Query 025025
Match_columns 259
No_of_seqs 138 out of 995
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 18:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n10_A PHL P I, pollen allerge 100.0 4.9E-63 1.7E-67 441.6 25.5 210 30-255 16-241 (241)
2 2hcz_X Beta-expansin 1A; domai 100.0 5.5E-63 1.9E-67 442.3 22.5 213 30-258 16-245 (245)
3 3d30_A YOAJ, expansin like pro 100.0 2.2E-52 7.4E-57 365.8 23.9 194 30-258 3-207 (208)
4 1wc2_A Endoglucanase; hydrolas 100.0 4E-31 1.4E-35 224.0 8.9 130 25-165 6-162 (181)
5 3ft1_A PHL P 3 allergen; beta- 99.9 8.2E-28 2.8E-32 187.6 12.0 91 165-257 3-99 (100)
6 2jnz_A PHL P 3 allergen; timot 99.9 5.4E-26 1.9E-30 179.3 11.7 89 165-255 14-107 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 8E-26 2.8E-30 175.2 -1.3 88 165-255 3-95 (96)
8 1bw3_A Barwin, basic barley SE 99.6 1.5E-16 5.3E-21 128.0 5.5 62 77-161 58-124 (125)
9 4avr_A PA4485; unknown functio 99.2 1E-10 3.6E-15 89.9 11.8 93 34-159 2-95 (95)
10 2kqa_A Cerato-platanin; elicit 97.9 3.8E-05 1.3E-09 61.7 8.0 66 68-159 52-120 (129)
11 3m3g_A EPL1 protein; fungal, p 97.9 3.1E-05 1.1E-09 61.6 7.2 65 68-159 46-114 (120)
12 3sul_A Cerato-platanin-like pr 97.8 3.7E-05 1.3E-09 61.4 7.2 67 68-159 46-116 (122)
13 3suj_A Cerato-platanin 1; doub 97.7 8.3E-05 2.8E-09 59.7 7.5 70 68-159 46-119 (127)
14 3suk_A Cerato-platanin-like pr 97.7 8.5E-05 2.9E-09 59.5 6.9 69 68-159 47-119 (125)
15 3sum_A Cerato-platanin-like pr 97.6 0.00018 6.1E-09 58.2 8.2 64 68-159 50-121 (136)
16 2eng_A Endoglucanase V; cellul 95.2 0.01 3.5E-07 51.1 3.2 53 68-137 72-124 (210)
17 3nrl_A Uncharacterized protein 64.6 6 0.00021 28.9 3.4 21 71-91 22-42 (81)
18 3pe9_A Fibronectin(III)-like m 44.4 72 0.0025 23.6 6.7 47 187-236 29-77 (98)
19 3nct_A Protein PSIB; DNA bindi 39.8 40 0.0014 27.0 4.7 45 149-197 58-106 (144)
20 2kct_A Cytochrome C-type bioge 37.0 32 0.0011 25.6 3.6 29 223-251 30-62 (94)
21 1sr3_A APO-CCME; OB fold, beta 31.5 40 0.0014 26.8 3.6 29 223-251 50-79 (136)
22 2a9d_A Sulfite oxidase; molybd 29.9 74 0.0025 29.2 5.6 54 181-234 276-343 (372)
23 1ogp_A Sulfite oxidase; oxidor 29.0 68 0.0023 29.7 5.3 54 181-234 289-361 (393)
24 1j6q_A Cytochrome C maturation 27.9 57 0.0019 25.9 3.9 29 223-251 54-84 (136)
25 2blf_A SORA, sulfite\:cytochro 27.0 51 0.0017 30.4 3.9 53 181-234 286-347 (373)
26 1sox_A Sulfite oxidase; oxidor 25.6 86 0.0029 29.7 5.3 54 181-234 370-437 (466)
No 1
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=4.9e-63 Score=441.56 Aligned_cols=210 Identities=29% Similarity=0.619 Sum_probs=187.5
Q ss_pred CCCeeEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEE
Q 025025 30 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILIT 107 (259)
Q Consensus 30 ~~~~~~g~aT~Yg~~~~~g~--~~GaCGyg~~~~~~~~~~~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~ 107 (259)
.++|+.|+||||+++++.|+ ++|||||++++..|++.++||+|+++|++|++||+||||+|.++| .|.++ +|+|+
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~-~C~~~--~v~V~ 92 (241)
T 1n10_A 16 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPE-ACSGE--PVVVH 92 (241)
T ss_dssp CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSST-TBCSC--CEEEE
T ss_pred cCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCC-ccCCC--CEEEE
Confidence 47899999999999987777 789999999888889999999999999999999999999998754 69865 89999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhcc-------ccCCeEEEEEEEeecccCC--ceEEEEc--CcCcE
Q 025025 108 ATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG--GIRFTIN--GFRYF 176 (259)
Q Consensus 108 VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~-------~~~G~v~i~~r~V~C~~~g--ni~~~v~--ss~yw 176 (259)
|||+|+ |..+..|||||+.||.+||. +..|+|+|+||||+|+++| ||+|+|+ |++||
T Consensus 93 VtD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~ 160 (241)
T 1n10_A 93 ITDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNY 160 (241)
T ss_dssp EEEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTE
T ss_pred EeEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcce
Confidence 999996 55467999999999999999 6899999999999999984 8999999 79999
Q ss_pred EEEEEEeecCCcceeEEEEEecC-cceeEcccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCcEEe
Q 025025 177 NLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQNWQSNAQ--LVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 253 (259)
Q Consensus 177 ~~v~v~n~~g~~~I~sVei~~~g-~~w~~m~r~~gn~W~~~~~--~~g~p~~vRvTs~~G~~v~a~~viP~~w~~G~~y~ 253 (259)
++|||+|++|.++|++|||++++ +.|++|+|+|||+|+++.. |.+ ||+||||+.+|++|+++||||++|++|++|+
T Consensus 161 ~~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 161 LALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp EEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEE
T ss_pred EEEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEe
Confidence 99999999999999999999987 5899999999999999774 777 9999999999999999999999999999999
Q ss_pred cC
Q 025025 254 GK 255 (259)
Q Consensus 254 ~~ 255 (259)
++
T Consensus 240 ~~ 241 (241)
