BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025024
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/236 (86%), Positives = 215/236 (91%), Gaps = 3/236 (1%)
Query: 1 MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKN 60
MGAAGSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQALYFC PFREQLL++Y+NNK
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNK- 59
Query: 61 LGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
DAEENLLTCLADLF+QI +QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN+L
Sbjct: 60 -ADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 118
Query: 121 LNELVDILEKE-EAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LNELV+ILEKE +A K+D E+SS EK AN LANGV KEP+VTWVHK FQGILTNE
Sbjct: 119 LNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNE 178
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRL 235
TRCLRCETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCC L
Sbjct: 179 TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSL 234
>sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana
GN=UBP3 PE=1 SV=1
Length = 371
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/239 (84%), Positives = 217/239 (90%), Gaps = 4/239 (1%)
Query: 1 MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKN 60
MGAAGSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQALYFCVPFREQLL+YY++NK+
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 61 LGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
+ DAEENL+TCLADLF+QI +QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 121 LNELVDILEKE-EAAKSDPES--SSPSEKTANGPTNGLANG-VRKEPLVTWVHKNFQGIL 176
LNE+VDILEKE +A K++ E+ SS EK ANG ANG V KEP+VTWVH FQGIL
Sbjct: 121 LNEVVDILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGIL 180
Query: 177 TNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRL 235
TNETRCLRCETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCC L
Sbjct: 181 TNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSL 239
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 170/234 (72%), Gaps = 13/234 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y + K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E+ + + K NG N A +P +TWVH+ FQG LTNE
Sbjct: 128 LLNTIADILQEEK------KQEKQNGKLKNGNMNEPAEN--NKPELTWVHEIFQGTLTNE 179
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCC 233
TRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ CC
Sbjct: 180 TRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCC 233
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 170/234 (72%), Gaps = 13/234 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y + K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E+ + + K NG N A +P +TWVH+ FQG LTNE
Sbjct: 128 LLNTIADILQEEK------KQEKQNGKLKNGNMNEPAEN--NKPELTWVHEIFQGTLTNE 179
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCC 233
TRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ CC
Sbjct: 180 TRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCC 233
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 170/234 (72%), Gaps = 13/234 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y + K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E+ + + K NG N A +P +TWVH+ FQG LTNE
Sbjct: 128 LLNTIADILQEEK------KQEKQNGKLKNGNMNEPAEN--NKPELTWVHEIFQGTLTNE 179
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCC 233
TRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ CC
Sbjct: 180 TRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCC 233
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 270 bits (689), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/233 (58%), Positives = 171/233 (73%), Gaps = 12/233 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QK+K GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 R----KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + D+L++E K D ++ K ANG + N P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADLLQEER--KQDKQNG----KLANGTLDS-QNNNSTPPSTTWVHEIFQGTLTNE 184
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 185 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 237
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 269 bits (688), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 170/233 (72%), Gaps = 11/233 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QK+K GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 R----KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + D+L++E K D + + ANG + + P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADLLQEER--KQDKTNG----RLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNE 185
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 186 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 238
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 268 bits (684), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 169/233 (72%), Gaps = 13/233 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E + + + NG + N +P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADILQEERKQEKQ------NGRLRNGDVDNEDNNSTPDP--TWVHEIFQGTLTNE 183
