPTFKQIVQLIEK 327
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 229
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 230 SNEQVLRFVMEGGLL 244
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 25/175 (14%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW------- 60
E++ ++++ H +V+ A LE + P L+ + + L++W
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 61 -----KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS 115
CL I + A A+++LHS ++H D+K +N+ + KV DFG +
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 116 SDN--QTAMT--------TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
D QT +T T ++GT + + PE + + K D++S G++L ELL
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 124
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 236
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 237 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 285
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 286 RPTFSELVEHLGNL 299
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLVY-EFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 236
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 237 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 285
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 286 RPTFSELVEHLGNL 299
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+ ++F+ E+R+ +NH N+VK+ K LV E+ G +FD++ +
Sbjct: 57 LQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA 115
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S + N
Sbjct: 116 RAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-- 167
Query: 121 AMTTKKIGTFVNLDP---EYVITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMAL 171
K+ F P + GK + + DV+S GV+L L++G P G L
Sbjct: 168 -----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 238
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 239 SNEQVLRFVMEGGLL 253
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 3 QVFQHELRVVSQI-NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+ EL+V+S + NH N+V +LGAC L++ E+ G L + + K + + K
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-K 129
Query: 62 TCLRI----------------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKV 105
T I + + A + +L AS IH D+ + N+LL K+
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 186
Query: 106 ADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLK 164
DFG + I +D+ + + PE + T +SDV+S+G+ L EL + G
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 165 PGSGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSG 224
P GM + S Y + R +L+ + A +EM +I C
Sbjct: 247 PYPGMPVDSK---------FYKMIKEGFR-MLSPEHA-PAEMYDI------MKTCWDADP 289
Query: 225 RRRPTMKQVSEELDR 239
+RPT KQ+ + +++
Sbjct: 290 LKRPTFKQIVQLIEK 304
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H D+ + N ++ ++ K+ DFG + I
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 233
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + + RPT ++
Sbjct: 234 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPKMRPTFLEI 279
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H D+ + N ++ ++ K+ DFG + I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 236
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + + RPT ++
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q E+ + + HKN+V+ LG+ E + E VP G+L + K + N +
Sbjct: 49 SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ 108
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA--KVADFGSSVLISSDNQ 119
T + L YLH + I+H D+K NVL+ + Y K++DFG+S ++ N
Sbjct: 109 TIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINP 164
Query: 120 TAMTTKKIGTFVNLDPEYVITGK--LTEKSDVYSFGVLLAELLTGLKP 165
T GT + PE + G + +D++S G + E+ TG P
Sbjct: 165 CTETF--TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E++++ Q++H N+ K+ + LV E G LFD I + S+V R
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAAR 130
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S + Y H + I+H D+K N+LL+ K ++ DFG S + +
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKK 184
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
KIGT + PE V+ G EK DV+S GV+L LL+G P +G
Sbjct: 185 XKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 245
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 246 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 294
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 295 RPTFSELVEHLGNL 308
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q E+R++ +NH N+VK+ K L+ E+ G +FD++ + ++
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
R + SA+ Y H I+H D+K+ N+LLD + K+ADFG S N+ +
Sbjct: 119 KFR---QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS------NEFTV 166
Query: 123 TTKKIGTFVNLDP---EYVITGKLTE--KSDVYSFGVLLAELLTGLKPGSGMALAS---- 173
K+ F P + GK + + DV+S GV+L L++G P G L
Sbjct: 167 GG-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
Query: 174 -NEGISMVQYFLYSIENNSLRQILNFQVADESEMEEI 209
G + +++ + N L++ L +E+I
Sbjct: 226 VLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQI 262
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLVY-EFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 236
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 237 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 285
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 286 RPTFSELVEHLGNL 299
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLE-TKVPL-LVYEFVPNGTLFDHIHD--KSSQVLR 58
Q+ E+ ++ ++ H N+V+ ++ T L +V E+ G L I K Q L
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL- 108
Query: 59 NWKTCLRIAAETASALDYLH--SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS 116
+ + LR+ + AL H S ++H D+K NV LD K+ DFG + +++
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEG 176
D T+ +GT + PE + EKSD++S G LL EL + P + + G
Sbjct: 169 D--TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 177 ISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
I R+I ++ +D E+ EI T + L+L RP+++++ E
Sbjct: 227 ---------KIREGKFRRI-PYRYSD--ELNEIIT------RMLNLKDYHRPSVEEILE 267
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 245
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 246 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 294
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 295 RPTFSELVEHLGNL 308
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLVY-EFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 236
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 237 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 285
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 286 RPTFSELVEHLGNL 299
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTC 63
+ E++ + H +++K+ +V E+V G LFD+I H + ++
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EA 113
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
R+ + SA+DY H ++H D+K NVLLD + AK+ADFG S ++S
Sbjct: 114 RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FL 167
Query: 124 TKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
G+ PE VI+G+L + D++S GV+L LL G P
Sbjct: 168 RDSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ Q +H NV+ + G ++ +++ EF+ NG+L + Q T +
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-----TVI 109
Query: 65 RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
++ A+ + YL A +H + + N+L++ N KV+DFG S + D
Sbjct: 110 QLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 122 MTTKKIGTFVNLD---PEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
T +G + + PE + K T SDV+S+G+++ E+++ G +P
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 111 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 170
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 171 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 227
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 282
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 283 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 331
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 332 RPTFSELVEHLGNL 345
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 136 KEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 192
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 193 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 247
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 248 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 296
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 297 RPTFSELVEHLGNL 310
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 2 NQVFQHELRVVSQINHK-NVVKILGACLETKVPLLV-YEFVPNGTLFDHIHDKSSQVLRN 59
++ EL+++ I H NVV +LGAC + PL+V EF G L ++ K ++ +
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 60 -------WKTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVA 106
+K L + + + A +++L AS IH D+ + N+LL + K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPG 166
DFG + I D + PE + T +SDV+SFGVLL E+ +
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 245
Query: 167 SGMALASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRR 226
+ + G+ + + F L++ + D + E +T+ C +
Sbjct: 246 --LGASPYPGVKIDEEFC-----RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQ 294
Query: 227 RPTMKQVSEELDRL 240
RPT ++ E L L
Sbjct: 295 RPTFSELVEHLGNL 308
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
++ E+ ++ + H++++K G C + K LV E+VP G+L D++ S + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ---- 118
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L A + + YLH+ IH ++ + NVLLD++ K+ DFG + + ++
Sbjct: 119 LLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + V PE + K SDV+SFGV L ELLT
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 3 QVFQHELRVVS--QINHKNVVKILGA---CLETKVPL-LVYEFVPNGTLFDHIHDKSSQV 56
Q +Q+E V S + H+N+++ +GA V L L+ F G+L D + K++ V
Sbjct: 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVV 118
Query: 57 LRNWKTCLRIAAETASALDYLH-------SSASPPIIHGDVKSTNVLLDDNYKAKVADFG 109
+W IA A L YLH P I H D+KS NVLL +N A +ADFG
Sbjct: 119 --SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 110 SSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS------DVYSFGVLLAELLTGL 163
++ + T ++GT + PE V+ G + + D+Y+ G++L EL +
Sbjct: 177 LALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235
Query: 164 KPGSG 168
G
Sbjct: 236 TAADG 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E++ + H +++K+ +V E+V G LFD+I K+ ++ + K R
Sbjct: 64 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-KNGRL--DEKESRR 120
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + S +DY H ++H D+K NVLLD + AK+ADFG S ++S
Sbjct: 121 LFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRX 174
Query: 126 KIGTFVNLDPEYVITGKLT--EKSDVYSFGVLLAELLTGLKP 165
G+ PE VI+G+L + D++S GV+L LL G P
Sbjct: 175 SCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 14/168 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKS---SQVLRNWK 61
E++ +SQ +H N+V + + LV + + G++ D HI K S VL
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE-S 121
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
T I E L+YLH + IH DVK+ N+LL ++ ++ADFG S+ L + + T
Sbjct: 122 TIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 121 AMTTKK--IGTFVNLDPEYVITGKLTE-KSDVYSFGVLLAELLTGLKP 165
+K +GT + PE + + + K+D++SFG+ EL TG P
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 39/189 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETK-------------VPLLVYEFVPNGTLFDHIHDKSS 54
E+ +++ +NH+ VV+ A LE + + E+ N TL+D IH ++
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL 111
Query: 55 QVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
R+ R+ + AL Y+HS IIH D+K N+ +D++ K+ DFG + +
Sbjct: 112 NQQRD--EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 115 ----------------SSDNQTAMTTKKIGTFVNLDPEYVI-TGKLTEKSDVYSFGVLLA 157
SSDN T+ IGT + + E + TG EK D+YS G++
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTS----AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 158 ELLTGLKPG 166
E++ G
Sbjct: 223 EMIYPFSTG 231
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H D+ + N ++ ++ K+ DFG + I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 236
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + RPT ++
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLE-TKVPL-LVYEFVPNGTLFDHIHD--KSSQVLR 58
Q+ E+ ++ ++ H N+V+ ++ T L +V E+ G L I K Q L
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL- 108
Query: 59 NWKTCLRIAAETASALDYLH--SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS 116
+ + LR+ + AL H S ++H D+K NV LD K+ DFG + +++
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEG 176
D A + +GT + PE + EKSD++S G LL EL + P + + G
Sbjct: 169 DEDFA--KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 177 ISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
I R+I ++ +D E+ EI T + L+L RP+++++ E
Sbjct: 227 ---------KIREGKFRRI-PYRYSD--ELNEIIT------RMLNLKDYHRPSVEEILE 267
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 231
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 232 SNEQVLRFVMEGGLL 246
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 66 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 125
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H D+ + N ++ ++ K+ DFG + I
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 182
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 235
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + + RPT ++
Sbjct: 236 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQ-VLRN 59
M Q+ + E+ V+ ++H N++KI + +V E G L + I ++ +
Sbjct: 64 MEQI-EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALS 122
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDD---NYKAKVADFGSSVLISS 116
+ + +AL Y HS ++H D+K N+L D + K+ DFG + L S
Sbjct: 123 EGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Query: 117 DNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEG 176
D + T GT + + PE V +T K D++S GV++ LLTG P +G +L +
Sbjct: 180 DEHS---TNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ 235
Query: 177 ISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
+ + Y++E L Q D L + L+ RRP+ QV
Sbjct: 236 KATYKEPNYAVECRPLTP----QAVD------------LLKQMLTKDPERRPSAAQV 276
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 14/168 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKS---SQVLRNWK 61
E++ +SQ +H N+V + + LV + + G++ D HI K S VL
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE-S 116
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
T I E L+YLH + IH DVK+ N+LL ++ ++ADFG S+ L + + T
Sbjct: 117 TIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
Query: 121 AMTTKK--IGTFVNLDPEYVITGKLTE-KSDVYSFGVLLAELLTGLKP 165
+K +GT + PE + + + K+D++SFG+ EL TG P
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H D+ + N ++ ++ K+ DFG + I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 236
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + + RPT ++
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 238
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 239 SNEQVLRFVMEGGLL 253
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 8 ELRVVSQINHKNVVKI------LGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
E++++ ++NH NVV L +PLL E+ G L +++ +
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
+ ++ +SAL YLH + IIH D+K N++L + K+ D G + + +
Sbjct: 122 PIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---D 175
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q + T+ +GT L PE + K T D +SFG L E +TG +P
Sbjct: 176 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 235
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 236 SNEQVLRFVMEGGLL 250
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 8 ELRVVSQINHKNVVKI------LGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
E++++ ++NH NVV L +PLL E+ G L +++ +
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
+ ++ +SAL YLH + IIH D+K N++L + K+ D G + + +
Sbjct: 123 PIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---D 176
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q + T+ +GT L PE + K T D +SFG L E +TG +P
Sbjct: 177 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 237
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 238 SNEQVLRFVMEGGLL 252
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 244
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 245 SNEQVLRFVMEGGLL 259
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 237
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 238 SNEQVLRFVMEGGLL 252
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEG 176
+ K + + PE + G T SDV+SFGV+L E+ T +P G+ SNE
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL---SNEQ 270
Query: 177 I 177
+
Sbjct: 271 V 271
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL-- 64
+E+ V+ + + N+V L + L +V E++ G+L D + + TC+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDE 115
Query: 65 -RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IAA E AL++LHS+ +IH D+KS N+LL + K+ DFG I+ +
Sbjct: 116 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T +GT + PE V K D++S G++ E++ G P
Sbjct: 173 RSTM--VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ + N
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 234
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 235 SNEQVLRFVMEGGLL 249
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ + N
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N ++ +++ K+ DFG + I
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 244
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 245 SNEQVLRFVMEGGLL 259
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E+ ++ H NVV++ + L + ++ EF+ G L D + SQV N + +
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATV 146
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AL YLH+ +IH D+KS ++LL + + K++DFG IS D
Sbjct: 147 CEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXL 201
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL-- 64
+E+ V+ + + N+V L + L +V E++ G+L D + + TC+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDE 115
Query: 65 -RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IAA E AL++LHS+ +IH D+KS N+LL + K+ DFG I+ +
Sbjct: 116 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ ++ +GT + PE V K D++S G++ E++ G P
Sbjct: 171 SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E+ V+ Q++H N++K+ + + LV E G LFD I K S+V
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-----DAAV 125
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S YLH I+H D+K N+LL+ + K+ DFG S +
Sbjct: 126 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 179
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+++GT + PE V+ K EK DV+S GV+L LL G P G
Sbjct: 180 MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 29 ETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHG 88
+TK + EF GTL I + + L + L + + +DY+HS +IH
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKL-DKVLALELFEQITKGVDYIHSKK---LIHR 160
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSD 148
D+K +N+ L D + K+ DFG L++S T+ GT + PE + + ++ D
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFG---LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVD 217
Query: 149 VYSFGVLLAELL 160
+Y+ G++LAELL
Sbjct: 218 LYALGLILAELL 229
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
M+ + E+ + + H +++K+ ++V E+ G LFD+I +K
Sbjct: 52 MHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEG 110
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ R + A++Y H I+H D+K N+LLDDN K+ADFG S +++ N
Sbjct: 111 R---RFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162
Query: 121 AMTTKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
G+ PE VI GKL + DV+S G++L +L G P
Sbjct: 163 -FLKTSCGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVP--LLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
FQ E++++ ++ +VK G P LV E++P+G L D + +++ +
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL--DASR 112
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L +++ ++YL S +H D+ + N+L++ K+ADFG + L+ D +
Sbjct: 113 LLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV 169
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + + PE + + +SDV+SFGV+L EL T
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 21/165 (12%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL-- 64
+E+ V+ + + N+V L + L +V E++ G+L D + + TC+
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDE 116
Query: 65 -RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IAA E AL++LHS+ +IH D+KS N+LL + K+ DFG I+ +
Sbjct: 117 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 171
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ + +GT + PE V K D++S G++ E++ G P
Sbjct: 172 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +++ N VV++ A + K +V E++P G L + + + V W
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFY 179
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT- 123
AE ALD +HS +IH DVK N+LLD + K+ADFG+ + + ++T M
Sbjct: 180 --TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM---DETGMVH 231
Query: 124 -TKKIGTFVNLDPEYVIT----GKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + G + D +S GV L E+L G P
Sbjct: 232 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H D+ + N ++ ++ K+ DFG + I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 236
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + + RPT ++
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 21/165 (12%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL-- 64
+E+ V+ + + N+V L + L +V E++ G+L D + + TC+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDE 115
Query: 65 -RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IAA E AL++LHS+ +IH D+KS N+LL + K+ DFG I+ +
Sbjct: 116 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ + +GT + PE V K D++S G++ E++ G P
Sbjct: 171 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +++ N VV++ A + + +V E++P G L + + + V W
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY 178
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
AE ALD +HS IH DVK N+LLD + K+ADFG+ + ++ + T
Sbjct: 179 --TAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 125 KKIGTFVNLDPEYVIT----GKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + G + D +S GV L E+L G P
Sbjct: 234 -AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ + N +VV++LG + + L++ E + G L ++ ++ N
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+++A E A + YL+++ +H D+ + N + +++ K+ DFG + I
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SDV+SFGV+L E+ T +A +G+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGL 231
Query: 178 SMVQYFLYSIENNSL 192
S Q + +E L
Sbjct: 232 SNEQVLRFVMEGGLL 246