T 1n10_A 240 SK 241 (241)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=5.5e-63 Score=442.30 Aligned_cols=213 Identities=32% Similarity=0.635 Sum_probs=196.5
Q ss_pred CCCeeEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEE
Q 025025 30 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILIT 107 (259)
Q Consensus 30 ~~~~~~g~aT~Yg~~~~~g~--~~GaCGyg~~~~~~~~~~~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~ 107 (259)
..+|+.|+||||+++++.|+ ++|||||++++..|++.++||+|+++|++|++||+||||+|.+++ .|..+ +|+|+
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~-~C~~~--sv~V~ 92 (245)
T 2hcz_X 16 NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKP-ECSGN--PVTVY 92 (245)
T ss_dssp CCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSS-SBCSS--CEEEE
T ss_pred CCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCC-ccCCC--CEEEE
Confidence 37899999999999988777 789999999887889999999999999999999999999998754 69864 89999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhcc-------ccCCeEEEEEEEeecccCC--ceEEEEc--CcCcE
Q 025025 108 ATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG--GIRFTIN--GFRYF 176 (259)
Q Consensus 108 VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~-------~~~G~v~i~~r~V~C~~~g--ni~~~v~--ss~yw 176 (259)
|||+||+ ..+..|||||+.||++||. +..|+|+|+||+|+|+++| ||+|+++ |++||
T Consensus 93 VtD~C~C------------~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~ 160 (245)
T 2hcz_X 93 ITDMNYE------------PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNY 160 (245)
T ss_dssp EEEECCC------------TTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSC
T ss_pred EEeccCC------------CCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcce
Confidence 9999985 3367999999999999999 6899999999999999984 7999999 79999
Q ss_pred EEEEEEeecCCcceeEEEEEecC-cceeEcccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCcEEe
Q 025025 177 NLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQNWQSNAQ--LVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 253 (259)
Q Consensus 177 ~~v~v~n~~g~~~I~sVei~~~g-~~w~~m~r~~gn~W~~~~~--~~g~p~~vRvTs~~G~~v~a~~viP~~w~~G~~y~ 253 (259)
++|||.|++|+++|++|||++++ +.|++|+|+|||+|+++.. |++ ||+||||+.+|++|++.||||++|++|++|+
T Consensus 161 ~avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (245)
T 2hcz_X 161 LAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYT 239 (245)
T ss_dssp CCEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEE
T ss_pred EEEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEe
Confidence 99999999999999999999987 4899999999999999874 777 9999999999999999999999999999999
Q ss_pred cC-cee
Q 025025 254 GK-NFR 258 (259)
Q Consensus 254 ~~-qf~ 258 (259)
+. ||+
T Consensus 240 ~~~qf~ 245 (245)
T 2hcz_X 240 SNVQFY 245 (245)
T ss_dssp CSCCCC
T ss_pred CccccC
Confidence 97 984
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=2.2e-52 Score=365.78 Aligned_cols=194 Identities=20% Similarity=0.289 Sum_probs=174.6
Q ss_pred CCCeeEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCC----CCCCceEEEEEcCCCCCCCCCCCcEE
Q 025025 30 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG----LSCGACFELKCGGDPQWCNPGNPAIL 105 (259)
Q Consensus 30 ~~~~~~g~aT~Yg~~~~~g~~~GaCGyg~~~~~~~~~~~aA~s~~~y~~g----~~CG~C~eV~c~~~p~~C~~g~~sv~ 105 (259)
-++.+.|+||||++.. .+||||++. .|++.++||+|+.+|++| ..||+||||+|. + ++|+
T Consensus 3 ~~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~--------~-gsv~ 66 (208)
T 3d30_A 3 YDDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP--------K-GKTT 66 (208)
T ss_dssp TTCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET--------T-EEEE
T ss_pred CCCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC--------C-CcEE
Confidence 4567899999999753 479999864 356789999999999987 899999999993 2 3899
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhccccCCeEEEEEEEeecccCCceEEEEc--CcCcEEEEEEEe
Q 025025 106 ITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTIN--GFRYFNLVLVTN 183 (259)
Q Consensus 106 V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~~~~G~v~i~~r~V~C~~~gni~~~v~--ss~yw~~v~v~n 183 (259)
|+|+|+||. | +..|||||+.||.+||.++.|+++|+||+|+|+++|+|+|+++ |++||++|||+|
T Consensus 67 V~v~D~CP~-----------C--~~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n 133 (208)
T 3d30_A 67 VYVTDLYPE-----------G--ARGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRN 133 (208)
T ss_dssp EEEEEECTT-----------C--CTTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEES
T ss_pred EEEEECCCC-----------C--CCCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEe
Confidence 999999998 8 5789999999999999999999999999999999999999999 899999999999
Q ss_pred ecCCcceeEEEEEecCcceeEcccCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCC----CcEEecC-cee
Q 025025 184 VAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQF----GQTFSGK-NFR 258 (259)
Q Consensus 184 ~~g~~~I~sVei~~~g~~w~~m~r~~gn~W~~~~~~~g~p~~vRvTs~~G~~v~a~~viP~~w~~----G~~y~~~-qf~ 258 (259)
++| +|++|||+++ +.|++|+|+|+|+|..+..+.+ ||+||||+.+|++| .+|||++|++ |.+|++. ||.
