Query 025024
Match_columns 259
No_of_seqs 109 out of 1221
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 18:40:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y6e_A Ubiquitin carboxyl-term 100.0 1.5E-47 5.1E-52 331.8 8.5 234 17-257 3-259 (367)
2 3nhe_A Ubiquitin carboxyl-term 100.0 7.3E-46 2.5E-50 318.7 9.9 234 18-257 5-244 (348)
3 3i3t_A Ubiquitin carboxyl-term 100.0 1.3E-45 4.4E-50 318.0 10.1 234 20-257 1-254 (355)
4 2gfo_A Ubiquitin carboxyl-term 100.0 8.8E-45 3E-49 317.0 14.4 232 19-257 59-296 (396)
5 1nb8_A Ubiquitin carboxyl-term 100.0 4.5E-42 1.5E-46 295.8 15.0 197 18-257 2-198 (353)
6 2ayn_A Ubiquitin carboxyl-term 100.0 1.9E-41 6.6E-46 297.0 12.9 216 19-257 11-237 (404)
7 3ihp_A Ubiquitin carboxyl-term 100.0 1.7E-41 5.6E-46 319.0 11.5 198 20-257 342-591 (854)
8 3mhs_A Ubiquitin carboxyl-term 100.0 1.1E-40 3.7E-45 298.0 15.4 219 17-257 136-366 (476)
9 2f1z_A Ubiquitin carboxyl-term 100.0 1.5E-39 5.1E-44 293.4 14.2 197 18-257 171-367 (522)
10 1vjv_A Ubiquitin carboxyl-term 100.0 1.1E-39 3.9E-44 286.7 12.6 192 20-257 22-229 (415)
11 2vhf_A Ubiquitin carboxyl-term 99.7 1.2E-18 4.2E-23 146.1 5.5 98 22-125 9-112 (374)
12 1qmy_A Protease, leader protea 91.6 0.055 1.9E-06 38.7 1.1 23 20-42 11-33 (167)
13 3mp2_A Non-structural protein 84.0 0.82 2.8E-05 35.3 3.4 68 22-121 13-80 (211)
14 2fe8_A PP1AB, ORF1AB, replicas 77.1 4.5 0.00015 33.3 5.7 73 21-121 101-174 (315)
15 1qyp_A RNA polymerase II; tran 58.8 7.8 0.00027 22.9 2.7 13 177-189 13-25 (57)
16 1fv5_A First zinc finger of U- 54.9 4.1 0.00014 21.5 0.9 15 221-235 3-17 (36)
17 2elm_A Zinc finger protein 406 46.3 7.3 0.00025 19.8 1.0 14 223-236 6-19 (37)
18 1p7a_A BF3, BKLF, kruppel-like 45.6 8.4 0.00029 19.4 1.2 14 223-236 8-21 (37)
19 2i5o_A DNA polymerase ETA; zin 45.4 8.1 0.00028 21.0 1.1 15 224-238 7-21 (39)
20 3a43_A HYPD, hydrogenase nicke 44.8 14 0.00046 26.5 2.5 53 175-237 66-118 (139)
21 2kvh_A Zinc finger and BTB dom 44.8 8.4 0.00029 17.6 1.0 10 226-235 3-12 (27)
22 2elx_A Zinc finger protein 406 42.2 9.9 0.00034 18.7 1.1 13 223-235 4-16 (35)
23 3h0g_I DNA-directed RNA polyme 41.5 24 0.00084 24.1 3.3 57 178-236 25-82 (113)
24 1zvf_A 3-hydroxyanthranilate 3 41.2 5.8 0.0002 29.6 0.1 49 179-237 124-172 (176)
25 1srk_A Zinc finger protein ZFP 41.0 10 0.00035 18.7 1.1 14 223-236 4-17 (35)
26 2kvf_A Zinc finger and BTB dom 40.9 10 0.00035 17.4 1.0 10 226-235 3-12 (28)
27 2kvg_A Zinc finger and BTB dom 40.8 7.9 0.00027 17.9 0.6 10 226-235 3-12 (27)
28 1znf_A 31ST zinc finger from X 37.9 11 0.00039 16.9 0.9 10 227-236 2-11 (27)
29 2elt_A Zinc finger protein 406 37.2 13 0.00046 18.3 1.2 12 224-235 7-18 (36)
30 2elr_A Zinc finger protein 406 36.7 15 0.00051 18.1 1.3 13 224-236 7-19 (36)
31 2elo_A Zinc finger protein 406 35.7 12 0.00039 18.8 0.7 13 223-235 6-18 (37)
32 2elv_A Zinc finger protein 406 35.5 15 0.0005 18.2 1.1 12 224-235 7-18 (36)
33 2elp_A Zinc finger protein 406 35.5 15 0.00051 18.4 1.2 12 224-235 7-18 (37)
34 2m0d_A Zinc finger and BTB dom 35.2 14 0.00048 17.0 1.0 11 226-236 3-13 (30)
35 2elq_A Zinc finger protein 406 33.8 16 0.00056 18.0 1.2 14 223-236 6-19 (36)
36 1njq_A Superman protein; zinc- 33.7 15 0.00051 18.7 1.0 12 224-235 4-15 (39)
37 2els_A Zinc finger protein 406 33.6 16 0.00055 18.1 1.1 12 224-235 7-18 (36)
38 2lvu_A Zinc finger and BTB dom 38.9 9.3 0.00032 17.2 0.0 11 226-236 2-12 (26)
39 1yuz_A Nigerythrin; rubrythrin 32.5 54 0.0018 24.9 4.3 22 169-190 161-182 (202)
40 2ytb_A Zinc finger protein 32; 31.7 20 0.00068 18.5 1.3 14 223-236 8-21 (42)
41 2yte_A Zinc finger protein 473 31.4 21 0.00071 18.4 1.4 13 223-235 7-19 (42)
42 1rik_A E6APC1 peptide; E6-bind 31.2 16 0.00053 16.8 0.7 11 226-236 2-12 (29)
43 1ard_A Yeast transcription fac 31.0 18 0.0006 16.5 0.9 10 226-235 2-11 (29)
44 2czr_A TBP-interacting protein 30.6 14 0.00049 27.5 0.7 13 227-239 155-167 (226)
45 2epv_A Zinc finger protein 268 30.4 19 0.00065 19.0 1.1 13 223-235 9-21 (44)
46 2kfq_A FP1; protein, de novo p 30.1 17 0.00059 17.5 0.8 11 226-236 2-12 (32)
47 2eos_A B-cell lymphoma 6 prote 30.0 22 0.00075 18.4 1.3 14 223-236 8-21 (42)
48 1paa_A Yeast transcription fac 29.4 19 0.00066 16.6 0.9 11 226-236 2-12 (30)
49 2emg_A Zinc finger protein 484 29.4 23 0.00079 18.7 1.4 14 223-236 9-22 (46)
50 2el5_A Zinc finger protein 268 29.3 21 0.00072 18.4 1.2 13 223-235 7-19 (42)
51 2en2_A B-cell lymphoma 6 prote 29.2 20 0.00069 18.5 1.1 14 223-236 8-21 (42)
52 2epc_A Zinc finger protein 32; 28.6 22 0.00074 18.3 1.1 14 223-236 8-21 (42)
53 2enf_A Zinc finger protein 347 28.2 25 0.00086 18.6 1.4 13 223-235 9-21 (46)
54 2eon_A ZFP-95, zinc finger pro 27.8 26 0.0009 18.6 1.4 14 223-236 9-22 (46)
55 2ept_A Zinc finger protein 32; 27.7 23 0.0008 18.1 1.1 14 223-236 7-20 (41)
56 2m0f_A Zinc finger and BTB dom 27.7 19 0.00065 16.3 0.7 10 226-235 2-11 (29)
57 2m0e_A Zinc finger and BTB dom 27.2 21 0.00073 16.1 0.8 10 226-235 2-11 (29)
58 3iuf_A Zinc finger protein UBI 27.0 24 0.00082 19.2 1.1 13 223-235 4-16 (48)
59 2en7_A Zinc finger protein 268 27.0 24 0.00084 18.3 1.2 13 223-235 9-21 (44)
60 1klr_A Zinc finger Y-chromosom 27.0 24 0.00082 16.0 1.0 11 226-236 2-12 (30)
61 2eou_A Zinc finger protein 473 27.0 25 0.00086 18.4 1.2 14 223-236 9-22 (44)
62 2em6_A Zinc finger protein 224 26.9 28 0.00094 18.4 1.4 14 223-236 9-22 (46)
63 2yu5_A Zinc finger protein 473 26.9 25 0.00084 18.4 1.2 13 223-235 9-21 (44)
64 2ep1_A Zinc finger protein 484 26.8 26 0.0009 18.4 1.3 13 223-235 9-21 (46)
65 2lvr_A Zinc finger and BTB dom 32.8 13 0.00046 17.2 0.0 11 226-236 3-13 (30)
66 2eq1_A Zinc finger protein 347 26.5 25 0.00087 18.5 1.2 14 223-236 9-22 (46)
67 2yth_A Zinc finger protein 224 26.5 26 0.0009 18.5 1.2 14 223-236 9-22 (46)
68 2emi_A Zinc finger protein 484 26.2 26 0.00088 18.5 1.2 13 223-235 9-21 (46)
69 2enh_A Zinc finger protein 28 26.1 27 0.00092 18.5 1.2 14 223-236 9-22 (46)
70 2eof_A Zinc finger protein 268 26.1 25 0.00086 18.3 1.1 13 223-235 9-21 (44)
71 2yti_A Zinc finger protein 347 26.0 28 0.00094 18.4 1.3 14 223-236 9-22 (46)
72 2en9_A Zinc finger protein 28 26.0 28 0.00097 18.4 1.3 14 223-236 9-22 (46)
73 2eq2_A Zinc finger protein 347 25.9 27 0.00093 18.4 1.2 14 223-236 9-22 (46)
74 2emj_A Zinc finger protein 28 25.9 26 0.00089 18.5 1.2 14 223-236 9-22 (46)
75 2yrm_A B-cell lymphoma 6 prote 25.9 29 0.00098 18.1 1.3 14 223-236 7-20 (43)
76 2eoh_A Zinc finger protein 28 25.8 27 0.00093 18.5 1.2 14 223-236 9-22 (46)
77 2em4_A Zinc finger protein 28 25.7 25 0.00085 18.6 1.0 14 223-236 9-22 (46)
78 1yfu_A 3-hydroxyanthranilate-3 25.6 8.7 0.0003 28.6 -1.2 51 178-238 121-171 (174)
79 2emz_A ZFP-95, zinc finger pro 25.4 29 0.00099 18.3 1.3 13 223-235 9-21 (46)
80 1rim_A E6APC2 peptide; E6-bind 25.2 24 0.00083 17.1 0.9 10 226-235 2-11 (33)
81 2eor_A Zinc finger protein 224 25.2 27 0.00091 18.4 1.1 14 223-236 9-22 (46)
82 2eom_A ZFP-95, zinc finger pro 25.2 29 0.00098 18.4 1.2 13 223-235 9-21 (46)
83 2yts_A Zinc finger protein 484 25.0 28 0.00095 18.3 1.2 13 223-235 9-21 (46)
84 2lvt_A Zinc finger and BTB dom 30.9 15 0.00052 16.9 0.0 11 226-236 2-12 (29)
85 2emb_A Zinc finger protein 473 24.9 27 0.00091 18.2 1.0 14 223-236 9-22 (44)
86 2ytp_A Zinc finger protein 484 24.8 28 0.00094 18.4 1.1 14 223-236 9-22 (46)
87 2yrj_A Zinc finger protein 473 24.8 28 0.00096 18.3 1.1 14 223-236 9-22 (46)
88 1yui_A GAGA-factor; complex (D 24.7 27 0.00091 19.5 1.1 13 223-235 21-33 (54)
89 2eow_A Zinc finger protein 347 24.7 28 0.00095 18.3 1.1 13 223-235 9-21 (46)
90 2eoj_A Zinc finger protein 268 24.6 23 0.00079 18.5 0.8 13 223-235 9-21 (44)
91 2emx_A Zinc finger protein 268 24.6 29 0.001 18.1 1.2 14 223-236 7-20 (44)
92 3ga8_A HTH-type transcriptiona 24.6 27 0.00094 21.9 1.2 45 179-236 2-46 (78)
93 2ep3_A Zinc finger protein 484 24.5 29 0.00098 18.3 1.1 14 223-236 9-22 (46)
94 2eov_A Zinc finger protein 484 24.4 33 0.0011 18.0 1.4 14 223-236 9-22 (46)
95 2eop_A Zinc finger protein 268 24.4 32 0.0011 18.1 1.3 14 223-236 9-22 (46)
96 2em0_A Zinc finger protein 224 24.4 31 0.0011 18.2 1.3 14 223-236 9-22 (46)
97 2em3_A Zinc finger protein 28 24.3 29 0.001 18.3 1.2 13 223-235 9-21 (46)
98 2yso_A ZFP-95, zinc finger pro 24.2 28 0.00096 18.4 1.1 14 223-236 9-22 (46)
99 2eml_A Zinc finger protein 28 24.2 29 0.001 18.3 1.2 14 223-236 9-22 (46)
100 2eoo_A ZFP-95, zinc finger pro 24.2 29 0.001 18.3 1.1 13 223-235 9-21 (46)
101 2epr_A POZ-, at HOOK-, and zin 24.2 30 0.001 18.6 1.2 12 223-234 37-48 (48)
102 2elz_A Zinc finger protein 224 24.1 32 0.0011 18.1 1.3 14 223-236 9-22 (46)
103 2en3_A ZFP-95, zinc finger pro 23.8 30 0.001 18.2 1.1 13 223-235 9-21 (46)
104 2emk_A Zinc finger protein 28 23.8 34 0.0012 18.0 1.4 14 223-236 9-22 (46)
105 2ytq_A Zinc finger protein 268 23.7 34 0.0012 18.0 1.4 14 223-236 9-22 (46)
106 2emh_A Zinc finger protein 484 23.6 29 0.001 18.3 1.1 13 223-235 9-21 (46)
107 2eoz_A Zinc finger protein 473 23.6 24 0.00082 18.7 0.7 13 223-235 9-21 (46)
108 2yto_A Zinc finger protein 484 23.6 31 0.0011 18.2 1.2 13 223-235 9-21 (46)
109 2el6_A Zinc finger protein 268 23.5 30 0.001 18.2 1.1 14 223-236 9-22 (46)
110 2epz_A Zinc finger protein 28 23.5 33 0.0011 18.0 1.3 14 223-236 9-22 (46)
111 2ely_A Zinc finger protein 224 23.5 34 0.0012 18.0 1.3 14 223-236 9-22 (46)
112 3o9x_A Uncharacterized HTH-typ 23.3 34 0.0012 23.6 1.6 45 179-236 2-46 (133)
113 2eq3_A Zinc finger protein 347 23.3 25 0.00086 18.5 0.7 13 223-235 9-21 (46)
114 2epw_A Zinc finger protein 268 23.3 31 0.0011 18.1 1.1 13 223-235 9-21 (46)
115 2epx_A Zinc finger protein 28 23.3 34 0.0012 18.0 1.3 14 223-236 9-22 (47)
116 2emf_A Zinc finger protein 484 23.2 31 0.0011 18.2 1.1 14 223-236 9-22 (46)
117 2ytf_A Zinc finger protein 268 23.2 31 0.0011 18.1 1.1 13 223-235 9-21 (46)
118 2em2_A Zinc finger protein 28 23.1 32 0.0011 18.2 1.1 14 223-236 9-22 (46)
119 2eox_A Zinc finger protein 473 23.1 25 0.00085 18.4 0.7 13 223-235 9-21 (44)
120 2ytn_A Zinc finger protein 347 23.0 34 0.0012 18.0 1.3 14 223-236 9-22 (46)
121 1loi_A Cyclic 3',5'-AMP specif 23.0 16 0.00055 17.1 -0.1 9 227-235 6-14 (26)
122 2ema_A Zinc finger protein 347 23.0 31 0.0011 18.2 1.1 13 223-235 9-21 (46)
123 2eoy_A Zinc finger protein 473 22.9 31 0.0011 18.2 1.1 13 223-235 9-21 (46)