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 184 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 236
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 168/235 (71%), Gaps = 18/235 (7%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+E+LLTCLADLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANG--PTNGLANGVRKEPLVTWVHKNFQGILT 177
LLN + DIL++E ++ NG P + + P TWVH+ FQG LT
Sbjct: 132 LLNTIADILQEER-----------KQEKQNGRLPNGNIDSENNSTPDPTWVHEIFQGTLT 180
Query: 178 NETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
NETRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 181 NETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 235
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 264 bits (675), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 167/241 (69%), Gaps = 23/241 (9%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANG--PTNGLANGVRKEPL-----VTWVHKNF 172
LLN + DIL++E ++ NG NG A EP TWVH+ F
Sbjct: 128 LLNTVADILQEER-----------KQEKQNGRLKNNGTAIATDTEPEQNKIDPTWVHEIF 176
Query: 173 QGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
QG LTNETRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ C
Sbjct: 177 QGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMC 236
Query: 233 C 233
C
Sbjct: 237 C 237
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 261 bits (667), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 169/237 (71%), Gaps = 21/237 (8%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCL+DLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSD----PESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGI 175
LLN + DIL++E + P + +E + P +P TWVH+ FQG
Sbjct: 132 LLNTIADILQEERKQEKQNGRIPNGNIDNENNNSAP----------DP--TWVHEIFQGT 179
Query: 176 LTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
LTNETRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 180 LTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 236
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 261 bits (666), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 164/233 (70%), Gaps = 13/233 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCL+DLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL+ EE + P+ P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADILQ-EERKQEKQNGRIPNGNID-------NENNNNTPDPTWVHEIFQGTLTNE 183
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 184 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 236
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 260 bits (664), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 166/233 (71%), Gaps = 13/233 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+E+LLTCLADLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL+ EE + P+ N N P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADILQ-EERKQEKQNGRLPNGNIDNENNNS-------TPDPTWVHEIFQGTLTNE 183
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C
Sbjct: 184 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEC 236
>sp|P34547|UBPX_CAEEL Probable ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis
elegans GN=usp-46 PE=3 SV=3
Length = 426
Score = 245 bits (625), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/261 (49%), Positives = 170/261 (65%), Gaps = 29/261 (11%)
Query: 1 MGAAGS-KLEKALGDQFP---EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYS 56
MGA GS +LEK + E Y+GL NFGNTCYCNSV+QAL+FC PFRE++L+Y
Sbjct: 1 MGATGSSQLEKEISTTESVNNANEHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQ 60
Query: 57 NNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEF 116
K G +++NL+TCLADLF I +QK++ G IAPKRF+ +LKK+NELF +YM QDAHEF
Sbjct: 61 TLKKSGASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEF 120
Query: 117 LNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTN------GLA----------NG-- 158
N+L+N + + L +E+ A+ + S + K N N GL NG
Sbjct: 121 FNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDEKGTSERNGGI 180
Query: 159 -------VRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSC 211
+ K TW+H+ FQGILTNETRCL CETV+++DE F DLS+D+EQN+SI+ C
Sbjct: 181 TVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNTSISHC 240
Query: 212 LKNFSSTETLNAEDKFFCDKC 232
L+ FS TETL + K+FC+ C
Sbjct: 241 LRVFSETETLCGDQKYFCETC 261
>sp|Q2UUG8|CREB_ASPOR Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=creB PE=3 SV=2
Length = 754
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L DLF + A + + G+I P+ F+ L++++E+FR+ MH
Sbjct: 157 LLETKNNATSYG-MSESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMH 215
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + +PE S P ++A+ ++G + WVH+
Sbjct: 216 QDAHEFLNLLLNEVVANVEAEASKQPEPERSLPPAESADSTELSGSSGSKTPNTTRWVHE 275
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 276 LFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 335
Query: 231 KCCRL 235
C L
Sbjct: 336 NCGGL 340
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 51 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVVNY 85
