Query 025026
Match_columns 259
No_of_seqs 125 out of 1458
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 09:22:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025026.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025026hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.7E-38 3.7E-43 265.9 21.8 242 2-243 51-294 (294)
2 PLN02679 hydrolase, alpha/beta 100.0 8.9E-34 1.9E-38 243.5 23.0 237 2-244 110-358 (360)
3 PRK03592 haloalkane dehalogena 100.0 5.4E-32 1.2E-36 226.7 17.6 230 2-246 49-292 (295)
4 PLN02578 hydrolase 100.0 6.6E-31 1.4E-35 225.4 22.6 231 2-241 108-353 (354)
5 TIGR02240 PHA_depoly_arom poly 100.0 3E-31 6.6E-36 220.1 16.7 220 2-245 47-268 (276)
6 KOG4178 Soluble epoxide hydrol 100.0 1.6E-31 3.4E-36 217.2 14.4 235 3-244 67-321 (322)
7 PLN02965 Probable pheophorbida 100.0 2.6E-31 5.6E-36 218.1 13.9 218 3-243 26-253 (255)
8 PRK10349 carboxylesterase BioH 100.0 1.8E-30 4E-35 213.0 18.9 215 2-242 35-255 (256)
9 PRK03204 haloalkane dehalogena 100.0 7E-30 1.5E-34 212.9 19.1 220 2-240 56-285 (286)
10 PRK10673 acyl-CoA esterase; Pr 100.0 5.2E-30 1.1E-34 209.9 15.8 213 2-243 38-255 (255)
11 PRK06489 hypothetical protein; 100.0 2.3E-29 4.9E-34 216.4 18.9 235 3-245 102-359 (360)
12 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.8E-29 6.1E-34 208.6 18.3 218 4-241 58-281 (282)
13 KOG1454 Predicted hydrolase/ac 100.0 3.3E-30 7.1E-35 216.8 12.5 233 2-244 80-325 (326)
14 PRK00870 haloalkane dehalogena 100.0 4.9E-29 1.1E-33 209.5 18.1 219 3-243 69-301 (302)
15 PRK07581 hypothetical protein; 100.0 6.7E-29 1.4E-33 211.9 17.4 229 2-243 66-336 (339)
16 PRK08775 homoserine O-acetyltr 100.0 1.3E-28 2.7E-33 210.5 18.5 228 3-244 95-340 (343)
17 PLN03087 BODYGUARD 1 domain co 100.0 2.8E-29 6E-34 219.8 14.3 226 5-243 231-479 (481)
18 PLN03084 alpha/beta hydrolase 100.0 4.2E-28 9E-33 208.3 20.8 224 2-242 149-383 (383)
19 TIGR03056 bchO_mg_che_rel puta 100.0 3.9E-28 8.6E-33 200.9 18.4 225 2-241 50-278 (278)
20 PRK11126 2-succinyl-6-hydroxy- 100.0 1.8E-27 3.9E-32 193.5 19.6 210 3-242 25-241 (242)
21 TIGR03611 RutD pyrimidine util 100.0 4.1E-27 8.9E-32 192.0 18.4 215 3-241 36-256 (257)
22 KOG4409 Predicted hydrolase/ac 100.0 4.2E-27 9E-32 192.1 17.7 230 2-243 112-364 (365)
23 TIGR01738 bioH putative pimelo 100.0 6.7E-27 1.4E-31 188.9 18.3 213 2-240 26-245 (245)
24 TIGR01392 homoserO_Ac_trn homo 99.9 5.8E-27 1.3E-31 200.8 17.1 230 3-241 69-351 (351)
25 TIGR02427 protocat_pcaD 3-oxoa 99.9 6.3E-27 1.4E-31 189.6 15.8 213 2-241 35-251 (251)
26 PRK00175 metX homoserine O-ace 99.9 1.9E-26 4.2E-31 199.3 16.6 235 4-245 89-376 (379)
27 PLN02385 hydrolase; alpha/beta 99.9 1.1E-26 2.4E-31 199.0 13.7 219 3-244 111-346 (349)
28 PF12697 Abhydrolase_6: Alpha/ 99.9 2.5E-26 5.4E-31 183.1 12.0 206 3-235 21-228 (228)
29 TIGR03695 menH_SHCHC 2-succiny 99.9 9.6E-25 2.1E-29 176.4 18.5 223 2-241 23-251 (251)
30 PLN02894 hydrolase, alpha/beta 99.9 1.1E-24 2.5E-29 189.3 19.1 240 3-246 128-388 (402)
