BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025014
(259 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255542538|ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548293|gb|EEF49784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 619
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/254 (68%), Positives = 199/254 (78%)
Query: 1 MAFLRRLLTNHALNRTVGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALPW 60
MA LRRL AL+RT + LL SSRSY S S E SQ I K H A PW
Sbjct: 1 MALLRRLQAIRALSRTAESRNPSCLLQSSRSYYSDFSNGLEFNSQRIFLSPYKGHNAFPW 60
Query: 61 TRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGALKVSISSPGFIYEPYAPRE 120
T GSTMT +SS + ++N+KR T Q +AP QARQMGALKVS+SSPGFIYEPYAPRE
Sbjct: 61 THGSTMTHQSSTPIELSTFVNDKRLLTTQARAPPQARQMGALKVSVSSPGFIYEPYAPRE 120
Query: 121 AIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMA 180
IPFWRRWFT+ GWRRTK+DIILELKSAYA++KLRKSGYSK + Y EA++LYKEI+T++A
Sbjct: 121 PIPFWRRWFTKSGWRRTKEDIILELKSAYAVSKLRKSGYSKHQLYKEAIELYKEISTMIA 180
Query: 181 NGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLN 240
NGDK SLRKAVTEKMYS LKNEIKQRESMWS V WEL+EP+IK+RTLRARLIGVDR+D +
Sbjct: 181 NGDKNSLRKAVTEKMYSELKNEIKQRESMWSKVYWELVEPVIKIRTLRARLIGVDRSDFS 240
Query: 241 KVFVQLTLEFLAKQ 254
KVF+QLTLE L KQ
Sbjct: 241 KVFIQLTLELLTKQ 254
>gi|388499100|gb|AFK37616.1| unknown [Lotus japonicus]
Length = 305
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/256 (61%), Positives = 191/256 (74%), Gaps = 3/256 (1%)
Query: 1 MAFLRRLLTNHALNRT--VGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGAL 58
M L+R L R+ +G S+YLLGS RSYS+ +S E ++ S L K H
Sbjct: 1 MMPLKRFHAVRTLYRSSQIGQDSSSYLLGSCRSYSNALSNGSEGNFKSFHSHLFKCHDGF 60
Query: 59 PWTRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGALKVSISSPGFIYEPYAP 118
P G T+TLRS++A + +++N+KR + Q K + +R +G ++S+SSPGFIYEPY P
Sbjct: 61 PLAGGKTLTLRSTMAAELSIFMNDKRMLSTQLKGSSLSRAVGT-QISVSSPGFIYEPYEP 119
Query: 119 REAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTL 178
RE IPFW+RWFTR GW+RTK D+ILELKSAYAI KLRKSGYSK +FY EA +YKEIN L
Sbjct: 120 REKIPFWQRWFTRSGWKRTKQDVILELKSAYAIQKLRKSGYSKSRFYNEAFKMYKEINAL 179
Query: 179 MANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRND 238
+ANGDK SLRKAVTEKMYSALKNEIKQRE+ W+ V WELIEP+I++RTLRARLIGVD D
Sbjct: 180 IANGDKKSLRKAVTEKMYSALKNEIKQRETTWNKVYWELIEPVIRVRTLRARLIGVDPKD 239
Query: 239 LNKVFVQLTLEFLAKQ 254
LNKVFVQLTLE AKQ
Sbjct: 240 LNKVFVQLTLEITAKQ 255
>gi|356576761|ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Glycine max]
Length = 309
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 194/255 (76%), Gaps = 2/255 (0%)
Query: 1 MAFLRRLLTNHALNRTVGVSESA-YLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALP 59
M +RL L R+ + ES+ YLLGS +SYSS +S E ++ S L K P
Sbjct: 2 MTPFKRLHLVRTLYRSSQIGESSSYLLGSCKSYSSALSNGSEGNFRSFHSHLLKGQDGFP 61
Query: 60 WTRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGALKVSISSPGFIYEPYAPR 119
+ ++TLRS++A + +++N +R + Q KA AQARQ+G ++S+SSPGFIYEPY PR
Sbjct: 62 FAGVKSLTLRSTMAAELSIFMNNRRMLSTQVKASAQARQVGQ-QISLSSPGFIYEPYEPR 120
Query: 120 EAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLM 179
+ IPFW+RWFTR G RRTK+DIILELKSAYAIAKLRK+GYSK +FY EA ++YKEINTL+
Sbjct: 121 DKIPFWKRWFTRSGLRRTKNDIILELKSAYAIAKLRKTGYSKNQFYNEAANMYKEINTLI 180
Query: 180 ANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDL 239
A GDK +LRKAVTE M+SALKNEIKQRE+ WS V WE++EP++K+RTLRARLIGVDR DL
Sbjct: 181 AKGDKRTLRKAVTENMFSALKNEIKQRETAWSRVYWEMVEPVVKIRTLRARLIGVDRKDL 240
Query: 240 NKVFVQLTLEFLAKQ 254
NK F+QLTLE LAKQ
Sbjct: 241 NKTFIQLTLEILAKQ 255
>gi|449485732|ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Cucumis sativus]
Length = 302
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/246 (63%), Positives = 185/246 (75%), Gaps = 2/246 (0%)
Query: 11 HALNRTVGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALPWTRGSTMTLRS 70
L RT + +GSS +YS G++ V ++ Q SS L H A RG M + S
Sbjct: 10 QTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLARGHKMIICS 69
Query: 71 SLAPKSLLYLNEK--RFATAQPKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRW 128
++A + L++ + R T Q KAP QARQ LKV++ SPGFIYEPY+PR+ +PFW+RW
Sbjct: 70 AVAAEFLVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSPRQQLPFWQRW 129
Query: 129 FTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLR 188
FTR GW+RTKDDIILELKSAYAIAKLRK GYSK+KFY EA +LY+EINTL+ANGDKTSLR
Sbjct: 130 FTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTLIANGDKTSLR 189
Query: 189 KAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTL 248
KAVTE MYSALKNEIK RES WS V WE+I P++K+RTLRARLIGVDR+DL KVFVQLTL
Sbjct: 190 KAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARLIGVDRSDLEKVFVQLTL 249
Query: 249 EFLAKQ 254
E LAKQ
Sbjct: 250 EILAKQ 255
>gi|449435699|ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211143 [Cucumis sativus]
Length = 302
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/253 (62%), Positives = 188/253 (74%), Gaps = 5/253 (1%)
Query: 4 LRRLLTNHALNRTVGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALPWTRG 63
LR L T L RT + +GSS +YS G++ V ++ Q SS L H A RG
Sbjct: 6 LRSLQT---LYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLARG 62
Query: 64 STMTLRSSLAPKSLLYLNEK--RFATAQPKAPAQARQMGALKVSISSPGFIYEPYAPREA 121
M + S++A + ++ + R T Q KAP QARQ LKV++ SPGFIYEPY+PR+
Sbjct: 63 HKMIICSAVAAEFSVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSPRQQ 122
Query: 122 IPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMAN 181
+PFW+RWFTR GW+RTKDDIILELKSAYAIAKLRK GYSK+KFY EA +LY+EINTL+AN
Sbjct: 123 LPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTLIAN 182
Query: 182 GDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNK 241
GDKTSLRKAVTE MYSALKNEIK RES WS V WE+I P++K+RTLRARLIGVDR+DL K
Sbjct: 183 GDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARLIGVDRSDLEK 242
Query: 242 VFVQLTLEFLAKQ 254
VFVQLTLE LAKQ
Sbjct: 243 VFVQLTLEILAKQ 255
>gi|186526131|ref|NP_001119286.1| Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein [Arabidopsis thaliana]
gi|332006297|gb|AED93680.1| Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein [Arabidopsis thaliana]
Length = 296
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/255 (57%), Positives = 187/255 (73%), Gaps = 7/255 (2%)
Query: 1 MAFLRRLLTNHALNRTVGVSESAYL-LGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALP 59
M+ +RR T +L +T G ES+ L G RSY S + VPE + ++ S L + H
Sbjct: 1 MSLVRRFQTVRSLLKTAGSRESSSLPFGCWRSYHSSLCHVPEAHGKSAYSRLYEGHSV-- 58
Query: 60 WTRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGALKVSISSPGFIYEPYAPR 119
+T LRS++ + L ++NEKR AT Q KAP Q ++ GA++VS+ SPGF+YEPYA R
Sbjct: 59 ----NTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALR 114
Query: 120 EAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLM 179
E I WRR FTR GWRRTK+D I EL+SAYAIAKLRK+GYSK FY EA++LYK+IN M
Sbjct: 115 EKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQM 174
Query: 180 ANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDL 239
ANG+K ++RK VTE+MYSALKNEIKQRE+MW V WE++EP++K+RTL+ARLIG+DR DL
Sbjct: 175 ANGEKKTIRKNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIRTLQARLIGIDRTDL 234
Query: 240 NKVFVQLTLEFLAKQ 254
K F+QLTLEFL KQ
Sbjct: 235 KKAFIQLTLEFLTKQ 249
>gi|297808779|ref|XP_002872273.1| protein translocase [Arabidopsis lyrata subsp. lyrata]
gi|297318110|gb|EFH48532.1| protein translocase [Arabidopsis lyrata subsp. lyrata]
Length = 314
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 189/272 (69%), Gaps = 23/272 (8%)
Query: 1 MAFLRRLLTNHALNRTVGVSESAYL------------------LGSSRSYSSGVSIVPEI 42
MA +RR T +L +T G ES+ L G RSY S + VPE
Sbjct: 1 MALVRRFQTVRSLLKTAGSRESSSLPFRNGNEFSLIQIGDDFRFGCWRSYHSSLYQVPEA 60
Query: 43 YSQNISSCLCKDHGALPWTRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGAL 102
+ +++ S L + H +T LRS++ +SL + N+KR AT Q KAP Q ++ GA+
Sbjct: 61 HGKSVYSRLYEGH-----NNANTHLLRSTMIAESLPFTNDKRSATTQVKAPPQLQKTGAV 115
Query: 103 KVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQ 162
+VS+ SPGF+YEPYA +E I WRR FTR GWRRTK+D I EL+SAYAIAKLRK+GYSK
Sbjct: 116 RVSMVSPGFVYEPYALQEKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKN 175
Query: 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPII 222
FY EA++LYK+IN LMANGDK ++RK VTE+MYSALKNEIKQRE+MW V WE+IEP++
Sbjct: 176 TFYIEALELYKQINILMANGDKKTIRKNVTERMYSALKNEIKQREAMWDGVYWEMIEPVV 235
Query: 223 KMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
K+RTL+ARLIG+DR DL K F+QLTLEFL KQ
Sbjct: 236 KIRTLQARLIGIDRTDLKKAFIQLTLEFLTKQ 267
>gi|145334561|ref|NP_001078626.1| Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein [Arabidopsis thaliana]
gi|26451284|dbj|BAC42743.1| unknown protein [Arabidopsis thaliana]
gi|332006296|gb|AED93679.1| Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein [Arabidopsis thaliana]
Length = 313
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 187/272 (68%), Gaps = 24/272 (8%)