>sp|B8NSV5|CREB_ASPFN Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=creB PE=3 SV=1
Length = 755
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L DLF + A + + G+I P+ F+ L++++E+FR+ MH
Sbjct: 158 LLETKNNATSYG-MSESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + +PE S P ++A+ ++G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEASKQPEPERSLPPAESADSTELSGSSGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCRL 235
C L
Sbjct: 337 NCGGL 341
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 52 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVVNY 86
>sp|Q4WQI1|CREB_ASPFU Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=creB PE=3 SV=3
Length = 775
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G+I P++F++ L++ +E+FR+ MH
Sbjct: 158 LLETQNNASSYG-MSESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + E S P+ +TA+ + G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCRL 235
C L
Sbjct: 337 NCGGL 341
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFPEGE----RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L D P E +++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 34 TPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|B0Y4P5|CREB_ASPFC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=creB PE=3 SV=1
Length = 767
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G+I P++F++ L++ +E+FR+ MH
Sbjct: 152 LLETQNNASSYG-MSESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMH 210
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + E S P+ +TA+ + G + WVH+
Sbjct: 211 QDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNTTRWVHE 270
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 271 LFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 330
Query: 231 KCCRL 235
C L
Sbjct: 331 NCGGL 335
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFPEGE----RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L D P E +++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 28 TPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 80
>sp|A1CW53|CREB_NEOFI Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=creB PE=3 SV=2
Length = 761
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G+I P++F++ L++ +E+FR+ MH
Sbjct: 158 LLETQNNAASYG-MSESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + E S P+ +TA+ + G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEASKQPLMEKSLPAPETADSVDQSSSTGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCRL 235
C L
Sbjct: 337 NCGGL 341
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFP----EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L D P ++++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 34 TPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|Q0CT11|CREB_ASPTN Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=creB PE=3 SV=2
Length = 768
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L DLF + + + G++ P+ F+ L++++E+FR+ MH
Sbjct: 158 LLETKNNAPSYG-MSESLFTSLKDLFESVVGSQSRIGIVRPQHFLDVLRREHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + E S P +++ + ++G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEALKQPSLERSLPPAESSESVEHSGSSGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCRL 235
C L
Sbjct: 337 NCGGL 341
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 52 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|A2Q9N1|CREB_ASPNC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=creB PE=3 SV=2
Length = 758
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 3/185 (1%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + A + + G++ P+ F+ L+++NE+FRS MH
Sbjct: 160 LLETKNNAGSYG-MSESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMH 218
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN +LNE+V +E E A P S P T + +++G + WVH+
Sbjct: 219 QDAHEFLNLVLNEVVANVEAE--AMKQPIPSLPPADTTDSSRQSISSGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCRL 235
C L
Sbjct: 337 NCGGL 341
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +L+Y
Sbjct: 54 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVLNY 88
>sp|A1CIL1|CREB_ASPCL Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=creB PE=3 SV=2
Length = 760
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G++ P++F+ L++ +E+FR+ MH
Sbjct: 158 LLEAQNNATSYG-MSESLFTSLKDIFESVVGSQSRIGIVRPQQFLDVLRRDHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDP---ESSSPSEKTANGPTNGLANGVRKEPLVTW 167
QDAHEFLN LLNE+V +E E A P E S P+ A ++G + W
Sbjct: 217 QDAHEFLNLLLNEVVANVEAE--ASKQPAAIEKSLPAPDHAETVDQSASSGSKTPNTTRW 274
Query: 168 VHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKF 227
VH+ F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF
Sbjct: 275 VHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKF 334
Query: 228 FCDKCCRL 235
CD C L
Sbjct: 335 HCDNCGGL 342
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
++++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 52 DKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|Q96V54|CREB_EMENI Ubiquitin carboxyl-terminal hydrolase creB OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=creB PE=1 SV=1