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +++ N VV++ A + + +V E++P G L + + + V W
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY 178
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
AE ALD +HS IH DVK N+LLD + K+ADFG+ + ++ + T
Sbjct: 179 --TAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 125 KKIGTFVNLDPEYVIT----GKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + G + D +S GV L E+L G P
Sbjct: 234 -AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E +++ N VV++ A + + +V E++P G L + + + V W
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY 173
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
AE ALD +HS IH DVK N+LLD + K+ADFG+ + ++ + T
Sbjct: 174 --TAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 125 KKIGTFVNLDPEYVIT----GKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + G + D +S GV L E+L G P
Sbjct: 229 -AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKTCLR 65
E+ V+ Q++H N++K+ + + LV E G LFD I K S+V
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-----DAAV 108
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADFGSSVLISSDNQTAM 122
I + S YLH I+H D+K N+LL+ + K+ DFG S +
Sbjct: 109 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK- 164
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+++GT + PE V+ K EK DV+S GV+L LL G P G
Sbjct: 165 --ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSL--DLASLI 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 115 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 172 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 226
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 227 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 115 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 172 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 226
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 227 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 115 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 172 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 226
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 227 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 55 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 111
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 112 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 169 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 223
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 224 ------NGERLPMPPNCPP--------TLYSLMTKCWAYDPSRRPRFTELKAQL 263
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 142
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 143 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 200 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 254
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 255 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 294
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 117
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 118 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 175 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 229
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 230 ------NGERLPMPPNCPP--------TLYSLMTKCWAYDPSRRPRFTELKAQL 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 116
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 117 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 174 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 228
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 229 ------NGERLPMPPNCPP--------TLYSLMTKCWAYDPSRRPRFTELKAQL 268
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ + + H+++ ++ +V E+ P G LFD+I + + R
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-- 115
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ SA+ Y+HS H D+K N+L D+ +K K+ DFG + + T
Sbjct: 116 -QIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CC 170
Query: 128 GTFVNLDPEYVITGK--LTEKSDVYSFGVLLAELLTGLKP 165
G+ PE +I GK L ++DV+S G+LL L+ G P
Sbjct: 171 GSLAYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSL--DLASLI 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 120 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 177 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 231
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 232 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 271
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRN 59
++ FQ E + + +++H +VK G C + +V E++ NG L +++ H K +
Sbjct: 48 DEFFQ-EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--- 103
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
L + + + +L S IH D+ + N L+D + KV+DFG + + D
Sbjct: 104 -SQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ K + PE K + KSDV++FG+L+ E+ +
Sbjct: 160 VSSVGTKFPVKWSA-PEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL-- 64
+E+ V+ + + N+V L + L +V E++ G+L D + + TC+
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDE 116
Query: 65 -RIAA---ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+IAA E AL++LHS+ +IH ++KS N+LL + K+ DFG I+ +
Sbjct: 117 GQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T +GT + PE V K D++S G++ E++ G P
Sbjct: 174 RSTM--VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLE-----------------TKVPLLVYEFVPNGT 44
N+ + E++ +++++H N+V G C + TK + EF GT
Sbjct: 48 NEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106
Query: 45 LFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAK 104
L I + + L + L + + +DY+HS +I+ D+K +N+ L D + K
Sbjct: 107 LEQWIEKRRGEKL-DKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVK 162
Query: 105 VADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ DFG L++S + GT + PE + + ++ D+Y+ G++LAELL
Sbjct: 163 IGDFG---LVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSL--DLASLI 494
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ N K+ DFG S + +
Sbjct: 495 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 552 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 606
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 607 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKT-CLR 65
E RV++ + L +C +T L V E+V G L HI QV R + +
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVF 125
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AAE A L +L S II+ D+K NV+LD K+ADFG + + +TTK
Sbjct: 126 YAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTK 179
Query: 126 KI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE + + D ++FGVLL E+L G P G
Sbjct: 180 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKT-CLR 65
E RV++ + L +C +T L V E+V G L HI QV R + +
Sbjct: 391 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVF 446
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AAE A L +L S II+ D+K NV+LD K+ADFG + + +TTK
Sbjct: 447 YAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTK 500
Query: 126 KI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE + + D ++FGVLL E+L G P G
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H ++ + N ++ ++ K+ DFG + I
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 184
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 237
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + RPT ++
Sbjct: 238 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D KVADFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 16 NHKNVVKILGACLETKVP------LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAE 69
+H+N+ GA ++ P LV EF G++ D I + L+ + I E
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWIAYICRE 137
Query: 70 TASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGT 129
L +LH +IH D+K NVLL +N + K+ DFG S + D IGT
Sbjct: 138 ILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT 192
Query: 130 FVNLDPEYVITGKLTE-----KSDVYSFGVLLAELLTGLKP 165
+ PE + + + KSD++S G+ E+ G P
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 53/262 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL---------------------- 45
E V+ Q+NH +V+K+ GAC + LL+ E+ G+L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 46 ---FDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK 102
DH +++ + + A + + + YL A ++H D+ + N+L+ + K
Sbjct: 136 SSSLDHPDERALTM----GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRK 188
Query: 103 AKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG 162
K++DFG S + ++ ++ + E + T +SDV+SFGVLL E++T
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT- 247
Query: 163 LKPGSGMALASN--EGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCL 220
L N GI + F N L+ + D E + L +C
Sbjct: 248 --------LGGNPYPGIPPERLF------NLLKTGHRMERPDNCS----EEMYRLMLQCW 289
Query: 221 SLSGRRRPTMKQVSEELDRLKI 242
+RP +S++L+++ +
Sbjct: 290 KQEPDKRPVFADISKDLEKMMV 311
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E +++ Q+++ +V+++G C + + +LV E G L + K ++ + +
Sbjct: 59 REAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAEL 115
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
+ + + YL +H D+ + NVLL + + AK++DFG S + +D+ + T +
Sbjct: 116 LHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARS 171
Query: 127 IGTFV--NLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
G + PE + K + +SDV+S+GV + E L+ G KP M
Sbjct: 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRN----- 59
F +E V+ +VV++LG + + L+V E + +G L ++ + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 60 --WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
+ +++AAE A + YL++ +H ++ + N ++ ++ K+ DFG + I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGI 177
+ K + + PE + G T SD++SFGV+L E+ + +A +G+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGL 236
Query: 178 SMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
S Q + ++ L Q N E V L C + RPT ++
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCP----------ERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 53/262 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL---------------------- 45
E V+ Q+NH +V+K+ GAC + LL+ E+ G+L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 46 ---FDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK 102
DH +++ + + A + + + YL A ++H D+ + N+L+ + K
Sbjct: 136 SSSLDHPDERALTM----GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRK 188
Query: 103 AKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG 162
K++DFG S + ++ ++ + E + T +SDV+SFGVLL E++T
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT- 247
Query: 163 LKPGSGMALASN--EGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCL 220
L N GI + F N L+ + D E + L +C
Sbjct: 248 --------LGGNPYPGIPPERLF------NLLKTGHRMERPDNCS----EEMYRLMLQCW 289
Query: 221 SLSGRRRPTMKQVSEELDRLKI 242
+RP +S++L+++ +
Sbjct: 290 KQEPDKRPVFADISKDLEKMMV 311
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S++NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 193
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S++NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 207
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 53/262 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL---------------------- 45
E V+ Q+NH +V+K+ GAC + LL+ E+ G+L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 46 ---FDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK 102
DH +++ + + A + + + YL A ++H D+ + N+L+ + K
Sbjct: 136 SSSLDHPDERALTM----GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRK 188
Query: 103 AKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG 162
K++DFG S + ++ ++ + E + T +SDV+SFGVLL E++T
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT- 247
Query: 163 LKPGSGMALASN--EGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCL 220
L N GI + F N L+ + D E + L +C
Sbjct: 248 --------LGGNPYPGIPPERLF------NLLKTGHRMERPDNCS----EEMYRLMLQCW 289
Query: 221 SLSGRRRPTMKQVSEELDRLKI 242
+RP +S++L+++ +
Sbjct: 290 KQEPDKRPVFADISKDLEKMMV 311
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q + E R+ ++ H N+V++ + E LV++ V G LF+ I + +
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDNQ 119
C++ E+ + Y HS+ I+H ++K N+LL K K+ADFG ++ + N
Sbjct: 133 CIQQILES---IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---ND 183
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE + ++ D+++ GV+L LL G P
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 167 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 219
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 220 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 192
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 2 NQVFQHELRVVSQ--INHKNVVKIL-----GACLETKVPLLVYEFVPNGTLFDHIHDKSS 54
Q +Q E + S + H+N+++ + G+ LE ++ L+ F G+L D++
Sbjct: 51 KQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVEL-WLITAFHDKGSLTDYLKGN-- 107
Query: 55 QVLRNWKTCLRIAAETASALDYLHSSAS--------PPIIHGDVKSTNVLLDDNYKAKVA 106
+ W +A + L YLH P I H D KS NVLL + A +A
Sbjct: 108 --IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLA 165
Query: 107 DFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS------DVYSFGVLLAELL 160
DFG +V T ++GT + PE V+ G + + D+Y+ G++L EL+
Sbjct: 166 DFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELV 224
Query: 161 TGLKPGSG 168
+ K G
Sbjct: 225 SRCKAADG 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MAQD 193
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 192
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 157 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 209
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 210 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 132 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 184
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 185 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E RV+S + + +TK L V E++ G L HI L
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL---SRATFY 124
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ--TAMTT 124
AAE L +LHS I++ D+K N+LLD + K+ADFG + +N A T
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG----MCKENMLGDAKTN 177
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ GT + PE ++ K D +SFGVLL E+L G P G
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 158 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 210
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 211 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 193
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 3 QVFQ-HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+VF+ EL + + +V + GA E + E + G+L + + Q
Sbjct: 129 EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE---QGCLPED 185
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSD--N 118
L + L+YLHS I+HGDVK+ NVLL D A + DFG +V + D
Sbjct: 186 RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 119 QTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
++ +T I GT ++ PE V+ K DV+S ++ +L G P
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 207
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 181 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 233
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRN 59
+ F E V+ + H +VK+ TK P+ ++ EF+ G+L D + + S Q L
Sbjct: 222 EAFLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL-- 277
Query: 60 WKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ +A+ A + ++ IH D+++ N+L+ + K+ADFG +
Sbjct: 278 -PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLA-------- 325
Query: 120 TAMTTKKIGTFVNLD---PEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMA 170
++G + PE + G T KSDV+SFG+LL E++T G P GM+
Sbjct: 326 ------RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 374
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 207
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC- 63
F E ++S+ NH+N+V+ +G L++ ++ E + G L + + + +
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 64 ---LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSD 117
L +A + A YL + IH D+ + N LL AK+ DFG ++ D
Sbjct: 147 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARD 199
Query: 118 NQTAMTTKKIGTFV----NLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
A +K G + + PE + G T K+D +SFGVLL E+ +
Sbjct: 200 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWK--TCL 64
E RV++ ++ + L +C +T L V E+V G L HI Q + +K +
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-----QQVGKFKEPQAV 123
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
AAE + L +LH II+ D+K NV+LD K+ADFG + +TT
Sbjct: 124 FYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKEHMMDGVTT 177
Query: 125 KKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
++ GT + PE + + D +++GVLL E+L G P G
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q + E R+ ++ H N+V++ + E LV++ V G LF+ I + +
Sbjct: 50 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDNQ 119
C++ E+ + Y HS+ I+H ++K N+LL K K+ADFG ++ + N
Sbjct: 110 CIQQILES---IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---ND 160
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE + ++ D+++ GV+L LL G P
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
H LR V+ H +++ ++ + + LV++ + G LFD++ +K + + ++ +R
Sbjct: 151 HILRQVA--GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
E A+ +LH++ I+H D+K N+LLDDN + +++DFG S + + +
Sbjct: 209 LLE---AVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LREL 259
Query: 127 IGTFVNLDPEYVITGKLTE-------KSDVYSFGVLLAELLTGLKP 165
GT L PE ++ + E + D+++ GV+L LL G P
Sbjct: 260 CGTPGYLAPE-ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E++P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D KVADFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ V++ + H N+V+ + E +V ++ G LF I+ + VL L
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG-VLFQEDQILD 129
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ AL ++H I+H D+KS N+ L + ++ DFG + +++S + A
Sbjct: 130 WFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC- 185
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT 161
IGT L PE KSD+++ G +L EL T
Sbjct: 186 -IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q + E R+ ++ H N+V++ + E LV++ V G LF+ I + +
Sbjct: 50 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDNQ 119
C++ E+ + Y HS+ I+H ++K N+LL K K+ADFG ++ + N
Sbjct: 110 CIQQILES---IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---ND 160
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE + ++ D+++ GV+L LL G P
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q + E R+ + H N+V++ + E LV++ V G LF+ I + +
Sbjct: 47 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 106
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
C++ E+ +++ H + I+H D+K N+LL K K+ADFG ++ + D
Sbjct: 107 HCIQQILES---VNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q GT L PE + + D+++ GV+L LL G P
Sbjct: 161 QAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E++P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D KVADFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
Q + E R+ ++ H N+V++ + E LV++ V G LF+ I + +
Sbjct: 49 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 108
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDNQ 119
C++ E+ + Y HS+ I+H ++K N+LL K K+ADFG ++ + N
Sbjct: 109 CIQQILES---IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---ND 159
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT L PE + ++ D+++ GV+L LL G P
Sbjct: 160 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q + E R+ + H N+V++ + E LV++ V G LF+ I + +
Sbjct: 47 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 106
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
C++ E+ +++ H + I+H D+K N+LL K K+ADFG ++ + D
Sbjct: 107 HCIQQILES---VNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q GT L PE + + D+++ GV+L LL G P
Sbjct: 161 QAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E RV+S + + +TK L V E++ G L HI L
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL---SRATFY 123
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ--TAMTT 124
AAE L +LHS I++ D+K N+LLD + K+ADFG + +N A T
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG----MCKENMLGDAKTN 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE ++ K D +SFGVLL E+L G P G
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V+ +I H+N+V + T LV + V G LFD I ++ + K
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG---VYTEKDASL 110
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ + SA+ YLH + I+H D+K N+L ++N K + DFG +S Q +
Sbjct: 111 VIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFG----LSKMEQNGI 163
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT + PE + ++ D +S GV+ LL G P
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 9 LRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAA 68
LR VS H N++++ LV++ + G LFD++ +K + + + +R
Sbjct: 77 LRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
E AL L+ I+H D+K N+LLDD+ K+ DFG S + + + G
Sbjct: 135 EVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCG 185
Query: 129 TFVNLDPEYVITGKLTE-------KSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQ 181
T L PE +I + + + D++S GV++ LL G P
Sbjct: 186 TPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP---------------- 228
Query: 182 YFLYSIENNSLRQIL--NFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQ 232
F + + LR I+ N+Q + +TV L S+ L + ++R T ++
Sbjct: 229 -FWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD--HIHDKSSQVLRNWKTCLR 65
E+R + ++ H N ++ G L LV E+ G+ D +H K Q +
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVE------- 155
Query: 66 IAAETASALD---YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
IAA T AL YLHS +IH DVK+ N+LL + K+ DFGS+ +++ N
Sbjct: 156 IAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-- 210
Query: 123 TTKKIGTFVNLDPEYVIT---GKLTEKSDVYSFGVLLAEL 159
+GT + PE ++ G+ K DV+S G+ EL
Sbjct: 211 ----VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 38/233 (16%)
Query: 9 LRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAA 68
LR VS H N++++ LV++ + G LFD++ +K + + + +R
Sbjct: 77 LRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
E AL L+ I+H D+K N+LLDD+ K+ DFG S + + G
Sbjct: 135 EVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---G 185
Query: 129 TFVNLDPEYVITGKLTE-------KSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQ 181
T L PE +I + + + D++S GV++ LL G P
Sbjct: 186 TPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP---------------- 228
Query: 182 YFLYSIENNSLRQIL--NFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQ 232
F + + LR I+ N+Q + +TV L S+ L + ++R T ++
Sbjct: 229 -FWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ F+ E+ Q H+NVV +GAC+ ++ TL+ + D ++++ +
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNK 131
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG----SSVLISSDN 118