Query: 1 MAFLRRLLTNHALNRTVGVSESAYL------------------LGSSRSYSSGVSIVPEI 42
M+ +RR T +L +T G ES+ L G RSY S + VPE
Sbjct: 1 MSLVRRFQTVRSLLKTAGSRESSSLPFRNGNEFSLIQIGDDFRFGCWRSYHSSLCHVPEA 60
Query: 43 YSQNISSCLCKDHGALPWTRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGAL 102
+ ++ S L + H +T LRS++ + L ++NEKR AT Q KAP Q ++ GA+
Sbjct: 61 HGKSAYSRLYEGHSV------NTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQKTGAV 114
Query: 103 KVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQ 162
+VS+ SPGF+YEPYA RE I WRR FTR GWRRTK+D I EL+SAYAIAKLRK+GYSK
Sbjct: 115 RVSMVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKN 174
Query: 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPII 222
FY EA++LYK+IN MANG+K ++RK VTE+MYSALKNEIKQRE+MW V WE++EP++
Sbjct: 175 TFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMWDGVYWEMVEPVV 234
Query: 223 KMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
K+RTL+ARLIG+DR DL K F+QLTLEFL KQ
Sbjct: 235 KIRTLQARLIGIDRTDLKKAFIQLTLEFLTKQ 266
>gi|224123246|ref|XP_002319031.1| predicted protein [Populus trichocarpa]
gi|222857407|gb|EEE94954.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 156/182 (85%), Gaps = 5/182 (2%)
Query: 78 LYLNEKRFATAQPKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRT 137
++LN+KR AT + AP QARQMG+LKVSISSPGFIYEPYAPR+ I FWRRWFT+ GWRRT
Sbjct: 5 IFLNDKRSATTKVNAPPQARQMGSLKVSISSPGFIYEPYAPRDTISFWRRWFTKSGWRRT 64
Query: 138 KDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYS 197
K+DIILELK+AYAI KLRK+GYSK KFY EA+ LYKEINTL+ANGDKT+LRKAVTEKMYS
Sbjct: 65 KNDIILELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEKMYS 124
Query: 198 ALKNEIKQRESMW--SSVNWELIEPIIKMRTLRARL---IGVDRNDLNKVFVQLTLEFLA 252
LKNEIKQR+S W S + WE+IEP + +RTLRARL IGVD++DLNKVF+QLTLE
Sbjct: 125 ELKNEIKQRQSAWNMSKLYWEMIEPAVLIRTLRARLATEIGVDKSDLNKVFIQLTLEIKT 184
Query: 253 KQ 254
KQ
Sbjct: 185 KQ 186
>gi|357441561|ref|XP_003591058.1| 39S ribosomal protein L45 [Medicago truncatula]
gi|355480106|gb|AES61309.1| 39S ribosomal protein L45 [Medicago truncatula]
gi|388515325|gb|AFK45724.1| unknown [Medicago truncatula]
Length = 294
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 184/253 (72%), Gaps = 13/253 (5%)
Query: 4 LRRLLTNHALNRTVGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALPWTRG 63
L+RL + L + + S +LLGS R+YS+ +S +++ K + +
Sbjct: 3 LKRLQSARNLYHSSQIRPS-HLLGSFRNYSNALSNASDLF---------KPNDGFSFANV 52
Query: 64 STMTLRSSLAPKSLLYLNEKRFATAQPKA--PAQARQMGALKVSISSPGFIYEPYAPREA 121
T+T RS++A + +++N+++ +T+ K AQ R MGA ++ +SSPG IYEPY PRE
Sbjct: 53 KTLTFRSTMAAEFSIFMNDRKMSTSAVKVRPNAQVRPMGA-QICLSSPGIIYEPYEPREK 111
Query: 122 IPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMAN 181
IPFW+R FTR GW RTK D+++E+K+AY IA+LRK+GYSK++FY EA+ +YK+INTL+AN
Sbjct: 112 IPFWKRMFTRSGWERTKSDLMMEVKNAYTIARLRKTGYSKKQFYLEAISMYKQINTLIAN 171
Query: 182 GDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNK 241
GDK SLRKAVTEKM+S LKNEIK RE+ WS V WE++EP++ +RTLRAR++GVD++D NK
Sbjct: 172 GDKHSLRKAVTEKMFSTLKNEIKVRETTWSRVYWEMVEPVVLIRTLRARMLGVDKSDTNK 231
Query: 242 VFVQLTLEFLAKQ 254
VF Q+TLE LAKQ
Sbjct: 232 VFYQITLEILAKQ 244
>gi|359487996|ref|XP_002284948.2| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Vitis
vinifera]
Length = 379
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/155 (76%), Positives = 138/155 (89%)
Query: 100 GALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGY 159
GALKVS+ SPG IYEPYAPRE I FW+RWFTR+GWRRTK+DI+LELKSAYA+AKLRK GY
Sbjct: 178 GALKVSMQSPGIIYEPYAPREPISFWKRWFTRNGWRRTKEDIVLELKSAYAVAKLRKIGY 237
Query: 160 SKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIE 219
S+QKFYTEAVDLYKEIN+ +AN K SLRK+VTE MYSALKNEIKQRES W V WE++E
Sbjct: 238 SRQKFYTEAVDLYKEINSQIANSAKASLRKSVTENMYSALKNEIKQRESKWHKVYWEMVE 297
Query: 220 PIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
P++K+RTLRAR+I +DRND+NK F+QLTLEFL KQ
Sbjct: 298 PVVKIRTLRARMISIDRNDMNKAFIQLTLEFLTKQ 332
>gi|298205045|emb|CBI34352.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/149 (75%), Positives = 132/149 (88%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFY 165
+ SPG IYEPYAPRE I FW+RWFTR+GWRRTK+DI+LELKSAYA+AKLRK GYS+QKFY
Sbjct: 1 MQSPGIIYEPYAPREPISFWKRWFTRNGWRRTKEDIVLELKSAYAVAKLRKIGYSRQKFY 60
Query: 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMR 225
TEAVDLYKEIN+ +AN K SLRK+VTE MYSALKNEIKQRES W V WE++EP++K+R
Sbjct: 61 TEAVDLYKEINSQIANSAKASLRKSVTENMYSALKNEIKQRESKWHKVYWEMVEPVVKIR 120
Query: 226 TLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
TLRAR+I +DRND+NK F+QLTLEFL KQ
Sbjct: 121 TLRARMISIDRNDMNKAFIQLTLEFLTKQ 149
>gi|226500730|ref|NP_001147017.1| LOC100280627 [Zea mays]
gi|194707278|gb|ACF87723.1| unknown [Zea mays]
gi|195606496|gb|ACG25078.1| tim44-like domain containing protein [Zea mays]
gi|414887907|tpg|DAA63921.1| TPA: Tim44-like domain containing protein [Zea mays]
Length = 303
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 153/181 (84%), Gaps = 4/181 (2%)
Query: 77 LLYLNEKR--FATAQPKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGW 134
++++N R A K P AR++G LKV++ SPGF+YEPY+PRE IPFW+RWFT GW
Sbjct: 77 VVHMNHARPMSTAAASKVPVGARKVG-LKVAMMSPGFVYEPYSPRERIPFWKRWFTLSGW 135
Query: 135 RRTKDDIILELKSAYAIAKLRK-SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTE 193
RRTK+DIILE+K+AYA+++LRK +GY+K +FY +A+ +YKE+NTLMA+GD +SLRK +TE
Sbjct: 136 RRTKEDIILEMKNAYAVSRLRKKTGYTKNQFYDQALKIYKEVNTLMAHGDTSSLRKILTE 195
Query: 194 KMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAK 253
+M+S +KNE+K+R+SMW+SV+WEL+EP + +RTLRAR+IG+D+NDL+K F+QLTLEF+ K
Sbjct: 196 RMHSTIKNELKRRQSMWNSVHWELVEPAVSIRTLRARMIGLDKNDLDKAFIQLTLEFVTK 255
Query: 254 Q 254
Q
Sbjct: 256 Q 256
>gi|219884429|gb|ACL52589.1| unknown [Zea mays]
Length = 303
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 153/181 (84%), Gaps = 4/181 (2%)
Query: 77 LLYLNEKR--FATAQPKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGW 134
++++N R A K P AR++G LKV++ SPGF+YEPY+PRE IPFW+RWFT GW
Sbjct: 77 VVHMNHARPMSTAAASKVPVGARKVG-LKVAMMSPGFVYEPYSPRERIPFWKRWFTLSGW 135
Query: 135 RRTKDDIILELKSAYAIAKLRK-SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTE 193
RRTK+DIILE+K+AYA+++LRK +GY+K +FY +A+ +YKE+NTLMA+GD +SLR+ +TE
Sbjct: 136 RRTKEDIILEMKNAYAVSRLRKKTGYTKNQFYDQALKIYKEVNTLMAHGDTSSLREILTE 195
Query: 194 KMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAK 253
+M+S +KNE+K+R+SMW+SV+WEL+EP + +RTLRAR+IG+D+NDL+K F+QLTLEF+ K
Sbjct: 196 RMHSTIKNELKRRQSMWNSVHWELVEPAVSIRTLRARMIGLDKNDLDKAFIQLTLEFVTK 255
Query: 254 Q 254
Q
Sbjct: 256 Q 256
>gi|218200130|gb|EEC82557.1| hypothetical protein OsI_27102 [Oryza sativa Indica Group]
gi|222637566|gb|EEE67698.1| hypothetical protein OsJ_25363 [Oryza sativa Japonica Group]
Length = 321
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 144/165 (87%), Gaps = 2/165 (1%)
Query: 91 KAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYA 150
K P AR++G +KV + SPGF+YEPY+ RE IPFW+RWFT GWRRTK+D+ILE+K+AYA
Sbjct: 111 KVPLGARKVG-MKVVMMSPGFVYEPYSIREPIPFWKRWFTPSGWRRTKEDVILEMKNAYA 169
Query: 151 IAKLRK-SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESM 209
+++LRK +GY+K++FY +A +YKE+NTLMA+GD +SLRK +TE+M+S +KNE+K+R+SM
Sbjct: 170 VSRLRKKTGYTKKEFYDQAFKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKKRQSM 229
Query: 210 WSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
WSSV+WEL+EP + +RTLRAR+IG+D+NDL+K F+QLTLEF+ KQ
Sbjct: 230 WSSVHWELVEPAVCIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQ 274
>gi|357121705|ref|XP_003562558.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Brachypodium distachyon]
Length = 324
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 140/163 (85%), Gaps = 2/163 (1%)
Query: 93 PAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIA 152
P AR++G +KV + SPGF+YEPY+ E I FWRRWFTR GW RTK+DIILE+K+AYA++
Sbjct: 116 PVGARKVG-MKVVMMSPGFVYEPYSLPEPISFWRRWFTRSGWTRTKEDIILEMKNAYAVS 174
Query: 153 KLRK-SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWS 211
+LRK +GY+K++FY +A ++YKE+NTLMA GD +SLRKA+TE+M+S +KNEIK+R+S W
Sbjct: 175 RLRKKTGYTKKQFYNQAFNIYKEVNTLMAQGDTSSLRKALTERMHSTMKNEIKRRQSKWK 234
Query: 212 SVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
SV+WEL+EP + +RTLRAR+IG+D+NDL+K F+QLTLEF+ KQ
Sbjct: 235 SVHWELVEPAVNIRTLRARMIGLDKNDLDKAFIQLTLEFITKQ 277
>gi|33146500|dbj|BAC79609.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50510250|dbj|BAD31456.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 353
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 144/194 (74%), Gaps = 31/194 (15%)
Query: 91 KAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWR------------------------ 126
K P AR++G +KV + SPGF+YEPY+ RE IPFW+
Sbjct: 111 KVPLGARKVG-MKVVMMSPGFVYEPYSIREPIPFWKSSLPFPNTDPSASFQDRIVRVSSF 169
Query: 127 -----RWFTRDGWRRTKDDIILELKSAYAIAKLRK-SGYSKQKFYTEAVDLYKEINTLMA 180
RWFT GWRRTK+D+ILE+K+AYA+++LRK +GY+K++FY +A +YKE+NTLMA