T Consensus 134 ~~g--~v~~v~i~~~-~~W~~m~r~~~n~~~~~~~~~~-pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~ 207 (208)
T 3d30_A 134 HKY--PVMKMEYEKD-GKWINMEKMDYNHFVSTNLGTG-SLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQFP 207 (208)
T ss_dssp CSS--CEEEEEEEET-TEEEEEEECTTSCEEEECCCSS-SEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCCC
T ss_pred cCC--CEEEEEEecC-CcEEEccccccceeecCCCCCC-CEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCccC
Confidence 985 9999999987 5899999999998987655554 99999999999999 7999999997 8999987 995
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.97 E-value=4e-31 Score=223.96 Aligned_cols=130 Identities=26% Similarity=0.388 Sum_probs=107.4
Q ss_pred CCccCCCCeeEEEEEEeCCCCCCCCCccccCCC-----cCCCCCCCCeEEEechhccCCC------CCCCceEEEEEcCC
Q 025025 25 PGVFAGGPWQSAHATFYGGSDASGTMGGACGYG-----NLYSQGYGVNTAALSTALFNNG------LSCGACFELKCGGD 93 (259)
Q Consensus 25 ~~~~~~~~~~~g~aT~Yg~~~~~g~~~GaCGyg-----~~~~~~~~~~~aA~s~~~y~~g------~~CG~C~eV~c~~~ 93 (259)
+++.+=.+|..++||||++. .+|||||+ ++.+.+++.++||+|+++|++| +.||+||||+|.++
T Consensus 6 ~~~~~~~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~ 80 (181)
T 1wc2_A 6 GNPRRYNGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGG 80 (181)
T ss_dssp TTTTEETTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEE
T ss_pred CCCcccCCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCC
Confidence 45544467999999999985 47999999 4555567889999999999997 89999999999765
Q ss_pred C-----CCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCC-----------CCceEechHHHHhhccccCCeEEEEEEE
Q 025025 94 P-----QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPP-----------RPHFDLAMPMFLKLAQYRAGIVPVSYRR 157 (259)
Q Consensus 94 p-----~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~-----------~~~fDLS~~AF~~ia~~~~G~v~i~~r~ 157 (259)
| ..|.++ ++|+|||||.||.+ .+|++||..+ +.||||+..| .+||....|+++|+|||
T Consensus 81 ~c~~cg~~~~~g-~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrr 154 (181)
T 1wc2_A 81 YVPGQGGPVREG-LSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEV 154 (181)
T ss_dssp ECTTSCCCCCTT-CEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEE
T ss_pred CcccccccCCCC-CeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEE
Confidence 4 234555 59999999999953 3578999643 6899999999 89999999999999999
Q ss_pred eecccCCc
Q 025025 158 VPCRKRGG 165 (259)
Q Consensus 158 V~C~~~gn 165 (259)
|+|+..++
T Consensus 155 V~C~~~~~ 162 (181)
T 1wc2_A 155 VNCDSEHN 162 (181)
T ss_dssp ECHHHHHH
T ss_pred EeCCCCCC
Confidence 99997433
No 5
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.95 E-value=8.2e-28 Score=187.61 Aligned_cols=91 Identities=16% Similarity=0.367 Sum_probs=86.4
Q ss_pred ceEEEEc--CcCcEEEEEEEeecCCcceeEEEEEecCc-ceeEcccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025025 165 GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNWQSNA--QLVGQALSFRVTGSDRRTSTSW 239 (259)
Q Consensus 165 ni~~~v~--ss~yw~~v~v~n~~g~~~I~sVei~~~g~-~w~~m~r~~gn~W~~~~--~~~g~p~~vRvTs~~G~~v~a~ 239 (259)
+|+|+|+ |++||++|+|.|++|+++|.+||||++++ .|++|+| ||++|++++ +|++ ||+||||+.+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~~ 80 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 80 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 7999999 79999999999999999999999999985 7999999 999999986 7888 99999999999999999
Q ss_pred cccCCCCCCCcEEecC-ce
Q 025025 240 NVAPANWQFGQTFSGK-NF 257 (259)
Q Consensus 240 ~viP~~w~~G~~y~~~-qf 257 (259)
||||++|++|++|++. ||
T Consensus 81 nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 81 EVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEECTTCCTTCEECCCCBC
T ss_pred eEeCCCCCCCcEEeccccc
Confidence 9999999999999986 86
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.93 E-value=5.4e-26 Score=179.33 Aligned_cols=89 Identities=17% Similarity=0.403 Sum_probs=83.9
Q ss_pred ceEEEEc--CcCcEEEEEEEeecCCcceeEEEEEe-cCcceeEcccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025025 165 GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKG-ANTQWLSMSRNWGQNWQSNA--QLVGQALSFRVTGSDRRTSTSW 239 (259)
Q Consensus 165 ni~~~v~--ss~yw~~v~v~n~~g~~~I~sVei~~-~g~~w~~m~r~~gn~W~~~~--~~~g~p~~vRvTs~~G~~v~a~ 239 (259)
||.|+|+ |++||++|+|.|++|+++|.+||||+ +.+.|++|+|+ |++|+++. +|.| ||+||||+.+|+++++.