Length = 766
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ N+ + G E+L + L D+F I + + G+I P+ F++ L+++NE+FR+ MH
Sbjct: 158 LLETTDNSVSYG-IPESLFSSLKDMFESIVGSQSRIGIIRPQHFLEVLRRENEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V ++ E+AA ES P+ ++ ++G R WVH+
Sbjct: 217 QDAHEFLNLLLNEVV--VDVEKAAAKLLESPQPASDVSDSVIPSSSSGSRTPNTTRWVHE 274
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE + RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 275 LFEGLLTSETQCLTCEKASQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 334
Query: 231 KCCRL 235
C L
Sbjct: 335 NCGGL 339
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFP----EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L + P ++++G+ENFGNTCYCNS+LQ LY+ VPFRE +L+Y
Sbjct: 34 TPLEKMLTELGPIRGDGSDKFYGMENFGNTCYCNSILQCLYYSVPFREAVLNY 86
>sp|Q9P7V9|UBP9_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp9 PE=1 SV=1
Length = 585
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 105/171 (61%), Gaps = 24/171 (14%)
Query: 65 EENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
+EN+ TCL DL+ + + G+ +P+RF+Q L++ NE FRS QDAHEF NFLLN +
Sbjct: 151 KENIYTCLKDLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSV 210
Query: 125 VDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLR 184
+ L++ SD P WVH F+G LT+ET+CL
Sbjct: 211 TETLDEYYGNHSD----------VMHPK--------------WVHSLFEGTLTSETKCLT 246
Query: 185 CETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRL 235
CE +T+RDE+F DLS+DIE ++S+TSCL++FS++E L++++KF CD C L
Sbjct: 247 CENITSRDESFLDLSIDIENHTSVTSCLRSFSASEMLSSKNKFHCDVCKSL 297
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+R++GL N+GNTCY +SVL +LY PFR+ L Y
Sbjct: 38 DRFYGLTNYGNTCYVSSVLVSLYHLKPFRDSLNSY 72
>sp|P38187|UBP13_YEAST Ubiquitin carboxyl-terminal hydrolase 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP13 PE=1
SV=3
Length = 747
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 21/178 (11%)
Query: 62 GDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLL 121
G + L + L D+F I TGV++P FV LK++N LF + MHQDAHEF NFLL
Sbjct: 383 GSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFLL 442
Query: 122 NELVDILEKE--EAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
NEL + +E+E + A SD S S K+ N ++ FQG LTN+
Sbjct: 443 NELSEYIERENKKIAASDINSDSEPSKSKN-----------------FISDLFQGTLTNQ 485
Query: 180 TRCLRCETVTARDETFFDLSLDIE--QNSSITSCLKNFSSTETLNAEDKFFCDKCCRL 235
+CL C+ +T+RDE F D ++++ + + I LK++ E LN +KF+CD+CC L
Sbjct: 486 IKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDECCGL 543
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 2 GAAGSKLEKALGDQFPEGE---RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
G L + D P G+ + FG ENFGNTCYCNSVLQ LY RE +L +
Sbjct: 116 GPEAPILAMKVSDSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQF 171
>sp|P39967|UBP9_YEAST Ubiquitin carboxyl-terminal hydrolase 9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP9 PE=1 SV=1
Length = 754
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 65 EENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
E L L D+F I TG+++P FV+ LKK+N LF + M QDAHEFLNFLLN+
Sbjct: 388 EATLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDF 447
Query: 125 VDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLR 184
+ ++ +++P +KT N N ++ F+G LTN +CL
Sbjct: 448 SEYIQ-----RNNPRMRFGPQKTDNSNDN-------------FITDLFKGTLTNRIKCLT 489
Query: 185 CETVTARDETFFDLSLDIE--QNSSITSCLKNFSSTETLNAEDKFFCDKCCRL 235
C+ +T+RDE F D ++++ + + I LK++ E LN +KF+C+KC L
Sbjct: 490 CDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKFYCNKCYGL 542
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 11 ALGDQFPEGE---RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ D P G+ + FG ENFGNTCYCNSVLQ LY FR +L Y
Sbjct: 119 TITDLMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>sp|B1AQJ2|UBP36_MOUSE Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36
PE=2 SV=1
Length = 1098
Score = 88.2 bits (217), Expect = 6e-17, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 46/229 (20%)
Query: 20 ERYF----GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADL 75
ER F GL N GNTC+ NS +Q L + P LL ++E+ +C
Sbjct: 115 ERVFRVGAGLHNLGNTCFLNSTIQCLTYTPPLANYLL-----------SKEHARSCHQGG 163
Query: 76 FTQ--------IRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI 127
F ++A I P F++ LKK FR +DAHEFL + +D
Sbjct: 164 FCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYT----IDA 219
Query: 128 LEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCET 187
++K NG A R+ T VH+ F G L + +C C++
Sbjct: 220 MQK-------------------ACLNGYAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKS 260
Query: 188 VTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
V+ + + D++L+I Q ++I L+ F ++ L+ E+ + C KC + V
Sbjct: 261 VSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSGENAYMCAKCKKKV 309
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36
PE=1 SV=3