Sbjct: 170 KLNTKRWFTPSGWRRTKEDVILEMKNAYAVSRLRKKTGYTKKEFYDQAFKIYKEVNTLMA 229
Query: 181 NGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLN 240
+GD +SLRK +TE+M+S +KNE+K+R+SMWSSV+WEL+EP + +RTLRAR+IG+D+NDL+
Sbjct: 230 HGDTSSLRKILTERMHSTIKNELKKRQSMWSSVHWELVEPAVCIRTLRARMIGLDKNDLD 289
Query: 241 KVFVQLTLEFLAKQ 254
K F+QLTLEF+ KQ
Sbjct: 290 KAFIQLTLEFVTKQ 303
>gi|414887908|tpg|DAA63922.1| TPA: hypothetical protein ZEAMMB73_644873 [Zea mays]
Length = 194
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 116/129 (89%), Gaps = 1/129 (0%)
Query: 127 RWFTRDGWRRTKDDIILELKSAYAIAKLRK-SGYSKQKFYTEAVDLYKEINTLMANGDKT 185
RWFT GWRRTK+DIILE+K+AYA+++LRK +GY+K +FY +A+ +YKE+NTLMA+GD +
Sbjct: 19 RWFTLSGWRRTKEDIILEMKNAYAVSRLRKKTGYTKNQFYDQALKIYKEVNTLMAHGDTS 78
Query: 186 SLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQ 245
SLRK +TE+M+S +KNE+K+R+SMW+SV+WEL+EP + +RTLRAR+IG+D+NDL+K F+Q
Sbjct: 79 SLRKILTERMHSTIKNELKRRQSMWNSVHWELVEPAVSIRTLRARMIGLDKNDLDKAFIQ 138
Query: 246 LTLEFLAKQ 254
LTLEF+ KQ
Sbjct: 139 LTLEFVTKQ 147
>gi|148907785|gb|ABR17018.1| unknown [Picea sitchensis]
Length = 190
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Query: 112 IYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK-SGYSKQKFYTEAVD 170
I EPY E I F +R FTR GW+R+K+D+I E K+AYAIAKLRK + YSK KFY EA+
Sbjct: 2 ILEPYKRLEPISFLKRLFTRRGWKRSKEDLISEFKTAYAIAKLRKLTKYSKPKFYEEAIQ 61
Query: 171 LYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRAR 230
LYKEIN+ +A GD+TSLR+ VTE MY+ K EIKQRE+ WS V+WE+IEP +++RTLRAR
Sbjct: 62 LYKEINSHLAQGDRTSLRQLVTENMYTIFKREIKQRETTWSRVHWEMIEPTVRIRTLRAR 121
Query: 231 LIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
+I VD+N+L+ FVQ+TLE L Q Y
Sbjct: 122 MIAVDKNNLDNAFVQITLEILTNQKFAAY 150
>gi|255641370|gb|ACU20962.1| unknown [Glycine max]
Length = 181
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 101/113 (89%)
Query: 142 ILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKN 201
+L+LKSAYAIAKLRK+GYSK +FY EA ++YKEINTL+A GDK +LRKAVTE M+SALKN
Sbjct: 15 LLQLKSAYAIAKLRKTGYSKNQFYNEAANMYKEINTLIAKGDKRTLRKAVTENMFSALKN 74
Query: 202 EIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
EIKQRE+ WS V WE++EP++K+RTLRARLIGVDR DLNK F+QLTLE LAKQ
Sbjct: 75 EIKQRETAWSRVYWEMVEPVVKIRTLRARLIGVDRKDLNKTFIQLTLEILAKQ 127
>gi|242051094|ref|XP_002463291.1| hypothetical protein SORBIDRAFT_02g041340 [Sorghum bicolor]
gi|241926668|gb|EER99812.1| hypothetical protein SORBIDRAFT_02g041340 [Sorghum bicolor]
Length = 158
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 101/111 (90%), Gaps = 1/111 (0%)
Query: 145 LKSAYAIAKLRK-SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEI 203
+K+AYA+++LRK +GY+K++FY +A+ +YKE+NTLMA+GD +SLRK +TE+M+S +KNE+
Sbjct: 1 MKNAYAVSRLRKKTGYTKKQFYDQALKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNEL 60
Query: 204 KQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
K+R+SMW+SV+WEL+EP + +RTLRAR+IG+D+NDL+K F+QLTLEF+ KQ
Sbjct: 61 KRRQSMWNSVHWELVEPAVSIRTLRARMIGLDKNDLDKSFIQLTLEFVTKQ 111
>gi|302773644|ref|XP_002970239.1| hypothetical protein SELMODRAFT_441105 [Selaginella moellendorffii]
gi|300161755|gb|EFJ28369.1| hypothetical protein SELMODRAFT_441105 [Selaginella moellendorffii]
Length = 257
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 91 KAPAQARQMGALKVSISSPGFIYEPY-APREAIPFWRRWFTRDGWRRTKDDIILELKSAY 149
+ A ARQ+ + +SSPG I E Y P +PF++RWFTR GWR K ++ LK+AY
Sbjct: 45 RGLATARQV-KMDFYMSSPGLIAEKYRPPPPPLPFFQRWFTRQGWRLKKKYLMDMLKTAY 103
Query: 150 AIAKLRKS--GYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE 207
+AKLRK GY+++ FY EA DLYKEIN L A GD LR+ VTE +S +KN+IKQR+
Sbjct: 104 CLAKLRKKHKGYNQKVFYREATDLYKEINKLSAAGDLGKLRRLVTEHFFSVIKNQIKQRQ 163
Query: 208 SMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
+ +S V+WE++ I MRTL+ RLIG+DR DL+ FVQ+TL + Q+ Y
Sbjct: 164 AAYSRVHWEMVGQIKLMRTLQGRLIGIDRKDLDNAFVQITLRIQSNQIFAAY 215
>gi|302793266|ref|XP_002978398.1| hypothetical protein SELMODRAFT_418250 [Selaginella moellendorffii]
gi|300153747|gb|EFJ20384.1| hypothetical protein SELMODRAFT_418250 [Selaginella moellendorffii]
Length = 260
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 91 KAPAQARQMGALKVSISSPGFIYEPY-APREAIPFWRRWFTRDGWRRTKDDIILELKSAY 149
+ A ARQ+ + +SSPG I E Y P +PF++RWFTR GWR K ++ LK+AY
Sbjct: 48 RGLATARQV-KMDFYMSSPGLIAEKYRPPPPPLPFFQRWFTRQGWRLKKKYLMDMLKTAY 106
Query: 150 AIAKLRKS--GYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE 207
+AKLRK GY+++ FY EA DLYKEIN L A GD LR+ VTE +S +KN+IKQR+
Sbjct: 107 CLAKLRKKHKGYNQKVFYREATDLYKEINKLSAAGDLGKLRRLVTEHFFSVIKNQIKQRQ 166
Query: 208 SMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
+ +S V+WE++ I MRTL+ RLIG+DR DL+ FVQ+TL + Q+ Y
Sbjct: 167 AAYSRVHWEMVGQIKLMRTLQGRLIGIDRKDLDNAFVQITLRIQSNQIFAAY 218
>gi|147865818|emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]
Length = 489
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 76/87 (87%)
Query: 145 LKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIK 204
LKSAYA+AKLRK GYS+QKFYTEAVDLYKEIN+ +A K SLRK+VTE MYSALKNEIK
Sbjct: 379 LKSAYAVAKLRKIGYSRQKFYTEAVDLYKEINSQIATSAKASLRKSVTENMYSALKNEIK 438
Query: 205 QRESMWSSVNWELIEPIIKMRTLRARL 231
QRES W V WE++EP++K+RTLRAR+
Sbjct: 439 QRESKWHKVYWEMVEPVVKIRTLRARM 465
>gi|168056436|ref|XP_001780226.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668376|gb|EDQ54985.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 44/167 (26%)
Query: 102 LKVSISSPGFIYEP---------YAPREAI-----PFWRRWFTRDGWRRTKDDIILELKS 147
L+V + SPG I EP + R + F RWFT++GW
Sbjct: 173 LRVYMGSPGVIGEPWKPLPPPLPFLKRACVYSVLRDFGVRWFTKEGW------------- 219
Query: 148 AYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE 207
K+RK ++ IN +A GD+T+LR+ VT+ + +A+K E+K RE
Sbjct: 220 -----KIRKQ------------NIQGMINNALAAGDRTALRQLVTDNVLTAMKKELKHRE 262
Query: 208 SMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
W+ V+WEL+ P+ +RTL+ RLIG+D+ +++ F QLTL ++ Q
Sbjct: 263 LAWARVHWELVGPLKSIRTLQGRLIGIDQKNMDTAFAQLTLRIVSTQ 309
>gi|307109340|gb|EFN57578.1| hypothetical protein CHLNCDRAFT_51139 [Chlorella variabilis]
Length = 395
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 93 PAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIA 152
PA + +++S+ SP + EPY +FT GW+ + + KS Y +A
Sbjct: 92 PADMNKAMQMRLSMVSPNLLAEPYRGVPPPQPLTSYFTIRGWKERWQRTLSQFKSMYTLA 151
Query: 153 KLRK--SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRES-- 208
K +K G+++ F E+++LY++I L+A G++ SLR+ VT ++S +K ++KQRE
Sbjct: 152 KCKKYVPGFNRNAFKQESLELYRDICRLLAQGERGSLRQLVTPAVFSDMKRQLKQREDPA 211
Query: 209 -----MWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
+S WE + ++ T+ RLI ++ D F QLT+ + Q
Sbjct: 212 AGRACSGTSSGWEPT--VDELTTVHGRLIMINPKDETSGFAQLTVRIPSAQ 260
>gi|145349615|ref|XP_001419224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579455|gb|ABO97517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 221
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 100 GALKVSISSPGFIYEPYAPREAIPFWRRWFTRD-GWRRTKDDIILELKSAYAIAKLRKS- 157
G ++V+ +S I EPYA P W T GWR + K AYA++K K
Sbjct: 4 GGVRVAQTSSNLIAEPYAGPPRRPTLAEWATTSKGWRYAYEAATSRAKDAYALSKCAKEV 63
Query: 158 -GYSKQKFYTEAVDLYKEINTLMAN-GDKTSL----RKAVTEKMYSALKNEIKQRE-SMW 210
G++ + F EA +YK IN AN G +L R A T+K S LK E K RE W
Sbjct: 64 RGFTLEGFKQEAKQMYKMINASSANVGHGKTLEHETRHATTDKTQSDLKRERKSRERGGW 123
Query: 211 SSVNWELIEPIIKMRTLRARLIGVDRNDLNK-VFVQLTLEFLAKQVNCPY 259
+ V+W L E I + + +R RLI + ND N F QLT F KQ Y
Sbjct: 124 ARVDWNL-ESIDECQVVRGRLIMANANDSNGPGFAQLTTRFRGKQRFAAY 172
>gi|308807262|ref|XP_003080942.1| Putative mitochondrial/chloroplast ribosomal protein L45 (ISS)
[Ostreococcus tauri]
gi|116059403|emb|CAL55110.1| Putative mitochondrial/chloroplast ribosomal protein L45 (ISS)
[Ostreococcus tauri]
Length = 285
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 90 PKAPAQARQMGALKVSISSPGFIYEPYA-PREAIPFWRRWFTRDGWRRTKDDIILELKSA 148
P A + AR ++++ +S I EPYA P + T GWR D + + K A
Sbjct: 51 PSAASGARS--GIRLNRTSSNVIAEPYAGPLRRPTIVQALTTSLGWRYVVDSALGKAKDA 108
Query: 149 YAIAKLRKS--GYSKQKFYTEAVDLYKEINTLMANGDKT-----SLRKAVTEKMYSALKN 201
YA++K K G++ F EA LY+ IN A+ T R A T+KM S LK
Sbjct: 109 YALSKCTKEIKGFTLDGFKAEAKQLYRMINATSASTSGTRALSHETRHATTDKMQSDLKR 168
Query: 202 EIKQRE-SMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKV-FVQLTLEFLAKQVNCPY 259
E K RE W +++W L E I + + +R RLI + ND + FVQLT F ++Q Y
Sbjct: 169 ERKARELGGWGAIDWSL-EDIEECQVVRGRLIMANPNDTSGAGFVQLTTRFRSRQRFAAY 227
>gi|359487768|ref|XP_003633648.1| PREDICTED: uncharacterized protein LOC100852568 [Vitis vinifera]
Length = 108
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 1 MAFLRRLLTNHALNRTVGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALPW 60
MAF RL + H L RT + +YLLGSSRSYS VP+I +S K H LPW
Sbjct: 1 MAF-GRLRSIHNLYRTAEIRPFSYLLGSSRSYSIVTINVPKINCW-ATSYFYKGHNVLPW 58
Query: 61 TRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGA 101
T STMTL SS+ + + LN+ R T + KAPAQ RQMGA
