BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025012
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/258 (74%), Positives = 221/258 (85%), Gaps = 5/258 (1%)
Query: 1 MSVTCSGSFPDLLCGEDSGIFAGESSPACSSSDLESSASIEESIAGFIEDERNFVPGFDY 60
MSV+ S DL CGEDSG+F+GES+ SSS+++S +SIA FIEDER+FVPG DY
Sbjct: 12 MSVSFSNDM-DLFCGEDSGVFSGESTVDFSSSEVDSWPG--DSIACFIEDERHFVPGHDY 68
Query: 61 LTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQ 120
L+RFQT SLDASARE+SVAWILKVQAYYNF PLT+YL+VNYMDRFLY+RRLP+ +GWP Q
Sbjct: 69 LSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQ 128
Query: 121 LLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFS 180
LL+VACLSLAAKMEE +VPSL D QV G KY+FE KTI+RMELLVLSVLDWRLRSVTPF
Sbjct: 129 LLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFD 188
Query: 181 FIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEIPNL- 239
FI FFA K+DP+GTF+GF IS AT+IILSNI+EASFLEY PSSIAAAAILC ANE+P+L
Sbjct: 189 FISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLS 248
Query: 240 SLVNP-EHAESWCDGLSK 256
S+VNP E E+WCDGLSK
Sbjct: 249 SVVNPHESPETWCDGLSK 266
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 246 bits (629), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 138/258 (53%), Positives = 173/258 (67%), Gaps = 29/258 (11%)
Query: 12 LLCGEDSG--IF---------AGESSPACS--SSDLESSASIEESIAGFIEDERNFVPGF 58
LLC ED+G +F E CS +L S+ASI E I G E + P
Sbjct: 11 LLCAEDAGAAVFDVAVDISTCTTEDDECCSVGGEELYSAASIAELIGG----EAEYSPRS 66
Query: 59 DYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWP 118
DY R ++ S+D +AR ESV+WILKVQ Y FLPLT+YL+VNYMDRFL R LP+ GW
Sbjct: 67 DYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWA 126
Query: 119 WQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTP 178
QLL+VACLSLAAKMEET+VPSLLDLQVE ++Y+FE +TI RME L+L+ L+WRLRSVTP
Sbjct: 127 MQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTP 186
Query: 179 FSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEIPN 238
F+FI FFACK ++ A S+IQ FL++ PSS+AAAA+LCA E P+
Sbjct: 187 FTFIDFFACK-----HISNAMVQNAN----SDIQ---FLDHCPSSMAAAAVLCATGETPS 234
Query: 239 LSLVNPEHAESWCDGLSK 256
L+ VNPE A +WC GL++
Sbjct: 235 LAFVNPELAVNWCIGLAE 252
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 231 bits (588), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 153/212 (72%), Gaps = 4/212 (1%)
Query: 40 IEESIAGFIEDERNFVPGFDYLTRFQT-HSLDASAREESVAWILKVQAYYNFLPLTSYLS 98
+ E I G E ER+ P DY R ++ D +AR +SVAWILKV+ Y LP+T+YL+
Sbjct: 83 VAELIGG--EAERSHSPRADYPGRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLA 140
Query: 99 VNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTI 158
V+YMDRFL RLP NGW QLL+V CLSLAAKMEET+VPS+LDLQ+E A+YIFE +TI
Sbjct: 141 VSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTI 199
Query: 159 RRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLE 218
RMELLVL LDWRLRS+TPF+F+Y FA K+DP G + LI +AT++ L+ I + FL+
Sbjct: 200 FRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQVTLATIHDTEFLD 259
Query: 219 YRPSSIAAAAILCAANEIPNLSLVNPEHAESW 250
+ PSSIAAAA+LCA++EI L ++ SW
Sbjct: 260 HCPSSIAAAAVLCASSEIMQLVSIDHGTLVSW 291
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 137/185 (74%), Gaps = 5/185 (2%)
Query: 76 ESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEE 135
ESV+WILKV++ + F P T+YL+V+YMDRF+ SR LPD+ GW QLL VACLSLAAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPDH-GWASQLLCVACLSLAAKMEE 185
Query: 136 TVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTF 195
+ P LLDLQ+EG ++IFE +TI+RMEL+VL LDWRLRSVTPF+F+ FFACK+ +G
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS 245
Query: 196 MGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEIP----NLSLVNPEHAESWC 251
L RA +IILS I E FL + SS+AAAA+L A NE P + S V+ E A SWC
Sbjct: 246 SRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASWC 305
Query: 252 DGLSK 256
GL++
Sbjct: 306 IGLTE 310
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 144/243 (59%), Gaps = 15/243 (6%)
Query: 12 LLCGE----DSGIFAGESSPACSSSDLE-SSASIEESIAGFIEDERNFVPGFDYLTRFQT 66
LLC E D G+ E+ S + S + EE I +E E+ +P DY+ R ++
Sbjct: 10 LLCTESNVDDEGMIVDETPIEISIPQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRS 69
Query: 67 HSLDAS-AREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVA 125
LD + R +++ WI K + F PL L++NY+DRFL LP GW QLL+VA
Sbjct: 70 GDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVA 129
Query: 126 CLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF 185
CLSLAAK+EET VP L+DLQV +++FE K+++RMELLVL+ L WRLR++TP S+I +F
Sbjct: 130 CLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYF 189
Query: 186 -----ACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEIPNLS 240