+IA E + YLH+ I+H D+KS NV DN K + DFG S VL +
Sbjct: 132 TRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRR 187
Query: 119 QTAMTTKKIGTFVNLDPEYVIT-------GKL--TEKSDVYSFGVLLAEL 159
+ + + G +L PE + KL ++ SDV++ G + EL
Sbjct: 188 EDKLRIQN-GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 39/189 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETK-------------VPLLVYEFVPNGTLFDHIHDKSS 54
E+ +++ +NH+ VV+ A LE + + E+ N TL+D IH ++
Sbjct: 52 EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL 111
Query: 55 QVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
R+ R+ + AL Y+HS IIH ++K N+ +D++ K+ DFG + +
Sbjct: 112 NQQRD--EYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 115 ----------------SSDNQTAMTTKKIGTFVNLDPEYVI-TGKLTEKSDVYSFGVLLA 157
SSDN T+ IGT + E + TG EK D YS G++
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSA----IGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF 222
Query: 158 ELLTGLKPG 166
E + G
Sbjct: 223 EXIYPFSTG 231
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 9 LRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAA 68
LR VS H N++++ LV++ + G LFD++ +K + + + +R
Sbjct: 64 LRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
E AL L+ I+H D+K N+LLDD+ K+ DFG S + + + G
Sbjct: 122 EVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCG 172
Query: 129 TFVNLDPEYVITGKLTE-------KSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQ 181
T L PE +I + + + D++S GV++ LL G P
Sbjct: 173 TPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP---------------- 215
Query: 182 YFLYSIENNSLRQIL--NFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQ 232
F + + LR I+ N+Q + +TV L S+ L + ++R T ++
Sbjct: 216 -FWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 267
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSL--DLASLI 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ K+ DFG S + +
Sbjct: 115 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 172 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 226
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 227 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q + E R+ + H N+V++ + E LV++ V G LF+ I + +
Sbjct: 47 HQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 106
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
C++ + A+ + H ++H D+K N+LL K K+ADFG ++ + D
Sbjct: 107 HCIQ---QILEAVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q GT L PE + + D+++ GV+L LL G P
Sbjct: 161 QAWFGFA--GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 3 QVFQ-HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+VF+ EL + + +V + GA E + E + G+L + + Q
Sbjct: 110 EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE---QGCLPED 166
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSD--N 118
L + L+YLHS I+HGDVK+ NVLL D A + DFG +V + D
Sbjct: 167 RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 119 QTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ +T I GT ++ PE V+ K DV+S ++ +L G P
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 23/159 (14%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEF-VPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E+R + ++ H N ++ G L LV E+ + + + +H K Q + I
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE-------I 117
Query: 67 AAETASALD---YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
AA T AL YLHS +IH DVK+ N+LL + K+ DFGS+ +++ N
Sbjct: 118 AAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF--- 171
Query: 124 TKKIGTFVNLDPEYVIT---GKLTEKSDVYSFGVLLAEL 159
+GT + PE ++ G+ K DV+S G+ EL
Sbjct: 172 ---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 3 QVFQ-HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+VF+ EL + ++ +V + GA E + E + G+L I K L
Sbjct: 94 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPE-D 150
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSD--N 118
L + L+YLH+ I+HGDVK+ NVLL D +A + DFG ++ + D
Sbjct: 151 RALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 119 QTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
++ +T I GT ++ PE V+ K D++S ++ +L G P
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---- 199
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 200 -CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 26/234 (11%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E + Q +H ++VK++G E V ++ E G L + + + + + +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSL--DLASLI 494
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A + ++AL YL S +H D+ + NVL+ K+ DFG S + +
Sbjct: 495 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGMALASNEGISMVQYF 183
K+ + PE + + T SDV+ FGV + E+L G+KP G + +N+ I ++
Sbjct: 552 GKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIE-- 606
Query: 184 LYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEEL 237
N R + T+ L +KC + RRP ++ +L
Sbjct: 607 ------NGERLPMPPNCP--------PTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 3 QVFQ-HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+VF+ EL + ++ +V + GA E + E + G+L I K L
Sbjct: 108 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPE-D 164
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSD--N 118
L + L+YLH+ I+HGDVK+ NVLL D +A + DFG ++ + D
Sbjct: 165 RALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 221
Query: 119 QTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
++ +T I GT ++ PE V+ K D++S ++ +L G P
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 3 QVFQ-HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+VF+ EL + ++ +V + GA E + E + G+L I K L
Sbjct: 110 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPE-D 166
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVLISSD--N 118
L + L+YLH+ I+HGDVK+ NVLL D +A + DFG ++ + D
Sbjct: 167 RALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 223
Query: 119 QTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
++ +T I GT ++ PE V+ K D++S ++ +L G P
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKV-----PLLVYEFVPNGTLFDHIHDKSSQVLRN 59
F E + +H NV+++LG C+E P+++ F+ G L H + S++
Sbjct: 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL--HTYLLYSRLETG 140
Query: 60 WK-----TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
K T L+ + A ++YL + +H D+ + N +L D+ VADFG S I
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKI 197
Query: 115 SSDNQ------TAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGS 167
S + M K I D Y T KSDV++FGV + E+ T G+ P
Sbjct: 198 YSGDYYRQGRIAKMPVKWIAIESLADRVY------TSKSDVWAFGVTMWEIATRGMTPYP 251
Query: 168 GM 169
G+
Sbjct: 252 GV 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R+ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 91 NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D KVADFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
FQ E++++ ++ +VK G + LV E++P+G L D + +++ +
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASR 115
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L +++ ++YL S +H D+ + N+L++ K+ADFG + L+ D +
Sbjct: 116 LLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + + PE + + +SDV+SFGV+L EL T
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARF 138
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 139 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 190
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q + E R+ + H N+V++ + E LV++ V G LF+ I + +
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
C+ E+ ++++H I+H D+K N+LL K K+ADFG ++ + +
Sbjct: 134 HCIHQILES---VNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q GT L PE + + D+++ GV+L LL G P
Sbjct: 188 QAWFGFA--GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 131
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 132 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---- 184
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 185 -CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ +H NVV + + L +V EF+ G L D + + N + +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIATVC 147
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AL YLH+ +IH D+KS ++LL + + K++DFG +S + +
Sbjct: 148 LSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS--KEVPKRKXLV 202
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE + + D++S G+++ E++ G P
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+E +++ ++N + VV + A ETK L LV + G L HI+ +
Sbjct: 233 NEKQILEKVNSRFVVSLAYA-YETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF- 290
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AAE L+ LH I++ D+K N+LLDD+ +++D G +V + + QT
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQT--IKG 344
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
++GT + PE V + T D ++ G LL E++ G P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
FQ E++++ ++ +VK G + LV E++P+G L D + +++ +
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASR 128
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L +++ ++YL S +H D+ + N+L++ K+ADFG + L+ D +
Sbjct: 129 LLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + + PE + + +SDV+SFGV+L EL T
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+E +++ ++N + VV + A ETK L LV + G L HI+ +
Sbjct: 233 NEKQILEKVNSRFVVSLAYA-YETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF- 290
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AAE L+ LH I++ D+K N+LLDD+ +++D G +V + + QT
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQT--IKG 344
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
++GT + PE V + T D ++ G LL E++ G P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 5 FQHELRVVSQINHKNVVKILGACLET--KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
FQ E++++ ++ +VK G + LV E++P+G L D + +++ +
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASR 116
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
L +++ ++YL S +H D+ + N+L++ K+ADFG + L+ D +
Sbjct: 117 LLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
Query: 123 TTKKIGTFVNL-DPEYVITGKLTEKSDVYSFGVLLAELLT 161
+ + + PE + + +SDV+SFGV+L EL T
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 35/248 (14%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+ ++ E++++ Q+ H+N+V +L C + K LV+EFV + T+ D + + + ++
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV-DHTILDDLELFPNGL--DY 123
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ + + + + + HS IIH D+K N+L+ + K+ DFG + +++ +
Sbjct: 124 QVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 179
Query: 121 AMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGSGMALASNEGI 177
+ ++ T PE ++ K + DV++ G L+ E+ G L PG + I
Sbjct: 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPG-------DSDI 231
Query: 178 SMVQYFLYSIENNSLR--QILN-------FQVADESEMEEI--------ETVAGLASKCL 220
+ + + + N R ++ N ++ + E E + E V LA KCL
Sbjct: 232 DQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCL 291
Query: 221 SLSGRRRP 228
+ +RP
Sbjct: 292 HIDPDKRP 299
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 166
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 167 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 218
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E +++ Q+++ +V+++G C + + +LV E G L + K ++ + +
Sbjct: 386 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELL 442
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ + + YL +H ++ + NVLL + + AK++DFG S + +D+ + T +
Sbjct: 443 HQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSA 498
Query: 128 GTFV--NLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKPGSGM 169
G + PE + K + +SDV+S+GV + E L+ G KP M
Sbjct: 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 138
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 139 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 190
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+VP G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 257
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 258 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSL 311
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 243
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 244 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSL 297
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFXEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V+ +I H N+V + L+ + V G LFD I +K R+ R
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASR 120
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYKAKVADFGSSVLISSDNQTAM 122
+ + A+ YLH I+H D+K N+L LD++ K ++DFG S + D + +
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVL 175
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+T GT + PE + ++ D +S GV+ LL G P
Sbjct: 176 STA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 118
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSL 172
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V+ +I H N+V + L+ + V G LFD I +K R+ R
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASR 120
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYKAKVADFGSSVLISSDNQTAM 122
+ + A+ YLH I+H D+K N+L LD++ K ++DFG S + ++ ++
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT + PE + ++ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 117
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 118 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSL 171
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 126
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAMTT 124
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 127 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR 180
Query: 125 KKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 118
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSL 172
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ +++ +H +VK+LGA ++ EF P G + D I + + L + + +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQV-VC 123
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK- 126
+ AL++LHS IIH D+K+ NVL+ ++ADFG +S+ N + +
Sbjct: 124 RQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFG----VSAKNLKTLQKRDS 176
Query: 127 -IGTFVNLDPEYVITGKLTE-----KSDVYSFGVLLAEL 159
IGT + PE V+ + + K+D++S G+ L E+
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ ++NH ++KI + + +V E + G LFD + ++ L+ TC
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 118
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH + IIH D+K NVLL +++ K+ DFG S ++ +T++
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSL 172
Query: 123 TTKKIGTFVNLDPEYVI---TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
GT L PE ++ T D +S GV+L L+G P S
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V+ +I H N+V + L+ + V G LFD I +K R+ R
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASR 120
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYKAKVADFGSSVLISSDNQTAM 122
+ + A+ YLH I+H D+K N+L LD++ K ++DFG S + ++ ++
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT + PE + ++ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V+ +I H N+V + L+ + V G LFD I +K R+ R
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD---ASR 120
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVL---LDDNYKAKVADFGSSVLISSDNQTAM 122
+ + A+ YLH I+H D+K N+L LD++ K ++DFG S + ++ ++
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT + PE + ++ D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ +++ +H +VK+LGA ++ EF P G + D I + + L + + +
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQV-VC 115
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK- 126
+ AL++LHS IIH D+K+ NVL+ ++ADFG +S+ N + +
Sbjct: 116 RQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFG----VSAKNLKTLQKRDS 168
Query: 127 -IGTFVNLDPEYVITGKLTE-----KSDVYSFGVLLAEL 159
IGT + PE V+ + + K+D++S G+ L E+
Sbjct: 169 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLR 58
M + E+ + + H +++K+ ++V E+ N LFD+I DK S+
Sbjct: 57 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE--- 112
Query: 59 NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDN 118
+ R + SA++Y H I+H D+K N+LLD++ K+ADFG S +++ N
Sbjct: 113 --QEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 167
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
G+ PE VI+GKL + DV+S GV+L +L P
Sbjct: 168 ---FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKSSQVLRNWKTC 63
+E+ ++ H+NVV++ + L +V EF+ G L D H Q+ C
Sbjct: 197 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVC 253
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L + AL LH+ +IH D+KS ++LL + + K++DFG +S +
Sbjct: 254 LAVL----QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRR 304
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 305 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 45 LFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAK 104
L D ++ + S R CL I + A A+++LHS ++H D+K +N+ + K
Sbjct: 148 LKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVK 204
Query: 105 VADFGSSVLISSDN--QTAMTTK--------KIGTFVNLDPEYVITGKLTEKSDVYSFGV 154
V DFG + D QT +T ++GT + + PE + + K D++S G+
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL 264
Query: 155 LLAELL 160
+L ELL
Sbjct: 265 ILFELL 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLR 58
M + E+ + + H +++K+ ++V E+ N LFD+I DK S+
Sbjct: 56 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE--- 111
Query: 59 NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDN 118
+ R + SA++Y H I+H D+K N+LLD++ K+ADFG S +++ N
Sbjct: 112 --QEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
G+ PE VI+GKL + DV+S GV+L +L P
Sbjct: 167 ---FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLR 58
M + E+ + + H +++K+ ++V E+ N LFD+I DK S+
Sbjct: 47 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE--- 102
Query: 59 NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDN 118
+ R + SA++Y H I+H D+K N+LLD++ K+ADFG S +++ N
Sbjct: 103 --QEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 157
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
+ G+ PE VI+GKL + DV+S GV+L +L P
Sbjct: 158 FLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKSSQVLRNWKTC 63
+E+ ++ H+NVV++ + L +V EF+ G L D H Q+ C
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVC 176
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L + AL LH+ +IH D+KS ++LL + + K++DFG +S +
Sbjct: 177 LAVL----QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRR 227
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 228 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLR 58
M + E+ + + H +++K+ ++V E+ N LFD+I DK S+
Sbjct: 51 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE--- 106
Query: 59 NWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDN 118
+ R + SA++Y H I+H D+K N+LLD++ K+ADFG S +++ N
Sbjct: 107 --QEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 161
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKL--TEKSDVYSFGVLLAELLTGLKP 165
G+ PE VI+GKL + DV+S GV+L +L P
Sbjct: 162 ---FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H N++ L E K + L+ E V G LFD + +K S L
Sbjct: 56 EREVNILREIRHPNII-TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDD----NYKAKVADFGSSVLISSDNQT 120
+ + + YLHS I H D+K N++L D N + K+ DFG + I + N+
Sbjct: 115 K---QILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 169 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKSSQVLRNWKTC 63
+E+ ++ H+NVV++ + L +V EF+ G L D H Q+ C
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVC 133
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L + AL LH+ +IH D+KS ++LL + + K++DFG +S +
Sbjct: 134 LAVL----QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRR 184
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 185 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKSSQVLRNWKTC 63
+E+ ++ H+NVV++ + L +V EF+ G L D H Q+ C
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVC 131
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L + AL LH+ +IH D+KS ++LL + + K++DFG +S +
Sbjct: 132 LAVL----QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRR 182
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 183 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 28/156 (17%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSAS------PPIIH 87
LLV E+ PNG+L ++ +S +W + R+A L YLH+ P I H
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH 143
Query: 88 GDVKSTNVLLDDNYKAKVADFGSSV------LISSDNQTAMTTKKIGTFVNLDPEYVITG 141
D+ S NVL+ ++ ++DFG S+ L+ + ++GT + PE V+ G
Sbjct: 144 RDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEG 202
Query: 142 KLT--------EKSDVYSFGVLLAELL---TGLKPG 166
+ ++ D+Y+ G++ E+ T L PG
Sbjct: 203 AVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V+ +I H+N+V + LV + V G LFD I +K ++ T +R
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAM 122
+ A+ YLH I+H D+K N+L D+ K ++DFG S + + + +
Sbjct: 128 ---QVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDV 178
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+ GT + PE + ++ D +S GV+ LL G P
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ V++Q++H N++++ A +LV E+V G LFD I D+S L T L
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTIL- 191
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL--DDNYKAKVADFGSSVLISSDNQTAMT 123
+ + ++H I+H D+K N+L D + K+ DFG + + +
Sbjct: 192 FMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT L PE V ++ +D++S GV+ LL+GL P G
Sbjct: 249 ---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E +V+ I + L +T+ L L+ +++ G LF H+ SQ R + ++I
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQI 163
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
E AL++LH II+ D+K N+LLD N + DFG S +D +T
Sbjct: 164 YVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-ETERAYD 219
Query: 126 KIGTFVNLDPEYVITGKLTEKS--DVYSFGVLLAELLTGLKP 165
GT + P+ V G D +S GVL+ ELLTG P
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H N++ L E K + L+ E V G LFD + +K S L
Sbjct: 77 EREVNILREIRHPNII-TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 135
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDD----NYKAKVADFGSSVLISSDNQT 120
+ + + YLHS I H D+K N++L D N + K+ DFG + I + N+
Sbjct: 136 K---QILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 190 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H N++ L E K + L+ E V G LFD + +K S L
Sbjct: 63 EREVNILREIRHPNII-TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 121
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDD----NYKAKVADFGSSVLISSDNQT 120
+ + + YLHS I H D+K N++L D N + K+ DFG + I + N+
Sbjct: 122 K---QILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 176 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKSSQVLRNWKTC 63
+E+ ++ H+NVV++ + L +V EF+ G L D H Q+ C