Sbjct: 59 TCRSTMTLHSSMPTEPWILLNDARLLTTRAKAPAQVRQMGA 99
>gi|303278680|ref|XP_003058633.1| mitochondrial protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459793|gb|EEH57088.1| mitochondrial protein translocase family [Micromonas pusilla
CCMP1545]
Length = 335
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 96 ARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIA--- 152
A Q L++ + SP + +PY P A P R TR GW+R + + +A++
Sbjct: 88 AMQGKPLRMYMVSPDLLVDPYRPNRAWPSLRSLATRRGWKRLWRVVTRPMHELHALSMCT 147
Query: 153 KLRKSG-------YSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQ 205
K+ KSG ++K+ F A ++Y E+N L+A GD LR + S +K E K
Sbjct: 148 KMIKSGANGKSQAFTKEGFLDTAKEVYAEVNELIARGDHAKLRHLCSGSAASHVKREDKA 207
Query: 206 R-ESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
R + W V W+L+E + R L+ARL D + Q T++F ++ Y
Sbjct: 208 RSQGGWDRVEWKLLEHVQTPRVLQARLCS-PAGDPAVSWAQFTVQFKTRETFAAY 261
>gi|296088286|emb|CBI36731.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 1 MAFLRRLLTNHALNRTVGVSESAYLLGSSRSYSSGVSIVPEIYSQNISSCLCKDHGALPW 60
MAF RL + H L RT + +YLLGSSRSYS VP+I +S K H LPW
Sbjct: 1 MAF-GRLRSIHNLYRTAEIRPFSYLLGSSRSYSIVTINVPKINCW-ATSYFYKGHNVLPW 58
Query: 61 TRGSTMTLRSSLAPKSLLYLNEKRFATAQPKAPAQARQMGALKVSISSPGFIYEP 115
T STMTL SS+ + + LN+ R T + KAPAQ RQM + ++ +I P
Sbjct: 59 TCRSTMTLHSSMPTEPWILLNDARLLTTRAKAPAQVRQMVSYPFFLTDGKYIALP 113
>gi|255081604|ref|XP_002508024.1| mitochondrial protein translocase family [Micromonas sp. RCC299]
gi|226523300|gb|ACO69282.1| mitochondrial protein translocase family [Micromonas sp. RCC299]
Length = 341
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 96 ARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR 155
AR G L+ + SPG I +PY P + GW+ I + + + +
Sbjct: 115 ARSQG-LRAFLLSPGVIADPYRGPRPWPSLSSFLGTSGWKALVRMISRPVHDVLTLGQCQ 173
Query: 156 K-SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE-SMWSSV 213
+ G+++ F EA LY++I+ L+A TSLR VTEK + +K E K RE + W +
Sbjct: 174 QIKGFTRDNFKAEAGQLYRQISQLIAENHVTSLRHLVTEKALTDIKREAKTREKAGWGKI 233
Query: 214 NWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
WE I + K TL+ R+I + D F Q+T+ F + Q Y
Sbjct: 234 VWE-IRDLEKPVTLQGRMIFPNPQDKQMAFAQMTVGFRSHQRYAAY 278
>gi|384249758|gb|EIE23239.1| hypothetical protein COCSUDRAFT_47558 [Coccomyxa subellipsoidea
C-169]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 99 MGALKVSIS--SPGFIYEPYAPR-EAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR 155
MGA +V ++ SP I EPY +P W T G R ++ +K+ Y +A+ +
Sbjct: 17 MGASQVKLAPISPNVIAEPYKGELPPLPL-VAWVTPAGLREHWRRMLGGVKAMYTLARCK 75
Query: 156 K--SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQR-ESMWSS 212
K G+S F +A+ LY+E+ +A DKT LR+ +T Y +K ++K R E W
Sbjct: 76 KFVPGFSLPAFKADALRLYEEVCQAIAADDKTLLRQRMTPSAYGTVKAQLKAREEGGWKR 135
Query: 213 VNWELIE--PIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLA 252
V W L + ++ + ARLI + D F QLT+ A
Sbjct: 136 VAWALARRPQLHELELVHARLIAANPKDARSSFAQLTVRVRA 177
>gi|312385733|gb|EFR30159.1| hypothetical protein AND_00421 [Anopheles darlingi]
Length = 340
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
IS G ++EPY P E +R+G ++ + + + KS AI K+R + +
Sbjct: 101 ISCTGGVFEPYVPPEGDGRMSA-ISREGAKQAIEQLEKKTKSMMAIRKIRSYDEDFDARD 159
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F T+A D+Y + + M +K LR+ VTE+ Y L + + + ++ W+ I+ +
Sbjct: 160 FATQAQDIYIQAHQTMCEKNKYKLREIVTERAYPELMHNVADK-----TIRWQFIKSLEP 214
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
R + AR V + +F Q+T+ F ++Q+
Sbjct: 215 PRVVHARCTDVITKE--NIFAQVTVRFHSQQL 244
>gi|412993869|emb|CCO14380.1| predicted protein [Bathycoccus prasinos]
Length = 218
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 107 SSPGFIYEPYAPREAIPFWR----RWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQ 162
SS + EPY R +P R+ G + KD I K AI G+
Sbjct: 17 SSSNALAEPYRGRRKMPSSMTKIPRYLYDIGLNKAKD-IYCTSKVTSAI-----KGFDLN 70
Query: 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQR-ESMWSSVNWELIEPI 221
F +A LY+EI+ +AN + +S R+ V++K+ LK E K+R ++ WS + W L E
Sbjct: 71 MFKRDASILYEEISRAIANNNLSSCRRDVSDKVMQELKQEQKRRTKNGWSRIRWNLSEKG 130
Query: 222 IK-MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
++ + ++ R++ + DL F Q T+ F ++Q
Sbjct: 131 VENVSVVQGRMMATSQ-DLTNAFAQFTVRFESRQ 163
>gi|118782853|ref|XP_312541.3| AGAP002412-PA [Anopheles gambiae str. PEST]
gi|116129764|gb|EAA08051.3| AGAP002412-PA [Anopheles gambiae str. PEST]
Length = 335
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSKQK 163
IS G ++EPY P E +R+G ++ + + + KS AI K+R + +
Sbjct: 100 ISCTGGVFEPYIPPEGDGRMSA-ISREGAKQKIEQLEKKTKSMMAIRKIRNYDEDFEPPE 158
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F T A D+Y E + + +K LR+ VTE+ Y L + + + ++ W+ ++ +
Sbjct: 159 FATLAQDIYIEAHKTLCEKNKYKLREIVTERAYPELMHNVADK-----TIRWQFLKSLEP 213
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
R + AR V + +F Q+T+ F ++Q
Sbjct: 214 PRVVHARCTDVITKE--NIFAQVTVRFHSQQ 242
>gi|170042852|ref|XP_001849125.1| 39S ribosomal protein L45 [Culex quinquefasciatus]
gi|167866282|gb|EDS29665.1| 39S ribosomal protein L45 [Culex quinquefasciatus]
Length = 336
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
IS G ++EPY P E +++G ++ + + + KS AI K+R + +
Sbjct: 98 ISCTGGVFEPYIPPEGDGKMSA-VSKEGAKQKFEQLEKKTKSMMAIRKIRSYDDDFEPPE 156
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F A D+Y + + +A +K LR+ VTE+ Y L + + + +++W+ ++ +
Sbjct: 157 FAGYAQDIYIDTHNTLAAKNKYKLREIVTERAYPELIHNVSDK-----TIHWKFLKSLEP 211
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
R + AR V D +F Q+T+ F ++Q+
Sbjct: 212 PRVVHARCTDVISKD--NIFAQVTVRFHSQQI 241
>gi|195054150|ref|XP_001993989.1| GH22480 [Drosophila grimshawi]
gi|193895859|gb|EDV94725.1| GH22480 [Drosophila grimshawi]
Length = 353
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
IS G I+EPY P E + T G ++ + + + KS A+ K+R + +S +
Sbjct: 94 ISCTGGIFEPYVPPEG-DGKKSIITTSGAKQKFEFLEKKSKSMLAVRKIRSYEESFSSDE 152
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F + A D+Y +T MA +K +R+ VTE+ Y + + +K + +++W ++ +
Sbjct: 153 FGSYAQDIYISAHTHMAAKEKYKIREFVTERCYPEMMHNVKDK-----TIHWRFLQSLEP 207
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
R + AR V + F Q+T+ F +Q+
Sbjct: 208 PRLVHARCTEVITKE--NQFAQITVRFHTQQM 237
>gi|240849189|ref|NP_001155742.1| 39S ribosomal protein L45, mitochondrial [Acyrthosiphon pisum]
gi|239789330|dbj|BAH71295.1| ACYPI008057 [Acyrthosiphon pisum]
Length = 330
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDG--------WRRTKDDIILELKSAY-AIAKLRK 156
I++ G I EPY P E DG + K +++ + K + AI K+R+
Sbjct: 99 INNTGSIIEPYVPPEG----------DGKISPISTAGAKQKIELLKKKKDTWQAIRKIRQ 148
Query: 157 SGYSKQ---KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSV 213
+ + +F T+A D+Y + +T M N DK +L + VTEK Y + + I + ++
Sbjct: 149 NEEEFELYPEFITKAQDIYLKAHTTMVNKDKQNLLQYVTEKAYVEMLHNIDNK-----TL 203
Query: 214 NWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
W I+ I R + AR+ + D +F Q+T+ F KQ
Sbjct: 204 RWSFIKSIEPPRVVHARVTDIITQD--NLFAQITVRFHTKQ 242
>gi|157131210|ref|XP_001655824.1| mitochondrial ribosomal protein, L45, putative [Aedes aegypti]
gi|108871608|gb|EAT35833.1| AAEL012025-PA [Aedes aegypti]
Length = 334
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 18/186 (9%)
Query: 80 LNEKRFATAQPKAPAQARQMGALK--------VSISSPGFIYEPYAPREAIPFWRRWFTR 131
LNEK +Q + + ++ G L IS G ++EPY P E ++
Sbjct: 65 LNEKAEELSQEQMKTRMKERGILPPRPWMERPFYISCTGGVFEPYVPPEGDGKMSA-VSK 123
Query: 132 DGWRRTKDDIILELKSAYAIAKLR--KSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRK 189
+G ++ + + + KS A+ K+R + +F +A ++Y + + L+ +K LR+
Sbjct: 124 EGAKQKFELLEKKTKSMMAVRKIRSFDDDFEPPEFAAQAQEIYIQAHNLLMEKNKYKLRE 183
Query: 190 AVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLE 249
+TE+ Y + + + + ++ W+ ++ + R + AR V D +F Q+T+
Sbjct: 184 IITERAYPEMMHNVTDK-----TIRWKFLKSLEPPRVVHARCTDVISKD--NIFGQVTVR 236
Query: 250 FLAKQV 255
F +Q+
Sbjct: 237 FHTQQI 242
>gi|125773335|ref|XP_001357926.1| GA19976 [Drosophila pseudoobscura pseudoobscura]
gi|54637660|gb|EAL27062.1| GA19976 [Drosophila pseudoobscura pseudoobscura]
Length = 352
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
IS G I+E Y P E + + G ++ + + + KS A+ K+R +S +
Sbjct: 100 ISCTGGIFEAYVPPEGD-GKKSIISSSGAKQKLEFLEKKSKSLIAVRKIRSYDESFSSDQ 158
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F EA ++Y +TLMA +K +R+ V+E+ Y + + +K + +++W ++ +
Sbjct: 159 FGAEAQEIYVAAHTLMAAKEKYKIREYVSERCYPEMMHNVKDK-----TIHWRFLQSLEP 213
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
R + AR V + F Q+T+ F +Q+
Sbjct: 214 PRVVHARCTEVITKENQ--FAQVTVRFHTQQM 243
>gi|195158248|ref|XP_002020004.1| GL13752 [Drosophila persimilis]
gi|194116773|gb|EDW38816.1| GL13752 [Drosophila persimilis]
Length = 352
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
IS G I+E Y P E + + G ++ + + + KS A+ K+R +S +
Sbjct: 100 ISCTGGIFEAYVPPEGD-GKKSIISSSGAKQKLEFLEKKSKSLIAVRKIRSYDESFSSDQ 158
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F EA ++Y +TLMA +K +R+ V+E+ Y + + +K + +++W ++ +