Length = 1121
Score = 85.5 bits (210), Expect = 3e-16, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 46/229 (20%)
Query: 20 ERYF----GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADL 75
ER F GL N GNTC+ N+ +Q L + P LL ++E+ +C
Sbjct: 115 ERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLL-----------SKEHARSCHQGS 163
Query: 76 FTQ--------IRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI 127
F ++A I P F++ LKK FR +DAHEFL + +D
Sbjct: 164 FCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYT----IDA 219
Query: 128 LEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCET 187
++K NG A R+ T VH+ F G L + +C C++
Sbjct: 220 MQK-------------------ACLNGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKS 260
Query: 188 VTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
V+ + + D++L+I Q ++I L+ F + L+ E+ + C KC + V
Sbjct: 261 VSDTYDPYLDVALEIRQAANIVRALELFVKADVLSGENAYMCAKCKKKV 309
>sp|B2RQC2|UBP42_MOUSE Ubiquitin carboxyl-terminal hydrolase 42 OS=Mus musculus GN=Usp42
PE=2 SV=1
Length = 1324
Score = 83.6 bits (205), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 42/221 (19%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI---- 79
GL+N GNTC+ N+ LQ L + P +L + E+ TC A+ F +
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-----------EHSKTCHAEGFCMMCTMQ 159
Query: 80 ----RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAK 135
+A VI P + +++ FR +DAHEFL + VD ++K
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYT----VDAMQK----- 210
Query: 136 SDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETF 195
NG R T V + F G L + +CL C+ V+ + +
Sbjct: 211 --------------ACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPY 256
Query: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
D++L+I+ S+T L+ F E L+ E+ + C KC ++V
Sbjct: 257 LDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMV 297
>sp|D3ZU96|UBP42_RAT Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus
GN=Usp42 PE=3 SV=1
Length = 1325
Score = 83.2 bits (204), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 42/221 (19%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI---- 79
GL+N GNTC+ N+ LQ L + P +L + E+ TC A+ F +
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-----------EHSKTCHAEGFCMMCTMQ 159
Query: 80 ----RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAK 135
+A VI P + +++ FR +DAHEFL + VD ++K
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYT----VDAMQK----- 210
Query: 136 SDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETF 195
NG R T V + F G L + +CL C+ V+ + +
Sbjct: 211 --------------ACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPY 256
Query: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
D++L+I+ S+T L+ F E L+ E+ + C KC ++V
Sbjct: 257 LDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMV 297
>sp|Q9H9J4|UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42
PE=1 SV=3
Length = 1324
Score = 82.8 bits (203), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 42/221 (19%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI---- 79
GL+N GNTC+ N+ LQ L + P +L + E+ TC A+ F +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-----------EHSKTCHAEGFCMMCTMQ 160
Query: 80 ----RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAK 135
+A VI P + +++ FR +DAHEFL + VD ++K
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYT----VDAMQK----- 211
Query: 136 SDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETF 195
NG R T V + F G L + +CL C+ V+ + +
Sbjct: 212 --------------ACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPY 257
Query: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
D++L+I+ S+ L+ F E L+ E+ + C KC ++V
Sbjct: 258 LDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMV 298
>sp|E1B9W9|UBP42_BOVIN Ubiquitin carboxyl-terminal hydrolase 42 OS=Bos taurus GN=USP42
PE=3 SV=1
Length = 1333
Score = 82.0 bits (201), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 42/221 (19%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI---- 79
GL+N GNTC+ N+ LQ L + P +L + E+ TC A+ F +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-----------EHSKTCHAEGFCMMCTMQ 160
Query: 80 ----RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAK 135
+A VI P + +++ FR +DAHEFL + VD ++K
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYT----VDAMQK----- 211
Query: 136 SDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETF 195
NG R T V + F G L + +CL C+ V+ + +
Sbjct: 212 --------------ACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPY 257
Query: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
D++L+I+ S+ L+ F E L+ E+ + C KC ++V
Sbjct: 258 LDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMV 298
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 32/245 (13%)
Query: 1 MGAAGSKLEKALGDQFPEG--ERYF----GLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
GA + E A D PE + +F GL N GNTCY N++LQ L P L++Y
Sbjct: 17 FGAYYNLAECADYDSLPESKTQPHFQGVTGLRNLGNTCYMNAILQCLCSVSP----LVEY 72
