Query 025025
Match_columns 259
No_of_seqs 138 out of 995
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 18:41:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025025.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025025hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n10a2 b.52.1.3 (A:1003-1145) 100.0 3.5E-36 2.6E-40 247.2 13.5 126 24-165 9-143 (143)
2 d1wc2a1 b.52.1.1 (A:1-180) End 100.0 1.7E-35 1.2E-39 250.1 4.6 136 31-177 12-174 (180)
3 d1n10a1 b.7.3.1 (A:1146-1240) 99.9 9.9E-28 7.2E-32 183.9 12.2 89 165-254 2-95 (95)
4 d1whoa_ b.7.3.1 (A:) PHL P 2 { 99.9 2.8E-25 2.1E-29 169.7 11.7 87 165-254 3-94 (94)
5 d1bw3a_ b.52.1.2 (A:) Barwin { 98.6 2E-08 1.5E-12 76.9 4.6 60 79-161 60-124 (125)
6 d2enga_ b.52.1.1 (A:) Endogluc 94.6 0.0094 6.9E-07 49.2 3.2 53 68-137 72-124 (210)
7 d2a9da1 b.1.18.6 (A:344-466) S 64.1 5.1 0.00037 29.4 5.2 50 185-234 31-94 (123)
8 d1ogpa1 b.1.18.6 (A:263-389) S 62.9 5.2 0.00038 29.5 5.0 24 184-207 30-54 (127)
9 d1m7xa1 b.1.18.2 (A:117-226) 1 43.4 20 0.0015 25.0 5.4 36 203-238 48-86 (110)
10 d1sr3a_ b.40.9.1 (A:) Heme cha 30.9 20 0.0015 25.7 3.6 29 223-251 50-79 (114)
11 d1j6qa_ b.40.9.1 (A:) Heme cha 21.9 43 0.0031 23.3 3.9 29 223-251 48-78 (100)
No 1
>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}
Probab=100.00 E-value=3.5e-36 Score=247.15 Aligned_cols=126 Identities=32% Similarity=0.654 Sum_probs=104.6
Q ss_pred cCCccCCCCeeEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCCCCCC
Q 025025 24 IPGVFAGGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGN 101 (259)
Q Consensus 24 ~~~~~~~~~~~~g~aT~Yg~~~~~g~--~~GaCGyg~~~~~~~~~~~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~ 101 (259)
++..|. ++|++|+||||+++++.++ .+|||||++++..|++.++||+|+.+|++|..||+||||+|.+ +..|.++
T Consensus 9 ~~a~~~-~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~-~~~c~~~- 85 (143)
T d1n10a2 9 ITATYG-DKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-PEACSGE- 85 (143)
T ss_dssp CCCBCC-CSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-STTBCSC-
T ss_pred cccccC-CCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCC-CCcccCC-
Confidence 344464 8999999999998877654 4799999998888889999999999999999999999999987 4578755
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEechHHHHhhccc-------cCCeEEEEEEEeecccCCc
Q 025025 102 PAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY-------RAGIVPVSYRRVPCRKRGG 165 (259)
Q Consensus 102 ~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~~AF~~ia~~-------~~G~v~i~~r~V~C~~~gn 165 (259)
+|+|+|||.||+ |+ +..|||||+.||.+||++ +.|+|+|+||||+|+++|+
T Consensus 86 -sv~V~vtd~c~~-----------~~-~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~gg 143 (143)
T d1n10a2 86 -PVVVHITDDNEE-----------PI-APYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEG 143 (143)
T ss_dssp -CEEEEEEEECSS-----------CS-SSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTT
T ss_pred -CEEEEEEecccC-----------CC-CCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCCC
Confidence 899999999997 33 468999999999999985 6799999999999999873
No 2
>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}
Probab=100.00 E-value=1.7e-35 Score=250.06 Aligned_cols=136 Identities=24% Similarity=0.380 Sum_probs=113.5
Q ss_pred CCeeEEEEEEeCCCCCCCCCccccCCCcCCCC-C----CCCeEEEechhccCC------CCCCCceEEEEEcCCCC----
Q 025025 31 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-G----YGVNTAALSTALFNN------GLSCGACFELKCGGDPQ---- 95 (259)
Q Consensus 31 ~~~~~g~aT~Yg~~~~~g~~~GaCGyg~~~~~-~----~~~~~aA~s~~~y~~------g~~CG~C~eV~c~~~p~---- 95 (259)
.+|+.+++|||+.++ +|||||+++... + ++.++||+|+++|++ |+.||+||||||++++.