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVC 122
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L + AL LH+ +IH D+KS ++LL + + K++DFG +S +
Sbjct: 123 LAVL----QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRR 173
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 174 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFD---HIHDKSSQVLRNWKTC 63
+E+ ++ H+NVV++ + L +V EF+ G L D H Q+ C
Sbjct: 70 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVC 126
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMT 123
L + AL LH+ +IH D+KS ++LL + + K++DFG +S +
Sbjct: 127 LAVL----QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRR 177
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
+GT + PE + + D++S G+++ E++ G P
Sbjct: 178 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
M Q Q+E+++ Q+ H +++++ ++ LV E NG + ++ ++ N
Sbjct: 54 MVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN- 112
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+ + + YLHS I+H D+ +N+LL N K+ADFG + + ++
Sbjct: 113 -EARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK 168
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T GT + PE +SDV+S G + LL G P
Sbjct: 169 HYTL--CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q + E R+ + H N+V++ + E L+++ V G LF+ I + +
Sbjct: 65 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 124
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
C++ + A+ + H ++H D+K N+LL K K+ADFG ++ + +
Sbjct: 125 HCIQ---QILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q GT L PE + + D+++ GV+L LL G P
Sbjct: 179 QAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N + K+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFXEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLET----KVPLLVYEFVPNGTLFDHIHD---KSS 54
Q F+ E + + H N+V+ + T K +LV E +GTL ++
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI 128
Query: 55 QVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL-DDNYKAKVADFGSSVL 113
+VLR+W C +I L +LH+ +PPIIH D+K N+ + K+ D G + L
Sbjct: 129 KVLRSW--CRQIL----KGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGS 167
+ A+ IGT PE K E DVY+FG E T P S
Sbjct: 182 KRASFAKAV----IGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYS 230
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E ++ ++ H +V ++ A L+ E++ G LF + + + C +A
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLA 128
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
E + AL +LH II+ D+K N++L+ K+ DFG + S + +T
Sbjct: 129 -EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFG--LCKESIHDGTVTHXFC 182
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE ++ D +S G L+ ++LTG P +G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F++EL++++ I ++ + G ++YE++ N ++ D+ VL TC
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF--DEYFFVLDKNYTCF 147
Query: 65 -------RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
I ++ Y+H+ + I H DVK +N+L+D N + K++DFG S
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGES------ 199
Query: 118 NQTAMTTKKI----GTFVNLDPEYVI--TGKLTEKSDVYSFGVLLAELLTGLKPGS 167
M KKI GT+ + PE+ + K D++S G+ L + + P S
Sbjct: 200 --EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E ++ ++ H +V ++ A L+ E++ G LF + + + C +A
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLA 128
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
E + AL +LH II+ D+K N++L+ K+ DFG + S + +T
Sbjct: 129 -EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFG--LCKESIHDGTVTHTFC 182
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE ++ D +S G L+ ++LTG P +G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 25/164 (15%)
Query: 15 INHKNVVKILGACLE-----TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAE 69
+ H+N++ + A ++ T++ L+ ++ NG+L+D++ KS+ + + K+ L++A
Sbjct: 88 MRHENILGFIAADIKGTGSWTQL-YLITDYHENGSLYDYL--KSTTL--DAKSMLKLAYS 142
Query: 70 TASALDYLHS-----SASPPIIHGDVKSTNVLLDDNYKAKVADFGSSV-LISSDNQTAMT 123
+ S L +LH+ P I H D+KS N+L+ N +AD G +V IS N+ +
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 124 TK-KIGTFVNLDPEYVITGKLTEK-------SDVYSFGVLLAEL 159
++GT + PE V+ L +D+YSFG++L E+
Sbjct: 203 PNTRVGTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N + K+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 34/246 (13%)
Query: 16 NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALD 75
H N++ + + K LV E + G L D I + R L +T ++
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT---VE 135
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYK----AKVADFGSSVLISSDNQTAMTTKKIGTFV 131
YLHS ++H D+K +N+L D ++ DFG + + ++N MT FV
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 132 NLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP-GSGMALASNEGISMVQYFLYSIENN 190
PE + E D++S G+LL +L G P +G + E ++ + +++
Sbjct: 193 A--PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGG 250
Query: 191 SLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV--------SEELDRLKI 242
+ + ET L SK L + +R T KQV ++L + ++
Sbjct: 251 NWNTV-------------SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
Query: 243 SHENYE 248
SH++ +
Sbjct: 298 SHQDLQ 303
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ Q + +VVK G+ + +V E+ G++ D I ++ + + I
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATIL 131
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
T L+YLH IH D+K+ N+LL+ AK+ADFG + ++ + A I
Sbjct: 132 QSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVI 186
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE + +D++S G+ E+ G P
Sbjct: 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N + K+ + + +V E+ P G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D KV DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E R++S + + L C +T L V EFV G L HI KS + +
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRF--DEARARFY 129
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AAE SAL +LH II+ D+K NVLLD K+ADFG + T T
Sbjct: 130 AAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF-- 184
Query: 127 IGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE + D ++ GVLL E+L G P
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVP----LLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
EL + H+N++ + + + ++ L+ + G+L+D++ + + +C
Sbjct: 52 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SC 107
Query: 64 LRIAAETASALDYLH-----SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS-SD 117
LRI AS L +LH + P I H D+KS N+L+ N + +AD G +V+ S S
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 118 NQTAM-TTKKIGTFVNLDPEY------VITGKLTEKSDVYSFGVLLAEL 159
NQ + ++GT + PE V ++ D+++FG++L E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 34/246 (13%)
Query: 16 NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALD 75
H N++ + + K LV E + G L D I + R L +T ++
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT---VE 135
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYK----AKVADFGSSVLISSDNQTAMTTKKIGTFV 131
YLHS ++H D+K +N+L D ++ DFG + + ++N MT FV
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 132 NLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP-GSGMALASNEGISMVQYFLYSIENN 190
PE + E D++S G+LL +L G P +G + E ++ + +++
Sbjct: 193 A--PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGG 250
Query: 191 SLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV--------SEELDRLKI 242
+ + ET L SK L + +R T KQV ++L + ++
Sbjct: 251 NWNTV-------------SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
Query: 243 SHENYE 248
SH++ +
Sbjct: 298 SHQDLQ 303
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVP----LLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
EL + H+N++ + + + ++ L+ + G+L+D++ + + +C
Sbjct: 52 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SC 107
Query: 64 LRIAAETASALDYLH-----SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS-SD 117
LRI AS L +LH + P I H D+KS N+L+ N + +AD G +V+ S S
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 118 NQTAM-TTKKIGTFVNLDPEY------VITGKLTEKSDVYSFGVLLAEL 159
NQ + ++GT + PE V ++ D+++FG++L E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 132
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D+ +V DFG + + T
Sbjct: 133 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWX 184
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVP----LLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
EL + H+N++ + + + ++ L+ + G+L+D++ + + +C
Sbjct: 81 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SC 136
Query: 64 LRIAAETASALDYLH-----SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS-SD 117
LRI AS L +LH + P I H D+KS N+L+ N + +AD G +V+ S S
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 118 NQTAM-TTKKIGTFVNLDPEY------VITGKLTEKSDVYSFGVLLAEL 159
NQ + ++GT + PE V ++ D+++FG++L E+
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARF 166
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 167 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 218
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARF 140
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 141 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 192
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 166
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 167 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL---- 219
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 220 -CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F+ E+ ++ ++H N++++ + LV E G LF+ + K +V R
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRE-SDAA 126
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTA 121
RI + SA+ Y H + H D+K N L + K+ DFG L +
Sbjct: 127 RIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFG---LAARFKPGK 180
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
M K+GT + P+ V+ G + D +S GV++ LL G P S
Sbjct: 181 MMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPFSA 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 52 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 107
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
+++ L YL I+H DVK +N+L++ + K+ DFG +S
Sbjct: 108 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDE 161
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMAL 171
M + +GT + PE + + +SD++S G+ L E+ G P MA+
Sbjct: 162 MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAI 211
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFAEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+++D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +I+ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F+ E+ ++ ++H N++++ + LV E G LF+ + K +V R
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRE-SDAA 109
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTA 121
RI + SA+ Y H + H D+K N L + K+ DFG L +
Sbjct: 110 RIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFG---LAARFKPGK 163
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
M K+GT + P+ V+ G + D +S GV++ LL G P S
Sbjct: 164 MMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPFSA 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 146
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 147 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 198
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 68 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 123
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+++ L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 124 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 177
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP-GSG 168
M +GT + PE + + +SD++S G+ L E+ G P GSG
Sbjct: 178 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 17 HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKS--SQVLRNWKTCLRIAAETASAL 74
H N+VK+ + LV E + G LF+ I K S+ ++ I + SA+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAV 119
Query: 75 DYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFV 131
++H ++H D+K N+L +DN + K+ DFG + L DNQ T T
Sbjct: 120 SHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLH 174
Query: 132 NLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
PE + E D++S GV+L +L+G P
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 35 LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTN 94
V E+ G LF H+ S + + + AE SALDYLHS + +++ D+K N
Sbjct: 228 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLEN 282
Query: 95 VLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGV 154
++LD + K+ DFG D T T GT L PE + D + GV
Sbjct: 283 LMLDKDGHIKITDFGLCKEGIKDGATMKTF--CGTPEYLAPEVLEDNDYGRAVDWWGLGV 340
Query: 155 LLAELLTGLKP 165
++ E++ G P
Sbjct: 341 VMYEMMCGRLP 351
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
+Q + E R+ + H N+V++ + E L+++ V G LF+ I + +
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 113
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA---KVADFGSSVLISSDN 118
C++ + A+ + H ++H ++K N+LL K K+ADFG ++ + +
Sbjct: 114 HCIQ---QILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
Q GT L PE + + D+++ GV+L LL G P
Sbjct: 168 QAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
++E+ +++Q++H ++ + A + +L+ EF+ G LFD I + ++ +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE--AEVIN 153
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA--KVADFGSSVLISSDNQTAMT 123
+ L ++H + I+H D+K N++ + + K+ DFG + ++ D +T
Sbjct: 154 YMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 124 TKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
T T PE V + +D+++ GVL LL+GL P +G
Sbjct: 211 T---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ +++ +H N+VK+L A ++ EF G + D + + + L + + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VC 141
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK- 126
+T AL+YLH + IIH D+K+ N+L + K+ADFG +S+ N + +
Sbjct: 142 KQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRTIQRRDS 194
Query: 127 -IGTFVNLDPEYVITGKLTE-----KSDVYSFGVLLAEL 159
IGT + PE V+ + K+DV+S G+ L E+
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 35 LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTN 94
V E+ G LF H+ S + + + AE SALDYLHS + +++ D+K N
Sbjct: 225 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLEN 279
Query: 95 VLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGV 154
++LD + K+ DFG D T T GT L PE + D + GV
Sbjct: 280 LMLDKDGHIKITDFGLCKEGIKDGATMKTF--CGTPEYLAPEVLEDNDYGRAVDWWGLGV 337
Query: 155 LLAELLTGLKP 165
++ E++ G P
Sbjct: 338 VMYEMMCGRLP 348
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ +++ +H N+VK+L A ++ EF G + D + + + L + + +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VC 114
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK- 126
+T AL+YLH + IIH D+K+ N+L + K+ADFG +S+ N ++
Sbjct: 115 KQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRTXIQRRD 167
Query: 127 --IGTFVNLDPEYVITGKLTE-----KSDVYSFGVLLAEL 159
IGT + PE V+ + K+DV+S G+ L E+
Sbjct: 168 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ +++ +H N+VK+L A ++ EF G + D + + + L + + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VC 141
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK- 126
+T AL+YLH + IIH D+K+ N+L + K+ADFG +S+ N + +
Sbjct: 142 KQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRXIQRRDS 194
Query: 127 -IGTFVNLDPEYVITGKLTE-----KSDVYSFGVLLAEL 159
IGT + PE V+ + K+DV+S G+ L E+
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ +++ +H N+VK+L A ++ EF G + D + + + L + + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VC 141
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK- 126
+T AL+YLH + IIH D+K+ N+L + K+ADFG +S+ N + +
Sbjct: 142 KQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRXIQRRDX 194
Query: 127 -IGTFVNLDPEYVITGKLTE-----KSDVYSFGVLLAEL 159
IGT + PE V+ + K+DV+S G+ L E+
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 9/182 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL-FDHIHDKSSQVLRNWKTC 63
+ E + + H ++V++L + +V+EF+ L F+ + + + +
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQT 120
+ AL Y H + IIH DVK NVLL +++ K+ DFG ++ +
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV 189
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
A ++GT + PE V + DV+ GV+L LL+G P G EGI
Sbjct: 190 A--GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKG 247
Query: 181 QY 182
+Y
Sbjct: 248 KY 249
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 61 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 120 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 174 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKV--PLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F E + +H NV+ +LGAC P L+ ++P G+L++ +H+ ++ V+
Sbjct: 54 FNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ-SQ 112
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
++ A + A + +LH + P I + S +V++D++ A+++ + V S + M
Sbjct: 113 AVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS--MADVKFSFQSPGRM 169
Query: 123 TTKKIGTFVNLDPEYVITGKLTEK--------SDVYSFGVLLAELLT 161
P +V L +K +D++SF VLL EL+T
Sbjct: 170 YA----------PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 93 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 148
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 205
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 245
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 200
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 94 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 149
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 206
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 246
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 61 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 120 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 174 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N T+ T + PE + K +
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSL---TEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 92 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 147
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 204
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 244
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE +++ + D ++ GVL+ ++ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 87 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 142
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 199
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 239
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 198
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 114
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T T
Sbjct: 115 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--C 169
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 187
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 244
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 138 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 193
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 250
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 290
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLH-----SSASPPIIHG 88
LV ++ +G+LFD+++ + V + +++A TAS L +LH + P I H
Sbjct: 83 WLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 138
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQT--AMTTKKIGTFVNLDPEYV---ITGKL 143
D+KS N+L+ N +AD G +V S T ++GT + PE + I K
Sbjct: 139 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 198
Query: 144 TE---KSDVYSFGVLLAEL 159
E ++D+Y+ G++ E+
Sbjct: 199 FESFKRADIYAMGLVFWEI 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T T
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--C 166
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLH-----SSASPPIIHG 88
LV ++ +G+LFD+++ + V + +++A TAS L +LH + P I H
Sbjct: 77 WLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQT--AMTTKKIGTFVNLDPEYV---ITGKL 143
D+KS N+L+ N +AD G +V S T ++GT + PE + I K
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 144 TE---KSDVYSFGVLLAEL 159
E ++D+Y+ G++ E+
Sbjct: 193 FESFKRADIYAMGLVFWEI 211
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 200
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 31 KVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDV 90
K L+V E + G LF I D+ Q + I A+ YLHS I H DV
Sbjct: 102 KCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDV 157
Query: 91 KSTNVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS 147
K N+L N K+ DFG + +S N ++TT + + PE + K +
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSC 214
Query: 148 DVYSFGVLLAELLTGLKPG-SGMALASNEG----ISMVQY 182
D++S GV++ LL G P S LA + G I M QY
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 254
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T T
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--C 166
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLH-----SSASPPIIHG 88
LV ++ +G+LFD+++ + V + +++A TAS L +LH + P I H
Sbjct: 80 WLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 135
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQT--AMTTKKIGTFVNLDPEYV---ITGKL 143
D+KS N+L+ N +AD G +V S T ++GT + PE + I K
Sbjct: 136 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 195
Query: 144 TE---KSDVYSFGVLLAEL 159
E ++D+Y+ G++ E+
Sbjct: 196 FESFKRADIYAMGLVFWEI 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
E A+D +H +H D+K NVLLD N ++ADFG S L +D+ T ++ +
Sbjct: 182 GEMVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAV 237
Query: 128 GTFVNLDPEYVIT-----GKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISM 179
GT + PE + GK + D +S GV + E+L G P +L G M
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLH-----SSASPPIIHG 88
LV ++ +G+LFD+++ + V + +++A TAS L +LH + P I H
Sbjct: 78 WLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 133
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQT--AMTTKKIGTFVNLDPEYV---ITGKL 143
D+KS N+L+ N +AD G +V S T ++GT + PE + I K
Sbjct: 134 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 193
Query: 144 TE---KSDVYSFGVLLAEL 159
E ++D+Y+ G++ E+
Sbjct: 194 FESFKRADIYAMGLVFWEI 212
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 35 LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTN 94
V E+ G LF H+ S + + + AE SALDYLHS + +++ D+K N
Sbjct: 85 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLEN 139
Query: 95 VLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFG 153
++LD + K+ DFG L + T K GT L PE + D + G
Sbjct: 140 LMLDKDGHIKITDFG---LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 196
Query: 154 VLLAELLTGLKP 165
V++ E++ G P
Sbjct: 197 VVMYEMMCGRLP 208
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
E A+D +H +H D+K NVLLD N ++ADFG S L +D+ T ++ +