124 2ytj_A Zinc finger protein 484 22.9 32 0.0011 18.1 1.2 14 223-236 9-22 (46)
125 2emy_A Zinc finger protein 268 22.9 32 0.0011 18.1 1.1 14 223-236 9-22 (46)
126 2ytr_A Zinc finger protein 347 22.7 34 0.0012 17.9 1.3 14 223-236 9-22 (46)
127 2em7_A Zinc finger protein 224 22.5 33 0.0011 18.1 1.1 13 223-235 9-21 (46)
128 2el4_A Zinc finger protein 268 22.4 34 0.0011 18.0 1.2 14 223-236 9-22 (46)
129 2eoq_A Zinc finger protein 224 22.4 35 0.0012 17.9 1.3 14 223-236 9-22 (46)
130 2eq4_A Zinc finger protein 224 22.2 35 0.0012 17.9 1.2 14 223-236 9-22 (46)
131 2epu_A Zinc finger protein 32; 22.1 27 0.00093 18.4 0.7 13 223-235 9-21 (45)
132 2ytm_A Zinc finger protein 28 22.0 36 0.0012 18.0 1.2 14 223-236 9-22 (46)
133 2emp_A Zinc finger protein 347 22.0 34 0.0012 18.0 1.1 13 223-235 9-21 (46)
134 2ytk_A Zinc finger protein 347 21.9 34 0.0012 18.0 1.1 13 223-235 9-21 (46)
135 2yu8_A Zinc finger protein 347 21.8 34 0.0012 18.0 1.1 13 223-235 9-21 (46)
136 2eme_A Zinc finger protein 473 21.6 35 0.0012 17.9 1.1 14 223-236 9-22 (46)
137 2eq0_A Zinc finger protein 347 21.5 35 0.0012 18.0 1.1 13 223-235 9-21 (46)
138 2em8_A Zinc finger protein 224 21.4 36 0.0012 17.9 1.2 14 223-236 9-22 (46)
139 1kdl_A YOPD protein; yersinia, 21.3 49 0.0017 15.9 1.4 8 33-40 3-10 (26)
140 2ene_A Zinc finger protein 347 21.3 34 0.0012 18.0 1.0 14 223-236 9-22 (46)
141 2ytg_A ZFP-95, zinc finger pro 21.2 36 0.0012 17.9 1.1 14 223-236 9-22 (46)
142 4gzn_C ZFP-57, zinc finger pro 21.1 35 0.0012 20.0 1.1 13 223-235 29-41 (60)
143 2ep2_A Zinc finger protein 484 21.0 37 0.0013 17.8 1.1 13 223-235 9-21 (46)
144 2ep0_A Zinc finger protein 28 21.0 37 0.0013 17.8 1.1 14 223-236 9-22 (46)
145 2ytt_A Zinc finger protein 473 21.0 40 0.0014 17.7 1.3 14 223-236 9-22 (46)
146 2en8_A Zinc finger protein 224 20.9 35 0.0012 17.9 1.0 14 223-236 9-22 (46)
147 2emm_A ZFP-95, zinc finger pro 20.8 37 0.0013 17.8 1.1 14 223-236 9-22 (46)
148 2em9_A Zinc finger protein 224 20.7 38 0.0013 17.8 1.1 14 223-236 9-22 (46)
149 2epq_A POZ-, at HOOK-, and zin 20.6 31 0.0011 18.1 0.7 13 223-235 7-19 (45)
150 2w0t_A Lethal(3)malignant brai 20.4 31 0.001 19.2 0.6 16 225-240 5-20 (43)
151 2enc_A Zinc finger protein 224 20.2 39 0.0013 17.7 1.1 13 223-235 9-21 (46)
152 3qt1_I DNA-directed RNA polyme 20.1 49 0.0017 23.4 1.8 16 178-193 45-60 (133)
No 1
>2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-47 Score=331.78 Aligned_cols=234 Identities=23% Similarity=0.383 Sum_probs=179.3
Q ss_pred CCCCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcC----CCCCCcchhhHHHHHHHHHHHHHhcccCccccCcH
Q 025024 17 PEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSN----NKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPK 92 (259)
Q Consensus 17 ~~~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~----~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~ 92 (259)
+..++++||.|+||||||||+||+|+++|+|+++++..... ...+......++.+|+.||..||.+.. ..++|.
T Consensus 3 ~~~~g~~GL~NlGNTCYmNSvLQ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~~~l~~~~~--~~i~P~ 80 (367)
T 2y6e_A 3 HIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR 80 (367)
T ss_dssp -CCTTCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTTCGGGGCCSSCTTSCTTHHHHHHHHHHHHHTSSSC--SEECCH
T ss_pred CCCCCCcCCccCCcchHHHHHHHHHHCCHHHHHHHHcCchhhhccccCCCCcchHHHHHHHHHHHHHHcCCC--CCcCHH
Confidence 34567999999999999999999999999999999875322 112333456899999999999998743 469999
Q ss_pred HHHHHHHhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCcccccccccc
Q 025024 93 RFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNF 172 (259)
Q Consensus 93 ~l~~~~~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF 172 (259)
.|+.+++...+.|.+++||||||||.+|||.||++++............... ..........|........++|.++|
T Consensus 81 ~~~~~l~~~~~~f~~~~QqDA~Efl~~LLd~L~~~l~~~~~~~~~~~~~~~g--~~~~~~a~~~w~~~~~~~~s~i~~~F 158 (367)
T 2y6e_A 81 MFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANG--RPDAVVAKEAWENHRLRNDSVIVDTF 158 (367)
T ss_dssp HHHHHHHHHCGGGCSSSCCCHHHHHHHHHHHHHHHTCSCSSCCCCCCCCCCS--CCHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhccCCccccccccC--CchhHHHHHHHHHHHHhcCCcccccc
Confidence 9999999999999999999999999999999999886533222110000000 00000000112222234568899999
Q ss_pred ceeeeeeeeeccCCCccccccCceEeeeecCCC-------------------CCHHHHHhhccccceeCCCCccccccCC
Q 025024 173 QGILTNETRCLRCETVTARDETFFDLSLDIEQN-------------------SSITSCLKNFSSTETLNAEDKFFCDKCC 233 (259)
Q Consensus 173 ~g~~~~~i~C~~C~~~s~~~e~f~~L~L~i~~~-------------------~sL~~~L~~~~~~e~l~~~~~~~C~~C~ 233 (259)
+|+++++++|..|++++.++|+|+.|+|+||.. .+|++||+.|+++|.++|+|+|+|++|+
T Consensus 159 ~G~l~s~~~C~~C~~~s~~~e~f~~LsL~ip~~~~~~~~~~~~~~~~~~~~~~sL~~~L~~f~~~E~l~~~~~~~C~~C~ 238 (367)
T 2y6e_A 159 HGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEGPMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCK 238 (367)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEESSEEEECCC-------------------CEEHHHHHHHHTSCEECCC-CCEEETTTT
T ss_pred CcEEeeeEEeCCCCCEeeeEccCeeEEeeCCCCcCCcceeeeeccccccCCCCCHHHHHHHhcccccCCCCCCccCCCCC
Confidence 999999999999999999999999999999853 4899999999999999999999999999
Q ss_pred Ccceeeeeeccccccccchheecc
Q 025024 234 RLVIYTYICKSSVTDISCIVVVLH 257 (259)
Q Consensus 234 ~~~~~~~~~~~~~~~~p~~l~i~h 257 (259)
+++.+++ +..+..+|++| +||
T Consensus 239 ~~~~a~K--~~~i~~lP~vL-~i~ 259 (367)
T 2y6e_A 239 KHQQATK--KFDLWSLPKIL-VVH 259 (367)
T ss_dssp EEECCEE--EEEEEECCSEE-EEE
T ss_pred CCceEEE--EEEEecCCcEE-EEE
Confidence 9999887 44556666654 444
No 2
>3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} SCOP: d.3.1.9 PDB: 2hd5_A 3v6c_A 3v6e_A 2ibi_A
Probab=100.00 E-value=7.3e-46 Score=318.69 Aligned_cols=234 Identities=25% Similarity=0.391 Sum_probs=182.3
Q ss_pred CCCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcC--CCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHH
Q 025024 18 EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSN--NKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFV 95 (259)
Q Consensus 18 ~~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~--~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~ 95 (259)
..++++||.|+||||||||+||+|+++|+|+++++..... .........+++++|..||..||... ....++|..|+
T Consensus 5 ~~~g~~GL~N~GNtCY~NsvLQ~L~~~~~~r~~~l~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~-~~~~~~p~~~~ 83 (348)
T 3nhe_A 5 SAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSS-PNDVVSPSEFK 83 (348)
T ss_dssp -CCSCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTTGGGGTSCSSCCTTHHHHHHHHHHHHHHTTCC-TTCEECCHHHH
T ss_pred CCCCCCCCCcCCccHHHHHHHHHHhcCHHHHHHHhcchhhHhhccCCCcccHHHHHHHHHHHHHHcCC-CCCccCHHHHH
Confidence 3467999999999999999999999999999999875332 11233456789999999999999642 34479999999
Q ss_pred HHHHhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCcccccccccccee
Q 025024 96 QRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGI 175 (259)
Q Consensus 96 ~~~~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~ 175 (259)
.+++...+.|.+++||||+|||.+||+.||++++.............. ...........|........++|.++|+|+
T Consensus 84 ~~l~~~~~~f~~~~QqDa~Efl~~lLd~L~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~i~~~F~g~ 161 (348)
T 3nhe_A 84 TQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLD--HLPDDEKGRQMWRKYLEREDSRIGDLFVGQ 161 (348)
T ss_dssp HHHHHHSGGGSSSCCBCHHHHHHHHHHHHHHHHCSCSSCCCCCCCCCT--TSCHHHHHHHHHHHHHTTCCCHHHHHHCEE
T ss_pred HHHHHhhhhhCCCCccCHHHHHHHHHHHHHHHHhhcccCCCCCccccc--cCCchHHHHHHHHHHHhhcCCccccccceE
Confidence 999999999999999999999999999999998654322221111000 000000011122233345668899999999
Q ss_pred eeeeeeeccCCCccccccCceEeeeecCCC----CCHHHHHhhccccceeCCCCccccccCCCcceeeeeeccccccccc
Q 025024 176 LTNETRCLRCETVTARDETFFDLSLDIEQN----SSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKSSVTDISC 251 (259)
Q Consensus 176 ~~~~i~C~~C~~~s~~~e~f~~L~L~i~~~----~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~~~~~~p~ 251 (259)
+.++++|..|++++.++|+|+.|+|+|+.. .+|+++|+.|+++|.++|+++|+|++|++++.+.+ +..+..+|+
T Consensus 162 ~~~~~~C~~C~~~s~~~e~f~~LsL~i~~~~~~~~sl~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~k--~~~i~~lP~ 239 (348)
T 3nhe_A 162 LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIK--KFSIQRFPK 239 (348)
T ss_dssp EEEEEEETTTCCEEEEEEEESSEEECCCSSCSSCEEHHHHHHHHHSCEEECGGGCCEETTTTEECCEEE--EEEEEECCS
T ss_pred EEEEEEcCCCCCEeeeeccceEEeeeCCCcccCCCCHHHHHHHhcCceEecCCCceECCCCCCcccEEE--EEEeecCCc
Confidence 999999999999999999999999999874 49999999999999999999999999999999888 344555555
Q ss_pred hheecc
Q 025024 252 IVVVLH 257 (259)
Q Consensus 252 ~l~i~h 257 (259)
+| +||
T Consensus 240 vL-~i~ 244 (348)
T 3nhe_A 240 IL-VLH 244 (348)
T ss_dssp EE-EEE
T ss_pred eE-EEE
Confidence 54 555
No 3
>3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A
Probab=100.00 E-value=1.3e-45 Score=317.96 Aligned_cols=234 Identities=28% Similarity=0.398 Sum_probs=174.0
Q ss_pred CCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcC-CCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHHHHH
Q 025024 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSN-NKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRL 98 (259)
Q Consensus 20 ~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~-~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~~~~ 98 (259)
+|++||.|+||||||||+||+|+++|+|+++++..... .........+++.+|+.+|..||..... ..++|..|+.++
T Consensus 1 TG~~GL~N~GNtCY~NSvLQ~L~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~-~~v~p~~~~~~l 79 (355)
T 3i3t_A 1 SGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSC-EAVNPTRFRAVF 79 (355)
T ss_dssp --CCCBCCCSSTHHHHHHHHHHHTCHHHHHHHHHTTHHHHC------CHHHHHHHHHHHHTSSCSSC-CCBCCHHHHHHH
T ss_pred CCCcCcEECCcchHHHHHHHHHhCCHHHHHHHHhchHHHhcCCCCchhHHHHHHHHHHHHHhcCCCC-CcccHHHHHHHH
Confidence 46999999999999999999999999999999874221 1122233457999999999999987542 369999999999
Q ss_pred HhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccc--cCCCCCC-----------CCCCCCCCCccc
Q 025024 99 KKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEK--TANGPTN-----------GLANGVRKEPLV 165 (259)
Q Consensus 99 ~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------~~~~~~~~~~~~ 165 (259)
+...+.|.++.||||+|||.+||+.||++++...+............. ....... ...|........