C +P+ T LISR+ ++I S + FLE+RPS +AAA L + E+ +
Sbjct: 190 LRKMSKCDQEPSNT----LISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVH 245
Query: 241 LVN 243
N
Sbjct: 246 FDN 248
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
E+ I + E F PG DY+ R + LD S R +++ WILKV A+Y+F L LS+N
Sbjct: 64 EDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMN 123
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL S LP + W QLL+V+CLSLA+KMEET VP ++DLQVE K++FE KTI+R
Sbjct: 124 YLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKR 183
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYR 220
MELLV++ L+WRL+++TPFSFI +F K+ +G LI R+++ IL+ + FL++R
Sbjct: 184 MELLVVTTLNWRLQALTPFSFIDYFVDKI--SGHVSENLIYRSSRFILNTTKAIEFLDFR 241
Query: 221 PS 222
PS
Sbjct: 242 PS 243
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 177 bits (449), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 7/193 (3%)
Query: 40 IEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSV 99
+E+ + +E R +YLT+ ++ S R ++ WI KVQAYY+F PL +YL+V
Sbjct: 75 MEKEVEQMVETARG-----EYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAV 129
Query: 100 NYMDRFLYSRRLPDNNGWPW--QLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKT 157
NY+DRFL S N PW QLL VACLSLAAKMEET P LDLQV +Y+F+ +T
Sbjct: 130 NYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAET 189
Query: 158 IRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFL 217
I RME++VL+ L WR+++VTPF++I F K++ LISR T+IILS ++ FL
Sbjct: 190 IHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFL 249
Query: 218 EYRPSSIAAAAIL 230
+RPS IA A L
Sbjct: 250 RFRPSEIATAVAL 262
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHS--LDASAREESVAWILKVQAYYNFLPLTSYLS 98
EE +A +E E+ +P DY R + +D R E++ WI +V YYNF +T+YL+
Sbjct: 75 EECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLA 134
Query: 99 VNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTI 158
VNY+DRFL LP+ W QLLSVACLS+AAKMEETVVP LDLQ+ +++FE +TI
Sbjct: 135 VNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETI 194
Query: 159 RRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLE 218
RMELLVL+ L+WR+++VTPFS+I +F KL+ + R++++IL FLE
Sbjct: 195 HRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIAAGTGFLE 254
Query: 219 YRPSSI 224
+RPS I
Sbjct: 255 FRPSEI 260
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 122/184 (66%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
+E +A +E E + P YL + + L+ S R++++ WI KV +YYNF PL+ YL+VN
Sbjct: 62 DEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVN 121
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL S LP + W QLLSV+CLSLA KMEETVVP +DLQV A+Y+FE + I+R
Sbjct: 122 YLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKR 181
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYR 220
MEL+V+ L WRL++VTPFSFI +F K + L S + + + ++++ FL +R
Sbjct: 182 MELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTLASWCSDLTVGTLKDSRFLSFR 241
Query: 221 PSSI 224
PS I
Sbjct: 242 PSEI 245
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 170 bits (430), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 129/208 (62%), Gaps = 5/208 (2%)
Query: 22 AGESSPACSS-SDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHS----LDASAREE 76
AG P C + ++ + EE +A +E E + +P DY R + LD R +
Sbjct: 46 AGPPPPPCVDVAGVDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMD 105
Query: 77 SVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEET 136
++ WI KV +YY+F PLT+ L+VNY+DRFL +LPD W QLL+VACLSLAAKMEET
Sbjct: 106 AIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEET 165
Query: 137 VVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFM 196
VP LDLQV +Y+FE KTI+RMELLVLS L WR+++VTPFS++ +F +L+
Sbjct: 166 DVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPS 225
Query: 197 GFLISRATKIILSNIQEASFLEYRPSSI 224
G ++++IL + L +RPS I
Sbjct: 226 GRSALLSSELILCIARGTECLGFRPSEI 253
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
EE + IE ER P DYL R + LD + R +++ WI K F PL L++N
Sbjct: 36 EEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMN 95
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL LP W QLL+VACLSLAAK+EET VP L+ LQV ++FE K+++R
Sbjct: 96 YLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQR 155
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTF-MGFLISRATKIILSNIQEASFLEY 219
MELLVL+VL WRLR+VTP S++ +F K++ L++R+ ++I S + FLE+
Sbjct: 156 MELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEF 215
Query: 220 RPSSIAAAAILCAANE 235
R S IAAA L + E
Sbjct: 216 RASEIAAAVALSVSGE 231
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 119/189 (62%), Gaps = 3/189 (1%)