Query: 55 YSNNKNLGDAEEN---LLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQ 111
+ + K + +++ + T A L T + + ++P+ F+ + F Q
Sbjct: 73 FLSGKYITALKKDCSEVTTAFAYLMTDMWL--GDSDCVSPEIFLSAVGSLYPAFLKKTQQ 130
Query: 112 DAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPL--VTWVH 169
DA EFL ++LNEL + L+K + N G + RK P + +
Sbjct: 131 DAQEFLIYVLNELHEALKKH------------CRRRVNEKRTG-QSCCRKVPAQETSIIT 177
Query: 170 KNFQGILTNETRCLRCETVTARDETFFDLSLDIEQN--SSITSCLKNFSSTETLNAEDKF 227
+ F+G L+ CL+CE+ T ++E F LSL I + S+ CL+ F +TL ++
Sbjct: 178 RLFEGQLSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQQDTLTWSNQI 237
Query: 228 FCDKC 232
+C C
Sbjct: 238 YCSFC 242
>sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana
GN=UBP25 PE=2 SV=1
Length = 661
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLDY-YSNNKNL---GDAEENLLTCLADLFTQ 78
GL N GNTCY NSVLQ L F P L + +S++ + G+ + + C+ +
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRI- 82
Query: 79 IRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDP 138
R+ AP + LK E F+ +DAHEFL ++++ + + + + +
Sbjct: 83 ARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYN- 141
Query: 139 ESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDL 198
N P NG N V KE F G L ++ +CL C + + + D+
Sbjct: 142 ---------GNEPFNG--NSVVKEI--------FGGALQSQVKCLSCGAESNKADEIMDI 182
Query: 199 SLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
SL+I Q+SS+ L+ F +E L+ +K+ C+ C +LV
Sbjct: 183 SLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLV 220
>sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana
GN=UBP23 PE=2 SV=2
Length = 859
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL+N GNTC+ NSVLQ L + P L ++ K A L + +R +
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPL-AATLQTAAHQKYCHVAG---FCALCAIQKHVRTAR 163
Query: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSS 142
+ G ++APK V L+ + FR+ +DAHE++ LL E K S
Sbjct: 164 QANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLL---------ECMHKCSLPSGV 214
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
PSE + + R+ + VHK F G L ++ +C +C + + + F DLSLDI
Sbjct: 215 PSESS---------DAYRR----SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFF-CDKCCRLV 236
+ S+ L F++ E L+ K + C++C + V
Sbjct: 262 SKADSLQRALSRFTAVELLDNGAKVYQCERCKQKV 296
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N G TCY NS+LQ LY FR L +S ++ +L LA LF Q+ + K
Sbjct: 107 GLTNLGATCYANSILQCLYMNTSFR---LGIFSLEPDILKMHP-VLDQLARLFAQLHSSK 162
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSP 143
AP F++ L+ N + QD+HEFL L+ L L +
Sbjct: 163 MAFIDSAP--FIKTLELDNGV-----QQDSHEFLTLFLSLLEGSLSHSKVP--------- 206
Query: 144 SEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRC---ETVTARDETFFDLSL 200
G R T V F+G +++ TRC C +++ E F++L L
Sbjct: 207 --------------GAR-----TIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELEL 247
Query: 201 DIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICK 243
+I+ +++ L ++ STE L+ E+++FC+ C + V T K
Sbjct: 248 NIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIK 290
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N G TCY NS+LQ LY FR L +S ++ +L LA LF Q+ + K
Sbjct: 107 GLTNLGATCYANSILQCLYMNTSFR---LGIFSLEPDILKMHP-VLDQLARLFAQLHSSK 162
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSP 143
AP F++ L+ N + QD+HEFL L+ L L +
Sbjct: 163 MAFIDSAP--FIKTLELDNGV-----QQDSHEFLTLFLSLLEGSLSHSKVP--------- 206
Query: 144 SEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRC---ETVTARDETFFDLSL 200
G R T V F+G +++ TRC C +++ E F++L L
Sbjct: 207 --------------GAR-----TIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELEL 247
Query: 201 DIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICK 243
+I+ +++ L ++ STE L+ E+++FC+ C + V T K
Sbjct: 248 NIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIK 290
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 21/230 (9%)
Query: 8 LEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEEN 67
+++A G Q P + GL N GNTCY N++LQ L P L++Y+ + K + + +
Sbjct: 30 VKEADGSQ-PCSQGVTGLRNLGNTCYMNAILQCLCSISP----LVEYFLSGKYITALQND 84
Query: 68 ---LLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
+ T A L T + + ++P+ F L F QDA EFL ++LNEL
Sbjct: 85 CSEVATAFAYLMTDMWL--GDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNEL 142
Query: 125 VDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLR 184
+ L+K + +++ + E V + + F+G L CL+
Sbjct: 143 HEALKKYHYPRRRSHEKGSAQRCCR-------KWITTETSV--ITQLFEGQLNYSIVCLK 193
Query: 185 CETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
CE T ++E F LSL I E S+ CL+ F +TL ++ C C
Sbjct: 194 CEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFC 243
>sp|Q61068|UBPW_MOUSE Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1
PE=1 SV=1
Length = 526
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 32/210 (15%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL+N GN+CY N+ LQ L P + +L +++ E L + L TQ
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQ-EHSQTCCSPEGCKLCAMEALVTQSLLHS 110