T Consensus 80 ~~~~~~f~~~~QqDA~Efl~~LLd~L~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (355)
T 3i3t_A 80 QKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED 159 (355)
T ss_dssp HHHCGGGCSSCCCBHHHHHHHHHHHHHHHHCCC----------------------------CCHHHHHHHHHHHHHHHCC
T ss_pred HHhChhhCCCCccCHHHHHHHHHHHHHHHHhhhccCCCcccccCcccCccccccccccCCCCCHHHHHHHHHHHhhhccC
Confidence 999999999999999999999999999998754433221111100000 0000000 001112223456
Q ss_pred cccccccceeeeeeeeeccCCCccccccCceEeeeecCCC------CCHHHHHhhccccceeCCCCccccccCCCcceee
Q 025024 166 TWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQN------SSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYT 239 (259)
Q Consensus 166 s~i~~lF~g~~~~~i~C~~C~~~s~~~e~f~~L~L~i~~~------~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~ 239 (259)
++|.++|+|++.+.++|..|++++.+.|+|+.|+|+||.. .+|+++|+.|+++|.++|+|+|+|++|++++.++
T Consensus 160 s~i~~~F~g~~~~~~~C~~C~~~s~~~e~f~~lsl~i~~~~~~~~~~sl~~~L~~~~~~e~l~~~n~~~C~~C~~~~~a~ 239 (355)
T 3i3t_A 160 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRST 239 (355)
T ss_dssp SHHHHHHCEEEEEEEEETTTCCEEEEEEEESSEEECCCC-------CBHHHHHHHHHCCEEECGGGCCCCSSSCCCCCEE
T ss_pred CcccccccEEEEeeEEeCCCCCCceeeccceeecccCCccccccCccCHHHHHHHhCCccccCCCCCeeCCCCCCccceE
Confidence 8899999999999999999999999999999999999863 4999999999999999999999999999999999
Q ss_pred eeeccccccccchheecc
Q 025024 240 YICKSSVTDISCIVVVLH 257 (259)
Q Consensus 240 ~~~~~~~~~~p~~l~i~h 257 (259)
+ +..+..+|++| ++|
T Consensus 240 k--~~~i~~lP~vL-~i~ 254 (355)
T 3i3t_A 240 K--KLTVQRFPRIL-VLH 254 (355)
T ss_dssp E--EEEEEECCSEE-EEE
T ss_pred E--EEEcccCChhe-EEE
Confidence 8 34455566654 445
No 4
>2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A
Probab=100.00 E-value=8.8e-45 Score=317.04 Aligned_cols=232 Identities=25% Similarity=0.409 Sum_probs=179.1
Q ss_pred CCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcC----CCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHH
Q 025024 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSN----NKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRF 94 (259)
Q Consensus 19 ~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~----~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l 94 (259)
+++++||.|+||||||||+||+|+++|+|+++++..... ..........++.+|..++..||.+.. ..++|..|
T Consensus 59 ~~g~~GL~NlGNTCYmNSvLQ~L~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~--~~i~P~~f 136 (396)
T 2gfo_A 59 GPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQY--RYISPKDF 136 (396)
T ss_dssp STTCCEECCSSSCHHHHHHHHHHHTCHHHHHHHHTTTHHHHCCTTCTTSCTTHHHHHHHHHHHHHHHSCE--EEECCHHH
T ss_pred CCCcccccccCCchhHhHHHHHhhCCHHHHHHHHcCcchhhhcccCCCCcccHHHHHHHHHHHHHHcCCC--ceECHHHH
Confidence 467999999999999999999999999999999864221 112223346799999999999998753 46999999
Q ss_pred HHHHHhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCccccccccccce
Q 025024 95 VQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQG 174 (259)
Q Consensus 95 ~~~~~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g 174 (259)
+.+++...+.|.++.||||+|||.+|||.||+++.....+...... ..+...........|........++|.++|+|
T Consensus 137 ~~~l~~~~~~f~~~~QqDA~EFl~~LLd~L~~el~~~~~~~~~~~~--~~~~~~~~~~a~~~w~~~~~~~~s~I~~lF~G 214 (396)
T 2gfo_A 137 KITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEE--NNDHLDDFKAAEHAWQKHKQLNESIIVALFQG 214 (396)
T ss_dssp HHHHHHHCGGGSSSSCCCHHHHHHHHHHHHHHHHCCCCC-----------TTSCHHHHHHHHHHHHHHHCCSHHHHHHCE
T ss_pred HHHHHHhchhhcCCCCCChHHHHHHHHHHHHHHHhhhccccccccc--cccccchhhHHHHHHHHhhhccCCccchhhCc
Confidence 9999999999999999999999999999999998643211110000 00000000000111222233456899999999
Q ss_pred eeeeeeeeccCCCccccccCceEeeeecCCC--CCHHHHHhhccccceeCCCCccccccCCCcceeeeeeccccccccch
Q 025024 175 ILTNETRCLRCETVTARDETFFDLSLDIEQN--SSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKSSVTDISCI 252 (259)
Q Consensus 175 ~~~~~i~C~~C~~~s~~~e~f~~L~L~i~~~--~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~~~~~~p~~ 252 (259)
+++++++|..|++++.++|+|+.|+|+||.. .+|++||+.|+++|.++|+|+|+|++|++++.+++ +..+..+|++
T Consensus 215 ~l~s~i~C~~C~~~s~~~e~f~~LsL~ip~~~~~sL~~~L~~f~~~E~l~~~n~~~C~~C~~~~~a~k--~~~i~~lP~v 292 (396)
T 2gfo_A 215 QFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLK--KIEIWKLPPV 292 (396)
T ss_dssp EEEEEEEETTTCCEEEEEEEESSEEECCSCSSEEEHHHHHHHHTSCEEECSTTCEEETTTTEEECEEE--EEEEEECCSE
T ss_pred EEEEEEEeCCCCceecccccceeeeecccccccCCHHHHHHHhCCcccccCCcccccCCcccccceEE--EEEEecCCcE
Confidence 9999999999999999999999999999864 58999999999999999999999999999998887 3455666665
Q ss_pred heecc
Q 025024 253 VVVLH 257 (259)
Q Consensus 253 l~i~h 257 (259)
|+||
T Consensus 293 -Liih 296 (396)
T 2gfo_A 293 -LLVH 296 (396)
T ss_dssp -EEEE
T ss_pred -EEEE
Confidence 4455
No 5
>1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A
Probab=100.00 E-value=4.5e-42 Score=295.79 Aligned_cols=197 Identities=21% Similarity=0.394 Sum_probs=165.4
Q ss_pred CCCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcCCCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHHHH
Q 025024 18 EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQR 97 (259)
Q Consensus 18 ~~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~~~ 97 (259)
+.++++||.|+||||||||+||+|+++|+|+++++..... ......++.++|+++|..|+.+. .++.|..++..
T Consensus 2 ~~~g~~GL~NlGnTCYmNSvLQ~L~~~~~~r~~~~~~~~~---~~~~~~~~~~~l~~lf~~l~~~~---~~~~~~~l~~~ 75 (353)
T 1nb8_A 2 KHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTE---GDDSSKSVPLALQRVFYELQHSD---KPVGTKKLTKS 75 (353)
T ss_dssp CCSSCCCBCCCSTTTTHHHHHHHHHTCHHHHHHHHTSCCT---TSCTTTCHHHHHHHHHHHHHHCS---SCBCCHHHHHH
T ss_pred CCCCCCCcccCchhhHHHHHHHHHHCCHHHHHHHHhCCCC---CCcccccHHHHHHHHHHHHhhcC---CCCCCHHHHhh
Confidence 3467999999999999999999999999999998764221 12334578999999999999864 35889999887
Q ss_pred HHhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCccccccccccceeee
Q 025024 98 LKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILT 177 (259)
Q Consensus 98 ~~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~~~ 177 (259)
++ ++.|.++.||||+||+.+||+.||+++... ...++|.++|+|++.
T Consensus 76 ~~--~~~~~~~~QqDA~EFl~~LLd~L~~~~~~~-------------------------------~~~s~i~~~F~g~~~ 122 (353)
T 1nb8_A 76 FG--WETLDSFMQHDVQELCRVLLDNVENKMKGT-------------------------------CVEGTIPKLFRGKMV 122 (353)
T ss_dssp HT--CCBTTTTTTSCHHHHHHHHHHHHHHHTTTS-------------------------------TTTTHHHHHHCEEEE
T ss_pred cC--CCCCCcccchhHHHHHHHHHHHHHHHhcCC-------------------------------CccchhhhhceeEEE
Confidence 75 367999999999999999999999876421 123679999999999
Q ss_pred eeeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcceeeeeeccccccccchheecc
Q 025024 178 NETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKSSVTDISCIVVVLH 257 (259)
Q Consensus 178 ~~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~~~~~~p~~l~i~h 257 (259)
++++|..|++.+.+.|+|+.|+|+|++..+|+++|+.|+.+|.++|+++|.|+.|+ ++.+++ +..+..+|++| ++|
T Consensus 123 ~~i~C~~C~~~s~~~e~f~~LsL~i~~~~~l~~~L~~~~~~E~l~~~~~~~C~~c~-~~~a~k--~~~i~~lP~vL-~i~ 198 (353)
T 1nb8_A 123 SYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHG-LQEAEK--GVKFLTLPPVL-HLQ 198 (353)
T ss_dssp EEEEESSSCCEEEEEEEESCEEECCTTCSBHHHHHHHHTCCEEECTTTCEECGGGC-EECEEE--EEEESCCCSEE-EEE
T ss_pred EEEEeccCCCeeceeeeeEEEEEEECCCcchHHHHHHhhCccccCCCccccCCcCc-cEeeEE--EEEhhcCCCce-EEE
Confidence 99999999999999999999999999989999999999999999999999999996 455665 34456666655 555
No 6
>2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A
Probab=100.00 E-value=1.9e-41 Score=296.97 Aligned_cols=216 Identities=22% Similarity=0.273 Sum_probs=164.6
Q ss_pred CCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcC--CCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHHH
Q 025024 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSN--NKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQ 96 (259)
Q Consensus 19 ~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~--~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~~ 96 (259)
...++||.|+||||||||+||+|+++|+|+++++..... .........+++++|+.||..|+.+. ..++|..|+.
T Consensus 11 ~~~~~GL~NlGNTCYmNSvLQ~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lf~~l~~~~---~~v~P~~~~~ 87 (404)
T 2ayn_A 11 MELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTS---SSIPPIILLQ 87 (404)
T ss_dssp CCCCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHC---SEECCHHHHH
T ss_pred cCCCCCcccCCcccHHHHHHHHHHcCHHHHHHHHhcccccccCCCCCcccHHHHHHHHHHHHHhcCC---CcCChHHHHH
Confidence 345899999999999999999999999999999886433 11122346789999999999999873 4699999999
Q ss_pred HHHhhccccC------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCcccccccc
Q 025024 97 RLKKQNELFR------SYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170 (259)
Q Consensus 97 ~~~~~~~~f~------~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~ 170 (259)
+++...+.|. ++.||||||||.+||+.||+++...... ... .......|........++|++
T Consensus 88 ~l~~~~~~f~~~~~~~~~~QqDA~Efl~~lLd~L~~~~~~~~~~-------~~~-----e~~~~~~~~~~~~~~~s~i~~ 155 (404)
T 2ayn_A 88 FLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDD-------SVK-----ETDSSSASAATPSKKKSLIDQ 155 (404)
T ss_dssp HHHHHCGGGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------------------CCHHHH
T ss_pred HHHHhCchhhccccCCCccccCHHHHHHHHHHHHHHHhccccCC-------ccc-----ccchhhhhhhhccccCchhhh
Confidence 9999999887 5899999999999999999887432100 000 011122334444556789999
Q ss_pred ccceeeeeeeeeccCCCcc--ccccCceEeeeecCCC-CCHHHHHhhccccceeCCCCccccccCCCcceeeeeeccccc
Q 025024 171 NFQGILTNETRCLRCETVT--ARDETFFDLSLDIEQN-SSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKSSVT 247 (259)
Q Consensus 171 lF~g~~~~~i~C~~C~~~s--~~~e~f~~L~L~i~~~-~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~~~~ 247 (259)
+|+|++.++++|..|++++ .++|+|+.|+|+|+.. .+|+++|+.++. |.+. ++|++|++.+.+++ +..+.
T Consensus 156 ~F~G~l~s~i~C~~C~~~s~s~~~e~f~~Lsl~i~~~~~~l~~~L~~~~~-e~l~----~~c~~c~~~~~~~k--~~~i~ 228 (404)
T 2ayn_A 156 FFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQ-EEIT----KQSPTLQRNALYIK--SSKIS 228 (404)
T ss_dssp HTCEEEEEEEEESSSCCCCCBCCEEEESSEEEECSSSCCBHHHHHHHTTE-ECCC----CEETTTTEECCEEE--EEEEE
T ss_pred hccEEEEEEEEecCCCCccCceeeccCceEEeecCCCcccHHHHHHHhcc-ccee----ecchhhCCccceee--eeeHh
Confidence 9999999999999999995 7899999999999975 589999999996 5554 89999999888887 34556
Q ss_pred cccchheecc
Q 025024 248 DISCIVVVLH 257 (259)
Q Consensus 248 ~~p~~l~i~h 257 (259)
.+|++| +||
T Consensus 229 ~lP~vL-~i~ 237 (404)
T 2ayn_A 229 RLPAYL-TIQ 237 (404)
T ss_dssp ECCSSE-EEE
T ss_pred hCCCce-EEE
Confidence 666655 455
No 7
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=318.96 Aligned_cols=198 Identities=22% Similarity=0.363 Sum_probs=167.8
Q ss_pred CCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcCC--CCCCcchhhHHHHHHHHHHHHHhcc--------------
Q 025024 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNN--KNLGDAEENLLTCLADLFTQIRAQK-------------- 83 (259)
Q Consensus 20 ~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~~--~~~~~~~~~~~~~l~~l~~~l~~~~-------------- 83 (259)
++++||.|+||||||||+||+|+++|+|+++++...... ........++.++|++||..||...
T Consensus 342 ~G~~GL~NlGNTCYmNSvLQ~L~~~p~fr~~ll~~~~~~~~~~~~~~~~~l~~~l~~L~~~L~s~~~s~~~~~~~~~~~~ 421 (854)
T 3ihp_A 342 PGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPVPESGDGERV 421 (854)
T ss_dssp TTCCCBCCCSSCHHHHHHHHHHTTSHHHHHHHTTTHHHHHHHCCSCGGGCHHHHHHHHHHHHHSCC--------------
T ss_pred CCccceEecCCceehhHHHHHHhCcHHHHHHHHhhhhhhhccccCCccccHHHHHHHHHHHHhccccccccccccccccc
Confidence 459999999999999999999999999999997532210 1344556789999999999999753
Q ss_pred ----cCccccCcHHHHHHHHhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCC
Q 025024 84 ----KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGV 159 (259)
Q Consensus 84 ----~~~~~~~p~~l~~~~~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (259)
.....++|..|+.+++..++.|.+++||||+|||.+||+.||+++..