Query: 50 DERNFVPGFDYLTRF--QTHSLD-ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFL 106
+E+ +P YL R Q LD + R +++ WI KV Y F PLT+ LSVNY+DRFL
Sbjct: 63 EEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFL 122
Query: 107 YSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVL 166
LP QLL+VA LSLAAKMEETVVP LDLQV AKY+FET+TI+RMEL VL
Sbjct: 123 SVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVL 182
Query: 167 SVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAA 226
+ L WR+++VT SFI ++ K + T +SR+ +ILS + A FL +RPS IAA
Sbjct: 183 NALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAA 242
Query: 227 AAILCAANE 235
+ L A E
Sbjct: 243 SVALVALEE 251
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 108/160 (67%)
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLA 130
++ R+E+V WIL+V A+Y F L + L++ Y+D+F+ S L + W QL+SVACLSLA
Sbjct: 84 STDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLA 143
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLD 190
AK+EET VP LLD QVE KY+FE KTI+RMELL+LS L+W++ +TP SF+ +L
Sbjct: 144 AKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLG 203
Query: 191 PTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAIL 230
+++ +++LS I ++ F+ Y PS +AAA ++
Sbjct: 204 LKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMM 243
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%)
Query: 74 REESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKM 133
RE+++ WI KV+++Y F LT+ L+VNY DRF+ SR+ + W QL ++ACLSLAAK+
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 134 EETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTG 193
EE VP LLD QVE A+Y+FE KTI+RMELLVLS LDWR+ VTP SF +
Sbjct: 146 EEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKS 205
Query: 194 TFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEI 236
+SR ++LS I ++ FL + PS +A A ++ ++
Sbjct: 206 HHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDL 248
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLA 130
S R+E++ W+L+V+++Y F LT+ L+VNY DRF+ S +L + W QL++VA LSLA
Sbjct: 93 VSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLA 152
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSF----IYFFA 186
AK+EE VP LLDLQVE A+Y+FE KTI+RMELL+LS L WR+ VTP SF I F
Sbjct: 153 AKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFG 212
Query: 187 CKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEI 236
K F + ++++S I + F+ Y PS +A A ++ E+
Sbjct: 213 SKWHQQLDF----CRKCERLLISVIADTRFMRYFPSVLATAIMILVFEEL 258
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 72 SAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAA 131
+AR V WI+K A + F T+Y++V Y+DRFL R + + W QLLSVACLSLAA
Sbjct: 98 NARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAA 157
Query: 132 KMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDP 191
K+EE P L + +++ +++ ++ RMELLVL+ L W++ + TPFS++ F K
Sbjct: 158 KVEERRPPRLPEFKLD----MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRH 213
Query: 192 TGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANE--IPNL 239
++ RA + I ++I+ S + Y+PS+IA AAIL A N+ PNL
Sbjct: 214 DER--KAIVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNL 261
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 8/190 (4%)
Query: 51 ERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRR 110
E +P Y ++ + S R ++++ I + ++ P +YL+VNY+DRFL S
Sbjct: 35 EFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFD-DPSLTYLAVNYLDRFLSSED 93
Query: 111 LPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLD 170
+P + W +L+S++C+SL+AKM + + S+ DL VEG F+ + I RME ++L L
Sbjct: 94 MPQSKPWILKLISLSCVSLSAKMRKPDM-SVSDLPVEGE--FFDAQMIERMENVILGALK 150
Query: 171 WRLRSVTPFSFIYF----FACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAA 226
WR+RSVTPFSF+ F F K + L S+ + + S + SFLE++PS IA
Sbjct: 151 WRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAG 210
Query: 227 AAILCAANEI 236
AA+L A+ E+
Sbjct: 211 AALLFASFEL 220
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 15/165 (9%)
Query: 73 AREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPW--QLLSVACLSLA 130
AR +V WIL+ + Y+ F T+YL++ Y DRF RR+ D PW +LLS+AC+S+A
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRV-DREAMPWAARLLSIACVSVA 157
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLD 190
AKMEE P+L + G + +F + +IRRMELLVLS L WR+ +VTPF F+ F+ +L
Sbjct: 158 AKMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLH 216
Query: 191 PTGTFMGFLIS-----------RATKIILSNIQEASFLEYRPSSI 224
A I + + S L+YRPS++
Sbjct: 217 RHHHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTV 261