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~ 91 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 91 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 8999999 79999999999999999999999997 44689999999 99999986 7888 99999999999999999
Q ss_pred cccCCCCCCCcEEecC
Q 025025 240 NVAPANWQFGQTFSGK 255 (259)
Q Consensus 240 ~viP~~w~~G~~y~~~ 255 (259)
||||++|++|++|++.
T Consensus 92 nViPa~W~~Gqty~s~ 107 (108)
T 2jnz_A 92 EVIPTAFSIGKTYKPE 107 (108)
T ss_dssp EEECSSCCTTCEECCC
T ss_pred eEECCCCCCCCEEeCC
Confidence 9999999999999974
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.90 E-value=8e-26 Score=175.21 Aligned_cols=88 Identities=20% Similarity=0.430 Sum_probs=81.8
Q ss_pred ceEEEEc--CcCcEEEEEEEeecCCcceeEEEEEec-CcceeEcccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025025 165 GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGA-NTQWLSMSRNWGQNWQSNA--QLVGQALSFRVTGSDRRTSTSW 239 (259)
Q Consensus 165 ni~~~v~--ss~yw~~v~v~n~~g~~~I~sVei~~~-g~~w~~m~r~~gn~W~~~~--~~~g~p~~vRvTs~~G~~v~a~ 239 (259)
+|+|+|+ |++||++|+|.|++ ++|.+||||++ .+.|++|+|+||++|+++. +|+| ||+||||+.+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence 7899999 89999999999998 79999999995 4789999999999999987 6778 99999999999999999
Q ss_pred cccCCCCCCCcEEecC
Q 025025 240 NVAPANWQFGQTFSGK 255 (259)
Q Consensus 240 ~viP~~w~~G~~y~~~ 255 (259)
||||++|++|++|++.
T Consensus 80 nViP~~W~~G~ty~~~ 95 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPE 95 (96)
T ss_dssp SCSCSSCCSSSCCCC-
T ss_pred eEeCCCCCCCCEEeCC
Confidence 9999999999999974
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.63 E-value=1.5e-16 Score=128.04 Aligned_cols=62 Identities=26% Similarity=0.548 Sum_probs=55.9
Q ss_pred CCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEec-hHHHHhhcc----ccCCeE
Q 025025 77 NNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLA-MPMFLKLAQ----YRAGIV 151 (259)
Q Consensus 77 ~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS-~~AF~~ia~----~~~G~v 151 (259)
+++..||+|++|++.. ++++|+|+|+|+||. | +|||| +.||++|+. ++.|++
T Consensus 58 ~~g~~CG~cv~Vtn~~-------nGksV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i 114 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPA-------TGAQITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHL 114 (125)
T ss_dssp CSGGGTTCEEEEEETT-------TTEEEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEE
T ss_pred CCCcccCCEEEeEeCC-------CCCEEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEE
Confidence 6789999999999954 236999999999997 5 49999 999999998 789999
Q ss_pred EEEEEEeecc
Q 025025 152 PVSYRRVPCR 161 (259)
Q Consensus 152 ~i~~r~V~C~ 161 (259)
+|+|++|+|+
T Consensus 115 ~V~w~~V~C~ 124 (125)
T 1bw3_A 115 NVNYQFVDCR 124 (125)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEEeCC
Confidence 9999999997
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.23 E-value=1e-10 Score=89.88 Aligned_cols=93 Identities=20% Similarity=0.255 Sum_probs=73.0
Q ss_pred eEEEEEEeCCC-CCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCC
Q 025025 34 QSAHATFYGGS-DASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFC 112 (259)
Q Consensus 34 ~~g~aT~Yg~~-~~~g~~~GaCGyg~~~~~~~~~~~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~C 112 (259)
..|.|+||+.. .+ ...|||=... ...++||-.+ ..||...+|+... ++++|+|+|.|.|
T Consensus 2 ~~G~ASwYg~~f~G---~~TA~Ge~~~----~~~~tAAH~t------lP~gt~vrVtNl~-------nGksVvVrVnDRG 61 (95)
T 4avr_A 2 DTGEASYYGSRHAG---LRTASGERYN----PNAMTAAHRT------LPFGARVRVTNLD-------NRRSVVVRINDRG 61 (95)
T ss_dssp EEEEEEECCGGGTT---SBCTTSCBCC----TTSCEEECSS------SCTTCEEEEEETT-------TCCEEEEEEEECC
T ss_pred CEEEEEEECCccCC---CCCCCccCcC----CCCCEEEcCC------CCCCcEEEEEECC-------CCcEEEEEEccCC
Confidence 47999999963 22 2578874331 2346777764 4799999999965 3479999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCceEechHHHHhhccccCCeEEEEEEEee
Q 025025 113 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVP 159 (259)
Q Consensus 113 P~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~~~~G~v~i~~r~V~ 159 (259)
|. |. ...+|||..||++|+....|+.+|+|+.+.