Sbjct: 159 FGAEAQEIYVAAHTLMAAKEKYKIREYVSERCYPEMMHNVKDK-----TIHWRFLQSLEP 213
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
R + AR V + F Q+T+ F +Q+
Sbjct: 214 PRVVHARCTEVITKENQ--FAQVTVRFHTQQM 243
>gi|384493269|gb|EIE83760.1| hypothetical protein RO3G_08465 [Rhizopus delemar RA 99-880]
Length = 260
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 112 IYEPYAPREAIPF------WRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQKFY 165
++ Y P E P WR T+ WR K+ + L K + ++ QKF
Sbjct: 64 VFANYIPPETSPSVSDFSNWR--LTK--WRNLKNSVQNLLSVGIIKRKSQFEKWNSQKFL 119
Query: 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWE 216
EA + YK++N A GD+ L + + MYS LKN+IK R ++V WE
Sbjct: 120 AEAGETYKDMNDAFARGDRGMLEEVCLDAMYSNLKNQIKGR----NNVRWE 166
>gi|289740307|gb|ADD18901.1| mitochondrial ribosomal protein L45 [Glossina morsitans morsitans]
Length = 355
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRT-------KDDIILELKSA--YAIAKLR- 155
IS G I+EPY P E DG R + + LE KS A+ K+R
Sbjct: 97 ISCTGGIFEPYVPPEG----------DGKRSIISAAGAKQKFVFLEKKSKSMLAVRKIRN 146
Query: 156 -KSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVN 214
+ +S F A D+Y + MA DK LR+ VTE+ Y + + ++ + +++
Sbjct: 147 YEEDFSTDDFAAAAQDVYIGAHQTMALKDKHKLRELVTERCYPEIMHNVRDK-----TIH 201
Query: 215 WELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
W ++ + + AR+ V + +F Q+T+ F +Q+
Sbjct: 202 WSFLKSLEPPYVVHARVTDVISKE--NLFAQITVRFHTQQL 240
>gi|401828838|gb|AFQ22727.1| ribosomal protein L45, partial [Chrysomela populi]
Length = 325
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 106 ISSPGFIYEPYAPREAI----PFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGY 159
I S G ++EPY P E P ++ G ++ + + K+ AI K+R + +
Sbjct: 92 IHSTGGVFEPYVPPEGDGKISPV-----SKQGAMQSLQFLEKKSKTMMAIRKIRHFEEDF 146
Query: 160 SKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIE 219
+F EA LY +++ L+A DK +L VTE+ Y + + ++ + ++ W I+
Sbjct: 147 DSPEFCKEATKLYIKMHELLAARDKDNLIDVVTERAYPEVLHNVENK-----TIRWTYIK 201
Query: 220 PIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
I R ++AR + + VF Q+T+ F +Q
Sbjct: 202 DIELPRIVQARCTDIISKE--NVFAQVTVRFHTQQ 234
>gi|332374642|gb|AEE62462.1| unknown [Dendroctonus ponderosae]
Length = 325
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDG------WRRTKDDII-LELKS--AYAIAKLRK 156
ISS G I+EPY P E DG + K +++ LE KS A+ K+R+
Sbjct: 95 ISSSGDIFEPYVPPEG----------DGKVSPISAQGAKQNLVFLEKKSRTMLAVRKIRQ 144
Query: 157 --SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVN 214
+ +F A D+Y +++ MA DK +L +TE+ Y + + I + ++
Sbjct: 145 YDEDFDGPEFCKSATDIYIKMHECMAANDKETLINYITERAYPEVVHNIDNK-----TLR 199
Query: 215 WELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
W+ ++ I R + AR V D VF Q+T+ F +Q
Sbjct: 200 WKYLKDIELPRIVHARNTEVITPD--NVFAQVTVRFHTQQ 237
>gi|380017173|ref|XP_003692536.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Apis florea]
Length = 335
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 146 KSAYAIAKLR--KSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEI 203
KS A+ K++ + Y+ + F + +D+YK+ + ++ +K + K VTE Y + + I
Sbjct: 135 KSFMALRKIKGYEDNYTTKTFVEQTLDIYKKAHEVLCTQNKDEILKYVTETAYPIMMHNI 194
Query: 204 KQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
K + +W V E +EP R + AR+ V F Q+T+ F +Q+ C Y
Sbjct: 195 KNKTIIWKFV--ESLEP---ARLVHARVTSVITK--GNEFAQVTIRFHTQQILCIY 243
>gi|91086739|ref|XP_971533.1| PREDICTED: similar to GA19976-PA [Tribolium castaneum]
gi|270009728|gb|EFA06176.1| hypothetical protein TcasGA2_TC009023 [Tribolium castaneum]
Length = 319
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 106 ISSPGFIYEPYAPREAI----PFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGY 159
ISS G I+EPY P E P + G ++ + + K+ AI K+R + +
Sbjct: 88 ISSTGGIFEPYVPPEGDGKISPIHMQ-----GAKQKLQFLEKKSKTMMAIRKIRMFEEDF 142
Query: 160 SKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIE 219
F EA ++Y +++ LMA D ++ VTE+ Y + + ++ + +++W+LI+
Sbjct: 143 DTTAFCKEAENIYVKMHELMAKKDWDNITDYVTERAYPEVIHNVENK-----TIHWKLIK 197
Query: 220 PIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
I R + AR V + VF Q T+ F +Q+
Sbjct: 198 NIELPRVVHARCTDVITKE--NVFGQTTVRFHTQQM 231
>gi|345493995|ref|XP_003427198.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
isoform 1 [Nasonia vitripennis]
gi|345493997|ref|XP_003427199.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
isoform 2 [Nasonia vitripennis]
Length = 297
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 90 PKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAY 149
P+ P Q + + +S G I+EPY P E + T G +++ I + S
Sbjct: 78 PQKPWQEKPL-----YLSCTGSIFEPYVPPEGDGKFSAMST-SGAKQSMQFIQKKTTSYR 131
Query: 150 AIAKLRK--SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE 207
A+ K++K ++ F + D+Y+ + +AN +K L VTEK+Y + ++ +
Sbjct: 132 AVKKIKKYEEEFNVHDFTDQVNDIYRNAHEALANKEKDKLTDYVTEKLYPEMLYHLENK- 190
Query: 208 SMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
+ W+ I + R + AR + ND + F Q+T +Q
Sbjct: 191 ----IIKWKFIGSLEPTRVVHARCTNLVTNDNH--FAQVTARLHTQQT 232
>gi|383855866|ref|XP_003703431.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Megachile rotundata]
Length = 330
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
ISS I+E Y E + T G ++ + I + KS +I K+R +S +
Sbjct: 98 ISSTTQIFESYIVPEGDGKFSA-ITTSGAKQKVELIEKKSKSYLSIRKIRSYDDNFSTKT 156
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F EA ++YK+ + +AN D+ L + VTE Y + + +M ++ W+ +E +
Sbjct: 157 FGEEAFEIYKKAHEALANKDEDELLQYVTEHAYPMMTH-----NTMDKTIVWKFLESLEP 211
Query: 224 MRTLRAR---LIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
R + AR LI + F Q+T+ F +Q+ C Y
Sbjct: 212 PRIVHARNTSLISKENE-----FGQVTVRFHTQQILCIY 245
>gi|297607713|ref|NP_001060468.2| Os07g0647300 [Oryza sativa Japonica Group]
gi|255678018|dbj|BAF22382.2| Os07g0647300 [Oryza sativa Japonica Group]
Length = 172
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 227 LRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
L AR IG+D+NDL+K F+QLTLEF+ KQ+
Sbjct: 114 LGARKIGLDKNDLDKAFIQLTLEFVTKQL 142
>gi|66550524|ref|XP_625034.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial [Apis
mellifera]
Length = 332
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 107 SSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQKF 164
S+PG I+E Y E + T G ++ + I + KS A+ K++ + Y+ + F
Sbjct: 97 STPG-IFESYIVPEGDGKFSP-ITTTGAKQKIEFINKKSKSFIALRKIKGYEENYTTKTF 154
Query: 165 YTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKM 224
+ +D+YK+ + + K + K VTE Y + + IK + ++ W+ +E +
Sbjct: 155 LEQTLDIYKKAHEALCTQKKDEILKYVTETAYPIMIHNIKNK-----TIIWKFMESLEPA 209
Query: 225 RTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
R + AR+ + F Q+T+ F +Q+ C Y
Sbjct: 210 RLVHARVTSIVTQ--GNEFAQVTIRFHTQQILCIY 242
>gi|332029058|gb|EGI69072.1| Putative 39S ribosomal protein L45, mitochondrial [Acromyrmex
echinatior]
Length = 337
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
ISS I+E Y E + T++G ++ + KS AI K++ +
Sbjct: 100 ISSTSSIFESYVAPEGDGKYSV-ITKEGAKQKFTFFEKKSKSFMAIRKIKSFDDSFKTSF 158
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F EA+D+Y++ +A+ ++ + K VTE Y + + +M +++W+ +E +
Sbjct: 159 FLEEALDIYQKAYEALASKNEEEIIKYVTEMAYPKITH-----NTMNKTIHWKFLESLEP 213
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
R + AR V + VF QLT+ F +QV Y
Sbjct: 214 ARLVHARTTDVITKE--NVFAQLTVRFHTQQVLAIY 247
>gi|321469612|gb|EFX80592.1| hypothetical protein DAPPUDRAFT_303989 [Daphnia pulex]
Length = 327
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSK 161
V +S+ ++E Y P E T G +++ + + + KS A+ K++ + +S
Sbjct: 93 VFVSATSSVFEAYVPPEGDGKLSA-LTLGGAKQSMELLSKKSKSMMAVRKIKSFEEDFST 151
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPI 221
+ F EA ++Y + + +A D +L + VTE Y + ++++ +V W+ ++ +
Sbjct: 152 KYFPEEAQEIYLKAHKALAEKDDDTLHQCVTELCYPLMTDDLRS-----CTVRWQFLKSL 206
Query: 222 IKMRTLRARLIGVDRNDLNK--VFVQLTLEFLAKQVNCPY 259
R + AR V +NK +F Q+T+ F +Q Y
Sbjct: 207 EPPRVVHARCTEV----INKENIFSQVTVRFNTQQTLAVY 242
>gi|350414159|ref|XP_003490224.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Bombus impatiens]
Length = 338
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 146 KSAYAIAKLR--KSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEI 203
KS A+ K++ + YS F +++YK+ + + D+ + + VTE Y + + +
Sbjct: 138 KSFMALRKIKTYEDNYSSDTFRENLLNVYKKAHEALCRKDQDEILQYVTETAYPLMIHNV 197
Query: 204 KQRESMWSSVNWELIEPIIKMRTLRARLIG-VDRNDLNKVFVQLTLEFLAKQVNCPY 259
+ ++ W+ +E + R + AR+ + RN+L F Q+T+ F +Q+ C Y
Sbjct: 198 ANK-----TIVWKFLESLEPARIVHARVTSLISRNNL---FAQVTIRFHTQQLLCIY 246
>gi|307184938|gb|EFN71203.1| Probable 39S ribosomal protein L45, mitochondrial [Camponotus
floridanus]
Length = 201
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 145 LKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIK 204
+ S + K ++ Y F EA ++Y++ + +A K L K VTE Y + + +
Sbjct: 5 VNSVFTYGKFIQTSY----FLEEATEIYQKAHEALAAKKKGMLIKYVTESAYPKMIHNL- 59