T Consensus 422 ~~~~~~~~~isP~~f~~~l~~~~~~F~~~~QQDA~EFl~~LLd~L~~el~~----------------------------- 472 (854)
T 3ihp_A 422 PEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVERNCRS----------------------------- 472 (854)
T ss_dssp -------CCBCCHHHHHHHTTTCTTTTSSSCCBHHHHHHHHHHHHHHTCTT-----------------------------
T ss_pred cccccCCCccChHHHHHHHhhhccccccccccCHHHHHHHHHHHHHHHhcc-----------------------------
Confidence 22347999999999999999999999999999999999999987731
Q ss_pred CCCccccccccccceeeeeeeeeccCCCccccccCceEeeeecCCC--------------------------------CC
Q 025024 160 RKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQN--------------------------------SS 207 (259)
Q Consensus 160 ~~~~~~s~i~~lF~g~~~~~i~C~~C~~~s~~~e~f~~L~L~i~~~--------------------------------~s 207 (259)
.+.|.++|+|+++++++|..|++++.++++|+.|+|+||.. .+
T Consensus 473 -----~s~i~~lF~G~l~s~i~C~~C~~vs~t~e~F~~LsL~Ip~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~s 547 (854)
T 3ihp_A 473 -----SENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKMALPELVRAQVP 547 (854)
T ss_dssp -----SCCGGGGTCEEEEEEEEETTTTEEEEEEEEESEEEECCCGGGCTTHHHHHHHHHHHHHHHHTTCCCCCCCCEECC
T ss_pred -----cCCchhhcCceEEEEEEecCCCCEeEEeeeceEEEeeCCccccccccchhhhcccccccccccccccccccCCCC
Confidence 25689999999999999999999999999999999999852 49
Q ss_pred HHHHHhhccccceeCCCCccccccCCCcceeeeeeccccccccchheecc
Q 025024 208 ITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKSSVTDISCIVVVLH 257 (259)
Q Consensus 208 L~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~~~~~~p~~l~i~h 257 (259)
|++||+.|+++|.++| |+|++|++++.+++ +..+..+|++ |+||
T Consensus 548 L~dcL~~f~~~E~Le~---y~C~~C~~k~~a~K--~~~i~~lP~v-Liih 591 (854)
T 3ihp_A 548 FSSCLEAYGAPEQVDD---FWSTALQAKSVAVK--TTRFASFPDY-LVIQ 591 (854)
T ss_dssp HHHHHHHHHSCEEEEE---EEETTTTEEEEEEE--EEEESSCCSE-EEEE
T ss_pred HHHHHHHhcCceEeee---eeccccCCcceeeE--EEEeeeCCce-EEEE
Confidence 9999999999999997 99999999999998 3444555554 5555
No 8
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=100.00 E-value=1.1e-40 Score=297.98 Aligned_cols=219 Identities=23% Similarity=0.410 Sum_probs=170.6
Q ss_pred CCCCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcC-CCCCCcchhhHHHHHHHHHHHHHhcccC-------ccc
Q 025024 17 PEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSN-NKNLGDAEENLLTCLADLFTQIRAQKKK-------TGV 88 (259)
Q Consensus 17 ~~~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~-~~~~~~~~~~~~~~l~~l~~~l~~~~~~-------~~~ 88 (259)
..++|++||.|+||||||||+||+|+++|+|+++++..... .........++.++|..++..++..... ...
T Consensus 136 ~~~~G~~GL~NlGNTCYmNSvLQ~L~~~p~fr~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~~~~ 215 (476)
T 3mhs_A 136 ERRDGLSGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTST 215 (476)
T ss_dssp GGTTCCCCCCCSSSTHHHHHHHHHHHTCHHHHHHHHTTHHHHHCSSCCTTTCHHHHHHHHHHHHHSCCCC--------CC
T ss_pred cCCCCCCCCCcCCccHHHHHHHHHHhCCHHHHHHHHhcchhhhccCCCcccchHHHHHHHHHHHhhcccccccccccccc
Confidence 34578999999999999999999999999999999864332 1122344567999999999999975321 123
Q ss_pred cCcHHHHHHH---HhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCccc
Q 025024 89 IAPKRFVQRL---KKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLV 165 (259)
Q Consensus 89 ~~p~~l~~~~---~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
+.|..+...+ .+..+.|.+++||||+|||.+||+.||+++.......... +........
T Consensus 216 ~~~~~~~~~l~~~~~~~~~f~~~~QqDA~EFl~~LLd~L~~~~~~~~~~~~~~------------------~~~~~~~~~ 277 (476)
T 3mhs_A 216 NRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEV------------------SRANNKQCE 277 (476)
T ss_dssp CSCHHHHHHHHHHHHHCGGGSSSSCEEHHHHHHHHHHHHHHHHHHHCCC-------------------------CCCSCC
T ss_pred cCcchHHHHHHHHHHhccccCCCCCcCHHHHHHHHHHHHHHHHhhcccccccc------------------cccccccCC
Confidence 5666655554 4788999999999999999999999999987643221100 011112356
Q ss_pred cccccccceeeeeeeeeccCCCcc-ccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcceeeeeecc
Q 025024 166 TWVHKNFQGILTNETRCLRCETVT-ARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKS 244 (259)
Q Consensus 166 s~i~~lF~g~~~~~i~C~~C~~~s-~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~ 244 (259)
++|.++|+|+++++++|..|++++ +++++|+.|+|+|+...+|+++|+.|+++|.++|.+ |+|++|++++.+++ +.
T Consensus 278 s~i~~~F~G~l~~~~~C~~C~~~s~~~~e~f~~LsL~i~~~~sl~~~L~~~~~~E~l~~~~-~~C~~C~~~~~a~k--~~ 354 (476)
T 3mhs_A 278 CIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQDAIK--QL 354 (476)
T ss_dssp SHHHHHSCEEEEEEEECTTTCCCCEEEEEEESCEEECCTTCCBHHHHHHHHHCCEECSSCC-CEETTTTEECCCEE--EE
T ss_pred CcceeecceEEEEEEEECCCCCeeCCcccchhhhccchhhhhHHHHHHHHhcChhhccCCC-CcCCccCCcccEEE--EE
Confidence 889999999999999999999997 559999999999999999999999999999998644 99999999998887 34
Q ss_pred ccccccchheecc
Q 025024 245 SVTDISCIVVVLH 257 (259)
Q Consensus 245 ~~~~~p~~l~i~h 257 (259)
.+..+|++ |+||
T Consensus 355 ~i~~lP~v-L~i~ 366 (476)
T 3mhs_A 355 GIHKLPSV-LVLQ 366 (476)
T ss_dssp EEEEBCSE-EEEE
T ss_pred EcccCCcc-eEEE
Confidence 44555555 4555
No 9
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=293.37 Aligned_cols=197 Identities=21% Similarity=0.394 Sum_probs=162.8
Q ss_pred CCCCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcCCCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHHHH
Q 025024 18 EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQR 97 (259)
Q Consensus 18 ~~~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~~~ 97 (259)
..++++||.|+||||||||+||+|+++|+|+++++.... .......++.++|+++|..|+.+. .++.|..|+..
T Consensus 171 ~~~g~~GL~NlGnTCYmNSvLQ~L~~~~~fr~~~~~~~~---~~~~~~~~~~~~l~~lf~~l~~~~---~~~~~~~l~~~ 244 (522)
T 2f1z_A 171 KHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT---EGDDSSKSVPLALQRVFYELQHSD---KPVGTKKLTKS 244 (522)
T ss_dssp TTTSCCCBCCC--CTTHHHHHHHHHTCHHHHHHHHTCCC---CSSCTTTCHHHHHHHHHHHHHHCS---SCBCCTTHHHH
T ss_pred ccCCccceecCcccHHHHHHHHHHhccHHHHHHHhhccc---cCCcccchHHHHHHHHHHHHhcCC---CccCcHHHHhh
Confidence 347799999999999999999999999999999876422 112334578999999999999864 35889888877
Q ss_pred HHhhccccCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCccccccccccceeee
Q 025024 98 LKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILT 177 (259)
Q Consensus 98 ~~~~~~~f~~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~~~ 177 (259)
++ ++.|.++.||||+||+.+||+.||+++... ...++|.++|+|++.
T Consensus 245 ~~--~~~~~~~~QqDa~Efl~~LLd~L~~~l~~~-------------------------------~~~s~i~~lF~G~~~ 291 (522)
T 2f1z_A 245 FG--WETLDSFMQHDVQELCRVLLDNVENKMKGT-------------------------------CVEGTIPKLFRGKMV 291 (522)
T ss_dssp TC--CCTTTSSTTSCHHHHHHHHHHHHHHHHTTS-------------------------------TTTTHHHHHHCEEEE
T ss_pred cC--CccCCCcccccHHHHHHHHHHHHHhhccCC-------------------------------ccccchhhheeEEEE
Confidence 64 367899999999999999999999877421 123679999999999
Q ss_pred eeeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcceeeeeeccccccccchheecc
Q 025024 178 NETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICKSSVTDISCIVVVLH 257 (259)
Q Consensus 178 ~~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~~~~~~~p~~l~i~h 257 (259)
+.++|..|++.+.+.|+|+.|+|+|++..+|+++|+.|+.+|.++|+++|.|++|+ ++.+++ +..+..+|++| +||
T Consensus 292 s~i~C~~C~~~s~~~e~f~~LsL~i~~~~~l~~~L~~~~~~E~l~~~n~~~C~~c~-~~~a~k--~~~i~~lP~vL-~i~ 367 (522)
T 2f1z_A 292 SYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHG-LQEAEK--GVKFLTLPPVL-HLQ 367 (522)
T ss_dssp EEECCSSSCCCCCEEEEESCEEECCTTCCBHHHHHHHHTCEEEECTTSCBCCGGGC-SBCEEE--EEEESCCCSEE-EEE
T ss_pred EEEEcCCCCceeeeeeeeEEEEEEeCCcccchHHHHHhhceeecCCcceeecCcCC-ccceEE--EEEeecCCceE-EEE
Confidence 99999999999999999999999999999999999999999999999999999996 455665 34456666654 555
No 10
>1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9
Probab=100.00 E-value=1.1e-39 Score=286.66 Aligned_cols=192 Identities=18% Similarity=0.281 Sum_probs=153.9
Q ss_pred CCccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcCCCCCCc------chhhHHHHHHHHHHHHHhcccCccccCcHH
Q 025024 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGD------AEENLLTCLADLFTQIRAQKKKTGVIAPKR 93 (259)
Q Consensus 20 ~~~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~~~~~~~------~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~ 93 (259)
..++||.|+||||||||+||+|+++|+|+++++........... ...+++++|++||..|+.+. ..+++|..
T Consensus 22 ~~~~GL~NlGNTCYmNSvLQ~L~~~p~fr~~ll~~~~~~~~~~~~~~~~~~~~~l~~~l~~lf~~l~~~~--~~~v~p~~ 99 (415)
T 1vjv_A 22 QLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKS--FKSVLPVV 99 (415)
T ss_dssp CCCCEECCCSSCHHHHHHHHHHHHSHHHHHHHHTCCGGGCCSCTTSTTHHHHHHHHHHHHHHHHHHHCC---CCEECCHH
T ss_pred CCCCCCEeCCcccHHHHHHHHHHcCHHHHHHHHhcccccccCCcccccccchhHHHHHHHHHHHHHhcCC--CCccCHHH
Confidence 55999999999999999999999999999999986433211111 25689999999999999864 34699999
Q ss_pred HHHHHHhhccccC-------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccCCCCCCCCCCCCCCCcccc
Q 025024 94 FVQRLKKQNELFR-------SYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVT 166 (259)
Q Consensus 94 l~~~~~~~~~~f~-------~~~Q~Da~Efl~~ll~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 166 (259)
|+.+++...+.|. ++.||||+|||.+||+.|++++.. +
T Consensus 100 ~~~~l~~~~~~f~~~~~~~~~~~QqDa~Efl~~lLd~L~~~~~~-----------------------------------~ 144 (415)
T 1vjv_A 100 LLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGD-----------------------------------K 144 (415)
T ss_dssp HHHHHHHHCGGGGCBC----CBCCCCHHHHHHHHHHHHHHHHTH-----------------------------------H
T ss_pred HHHHHHHhCchhhccccCCCCccccCHHHHHHHHHHHHHHHhcc-----------------------------------c
Confidence 9999999999998 899999999999999999998843 5
Q ss_pred ccccccceeeeeeeeeccCCCcc--ccccCceEeeeecCCC-CCHHHHHhhccccceeCCCCccccccCCCcceeeeeec
Q 025024 167 WVHKNFQGILTNETRCLRCETVT--ARDETFFDLSLDIEQN-SSITSCLKNFSSTETLNAEDKFFCDKCCRLVIYTYICK 243 (259)
Q Consensus 167 ~i~~lF~g~~~~~i~C~~C~~~s--~~~e~f~~L~L~i~~~-~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~~~~~ 243 (259)
+|.++|+ ++.++++|..|++++ .++|+|+.|+|+|+.. .+|+++|+.++. |.+. ++|++|++.+.+++ +
T Consensus 145 ~i~~~F~-~~~~~~~C~~C~~~s~s~~~e~f~~Lsl~i~~~~~~l~~~L~~~~~-e~i~----~~c~~c~~~~~a~k--~ 216 (415)
T 1vjv_A 145 FSEDFRI-QFKTTIKDTANDNDITVKENESDSKLQCHISGTTNFMRNGLLEGLN-EKIE----KRSDLTGANSIYSV--E 216 (415)
T ss_dssp HHTTTCE-EEEEEEEETTEEEEEEEECCCEESCEEECCCTTCCBHHHHHHHHHE-EC-------------CCCCEEE--E
T ss_pred hHHHHHH-hheEEEEECCCCCCccccccccceeeeeccccccchHHHHHHHHhh-hhhh----hcccccCCcccEEE--E
Confidence 6899999 999999999999987 5899999999999976 489999999997 4454 89999999988887 3
Q ss_pred cccccccchheecc
Q 025024 244 SSVTDISCIVVVLH 257 (259)
Q Consensus 244 ~~~~~~p~~l~i~h 257 (259)
..+..+|++| +||
T Consensus 217 ~~i~~lP~vL-~i~ 229 (415)
T 1vjv_A 217 KKISRLPKFL-TVQ 229 (415)
T ss_dssp EEEEECBSEE-EEE
T ss_pred EEcccCCCee-EEE
Confidence 4456666554 445
No 11
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens}
Probab=99.74 E-value=1.2e-18 Score=146.12 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=81.0
Q ss_pred ccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcCCCCCCcchhhHHHHH-HHHHHHHHhcccCccccCcHHHHHHHHh
Q 025024 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCL-ADLFTQIRAQKKKTGVIAPKRFVQRLKK 100 (259)
Q Consensus 22 ~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~l-~~l~~~l~~~~~~~~~~~p~~l~~~~~~ 100 (259)
++||.|+||||||||+||+|+++|.+...|..+...... ......++..| .++|..|.. ..+.|..++..+++
T Consensus 9 p~GLqNlgNTCYLNSTLq~Lfsipel~d~Ll~~~~~~~~-~~~~~~l~~~L~r~i~~~Lrk-----~~~~P~~~l~~LR~ 82 (374)
T 2vhf_A 9 KKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKND-VEYYSETQELLRTEIVNPLRI-----YGYVCATKIMKLRK 82 (374)
T ss_dssp SCEECCCSSCHHHHHHHHHHHSSBGGGHHHHHCCCCTTS-CTTHHHHHHHHHHTTHHHHHH-----TSEECHHHHHHHHH
T ss_pred CccccCCCcCcHHHHHHHHHHhchHHHHHHHhCCCCCCc-chhHHHHHHHHHHHHHHHHhh-----cCCCcHHHHHHHHH
Confidence 799999999999999999999999999999987433211 22334688899 899999996 25999999999999
Q ss_pred hccccC-----CCCCChHHHHHHHHHHHHH
Q 025024 101 QNELFR-----SYMHQDAHEFLNFLLNELV 125 (259)
Q Consensus 101 ~~~~f~-----~~~Q~Da~Efl~~ll~~L~ 125 (259)
..|+|+ ++.||||+||+..||+.|.