T Consensus 62 P~-----------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~~ 95 (95)
T 4avr_A 62 PF-----------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESLD 95 (95)
T ss_dssp CC-----------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC-
T ss_pred CC-----------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEeC
Confidence 97 63 468999999999999999999999999863
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=97.89 E-value=3.8e-05 Score=61.72 Aligned_cols=66 Identities=26% Similarity=0.465 Sum_probs=53.2
Q ss_pred EEEechh-ccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhcc-
Q 025025 68 TAALSTA-LFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ- 145 (259)
Q Consensus 68 ~aA~s~~-~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~- 145 (259)
|.+.... -|+ ...||.|++|+-.. + ++|.|+.+|.=+ ..|+++.+||+.|..
T Consensus 52 IGga~~iagWN-S~~CGtC~~lty~n-------g-~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G 105 (129)
T 2kqa_A 52 VGGIPDIAGWD-SPSCGTCWKVTIPN-------G-NSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGS 105 (129)
T ss_dssp EEEETTCCSTT-CTTCSCEEEEEETT-------T-EEEEEEEEEECS-----------------SSEEECHHHHHHHHSS
T ss_pred eccchhhccCC-CCCCCceEEEEEcC-------C-CEEEEEEEccCC-----------------CceeehHHHHHHhcCC
Confidence 5555443 466 78999999999841 3 699999999744 369999999999987
Q ss_pred ccCCeE-EEEEEEee
Q 025025 146 YRAGIV-PVSYRRVP 159 (259)
Q Consensus 146 ~~~G~v-~i~~r~V~ 159 (259)
...|+| +++|++|+
T Consensus 106 ~~lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 106 TEAGRVDNVNYVQVD 120 (129)
T ss_dssp SSSCCBCSCEEEECC
T ss_pred cccCcEeEEEEEEcC
Confidence 677999 99999996
No 11
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=97.87 E-value=3.1e-05 Score=61.63 Aligned_cols=65 Identities=26% Similarity=0.515 Sum_probs=50.7
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhcc-
Q 025025 68 TAALST-ALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ- 145 (259)
Q Consensus 68 ~aA~s~-~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~- 145 (259)
|.+... .-|+ ...||.|+||+-. + ++|.|..+|.=+ ..|+|+.+||+.|.+
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~--------g-~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G 98 (120)
T 3m3g_A 46 IGGAAAVAGWN-SASCGTCWKLQYS--------G-HTIYVLAVDHAA-----------------SGFNIALDAMNALTGG 98 (120)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEET--------T-EEEEEEEEEECS-----------------SSEEECHHHHHHHHTS
T ss_pred cccccccccCC-CCCCCceEEEEEC--------C-eEEEEEEEecCC-----------------CceeecHHHHHHhhCC
Confidence 544433 3455 4799999999983 3 699999999744 359999999999985
Q ss_pred c--cCCeEEEEEEEee
Q 025025 146 Y--RAGIVPVSYRRVP 159 (259)
Q Consensus 146 ~--~~G~v~i~~r~V~ 159 (259)
. ..|+|+++|++|+
T Consensus 99 ~a~~lG~V~a~~~~V~ 114 (120)
T 3m3g_A 99 QAVQLGRVSATATQVP 114 (120)
T ss_dssp CHHHHCEEECEEEEEC
T ss_pred cceeeeeEeEEEEEcC
Confidence 2 4499999999997
No 12
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=97.84 E-value=3.7e-05 Score=61.37 Aligned_cols=67 Identities=21% Similarity=0.385 Sum_probs=52.3
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhccc
Q 025025 68 TAALST-ALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY 146 (259)
Q Consensus 68 ~aA~s~-~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~~ 146 (259)
|.+... +-|++ ..||.|+|++-.. .+++|.|..+|.=++ .|+|+.+||+.|.+-
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~-------~g~si~vlaID~a~~-----------------Gfnis~~Amn~LT~G 100 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSG-------TGKTIHVVGVDVAGN-----------------GFNVGQRAMDDLTNG 100 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETT-------TTEEEEEEEEEECSS-----------------SEEECHHHHHHHHTS
T ss_pred cccccccccCCC-CCCCceEEEEEcC-------CCcEEEEEEEecCCC-----------------ceeehHHHHHHhcCC
Confidence 544443 34655 8999999999842 236999999997443 599999999999852
Q ss_pred ---cCCeEEEEEEEee
Q 025025 147 ---RAGIVPVSYRRVP 159 (259)
Q Consensus 147 ---~~G~v~i~~r~V~ 159 (259)
..|+|+++|++|+
T Consensus 101 ~a~~lG~V~a~~~qV~ 116 (122)
T 3sul_A 101 QAVALGNIDVTATLVD 116 (122)
T ss_dssp CHHHHSEEEEEEEEEC
T ss_pred cceecceEeEEEEEcC
Confidence 4599999999997
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.73 E-value=8.3e-05 Score=59.74 Aligned_cols=70 Identities=23% Similarity=0.383 Sum_probs=51.6
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhccc
Q 025025 68 TAALST-ALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY 146 (259)
Q Consensus 68 ~aA~s~-~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~~ 146 (259)