Query: 205 QRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
M +++W+ +E + R + AR V + VF QLT+ F +Q+ Y
Sbjct: 60 ----MDKTIHWKFLESLEPARVVHARTTDVITKE--NVFAQLTVRFHTQQILAVY 108
>gi|39933380|ref|NP_945656.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris CGA009]
gi|39653005|emb|CAE25747.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 289
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 106 ISSPGFIYE--PYAPR-EAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQ 162
+S PG + + P AP + +P RW + + EL+ S + Q
Sbjct: 106 VSMPGTVIDQAPMAPNADVVPPSDRW-------KGIAEPDSELEHGLNAIAQNDSSFDAQ 158
Query: 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPII 222
F T A Y+ I ANGD+ SLR ++ ++Y + IK RE V +
Sbjct: 159 HFITGAKSAYEMIVMAFANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVETRFVS--- 215
Query: 223 KMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+A LI + D + LTL+F+++ ++
Sbjct: 216 ---IEKAELISAELRDRTAM---LTLKFVSQMISA 244
>gi|328767960|gb|EGF78008.1| hypothetical protein BATDEDRAFT_91206 [Batrachochytrium
dendrobatidis JAM81]
Length = 264
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 134 WRRTKDDIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTE 193
W R K ++L S Y + K G+ + F EA LY +N A GD+ L VT+
Sbjct: 92 WERIKK-LVLATWSVYQV-KTTTKGWKPRAFAIEAEKLYIAMNKAYARGDRAELSNCVTD 149
Query: 194 KMYSALKNEIK 204
M SAL EIK
Sbjct: 150 GMMSALSPEIK 160
>gi|397468478|ref|XP_003805907.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L45,
mitochondrial-like [Pan paniscus]
Length = 514
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSG--YSK 161
+ ++ I++ Y P E +++G ++ + + + S + I K+++ G +
Sbjct: 284 IHLACTAGIFDAYVPPEGDAHMPS-LSKEGLKQRTEKMKKNVASQFLIQKIKEGGDNFET 342
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEP- 220
+ F +A D++ E++ + N L VTE + + +IK + WS V E +EP
Sbjct: 343 KDFPEKAKDIFTEVHLCLNNSXHDXLHTLVTEHCFPDMIXDIKYKTIRWSFV--ESLEPH 400
Query: 221 -IIKMR 225
++++R
Sbjct: 401 HVVQVR 406
>gi|192288736|ref|YP_001989341.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
gi|192282485|gb|ACE98865.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris TIE-1]
Length = 235
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 106 ISSPGFIYE--PYAPR-EAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKSGYSKQ 162
+S PG + + P AP + +P RW + + EL+ S + Q
Sbjct: 52 VSMPGTVIDQAPMAPNADVVPPSDRW-------KGIAEPDSELEHGLNAIAQNDSSFDAQ 104
Query: 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPII 222
F T A Y+ I ANGD+ SLR ++ ++Y + IK RE V +
Sbjct: 105 HFITGAKSAYEMIVMAFANGDRRSLRDLLSSEVYESFDAAIKDREKNDLKVETRFVS--- 161
Query: 223 KMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+A LI + D + LTL+F+++ ++
Sbjct: 162 ---IEKAELISAELRDRTAM---LTLKFVSQMISA 190
>gi|449681483|ref|XP_002159080.2| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Hydra
magnipapillata]
Length = 275
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 90/230 (39%), Gaps = 22/230 (9%)
Query: 33 SSGVSIVPEIYSQNISSCLCKDHGALP---WTRGSTMTLRSSLAPKSLLYLNEKRFATAQ 89
S+G+S +P +S CLC + +TR ST + A L + K
Sbjct: 14 SAGLSSLP------VSQCLCPSVSSYIFKRYTRKSTSRFPAEDAVTRLEDMARKFQPPPY 67
Query: 90 PKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAY 149
K P +K + S G I+ Y P P + + R + I +
Sbjct: 68 SKNPLDTPADSGIK--LDSTGIIFVTYVP----PLKKEFIFSIKLVRNQMFINKLFTIFF 121
Query: 150 AIA----KLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQ 205
+I KL+ + ++ +F EA + ++NT + DK S + Y +K Q
Sbjct: 122 SIVNIKRKLKPAKFNTVEFAKEAQKRFIDVNTALQKNDKASEMIMIENATYMVVKTLQNQ 181
Query: 206 RESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
+ + W ++ + K R + A L V NDL + Q+T+ +Q+
Sbjct: 182 FTNPANKPYWRFVKEVEKPRVINAALSAVSENDL---YAQVTVRLHTEQI 228
>gi|260829205|ref|XP_002609552.1| hypothetical protein BRAFLDRAFT_285685 [Branchiostoma floridae]
gi|229294914|gb|EEN65562.1| hypothetical protein BRAFLDRAFT_285685 [Branchiostoma floridae]
Length = 349
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 37/169 (21%)
Query: 103 KVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRR--TKDDIILELKSAYAIA----KLRK 156
+V+IS + +PY P E DG + +K+ + L SA A+A +RK
Sbjct: 80 QVNISCTPEVMDPYIPPEG----------DGRQSVLSKEGAVQRLSSAKALATSQLSIRK 129
Query: 157 -----SGYSKQKFYTEAVDLYKEINTLMAN---GDKTSLRKAVTEKMYSALKNEIKQRES 208
+S + F A ++YKE N +AN ++ L + VTEK Y + K R
Sbjct: 130 IKEFDKEFSTKTFAGTAQEIYKEANNCLANFNTRNRHRLHQLVTEKCYPDMVRGFKFRTI 189
Query: 209 MWSSVNWELIEPIIKMRTLRARLIGVDRNDL---NKVFVQLTLEFLAKQ 254
W+ E +EP +++ V NDL V+ Q+T+ +Q
Sbjct: 190 RWTF--QESVEP--------PKVVHVRHNDLISKGNVYGQVTVRMHTRQ 228
>gi|339258422|ref|XP_003369397.1| zinc finger protein [Trichinella spiralis]
gi|316966353|gb|EFV50945.1| zinc finger protein [Trichinella spiralis]
Length = 763
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 89 QPKAPAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSA 148
QP P + R + ISS G I++ + P E + R D +++
Sbjct: 523 QPHRPWRER-----PIHISSSGTIFDEFVPDEN-ENKVSLLVKGKGSRLVDSSKHVWRNS 576
Query: 149 YAIAKLR--KSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQR 206
A K+R + + F EA+ +Y + ++ + N D L + VTE Y + E+ +
Sbjct: 577 RAGKKIRSYDADFDPVIFIDEALKIYLDAHSALQNRDSDRLHELVTEYAYPEMWEELNLK 636
Query: 207 ESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
S+ W+ +E + R ++ R V + D +F Q+T+ KQ
Sbjct: 637 -----SLRWQFVESVEPARVVQMRTSSVMQED--NIFAQVTVRMHTKQ 677
>gi|429767982|ref|ZP_19300160.1| Tim44-like domain protein [Brevundimonas diminuta 470-4]
gi|429189624|gb|EKY30449.1| Tim44-like domain protein [Brevundimonas diminuta 470-4]
Length = 205
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 145 LKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIK 204
L +A A K R + +F A Y+ I A GD+ +LR +T+K+ + + I
Sbjct: 60 LTAAIAGLKARDPNFDPHRFLEGARQAYETIVGAYAKGDREALRPLLTDKVMGSFEAGIA 119
Query: 205 QRESMWSSVNWELIEP 220
RE+ + + EL+ P
Sbjct: 120 AREARGDAESAELVHP 135
>gi|407781144|ref|ZP_11128364.1| hypothetical protein P24_02971 [Oceanibaculum indicum P24]
gi|407208570|gb|EKE78488.1| hypothetical protein P24_02971 [Oceanibaculum indicum P24]
Length = 224
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 153 KLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSS 212
KL + +++F A ++ I ANGDK +LR + +Y I RE+
Sbjct: 84 KLADGSFEEKQFANGARAAFEMIVQAFANGDKDTLRPLLANDVYDRFVGAIDAREA---- 139
Query: 213 VNWELIEPIIKMRTLRARLIGVDRNDLNKV-----FVQLTLEFLAKQVNC 257
+ TL RL+ ++ D+ + ++T+EF+++QVN
Sbjct: 140 ----------RKETLETRLLSLNAADITEAQMKGSVAEVTVEFVSEQVNL 179
>gi|154245991|ref|YP_001416949.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
gi|154160076|gb|ABS67292.1| import inner membrane translocase subunit Tim44 [Xanthobacter
autotrophicus Py2]
Length = 250
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 151 IAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMW 210
IA++ + + + F T A Y+ I T A GD+ +L+ + + +Y + I RES
Sbjct: 109 IARI-EPDFDARHFLTGARAAYEMIVTAFAAGDRRALKDLLAKDVYDGFVSAIADRES-- 165
Query: 211 SSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFV-----QLTLEFLAKQVNC 257
+ T+ +R + V++ +L V V QLT+ F++K ++
Sbjct: 166 ------------RRETMESRFVAVEQAELQDVTVRDRSAQLTVRFVSKLISV 205
>gi|432842976|ref|XP_004065531.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Oryzias
latipes]
Length = 315
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSK 161
++I+ +++PY P E +++G ++ + I S AI K+++ S +S
Sbjct: 81 INIACTAGVFDPYIPPEGDARLST-LSKEGLKQRTEQIRQSAASQLAIRKIKEHDSLFST 139
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPI 221
+ F +A +++ E + + +K L VTE+ Y + R + ++ W +E +
Sbjct: 140 KTFAEQAQEIFIEAHRALTQFNKEKLHSLVTERCYPEMT-----RGNRHKTIRWSFVESL 194
Query: 222 IKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
R + AR D ++ Q+T+ +KQ
Sbjct: 195 EPPRVVHARC--PDMVTKGNLYGQVTVRLHSKQ 225
>gi|298293768|ref|YP_003695707.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
gi|296930279|gb|ADH91088.1| import inner membrane translocase subunit Tim44 [Starkeya novella
DSM 506]
Length = 241
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 93 PAQARQMGALKVSISSPGFIYEPYAPREAI------PFWRRWFTRDGWRRTKDDIILELK 146
PA+A A KV +S PG +P P A P RW + E+
Sbjct: 43 PAKAPAGPADKV-VSFPGAAEKPSVPEPAEATESDEPAPARWAG-----------VAEVG 90
Query: 147 SAYAIA----KLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNE 202
SA A ++ G+ Q F T A Y+ I ANGD+ +L++ + +++
Sbjct: 91 SAVANGLDAIAAQERGFDAQHFLTGARAAYEMIVVAFANGDRAALKELLAREVFEGFSAA 150
Query: 203 IKQRESMWSSVNW--------ELIEPIIKMR----TLR--ARLIGVDRNDLNKV 242
I +RE + E+IE +K R TLR ++LI V R+ +V
Sbjct: 151 IAEREQRGEKMETQFVGIEKVEIIEAGVKGRSAQMTLRFLSQLISVTRDKAGRV 204
>gi|409441234|ref|ZP_11268229.1| Transcriptional regulator, LysR family [Rhizobium mesoamericanum
STM3625]
gi|408747529|emb|CCM79426.1| Transcriptional regulator, LysR family [Rhizobium mesoamericanum
STM3625]
Length = 309
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 37 SIVPEIYSQNISSCLCKDHGALPWTRGSTMTLRSSLAP----KSLLYLNEKRFATAQPKA 92