T Consensus 83 ~~pQfae~~G~~~~QQDaEE~~t~Ll~~L~ 112 (374)
T 2vhf_A 83 ILEKVEAASGFTSEEKDPEEFLNILFHHIL 112 (374)
T ss_dssp HHHHHC--------CCCHHHHHHHHHTTTT
T ss_pred HhHHHhcccCCCccccCHHHHHHHHHHHHh
Confidence 999886 4889999999999999875
No 12
>1qmy_A Protease, leader protease; hydrolase, sulfhydryl proteinase, picornaviral proteinase; 1.9A {Aphthovirus O} SCOP: d.3.1.2 PDB: 1qol_A 2jqf_R 2jqg_R
Probab=91.63 E-value=0.055 Score=38.68 Aligned_cols=23 Identities=17% Similarity=0.403 Sum_probs=20.2
Q ss_pred CCccccccccchhHHHHHHHHhh
Q 025024 20 ERYFGLENFGNTCYCNSVLQALY 42 (259)
Q Consensus 20 ~~~~GL~N~GntCy~Ns~LQ~L~ 42 (259)
..+.|+.|.-++||+|++||...
T Consensus 11 k~fys~pN~hdncWLNtilQLfr 33 (167)
T 1qmy_A 11 KTFYSRPNNHDNAWLNAILQLFR 33 (167)
T ss_dssp EECCCCCCSSSCHHHHHHHHHHH
T ss_pred cccccCCCCCcchHHHHHHHHHH
Confidence 34889999999999999999865
No 13
>3mp2_A Non-structural protein 3; papain-like protease, TGEV, hydrolase; 2.50A {Porcine transmissible gastroenteritiscoronavirus}
Probab=84.00 E-value=0.82 Score=35.32 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=43.1
Q ss_pred ccccccccchhHHHHHHHHhhCCHHHHHHHHHhhcCCCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHHHHHHhh
Q 025024 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQ 101 (259)
Q Consensus 22 ~~GL~N~GntCy~Ns~LQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~~~~~~~ 101 (259)
.+=|.-.-|+||+||++-.|-++... +.+++.++.. -+|..|+..+-..
T Consensus 13 ~~vLkq~dNNCwVNaa~l~LQ~~~~~------------------------~~~aw~~f~~-------Gd~~~fV~~~Ya~ 61 (211)
T 3mp2_A 13 KIILKQGDNNCWINACCYQLQAFDFF------------------------NNEAWEKFKK-------GDVMDFVNLCYAA 61 (211)
T ss_dssp EEEECCCTTCHHHHHHHHHHTTCTTC------------------------CCHHHHHHTT-------TCCHHHHHHHHHH
T ss_pred EEEEEccCCCcHHHHHHHHHHhcChh------------------------HHHHHHHHhC-------CChHHHHHHHHHH
Confidence 34445556999999998887766553 2223333332 2355555555433
Q ss_pred ccccCCCCCChHHHHHHHHH
Q 025024 102 NELFRSYMHQDAHEFLNFLL 121 (259)
Q Consensus 102 ~~~f~~~~Q~Da~Efl~~ll 121 (259)
. ....|+--||+++|..|+
T Consensus 62 ~-~~~~G~~gDa~~~L~~Ll 80 (211)
T 3mp2_A 62 T-TLARGHSGDAEYLLELML 80 (211)
T ss_dssp H-TCCTTSCCCHHHHHHHHH
T ss_pred c-CCCCCCCcCHHHHHHHHH
Confidence 2 355688899999999997
No 14
>2fe8_A PP1AB, ORF1AB, replicase polyprotein 1AB; protease, hydrolase; 1.85A {Sars coronavirus} PDB: 3e9s_A* 3mj5_A*
Probab=77.13 E-value=4.5 Score=33.28 Aligned_cols=73 Identities=23% Similarity=0.257 Sum_probs=45.3
Q ss_pred CccccccccchhHHHHHHHHhhCCHH-HHHHHHHhhcCCCCCCcchhhHHHHHHHHHHHHHhcccCccccCcHHHHHHHH
Q 025024 21 RYFGLENFGNTCYCNSVLQALYFCVP-FREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLK 99 (259)
Q Consensus 21 ~~~GL~N~GntCy~Ns~LQ~L~~~p~-f~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~p~~l~~~~~ 99 (259)
++.=|.-.-|+||+||++-.|-++.. |+. ..|++++..+..+ +|..|...+-
T Consensus 101 G~~vLkq~dNNCwVNaa~l~LQ~~~~~F~~--------------------~~l~~aw~~f~~G-------d~~~FVa~~Y 153 (315)
T 2fe8_A 101 GLTSIKWADNNCYLSSVLLALQQLEVKFNA--------------------PALQEAYYRARAG-------DAANFCALIL 153 (315)
T ss_dssp TEECCCCCTTTHHHHHHHHHHHTSCCCBSS--------------------HHHHHHHHHHHHT-------CCHHHHHHHH
T ss_pred CEEEEeecCCccHHHHHHHHHHhcCCccCC--------------------HHHHHHHHHHhCC-------ChHHHHHHHH
Confidence 34445555699999999877665433 221 2344444444443 3566666655
Q ss_pred hhccccCCCCCChHHHHHHHHH
Q 025024 100 KQNELFRSYMHQDAHEFLNFLL 121 (259)
Q Consensus 100 ~~~~~f~~~~Q~Da~Efl~~ll 121 (259)
.... ...|+--||+++|..|+
T Consensus 154 a~~~-~~~G~~gDa~~~L~~Ll 174 (315)
T 2fe8_A 154 AYSN-KTVGELGDVRETMTHLL 174 (315)
T ss_dssp HHTT-CCTTSCCCHHHHHHHHH
T ss_pred HhcC-CCCCCCccHHHHHHHHH
Confidence 4332 34678899999999984
No 15
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=58.84 E-value=7.8 Score=22.88 Aligned_cols=13 Identities=31% Similarity=0.669 Sum_probs=9.6
Q ss_pred eeeeeeccCCCcc
Q 025024 177 TNETRCLRCETVT 189 (259)
Q Consensus 177 ~~~i~C~~C~~~s 189 (259)
+..+.|.+|++..
T Consensus 13 ~~~~~Cp~Cg~~~ 25 (57)
T 1qyp_A 13 TTKITCPKCGNDT 25 (57)
T ss_dssp EEECCCTTTCCSE
T ss_pred ceEeECCCCCCCE
Confidence 3467899999843
No 16
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=54.92 E-value=4.1 Score=21.54 Aligned_cols=15 Identities=27% Similarity=0.532 Sum_probs=11.4
Q ss_pred eCCCCccccccCCCc
Q 025024 221 LNAEDKFFCDKCCRL 235 (259)
Q Consensus 221 l~~~~~~~C~~C~~~ 235 (259)
+.|+..|.|+.|++.
T Consensus 3 ~~gekp~~C~~CgK~ 17 (36)
T 1fv5_A 3 LLKPARFMCLPCGIA 17 (36)
T ss_dssp SSSCCCCEETTTTEE
T ss_pred CCCccCeECCCCCCc
Confidence 345677999999864
No 17
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.26 E-value=7.3 Score=19.84 Aligned_cols=14 Identities=14% Similarity=0.657 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 6 ~~k~~~C~~C~k~f 19 (37)
T 2elm_A 6 SGHLYYCSQCHYSS 19 (37)
T ss_dssp SSCEEECSSSSCEE
T ss_pred CCcCeECCCCCccc
Confidence 34569999998643
No 18
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=45.60 E-value=8.4 Score=19.37 Aligned_cols=14 Identities=29% Similarity=0.581 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 8 ~~k~~~C~~C~k~f 21 (37)
T 1p7a_A 8 GIKPFQCPDCDRSF 21 (37)
T ss_dssp CSSSBCCTTTCCCB
T ss_pred CCCCccCCCCCccc
Confidence 34569999998643
No 19
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=45.45 E-value=8.1 Score=21.03 Aligned_cols=15 Identities=47% Similarity=0.811 Sum_probs=10.7
Q ss_pred CCccccccCCCccee
Q 025024 224 EDKFFCDKCCRLVIY 238 (259)
Q Consensus 224 ~~~~~C~~C~~~~~~ 238 (259)
...+.|++||+....
T Consensus 7 ~~~~~C~~C~~~i~~ 21 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPV 21 (39)
T ss_dssp CCEEECTTTCCEEEG
T ss_pred CCCcccccccCcCCc
Confidence 345899999876543
No 20
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=44.83 E-value=14 Score=26.46 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=28.5
Q ss_pred eeeeeeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcce
Q 025024 175 ILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVI 237 (259)
Q Consensus 175 ~~~~~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~ 237 (259)
...-..+|.+||+.....+....|.-.... ...+-+|.+.. .+.|+.||....
T Consensus 66 ~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~--------~~h~~p~~~~~--~~~CP~Cgs~~~ 118 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKEVKDKFDERIKE--------DIHFIPEVVHA--FLACPKCGSHDF 118 (139)
T ss_dssp EECCEEEETTTCCEEEGGGCTTCCSCCCGG--------GCCCCGGGCGG--GCSCSSSSCCCE
T ss_pred ecCCcEECCCCCCEEecccccccccccccc--------ccccccccccc--CCcCccccCCcc
Confidence 666789999999876543322211111111 11222333321 278999998764
No 21
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.79 E-value=8.4 Score=17.62 Aligned_cols=10 Identities=30% Similarity=0.706 Sum_probs=8.2
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 3 ~~~C~~C~k~ 12 (27)
T 2kvh_A 3 PFSCSLCPQR 12 (27)
T ss_dssp CEECSSSSCE
T ss_pred CccCCCcChh
Confidence 4899999864
No 22
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=42.25 E-value=9.9 Score=18.66 Aligned_cols=13 Identities=15% Similarity=0.641 Sum_probs=9.7
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 4 ~~k~~~C~~C~k~ 16 (35)
T 2elx_A 4 GSSGYVCALCLKK 16 (35)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCCCeECCCCcch
Confidence 3456999999864
No 23
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=41.48 E-value=24 Score=24.08 Aligned_cols=57 Identities=14% Similarity=0.243 Sum_probs=26.7
Q ss_pred eeeeeccCCCccccccCceEeeeecCCC-CCHHHHHhhccccceeCCCCccccccCCCcc
Q 025024 178 NETRCLRCETVTARDETFFDLSLDIEQN-SSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236 (259)
Q Consensus 178 ~~i~C~~C~~~s~~~e~f~~L~L~i~~~-~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~ 236 (259)
.+..|..|+++....+... ..-.+..+ ....+.+..--+...+.- ....|++||...
T Consensus 25 ~~~~C~~C~y~~~~~~~~v-~~~~~~~~~~e~~~v~~~~~~~~tlp~-~~~~Cp~C~~~~ 82 (113)
T 3h0g_I 25 LRLACRNCDYSEIAATSKV-YRHELQSSNVENTTVSHDASTDPTLPR-SDKECPRCHQHE 82 (113)
T ss_dssp CCEECSSSCCEECCSCSEE-EECCCCSCSCTTCTTCTTSTTCSSSCB-CCSCCSSSCCSC
T ss_pred eEEECCCCCCeEEcCCCeE-EEEEEecccccccceeccccccccCCC-cccCCCCCCCce
Confidence 4689999998765433211 11111111 111222222222223322 238899998654
No 24
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=41.21 E-value=5.8 Score=29.56 Aligned_cols=49 Identities=18% Similarity=0.373 Sum_probs=33.4
Q ss_pred eeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcce
Q 025024 179 ETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVI 237 (259)
Q Consensus 179 ~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~ 237 (259)
+..|.+|+.. .+|..+.+. +|. +.|-..++.|++.|.. -.|.+||+...
T Consensus 124 ~wyc~~c~~~--~~e~~f~~~-dl~--~ql~~~~~~f~~~~e~-----rtc~~CG~~~~ 172 (176)
T 1zvf_A 124 RWYCSHCRQV--VHESELQML-DLG--TQVKEAILDFENDVEK-----RTCFHCKTLNY 172 (176)
T ss_dssp EEECTTTCCE--EEEEECCSS-STT--HHHHHHHHHHHTCHHH-----HBCTTTCCBCC
T ss_pred EEEcCCCCCE--EEEEEEEEe-chh--HhHHHHHHHHhcChhh-----ccCCCCCCcCC
Confidence 4678888862 222222221 333 4589999999999998 69999997654
No 25
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=41.01 E-value=10 Score=18.67 Aligned_cols=14 Identities=21% Similarity=0.612 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 4 ~~k~~~C~~C~k~f 17 (35)
T 1srk_A 4 GKRPFVCRICLSAF 17 (35)
T ss_dssp CCSCEECSSSCCEE
T ss_pred CCcCeeCCCCCccc
Confidence 34569999998643
No 26
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=40.94 E-value=10 Score=17.38 Aligned_cols=10 Identities=20% Similarity=0.733 Sum_probs=8.1
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 3 ~~~C~~C~k~ 12 (28)
T 2kvf_A 3 PYSCSVCGKR 12 (28)
T ss_dssp SEECSSSCCE
T ss_pred CccCCCCCcc
Confidence 4899999864
No 27
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=40.84 E-value=7.9 Score=17.85 Aligned_cols=10 Identities=20% Similarity=0.477 Sum_probs=8.1
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 3 ~~~C~~C~k~ 12 (27)
T 2kvg_A 3 PYRCPLCRAG 12 (27)
T ss_dssp TEEETTTTEE
T ss_pred CcCCCCCCcc
Confidence 5899999864
No 28
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=37.88 E-value=11 Score=16.95 Aligned_cols=10 Identities=30% Similarity=0.750 Sum_probs=7.8
Q ss_pred cccccCCCcc
Q 025024 227 FFCDKCCRLV 236 (259)
Q Consensus 227 ~~C~~C~~~~ 236 (259)
|.|+.|++.-
T Consensus 2 ~~C~~C~k~f 11 (27)
T 1znf_A 2 YKCGLCERSF 11 (27)
T ss_dssp CBCSSSCCBC
T ss_pred ccCCCCCCcC
Confidence 7899998643
No 29
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.24 E-value=13 Score=18.32 Aligned_cols=12 Identities=17% Similarity=0.606 Sum_probs=9.3
Q ss_pred CCccccccCCCc
Q 025024 224 EDKFFCDKCCRL 235 (259)
Q Consensus 224 ~~~~~C~~C~~~ 235 (259)
+..|.|+.|++.
T Consensus 7 ~k~~~C~~C~k~ 18 (36)
T 2elt_A 7 GKPYKCPQCSYA 18 (36)
T ss_dssp CCSEECSSSSCE
T ss_pred CCCCCCCCCCcc
Confidence 456999999864
No 30
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.73 E-value=15 Score=18.13 Aligned_cols=13 Identities=23% Similarity=0.685 Sum_probs=9.6
Q ss_pred CCccccccCCCcc
Q 025024 224 EDKFFCDKCCRLV 236 (259)
Q Consensus 224 ~~~~~C~~C~~~~ 236 (259)
+..|.|+.|++.-
T Consensus 7 ~~~~~C~~C~k~f 19 (36)
T 2elr_A 7 GKTHLCDMCGKKF 19 (36)
T ss_dssp CSSCBCTTTCCBC
T ss_pred CCCeecCcCCCCc
Confidence 4569999998643
No 31
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.72 E-value=12 Score=18.78 Aligned_cols=13 Identities=15% Similarity=0.529 Sum_probs=9.7
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (37)
T 2elo_A 6 SGRSYSCPVCEKS 18 (37)
T ss_dssp CCCCCEETTTTEE
T ss_pred CCCCcCCCCCCCc
Confidence 3456999999864
No 32
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.49 E-value=15 Score=18.24 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=9.2
Q ss_pred CCccccccCCCc
Q 025024 224 EDKFFCDKCCRL 235 (259)
Q Consensus 224 ~~~~~C~~C~~~ 235 (259)
+..|.|+.|++.
