BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025013
(259 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 108/185 (58%)
Query: 75 LQFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGH 134
+ GG SW V LG +P P NLS LIS+FS +G + K +V L+G H
Sbjct: 110 VALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAH 169
Query: 135 TVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXX 194
T+G+A+CT+FR IYN+SNID ++A+SLQ CP G D L+ D TP FD
Sbjct: 170 TIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINL 229
Query: 195 XXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 254
HSDQ+LFNG S D V Y+ + + F DF MIKMGN+ PLTG++GQIR N
Sbjct: 230 RNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTN 289
Query: 255 CRKIN 259
CRK N
Sbjct: 290 CRKTN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 13/199 (6%)
Query: 70 VSLAQLQFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVA 129
VSLA GGPSW V LG IP P +LS + FSA GL+ ++VA
Sbjct: 110 VSLA----GGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVA 165
Query: 130 LAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQT 182
L+G HT G+ARC F ++N D ++++ +LQQ CP+ G+ + + NLD T
Sbjct: 166 LSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLST 225
Query: 183 PTCFDXXXXXXXXXXXXXXHSDQELFN--GNSADFLVKRYAASISVFFKDFARGMIKMGN 240
P FD SDQELF+ G+S +V +A++ ++FF+ FA+ MI MGN
Sbjct: 226 PDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGN 285
Query: 241 IKPLTGSAGQIRINCRKIN 259
I PLTGS G+IR++C+K+N
Sbjct: 286 ISPLTGSNGEIRLDCKKVN 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVG 137
GGPSW V LG IP PT LS + S FSA GL+ ++VAL+G HT G
Sbjct: 115 GGPSWTVDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFG 174
Query: 138 KARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXX 190
+A C F ++N D ++T+ +LQ+ CP++G + NLD TP FD
Sbjct: 175 RATCGVFSNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNY 234
Query: 191 XXXXXXXXXXXHSDQELFN--GNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSA 248
SDQELF+ G++ +V +A++ ++FF+ FA+ MI MGNI PLTGS+
Sbjct: 235 FTNLQSNNGLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSS 294
Query: 249 GQIRINCRKIN 259
G+IR++C+K N
Sbjct: 295 GEIRLDCKKTN 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 71 SLAQLQFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVAL 130
+A + GGP W V LG +P P NL+ L +SF+ QGL+ ++V L
Sbjct: 106 EIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTL 165
Query: 131 AGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTP 183
+GGHT G+ARC++F +YN SN ++T++ L+ RCP+ + L NLD TP
Sbjct: 166 SGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTP 225
Query: 184 TCFDXXXXXXXXXXXXXXHSDQELFNGNSADF--LVKRYAASISVFFKDFARGMIKMGNI 241
FD SDQELF+ AD +V ++++ + FF +F MIKMGNI
Sbjct: 226 DQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNI 285
Query: 242 KPLTGSAGQIRINCRKIN 259
LTG G+IR+ C +N
Sbjct: 286 GVLTGDEGEIRLQCNFVN 303
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 114 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 173
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C S +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 174 GKNQCRSIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 233
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 234 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 293
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 294 TQGQIRLNCRVVN 306
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 114 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 173
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L ++D +TPT FD
Sbjct: 174 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNK 233
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 234 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 293
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 294 TQGQIRLNCRVVN 306
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 113 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 172
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 173 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 232
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 233 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 292
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 293 TQGQIRLNCRVVN 305
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 114 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 173
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 174 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 233
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 234 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 293
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 294 TQGQIRLNCRVVN 306
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 114 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 173
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 174 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 233
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 234 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 293
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 294 TQGQIRLNCRVVN 306
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 113 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 172
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 173 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 232
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 233 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 292
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 293 TQGQIRLNCRVVN 305
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 113 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 172
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 173 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 232
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 233 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 292
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 293 TQGQIRLNCRVVN 305
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 113 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 172
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 173 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 232
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 233 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 292
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 293 TQGQIRLNCRVVN 305
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 114 GGPSWRVPLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 173
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 174 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 233
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 234 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 293
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 294 TQGQIRLNCRVVN 306
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGHT
Sbjct: 114 GGPSWRVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 173
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 174 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 233
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 234 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 293
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 294 TQGQIRLNCRVVN 306
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL GGHT
Sbjct: 113 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTF 172
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 173 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 232
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 233 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 292
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 293 TQGQIRLNCRVVN 305
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLK-NMVALAGGHTV 136
GGPSW+V LG +P P L L SF GL+ ++VAL+GGH+
Sbjct: 113 GGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSF 172
Query: 137 GKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXX 189
GK +C +YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 173 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNK 232
Query: 190 XXXXXXXXXXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG
Sbjct: 233 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG 292
Query: 247 SAGQIRINCRKIN 259
+ GQIR+NCR +N
Sbjct: 293 TQGQIRLNCRVVN 305
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVG 137
GGP W+V LG +P P L A+I+ F A L++ ++VAL+G HT G
Sbjct: 110 GGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFG 168
Query: 138 KARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXX 190
+A+C F ++N D+ ++TS +LQ CP GN N+ A LDR T FD
Sbjct: 169 QAKCAVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNY 228
Query: 191 XXXXXXXXXXXHSDQELFNG----NSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTG 246
SDQ LF+ N+ LV+ Y+ S S+FF+DF MI+MGNI G
Sbjct: 229 FKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NG 286
Query: 247 SAGQIRINCRKIN 259
++G++R NCR IN
Sbjct: 287 ASGEVRTNCRVIN 299
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 9/191 (4%)
Query: 78 GGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVG 137
G +++V G IP P N + LI+SF+ + L+ MV L+G H++G
Sbjct: 113 GNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIG 172
Query: 138 KARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGN--DNVLANLDRQTPTCFDX 188
A C+SF +YN D + S+A L+ CP + +LD TP+ D
Sbjct: 173 VAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDN 232
Query: 189 XXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSA 248
SDQ L + VK A +++ + FA+ M+KMG I+ LTG+
Sbjct: 233 MYYTGVQLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQ 292
Query: 249 GQIRINCRKIN 259
G+IR NC +N
Sbjct: 293 GEIRTNCSVVN 303
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 78 GGPSWKVRLGXXXXXX-XXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTV 136
GGP ++V LG +P P+SN+ +L++ GL ++V ++GGHT+
Sbjct: 122 GGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTI 181
Query: 137 GKARCTSFRGHIY--NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXX 194
G A C+SF ++ D I +F L++ CP +G D LD +TP FD
Sbjct: 182 GLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTV-LDVRTPNVFDNKYYIDL 240
Query: 195 XXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 254
SDQ+LF +V+R+A S FF+ F + KMG ++ T G++R N
Sbjct: 241 VNREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRN 300
Query: 255 C 255
C
Sbjct: 301 C 301
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GLS +++VAL+GGHT+G A + F G ++ I D S+ L G + L
Sbjct: 147 AMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTEL-----LTGEKDGL 201
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV++YAA VFF D+A
Sbjct: 202 LQLP-----------------------SDKALLTDSVFRPLVEKYAADEDVFFADYAEAH 238
Query: 236 IKMGNI 241
+K+ +
Sbjct: 239 LKLSEL 244
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 47/162 (29%)
Query: 106 PTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARC---------TSFR--------GHI 148
P S L F GL+ K +VAL+G HT+G++R T + G
Sbjct: 135 PPSPAQHLRDVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQS 194
Query: 149 YNDS--NIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQE 206
+ D S+ + +++ RR D ++ PT D
Sbjct: 195 WTAQWLKFDNSYFKDIKE---RRDEDLLV------LPT-------------------DAA 226
Query: 207 LFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSA 248
LF S ++YAA FFKD+A K+ N+ G A
Sbjct: 227 LFEDPSFKVYAEKYAADPEAFFKDYAEAHAKLSNLGAKFGPA 268
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKA--RCTSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKEASGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 147 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 201
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 202 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 238
Query: 236 IKMGNI 241
K+ +
Sbjct: 239 QKLSEL 244
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 147 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 201
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 202 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 238
Query: 236 IKMGNI 241
K+ +
Sbjct: 239 QKLSEL 244
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 147 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 201
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 202 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 238
Query: 236 IKMGNI 241
K+ +
Sbjct: 239 QKLSEL 244
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 159 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 213
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 214 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 250
Query: 236 IKMGNI 241
K+ +
Sbjct: 251 QKLSEL 256
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 119 AQGLSLKNMVALAGGHTVGKARC--TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVL 175
A GL+ +++VAL+GGHT+G A + F G ++ I D S+ L G L
Sbjct: 147 AMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGL 201
Query: 176 ANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGM 235
L SD+ L + LV +YAA FF D+A
Sbjct: 202 LQLP-----------------------SDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 238
Query: 236 IKMGNI 241
K+ +
Sbjct: 239 QKLSEL 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.137 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,870,551
Number of Sequences: 62578
Number of extensions: 174070
Number of successful extensions: 577
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 480
Number of HSP's gapped (non-prelim): 45
length of query: 259
length of database: 14,973,337
effective HSP length: 97
effective length of query: 162
effective length of database: 8,903,271
effective search space: 1442329902
effective search space used: 1442329902
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (23.9 bits)