Sbjct: 198 GEMVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAV 253
Query: 128 GTFVNLDPEYVIT-----GKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISM 179
GT + PE + GK + D +S GV + E+L G P +L G M
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 35 LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTN 94
V E+ G LF H+ S + + + AE SALDYLHS + +++ D+K N
Sbjct: 87 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLEN 141
Query: 95 VLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFG 153
++LD + K+ DFG L + T K GT L PE + D + G
Sbjct: 142 LMLDKDGHIKITDFG---LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 198
Query: 154 VLLAELLTGLKP 165
V++ E++ G P
Sbjct: 199 VVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 35 LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTN 94
V E+ G LF H+ S + + + AE SALDYLHS + +++ D+K N
Sbjct: 86 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLEN 140
Query: 95 VLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFG 153
++LD + K+ DFG L + T K GT L PE + D + G
Sbjct: 141 LMLDKDGHIKITDFG---LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 154 VLLAELLTGLKP 165
V++ E++ G P
Sbjct: 198 VVMYEMMCGRLP 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++
Sbjct: 76 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQIL 133
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+ IA L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 134 GKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVP-LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
+ E+ ++ +I H NV+ L E K +L+ E V G LFD + +K S L
Sbjct: 62 EREVSILKEIQHPNVI-TLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNY---KAKVADFGSSVLISSDNQT 120
+ + + + YLHS I H D+K N+ LLD N + K+ DFG + I N+
Sbjct: 121 K---QILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 175 KNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFV------------PNGTLFDHIH 50
LR + H NVV+++ C E KV LV+E V P G + I
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 51 DKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS 110
D Q LR LD+LH++ I+H D+K N+L+ K+ADFG
Sbjct: 124 DLMRQFLR--------------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166
Query: 111 SVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ + S Q A+T + T PE ++ D++S G + AE+
Sbjct: 167 ARIYS--YQMALTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLH-----SSASPPIIHG 88
LV ++ +G+LFD+++ + V + +++A TAS L +LH + P I H
Sbjct: 103 WLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 158
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQT--AMTTKKIGTFVNLDPEYV---ITGKL 143
D+KS N+L+ N +AD G +V S T ++GT + PE + I K
Sbjct: 159 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 218
Query: 144 TE---KSDVYSFGVLLAEL 159
E ++D+Y+ G++ E+
Sbjct: 219 FESFKRADIYAMGLVFWEI 237
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 49 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 104
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+++ L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 49 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 104
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+++ L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 15 INHKNVVKILGACLETKVP----LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAET 70
+ H N++ + + + ++ L+ + +G+L+D + ++ + LR+A
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP----HLALRLAVSA 114
Query: 71 ASALDYLH-----SSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS--SDNQTAMT 123
A L +LH + P I H D KS NVL+ N + +AD G +V+ S SD
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN 174
Query: 124 TKKIGTFVNLDPEYVITGKLTE------KSDVYSFGVLLAEL 159
++GT + PE + T+ +D+++FG++L E+
Sbjct: 175 NPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++
Sbjct: 111 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQIL 168
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+ IA L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 169 GKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 220
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 221 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 49 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 104
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+++ L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE A+D +H +H D+K N+L+D N ++ADFGS + + D T ++ +
Sbjct: 182 AEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAV 237
Query: 128 GTFVNLDPEYVIT-----GKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
GT + PE + G+ + D +S GV + E+L G P +L G
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG------ 291
Query: 183 FLYSIENNSLRQILNFQVADESE 205
I N+ R QV D SE
Sbjct: 292 ---KIMNHKERFQFPTQVTDVSE 311
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 49 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 104
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+++ L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 45/251 (17%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+R++ Q+ H N+V +L + LV+E+ + L H D+ + + I
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPE-HLVKSIT 108
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+T A+++ H IH DVK N+L+ + K+ DFG + L++ + ++
Sbjct: 109 WQTLQAVNFCHKHNC---IHRDVKPENILITKHSVIKLCDFGFARLLTG--PSDYYDDEV 163
Query: 128 GTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS-------------GMAL 171
T PE ++ + DV++ G + AELL+G L PG G +
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223
Query: 172 ASNEGI-SMVQYFLYSIENNSLRQILNFQVADESEMEEIE--------TVAGLASKCLSL 222
++ + S QYF ++ D +ME +E GL CL +
Sbjct: 224 PRHQQVFSTNQYF------------SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHM 271
Query: 223 SGRRRPTMKQV 233
R T +Q+
Sbjct: 272 DPTERLTCEQL 282
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLH-----SSASPPIIHG 88
LV ++ +G+LFD+++ + V + +++A TAS L +LH + P I H
Sbjct: 116 WLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 89 DVKSTNVLLDDNYKAKVADFGSSVLISSDNQT--AMTTKKIGTFVNLDPEYV---ITGKL 143
D+KS N+L+ N +AD G +V S T ++GT + PE + I K
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231
Query: 144 TE---KSDVYSFGVLLAEL 159
E ++D+Y+ G++ E+
Sbjct: 232 FESFKRADIYAMGLVFWEI 250
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNW 60
+N+ E++++ +++H N++ +L A LV++F+ T + I +S VL
Sbjct: 55 INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM--ETDLEVIIKDNSLVL--- 109
Query: 61 KTCLRIAAE---TASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD 117
T I A T L+YLH I+H D+K N+LLD+N K+ADFG + S
Sbjct: 110 -TPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165
Query: 118 NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELL 160
N+ ++ T PE + ++ D+++ G +LAELL
Sbjct: 166 NRA--YXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + K+ ++ +
Sbjct: 49 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--Q 104
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+++ L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L E+ G P
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Query: 11 VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAET 70
++S+++HK++V G C+ +LV EFV G+L ++ + + WK L +A +
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQL 122
Query: 71 ASALDYLHSSASPPIIHGDVKSTNVLL--DDNYKA------KVADFGSSVLISSDNQTAM 122
A+A+ +L + +IHG+V + N+LL +++ K K++D G S+ + + +
Sbjct: 123 AAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD---I 176
Query: 123 TTKKIGTFVNLDPEYVITGK-LTEKSDVYSFGVLLAELLTGL-KPGSGMALASNEGISMV 180
++I + PE + K L +D +SFG L E+ +G KP S +
Sbjct: 177 LQERIPW---VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----------- 222
Query: 181 QYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
+S R++ ++ + + +A L + C+ RP+ + + +L+ L
Sbjct: 223 ---------DSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
+E R++ +N +VK+ + + +V E+V G +F H+ ++ R + R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARF 145
Query: 67 -AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
AA+ +YLHS +I+ D+K N+L+D +V DFG + + T
Sbjct: 146 YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWX 197
Query: 126 KIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L P +++ + D ++ GVL+ E+ G P
Sbjct: 198 LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + SQV++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S GV++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + SQV++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S GV++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 21/167 (12%)
Query: 16 NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALD 75
+KN+++++ + LV+E + G++ HI Q N + R+ + A+ALD
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQ---KQKHFNEREASRVVRDVAAALD 125
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADF--GSSVLISSDNQTAMTTKKI--- 127
+LH+ I H D+K N+L + K K+ DF GS + + +++ T +TT ++
Sbjct: 126 FLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKL-NNSCTPITTPELTTP 181
Query: 128 -GTFVNLDPEY--VITGKLT---EKSDVYSFGVLLAELLTGLKPGSG 168
G+ + PE V T + T ++ D++S GV+L +L+G P G
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKT 62
F E ++ ++H ++VK++G +E + ++ E P G L ++ + S +VL T
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----T 126
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + + A+ YL S +H D+ N+L+ K+ DFG S I ++
Sbjct: 127 LVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
+ ++ + PE + + T SDV+ F V + E+L+ G +P
Sbjct: 184 SVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHI--HDKSSQVLRNWKT 62
F E ++ ++H ++VK++G +E + ++ E P G L ++ + S +VL T
Sbjct: 60 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----T 114
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
+ + + A+ YL S +H D+ N+L+ K+ DFG S I ++
Sbjct: 115 LVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
+ ++ + PE + + T SDV+ F V + E+L+ G +P
Sbjct: 172 SVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
F E ++ ++H ++VK++G +E + ++ E P G L H +++ L+ T +
Sbjct: 56 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKV-LTLV 112
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + A+ YL S +H D+ N+L+ K+ DFG S I ++ +
Sbjct: 113 LYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 169
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLT-GLKP 165
++ + PE + + T SDV+ F V + E+L+ G +P
Sbjct: 170 TRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
EL+++ + H +V + + + + +V + + G L H+ V +T
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHFKEETVKLFI 121
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
E ALDYL + IIH D+K N+LLD++ + DF + ++ + Q T
Sbjct: 122 CELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMA 175
Query: 128 GTFVNLDPEYVITGKLTEKS---DVYSFGVLLAELLTGLKP 165
GT + PE + K S D +S GV ELL G +P
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--C 166
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 111/240 (46%), Gaps = 41/240 (17%)
Query: 11 VVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAET 70
++S+++HK++V G C +LV EFV G+L ++ + + WK L +A +
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQL 122
Query: 71 ASALDYLHSSASPPIIHGDVKSTNVLL--DDNYKA------KVADFGSSVLISSDNQTAM 122
A A+ +L + +IHG+V + N+LL +++ K K++D G S+ + + +
Sbjct: 123 AWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD---I 176
Query: 123 TTKKIGTFVNLDPEYVITGK-LTEKSDVYSFGVLLAELLTGL-KPGSGMALASNEGISMV 180
++I + PE + K L +D +SFG L E+ +G KP S +
Sbjct: 177 LQERIPW---VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----------- 222
Query: 181 QYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
+S R++ ++ + + +A L + C+ RP+ + + +L+ L
Sbjct: 223 ---------DSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--C 166
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 39/170 (22%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFV------------PNGTLFDHIH 50
LR + H NVV+++ C E KV LV+E V P G + I
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 51 DKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS 110
D Q LR LD+LH++ I+H D+K N+L+ K+ADFG
Sbjct: 116 DLMRQFLR--------------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
Query: 111 SVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ + S Q A+ + T PE ++ D++S G + AE+
Sbjct: 159 ARIYSY--QMALAPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 116
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T
Sbjct: 117 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--C 171
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E RV+ H + + A V E+ G LF H+ S + + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE SAL+YLHS +++ D+K N++LD + K+ DFG SD T
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--C 166
Query: 128 GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + D + GV++ E++ G P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 16 NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALD 75
H N++ + + K +V E + G L D I + R L +T ++
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT---VE 130
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNY----KAKVADFGSSVLISSDNQTAMTTKKIGTFV 131
YLH+ ++H D+K +N+L D ++ DFG + + ++N MT FV
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 132 NLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
PE + D++S GVLL +LTG P
Sbjct: 188 A--PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKST 93
L+V E + G LF I D+ Q + I A+ YLHS I H DVK
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTE-REASEIXKSIGEAIQYLHSIN---IAHRDVKPE 190
Query: 94 NVLLDD---NYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVY 150
N+L N K+ DFG + +S N ++TT + + PE + K + D +
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYY-VAPEVLGPEKYDKSCDXW 247
Query: 151 SFGVLLAELLTGLKPGSGMALASNEGISM 179
S GV+ LL G P SN G+++
Sbjct: 248 SLGVIXYILLCGYPP-----FYSNHGLAI 271
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 8 ELRVVSQINHKNVVKIL----GACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC 63
E++++ + H+NV+ I + LE + + + + L+ + SQ L N C
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL---KSQQLSNDHIC 147
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD-NQTAM 122
+ L Y+HS+ ++H D+K +N+L++ K+ DFG + + + + T
Sbjct: 148 Y-FLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF 203
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 16 NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALD 75
H+NV++++ E LV+E + G++ HIH + N + + ASALD
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALD 125
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADF--GSSVLISSDNQTAMTTK---KI 127
+LH+ I H D+K N+L + + K+ DF GS + ++ D T +
Sbjct: 126 FLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 128 GTFVNLDPEYV-----ITGKLTEKSDVYSFGVLLAELLTGLKP-----GSGMALASNEGI 177
G+ + PE V ++ D++S GV+L LL+G P GS E
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 178 SMVQYFLY 185
Q L+
Sbjct: 243 PACQNMLF 250
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 138 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 193
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 16 NHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALD 75
H+NV++++ E LV+E + G++ HIH + N + + ASALD
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALD 125
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYK---AKVADF--GSSVLISSDNQTAMTTK---KI 127
+LH+ I H D+K N+L + + K+ DF GS + ++ D T +
Sbjct: 126 FLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 128 GTFVNLDPEYVITGK-----LTEKSDVYSFGVLLAELLTGLKP-----GSGMALASNEGI 177
G+ + PE V ++ D++S GV+L LL+G P GS E
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 178 SMVQYFLY 185
Q L+
Sbjct: 243 PACQNMLF 250
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 118 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 116 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKPGSGMAL 171
D + T T+ + T PE ++ K KS D++S G +LAE+L
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML----------- 220
Query: 172 ASNEGISMVQYFLYSIENNSLRQILNFQVADESEMEEIETVAGLASK--CLSLSGRRRPT 229
SN I +++L + L IL + E E++ + L ++ LSL + +
Sbjct: 221 -SNRPIFPGKHYL-----DQLNHILG--ILGSPEQEDLNCIINLKARNYLLSLPHKNKVP 272
Query: 230 MKQV-----SEELDRLKISHENYEHRRTEKRQSI 258
++ S+ LD L H+R E Q++
Sbjct: 273 WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKST 93
L++ E + G LF I ++ Q + I + +A+ +LHS I H DVK
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 94 NVLLDDNYK---AKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVY 150
N+L K K+ DFG Q A+ T + + PE + K + D++
Sbjct: 139 NLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYY-VAPEVLGPEKYDKSCDMW 194
Query: 151 SFGVLLAELLTGLKP-----GSGMALASNEGISMVQY 182
S GV++ LL G P G ++ I + QY
Sbjct: 195 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 231
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKST 93
L++ E + G LF I ++ Q + I + +A+ +LHS I H DVK
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 94 NVLLDDNYK---AKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVY 150
N+L K K+ DFG Q A+ T + + PE + K + D++
Sbjct: 158 NLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYY-VAPEVLGPEKYDKSCDMW 213
Query: 151 SFGVLLAELLTGLKP-----GSGMALASNEGISMVQY 182
S GV++ LL G P G ++ I + QY
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 118 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 122 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 2 NQVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWK 61
NQ+ + EL+V+ + N +V GA + E + G+L D + ++ ++
Sbjct: 59 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEIL 116
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQT 120
+ IA L YL I+H DVK +N+L++ + K+ DFG S LI S
Sbjct: 117 GKVSIA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 168
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M +GT + PE + + +SD++S G+ L EL G P
Sbjct: 169 -MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 39/170 (22%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFV------------PNGTLFDHIH 50
LR + H NVV+++ C E KV LV+E V P G + I
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 51 DKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS 110
D Q LR LD+LH++ I+H D+K N+L+ K+ADFG
Sbjct: 116 DLMRQFLR--------------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
Query: 111 SVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ + S Q A+ + T PE ++ D++S G + AE+
Sbjct: 159 ARIYSY--QMALDPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 35 LVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTN 94
V +++ G LF H+ + + + AAE ASAL YLHS I++ D+K N
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGYLHSLN---IVYRDLKPEN 169
Query: 95 VLLDDNYKAKVADFGSSVLISSDN--QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSF 152
+LLD + DFG + +N + T+ GT L PE + D +
Sbjct: 170 ILLDSQGHIVLTDFG----LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225
Query: 153 GVLLAELLTGLKP 165
G +L E+L GL P
Sbjct: 226 GAVLYEMLYGLPP 238
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 122 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 118 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 138 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 193
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 39/170 (22%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFV------------PNGTLFDHIH 50
LR + H NVV+++ C E KV LV+E V P G + I
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 51 DKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS 110
D Q LR LD+LH++ I+H D+K N+L+ K+ADFG
Sbjct: 116 DLMRQFLR--------------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
Query: 111 SVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ + S Q A+ + T PE ++ D++S G + AE+
Sbjct: 159 ARIYSY--QMALFPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 120 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 122 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 123 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 124 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 179
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 115 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 170
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 122 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 118 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFVPNG--TLFDHIHDKSSQVLRNW 60
LR + H NVV++ C ETK+ LV+E V T D + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVPT---- 119
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+T + + LD+LHS ++H D+K N+L+ + + K+ADFG + + S Q
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QM 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
A+T+ + T PE ++ D++S G + AE+
Sbjct: 175 ALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 116 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 73 ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD-NQTAMTTKKIGTFV 131
L Y+HS+ ++H D+K +N+LL+ K+ DFG + + D + T T+ + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 132 NLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI---SSDN-----QT 120
+T A+ LH S +IH D+K +N+L++ N KV DFG + +I ++DN Q
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 121 AMTTKKIGTFVNLDPEYVIT-GKLTEKSDVYSFGVLLAELL 160
+ T+ + T PE ++T K + DV+S G +LAEL
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 120 TQHLSNDHICYFLY-QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
D + T T+ + T PE ++ K KS D++S G +LAE+L+ + PG
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFVPNG--TLFDHIHDKSSQVLRNW 60
LR + H NVV++ C ETK+ LV+E V T D + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVPT---- 119
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+T + + LD+LHS ++H D+K N+L+ + + K+ADFG + + S Q
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QM 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
A+T+ + T PE ++ D++S G + AE+
Sbjct: 175 ALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ Q+ H NV+ + +L+ E V G LFD + K S + ++
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNYKA---KVADFGSSVLISSDNQTA 121
+ ++YLH+ I H D+K N+ LLD N K+ DFG ++ + +
Sbjct: 123 ---QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDG 172
Query: 122 MTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ K I GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + SQV++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+T + YLH++ +IH D+K N+ L+D+ K+ DFG + I D + T G
Sbjct: 150 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL--CG 204
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T + PE + + + D++S G +L LL G P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 126 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 181