T Consensus 7 ~k~~~C~~C~k~ 18 (36)
T 2elv_A 7 GLLYDCHICERK 18 (36)
T ss_dssp CCCEECSSSCCE
T ss_pred CCCeECCCCCCc
Confidence 456999999864
No 33
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.46 E-value=15 Score=18.37 Aligned_cols=12 Identities=17% Similarity=0.296 Sum_probs=9.2
Q ss_pred CCccccccCCCc
Q 025024 224 EDKFFCDKCCRL 235 (259)
Q Consensus 224 ~~~~~C~~C~~~ 235 (259)
+..|.|+.|++.
T Consensus 7 ~k~~~C~~C~k~ 18 (37)
T 2elp_A 7 GRAMKCPYCDFY 18 (37)
T ss_dssp CCCEECSSSSCE
T ss_pred CCCeECCCCChh
Confidence 456999999864
No 34
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.24 E-value=14 Score=17.00 Aligned_cols=11 Identities=36% Similarity=0.854 Sum_probs=8.5
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 3 ~~~C~~C~~~f 13 (30)
T 2m0d_A 3 PYQCDYCGRSF 13 (30)
T ss_dssp CEECTTTCCEE
T ss_pred CccCCCCCccc
Confidence 48999998643
No 35
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.80 E-value=16 Score=18.03 Aligned_cols=14 Identities=21% Similarity=0.460 Sum_probs=10.0
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 6 ~~k~~~C~~C~k~f 19 (36)
T 2elq_A 6 SGKPFKCSLCEYAT 19 (36)
T ss_dssp CCCSEECSSSSCEE
T ss_pred CCCCccCCCCCchh
Confidence 34569999998643
No 36
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=33.69 E-value=15 Score=18.73 Aligned_cols=12 Identities=25% Similarity=0.598 Sum_probs=9.2
Q ss_pred CCccccccCCCc
Q 025024 224 EDKFFCDKCCRL 235 (259)
Q Consensus 224 ~~~~~C~~C~~~ 235 (259)
+..|.|+.|++.
T Consensus 4 ~k~~~C~~C~k~ 15 (39)
T 1njq_A 4 PRSYTCSFCKRE 15 (39)
T ss_dssp SSSEECTTTCCE
T ss_pred CCceECCCCCcc
Confidence 345999999864
No 37
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.63 E-value=16 Score=18.08 Aligned_cols=12 Identities=25% Similarity=0.797 Sum_probs=9.2
Q ss_pred CCccccccCCCc
Q 025024 224 EDKFFCDKCCRL 235 (259)
Q Consensus 224 ~~~~~C~~C~~~ 235 (259)
+..|.|+.|++.
T Consensus 7 ~k~~~C~~C~k~ 18 (36)
T 2els_A 7 GKIFTCEYCNKV 18 (36)
T ss_dssp CCCEECTTTCCE
T ss_pred CCCEECCCCCce
Confidence 345999999864
No 38
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.85 E-value=9.3 Score=17.23 Aligned_cols=11 Identities=18% Similarity=0.957 Sum_probs=8.4
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 2 p~~C~~C~k~f 12 (26)
T 2lvu_A 2 PYVCERCGKRF 12 (26)
Confidence 48899998644
No 39
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=32.46 E-value=54 Score=24.93 Aligned_cols=22 Identities=9% Similarity=-0.040 Sum_probs=13.9
Q ss_pred ccccceeeeeeeeeccCCCccc
Q 025024 169 HKNFQGILTNETRCLRCETVTA 190 (259)
Q Consensus 169 ~~lF~g~~~~~i~C~~C~~~s~ 190 (259)
..+-.|......+|..||++-.
T Consensus 161 ~~l~~~~~~~~~~C~~CG~i~~ 182 (202)
T 1yuz_A 161 NDIDAPDDDKFHLCPICGYIHK 182 (202)
T ss_dssp HTTTCCCSCCEEECSSSCCEEE
T ss_pred HHHhcCCCCcEEEECCCCCEEc
Confidence 3333444445789999998743
No 40
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.69 E-value=20 Score=18.45 Aligned_cols=14 Identities=29% Similarity=0.826 Sum_probs=10.4
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 8 ~~k~~~C~~C~k~f 21 (42)
T 2ytb_A 8 GEKPYRCDQCGKAF 21 (42)
T ss_dssp SCCSBCCTTTTCCB
T ss_pred CCCCeeCCCccchh
Confidence 44569999998643
No 41
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.42 E-value=21 Score=18.38 Aligned_cols=13 Identities=23% Similarity=0.680 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 7 ~~k~~~C~~C~k~ 19 (42)
T 2yte_A 7 GEKPYSCAECKET 19 (42)
T ss_dssp SCCSCBCTTTCCB
T ss_pred CCCCeECCCCCCc
Confidence 3456999999864
No 42
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=31.23 E-value=16 Score=16.76 Aligned_cols=11 Identities=36% Similarity=0.875 Sum_probs=8.3
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 2 ~~~C~~C~k~f 12 (29)
T 1rik_A 2 KFACPECPKRF 12 (29)
T ss_dssp CEECSSSSCEE
T ss_pred CccCCCCCchh
Confidence 38899998643
No 43
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=30.96 E-value=18 Score=16.50 Aligned_cols=10 Identities=40% Similarity=1.139 Sum_probs=7.9
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 2 ~~~C~~C~~~ 11 (29)
T 1ard_A 2 SFVCEVCTRA 11 (29)
T ss_dssp CCBCTTTCCB
T ss_pred CeECCCCCcc
Confidence 3899999864
No 44
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=30.60 E-value=14 Score=27.52 Aligned_cols=13 Identities=23% Similarity=0.723 Sum_probs=10.8
Q ss_pred cccccCCCcceee
Q 025024 227 FFCDKCCRLVIYT 239 (259)
Q Consensus 227 ~~C~~C~~~~~~~ 239 (259)
|+|+.|+|.....
T Consensus 155 YKCe~CgKYvDId 167 (226)
T 2czr_A 155 YKCEECGKYVDIE 167 (226)
T ss_dssp EECTTTCCEEEGG
T ss_pred EehhhcCceecHH
Confidence 7999999987654
No 45
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.43 E-value=19 Score=18.95 Aligned_cols=13 Identities=23% Similarity=0.797 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (44)
T 2epv_A 9 GEKPYECNECGKA 21 (44)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCcCeECCCCCcc
Confidence 3456999999864
No 46
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=30.15 E-value=17 Score=17.51 Aligned_cols=11 Identities=27% Similarity=0.718 Sum_probs=8.5
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 2 p~~C~~C~k~f 12 (32)
T 2kfq_A 2 AFACPACPKRF 12 (32)
T ss_dssp CSSSSSSCTTH
T ss_pred CCCCCCCCccc
Confidence 48999998743
No 47
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.01 E-value=22 Score=18.35 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 8 ~~k~~~C~~C~k~f 21 (42)
T 2eos_A 8 GEKPYPCEICGTRF 21 (42)
T ss_dssp SSCCBCCSSSCCCB
T ss_pred CCCCEECCCCCCcc
Confidence 34569999998643
No 48
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=29.42 E-value=19 Score=16.57 Aligned_cols=11 Identities=27% Similarity=0.763 Sum_probs=8.3
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 2 ~~~C~~C~k~f 12 (30)
T 1paa_A 2 AYACGLCNRAF 12 (30)
T ss_dssp CSBCTTTCCBC
T ss_pred CcCCcccCccc
Confidence 38899998643
No 49
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.39 E-value=23 Score=18.73 Aligned_cols=14 Identities=29% Similarity=0.975 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2emg_A 9 GENPFICSECGKVF 22 (46)
T ss_dssp SCCSCBCTTTCCBC
T ss_pred CCCCEECCccCccc
Confidence 34569999998643
No 50
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=29.33 E-value=21 Score=18.38 Aligned_cols=13 Identities=23% Similarity=0.797 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
|+..|.|+.|++.
T Consensus 7 ~~k~~~C~~C~k~ 19 (42)
T 2el5_A 7 GENPYECSECGKA 19 (42)
T ss_dssp SCCSEECSSSCCE
T ss_pred CCCCccCCCcChh
Confidence 4456999999864
No 51
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.17 E-value=20 Score=18.46 Aligned_cols=14 Identities=21% Similarity=0.641 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 8 ~~k~~~C~~C~k~f 21 (42)
T 2en2_A 8 GEKPYKCETCGARF 21 (42)
T ss_dssp SSCSEECTTTCCEE
T ss_pred CCCCEeCCCcChhh
Confidence 44569999998643
No 52
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=28.55 E-value=22 Score=18.30 Aligned_cols=14 Identities=21% Similarity=0.807 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 8 ~~~~~~C~~C~k~f 21 (42)
T 2epc_A 8 GETPYLCGQCGKSF 21 (42)
T ss_dssp SSCCEECSSSCCEE
T ss_pred CCCCeECCCCCccc
Confidence 34569999998643
No 53
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.25 E-value=25 Score=18.57 Aligned_cols=13 Identities=23% Similarity=0.889 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2enf_A 9 GEKPYKCNECGKV 21 (46)
T ss_dssp CCCSCBCSSSCCB
T ss_pred CCcCeECCCCCcc
Confidence 3456999999864
No 54
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.84 E-value=26 Score=18.58 Aligned_cols=14 Identities=21% Similarity=0.657 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eon_A 9 GEKPYKCQVCGKAF 22 (46)
T ss_dssp SCCSCBCSSSCCBC
T ss_pred CCcccCCCCCCccc
Confidence 34569999998653
No 55
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.73 E-value=23 Score=18.12 Aligned_cols=14 Identities=14% Similarity=0.601 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 7 ~~k~~~C~~C~k~f 20 (41)
T 2ept_A 7 GQRVYECQECGKSF 20 (41)
T ss_dssp CCCCEECSSSCCEE
T ss_pred CCCCeECCCCCCCc
Confidence 34569999998643
No 56
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=27.66 E-value=19 Score=16.31 Aligned_cols=10 Identities=20% Similarity=0.703 Sum_probs=7.8
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 2 ~~~C~~C~k~ 11 (29)
T 2m0f_A 2 PLKCRECGKQ 11 (29)
T ss_dssp CEECTTTSCE
T ss_pred CccCCCCCCc
Confidence 3889999864
No 57
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=27.17 E-value=21 Score=16.07 Aligned_cols=10 Identities=20% Similarity=0.604 Sum_probs=7.8
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 2 ~~~C~~C~~~ 11 (29)
T 2m0e_A 2 EHKCPHCDKK 11 (29)
T ss_dssp CCCCSSCCCC
T ss_pred CCcCCCCCcc
Confidence 4889999864
No 58
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=27.03 E-value=24 Score=19.20 Aligned_cols=13 Identities=23% Similarity=0.741 Sum_probs=9.6
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
|+..|.|+.|++.
T Consensus 4 ~~kp~~C~~C~k~ 16 (48)
T 3iuf_A 4 RDKPYACDICGKR 16 (48)
T ss_dssp TTSCEECTTTCCE
T ss_pred CCcCEECCCcCcc
Confidence 3445999999864
No 59
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.97 E-value=24 Score=18.31 Aligned_cols=13 Identities=15% Similarity=0.756 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (44)
T 2en7_A 9 GMKPYVCNECGKA 21 (44)
T ss_dssp SSSSSCCTTTCCC
T ss_pred CCcCeECCCCCCc
Confidence 3456999999864
No 60
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=26.97 E-value=24 Score=16.03 Aligned_cols=11 Identities=18% Similarity=0.455 Sum_probs=8.3
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 2 ~~~C~~C~k~f 12 (30)
T 1klr_A 2 TYQCQYCEFRS 12 (30)
T ss_dssp CCCCSSSSCCC
T ss_pred CccCCCCCCcc
Confidence 38899998643
No 61
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.95 E-value=25 Score=18.38 Aligned_cols=14 Identities=21% Similarity=0.612 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (44)
T 2eou_A 9 AKTTSECQECGKIF 22 (44)
T ss_dssp SSCCCCCTTTCCCC
T ss_pred CCcCeECCCCCccc
Confidence 34569999998643
No 62
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.94 E-value=28 Score=18.44 Aligned_cols=14 Identities=29% Similarity=0.657 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2em6_A 9 GEKCYKCDVCGKEF 22 (46)
T ss_dssp CCCCCBCSSSCCBC
T ss_pred CCCCeECCCCCccc
Confidence 34569999998653
No 63
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.86 E-value=25 Score=18.38 Aligned_cols=13 Identities=46% Similarity=1.009 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (44)
T 2yu5_A 9 GENPFKCSKCDRV 21 (44)
T ss_dssp CCCSEECSSSSCE
T ss_pred CCCCeECCCCCch
Confidence 4456999999864
No 64
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.84 E-value=26 Score=18.44 Aligned_cols=13 Identities=23% Similarity=0.713 Sum_probs=10.0
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2ep1_A 9 GEKPYECSDCGKS 21 (46)
T ss_dssp SCCSSCCSSSCCC
T ss_pred CCCCcCCCCCCch
Confidence 4456999999865
No 65
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=32.83 E-value=13 Score=17.15 Aligned_cols=11 Identities=27% Similarity=0.764 Sum_probs=8.4
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 3 ~~~C~~C~k~f 13 (30)
T 2lvr_A 3 PYVCIHCQRQF 13 (30)
Confidence 48999998643
No 66
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.55 E-value=25 Score=18.55 Aligned_cols=14 Identities=21% Similarity=0.757 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eq1_A 9 GEKPYKCNECGKAF 22 (46)
T ss_dssp CSCCCCCTTTTCCC
T ss_pred CCCCeECCcCChhh
Confidence 44569999998643
No 67
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.45 E-value=26 Score=18.53 Aligned_cols=14 Identities=29% Similarity=0.807 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2yth_A 9 GEKPFQCEECGKRF 22 (46)
T ss_dssp CSSSBCCSSSCCCB
T ss_pred CCcCCCCCCCCccc
Confidence 34569999998653
No 68
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.15 E-value=26 Score=18.53 Aligned_cols=13 Identities=23% Similarity=0.764 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~~~~~C~~C~k~ 21 (46)
T 2emi_A 9 GERHYECSECGKA 21 (46)
T ss_dssp SCCCEECSSSCCE
T ss_pred CCCCCCCCCCCcc
Confidence 3456999999864
No 69
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.12 E-value=27 Score=18.48 Aligned_cols=14 Identities=29% Similarity=0.729 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2enh_A 9 GEKPYECDVCRKAF 22 (46)
T ss_dssp CSSSCBCTTTCCBC
T ss_pred CCCCcCCCCcCchh
Confidence 34569999998643
No 70
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.06 E-value=25 Score=18.25 Aligned_cols=13 Identities=23% Similarity=0.787 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (44)
T 2eof_A 9 GEKPYECNECQKA 21 (44)
T ss_dssp CCCSEECTTTCCE
T ss_pred CCCCeECCCCCcc
Confidence 4456999999864
No 71
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.99 E-value=28 Score=18.40 Aligned_cols=14 Identities=21% Similarity=0.828 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2yti_A 9 GEKPYKCNECGKVF 22 (46)
T ss_dssp CCCTTCCSSSCCCC
T ss_pred CCcCeECCCCCccc
Confidence 34569999998643
No 72
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.97 E-value=28 Score=18.38 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2en9_A 9 GKKLFKCNECKKTF 22 (46)
T ss_dssp SSCCCBCTTTCCBC
T ss_pred CCCCEECCccCccc
Confidence 34569999998643
No 73
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.95 E-value=27 Score=18.42 Aligned_cols=14 Identities=14% Similarity=0.669 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eq2_A 9 GGKPYQCNECGKAF 22 (46)
T ss_dssp SSCSSSCCSSCCCC
T ss_pred CCCCeECCCCCccc
Confidence 34569999998643
No 74
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=25.92 E-value=26 Score=18.54 Aligned_cols=14 Identities=29% Similarity=0.707 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2emj_A 9 GEKPFECAECGKSF 22 (46)
T ss_dssp CCCSEECSSSSCEE
T ss_pred CCCCEECCCCCccc
Confidence 34569999998643
No 75
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.88 E-value=29 Score=18.09 Aligned_cols=14 Identities=29% Similarity=0.809 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 7 ~~k~~~C~~C~k~f 20 (43)
T 2yrm_A 7 GNGAFFCNECDCRF 20 (43)
T ss_dssp SSCCBCCSSSCCCB
T ss_pred CCCCEECCCCCCee
Confidence 34569999998653
No 76
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.82 E-value=27 Score=18.46 Aligned_cols=14 Identities=14% Similarity=0.638 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eoh_A 9 GKKPYECKECRKTF 22 (46)
T ss_dssp CSCSCCCSSSCCCC
T ss_pred CCCCcCCCCcCchh
Confidence 34569999998643
No 77
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.70 E-value=25 Score=18.64 Aligned_cols=14 Identities=14% Similarity=0.536 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2em4_A 9 GQRPYECIECGKAF 22 (46)
T ss_dssp CSSSEECSSSCCEE
T ss_pred CCcCcCCCCCCCcc
Confidence 34569999998643
No 78
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=25.56 E-value=8.7 Score=28.60 Aligned_cols=51 Identities=18% Similarity=0.284 Sum_probs=33.2
Q ss_pred eeeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCccee
Q 025024 178 NETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLVIY 238 (259)
Q Consensus 178 ~~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~ 238 (259)
-+..|.+|+.. .+|..+.+. +|. +.|-..++.|++.|.. -.|.+||+...+
T Consensus 121 ~~wyc~~c~~~--~~e~~f~~~-dl~--~~l~~~~~~f~~~~~~-----rtc~~Cg~~~~~ 171 (174)
T 1yfu_A 121 FEWYCDACGHL--VHRVEVQLK-SIV--TDLPPLFESFYASEDK-----RRCPHCGQVHPG 171 (174)
T ss_dssp EEEECTTTCCE--EEEEEECCS-CHH--HHSHHHHHHHHTCHHH-----HBCTTTCCBCCC
T ss_pred eEEEcCCCCCE--EEEEEEEEe-chh--HhHHHHHHHHhcCHhh-----ccCCCCCCcCCC
Confidence 34678888862 222222221 222 3477889999999988 699999976543
No 79
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.37 E-value=29 Score=18.35 Aligned_cols=13 Identities=31% Similarity=0.759 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2emz_A 9 GERPFKCNECGKG 21 (46)
T ss_dssp CCCSCCCSSSCCC
T ss_pred CCCCeECCCCCcc
Confidence 3456999999864
No 80
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=25.23 E-value=24 Score=17.11 Aligned_cols=10 Identities=40% Similarity=0.959 Sum_probs=7.9
Q ss_pred ccccccCCCc
Q 025024 226 KFFCDKCCRL 235 (259)
Q Consensus 226 ~~~C~~C~~~ 235 (259)
.|.|+.|++.