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 35 ESSASIEESIAGFIEDERNFVPGF-------DYLT--------RFQT---HSLDASAREE 76
ES +S+ E IE P F DY+ RF+T + +S R
Sbjct: 15 ESESSLNEDDDETIERSDKQEPHFTTTIDDEDYVADLVLKENLRFETLPSKTTSSSDRLI 74
Query: 77 SVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSR--RLPDNNGWPWQLLSVACLSLAAKME 134
++ WIL + + F T+Y++++Y D FL+ R L + W +LLSVACLSLAAKME
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 135 ETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKL--DPT 192
E +VP L + ++F+ IR+ ELL+LS LDW++ +TPF + +F K+ D
Sbjct: 135 ERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNH 193
Query: 193 GTFMGFLISRATKIILSNIQEASFLEYRPSSIAA 226
++ R++ +L+ +E SF EYR +AA
Sbjct: 194 SVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAA 227
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPW--QLLSVACLS 128
A AR +V WIL+ + + F T+YL++ Y DRF RR D + PW +LL+VAC+S
Sbjct: 106 ALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCL-RRCIDRSVMPWAARLLAVACVS 164
Query: 129 LAAKMEETVVPSLLDLQ--VEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFA 186
LAAKMEE P+L + + V Y F IRRMELLVLS LDWR+ +VTPF ++ +
Sbjct: 165 LAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLS 224
Query: 187 CKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSS 223
+L G + +I S + AS L++RPS+
Sbjct: 225 SRLR-RHVGGGGGAGASAALIFSAAEAASVLDHRPST 260
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 5/164 (3%)
Query: 92 PLTSYLSVNYMDRFLYSRRLP-DNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAK 150
P +YL++NY+DR+L R+L + N W +LL+++CL+LAAKM+ S D+Q G +
Sbjct: 76 PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ-RGEE 134
Query: 151 YIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTG-TFMGFLISRATKII 207
++F+ I+RME +VL+ L+WR RSVTP +F+ FF AC P + + +RA ++
Sbjct: 135 FMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLL 194
Query: 208 LSNIQEASFLEYRPSSIAAAAILCAANEIPNLSLVNPEHAESWC 251
L E E+ PS AAAA+L AA E+ L+ E + C
Sbjct: 195 LRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAAC 238
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 14/159 (8%)
Query: 72 SAREESVAWILKVQAYYNFLPLTSYLSVNYMDR-FLYSRRLPDNNGWPWQLLSVACLSLA 130
SARE +V W L+ A F LT+ L+V Y+DR FL + W +L +VAC++LA
Sbjct: 76 SAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVALA 135
Query: 131 AKMEETVVPSLLDLQVEGAK-------YIFETKTIRRMELLVLSVLDWRLRSVTPFSFIY 183
AK+EET VP LLDLQ+ A+ Y+FE KT+RRMELLVLS L WR+ VTP S++
Sbjct: 136 AKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYLQ 195
Query: 184 FFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPS 222
GT + +L+ + + + +RPS
Sbjct: 196 PL------LGTAHAARLHHCDTALLALMPDWRWPRHRPS 228
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 2/193 (1%)
Query: 37 SASIEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSY 96
+A++EE+IA +E E F D F R + W+++ ++ N T +
Sbjct: 41 AATMEEAIAMDLEKELCFNNHGDKFVEFFVSKKLTDYRFHAFQWLIQTRSRLNLSYETVF 100
Query: 97 LSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETK 156
+ N DRF+Y + W +L++V LS+A+K E P L +L++EG ++F
Sbjct: 101 SAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVN 160
Query: 157 TIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASF 216
T+ +MEL++L L+WR+ +VT ++F K+ G M +++R T +L I +
Sbjct: 161 TVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHM--IMNRITNHLLDVICDLKM 218
Query: 217 LEYRPSSIAAAAI 229
L+Y PS +A AAI
Sbjct: 219 LQYPPSVVATAAI 231
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 94 TSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGA-KYI 152
T++ + NY+DRFL W +++SV CLSLA K++E +PSL DLQ+E A +
Sbjct: 105 TAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEEAMGHS 164
Query: 153 FETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQ 212
F TIR MEL +L L WRL VTPFSF+ +RA ++L ++
Sbjct: 165 FRASTIRDMELTLLKALRWRLACVTPFSFL----------PVTTTTTTTRA--LLLRSLL 212
Query: 213 EASFLEYRPSSIAAAAILCAAN--EIPNLSLVN 243
+ SFL + S +AA+A+ ++ + PN L+N
Sbjct: 213 DPSFLRFDASLLAASALTLSSTTPQHPNHLLLN 245
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 51 ERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRR 110
E N P DY+ R Q+ S++AS R + W+++V Y P T YL+VNY+DR+L
Sbjct: 190 EVNKRPALDYMERTQS-SINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNA 248
Query: 111 LPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR----MELLVL 166
+ N QLL V C+ +AAK EE VP QVE YI + +R ME VL
Sbjct: 249 I---NKQNLQLLGVTCMMIAAKYEEVCVP-----QVEDFCYITDNTYLRNELLEMESSVL 300
Query: 167 SVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQ--EASFLEYRPSSI 224
+ L + L + T F+ F + + L+S L+ + + + L Y PS +
Sbjct: 301 NYLKFELTTPTAKCFLRRFL-RAAQGRKEVPSLLSECLACYLTELSLLDYAMLRYAPSLV 359