|.+... .-|+ ...||.|+|++-.+. . ...++|.|..+|.=++ .|+|+.+||+.|.+-
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~g~-~---~~~~si~vlaID~a~~-----------------Gfnis~~Amn~LT~g 103 (127)
T 3suj_A 46 IGGSSDIAGYN-SPNCGSCYQLTYSSA-H---TTPKSIYMVAIDRSAE-----------------GFTASKQAMDDLTNK 103 (127)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEECCS-S---SCCEEEEEEEEEECSS-----------------SEEECHHHHHHHHTS
T ss_pred eccccccccCC-CCCCCceEEEEECCC-C---CcceEEEEEEEecCCC-----------------ceeecHHHHHHhcCC
Confidence 444432 3455 479999999998541 0 0126999999997543 599999999999852
Q ss_pred ---cCCeEEEEEEEee
Q 025025 147 ---RAGIVPVSYRRVP 159 (259)
Q Consensus 147 ---~~G~v~i~~r~V~ 159 (259)
..|+|+++|++|+
T Consensus 104 ~a~~lG~V~~~~~~V~ 119 (127)
T 3suj_A 104 RAEELGTVNVDVRKVD 119 (127)
T ss_dssp CHHHHSSEEEEEEEEC
T ss_pred ccccceeEEEEEEEeC
Confidence 4589999999997
No 14
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.68 E-value=8.5e-05 Score=59.54 Aligned_cols=69 Identities=22% Similarity=0.338 Sum_probs=51.9
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhcc-
Q 025025 68 TAALST-ALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ- 145 (259)
Q Consensus 68 ~aA~s~-~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~- 145 (259)
|.+... .-|++ ..||.|+|++-.+ |. .+++|.|..+|.=++ .|+|+.+||+.|.+
T Consensus 47 IGg~~~i~gwnS-~~CGtC~~lty~g-~~----~~~si~vlaID~a~~-----------------Gfnis~~Amn~LT~G 103 (125)
T 3suk_A 47 IGASSDIGGFNS-PACGNCYTISFTF-QG----VTRSINLVAIDHAGN-----------------GFNVAQAAMDELTNG 103 (125)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEEEE-TT----EEEEEEEEEEEECSS-----------------SEEECHHHHHHHHTS
T ss_pred eccccccccCCC-CCCCeeEEEEEcC-CC----cceEEEEEEEecCCC-----------------ceeecHHHHHHhcCC
Confidence 544433 34554 7999999999853 11 236999999997443 59999999999986
Q ss_pred --ccCCeEEEEEEEee
Q 025025 146 --YRAGIVPVSYRRVP 159 (259)
Q Consensus 146 --~~~G~v~i~~r~V~ 159 (259)
...|+|+++|++|+
T Consensus 104 ~a~~lG~V~~~~~~V~ 119 (125)
T 3suk_A 104 NAVALGTIDVQSQQVA 119 (125)
T ss_dssp CHHHHCEEEEEEEEEC
T ss_pred cccccceEeEEEEEcC
Confidence 24599999999997
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.64 E-value=0.00018 Score=58.22 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=50.1
Q ss_pred EEEechhccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhccc-
Q 025025 68 TAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY- 146 (259)
Q Consensus 68 ~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~~- 146 (259)
|.+.. |+ ...||.|+||+-. | ++|.|..+|.=.+ ..-|||+.+||+.|..-
T Consensus 50 igg~~---wn-s~~CGtCwkLtY~--------G-~sI~vlaID~a~~---------------g~~FnIs~~Amn~LT~G~ 101 (136)
T 3sum_A 50 FVAAP---EA-QTECGSCWKLRYK--------G-NHAFVTVVDRVEE---------------ANLFVGGTDLVKNLTTFN 101 (136)
T ss_dssp EEECC---BT-TBCTTCEEEEEET--------T-EEEEEEEEECCCS---------------TTEEEECHHHHHHHTCBT
T ss_pred ccccc---cC-CCCCCceEEEEEC--------C-eEEEEEEEecCCC---------------cceEeehHHHHHHHhCCC
Confidence 55554 44 5799999999983 3 5999999997443 12399999999999753
Q ss_pred ------cCCeEEE-EEEEee
Q 025025 147 ------RAGIVPV-SYRRVP 159 (259)
Q Consensus 147 ------~~G~v~i-~~r~V~ 159 (259)
..|+|++ +|++|+
T Consensus 102 ~a~~a~elG~Vda~~~~qVd 121 (136)
T 3sum_A 102 GAPEGYDWGTAQLFSAYQVD 121 (136)
T ss_dssp TBCHHHHHSEEECSEEEEEC
T ss_pred ccccceecceeeeeEEEEcC
Confidence 3599999 999997
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=95.23 E-value=0.01 Score=51.07 Aligned_cols=53 Identities=32% Similarity=0.416 Sum_probs=34.6
Q ss_pred EEEechhccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEech
Q 025025 68 TAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAM 137 (259)
Q Consensus 68 ~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~ 137 (259)
+||++-.--.....|++|||++-++.+. .| |+.+|+||+...+- ..+||||.-
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~~---~G-KkmiVQ~TNtG~Dl-------------~~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGPV---AG-KKMVVQSTSTGGDL-------------GSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGGG---TT-CEEEEEEEEC------------------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCCCc---CC-CEEEEEEecccCCC-------------CCCceeEec
Confidence 5666532122236899999999987542 24 79999999987651 468999964
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=64.59 E-value=6 Score=28.93 Aligned_cols=21 Identities=38% Similarity=0.931 Sum_probs=16.8
Q ss_pred echhccCCCCCCCceEEEEEc
Q 025025 71 LSTALFNNGLSCGACFELKCG 91 (259)
Q Consensus 71 ~s~~~y~~g~~CG~C~eV~c~ 91 (259)
.+...|.+|..||.|+||.-.