T Consensus 2 p~~C~~C~k~ 11 (33)
T 1rim_A 2 KFACPECPKR 11 (33)
T ss_dssp CCCCSSSCCC
T ss_pred cccCCCCCch
Confidence 3889999864
No 81
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.18 E-value=27 Score=18.43 Aligned_cols=14 Identities=21% Similarity=0.774 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2eor_A 9 GEKPYNCEECGKAF 22 (46)
T ss_dssp CCCSEECTTTCCEE
T ss_pred CCcCccCCCCCCCc
Confidence 34569999998643
No 82
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.17 E-value=29 Score=18.41 Aligned_cols=13 Identities=23% Similarity=0.669 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eom_A 9 GERGHRCSDCGKF 21 (46)
T ss_dssp CCSSCCCSSSCCC
T ss_pred CCCCcCCCCCCCe
Confidence 3456999999864
No 83
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.03 E-value=28 Score=18.34 Aligned_cols=13 Identities=23% Similarity=0.899 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2yts_A 9 GEKPYICNECGKS 21 (46)
T ss_dssp SCCSEECSSSCCE
T ss_pred CCcCEECCCCChh
Confidence 3456999999864
No 84
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=30.88 E-value=15 Score=16.89 Aligned_cols=11 Identities=18% Similarity=0.434 Sum_probs=8.3
Q ss_pred ccccccCCCcc
Q 025024 226 KFFCDKCCRLV 236 (259)
Q Consensus 226 ~~~C~~C~~~~ 236 (259)
.|.|+.|++.-
T Consensus 2 ~~~C~~C~k~f 12 (29)
T 2lvt_A 2 PCQCVMCGKAF 12 (29)
Confidence 38899998643
No 85
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.88 E-value=27 Score=18.24 Aligned_cols=14 Identities=21% Similarity=0.664 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (44)
T 2emb_A 9 TRKRYECSKCQATF 22 (44)
T ss_dssp CCSSEECTTTCCEE
T ss_pred CCCCeECCCCCCcc
Confidence 34569999998643
No 86
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.79 E-value=28 Score=18.44 Aligned_cols=14 Identities=21% Similarity=0.712 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2ytp_A 9 GERHYECSECGKAF 22 (46)
T ss_dssp CCCCEECSSSCCEE
T ss_pred CCCCeECCcCCccc
Confidence 34569999998643
No 87
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.78 E-value=28 Score=18.33 Aligned_cols=14 Identities=21% Similarity=0.710 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2yrj_A 9 GEKPYRCGECGKAF 22 (46)
T ss_dssp CCCCEECSSSCCEE
T ss_pred CCCCeECCCCCCcc
Confidence 34569999998653
No 88
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=24.72 E-value=27 Score=19.46 Aligned_cols=13 Identities=23% Similarity=0.549 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
|+..|.|+.|++.
T Consensus 21 ~~k~~~C~~C~k~ 33 (54)
T 1yui_A 21 SEQPATCPICYAV 33 (54)
T ss_dssp SSCCEECTTTCCE
T ss_pred CCCCccCCCCCcc
Confidence 3456999999864
No 89
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.71 E-value=28 Score=18.34 Aligned_cols=13 Identities=23% Similarity=0.813 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eow_A 9 GEKPYKCNECGKA 21 (46)
T ss_dssp CCCCEECTTSCCE
T ss_pred CCCCeeccccCCh
Confidence 4456999999864
No 90
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.63 E-value=23 Score=18.45 Aligned_cols=13 Identities=23% Similarity=0.779 Sum_probs=9.7
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (44)
T 2eoj_A 9 GENPYECCECGKV 21 (44)
T ss_dssp SCCSCEETTTTEE
T ss_pred CCcCeeCCCCCCc
Confidence 3456999999864
No 91
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.59 E-value=29 Score=18.05 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 7 ~~k~~~C~~C~k~f 20 (44)
T 2emx_A 7 GEKPFGCSCCEKAF 20 (44)
T ss_dssp SCCCEECSSSSCEE
T ss_pred CCcCccCCCCCccc
Confidence 34569999998643
No 92
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=24.56 E-value=27 Score=21.90 Aligned_cols=45 Identities=11% Similarity=0.340 Sum_probs=24.5
Q ss_pred eeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcc
Q 025024 179 ETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236 (259)
Q Consensus 179 ~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~ 236 (259)
..+|..|+... .........+.+.+. .+.-+.+.+ ++|+.||...
T Consensus 2 ~m~Cp~Cg~~~-l~~~~~~~~~~~~G~---------~~~I~~Vp~---~~C~~CGE~~ 46 (78)
T 3ga8_A 2 HMKCPVCHQGE-MVSGIKDIPYTFRGR---------KTVLKGIHG---LYCVHCEESI 46 (78)
T ss_dssp -CBCTTTSSSB-EEEEEEEEEEEETTE---------EEEEEEEEE---EEETTTCCEE
T ss_pred ceECCCCCCCe-eEeEEEEEEEEECCE---------EEEEcCcee---EECCCCCCEE
Confidence 35799998643 223334444555441 122234444 9999998654
No 93
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.45 E-value=29 Score=18.33 Aligned_cols=14 Identities=21% Similarity=0.700 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ep3_A 9 GEKPYRCAECGKAF 22 (46)
T ss_dssp CCCSEECSSSCCEE
T ss_pred CCCCeECCCCCchh
Confidence 34569999998643
No 94
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.39 E-value=33 Score=18.00 Aligned_cols=14 Identities=21% Similarity=0.679 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2eov_A 9 GEKPYKCSDCGKSF 22 (46)
T ss_dssp SCCSCBCSSSCCBC
T ss_pred CCCCccCCccChhh
Confidence 34569999998643
No 95
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.37 E-value=32 Score=18.06 Aligned_cols=14 Identities=21% Similarity=0.539 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2eop_A 9 GEKPHECRECGKSF 22 (46)
T ss_dssp CCCSCBCTTTCCBC
T ss_pred CCCCeeCCCCCchh
Confidence 44569999998653
No 96
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=24.37 E-value=31 Score=18.17 Aligned_cols=14 Identities=21% Similarity=0.539 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2em0_A 9 GEKTWKCRECDMCF 22 (46)
T ss_dssp CCCCCCCSSSCCCC
T ss_pred CCcCeECCCCCccc
Confidence 44569999998643
No 97
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.31 E-value=29 Score=18.28 Aligned_cols=13 Identities=23% Similarity=0.733 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~~~~~C~~C~k~ 21 (46)
T 2em3_A 9 GEKPYECKVCSKA 21 (46)
T ss_dssp SCCSEECSSSCCE
T ss_pred CCcCeECCCCCcc
Confidence 3456999999864
No 98
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.23 E-value=28 Score=18.36 Aligned_cols=14 Identities=21% Similarity=0.622 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2yso_A 9 REKSHQCRECGEIF 22 (46)
T ss_dssp CCCCEECTTTCCEE
T ss_pred CCCCEEccccChhh
Confidence 34569999998643
No 99
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.21 E-value=29 Score=18.27 Aligned_cols=14 Identities=21% Similarity=0.634 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eml_A 9 GEKPYECSVCGKAF 22 (46)
T ss_dssp SCCSEECSSSCCEE
T ss_pred CCCCeeCCCcCCcc
Confidence 45569999998643
No 100
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.21 E-value=29 Score=18.33 Aligned_cols=13 Identities=23% Similarity=0.698 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
|+..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eoo_A 9 GERPYGCNECGKN 21 (46)
T ss_dssp CCCCEECSSSCCE
T ss_pred CCCCEEccccCcc
Confidence 4456999999864
No 101
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.17 E-value=30 Score=18.57 Aligned_cols=12 Identities=8% Similarity=0.144 Sum_probs=8.9
Q ss_pred CCCccccccCCC
Q 025024 223 AEDKFFCDKCCR 234 (259)
Q Consensus 223 ~~~~~~C~~C~~ 234 (259)
++..|.|+.|+|
T Consensus 37 ~~k~~~C~~C~k 48 (48)
T 2epr_A 37 GEKPYSSGPSSG 48 (48)
T ss_dssp SCCCCCSCCCCC
T ss_pred CCCCccCCCCCC
Confidence 344599999975
No 102
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.13 E-value=32 Score=18.12 Aligned_cols=14 Identities=21% Similarity=0.638 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2elz_A 9 VEKPYKCEDCGKGY 22 (46)
T ss_dssp CCSSCBCSSSCCBC
T ss_pred CCCCeeCcccCchh
Confidence 44569999998653
No 103
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.77 E-value=30 Score=18.23 Aligned_cols=13 Identities=31% Similarity=0.677 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2en3_A 9 GEKPFQCKECGMN 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCCCeeCcccChh
Confidence 3456999999864
No 104
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=23.75 E-value=34 Score=18.05 Aligned_cols=14 Identities=21% Similarity=0.703 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2emk_A 9 GEKPYECKECGKAF 22 (46)
T ss_dssp SSCSCBCSSSCCBC
T ss_pred CCCceECCCCCchh
Confidence 44569999998653
No 105
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.69 E-value=34 Score=18.01 Aligned_cols=14 Identities=21% Similarity=0.672 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ytq_A 9 GEKPYGCSECGKAF 22 (46)
T ss_dssp CCCSCBCSSSCCBC
T ss_pred CCCCcCCCccChhh
Confidence 34569999998643
No 106
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.64 E-value=29 Score=18.29 Aligned_cols=13 Identities=23% Similarity=0.772 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2emh_A 9 GERPYICTVCGKA 21 (46)
T ss_dssp CCCSEECTTTCCE
T ss_pred CCCCcCCCCCCch
Confidence 4456999999864
No 107
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.58 E-value=24 Score=18.71 Aligned_cols=13 Identities=23% Similarity=0.751 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eoz_A 9 GEKPYSCNVCGKA 21 (46)
T ss_dssp SCCSEEETTTTEE
T ss_pred CCCCeECcccChh
Confidence 3456999999864
No 108
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.56 E-value=31 Score=18.22 Aligned_cols=13 Identities=23% Similarity=0.751 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2yto_A 9 GEKPYKCSDCGKA 21 (46)
T ss_dssp SCCCEECSSSCCE
T ss_pred CCCCEECcccCCc
Confidence 3456999999864
No 109
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=23.53 E-value=30 Score=18.25 Aligned_cols=14 Identities=14% Similarity=0.588 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2el6_A 9 GVNPYKCSQCEKSF 22 (46)
T ss_dssp CCCSEECSSSSCEE
T ss_pred CCCCeECCCCCccc
Confidence 44569999998643
No 110
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.48 E-value=33 Score=18.03 Aligned_cols=14 Identities=29% Similarity=0.615 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2epz_A 9 GEKPFDCIDCGKAF 22 (46)
T ss_dssp CCCSBCCTTTCCCB
T ss_pred CCCCeECCCCCcee
Confidence 34569999998653
No 111
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=23.46 E-value=34 Score=18.03 Aligned_cols=14 Identities=29% Similarity=0.605 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ely_A 9 GEKPFKCVECGKGF 22 (46)
T ss_dssp CCCSBCCSSSCCCB
T ss_pred CCCCcccCccCccc
Confidence 34569999998643
No 112
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=23.35 E-value=34 Score=23.64 Aligned_cols=45 Identities=11% Similarity=0.378 Sum_probs=24.9
Q ss_pred eeeeccCCCccccccCceEeeeecCCCCCHHHHHhhccccceeCCCCccccccCCCcc
Q 025024 179 ETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRLV 236 (259)
Q Consensus 179 ~i~C~~C~~~s~~~e~f~~L~L~i~~~~sL~~~L~~~~~~e~l~~~~~~~C~~C~~~~ 236 (259)
+.+|..|+.... .......++.+.+. . +.-+.+.+ ++|+.||...