Query: 225 AAAAILCA 232
AA+A+ A
Sbjct: 360 AASAVFLA 367
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 42 ESIAGFIED-ERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
+ I +++ E + P +Y+ R QT +++S R + W+++V Y +P T YLSV+
Sbjct: 167 QDIHNYLKKSEAKYRPKSNYM-RKQT-DINSSMRAILIDWLVEVSEEYKLIPQTLYLSVS 224
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL + QL+ AC+ +AAK EE P + + V + K + R
Sbjct: 225 YIDRFLSHMSVLRGK---LQLVGAACMLVAAKFEEIYPPEVAEF-VYITDDTYTAKQVLR 280
Query: 161 MELLVLSVLDWRLRSVTPFSFI--YFFACKLDPTGTFMGFLISRATKIILSNIQEASFLE 218
ME L+L L + L T F+ Y FA P + +L +++ L N + ++
Sbjct: 281 MEHLILKTLAFDLSVPTCRDFLSRYLFAANAKPESQ-LKYLAEYLSELTLINCDIS--VK 337
Query: 219 YRPSSIAAAAILCAANEIPN 238
Y PS IAA++I C AN + N
Sbjct: 338 YAPSMIAASSI-CVANHMLN 356
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 56 PGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNN 115
P D++ Q ++D S R + W+++V Y +P T YL+VNY+DR+L S+ + N
Sbjct: 101 PSTDFVETIQK-NIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVI---N 156
Query: 116 GWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYI----FETKTIRRMELLVLSVLDW 171
QLL VACL +A+K EE P QVE YI + + +ME VL L +
Sbjct: 157 RRKMQLLGVACLLIASKYEEICPP-----QVEELCYISDNTYTKDEVLKMEASVLKYLKF 211
Query: 172 RLRSVTPFSFIYFF-----ACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAA 226
+ + T F+ F C P + FL A I ++ E S + Y PS IAA
Sbjct: 212 EMTAPTTKCFLRRFLRAAQVCHEAPV-LHLEFL---ANYIAELSLLEYSLICYVPSLIAA 267
Query: 227 AAILCA 232
++I A
Sbjct: 268 SSIFLA 273
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 28 ACSSSDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAY 87
A S + L ++ +EE + E+E DY++ ++ R + W+++V
Sbjct: 143 ADSGNPLAATEYVEELYKFYRENEEMSCVQPDYMS--SQGDINEKMRAILIDWLIEVHHK 200
Query: 88 YNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVE 147
+ + T +L+VN +DRFL + +P QL+ V + LA K EE VP + DL V
Sbjct: 201 FELMDETLFLTVNIVDRFLEKQVVPRKK---LQLVGVTAMLLACKYEEVAVPVVEDL-VL 256
Query: 148 GAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLISRATK 205
+ + I ME L+L+ L + + TP+ F+ F A + D + F I +
Sbjct: 257 ISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLLSFFILELSL 316
Query: 206 IILSNIQEASFLEYRPSSIAAAAILCA 232
+ E L+YRPS +AAAA+ A
Sbjct: 317 V------EYQMLKYRPSLLAAAAVYTA 337
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 28 ACSSSDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAY 87
A S + L ++ +EE + E+E DY++ ++ R + W+++V
Sbjct: 143 ADSGNPLAATEYVEELYKFYRENEEMSCVQPDYMS--SQGDINEKMRAILIDWLIEVHHK 200
Query: 88 YNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVE 147
+ + T +L+VN +DRFL + +P QL+ V + LA K EE VP + DL V
Sbjct: 201 FELMDETLFLTVNIVDRFLEKQVVPRKK---LQLVGVTAMLLACKYEEVAVPVVEDL-VL 256
Query: 148 GAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLISRATK 205
+ + I ME L+L+ L + + TP+ F+ F A + D + F I +
Sbjct: 257 ISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLLSFFILELSL 316
Query: 206 IILSNIQEASFLEYRPSSIAAAAILCA 232
+ E L+YRPS +AAAA+ A
Sbjct: 317 V------EYQMLKYRPSLLAAAAVYTA 337
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
E E P D++ Q ++ S R + W+++V Y +P T YL+VNY+DR+L
Sbjct: 250 EAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSG 308
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELL 164
+ N QLL VAC+ +AAK EE P QVE YI + R ME
Sbjct: 309 NEI---NRQRLQLLGVACMLIAAKYEEICAP-----QVEEFCYITDNTYFRDEVLEMEAS 360
Query: 165 VLSVLDWRLRSVTPFSFIYFF-----ACKLDPTGTFMGFLISRATKIILSNIQEASFLEY 219
VL+ L + + + T F+ F DP + FL + ++ ++ E + L Y
Sbjct: 361 VLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDP-ALHLEFLANYVAEL---SLLEYNLLSY 416
Query: 220 RPSSIAAAAILCA 232
PS +AA+AI A
Sbjct: 417 PPSLVAASAIFLA 429
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 56 PGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNN 115
P DY+ R Q +++S R V W+++V Y +P T YL+VNY+DR+L + +
Sbjct: 211 PDVDYMERVQK-DVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVI---S 266
Query: 116 GWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELLVLSVLDW 171
QLL VAC+ +AAK EE P QVE YI + ++ ME VL+ L +
Sbjct: 267 RQKLQLLGVACMMIAAKYEEICAP-----QVEEFCYITDNTYLKDEVLDMESDVLNYLKF 321
Query: 172 RLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEY-----RPSSIAA 226
+ + T F+ F G L+ + + + I E S LEY PS +AA
Sbjct: 322 EMTAPTTKCFLRRFV--RAAHGVHEAPLMQ--LECMANYIAELSLLEYTMLSHSPSLVAA 377
Query: 227 AAILCA 232
+AI A
Sbjct: 378 SAIFLA 383
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
E E P D++ Q ++ S R + W+++V Y +P T YL+VNY+DR+L
Sbjct: 220 EAETRKRPSTDFMETIQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSG 278
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELL 164