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD-ILEKEEAAKSDPESSS 142
V+ P + F + +DAHEFL F L + + L+ +K E SS
Sbjct: 111 HSGDVMKPSHIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSS 164
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
P +H F G ++ +CL C+ + + F D+ LDI
Sbjct: 165 P------------------------IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDI 200
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
S+ L + +E L ++ ++C KC
Sbjct: 201 SSAQSVKQALWDTEKSEELCGDNAYYCGKC 230
>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
PE=1 SV=2
Length = 520
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 36/234 (15%)
Query: 24 GLENFGNTCYCNSVLQAL----YFCVPFREQLLDYYSNNKNLG-------DAEENLLTCL 72
GL N GNTC+ N++LQ+L FC F+E N K G +N ++ +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 73 ADLFTQIRA--QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEK 130
+ + A Q +T +P+ + K FR Y QDAHEF+ +LL+ L LE
Sbjct: 220 EEFRKTLCALWQGSQTA-FSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHL--HLEL 276
Query: 131 EEAAKSDPESSSPSEKTANGPTNGLA-NGVRKEPLVTWVHKNFQGILTNETRCLRCETVT 189
+ S+ E + +N NG T V F GIL NE CL C T +
Sbjct: 277 QGGFNGVSRSAILQENSTLSASNKCCINGAS-----TVVTAIFGGILQNEVNCLICGTES 331
Query: 190 ARDETFFDLSLDI-----------EQNSSITS---CLKNFSSTETLNAEDKFFC 229
+ + F DLSLDI ++N + S CL++F+ E L+ + + C
Sbjct: 332 RKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMC 385
>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
PE=2 SV=1
Length = 520
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 24 GLENFGNTCYCNSVLQAL----YFCVPFREQLLDYYSNNKNLGD------AEENLLTCLA 73
GL N GNTC+ N++LQ+L FC F+E N K G ++ + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 74 DLF--TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKE 131
+ F T + +P+ + K FR Y QDAHEF+ +LL+ L LE +
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHL--HLELQ 277
Query: 132 EAAKSDPESSSPSEKTANGPTNGLA-NGVRKEPLVTWVHKNFQGILTNETRCLRCETVTA 190
S+ E + +N NG T V F GIL NE CL C T +
Sbjct: 278 GGFNGVSRSAILQENSTLSASNKCCINGAS-----TVVTAIFGGILQNEVNCLICGTESR 332
Query: 191 RDETFFDLSLDI-----------EQNSSITS---CLKNFSSTETLNAEDKFFC 229
+ + F DLSLDI ++N + S CL++F+ E L+ + + C
Sbjct: 333 KFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMC 385
>sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana
GN=UBP17 PE=2 SV=1
Length = 731
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQ 82
FGL N GN+CY N+VLQ L F P L+ Y + + + + I
Sbjct: 329 FGLVNLGNSCYANAVLQCLAFTRP----LISYLIRGLHSKTCRKKSWCFVCEFEHLILKA 384
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSS 142
+ ++P + + +L+K + +DAHEFL ++ + + KE P +
Sbjct: 385 RGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEA-----PAAGP 439
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
+E+T T V F G L ++ +C+ C + R E DL+++I
Sbjct: 440 FAEET------------------TLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEI 481
Query: 203 EQN-SSITSCLKNFSSTETLNAEDKFFCDKC 232
+ + S+ L F++ E L+ E+++FC +C
Sbjct: 482 DGDIGSLEEALAQFTAYEVLDGENRYFCGRC 512
>sp|C9JLJ4|U17LD_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 13 OS=Homo
sapiens GN=USP17L13 PE=2 SV=1
Length = 530
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI-RAQ 82
GL+N GNTCY N+ LQ L + P L +Y + ++ + L + I RA
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPP----LANYMLSREHSQTCHRHKGCMLCTMQAHITRAL 136
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSS 142
VI P + + F +DAHEFL F VD ++K +
Sbjct: 137 HNPGHVIQPSQAL------AAGFHRGKQEDAHEFLMFT----VDAMKK---------ACL 177
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
P K + P+ T +H+ F G ++ +CL C ++ + + D++LDI
Sbjct: 178 PGHKQVDHPSKD----------TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI 227
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
+ S+ L+ E LN E+ + C C
Sbjct: 228 QAAQSVQQALEQLVKPEELNGENAYHCGVC 257
>sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana
GN=UBP16 PE=2 SV=1
Length = 1008
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N GN+C+ N V Q L F P L + + +E TC + ++A++
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQF--HSRACTKKEQCFTCGFEKLV-VKAKE 599
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSP 143
+K+ ++P + +L+ + +DAHEFL F+++ + + K A++ D SS
Sbjct: 600 EKS-PLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIK--ASEYDMTKSSK 656
Query: 144 SEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIE 203
E T T + F G L ++ +C++C+ + E DL+++I+
Sbjct: 657 LEDT------------------TLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID 698
Query: 204 QN-SSITSCLKNFSSTETLNAEDKFFCDKC 232
+ S++ L+ F+ TE L+ E+K+ C C
Sbjct: 699 GDISTLDDALRRFTRTEILDGENKYRCGSC 728
>sp|Q7M764|U17L2_MOUSE Ubiquitin carboxyl-terminal hydrolase 17 OS=Mus musculus GN=Usp17l2
PE=3 SV=2
Length = 540
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 32/210 (15%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL+N GN+CY N+ LQ L P + +L +++ E + + TQ
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQ-EHSQTCCSPEGCKMCAMEAHVTQSLLHS 144