T Consensus 12 ~g~~~A~aT~Ygd~~-----~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~ 86 (180)
T d1wc2a1 12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (180)
T ss_dssp TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceEEeCCCC-----CCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence 589999999999764 699999997542 2 357899999999999 89999999999986432
Q ss_pred -CCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCC-----------CCceEechHHHHhhccccCCeEEEEEEEeecccC
Q 025025 96 -WCNPGNPAILITATNFCPPNFAQPSDNGGWCNPP-----------RPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKR 163 (259)
Q Consensus 96 -~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~-----------~~~fDLS~~AF~~ia~~~~G~v~i~~r~V~C~~~ 163 (259)
.|.. +++|+|||||.||.++ +|++||+++ +.||||+ .+|.+||....|+|+|+||+|+|+..
T Consensus 87 ~~~~~-g~sV~V~iTd~CP~n~----~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV~C~~~ 160 (180)
T d1wc2a1 87 GPVRE-GLSKTFMITNLCPNIY----PNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVVNCDSE 160 (180)
T ss_dssp CCCCT-TCEEEEEEEEEECSST----TSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEECHHHH
T ss_pred CCCCC-CCcEEEEEEecCCCCC----CCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEeeCCCc
Confidence 2222 3699999999999753 468899754 3499997 59999999999999999999999999
Q ss_pred CceEEEEcCcCcEE
Q 025025 164 GGIRFTINGFRYFN 177 (259)
Q Consensus 164 gni~~~v~ss~yw~ 177 (259)
+++++++.++++|-
T Consensus 161 g~~~~~~~~n~~~~ 174 (180)
T d1wc2a1 161 HNHDHRTPSNSMYG 174 (180)
T ss_dssp HHHCTTSCCHHHHT
T ss_pred ccccccccCCcchh
Confidence 99998888777763
No 3
>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}
Probab=99.95 E-value=9.9e-28 Score=183.85 Aligned_cols=89 Identities=24% Similarity=0.599 Sum_probs=82.8
Q ss_pred ceEEEEc--CcCcEEEEEEEeecCCcceeEEEEEecC-cceeEcccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEc
Q 025025 165 GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQNWQSNAQ--LVGQALSFRVTGSDRRTSTSW 239 (259)
Q Consensus 165 ni~~~v~--ss~yw~~v~v~n~~g~~~I~sVei~~~g-~~w~~m~r~~gn~W~~~~~--~~g~p~~vRvTs~~G~~v~a~ 239 (259)
+|+|+|+ ||+||++|+|.|++|+++|.+|||++++ ++|++|+|+|||+|+++.+ +++ ||+||||+.+|+++++.
T Consensus 2 ~i~F~v~~gsnp~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~g-pls~Rvt~~~G~~~v~~ 80 (95)
T d1n10a1 2 KVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAE 80 (95)
T ss_dssp CCEEEECTTCBTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEE
T ss_pred cEEEEECCCCCcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCc-CEEEEEEEcCCCEEEEC
Confidence 6899999 7999999999999999999999999986 6899999999999998653 455 99999999999999999
Q ss_pred cccCCCCCCCcEEec
Q 025025 240 NVAPANWQFGQTFSG 254 (259)
Q Consensus 240 ~viP~~w~~G~~y~~ 254 (259)
||||++|++|++|++
T Consensus 81 nViP~~W~~G~tY~s 95 (95)
T d1n10a1 81 DVIPEGWKADTSYES 95 (95)
T ss_dssp EEECSSCCSSEEEEC
T ss_pred ceECCCCCCCCEEeC
Confidence 999999999999985
No 4
>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}
Probab=99.92 E-value=2.8e-25 Score=169.72 Aligned_cols=87 Identities=21% Similarity=0.428 Sum_probs=79.2
Q ss_pred ceEEEEc--CcCcEEEEEEEeecCCcceeEEEEEecC-cceeEcccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025025 165 GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQNWQSNA--QLVGQALSFRVTGSDRRTSTSW 239 (259)
Q Consensus 165 ni~~~v~--ss~yw~~v~v~n~~g~~~I~sVei~~~g-~~w~~m~r~~gn~W~~~~--~~~g~p~~vRvTs~~G~~v~a~ 239 (259)
.|+|+|+ ||+|||+|+|.|++| +|.+|||++.+ ++|++|+|+|||+|+++. ++.+ ||+||||+.+|+++++.