+ N QLL VAC+ +AAK EE P QVE YI + R ME
Sbjct: 279 NEI---NRQRLQLLGVACMLIAAKYEEICAP-----QVEEFCYITDNTYFRDEVLEMEAS 330
Query: 165 VLSVLDWRLRSVTPFSFIYFF-----ACKLDPTGTFMGFLISRATKIILSNIQEASFLEY 219
VL+ L + + + T F+ F DP + FL + ++ ++ E + L Y
Sbjct: 331 VLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDP-ALHLEFLANYVAEL---SLLEYNLLSY 386
Query: 220 RPSSIAAAAILCA 232
PS +AA+AI A
Sbjct: 387 PPSLVAASAIFLA 399
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
E E P D++ Q ++ S R + W+++V Y +P T YL+VNY+DR+L
Sbjct: 233 EAETRKHPSTDFMETLQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSG 291
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELL 164
+ N QLL VAC+ +AAK +E P QVE YI + R ME
Sbjct: 292 NEI---NRQRLQLLGVACMLIAAKYKEICAP-----QVEEFCYITDNTYFRDEVLEMEAS 343
Query: 165 VLSVLDWRLRSVTPFSFIYFF-----ACKLDPTGTFMGFLISRATKIILSNIQEASFLEY 219
VL+ L + + + T F+ F DP + FL + ++ ++ E + L Y
Sbjct: 344 VLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDP-ALHLEFLANYVAEL---SLLEYNLLSY 399
Query: 220 RPSSIAAAAILCA 232
PS +AA+AI A
Sbjct: 400 PPSLVAASAIFLA 412
>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB6 PE=2 SV=2
Length = 380
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 49 EDERNFVPGFDYLTRFQT-HSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLY 107
E E +P +YL Q+ + L +S R + W+++V ++ LP T +L++N +DRFL
Sbjct: 130 EKEIQMLPTHNYLMDTQSPYHLKSSMRALLIDWLVEVHEKFHCLPETLFLAINLLDRFLS 189
Query: 108 SRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQ--VEGAKYIFETKTIRRMELLV 165
+ N QLL + CL +A K EE +P + + +GA + + IR+ EL V
Sbjct: 190 QNVVKLNK---LQLLCITCLFIACKFEEVKLPKITNFAYVTDGAATV---EGIRKAELFV 243
Query: 166 LSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIA 225
LS L + + P +FI ++ + + A I+ +I F+ +PS +A
Sbjct: 244 LSSLGYNISLPNPLNFIR----RISKADNYCIETRNMAKFIMEYSICCNKFIHLKPSYLA 299
Query: 226 AAAILCA 232
A ++ A
Sbjct: 300 AMSMYIA 306
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 44 IAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMD 103
+ ++ E N++P +Y Q + R+ W+L+V L++NY+D
Sbjct: 28 LQTMLKAEENYLPSPNYFKCVQKEIV-PKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLD 86
Query: 104 RFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR---- 159
RFL + QLL C+ LA+KM+ETV + L I+ ++R
Sbjct: 87 RFL---SVEPTKKTRLQLLGATCMFLASKMKETVPLTAEKL------CIYTDNSVRPGEL 137
Query: 160 -RMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQEASFLE 218
+MELL L+ L W L SVTP FI F KL + L A + + +F+
Sbjct: 138 LQMELLALNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDVNFIA 197
Query: 219 YRPSSIAAAAILCAAN 234
PS IAA ++ A
Sbjct: 198 SPPSMIAAGSVAAAVQ 213
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 23 GESSPACSSSDLESSASIEESIAGFIEDERNFVPGFDYLT----RFQTHSLDASAREES- 77
GE S D +S ++ E +IED + +YL + LD + R +
Sbjct: 50 GEMILDIDSCDANNSLAVVE----YIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAI 105
Query: 78 -VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEET 136
V W+++V ++ + T +L+VN +DRFL + + QL+ + + LA K EE
Sbjct: 106 LVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVAMLLACKYEEV 162
Query: 137 VVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGT 194
VP + DL + A + K I ME L+L+ L + + T + F+ F A + D
Sbjct: 163 SVPVVSDL-IHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLE 221
Query: 195 FMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCA 232
+ F + + + E L++ PS +AAAA+ A
Sbjct: 222 LVAFFLVDLSLV------EYEMLKFPPSLVAAAAVYTA 253
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 43 SIAGFIEDERNFVPGFDYLT----RFQTHSLDASAREES--VAWILKVQAYYNFLPLTSY 96
++ +IED + +YL + LD + R + V W+++V ++ + T +
Sbjct: 172 AVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLF 231
Query: 97 LSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETK 156
L+VN +DRFL + + QL+ + + LA K EE VP + DL + A + K
Sbjct: 232 LTVNLIDRFLAKQNVVRKK---LQLVGLVAMLLACKYEEVSVPVVSDL-IHIADRAYTRK 287
Query: 157 TIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLISRATKIILSNIQEA 214
I ME L+L+ L + + T + F+ F A + D + F + + LS + E
Sbjct: 288 DILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFL-----VDLS-LVEY 341
Query: 215 SFLEYRPSSIAAAAILCA 232
L++ PS +AAAA+ A
Sbjct: 342 EMLKFPPSLVAAAAVYTA 359
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 94/229 (41%), Gaps = 24/229 (10%)
Query: 11 DLLCGEDSGIFAGESSPACSSSDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHSLD 70
+LLC E I + L+ + + + ++ E P Y Q L
Sbjct: 2 ELLCCEVDTI---------GRAHLDRNLITDRVLQTMLKAEETSCPSMSYFKCVQKEIL- 51
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLA 130
+ R+ W+L+V L++NY+DRFL P W QLL C+ LA