T Consensus 22 ~~~~~~ygGlHCGE~feV~v~ 42 (81)
T 3nrl_A 22 FDLESFYGGLHCGECFDVKVK 42 (81)
T ss_dssp EETTEECCCCCTTCEEEEEET
T ss_pred eccccccCCcccccEEEEEEC
Confidence 344567889999999999874
No 18
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=44.38 E-value=72 Score=23.57 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=30.0
Q ss_pred CcceeEEEEEecCc-ceeEcccCCCceEEeCCCCCCc-ceEEEEEecCCcEE
Q 025025 187 AGDIVRVSVKGANT-QWLSMSRNWGQNWQSNAQLVGQ-ALSFRVTGSDRRTS 236 (259)
Q Consensus 187 ~~~I~sVei~~~g~-~w~~m~r~~gn~W~~~~~~~g~-p~~vRvTs~~G~~v 236 (259)
++.|.+||+...+. -...-.+.|.-.|... .|. .+..|.||..|.+-
T Consensus 29 dg~V~kVef~vdg~~vg~dt~apy~~~w~~~---~G~htl~a~AtD~~G~~~ 77 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDREAPYEYEWKAV---EGNHEISVIAYDDDDAAS 77 (98)
T ss_dssp SSCEEEEEEEETTEEEEEECSSSEEEEEECC---SEEEEEEEEEEETTCCBC
T ss_pred CCCEEEEEEEECCEEecccccCCEEEEEEcC---CccEEEEEEEEECCCCEE
Confidence 35799999998763 2334444444456654 343 67778889888643
No 19
>3nct_A Protein PSIB; DNA binding protein, chaperone; 2.20A {Escherichia coli}
Probab=39.82 E-value=40 Score=27.01 Aligned_cols=45 Identities=29% Similarity=0.458 Sum_probs=25.7
Q ss_pred CeEEEEEEEeecccCCceEEEEcC----cCcEEEEEEEeecCCcceeEEEEEe
Q 025025 149 GIVPVSYRRVPCRKRGGIRFTING----FRYFNLVLVTNVAGAGDIVRVSVKG 197 (259)
Q Consensus 149 G~v~i~~r~V~C~~~gni~~~v~s----s~yw~~v~v~n~~g~~~I~sVei~~ 197 (259)
|-++|.-|+-|=. ++..+.+=| +|+|+.|++ +.+| -++.-|....
T Consensus 58 GffPVq~RfsP~~--~~f~l~vCSpG~~sP~W~~Vl~-~~gG-~pfavv~~~~ 106 (144)
T 3nct_A 58 GFFPVQVRFTPAH--ERFHLALCSPGDVSQVWVLVLV-NAGG-EPFAVVQVQR 106 (144)
T ss_dssp SCSSSEEEEEETT--CSEEEEEECSSSSCSSEEEEEE-EGGG-CSEEEEEEES
T ss_pred ceeeEEEEEcCCC--CceEEEEeCCCCCCcceEEEEE-cCCC-cEEEEEEecC
Confidence 4445555554422 455555432 899998887 4555 3666555553
No 20
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=36.97 E-value=32 Score=25.65 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=22.0
Q ss_pred ceEEEEEecC--Cc--EEEEccccCCCCCCCcE
Q 025025 223 ALSFRVTGSD--RR--TSTSWNVAPANWQFGQT 251 (259)
Q Consensus 223 p~~vRvTs~~--G~--~v~a~~viP~~w~~G~~ 251 (259)
.++|+|||.+ ++ .|++..++|..|+.|+-
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqg 62 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVE 62 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTCE
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCCe
Confidence 5899999862 44 45567899999998864
No 21
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=31.53 E-value=40 Score=26.84 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=21.7
Q ss_pred ceEEEEEecCCc-EEEEccccCCCCCCCcE
Q 025025 223 ALSFRVTGSDRR-TSTSWNVAPANWQFGQT 251 (259)
Q Consensus 223 p~~vRvTs~~G~-~v~a~~viP~~w~~G~~ 251 (259)
.++|+|||.... .|++..++|..|+.|.-
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGqg 79 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQG 79 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTSE
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCCe
Confidence 588888885443 55667899999998764
No 22
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=29.95 E-value=74 Score=29.24 Aligned_cols=54 Identities=19% Similarity=0.349 Sum_probs=32.0
Q ss_pred EEeecCCcceeEEEEEecCc-ceeEcccC---------CC-ceEEeCCC-CCC--cceEEEEEecCCc
Q 025025 181 VTNVAGAGDIVRVSVKGANT-QWLSMSRN---------WG-QNWQSNAQ-LVG--QALSFRVTGSDRR 234 (259)
Q Consensus 181 v~n~~g~~~I~sVei~~~g~-~w~~m~r~---------~g-n~W~~~~~-~~g--~p~~vRvTs~~G~ 234 (259)
+.+.+|..+|++|||...++ +|+...-. |- -.|++.-+ ..+ --+.+|-||.+|.