T Consensus 3 ~v~f~v~~GSnp~~lav~v~~~gg--~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~g-plsfRvt~~~G~~~v~~ 79 (94)
T d1whoa_ 3 KVTFTVEKGSNEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD 79 (94)
T ss_dssp SEEEEECTTCBTTEEEEEEEETTC--CEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCS-SEEEEEEETTSCEEEEE
T ss_pred cEEEEECCCCCccEEEEEEEEcCC--CEEEEEEEECCCCceeECccCcCccEEECCCCCCCc-cEEEEEEEcCCCEEEEc
Confidence 6999998 789999999999985 89999999876 589999999999998865 3555 99999999999999999
Q ss_pred cccCCCCCCCcEEec
Q 025025 240 NVAPANWQFGQTFSG 254 (259)
Q Consensus 240 ~viP~~w~~G~~y~~ 254 (259)
||||++|++|++|++
T Consensus 80 nViP~~W~~G~ty~~ 94 (94)
T d1whoa_ 80 DVVPEKYTIGATYAP 94 (94)
T ss_dssp EEECSSCCTTCEECC
T ss_pred ceECCCCCCCCEECc
Confidence 999999999999974
No 5
>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=98.57 E-value=2e-08 Score=76.88 Aligned_cols=60 Identities=27% Similarity=0.571 Sum_probs=50.4
Q ss_pred CCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEec-hHHHHhhcc----ccCCeEEE
Q 025025 79 GLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLA-MPMFLKLAQ----YRAGIVPV 153 (259)
Q Consensus 79 g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS-~~AF~~ia~----~~~G~v~i 153 (259)
-..||+|++||.+.. +++++++|+|+|.. +.|||. +..|++|-. ...|.+.|
T Consensus 60 q~sCGkclrvTN~at-------ga~~~~RiVDqCsn----------------gGlDLD~~~vFn~iDtdG~G~~~Ghl~V 116 (125)
T d1bw3a_ 60 QAACGKCLRVTNPAT-------GAQITARIVDQCAN----------------GGLDLDWDTVFTKIDTNGIGYQQGHLNV 116 (125)
T ss_dssp GGGTTCEEEEEETTT-------TEEEEEEEEECCSS----------------SSCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred cccccceEEeeeccc-------CcEEEEEEeecccC----------------CCCccccHhhhheecCCCcccccccEEE
Confidence 368999999999752 36999999998764 479999 779999953 46789999
Q ss_pred EEEEeecc
Q 025025 154 SYRRVPCR 161 (259)
Q Consensus 154 ~~r~V~C~ 161 (259)
.|++|.|.
T Consensus 117 ~y~fV~C~ 124 (125)
T d1bw3a_ 117 NYQFVDCR 124 (125)
T ss_dssp EEEEECCC
T ss_pred EEEEecCC
Confidence 99999995
No 6
>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}
Probab=94.56 E-value=0.0094 Score=49.21 Aligned_cols=53 Identities=30% Similarity=0.393 Sum_probs=35.2
Q ss_pred EEEechhccCCCCCCCceEEEEEcCCCCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceEech
Q 025025 68 TAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAM 137 (259)
Q Consensus 68 ~aA~s~~~y~~g~~CG~C~eV~c~~~p~~C~~g~~sv~V~VtD~CP~~~~~~~~~~~~C~~~~~~fDLS~ 137 (259)
+||.+-.-...+..|.+|||++-++.|. .+|+.+|+||+.=-+ . ..+||||.-
T Consensus 72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~~----~GKkMiVQ~tNTGgD----------l---g~n~FDl~i 124 (210)
T d2enga_ 72 FAATSIAGSNEAGWCCACYELTFTSGPV----AGKKMVVQSTSTGGD----------L---GSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGGG----TTCEEEEEEEEC------------------CCEEEEEC
T ss_pred eeeeeecCCCccccccccEEEEeecCCc----CCCEEEEEEeccCCc----------c---CCCeeeEec
Confidence 5666543333346799999999987543 347999999985222 1 468999975
No 7
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=64.12 E-value=5.1 Score=29.42 Aligned_cols=50 Identities=20% Similarity=0.413 Sum_probs=30.2
Q ss_pred cCCcceeEEEEEecCc-ceeEcccC---------CC-ceEEeCC-CCCCc--ceEEEEEecCCc
Q 025025 185 AGAGDIVRVSVKGANT-QWLSMSRN---------WG-QNWQSNA-QLVGQ--ALSFRVTGSDRR 234 (259)
Q Consensus 185 ~g~~~I~sVei~~~g~-~w~~m~r~---------~g-n~W~~~~-~~~g~--p~~vRvTs~~G~ 234 (259)
+|..+|++|||...++ +|++.... |. -.|++.- +..+. .+..|-||..|+
T Consensus 31 ggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~~~~~~i~~RA~D~~G~ 94 (123)
T d2a9da1 31 GGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 94 (123)
T ss_dssp STTCCEEEEEEESBSSSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCCCccEEeEecCccCCCCceeEEEEEEEEEEcCCCCeEEEEEEEEcCCCC
Confidence 3434799999998865 79887643 11 1365542 22222 366677788774
No 8
>d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=62.90 E-value=5.2 Score=29.47 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=17.6
Q ss_pred ecCCcceeEEEEEecCc-ceeEccc
Q 025025 184 VAGAGDIVRVSVKGANT-QWLSMSR 207 (259)
Q Consensus 184 ~~g~~~I~sVei~~~g~-~w~~m~r 207 (259)
.+|...|++|||...++ +|++...