Sbjct: 52 PNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVE--PLRKSW-LQLLGATCMFLA 108
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRR-----MELLVLSVLDWRLRSVTPFSFIYFF 185
+KM+ET+ + L I+ +IR MEL VL+ L W L SVTP FI F
Sbjct: 109 SKMKETIPLTAEKL------CIYTDNSIRPDELLIMELRVLNKLKWDLASVTPHDFIEHF 162
Query: 186 ACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAAN 234
K+ T + A + + +F+ PS IAA ++ A
Sbjct: 163 LNKMPLTEDTKQIIRKHAQTFVALCATDVNFISNPPSMIAAGSVAAAVQ 211
>sp|P07818|CCNB_ARBPU G2/mitotic-specific cyclin-B OS=Arbacia punctulata PE=2 SV=1
Length = 409
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 54 FVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPD 113
VP +YL R +T + R V W+++V ++ L T +L+V +DRFL +
Sbjct: 158 MVPA-NYLDRQETQ-ITGRMRLILVDWLVQVHLRFHLLQETLFLTVQLIDRFLAEHSVSK 215
Query: 114 NNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRL 173
QL+ V + +A+K EE P + D V + IR+ME+ +L L ++L
Sbjct: 216 GK---LQLVGVTAMFIASKYEEMYPPEINDF-VYITDNAYTKAQIRQMEIAMLKGLKYKL 271
Query: 174 RSVTPFSFIYF--FACKLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILC 231
F+ A +D + + T + E S ++Y PS IAAAAI
Sbjct: 272 GKPLCLHFLRRNSKAAGVDAQKHTLAKYLMEIT------LPEYSMVQYSPSEIAAAAIYL 325
Query: 232 AANEIPNLSLVNPEHAESWCDGLSKVS 258
+ ++L++PE SWC ++ S
Sbjct: 326 S------MTLLDPETHSSWCPKMTHYS 346
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W++ V + P T YL+VN +DRFL + +P QL+ ++ L ++AK EE
Sbjct: 201 VEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKE---LQLVGLSALLMSAKYEEIW 257
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTF 195
P + DL V+ A + + K I ME +LS L+W L T + F+ F A D
Sbjct: 258 PPQVEDL-VDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEKMEN 316
Query: 196 MGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCA 232
M ++ L + + + + PS +AA+AI A
Sbjct: 317 MVHYLAE-----LGVMHYDTMIMFSPSMVAASAIYAA 348
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 41 EESIAGFI-EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSV 99
+E I ++ E E P Y+ R + S R V W+++V Y T +L+V
Sbjct: 169 QEDIHTYLREMEVKCKPKVGYMKR--QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 226
Query: 100 NYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR 159
NY+DRFL S + QL+ A + LA+K EE P + + V + K +
Sbjct: 227 NYIDRFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAEF-VYITDDTYSKKQVL 282
Query: 160 RMELLVLSVLDWRLRSVTPFSFI--YFFA-----CKLDPTGTFMGFLISRATKIILSNIQ 212
RME LVL VL + L + T F+ YF CK++ F+G LS I
Sbjct: 283 RMEHLVLKVLAFDLAAPTVNQFLTQYFLHLQPANCKVESLAMFLGE---------LSLID 333
Query: 213 EASFLEYRPSSIAAAAILCA 232
+L+Y PS IA AA A
Sbjct: 334 ADPYLKYLPSLIAGAAFHLA 353
>sp|Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2
Length = 429
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 18/194 (9%)
Query: 47 FIEDERNFVPGFDYLT----RFQTHSLDASAREESV--AWILKVQAYYNFLPLTSYLSVN 100
+I D F F+ L+ + + D + R + W+++V + + T YL++N
Sbjct: 177 YIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGILIDWLIEVHYKFELMEETLYLTIN 236
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
+DRFL ++ QL+ V L LA K EE VP + DL + K + + +
Sbjct: 237 VIDRFLAVHQIVRKK---LQLVGVTALLLACKYEEVSVPVVDDLILISDK-AYSRREVLD 292
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLISRATKIILSNIQEASFLE 218
ME L+ + L + TP+ F+ F A + D + F +I + E LE
Sbjct: 293 MEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFF------MIELCLVEYEMLE 346
Query: 219 YRPSSIAAAAILCA 232
Y PS +AA+AI A
Sbjct: 347 YLPSKLAASAIYTA 360
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W+++V Y T +L+VNY+DRFL S + QL+ A + LA+K EE
Sbjct: 213 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLVGTAAMLLASKFEEIY 269
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI--YFFA-----CKLD 190
P + + V + K + RME LVL VL + L + T F+ YF CK++
Sbjct: 270 PPEVAEF-VYITDDTYTKKQVLRMEHLVLKVLAFDLAAPTINQFLTQYFLHQQPANCKVE 328
Query: 191 PTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCA 232
F+G LS I +L+Y PS IAAAA A
Sbjct: 329 SLAMFLGE---------LSLIDADPYLKYLPSVIAAAAFHLA 361
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 46 GFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRF 105
G + ER F + R H + R + V WIL V A F P T+ +++ Y DR
Sbjct: 82 GLLARERETHGSFVFDARAAHH---CAFRSQLVEWILDVCAGERFGPTTADVAIAYTDRV 138
Query: 106 LYSRRLPDNNGWPWQLLSVACLSLAAKMEET--VVPSLLDLQVEGAKYIFETKTIRRMEL 163
L +P + L+++ CL +A K EE VP++ L+ ++ + IR+MEL
Sbjct: 139 LSKTVVPKTS---LHLVALCCLHIAVKYEEIEERVPTMSKLR-SWTSNMYSPEIIRKMEL 194
Query: 164 LVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRAT---------------KIIL 208
VL L W L +TP F+ F L G G I ++
Sbjct: 195 AVLIELGWDLGVLTPAHFLESF-LALTNGGISDGDDIEHGDAYKERYREELRYFVCQLYS 253