T Consensus 2 ~M~Cp~Cg~~~~-~~~~~~~~~~~kg~--------~-~~v~~v~~---~~C~~CGE~~ 46 (133)
T 3o9x_A 2 HMKCPVCHQGEM-VSGIKDIPYTFRGR--------K-TVLKGIHG---LYCVHCEESI 46 (133)
T ss_dssp CCBCTTTSSSBE-EEEEEEEEEEETTE--------E-EEEEEEEE---EEESSSSCEE
T ss_pred CcCCCcCCCCce-eeceEEEEEEECCE--------E-EEECCCce---eECCCCCCEe
Confidence 358999987543 22334455566541 1 11122233 8999998654
No 113
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.34 E-value=25 Score=18.54 Aligned_cols=13 Identities=23% Similarity=0.805 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eq3_A 9 GEKPYECNQCGKA 21 (46)
T ss_dssp CCCSSEETTTTEE
T ss_pred CCCCeECCCCChh
Confidence 3456999999864
No 114
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.30 E-value=31 Score=18.13 Aligned_cols=13 Identities=23% Similarity=0.606 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
|+..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2epw_A 9 GEKPCKCTECGKA 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCCCeeCCCCCCc
Confidence 3456999999864
No 115
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.28 E-value=34 Score=17.99 Aligned_cols=14 Identities=14% Similarity=0.544 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (47)
T 2epx_A 9 GKKPYECIECGKAF 22 (47)
T ss_dssp CCCSBCCSSSCCCB
T ss_pred CCCCEECCccCchh
Confidence 34569999998654
No 116
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.22 E-value=31 Score=18.22 Aligned_cols=14 Identities=21% Similarity=0.660 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2emf_A 9 GGKHFECTECGKAF 22 (46)
T ss_dssp SSCCEECSSSCCEE
T ss_pred CCCCeECCCCCchh
Confidence 34569999998653
No 117
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.20 E-value=31 Score=18.11 Aligned_cols=13 Identities=31% Similarity=0.792 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2ytf_A 9 GEKPFECSECQKA 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCCCcCCCCCCcc
Confidence 3456999999864
No 118
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.07 E-value=32 Score=18.18 Aligned_cols=14 Identities=29% Similarity=0.762 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2em2_A 9 GEKPFKCKECGKAF 22 (46)
T ss_dssp CCCSEECSSSCCEE
T ss_pred CCCCEECCcCCchh
Confidence 34569999998643
No 119
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.06 E-value=25 Score=18.35 Aligned_cols=13 Identities=15% Similarity=0.728 Sum_probs=9.7
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~~~~~C~~C~k~ 21 (44)
T 2eox_A 9 DSKSYNCNECGKA 21 (44)
T ss_dssp CCCCEEETTTTEE
T ss_pred CCCCeECcccCcc
Confidence 3456999999864
No 120
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.05 E-value=34 Score=17.97 Aligned_cols=14 Identities=14% Similarity=0.771 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2ytn_A 9 GKKPYKCNECGKVF 22 (46)
T ss_dssp CCSSCBCTTTCCBC
T ss_pred CCcCeECCCCCCee
Confidence 34569999998643
No 121
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=23.02 E-value=16 Score=17.06 Aligned_cols=9 Identities=44% Similarity=1.490 Sum_probs=7.2
Q ss_pred cccccCCCc
Q 025024 227 FFCDKCCRL 235 (259)
Q Consensus 227 ~~C~~C~~~ 235 (259)
+.|+.|.+.
T Consensus 6 ffcetcskp 14 (26)
T 1loi_A 6 FFCETCSKP 14 (26)
T ss_dssp HHHHTSSCT
T ss_pred HHHHhcCCc
Confidence 889999654
No 122
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=23.01 E-value=31 Score=18.18 Aligned_cols=13 Identities=23% Similarity=0.974 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2ema_A 9 GEKRYKCNECGKV 21 (46)
T ss_dssp TSCCEECSSSCCE
T ss_pred CCcCcCCCCCcch
Confidence 4456999999864
No 123
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.90 E-value=31 Score=18.20 Aligned_cols=13 Identities=38% Similarity=0.805 Sum_probs=9.7
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eoy_A 9 KEKCFKCNKCEKT 21 (46)
T ss_dssp CSCCEECSSSCCE
T ss_pred CCCCEECcCCCCc
Confidence 3456999999864
No 124
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.88 E-value=32 Score=18.09 Aligned_cols=14 Identities=21% Similarity=0.800 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ytj_A 9 GEKPYICAECGKAF 22 (46)
T ss_dssp SCCSEECSSSCCEE
T ss_pred CCcCeECCCCChhh
Confidence 34569999998643
No 125
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.85 E-value=32 Score=18.13 Aligned_cols=14 Identities=21% Similarity=0.740 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~F 22 (46)
T 2emy_A 9 GENPYECHECGKAF 22 (46)
T ss_dssp SSCCEECSSSCCEE
T ss_pred CCcCcCCCCCCccc
Confidence 34569999998643
No 126
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.72 E-value=34 Score=17.93 Aligned_cols=14 Identities=21% Similarity=0.757 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ytr_A 9 GEKPYKCNECGKAF 22 (46)
T ss_dssp SCCTTCCTTTCCCC
T ss_pred CCcCcCCCCCCCcc
Confidence 44569999998643
No 127
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.45 E-value=33 Score=18.05 Aligned_cols=13 Identities=23% Similarity=0.744 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2em7_A 9 GEKPYKCEECGKG 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCcCccCCCccch
Confidence 3456999999864
No 128
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=22.40 E-value=34 Score=17.98 Aligned_cols=14 Identities=14% Similarity=0.605 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
|+..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2el4_A 9 GVKPYGCSQCAKTF 22 (46)
T ss_dssp CCCSEECSSSSCEE
T ss_pred CCCceECCCCCchh
Confidence 44569999998643
No 129
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.35 E-value=35 Score=17.92 Aligned_cols=14 Identities=36% Similarity=0.762 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2eoq_A 9 GEKPFKCDICGKSF 22 (46)
T ss_dssp SSCSCCCSSSCCCC
T ss_pred CCCCcCCCcCCchh
Confidence 44569999998643
No 130
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.16 E-value=35 Score=17.88 Aligned_cols=14 Identities=21% Similarity=0.665 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eq4_A 9 GEKLYNCKECGKSF 22 (46)
T ss_dssp CCCCCCBTTTTBCC
T ss_pred CCCCeECCCCCCcc
Confidence 34569999998643
No 131
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.10 E-value=27 Score=18.36 Aligned_cols=13 Identities=23% Similarity=0.703 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (45)
T 2epu_A 9 GQKPFECTHCGKS 21 (45)
T ss_dssp SCCSEEETTTTEE
T ss_pred CCcCccCCCCCCc
Confidence 3456999999864
No 132
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.05 E-value=36 Score=17.98 Aligned_cols=14 Identities=21% Similarity=0.634 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ytm_A 9 GEKPYKCMECGKAF 22 (46)
T ss_dssp SCCSSSBTTTTBCC
T ss_pred CCCCcCCCCCCchh
Confidence 34569999998643
No 133
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.04 E-value=34 Score=17.99 Aligned_cols=13 Identities=15% Similarity=0.797 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2emp_A 9 GVKPYMCNECGKA 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCcCeECCCCCch
Confidence 4456999999864
No 134
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.90 E-value=34 Score=18.00 Aligned_cols=13 Identities=23% Similarity=0.889 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~~~~~C~~C~k~ 21 (46)
T 2ytk_A 9 GEKPYKCNECGKV 21 (46)
T ss_dssp SSCSEECSSSCCE
T ss_pred CCCCEeCCcCCCc
Confidence 4456999999864
No 135
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.78 E-value=34 Score=18.01 Aligned_cols=13 Identities=23% Similarity=0.889 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2yu8_A 9 GEKPYKCNECGKV 21 (46)
T ss_dssp CCSSEECSSSCCE
T ss_pred CCCCeECCcCCch
Confidence 4456999999864
No 136
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.60 E-value=35 Score=17.91 Aligned_cols=14 Identities=29% Similarity=0.819 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2eme_A 9 GEKPYVCDYCGKAF 22 (46)
T ss_dssp CCCSEECSSSCCEE
T ss_pred CCCCeECCCCChhh
Confidence 34569999998643
No 137
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.50 E-value=35 Score=17.95 Aligned_cols=13 Identities=23% Similarity=0.843 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2eq0_A 9 GEKPYKCHECGKV 21 (46)
T ss_dssp CCCCEECTTTCCE
T ss_pred CCCCeECCCCCch
Confidence 3456999999864
No 138
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.39 E-value=36 Score=17.91 Aligned_cols=14 Identities=21% Similarity=0.532 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2em8_A 9 GEKPYKCVECGKGY 22 (46)
T ss_dssp SCCSEECSSSCCEE
T ss_pred CCCCeECcccCchh
Confidence 44569999998643
No 139
>1kdl_A YOPD protein; yersinia, amphipathic alpha helix, beta turn, structural protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=21.27 E-value=49 Score=15.89 Aligned_cols=8 Identities=25% Similarity=0.550 Sum_probs=4.1
Q ss_pred HHHHHHHH
Q 025024 33 YCNSVLQA 40 (259)
Q Consensus 33 y~Ns~LQ~ 40 (259)
||+-+||.
T Consensus 3 fMkDvlql 10 (26)
T 1kdl_A 3 FMKDVLRL 10 (26)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45555554
No 140
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.26 E-value=34 Score=17.98 Aligned_cols=14 Identities=21% Similarity=0.828 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ene_A 9 GEKPYKCNECGKVF 22 (46)
T ss_dssp CSSSEECSSSCCEE
T ss_pred CCCCeECCCCCchh
Confidence 34569999998643
No 141
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.23 E-value=36 Score=17.89 Aligned_cols=14 Identities=29% Similarity=0.702 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2ytg_A 9 GEKPFKCGECGKSY 22 (46)
T ss_dssp SCCSEECTTTCCEE
T ss_pred CCCCeECCCCCccc
Confidence 44569999998653
No 142
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=21.13 E-value=35 Score=20.04 Aligned_cols=13 Identities=15% Similarity=0.350 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
|+..|.|+.|++.
T Consensus 29 ~ekp~~C~~C~k~ 41 (60)
T 4gzn_C 29 GYRPRSCPECGKC 41 (60)
T ss_dssp TCCCEECTTTCCE
T ss_pred CCcCeECCCCCCC
Confidence 4455999999864
No 143
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.02 E-value=37 Score=17.84 Aligned_cols=13 Identities=23% Similarity=0.646 Sum_probs=9.9
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2ep2_A 9 GEKPYECSICGKS 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCcCcCCCCCCcc
Confidence 4456999999864
No 144
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.97 E-value=37 Score=17.83 Aligned_cols=14 Identities=29% Similarity=0.743 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2ep0_A 9 GEKPYKCDVCHKSF 22 (46)
T ss_dssp TCCSEECSSSCCEE
T ss_pred CCCCeeCcccCccc
Confidence 44569999998643
No 145
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.96 E-value=40 Score=17.74 Aligned_cols=14 Identities=21% Similarity=0.712 Sum_probs=10.3
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2ytt_A 9 GEKPYQCSECGKSF 22 (46)
T ss_dssp CCCTTCCSSSCCCC
T ss_pred CCCCeeCCCCCccc
Confidence 44569999998643
No 146
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.89 E-value=35 Score=17.87 Aligned_cols=14 Identities=29% Similarity=0.693 Sum_probs=10.1
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~~~~~C~~C~k~f 22 (46)
T 2en8_A 9 GEKSHTCDECGKNF 22 (46)
T ss_dssp CCSSEECTTTCCEE
T ss_pred CCCCeECCCcCccc
Confidence 34569999998643
No 147
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.85 E-value=37 Score=17.77 Aligned_cols=14 Identities=21% Similarity=0.593 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2emm_A 9 GERPHKCNECGKSF 22 (46)
T ss_dssp CCCSEECSSSCCEE
T ss_pred CCCCeeCCCCChhh
Confidence 34569999998643
No 148
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=20.70 E-value=38 Score=17.75 Aligned_cols=14 Identities=21% Similarity=0.700 Sum_probs=10.2
Q ss_pred CCCccccccCCCcc
Q 025024 223 AEDKFFCDKCCRLV 236 (259)
Q Consensus 223 ~~~~~~C~~C~~~~ 236 (259)
++..|.|+.|++.-
T Consensus 9 ~~k~~~C~~C~k~f 22 (46)
T 2em9_A 9 GEKPYNCKECGKSF 22 (46)
T ss_dssp CCCSEECSSSCCEE
T ss_pred CCcCeECCcccccc
Confidence 34569999998643
No 149
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.59 E-value=31 Score=18.12 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=9.8
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 7 ~~k~~~C~~C~k~ 19 (45)
T 2epq_A 7 GEKPYSCPVCGLR 19 (45)
T ss_dssp SCCSSEETTTTEE
T ss_pred CCCCCcCCCCCcc
Confidence 3456999999864
No 150
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=20.40 E-value=31 Score=19.16 Aligned_cols=16 Identities=13% Similarity=0.285 Sum_probs=11.8
Q ss_pred CccccccCCCcceeee
Q 025024 225 DKFFCDKCCRLVIYTY 240 (259)
Q Consensus 225 ~~~~C~~C~~~~~~~~ 240 (259)
....||.||+.....+
T Consensus 5 ~~~~CE~CG~~g~~~~ 20 (43)
T 2w0t_A 5 EPAVCEMCGIVGTREA 20 (43)
T ss_dssp CEEECTTTCCEEETTT
T ss_pred ceehhhhhcCcchhhh
Confidence 4579999998765554
No 151
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.23 E-value=39 Score=17.72 Aligned_cols=13 Identities=31% Similarity=0.792 Sum_probs=9.7
Q ss_pred CCCccccccCCCc
Q 025024 223 AEDKFFCDKCCRL 235 (259)
Q Consensus 223 ~~~~~~C~~C~~~ 235 (259)
++..|.|+.|++.
T Consensus 9 ~~k~~~C~~C~k~ 21 (46)
T 2enc_A 9 GEKPFKCEECGKG 21 (46)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCCCcCCCCCCCc
Confidence 3456999999864
No 152
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=20.07 E-value=49 Score=23.35 Aligned_cols=16 Identities=19% Similarity=0.299 Sum_probs=11.6
Q ss_pred eeeeeccCCCcccccc
Q 025024 178 NETRCLRCETVTARDE 193 (259)
Q Consensus 178 ~~i~C~~C~~~s~~~e 193 (259)
....|..|+++....+
T Consensus 45 l~~~CrtCgY~~~~~~ 60 (133)
T 3qt1_I 45 LLFECRTCSYVEEAGS 60 (133)
T ss_dssp BCCBCSSSCCBCCCSC
T ss_pred eEEECCCCCCcEEcCC
Confidence 4689999998764433
Done!