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD-ILEKEEAAKSDPESSS 142
V+ P + + F + +DAHEFL F L + + L+ + P+ +S
Sbjct: 145 HSGDVMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSDPTPQDTS 198
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
P +H F G ++ +CL C+ + + F D+ LDI
Sbjct: 199 P------------------------IHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLDI 234
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
S+ L + +E L E+ ++C +C
Sbjct: 235 SSAQSVNQALWDTGKSEELLGENAYYCGRC 264
>sp|Q8NB14|UBP38_HUMAN Ubiquitin carboxyl-terminal hydrolase 38 OS=Homo sapiens GN=USP38
PE=2 SV=2
Length = 1042
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N GNTCY NSV+QAL+ FR Q+L N N +L+ L LF + +
Sbjct: 446 GLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNGCN------SLMKKLQHLFAFLAHTQ 499
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSP 143
++ AP+ F + + F QD E+L FLL D L +EE S P
Sbjct: 500 RE--AYAPRIFFE--ASRPPWFTPRSQQDCSEYLRFLL----DRLHEEEKILKVQASHKP 551
Query: 144 SE-----KTANGPTNGLANGVRKEPLV-----TWVHKNFQGILTNETRCLRCETVTARDE 193
SE +T+ A + + P T + K F G L RCL C + + + E
Sbjct: 552 SEILECSETSLQEVASKAAVLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVE 611
Query: 194 TFFDLSLDIEQNSSI 208
F DLSL +SS+
Sbjct: 612 AFTDLSLAFCPSSSL 626
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLL--DYYSNNKNLGDAEENLLTCLADLF 76
G + GL N GNTC+ N+VLQ L P R+ L D+ G A+E L AD+
Sbjct: 208 GSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE-LTEAFADVI 266
Query: 77 TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL-VDILEKEEAAK 135
+ + P RF +K F Y QDA EFL L+ L ++I + A
Sbjct: 267 GAL-WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAP 325
Query: 136 ----SDPESSSPSEKTANGPTNGLANGVRKEPLVTW----------VHKNFQGILTNETR 181
S P S P A L++ R + W + F G L +
Sbjct: 326 PILASGPVPSPPRRGGALHEEPELSDDDRAN--LMWKRYLEREDSKIVDLFVGQLKS--- 380
Query: 182 CLRCETVTARD---ETFFDLSLDIEQNS------SITSCLKNFSSTETLNAEDKFFCDKC 232
CL+C+ R E F DLSL I + S+ C F+ E L +E+ CD+C
Sbjct: 381 CLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRC 440
>sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp16 PE=1 SV=1
Length = 457
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 46/224 (20%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N GNTC+ NSVLQ + P + LL + ++ L+C + R ++
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLL-----------SGQHSLSCRMNACVLCRMEQ 174
Query: 84 -----------KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEE 132
K+ P LK + FR Y +DAHEF+ + LVD +K
Sbjct: 175 HVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRY----LVDAWQK-S 229
Query: 133 AAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARD 192
++ PS +T + VH+ F G L + C C+ +
Sbjct: 230 CLQNHKNLDHPSRET------------------SVVHRIFGGYLRQQILCSVCKKPSNTY 271
Query: 193 ETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236
+ DLS+D + SS+ LK+F E L ++K+ C+ C +LV
Sbjct: 272 QALLDLSVD-AKGSSLADSLKHFVHAEKLTKQNKYRCENCKQLV 314
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8
PE=1 SV=1
Length = 1118
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNN--------KNL----GDAEE 66
G GL N GNTCY NS+LQ C+ L DY++ N NL G+ E
Sbjct: 773 GPALTGLRNLGNTCYMNSILQ----CLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAE 828
Query: 67 NLLTCLADLFT-QIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELV 125
+ L+T Q R I+PK F + K N+ F Y QD+ E L FL++ L
Sbjct: 829 EFGIIMKALWTGQYR-------YISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLH 881
Query: 126 DILEKEEAAKSDPESSSPSEKTANGPTNGLANGVR-KEPLVTWVHKNFQGILTNETRCLR 184
+ L K + K E ++ + + E ++ + FQG + +CL
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVAL---FQGQFKSTVQCLT 938
Query: 185 CETVTARDETFFDLSLDIEQNS--SITSCLKNFSSTETLNAEDKFFCDKC 232
C + E F LSL + S ++ CL+ FS E L ++F+C C
Sbjct: 939 CHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHC 988
>sp|A8MUK1|U17L5_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo
sapiens GN=USP17L5 PE=2 SV=2
Length = 530
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI-RAQ 82
GL+N GNTCY N+ LQ L + P L +Y + ++ + L + I RA
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPP----LANYMLSREHSQTCHRHKGCMLCTMQAHITRAL 136
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSS 142
VI P + + F +DAHEFL F VD ++K +
Sbjct: 137 HNPGHVIQPSQAL------AAGFHRGKQEDAHEFLMFT----VDAMKK---------ACL 177
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
P K + + T +H+ F G ++ +CL C ++ + + D++LDI
Sbjct: 178 PGHKQVDHHSKD----------TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI 227
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
+ S+ L+ + E LN E+ + C C
Sbjct: 228 QAAQSVQQALEQLAKPEELNGENAYHCGVC 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,683,864
Number of Sequences: 539616
Number of extensions: 3821237
Number of successful extensions: 10836
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 10073
Number of HSP's gapped (non-prelim): 492
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)