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 182 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 118 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 9 LRVVSQINHKNVVKILGACL------ETKVPLLVYEFVPNG--TLFDHIHDKSSQVLRNW 60
LR + H NVV++ C ETK+ LV+E V T D + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVPT---- 119
Query: 61 KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQT 120
+T + + LD+LHS ++H D+K N+L+ + + K+ADFG + + S Q
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QM 174
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
A+T+ + T PE ++ D++S G + AE+
Sbjct: 175 ALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 120 TQHLSNDHICYFLY-QILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARV 175
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T T+ + T PE ++ K KS D++S G +LAE+L+
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKST 93
LL+ E G L + + S+ + T L+I +T A+ ++H PPIIH D+K
Sbjct: 110 LLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVE 167
Query: 94 NVLLDDNYKAKVADFGSSVLIS-------SDNQTAMTTKKI---GTFVNLDPEYV---IT 140
N+LL + K+ DFGS+ IS S + A+ ++I T + PE +
Sbjct: 168 NLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227
Query: 141 GKLTEKSDVYSFGVLL 156
+ EK D+++ G +L
Sbjct: 228 FPIGEKQDIWALGCIL 243
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ Q+ H NV+ + +L+ E V G LFD + K S + ++
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNYKA---KVADFGSSVLISSDNQTA 121
+ ++YLH+ I H D+K N+ LLD N K+ DFG ++ + +
Sbjct: 123 ---QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDG 172
Query: 122 MTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ K I GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ Q+ H NV+ + +L+ E V G LFD + K S + ++
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNYKA---KVADFGSSVLISSDNQTA 121
+ ++YLH+ I H D+K N+ LLD N K+ DFG ++ + +
Sbjct: 123 ---QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDG 172
Query: 122 MTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ K I GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + SQV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ Q+ H NV+ + +L+ E V G LFD + K S + ++
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNYKA---KVADFGSSVLISSDNQTA 121
+ ++YLH+ I H D+K N+ LLD N K+ DFG ++ + +
Sbjct: 123 ---QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDG 172
Query: 122 MTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ K I GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + SQV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ Q+ H NV+ + +L+ E V G LFD + K S + ++
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNYKA---KVADFGSSVLISSDNQTA 121
+ ++YLH+ I H D+K N+ LLD N K+ DFG ++ + +
Sbjct: 123 ---QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDG 172
Query: 122 MTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ K I GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ + E++ +S + H +V + A + +++YEF+ G LF+ + D+ +++ +
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--E 150
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL--DDNYKAKVADFGSSVLISSDNQT 120
+ + L ++H + +H D+K N++ + + K+ DFG + +
Sbjct: 151 AVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 207
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+TT GT PE + +D++S GVL LL+GL P G
Sbjct: 208 KVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI---SSDN-----QT 120
+T A+ LH S +IH D+K +N+L++ N KV DFG + +I ++DN Q
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 121 AMTTKKIGTFVNLDPEYVIT-GKLTEKSDVYSFGVLLAELL 160
+ T+ + T PE ++T K + DV+S G +LAEL
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 3 QVFQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
+ + E++ +S + H +V + A + +++YEF+ G LF+ + D+ +++ +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--E 256
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLL--DDNYKAKVADFGSSVLISSDNQT 120
+ + L ++H + +H D+K N++ + + K+ DFG + +
Sbjct: 257 AVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+TT GT PE + +D++S GVL LL+GL P G
Sbjct: 314 KVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRNWKTCL 64
E +++++++ + +V L ETK L LV + G + HI+ D+ + + +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A+ S L++LH II+ D+K NVLLDD+ +++D G +V + + QT T
Sbjct: 294 -YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA-GQTK-TK 347
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE ++ + D ++ GV L E++ P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
Q E V Q ++ + L +C +T+ L V E+V G L H+ + + +
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-- 125
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG--SSVLISSDNQTAM 122
+AE + AL+YLH II+ D+K NVLLD K+ D+G L D
Sbjct: 126 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---- 177
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
T+ GT + PE + D ++ GVL+ E++ G P + + N + Y
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
Query: 183 FLYSIENNSLR 193
I +R
Sbjct: 238 LFQVILEKQIR 248
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + SQV++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRNWKTCL 64
E +++++++ + +V L ETK L LV + G + HI+ D+ + + +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A+ S L++LH II+ D+K NVLLDD+ +++D G +V + + QT T
Sbjct: 294 -YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA-GQTK-TK 347
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE ++ + D ++ GV L E++ P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRNWKTCL 64
E +++++++ + +V L ETK L LV + G + HI+ D+ + + +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A+ S L++LH II+ D+K NVLLDD+ +++D G +V + + QT T
Sbjct: 294 -YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA-GQTK-TK 347
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE ++ + D ++ GV L E++ P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA--KVADFGSSVLISSDNQTAM 122
+ A LD LH + IIH D+K N+LL ++ KV DFGSS ++Q
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVY 257
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
T I + PE ++ + D++S G +LAELLTG L PG
Sbjct: 258 TX--IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
+ E+ ++ Q+ H N++ + +L+ E V G LFD + K S + ++
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNV-LLDDNYKA---KVADFGSSVLISSDNQTA 121
+ ++YLH+ I H D+K N+ LLD N K+ DFG ++ + +
Sbjct: 123 ---QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDG 172
Query: 122 MTTKKI-GTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSG 168
+ K I GT + PE V L ++D++S GV+ LL+G P G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA--KVADFGSSVLISSDNQTAM 122
+ A LD LH + IIH D+K N+LL ++ KV DFGSS ++Q
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVY 257
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
T I + PE ++ + D++S G +LAELLTG L PG
Sbjct: 258 TX--IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL-LVYEFVPNGTLFDHIH--DKSSQVLRNWKTCL 64
E +++++++ + +V L ETK L LV + G + HI+ D+ + + +
Sbjct: 235 EKKILAKVHSRFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
A+ S L++LH II+ D+K NVLLDD+ +++D G +V + + QT T
Sbjct: 294 -YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA-GQTK-TK 347
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT + PE ++ + D ++ GV L E++ P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
Q E V Q ++ + L +C +T+ L V E+V G L H+ + + +
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-- 157
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG--SSVLISSDNQTAM 122
+AE + AL+YLH II+ D+K NVLLD K+ D+G L D
Sbjct: 158 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---- 209
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
T+ GT + PE + D ++ GVL+ E++ G P + + N + Y
Sbjct: 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
Query: 183 FLYSIENNSLR 193
I +R
Sbjct: 270 LFQVILEKQIR 280
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
++ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
Q E V Q ++ + L +C +T+ L V E+V G L H+ + + +
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-- 110
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG--SSVLISSDNQTAM 122
+AE + AL+YLH II+ D+K NVLLD K+ D+G L D
Sbjct: 111 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---- 162
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
T+ GT + PE + D ++ GVL+ E++ G P + + N + Y
Sbjct: 163 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
Query: 183 FLYSIENNSLR 193
I +R
Sbjct: 223 LFQVILEKQIR 233
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 6 QHELRVVSQINHKNVVKILGACLETKVPLL-VYEFVPNGTLFDHIHDKSSQVLRNWKTCL 64
Q E V Q ++ + L +C +T+ L V E+V G L H+ + + +
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-- 114
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG--SSVLISSDNQTAM 122
+AE + AL+YLH II+ D+K NVLLD K+ D+G L D
Sbjct: 115 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---- 166
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
T+ GT + PE + D ++ GVL+ E++ G P + + N + Y
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 183 FLYSIENNSLR 193
I +R
Sbjct: 227 LFQVILEKQIR 237
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+ A +++L AS IH D+ + N+LL + K+ DFG + I D
Sbjct: 201 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIE 188
+ PE + T +SDV+SFGVLL E+ + + + G+ + + F
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFC---- 306
Query: 189 NNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
L++ + D + E +T+ C +RPT ++ E L L
Sbjct: 307 -RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 30/177 (16%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTAMT 123
+I T AL++L + IIH D+K +N+LLD + K+ DFG S L+ S
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS----IAK 182
Query: 124 TKKIGTFVNLDPEYVITGKLTE----KSDVYSFGVLLAELLTGLKPGSGMALASNEGISM 179
T+ G + PE + + +SDV+S G+ L EL TG P
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP-------------- 228
Query: 180 VQYFLYSIENNSLRQILNF---QVADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
Y ++ + L Q++ Q+++ E E + + CL+ +RP K++
Sbjct: 229 --YPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+ A +++L AS IH D+ + N+LL + K+ DFG + I D
Sbjct: 199 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIE 188
+ PE + T +SDV+SFGVLL E+ + + + G+ + + F
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFC---- 304
Query: 189 NNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
L++ + D + E +T+ C +RPT ++ E L L
Sbjct: 305 -RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 122 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T + + T PE ++ K KS D++S G +LAE+L+
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 54 SQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
+Q L N C + L Y+HS+ ++H D+K +N+LL+ K+ DFG + +
Sbjct: 123 TQHLSNDHICY-FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Query: 114 ISSD-NQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT 161
D + T + + T PE ++ K KS D++S G +LAE+L+
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+ A +++L AS IH D+ + N+LL + K+ DFG + I D
Sbjct: 206 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIE 188
+ PE + T +SDV+SFGVLL E+ + + + G+ + + F
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFC---- 311
Query: 189 NNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
L++ + D + E +T+ C +RPT ++ E L L
Sbjct: 312 -RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 358
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+ A +++L AS IH D+ + N+LL + K+ DFG + I D
Sbjct: 208 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIE 188
+ PE + T +SDV+SFGVLL E+ + + + G+ + + F
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFC---- 313
Query: 189 NNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
L++ + D + E +T+ C +RPT ++ E L L
Sbjct: 314 -RRLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 360
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 32/207 (15%)
Query: 15 INHKNVVKILGACLETKVP----LLVYEFVPNGTLFDHIH---DKSSQVLRNWKTCLRIA 67
NH N+++++ CL + L+ F GTL++ I DK + + + L +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED--QILWLL 140
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGS---SVLISSDNQTAMTT 124
L+ +H+ H D+K TN+LL D + + D GS + + ++ A+T
Sbjct: 141 LGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 125 KKIG----TFVNLDPEYVITGK---LTEKSDVYSFGVLLAELLTGLKP-------GSGMA 170
+ T PE + E++DV+S G +L ++ G P G +A
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257
Query: 171 LASNEGISMVQYFLYSIENNSLRQILN 197
LA +S+ Q +S ++L Q+LN
Sbjct: 258 LAVQNQLSIPQSPRHS---SALWQLLN 281
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 184
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLISSDNQTA-M 122
+IA AL++LHS S +IH DVK +NVL++ + K+ DFG S L+ S +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
K ++PE G + KSD++S G+ + EL I Y
Sbjct: 215 GCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIEL----------------AILRFPY 257
Query: 183 FLYSIENNSLRQILNFQ----VADESEMEEIETVAGLASKCLSLSGRRRPTMKQV 233
+ L+Q++ AD+ E ++ S+CL + + RPT ++
Sbjct: 258 DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD----FTSQCLKKNSKERPTYPEL 308
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+T + YLH++ +IH D+K N+ L+D+ K+ DFG + I D + G
Sbjct: 150 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL--CG 204
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T + PE + + + D++S G +L LL G P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKV--PLLVYEFVPNGTLFDHIHDKSSQVLRNWKT 62
F E + +H NV+ +LGAC P L+ + P G+L++ +H+ ++ V+
Sbjct: 54 FNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ-SQ 112
Query: 63 CLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAM 122
++ A + A +LH + P I + S +V +D++ A+++ S +
Sbjct: 113 AVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYA 171
Query: 123 TTKKIGTFVNLDPEYVITGKLTEK--------SDVYSFGVLLAELLT 161
P +V L +K +D +SF VLL EL+T
Sbjct: 172 ------------PAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+T + YLH++ +IH D+K N+ L+D+ K+ DFG + I D + G
Sbjct: 134 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL--CG 188
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T + PE + + + D++S G +L LL G P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 19 NVVKILGACLE--TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDY 76
N++K++ + +K P LV+E++ N T F ++ Q+L ++ + E ALDY
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYI-NNTDFKQLY----QILTDFDIRFYMY-ELLKALDY 152
Query: 77 LHSSASPPIIHGDVKSTNVLLDDNYKA-KVADFGSSVLISSDNQTAMTTKKIGTFVNLDP 135
HS I+H DVK NV++D K ++ D+G + + + ++ + P
Sbjct: 153 CHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV---RVASRYFKGP 206
Query: 136 EYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
E ++ ++ + S D++S G +LA ++ +P
Sbjct: 207 ELLVDYQMYDYSLDMWSLGCMLASMIFRREP 237
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 19 NVVKILGACLE--TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDY 76
N++K++ + +K P LV+E++ N T F ++ Q+L ++ + E ALDY
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYI-NNTDFKQLY----QILTDFDIRFYMY-ELLKALDY 147
Query: 77 LHSSASPPIIHGDVKSTNVLLDDNYKA-KVADFGSSVLISSDNQTAMTTKKIGTFVNLDP 135
HS I+H DVK NV++D K ++ D+G + + + ++ + P
Sbjct: 148 CHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV---RVASRYFKGP 201
Query: 136 EYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
E ++ ++ + S D++S G +LA ++ +P
Sbjct: 202 ELLVDYQMYDYSLDMWSLGCMLASMIFRREP 232
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+T + YLH++ +IH D+K N+ L+D+ K+ DFG + I D + G
Sbjct: 150 QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL--CG 204
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
T + PE + + + D++S G +L LL G P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKA--KVADFGSSVLISSDNQTAM 122
+ A LD LH + IIH D+K N+LL ++ KV DFGSS +
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQR 255
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
I + PE ++ + D++S G +LAELLTG L PG
Sbjct: 256 VYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD---NQTA 121
++ AL YL +IH DVK +N+LLD+ + K+ DFG S + D +++A
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 122 -----MTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
M ++I P+Y I ++DV+S G+ L EL TG P
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDI------RADVWSLGISLVELATGQFP 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI---SSDN-----QT 120
+T A+ LH S +IH D+K +N+L++ N KV DFG + +I ++DN Q
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 121 AMTTKKIGTFVNLDPEYVIT-GKLTEKSDVYSFGVLLAELL 160
+ + + T PE ++T K + DV+S G +LAEL
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 9/182 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL-FDHIHDKSSQVLRNWKTC 63
+ E + + H ++V++L + +V+EF+ L F+ + + + +
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQT 120
+ AL Y H + IIH DVK VLL +++ K+ FG ++ +
Sbjct: 135 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 191
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
A ++GT + PE V + DV+ GV+L LL+G P G EGI
Sbjct: 192 A--GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKG 249
Query: 181 QY 182
+Y
Sbjct: 250 KY 251
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 9/182 (4%)
Query: 5 FQHELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL-FDHIHDKSSQVLRNWKTC 63
+ E + + H ++V++L + +V+EF+ L F+ + + + +
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 64 LRIAAETASALDYLHSSASPPIIHGDVKSTNVLL---DDNYKAKVADFGSSVLISSDNQT 120
+ AL Y H + IIH DVK VLL +++ K+ FG ++ +
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189
Query: 121 AMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMV 180
A ++GT + PE V + DV+ GV+L LL+G P G EGI
Sbjct: 190 A--GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKG 247
Query: 181 QY 182
+Y
Sbjct: 248 KY 249
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 10 RVVSQINHKNVVKILGACLETKVPLLVYE-FVPNGTLFDHIHDKSSQVLRNWKTCLRIAA 68
+V + H V+++L + +LV E +P LFD+I +K + C
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCF--FG 146
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYK-AKVADFGSSVLISSDNQTAMTTKKI 127
+ +A+ + HS ++H D+K N+L+D AK+ DFGS L+ + T
Sbjct: 147 QVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD---- 199
Query: 128 GTFVNLDPEYVITGKLTE-KSDVYSFGVLLAELLTG 162
GT V PE++ + + V+S G+LL +++ G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFV------PNGTLFDHIHDKSSQVLRNWK 61
EL+++ H N++ I L VP ++ V L IH L + +
Sbjct: 103 ELKILKHFKHDNIIAI-KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 161
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSS--VLISSDNQ 119
L + L Y+HS+ +IH D+K +N+L+++N + K+ DFG + + S
Sbjct: 162 YFL---YQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 215
Query: 120 TAMTTKKIGTFVNLDPEYVIT-GKLTEKSDVYSFGVLLAELLT--GLKPG 166
T+ + T PE +++ + T+ D++S G + E+L L PG
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD--NQTAM 122
+IA AL++LHS S +IH DVK +NVL++ + K+ DFG S + D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
K ++PE G + KSD++S G+ + EL I Y
Sbjct: 171 GCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIEL----------------AILRFPY 213
Query: 183 FLYSIENNSLRQILNFQ----VADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
+ L+Q++ AD+ E ++ S+CL + + RPT ++ +
Sbjct: 214 DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD----FTSQCLKKNSKERPTYPELMQ 266
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFV------PNGTLFDHIHDKSSQVLRNWK 61
EL+++ H N++ I L VP ++ V L IH L + +
Sbjct: 104 ELKILKHFKHDNIIAI-KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSS--VLISSDNQ 119
L + L Y+HS+ +IH D+K +N+L+++N + K+ DFG + + S
Sbjct: 163 YFLY---QLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 216
Query: 120 TAMTTKKIGTFVNLDPEYVIT-GKLTEKSDVYSFGVLLAELLT--GLKPG 166
T+ + T PE +++ + T+ D++S G + E+L L PG
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 30/167 (17%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTC---- 63
EL ++ +NHKN++ +L F P TL + L + C
Sbjct: 71 ELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIH 118
Query: 64 LRIAAETASALDY--------LHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS 115
+ + E S L Y LHS+ IIH D+K +N+++ + K+ DFG L
Sbjct: 119 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LAR 172
Query: 116 SDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG 162
+ + M T + T PE ++ E D++S G ++ EL+ G
Sbjct: 173 TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+ A +++L S IH D+ + N+LL +N K+ DFG + I +
Sbjct: 207 QVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 129 TFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLYSIE 188
+ PE + + KSDV+S+GVLL E+ + + + G+ M + F
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-------LGGSPYPGVQMDEDFC---- 312
Query: 189 NNSLRQILNFQVADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSEELDRL 240
+ LR+ + + + S E + + C + RP ++ E+L L
Sbjct: 313 -SRLREGMRMRAPEYSTPE----IYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 76 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 128
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 183
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 184 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 82 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 134
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 135 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 189
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 190 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 8 ELRVVSQINHKNVVKILGACLE--TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
E V+ ++NHKN+VK+ E T+ +L+ EF P G+L+ + + S+ L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL----DDNYKAKVADFGSSVLISSDNQTA 121
+ + +++L + I+H ++K N++ D K+ DFG++ + D Q
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 122 MTTKKIGTFVNLDP---EYVITGKLTEKS-----DVYSFGVLLAELLTGLKP 165
GT L P E + K +K D++S GV TG P
Sbjct: 174 XL---YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 76 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 128
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 183
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 184 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 77 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 129
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 185 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 91 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 143
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 144 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 199 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 83 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 135