S +P++ +I L +H + G+ + +R P +++ +EK F A A
Sbjct: 114 SRLPKLEGDDIHLELVLEHRLADFGEGTDLAIRCGKGPWAGVRAVPLWHEKSFPIA---A 170
Query: 93 PAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDG 133
PA A ++GA SS F+ P I WRRWF DG
Sbjct: 171 PALAARIGA---DCSSQAFLTAPILHDSNIEGWRRWFAADG 208
>gi|340717667|ref|XP_003397301.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
[Bombus terrestris]
Length = 338
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 156 KSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNW 215
+ YS F +++YK+ + + D+ + + VTE Y L + ++ + ++ W
Sbjct: 150 EDNYSSDTFRENLLNIYKKAHEALCRKDQDEILQYVTETAYPLLIHNVENK-----TIVW 204
Query: 216 ELIEPIIKMRTLRARLIG-VDRNDLNKVFVQLTLEFLAKQVNCPY 259
+ +E + R + AR+ + +++L F Q+T+ F +Q+ C Y
Sbjct: 205 KFLESLEPARIVHARVTNLITKSNL---FAQVTIRFHTQQLLCIY 246
>gi|159483173|ref|XP_001699635.1| hypothetical protein CHLREDRAFT_141592 [Chlamydomonas reinhardtii]
gi|158281577|gb|EDP07331.1| predicted protein [Chlamydomonas reinhardtii]
Length = 311
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 146 KSAYAIAKLRKS--GYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEI 203
KS YA R S G+SK +D YK +N +A GD VTE+ L E+
Sbjct: 146 KSLYAGVLCRTSIWGFSKSALQQRVLDAYKAVNAALAAGDMALAEPYVTEQTGLRLAGEV 205
Query: 204 KQRESMWSSVNWELI-EP-IIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
+R SSV W ++ EP ++ + ++ F Q T ++QV Y
Sbjct: 206 ARRGR--SSVTWRMVREPKPSDIKLVHGTIVSNPLKQGKLHFAQWTARIPSRQVVAVY 261
>gi|344285951|ref|XP_003414723.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Loxodonta
africana]
Length = 306
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 47 ISSCLCKDHGALPWTRGSTMTLRS-SLAPKSLLYLNEKRFA--TAQPKAPAQ------AR 97
+ SCL + G W+R + +S ++ P +KRF T++P ++ AR
Sbjct: 8 VLSCLSRALGC--WSRQPALVAQSMTVVP----VRTKKRFTPPTSKPNYESEKEFIERAR 61
Query: 98 QMGAL--------KVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAY 149
+ G + + ++ G I++ Y P E F+R+G ++ + + S
Sbjct: 62 KAGLVIPPERLERAIHLACTGGIFDSYVPPEGDARMSS-FSREGMKQRTERFKKNVASQL 120
Query: 150 AIAKLRK--SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE 207
+I K+++ + + + F +A D+Y E + + N D L TE + + ++K +
Sbjct: 121 SIRKIKEYDANFKTKDFPEKAKDIYVEAHLCLNNSDHDRLHTLATELCFPDMVWDLKYKT 180
Query: 208 SMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQV 255
WS V E +EP ++ + L+ + V+ Q+T+ +Q+
Sbjct: 181 VRWSFV--ESLEPPQVVQVRCSNLV-----NQGNVYGQVTVRMHTRQI 221
>gi|354474802|ref|XP_003499619.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like
[Cricetulus griseus]
Length = 306
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query: 74 PKSLLYLNEKRFATAQPKAPAQARQMGAL--------KVSISSPGFIYEPYAPREAIPFW 125
P+ Y EK F AR+ G + + ++ I++PY P E
Sbjct: 45 PREPKYKTEKEFLE-------HARKAGLVIPPEKLERPIHLACTAGIFDPYVPPEGDARM 97
Query: 126 RRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSKQKFYTEAVDLYKEINTLMANGD 183
+++G + D + S A+ K+++ + + F EA D++ E + + N D
Sbjct: 98 SS-LSKEGLTQRTDRFKKNVASQLAVRKIKEFDPNFKTKDFAEEAKDIFIEAHLCLNNSD 156
Query: 184 KTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIG-VDRNDLNKV 242
L VTE + + ++K + +V W +E + + + R G V++++L
Sbjct: 157 HDRLHTLVTEHCFPDMVWDLK-----YKTVRWSFVESLEPAQVVHVRSSGLVNQSNL--- 208
Query: 243 FVQLTLEFLAKQ 254
+ Q+T+ +Q
Sbjct: 209 YGQVTVRLHTRQ 220
>gi|389613177|dbj|BAM19959.1| mitochondrial ribosomal protein L45, partial [Papilio xuthus]
Length = 157
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 179 MANGDKTSLRKAVTEKMYSALKNEIKQRESMWS-SVNWELIEPIIKMRTLRARLIGVDRN 237
+AN DK SLR VTEK Y R + W +++W+ +E + R + AR +
Sbjct: 4 IANHDKESLRLYVTEKAYPEF------RHNTWEKTIHWKFLESLEPPRVVHARCTDIVSK 57
Query: 238 DLNKVFVQLTLEFLAKQ 254
+ +F Q+T+ F +Q
Sbjct: 58 E--NIFGQVTVRFHTRQ 72
>gi|421595667|ref|ZP_16039658.1| hypothetical protein BCCGELA001_01383 [Bradyrhizobium sp.
CCGE-LA001]
gi|404272224|gb|EJZ35913.1| hypothetical protein BCCGELA001_01383 [Bradyrhizobium sp.
CCGE-LA001]
Length = 231
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 155 RKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVN 214
+ S + + F + A Y+ I ANGD+ +LR ++ ++Y + IK+RE
Sbjct: 93 KDSSFDPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVYESFDAAIKEREKNEQKTE 152
Query: 215 WELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+ +A L+G + D N QLT+ F+++ ++
Sbjct: 153 TRFVS------IDKAELVGAELRDRN---AQLTVRFVSQMISA 186
>gi|374571852|ref|ZP_09644948.1| hypothetical protein Bra471DRAFT_00235 [Bradyrhizobium sp. WSM471]
gi|374420173|gb|EHQ99705.1| hypothetical protein Bra471DRAFT_00235 [Bradyrhizobium sp. WSM471]
Length = 231
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 83 KRFATAQPKAPAQARQMGALKVSISSPGFIYE--PYAPR-EAIPFWRRW--FTRDGWRRT 137
+R +P A Q K ++ PG + + P AP E P RW T G
Sbjct: 25 QRTGNERPPFDRNALQGAQDKNVVTMPGKVIDQAPLAPTAEPTPPSDRWKGLTEPGTVLA 84
Query: 138 KD-DIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMY 196
+ D I+E + S + + F + A Y+ I ANGD+ +LR ++ ++Y
Sbjct: 85 QGLDAIVE----------KDSTFDPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVY 134
Query: 197 SALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVN 256
+ IK+RE + +A L+G + D QLT+ F+++ ++
Sbjct: 135 ESFDAAIKEREKNEQKTETRFVS------IDKAELVGAELRDRT---AQLTIRFVSQMIS 185
Query: 257 C 257
Sbjct: 186 A 186
>gi|326934094|ref|XP_003213130.1| PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Meleagris
gallopavo]
Length = 341
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 112 IYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRKS--GYSKQKFYTEAV 169
I +PY P E +++G ++ + + S A+ K++ +S + F A
Sbjct: 128 IIDPYVPPEGDARMTS-LSKEGLKQRMEKLKQTAASQLALRKVKDHDPNFSTKTFPEMAQ 186
Query: 170 DLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIKMRTLRA 229
++Y E + +AN +K L VTE+ Y + R + + ++ W +E + R +
Sbjct: 187 EIYVEAHNSLANFNKQKLHSLVTERCYPDMV-----RGNRYKTIRWSFVESLEPPRVVHV 241
Query: 230 RLIG-VDRNDLNKVFVQLTLEFLAKQ 254
R V+R +L + Q+T+ ++Q
Sbjct: 242 RCTSIVNRGNL---YGQVTVRMHSRQ 264
>gi|296202660|ref|XP_002748546.1| PREDICTED: 39S ribosomal protein L45, mitochondrial [Callithrix
jacchus]
Length = 329
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 104 VSISSPGFIYEPYAPREA---IPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SG 158
+ ++ I++ Y P E I F +R+G ++ + + + S AI K+++ +
Sbjct: 99 IHLACSAGIFDAYVPPEGDARISF----LSREGLKQKTERMKKTMASQVAIRKIKEHDAS 154
Query: 159 YSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELI 218
+ + F +A D++ E + + N D L VTE + + +IK + WS V E +
Sbjct: 155 FKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIKCKTVRWSFV--ESL 212
Query: 219 EP--IIKMR 225
EP ++++R
Sbjct: 213 EPSHVVQVR 221
>gi|408369245|ref|ZP_11167026.1| histidine kinase [Galbibacter sp. ck-I2-15]
gi|407744991|gb|EKF56557.1| histidine kinase [Galbibacter sp. ck-I2-15]
Length = 820
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 110 GFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILEL-------KSAYAIAKLRKSGYSKQ 162
GF+++PY+P + + DG +TK +E+ K + + LR S
Sbjct: 668 GFLFKPYSPEQLLQTISEALEEDGSFQTK---TIEIHQNQNQNKQEHQLFDLR----SLA 720
Query: 163 KFYTE--AVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEP 220
F + A+ E+ T+ + D SL+KA+ +K Y +++ + ++M+ +N + + P
Sbjct: 721 SFLEDELAIKNVLEVFTVNTHKDLKSLKKAIDKKDYQTVRDLGHKMQTMFKQINAQTVVP 780
Query: 221 II 222
++
Sbjct: 781 LL 782
>gi|316931716|ref|YP_004106698.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
gi|315599430|gb|ADU41965.1| import inner membrane translocase subunit Tim44 [Rhodopseudomonas
palustris DX-1]
Length = 258
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 94 AQARQMGALKVS---ISSPGFIYE--PYAPR-EAIPFWRRWFTRDGWRRTKDDIILELKS 147
A AR M + K IS PG + + P AP + +P RW + + EL+
Sbjct: 60 AAARDMISGKQDNNVISMPGTVIDQAPIAPNADVVPPSDRW-------KGIAEPDSELEH 112
Query: 148 AYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRE 207
S + + F A Y+ I ANGD+ SLR ++ ++Y + IK RE
Sbjct: 113 GLNAIAQHDSSFDARHFVDGAKSAYEMIVMAFANGDRRSLRDLLSSEVYESFDAAIKDRE 172
>gi|115920949|ref|XP_793386.2| PREDICTED: 39S ribosomal protein L45, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 338
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 93 PAQARQMGALKVSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIA 152
P Q Q A ++I+ G +EPY P E T +G ++ + + + A
Sbjct: 90 PGQQYQERA--ITITCTGDFFEPYIPPEG-DGKASSLTTEGAKQRLERVKNVGVTQMAQR 146
Query: 153 KLRK--SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMW 210
K+R+ ++ F +A +Y + + + + D+ L VTEK Y + + +
Sbjct: 147 KIRQFEPEFTTTDFAWKAQQIYVDAHNALQDFDRHLLHSLVTEKCYPEMIAGFR-----Y 201
Query: 211 SSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
++ W+++E I K R + R D + ++ Q+T+ F +Q
Sbjct: 202 KTIRWKMLESIEKPRIVHMRC--TDMINKGNIYGQVTVRFHTRQ 243
>gi|386399426|ref|ZP_10084204.1| hypothetical protein Bra1253DRAFT_05004 [Bradyrhizobium sp.
WSM1253]
gi|385740052|gb|EIG60248.1| hypothetical protein Bra1253DRAFT_05004 [Bradyrhizobium sp.