31 TIGR01250 pro_imino_pep_2 prol 99.9 4.5E-25 9.9E-30 182.6 15.1 223 6-241 53-288 (288)
32 PF00561 Abhydrolase_1: alpha/ 99.9 6.7E-26 1.5E-30 182.1 7.6 217 7-237 1-229 (230)
33 PRK14875 acetoin dehydrogenase 99.9 3E-24 6.5E-29 185.3 18.1 210 3-242 154-370 (371)
34 PLN02298 hydrolase, alpha/beta 99.9 1.3E-24 2.8E-29 184.9 15.1 220 3-246 83-320 (330)
35 PLN02211 methyl indole-3-aceta 99.9 3.8E-24 8.2E-29 177.1 17.4 213 3-242 41-269 (273)
36 PRK10749 lysophospholipase L2; 99.9 8.1E-25 1.7E-29 186.0 13.1 228 4-243 79-329 (330)
37 PLN02980 2-oxoglutarate decarb 99.9 3.6E-24 7.9E-29 211.8 19.0 229 2-244 1393-1640(1655)
38 PHA02857 monoglyceride lipase; 99.9 4E-24 8.7E-29 177.3 16.5 209 3-243 48-273 (276)
39 PRK06765 homoserine O-acetyltr 99.9 1E-23 2.2E-28 181.6 19.3 229 5-242 98-387 (389)
40 KOG2984 Predicted hydrolase [G 99.9 7.6E-24 1.7E-28 159.9 11.2 203 7-243 72-276 (277)
41 TIGR01249 pro_imino_pep_1 prol 99.9 7.4E-23 1.6E-27 172.3 15.3 80 4-88 51-130 (306)
42 PLN02511 hydrolase 99.9 1E-22 2.2E-27 176.4 15.7 222 3-243 126-365 (388)
43 KOG2382 Predicted alpha/beta h 99.9 1.5E-22 3.2E-27 165.0 15.2 218 7-243 81-313 (315)
44 PRK05855 short chain dehydroge 99.9 2.6E-22 5.5E-27 182.9 16.2 232 2-245 47-294 (582)
45 PLN02652 hydrolase; alpha/beta 99.9 2.5E-21 5.5E-26 167.4 15.3 212 5-244 162-388 (395)
46 COG2267 PldB Lysophospholipase 99.8 1.9E-19 4.1E-24 150.2 18.5 224 4-245 59-296 (298)
47 PRK05077 frsA fermentation/res 99.8 1.1E-18 2.3E-23 152.2 18.7 190 4-243 220-412 (414)
48 TIGR01838 PHA_synth_I poly(R)- 99.8 1E-18 2.2E-23 154.9 18.5 223 4-231 218-463 (532)
49 TIGR03100 hydr1_PEP hydrolase, 99.8 1.1E-18 2.4E-23 144.6 17.0 73 5-87 56-133 (274)
50 TIGR01607 PST-A Plasmodium sub 99.8 1.5E-18 3.3E-23 147.5 16.8 218 4-241 72-331 (332)
51 COG0596 MhpC Predicted hydrola 99.8 4.6E-18 1E-22 137.5 15.7 74 7-89 51-124 (282)
52 PRK10985 putative hydrolase; P 99.8 3.1E-17 6.8E-22 139.2 17.6 213 4-243 85-320 (324)
53 KOG2564 Predicted acetyltransf 99.7 1.7E-17 3.6E-22 131.7 10.6 218 6-252 102-336 (343)
54 TIGR01836 PHA_synth_III_C poly 99.7 2.2E-16 4.7E-21 135.4 16.2 75 4-88 92-171 (350)
55 PLN02872 triacylglycerol lipas 99.7 4.9E-16 1.1E-20 134.2 18.0 234 3-243 103-389 (395)
56 COG1647 Esterase/lipase [Gener 99.7 3.3E-16 7.2E-21 120.6 13.5 196 5-242 41-243 (243)
57 PRK11071 esterase YqiA; Provis 99.7 6.1E-16 1.3E-20 121.1 14.3 159 5-241 31-189 (190)
58 KOG1455 Lysophospholipase [Lip 99.7 2.4E-16 5.2E-21 127.1 11.8 215 5-243 81-312 (313)
59 PRK07868 acyl-CoA synthetase; 99.7 1.9E-15 4.2E-20 145.3 16.4 232 5-244 98-362 (994)
60 KOG2931 Differentiation-relate 99.7 4.3E-14 9.3E-19 113.2 20.0 221 3-244 75-307 (326)
61 PF03096 Ndr: Ndr family; Int 99.6 3.7E-15 8E-20 120.7 12.6 220 3-243 52-279 (283)
62 PRK13604 luxD acyl transferase 99.6 2.4E-14 5.2E-19 118.2 13.5 74 5-87 63-140 (307)
63 PRK10566 esterase; Provisional 99.6 8.3E-14 1.8E-18 113.7 15.3 57 183-243 186-248 (249)
64 TIGR03101 hydr2_PEP hydrolase, 99.5 2.9E-14 6.3E-19 116.7 9.4 76 5-87 55-133 (266)