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 136 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 190
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 191 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 94 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 146
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 147 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 201
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 202 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 83 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 135
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 136 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 190
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 191 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 90 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 142
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 143 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 197
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 198 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 83 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 135
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 136 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 190
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 191 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 91 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 143
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 144 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 199 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 77 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 129
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 185 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 81 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 133
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 134 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 188
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 189 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 36/176 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQV---LRNWKT 62
ELR++ + H+NV+ +L F P ++ F ++ ++ + L N
Sbjct: 77 ELRLLKHLKHENVIGLLDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVK 124
Query: 63 CLRIAAETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
C ++ E L Y+HS+ IIH D+K +NV ++++ + ++ DFG +
Sbjct: 125 CQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG--LAR 179
Query: 115 SSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
+D + T + T PE ++ + D++S G ++AELL G L PGS
Sbjct: 180 QADEE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 73 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 125
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDE 180
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 181 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 36/176 (20%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTL--FDHIHDKSSQV---LRNWKT 62
ELR++ + H+NV+ +L F P ++ F ++ ++ + L N
Sbjct: 69 ELRLLKHLKHENVIGLLDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVK 116
Query: 63 CLRIAAETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLI 114
C ++ E L Y+HS+ IIH D+K +NV ++++ + ++ DFG +
Sbjct: 117 CQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG--LAR 171
Query: 115 SSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
+D + T + T PE ++ + D++S G ++AELL G L PGS
Sbjct: 172 QADEE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSD--NQTAM 122
+IA AL++LHS S +IH DVK +NVL++ + K DFG S + D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 123 TTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKPGSGMALASNEGISMVQY 182
K ++PE G + KSD++S G+ EL I Y
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIEL----------------AILRFPY 240
Query: 183 FLYSIENNSLRQILNFQ----VADESEMEEIETVAGLASKCLSLSGRRRPTMKQVSE 235
+ L+Q++ AD+ E ++ S+CL + + RPT ++ +
Sbjct: 241 DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD----FTSQCLKKNSKERPTYPELXQ 293
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 77 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 129
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 185 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 78 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 130
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 185
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 77 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 129
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDE 184
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 185 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 67 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCAKLT 119
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 175 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 90 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 142
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 143 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 197
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 198 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 8 ELRVVSQINHKNVVKILGACLE--TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLR 65
E V+ ++NHKN+VK+ E T+ +L+ EF P G+L+ + + S+ L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLL----DDNYKAKVADFGSSVLISSDNQTA 121
+ + +++L + I+H ++K N++ D K+ DFG++ + D Q
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 122 MTTKKIGTFVNLDP---EYVITGKLTEKS-----DVYSFGVLLAELLTGLKP 165
GT L P E + K +K D++S GV TG P
Sbjct: 174 SL---YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 82 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 134
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 135 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 189
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 190 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 73 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 125
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 180
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 181 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 15 INHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASAL 74
+ H N+V+ L +V E+ G LF+ I + + + + S +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 127
Query: 75 DYLHSSASPPIIHGDVKSTNVLLDDN--YKAKVADFG---SSVLISSDNQTAMTTKKIGT 129
Y H+ + H D+K N LLD + + K+ DFG SSVL S T T I
Sbjct: 128 SYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 130 FVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
V L EY GK+ +DV+S GV L +L G P
Sbjct: 185 EVLLKKEY--DGKV---ADVWSCGVTLYVMLVGAYP 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 131
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M
Sbjct: 132 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMV 185
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ E D++S G ++ E++ G L PG+
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 73 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 125
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 180
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 181 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 76 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 128
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 183
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 184 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 70 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 122
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 123 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 177
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 178 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 73 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 125
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 180
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 181 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 76 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 128
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 183
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 184 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 78 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 130
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + + +
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-- 185
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 15 INHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASAL 74
+ H N+V+ L +V E+ G LF+ I + + + + S +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 75 DYLHSSASPPIIHGDVKSTNVLLDDN--YKAKVADFG---SSVLISSDNQTAMTTKKIGT 129
Y H+ + H D+K N LLD + + K+ DFG SSVL S T T I
Sbjct: 129 SYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 130 FVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
V L EY GK+ +DV+S GV L +L G P
Sbjct: 186 EVLLKKEY--DGKV---ADVWSCGVTLYVMLVGAYP 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 78 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 130
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + + +
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-- 185
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 17 HKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDY 76
H N++ + + K +V E G L D I + R L +T ++Y
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT---VEY 131
Query: 77 LHSSASPPIIHGDVKSTNVLLDDNY----KAKVADFGSSVLISSDNQTAMTTKKIGTFVN 132
LH+ ++H D+K +N+L D ++ DFG + + ++N T FV
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 133 LDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
PE + D++S GVLL LTG P
Sbjct: 189 --PEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 78 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 130
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + + +
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-- 185
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 67 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 119
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 175 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 68 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 120
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 121 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 175
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 176 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 68 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 120
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 121 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 175
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 176 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 69 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 121
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 122 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 176
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 177 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 67 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 119
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 175 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
A + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 MA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
A + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 MA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 1 MNQVFQHELRVVSQINHKNVVKILGACLETKVP--LLVYEFVPNGTLFD--HIHDKSSQV 56
+ QV+Q E+ ++ +++H NVVK++ + +V+E V G + + + S
Sbjct: 80 IEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 57 LRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG-SSVLIS 115
R + + ++YLH IIH D+K +N+L+ ++ K+ADFG S+
Sbjct: 139 ARFY------FQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 116 SDNQTAMTTKKIGTFVNLDPE------YVITGKLTEKSDVYSFGVLLAELLTGLKP 165
SD A+ + +GT + PE + +GK DV++ GV L + G P
Sbjct: 190 SD---ALLSNTVGTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQCP 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 91 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 143
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +
Sbjct: 144 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMX 200
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T+ PE ++ + D++S G ++AELLTG L PG+
Sbjct: 201 GXVATRWYRA-----PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 100 ELRLLKHMKHENVIGLL----DVFTPATSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 152
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 153 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG--LARHTDDE 207
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 208 ---MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 67 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 119
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
A + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 175 MA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 94 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 146
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +
Sbjct: 147 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMX 203
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T+ PE ++ + D++S G ++AELLTG L PG+
Sbjct: 204 GYVATRWYRA-----PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDH---------IHDKSSQVL 57
ELR++ + H+NV+ +L F P+ TL D + +++
Sbjct: 73 RELRLLKHMRHENVIGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLM 120
Query: 58 RNWK----TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVL 113
++ K + + L Y+H++ IIH D+K N+ ++++ + K+ DFG +
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ 177
Query: 114 ISSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG 162
S+ + T+ PE ++ + T+ D++S G ++AE++TG
Sbjct: 178 ADSEMXGXVVTRWYRA-----PEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AAE L+++H+ +++ D+K N+LLD++ +++D G + S A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----S 350
Query: 127 IGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
+GT + PE + G + S D +S G +L +LL G P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AAE L+++H+ +++ D+K N+LLD++ +++D G + S A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----S 350
Query: 127 IGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
+GT + PE + G + S D +S G +L +LL G P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMS 122
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 123 YLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMT 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AAE L+++H+ +++ D+K N+LLD++ +++D G + S A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----S 350
Query: 127 IGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
+GT + PE + G + S D +S G +L +LL G P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 124 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 177
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 15 INHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASAL 74
+ H N+V+ L +V E+ G LF+ I + + + + S +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 75 DYLHSSASPPIIHGDVKSTNVLLDDN--YKAKVADFG---SSVLISSDNQTAMTTKKIGT 129
Y H+ + H D+K N LLD + + K+ADFG +SVL S T I
Sbjct: 129 SYAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
Query: 130 FVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
V L EY GK+ +DV+S GV L +L G P
Sbjct: 186 EVLLKKEY--DGKV---ADVWSCGVTLYVMLVGAYP 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 122
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 123 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 176
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNG--TLFDHIH-DKSSQVLRNWKTCL 64
E+ ++ ++ HKN+V++ K LV+EF FD + D ++++++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF---- 106
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ L + HS ++H D+K N+L++ N + K+ADFG + +
Sbjct: 107 --LFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI--PVRCYS 159
Query: 125 KKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
++ T P+ + KL S D++S G + AEL +P
Sbjct: 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 67 AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKK 126
AAE L+++H+ +++ D+K N+LLD++ +++D G + S A
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----S 349
Query: 127 IGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
+GT + PE + G + S D +S G +L +LL G P
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ D+G + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 184
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ T PE ++ E D++S G ++ E++
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 110 FQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 124 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 177
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 184
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 128
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 129 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 182
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 168 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 221
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ T PE ++ E D++S G ++ E++
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
Query: 8 ELRVVSQINHKNVVKILGAC-LETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI 66
E+ ++ ++NH N+VK+L E K+ L+ F+H+H ++ KT +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLV----------FEHVH-------QDLKTFMDA 93
Query: 67 AAETASALDYLHS-----------SASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS 115
+A T L + S S ++H D+K N+L++ K+ADFG +
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 116 SDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
+T T ++ T PE ++ K + D++S G + AE++T L PG
Sbjct: 154 VPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDP 135
YLH + +IH D+K N+ L+++ + K+ DFG + + D + T GT + P
Sbjct: 132 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAP 186
Query: 136 EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
E + + + DV+S G ++ LL G P
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 116
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 171
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 172 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPG 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDP 135
YLH + +IH D+K N+ L+++ + K+ DFG + + D + T GT + P
Sbjct: 132 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAP 186
Query: 136 EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
E + + + DV+S G ++ LL G P
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 238
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 293
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 294 RPSDRPTFEEIQ 305
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDP 135
YLH + +IH D+K N+ L+++ + K+ DFG + + D + T GT + P
Sbjct: 136 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAP 190
Query: 136 EYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
E + + + DV+S G ++ LL G P
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 116
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 171
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 172 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 213
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 168 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 221
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELL 160
+ T PE ++ E D++S G ++ E++
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 108
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 163
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 260
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 261 RPSDRPTFEEIQ 272
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 36/149 (24%)
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISS--------- 116
+ + + YLHS ++H D+K +N+LL+ KVADFG S +
Sbjct: 114 VVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 117 ----------DNQTAMTTKKIGTFVNLDPEYVI-TGKLTEKSDVYSFGVLLAELLTG--L 163
D+ + T + T PE ++ + K T+ D++S G +L E+L G +
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 164 KPGSG-----------MALASNEGISMVQ 181
PGS + SNE + +Q
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQ 259
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKS------SQVLRNWK 61
ELR++ + H+NV+ +L + P E + L H+ SQ L +
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH 126
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
I + L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++
Sbjct: 127 VQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFG--LCRHTDDE-- 178
Query: 122 MTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 108
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 163
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 110
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 165
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 261
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 262 RPSDRPTFEEIQ 273
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 288
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 289 RPSDRPTFEEIQ 300
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 108
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 163
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 113
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T T ++
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEV 168
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 210
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 30/167 (17%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
EL ++ +NHKN++ +L F P TL + L + C I
Sbjct: 73 ELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIH 120
Query: 68 AE------------TASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS 115
E + +LHS+ IIH D+K +N+++ + K+ DFG L
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LAR 174
Query: 116 SDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG 162
+ M T + T PE ++ D++S G ++ EL+ G
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 288
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 289 RPSDRPTFEEIQ 300
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NVL+D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 73 ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVN 132
L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++ T + T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE---MTGYVATRWY 188
Query: 133 LDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
PE ++ + D++S G ++AELLTG L PG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSXECQHLIRWCLAL 273
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 274 RPSDRPTFEEIQ 285
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 241
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 242 RPSDRPTFEEIQ 253
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 213
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 268
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 269 RPSDRPTFEEIQ 280
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSXECQHLIRWCLAL 274
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 275 RPSDRPTFEEIQ 286
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSXECQHLIRWCLAL 274
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 275 RPSDRPTFEEIQ 286
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 225
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 280
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 281 RPSDRPTFEEIQ 292
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 273
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 274 RPSDRPTFEEIQ 285
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 261
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 262 RPSDRPTFEEIQ 273
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 205
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 260
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 261 RPSDRPTFEEIQ 272
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 134
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 135 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 188
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 189 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 206
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFL---YSIENNSL-RQILNF 198
+S V+S G+LL +++ G P +E I Q F S E L R L
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 261
Query: 199 QVADESEMEEIE 210
+ D EEI+
Sbjct: 262 RPXDRPTFEEIQ 273
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLF--DHIHDKSSQVLRNWKTCLR 65
ELR++ + H+NV+ +L E TL D + SQ L + +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD-EHVQF 135
Query: 66 IAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTK 125
+ + L Y+HS+ IIH D+K +NV ++++ + ++ DFG + +D + T
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG--LARQADEE---MTG 187
Query: 126 KIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
+ T PE ++ + D++S G ++AELL G L PGS
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 241
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 242 RPSDRPTFEEIQ 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 247 RPSDRPTFEEIQ 258
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 233
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 288
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 289 RPSDRPTFEEIQ 300
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 123
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M T
Sbjct: 124 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMT 177
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
+ T PE ++ E D++S G ++ E++ L PG
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 73 ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVN 132
L Y+HS+ IIH D+K +N+ ++++ + K+ DFG + +D++ T + T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE---MTGYVATRWY 188
Query: 133 LDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
PE ++ + D++S G ++AELLTG L PG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 245
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 246 RPSDRPTFEEIQ 257
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 189
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 244
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 245 RPSDRPTFEEIQ 256
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 247 RPSDRPTFEEIQ 258
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 191
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 247 RPSDRPTFEEIQ 258
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 245
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 246 RPSDRPTFEEIQ 257
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ FG + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 274
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 275 RPSDRPTFEEIQ 286
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 273
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 274 RPSDRPTFEEIQ 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 219
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 274
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 275 RPSDRPTFEEIQ 286
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 105 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 155
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 156 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 212
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 213 DMWSLGCMLASMIFRKEP 230
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 218
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 273
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 274 RPSDRPTFEEIQ 285
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 34 LLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGDVKST 93
+L+ E+ G +F + ++++ +R+ + + YLH + I+H D+K
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEMVSE-NDVIRLIKQILEGVYYLHQNN---IVHLDLKPQ 160
Query: 94 NVLLDDNYK---AKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVY 150
N+LL Y K+ DFG S I + +GT L PE + +T +D++
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSRKIG---HACELREIMGTPEYLAPEILNYDPITTATDMW 217
Query: 151 SFGVLLAELLTGLKPGSG 168
+ G++ LLT P G
Sbjct: 218 NIGIIAYMLLTHTSPFVG 235
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 111 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 161
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 162 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 218
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 219 DMWSLGCMLASMIFRKEP 236
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 105 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 155
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 156 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 212
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 213 DMWSLGCMLASMIFRKEP 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI--GTFVNL 133
YLH + +IH D+K N+ L+++ + K+ DFG + + D + KK+ GT +
Sbjct: 130 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----RKKVLCGTPNYI 182
Query: 134 DPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
PE + + + DV+S G ++ LL G P
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMME 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
++ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 15 INHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASAL 74
+ H N+V+ L +V E+ G LF+ I + + + + S +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 75 DYLHSSASPPIIHGDVKSTNVLLDDN--YKAKVADFG---SSVLISSDNQTAMTTKKIGT 129
Y H+ + H D+K N LLD + + K+ FG SSVL S T T I
Sbjct: 129 SYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 130 FVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
V L EY GK+ +DV+S GV L +L G P
Sbjct: 186 EVLLKKEY--DGKV---ADVWSCGVTLYVMLVGAYP 216
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F ++ Q L ++ + E ALDY HS I+H D
Sbjct: 104 SRTPALVFEHV-NNTDFKQLY----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 154
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 155 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 211
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 212 DMWSLGCMLASMIFRKEP 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 85 IIHGDVKSTNVLLDDNY-KAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKL 143
++H D+K N+L+D N + K+ DFGS L+ + + T GT V PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 144 TEKS-DVYSFGVLLAELLTGLKPGSGMALASNEGISMVQYFLY----SIENNSLRQILNF 198
+S V+S G+LL +++ G P +E I Q F S + +R L
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 241
Query: 199 QVADESEMEEIE 210
+ +D EEI+
Sbjct: 242 RPSDRPTFEEIQ 253
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI--GTFVNL 133
YLH + +IH D+K N+ L+++ + K+ DFG + + D + KK+ GT +
Sbjct: 154 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----RKKVLCGTPNYI 206
Query: 134 DPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
PE + + + DV+S G ++ LL G P
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 15 INHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASAL 74
+ H N+V+ L +V E+ G LF+ I + + + + S +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 75 DYLHSSASPPIIHGDVKSTNVLLDDN--YKAKVADFG---SSVLISSDNQTAMTTKKIGT 129
Y H+ + H D+K N LLD + + K+ FG SSVL S T T I
Sbjct: 129 SYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 130 FVNLDPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
V L EY GK+ +DV+S GV L +L G P
Sbjct: 186 EVLLKKEY--DGKV---ADVWSCGVTLYVMLVGAYP 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ DF + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF--YLARHTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 76 YLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI--GTFVNL 133
YLH + +IH D+K N+ L+++ + K+ DFG + + D + KK+ GT +
Sbjct: 156 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----RKKVLCGTPNYI 208
Query: 134 DPEYVITGKLTEKSDVYSFGVLLAELLTGLKP 165
PE + + + DV+S G ++ LL G P
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 6 QHELRVVSQINHKNVVKILGACL--ETKVPLLVYEFVPNGT--LFDHIHDKSSQVLRNWK 61
+ E++++ ++ HKNV++++ E + +V E+ G + D + +K V +
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG 113
Query: 62 TCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLIS--SDNQ 119
++ L+YLHS I+H D+K N+LL K++ G + + + +
Sbjct: 114 YFCQLI----DGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 120 TAMTTKKIGTFVNLDPEYVITGKLTE---KSDVYSFGVLLAELLTGLKPGSG 168
T T++ F P + G T K D++S GV L + TGL P G
Sbjct: 167 TCRTSQGSPAF---QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ + L D + D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 33/119 (27%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNY-------------------------KA 103
E AL+YL + + H D+K N+LLDD Y
Sbjct: 145 EILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 104 KVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG 162
K+ DFG + S + + + T++ PE ++ SD++SFG +LAEL TG
Sbjct: 202 KLIDFGCATFKSDYHGSIINTRQYRA-----PEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 30 TKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIAAETASALDYLHSSASPPIIHGD 89
++ P LV+E V N T F + Q L ++ + E ALDY HS I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQL----RQTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 90 VKSTNVLLD-DNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEKS- 147
VK NV++D ++ K ++ D+G + + + ++ + PE ++ ++ + S
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSL 213
Query: 148 DVYSFGVLLAELLTGLKP 165
D++S G +LA ++ +P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ D G + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
AE A+D +H +H D+K N+LLD ++ADFGS + + +D T + +
Sbjct: 169 AEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-TVRSLVAV 224
Query: 128 GTFVNLDPEYV-------ITGKLTEKSDVYSFGVLLAELLTGLKP 165
GT L PE + TG + D ++ GV E+ G P
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ + L D + D S+
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYL 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 166
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ D G + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ + L D + D S+
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYL 112
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 167
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLR---NWKTCL 64
EL ++ +NHKN++ +L K + EF + + + QV++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ + + +LHS+ IIH D+K +N+++ + K+ DFG L + + M
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMME 183
Query: 125 KKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG--LKPG 166
++ T PE ++ E D++S G ++ E++ L PG
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 108
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 163
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 69 ETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIG 128
+T AL +LHS ++H DVK N+ L + K+ DFG V + T G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLV--------ELGTAGAG 213
Query: 129 TFVNLDPEY----VITGKLTEKSDVYSFGVLLAEL 159
DP Y ++ G +DV+S G+ + E+
Sbjct: 214 EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 110
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 165
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 110
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 165
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
ELR++ + H+NV+ +L + P E + L H+ L N C ++
Sbjct: 71 ELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLT 123
Query: 68 AETAS--------ALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQ 119
+ L Y+HS+ IIH D+K +N+ ++++ + K+ D G + +D++
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDE 178
Query: 120 TAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG--LKPGS 167
T + T PE ++ + D++S G ++AELLTG L PG+
Sbjct: 179 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 108
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 163
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 109
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 164
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 112
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 167
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 166
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 166
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 113
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 168
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 210
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 110
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 165
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ +++H N+V ++ + LV+EF+ + D++ L++ + + +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLY 126
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ + + H I+H D+K N+L++ + K+ADFG + ++ T ++
Sbjct: 127 -QLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEV 180
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
T P+ ++ K S D++S G + AE++TG L PG
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 112
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 167
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYL 111
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 166
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLL------DDNYKAKVADFGSSVLISSDN 118
+I+ + LDY+H IIH D+K NVL+ ++ + K+AD G++
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG---LKPGSGMALASNE 175
++ T++ + PE ++ +D++S L+ EL+TG +P G + ++
Sbjct: 193 TNSIQTREYRS-----PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNG--TLFDHIH-DKSSQVLRNWKTCL 64
E+ ++ ++ HKN+V++ K LV+EF FD + D ++++++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF---- 106
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTT 124
+ L + HS ++H D+K N+L++ N + K+A+FG + +
Sbjct: 107 --LFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI--PVRCYS 159
Query: 125 KKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTGLKP 165
++ T P+ + KL S D++S G + AEL +P
Sbjct: 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 65 RIAAETASALDYLHSSASPPIIHGDVKSTNVLL------DDNYKAKVADFGSSVLISSDN 118
+I+ + LDY+H IIH D+K NVL+ ++ + K+AD G++
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 119 QTAMTTKKIGTFVNLDPEYVITGKLTEKSDVYSFGVLLAELLTG---LKPGSGMALASNE 175
++ T++ + PE ++ +D++S L+ EL+TG +P G + ++
Sbjct: 193 TNSIQTREYRS-----PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL--SMDLKKFMDASALTGIPLPLIKSYL 110
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 165
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ +++H N+V ++ + LV+EF+ + D++ L++ + + +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLY 126
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ + + H I+H D+K N+L++ + K+ADFG + ++ T ++
Sbjct: 127 -QLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEV 180
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPG 166
T P+ ++ K S D++S G + AE++TG L PG
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL--SMDLKKFMDASALTGIPLPLIKSYL 112
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 167
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRIA 67
E+ ++ ++NH N+VK+L LV+EF+ D S+
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD--LKTFMDASALTGIPLPLIKSYL 112
Query: 68 AETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKI 127
+ L + HS ++H D+K N+L++ K+ADFG + +T ++
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEV 167
Query: 128 GTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLT--GLKPG 166
T PE ++ K + D++S G + AE++T L PG
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGTLFDHIHDKSSQVLRNWKTCLRI- 66
E+ ++ ++ H+N+V++ LV+EF+ N D S+ + N L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN----DLKKYMDSRTVGNTPRGLELN 108
Query: 67 -----AAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTA 121
+ L + H + I+H D+K N+L++ + K+ DFG + T
Sbjct: 109 LVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165
Query: 122 MTTKKIGTFVNLDPEYVITGKLTEKS-DVYSFGVLLAELLTG--LKPGS 167
+ ++ T P+ ++ + S D++S G +LAE++TG L PG+
Sbjct: 166 --SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPL--------LVYEFVPNGTLFDHIHDKS---SQ 55
E++++ + H+NVV ++ C P LV++F HD + S
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSN 117
Query: 56 VLRNW--KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG--SS 111
VL + R+ + L Y+H + I+H D+K+ NVL+ + K+ADFG +
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 112 VLISSDNQTAMTTKKIGTFVNLDPEYVITGK-LTEKSDVYSFGVLLAELLT 161
++ ++Q ++ T PE ++ + D++ G ++AE+ T
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 8 ELRVVSQINHKNVVKILGACLETKVPL--------LVYEFVPNGTLFDHIHDKS---SQV 56
E++++ + H+NVV ++ C P LV++F HD + S V
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNV 117
Query: 57 LRNW--KTCLRIAAETASALDYLHSSASPPIIHGDVKSTNVLLDDNYKAKVADFG--SSV 112
L + R+ + L Y+H + I+H D+K+ NVL+ + K+ADFG +
Sbjct: 118 LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 113 LISSDNQTAMTTKKIGTFVNLDPEYVITGK-LTEKSDVYSFGVLLAELLT 161
++ ++Q ++ T PE ++ + D++ G ++AE+ T
Sbjct: 175 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 42/178 (23%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGT---------LFDHIHDKSSQVL 57
EL+++ +++H N+V+ L Y F +G + D++ + +V
Sbjct: 62 RELQIMRKLDHCNIVR------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 58 RNW---KTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLD-DNYKAKVAD 107
R++ K L + + +L Y+HS I H D+K N+LLD D K+ D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 108 FGSS--VLISSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG 162
FGS+ ++ N + + ++ PE + T DV+S G +LAELL G
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRA-----PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 42/178 (23%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGT---------LFDHIHDKSSQVL 57
EL+++ +++H N+V+ L Y F +G + D++ + +V
Sbjct: 66 RELQIMRKLDHCNIVR------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 113
Query: 58 RNW---KTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLD-DNYKAKVAD 107
R++ K L + + +L Y+HS I H D+K N+LLD D K+ D
Sbjct: 114 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 170
Query: 108 FGSS--VLISSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG 162
FGS+ ++ N + + ++ PE + T DV+S G +LAELL G
Sbjct: 171 FGSAKQLVRGEPNVSXICSRYYRA-----PELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 42/178 (23%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGT---------LFDHIHDKSSQVL 57
EL+++ +++H N+V+ L Y F +G + D++ + +V
Sbjct: 62 RELQIMRKLDHCNIVR------------LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVA 109
Query: 58 RNW---KTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLD-DNYKAKVAD 107
R++ K L + + +L Y+HS I H D+K N+LLD D K+ D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 108 FGSS--VLISSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG 162
FGS+ ++ N + + ++ PE + T DV+S G +LAELL G
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRA-----PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 87 HGDVKSTNVLLDDNYKAKVADFGSSVLISSDNQTAMTTKKIGTFVNLDPEYVITGKLTEK 146
H DVK N+L+ + A + DFG + ++D + +GT PE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 147 SDVYSFGVLLAELLTGLKPGSGMALA 172
+D+Y+ +L E LTG P G L+
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLS 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 42/178 (23%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGT---------LFDHIHDKSSQVL 57
EL+++ +++H N+V+ L Y F +G + D++ + +V
Sbjct: 62 RELQIMRKLDHCNIVR------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 58 RNW---KTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLD-DNYKAKVAD 107
R++ K L + + +L Y+HS I H D+K N+LLD D K+ D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 108 FGSS--VLISSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG 162
FGS+ ++ N + + ++ PE + T DV+S G +LAELL G
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRA-----PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 42/178 (23%)
Query: 7 HELRVVSQINHKNVVKILGACLETKVPLLVYEFVPNGT---------LFDHIHDKSSQVL 57
EL+++ +++H N+V+ L Y F +G + D++ + +V
Sbjct: 63 RELQIMRKLDHCNIVR------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 110
Query: 58 RNW---KTCLRI------AAETASALDYLHSSASPPIIHGDVKSTNVLLD-DNYKAKVAD 107
R++ K L + + +L Y+HS I H D+K N+LLD D K+ D
Sbjct: 111 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 167
Query: 108 FGSS--VLISSDNQTAMTTKKIGTFVNLDPEYVITG-KLTEKSDVYSFGVLLAELLTG 162
FGS+ ++ N + + ++ PE + T DV+S G +LAELL G
Sbjct: 168 FGSAKQLVRGEPNVSXICSRYYRA-----PELIFGATDYTSSIDVWSAGCVLAELLLG 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,891,739
Number of Sequences: 62578
Number of extensions: 256847
Number of successful extensions: 3328
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 1073
Number of HSP's gapped (non-prelim): 1131
length of query: 259
length of database: 14,973,337
effective HSP length: 97
effective length of query: 162
effective length of database: 8,903,271
effective search space: 1442329902
effective search space used: 1442329902
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)