WSM1253]
Length = 231
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 83 KRFATAQPKAPAQARQMGALKVSISSPGFIYE--PYAPR-EAIPFWRRW--FTRDGWRRT 137
+R +P A Q K ++ PG + + P AP E P RW T G
Sbjct: 25 QRTGNERPPFDRNALQGAQDKNVVTMPGKVIDQAPLAPTAEPAPPSDRWKGLTEPGTVLA 84
Query: 138 KD-DIILELKSAYAIAKLRKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMY 196
+ D I+E + S + + F + A Y+ I ANGD+ +LR ++ ++Y
Sbjct: 85 QGLDSIVE----------KDSTFDPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVY 134
Query: 197 SALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVN 256
+ IK+RE + +A L+G + D QLT+ F+++ ++
Sbjct: 135 ESFDAAIKEREKNEQKTETRFVS------IDKAELVGAELRDRT---AQLTIRFVSQMIS 185
Query: 257 C 257
Sbjct: 186 A 186
>gi|12847837|dbj|BAB27727.1| unnamed protein product [Mus musculus]
Length = 284
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSK 161
+ ++ I++PY P E +++G + + + S AI K+R+ + +
Sbjct: 81 IHLACTAGIFDPYVPPEGDARMSS-LSKEGLTQRTERLRKNAASQLAIRKIREFEANFKT 139
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPI 221
+ F +A D++ E + + N D L VTE + + ++K + +V W +E +
Sbjct: 140 KDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMVWDLK-----YKTVRWGFVESL 194
Query: 222 IKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
+ + R G+ + + ++ Q+T+ +Q
Sbjct: 195 EPAQVVHVRCSGL--VNQSNMYGQVTVRLHTRQ 225
>gi|225707976|gb|ACO09834.1| 39S ribosomal protein L45, mitochondrial precursor [Osmerus mordax]
Length = 315
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSK 161
++I+ +++PY P E +++G ++ + I S A+ K+++ + ++
Sbjct: 81 INIACTAGVFDPYIPPEGDSRLSS-LSKEGLKQRTEQIRQSAASQLAVRKIKEHDTTFTT 139
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPI 221
++F A +Y E + + +K L VTE+ Y + R + + ++ W +E +
Sbjct: 140 KEFPGHAQGIYIEAHNALTQFNKEKLHSLVTERCYPEM-----TRANRYKTLRWTFVESL 194
Query: 222 IKMRTLRARLIG-VDRNDLNKVFVQLTLEFLAKQ 254
+ + AR V + +L + Q+TL ++Q
Sbjct: 195 EPPKVVHARCPEMVSKGNL---YGQVTLRIHSRQ 225
>gi|328872019|gb|EGG20389.1| hypothetical protein DFA_07513 [Dictyostelium fasciculatum]
Length = 310
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGW-------RRTKDDIILELKSAYAIAKLRK 156
+ I SPG I+EP P +P + T W RT I + +KS + L +
Sbjct: 106 IYIQSPGQIFEPNLP---VPLTKILVTPSSWIDTIRFYYRTYGSIGV-IKS--KLKALTQ 159
Query: 157 SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSAL------------KNEIK 204
++ + F +A +++ +N +AN D +++ T YS L KN +K
Sbjct: 160 DQFAVKSFVEQAKEIFINLNKAIANSDTDEVKELATIHYYSILAKNTQFDKVDGKKNNVK 219
Query: 205 QRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
S W+ EL +P KM +RA I + F Q+ +EF KQ
Sbjct: 220 ---SEWTC---ELDKP--KMLWIRAGQIRTTAAGGMEYFGQICVEFSGKQ 261
>gi|383768469|ref|YP_005447532.1| hypothetical protein S23_01940 [Bradyrhizobium sp. S23321]
gi|381356590|dbj|BAL73420.1| hypothetical protein S23_01940 [Bradyrhizobium sp. S23321]
Length = 235
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 106 ISSPGFIYE--PYAPR-EAIPFWRRW--FTRDGWRRTKD-DIILELKSAYAIAKLRKSGY 159
++ PG + + P AP E P RW T G + D I+E + S +
Sbjct: 52 VTMPGKVIDQAPLAPTAEPAPPSDRWKGLTEPGTTLAQGLDAIVE----------KDSTF 101
Query: 160 SKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIE 219
+ F + A Y+ I ANGD+ +LR ++ ++Y + IK+RE +
Sbjct: 102 DPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVYESFDAAIKEREKNEQKTETRFVS 161
Query: 220 PIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+A L+G + D QLT+ F+++ ++
Sbjct: 162 ------IDKAELVGAELRDRT---AQLTIRFVSQMISA 190
>gi|398821401|ref|ZP_10579865.1| hypothetical protein PMI42_02351 [Bradyrhizobium sp. YR681]
gi|398227929|gb|EJN14087.1| hypothetical protein PMI42_02351 [Bradyrhizobium sp. YR681]
Length = 235
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 155 RKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVN 214
+ S + + F + A Y+ I ANGD+ +LR ++ ++Y + IK+RE
Sbjct: 97 KDSTFDPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVYDSFDAAIKEREKNEQKTE 156
Query: 215 WELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+ +A L+G + D QLT+ F+++ ++
Sbjct: 157 TRFVS------IDKAELVGAELRDRT---AQLTIRFVSQMISA 190
>gi|384214330|ref|YP_005605493.1| hypothetical protein BJ6T_06100 [Bradyrhizobium japonicum USDA 6]
gi|354953226|dbj|BAL05905.1| hypothetical protein BJ6T_06100 [Bradyrhizobium japonicum USDA 6]
Length = 235
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 155 RKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVN 214
+ S + + F + A Y+ I ANGD+ +LR ++ ++Y + IK+RE
Sbjct: 97 KDSTFDPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVYDSFDAAIKEREKNEQKTE 156
Query: 215 WELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+ +A L+G + D QLT+ F+++ ++
Sbjct: 157 TRFVS------IDKAELVGAELRDRT---AQLTIRFVSQMISA 190
>gi|27375753|ref|NP_767282.1| hypothetical protein blr0642 [Bradyrhizobium japonicum USDA 110]
gi|27348891|dbj|BAC45907.1| blr0642 [Bradyrhizobium japonicum USDA 110]
Length = 235
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 155 RKSGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVN 214
+ S + + F + A Y+ I ANGD+ +LR ++ ++Y + IK+RE
Sbjct: 97 KDSTFDPRHFISGARGAYEMIVLAFANGDRRALRDLLSSEVYESFDAAIKEREKNEQKTE 156
Query: 215 WELIEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNC 257
+ +A L+G + D QLT+ F+++ ++
Sbjct: 157 TRFVS------IDKAELVGAELRDRT---AQLTIRFVSQMISA 190
>gi|18043288|gb|AAH20130.1| Mitochondrial ribosomal protein L45 [Mus musculus]
Length = 306
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSK 161
+ ++ I++PY P E +++G + + + S AI K+R+ + +
Sbjct: 76 IHLACTAGIFDPYVPPEGDARMSS-LSKEGLTQRTERLRKNAASQLAIRKIREFDTNFKT 134
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPI 221
+ F +A D++ E + + N D L VTE + + ++K + +V W +E +
Sbjct: 135 KDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMVWDLK-----YKTVRWGFVESL 189
Query: 222 IKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
+ + R G+ + + ++ Q+T+ +Q
Sbjct: 190 EPAQVVHVRCSGL--VNQSNMYGQVTVRLHTRQ 220
>gi|157786676|ref|NP_001099304.1| 39S ribosomal protein L45, mitochondrial [Rattus norvegicus]
gi|149054036|gb|EDM05853.1| mitochondrial ribosomal protein L45 (predicted) [Rattus norvegicus]
Length = 306
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSK 161
+ ++ I++PY P E +++G + + + + S AI K+++ + +
Sbjct: 76 IHLACTAGIFDPYVPPEGDARMSS-LSKEGLTQRTERLRKNVASQLAIRKIKEFDANFKT 134
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEP- 220
+ F +A D++ E + + N D L VTE + + E+K + WS V E +EP
Sbjct: 135 KDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMVWELKYKTVRWSFV--ESLEPA 192
Query: 221 -IIKMRT 226
++ +R+
Sbjct: 193 QVVHVRS 199
>gi|13385418|ref|NP_080203.1| 39S ribosomal protein L45, mitochondrial [Mus musculus]
gi|29611870|sp|Q9D0Q7.1|RM45_MOUSE RecName: Full=39S ribosomal protein L45, mitochondrial;
Short=L45mt; Short=MRP-L45; Flags: Precursor
gi|12847109|dbj|BAB27440.1| unnamed protein product [Mus musculus]
gi|26349471|dbj|BAC38375.1| unnamed protein product [Mus musculus]
gi|74180509|dbj|BAE34190.1| unnamed protein product [Mus musculus]
gi|148684129|gb|EDL16076.1| mitochondrial ribosomal protein L45 [Mus musculus]
Length = 306
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 104 VSISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLRK--SGYSK 161
+ ++ I++PY P E +++G + + + S AI K+R+ + +
Sbjct: 76 IHLACTAGIFDPYVPPEGDARMSS-LSKEGLTQRTERLRKNAASQLAIRKIREFDANFKT 134
Query: 162 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPI 221
+ F +A D++ E + + N D L VTE + + ++K + +V W +E +
Sbjct: 135 KDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMVWDLK-----YKTVRWGFVESL 189
Query: 222 IKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQ 254
+ + R G+ + + ++ Q+T+ +Q
Sbjct: 190 EPAQVVHVRCSGL--VNQSNMYGQVTVRLHTRQ 220
>gi|225712958|gb|ACO12325.1| Probable 39S ribosomal protein L45, mitochondrial precursor
[Lepeophtheirus salmonis]
Length = 340
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
I S G + + Y P E +++G + + KS A K+R + + ++
Sbjct: 100 IGSTGALIDTYVPTEG-DGKASILSKEGAKEGLTKGTGKGKSFLAARKIRSYEDDFDQKT 158
Query: 164 FYTEAVDLY-KEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELI---E 219
F +A ++Y K +L+ NG+ L K VTEK Y + + ++++ ++ WE I E
Sbjct: 159 FLLQAQEIYIKAHKSLVENGEDECLLKYVTEKAYPEMVHNVRRK-----TLRWEFIKSLE 213
Query: 220 P--IIKMRTLRARLIGVDRNDL----NKVFVQLTLEFLAKQVNCPY 259
P I+ +RT DL NK F Q+T+ F +Q Y
Sbjct: 214 PPTIVHIRT----------QDLLQKQNK-FAQVTVRFHTQQTLAVY 248
>gi|290562045|gb|ADD38419.1| Probable 39S ribosomal protein L45, mitochondrial [Lepeophtheirus
salmonis]
Length = 340
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
I S G + + Y P E +++G + + KS A K+R + + ++
Sbjct: 100 IGSTGALIDTYVPTEG-DGKASILSKEGAKEGLTKGTGKGKSFLAARKIRSYEDDFDQKT 158
Query: 164 FYTEAVDLY-KEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELI---E 219
F +A ++Y K +L+ NG+ L K VTEK Y + + ++++ ++ WE I E
Sbjct: 159 FLLQAQEIYIKAHKSLVENGEDECLLKYVTEKAYPEMVHNVRRK-----TLRWEFIKSLE 213
Query: 220 P--IIKMRTLRARLIGVDRNDL----NKVFVQLTLEFLAKQVNCPY 259
P I+ +RT DL NK F Q+T+ F +Q Y
Sbjct: 214 PPTIVHIRT----------QDLLQKQNK-FAQVTVRFHTQQTLAVY 248
>gi|346473509|gb|AEO36599.1| hypothetical protein [Amblyomma maculatum]
Length = 350
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 106 ISSPGFIYEPYAPREAIPFWRRWFTRDGWRRTKDDIILELKSAYAIAKLR--KSGYSKQK 163
I+ G ++EPY P E T+ G + + + KS + K+R + + +
Sbjct: 100 IACSGGVFEPYLPPEG-DGKVSLLTKAGAIQRMRRLEMRGKSYMNLRKIRAFEDEFDLVE 158
Query: 164 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIEPIIK 223
F A ++Y E + +A+ D+ L VTE Y + I+++ ++ W+ + +
Sbjct: 159 FADTAQEIYVEAHKALADRDEDRLHDLVTEHCYPIMMENIERK-----TLRWQFVRSLEP 213
Query: 224 MRTLRARLIGVDRNDLNKVFVQLTLEFLAKQVNCPY 259
R + R VD F Q+T+ F +Q Y
Sbjct: 214 PRAVHVRC--VDMLSKENQFGQITMRFHNQQTLAVY 247
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,699,085,170
Number of Sequences: 23463169
Number of extensions: 140646366
Number of successful extensions: 395910
Number of sequences better than 100.0: 107
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 395810
Number of HSP's gapped (non-prelim): 108
length of query: 259
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 120
effective length of database: 9,097,814,876
effective search space: 1091737785120
effective search space used: 1091737785120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)