Query: 209 SNIQEASFLEYRPSSIAAAAILCAANEIPNLSLVNPE 245
+Q+ S L PS IA+A I A + + +PE
Sbjct: 254 LCVQDTSLLNQPPSQIASAVIATARVHLGVKPMCSPE 290
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W+++V Y T +L+VNY+DRFL S + QL+ A + LA+K EE
Sbjct: 204 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLVGTAAMLLASKFEEIY 260
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI--YFFA-----CKLD 190
P + + V + K + RME LVL VL + L + T F+ YF CK++
Sbjct: 261 PPEVAEF-VYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFLNQYFLHQQPANCKVE 319
Query: 191 PTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCA 232
F+G LS I +L+Y PS IA AA A
Sbjct: 320 SLAMFLGE---------LSLIDADPYLKYLPSLIAGAAFHLA 352
>sp|P20248|CCNA2_HUMAN Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2
Length = 432
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W+++V Y T +L+VNY+DRFL S + QL+ A + LA+K EE
Sbjct: 215 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLVGTAAMLLASKFEEIY 271
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI--YFFA-----CKLD 190
P + + V + K + RME LVL VL + L + T F+ YF CK++
Sbjct: 272 PPEVAEF-VYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLHQQPANCKVE 330
Query: 191 PTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCA 232
F+G LS I +L+Y PS IA AA A
Sbjct: 331 SLAMFLGE---------LSLIDADPYLKYLPSVIAGAAFHLA 363
>sp|O93229|CCNB2_RANJA G2/mitotic-specific cyclin-B2 OS=Rana japonica GN=CCNB2 PE=2 SV=1
Length = 392
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W+++V + + FL T Y+ + MDRFL + P + G QL+ V L LA+K EE
Sbjct: 165 VDWLIQVNSRFQFLQETLYMGIAIMDRFLQVQ--PISRG-KLQLVGVTSLLLASKYEEMY 221
Query: 138 VPSLLDLQVEGAKYI----FETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDP 191
P + D YI + T IR ME+++L L + L P F+ AC D
Sbjct: 222 SPEVADF-----AYITDNAYTTSQIREMEMIILRELKFDLGRPLPLHFLRRASKACSADA 276
Query: 192 TGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEI 236
+ + T + + + + PS IAAAA LC A ++
Sbjct: 277 EQHTLAKYLMELTLV------DYEMVHFHPSEIAAAA-LCLAQKV 314
>sp|Q9FMH5|CCA31_ARATH Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1
Length = 355
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 56 PGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNN 115
P DY+ + Q + ++ R V W+++V Y L T YL+V+Y+DRFL L N
Sbjct: 104 PLVDYIEKIQ-KDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFL---SLKTVN 159
Query: 116 GWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRS 175
QLL V + +A+K EE P++ D + + I +ME +L L + L +
Sbjct: 160 KQRLQLLGVTSMLIASKYEEITPPNVDDF-CYITDNTYTKQEIVKMEADILLALQFELGN 218
Query: 176 VTPFSFIYFFAC----KLDPTGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILC 231
T +F+ F + + M FL S +++ + + Q FL PS++AA+A+
Sbjct: 219 PTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSELSMLDYQSVKFL---PSTVAASAVFL 275
Query: 232 A 232
A
Sbjct: 276 A 276
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W+++V Y T +L+VNY+DRFL S + QL+ A + LA+K EE
Sbjct: 179 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLVGTAAMLLASKFEEIY 235
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI--YFFA----CKLDP 191
P + + V + K + RME L+L VL + L + T F+ YF K++
Sbjct: 236 PPEVAEF-VYITDDTYNKKQVLRMEHLILKVLSFDLAAPTINQFLTQYFLHQQTNAKVES 294
Query: 192 TGTFMGFLISRATKIILSNIQEASFLEYRPSSIAAAAILCAANEIPNLSLVNPEHAESWC 251
++G L+ I +L+Y PS IAAAA A+ I ++W
Sbjct: 295 LSMYLGE---------LTLIDADPYLKYLPSVIAAAAFHLASYTIT---------GQTWP 336
Query: 252 DGLSKVS 258
+ L KV+
Sbjct: 337 ESLCKVT 343
>sp|P14785|CCNA_DROME G2/mitotic-specific cyclin-A OS=Drosophila melanogaster GN=CycA
PE=2 SV=3
Length = 491
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 47 FIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFL 106
F E E+ P Y+ R + + R + W+++V Y T YLSV Y+DRFL
Sbjct: 211 FRESEKKHRPKPLYMRR--QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFL 268
Query: 107 YSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETK------TIRR 160
+ + QL+ A + +AAK EE P E +++F T + R
Sbjct: 269 SQMAVVRSK---LQLVGTAAMYIAAKYEEIYPP-------EVGEFVFLTDDSYTKAQVLR 318
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFA--CKLDPTGTFMGFLISRATKIILSNIQEASFLE 218
ME ++L +L + L + T + FI +A C + +M IS LS ++ ++L+
Sbjct: 319 MEQVILKILSFDLCTPTAYVFINTYAVLCDMPEKLKYMTLYISE-----LSLMEGETYLQ 373
Query: 219 YRPSSIAAAAILCAAN 234
Y PS +++A++ A +
Sbjct: 374 YLPSLMSSASVALARH 389
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,646,549
Number of Sequences: 539616
Number of extensions: 3354496
Number of successful extensions: 8210
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 7894
Number of HSP's gapped (non-prelim): 236
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)