T Consensus 30 sGgg~~I~rVEVS~DgG~tW~~A~l 54 (127)
T d1ogpa1 30 SGGGRGIERVDISLDGGKNWVEASR 54 (127)
T ss_dssp CSTTCCEEEEEEESSTTSSCEECEE
T ss_pred cCCCceEEEEEEEeCCCCccEEeec
Confidence 34434799999998864 7988753
No 9
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]}
Probab=43.42 E-value=20 Score=24.96 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=26.2
Q ss_pred eEcc-cCCCceEEe--CCCCCCcceEEEEEecCCcEEEE
Q 025025 203 LSMS-RNWGQNWQS--NAQLVGQALSFRVTGSDRRTSTS 238 (259)
Q Consensus 203 ~~m~-r~~gn~W~~--~~~~~g~p~~vRvTs~~G~~v~a 238 (259)
.+|. |..+.+|.. +....|..+.+||+..+|+++.-
T Consensus 48 ~~m~~~~~~G~W~~~i~~~~~G~~Y~y~v~~~~G~~~~~ 86 (110)
T d1m7xa1 48 HPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLK 86 (110)
T ss_dssp CBCCCCTTTTEEEEEEETCCTTCEEEEEEECTTSCEEEE
T ss_pred EEeEEecCCCcEEEEecCCCCCCEEEEEEEcCCCcEeEE
Confidence 3554 556668975 44556679999999999998763
No 10
>d1sr3a_ b.40.9.1 (A:) Heme chaperone CcmE {Escherichia coli [TaxId: 562]}
Probab=30.88 E-value=20 Score=25.71 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=21.9
Q ss_pred ceEEEEEecCCc-EEEEccccCCCCCCCcE
Q 025025 223 ALSFRVTGSDRR-TSTSWNVAPANWQFGQT 251 (259)
Q Consensus 223 p~~vRvTs~~G~-~v~a~~viP~~w~~G~~ 251 (259)
.++|+|||.... .|.+..++|..|+.|.-
T Consensus 50 ~~~F~itD~~~~i~V~Y~GilPdlF~eg~~ 79 (114)
T d1sr3a_ 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQG 79 (114)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTSE
T ss_pred eEEEEEccCCcEEEEEecCCCChhhcCCCe
Confidence 578999986664 55567899999988763
No 11
>d1j6qa_ b.40.9.1 (A:) Heme chaperone CcmE {Shewanella putrefaciens [TaxId: 24]}
Probab=21.90 E-value=43 Score=23.26 Aligned_cols=29 Identities=24% Similarity=0.193 Sum_probs=22.0
Q ss_pred ceEEEEEecCCc--EEEEccccCCCCCCCcE
Q 025025 223 ALSFRVTGSDRR--TSTSWNVAPANWQFGQT 251 (259)
Q Consensus 223 p~~vRvTs~~G~--~v~a~~viP~~w~~G~~ 251 (259)
.++|+|||..++ .|.+..++|.-|+.|+-
T Consensus 48 ~~~F~itD~~~~~i~V~Y~G~lPdlF~eg~g 78 (100)
T d1j6qa_ 48 HVQFAVHDSLGGEILVTYDDLLPDLFREGQG 78 (100)
T ss_dssp CEEEEEECTTCCCEEEEECSCCTTSCCSSSE
T ss_pred EEEEEEcCCceeEEEEEeCCCCCchhcCCCe
Confidence 478999986543 55567899999998763
Done!