T Consensus 276 ~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~ 343 (372)
T 2a9d_A 276 YAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 343 (372)
T ss_dssp EEECSTTCCEEEEEEESBSSSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred EEEcCCCCCEEEEEEEcCCCCcceEeEcCCcccccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCC
Confidence 33444434799999998765 89976643 11 13664311 112 1466778888884
No 23
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=29.04 E-value=68 Score=29.70 Aligned_cols=54 Identities=15% Similarity=0.232 Sum_probs=33.0
Q ss_pred EEeecCCcceeEEEEEecCc-ceeEcccCC------------C-----ceEEeCCCCCC-cceEEEEEecCCc
Q 025025 181 VTNVAGAGDIVRVSVKGANT-QWLSMSRNW------------G-----QNWQSNAQLVG-QALSFRVTGSDRR 234 (259)
Q Consensus 181 v~n~~g~~~I~sVei~~~g~-~w~~m~r~~------------g-----n~W~~~~~~~g-~p~~vRvTs~~G~ 234 (259)
+.+.+|...|++|||...++ +|+..+-.. . -.|++.-.+.. .-+.+|-+|.+|.
T Consensus 289 ~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~vRA~D~~gn 361 (393)
T 1ogp_A 289 YAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAAN 361 (393)
T ss_dssp EEECSTTCCEEEEEEESSTTSSCEECEEESSSSSCCCSSSTTSCTTSCEEEEEEEEESSCEEEEEEEEETTCC
T ss_pred EEEcCCCCCEEEEEEEcCCCCCceEeeccCcCccccccccccCCCCEEEEEEEEEecCCCeEEEEEEEcCCCC
Confidence 44555456899999998765 898766322 1 14555321111 1566777888773
No 24
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=27.95 E-value=57 Score=25.91 Aligned_cols=29 Identities=24% Similarity=0.193 Sum_probs=22.2
Q ss_pred ceEEEEEecCCc--EEEEccccCCCCCCCcE
Q 025025 223 ALSFRVTGSDRR--TSTSWNVAPANWQFGQT 251 (259)
Q Consensus 223 p~~vRvTs~~G~--~v~a~~viP~~w~~G~~ 251 (259)
.++|+|||..++ .|++..++|+.|+.|.-
T Consensus 54 ~v~F~vtD~~~~~v~V~Y~GilPDlFrEGqg 84 (136)
T 1j6q_A 54 HVQFAVHDSLGGEILVTYDDLLPDLFREGQG 84 (136)
T ss_dssp CEEEEEECTTCCCEEEEECSCCTTSCCSSSE
T ss_pred EEEEEEEcCCCCEEEEEECCCCCccccCCCe
Confidence 589999994343 56677999999998864
No 25
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=26.96 E-value=51 Score=30.35 Aligned_cols=53 Identities=21% Similarity=0.405 Sum_probs=33.1
Q ss_pred EEeecCCcceeEEEEEecCc-ceeEcccC-----CC-ceEEeCC-CCCCc-ceEEEEEecCCc
Q 025025 181 VTNVAGAGDIVRVSVKGANT-QWLSMSRN-----WG-QNWQSNA-QLVGQ-ALSFRVTGSDRR 234 (259)
Q Consensus 181 v~n~~g~~~I~sVei~~~g~-~w~~m~r~-----~g-n~W~~~~-~~~g~-p~~vRvTs~~G~ 234 (259)
+.+ +|...|++|||...++ +|+..+-. |. -.|.+.- ...|. -+.+|-||.+|.
T Consensus 286 ~A~-~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~ 347 (373)
T 2blf_A 286 IAF-DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNARGE 347 (373)
T ss_dssp EEE-CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEETTSC
T ss_pred EEE-cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEcCCCC
Confidence 344 4557999999998875 89966543 11 1455542 23332 466778888874
No 26
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=25.56 E-value=86 Score=29.69 Aligned_cols=54 Identities=19% Similarity=0.361 Sum_probs=32.0
Q ss_pred EEeecCCcceeEEEEEecCc-ceeEcccC---------CC-ceEEeCC-CCCC-c-ceEEEEEecCCc
Q 025025 181 VTNVAGAGDIVRVSVKGANT-QWLSMSRN---------WG-QNWQSNA-QLVG-Q-ALSFRVTGSDRR 234 (259)
Q Consensus 181 v~n~~g~~~I~sVei~~~g~-~w~~m~r~---------~g-n~W~~~~-~~~g-~-p~~vRvTs~~G~ 234 (259)
+...+|..+|++|||...++ +|+...-. |- -.|.+.- ...+ . -+.+|-||.+|.
T Consensus 370 ~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~ 437 (466)
T 1sox_A 370 YAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 437 (466)
T ss_dssp EEECSTTCCEEEEEEESBTTSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred EEEcCCCCCEEEEEEEcCCCCcceEeecCCcccccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCC
Confidence 33444434699999998765 89977643 11 1366431 1122 1 466778888884
Done!