65 COG2021 MET2 Homoserine acetyl 99.5 6.9E-13 1.5E-17 110.3 16.3 228 5-242 91-367 (368)
66 COG3208 GrsT Predicted thioest 99.5 9.8E-13 2.1E-17 103.6 14.9 200 2-243 29-236 (244)
67 KOG1552 Predicted alpha/beta h 99.4 8.2E-13 1.8E-17 104.7 10.1 165 6-246 88-255 (258)
68 TIGR03230 lipo_lipase lipoprot 99.4 7.9E-13 1.7E-17 114.7 9.3 79 5-90 72-156 (442)
69 PF00326 Peptidase_S9: Prolyl 99.4 4E-12 8.7E-17 101.4 11.6 187 4-244 12-210 (213)
70 PF12695 Abhydrolase_5: Alpha/ 99.4 1.7E-12 3.8E-17 96.8 7.7 120 5-223 25-145 (145)
71 TIGR01839 PHA_synth_II poly(R) 99.4 1.3E-10 2.9E-15 102.8 19.2 211 3-226 244-484 (560)
72 KOG4667 Predicted esterase [Li 99.3 1.4E-11 3.1E-16 94.7 10.9 189 5-240 61-255 (269)
73 PF06342 DUF1057: Alpha/beta h 99.3 4.8E-11 1E-15 96.0 13.7 76 5-88 61-137 (297)
74 TIGR02821 fghA_ester_D S-formy 99.3 3E-10 6.6E-15 94.2 16.9 82 6-87 72-172 (275)
75 PLN02442 S-formylglutathione h 99.2 3.3E-10 7.1E-15 94.3 14.3 52 36-87 126-177 (283)
76 TIGR01849 PHB_depoly_PhaZ poly 99.2 1.9E-10 4.2E-15 98.9 12.4 78 3-89 127-209 (406)
77 cd00707 Pancreat_lipase_like P 99.2 4.1E-11 8.9E-16 99.2 5.6 79 5-90 65-149 (275)
78 COG0429 Predicted hydrolase of 99.1 7.6E-09 1.6E-13 85.2 16.9 59 184-242 275-339 (345)
79 KOG4391 Predicted alpha/beta h 99.1 1.4E-10 3.1E-15 89.3 6.4 171 6-245 106-284 (300)
80 PRK11460 putative hydrolase; P 99.1 1.5E-09 3.3E-14 87.7 12.6 55 183-237 148-206 (232)
81 PF00975 Thioesterase: Thioest 99.1 3.7E-09 8E-14 85.1 14.2 78 3-89 23-105 (229)
82 PF10230 DUF2305: Uncharacteri 99.1 4.7E-09 1E-13 86.5 14.8 85 3-88 29-122 (266)
83 PTZ00472 serine carboxypeptida 99.1 1.6E-08 3.5E-13 89.5 17.8 80 4-88 119-216 (462)
84 PF02230 Abhydrolase_2: Phosph 99.0 2.8E-09 6.1E-14 85.2 11.5 124 36-243 83-215 (216)
85 PLN00021 chlorophyllase 99.0 7.3E-09 1.6E-13 87.2 13.4 74 3-86 75-164 (313)
86 PRK10252 entF enterobactin syn 99.0 2.6E-08 5.6E-13 99.2 18.8 77 2-87 1090-1170(1296)
87 PF06500 DUF1100: Alpha/beta h 99.0 2E-08 4.3E-13 86.0 13.8 185 4-242 216-408 (411)
88 TIGR00976 /NonD putative hydro 98.9 1.7E-09 3.6E-14 98.3 6.1 77 4-88 51-132 (550)
89 COG1506 DAP2 Dipeptidyl aminop 98.9 1.4E-08 3E-13 93.5 12.0 186 4-244 421-617 (620)
90 PLN02733 phosphatidylcholine-s 98.9 2.4E-09 5.2E-14 93.6 5.6 81 3-88 117-201 (440)
91 KOG1838 Alpha/beta hydrolase [ 98.8 5.4E-07 1.2E-11 76.9 18.1 77 3-86 151-233 (409)
92 PF06821 Ser_hydrolase: Serine 98.8 1.9E-08 4.1E-13 77.2 8.2 125 35-233 38-163 (171)
93 COG0400 Predicted esterase [Ge 98.8 4.2E-08 9.1E-13 77.2 10.3 119 37-243 81-205 (207)
94 COG2945 Predicted hydrolase of 98.8 1E-07 2.2E-12 72.6 11.2 144 5-241 59-205 (210)
95 COG3243 PhaC Poly(3-hydroxyalk 98.7 2.3E-07 4.9E-12 78.8 12.9 221 3-228 136-375 (445)
96 PRK05371 x-prolyl-dipeptidyl a 98.7 7.5E-07 1.6E-11 83.5 17.1 77 3-87 276-372 (767)
97 TIGR03502 lipase_Pla1_cef extr 98.7 5.3E-08 1.2E-12 90.0 8.8 72 3-74 472-576 (792)
98 PRK10162 acetyl esterase; Prov 98.7 4.1E-07 8.9E-12 77.1 12.9 75 6-87 112-194 (318)
99 TIGR01840 esterase_phb esteras 98.7 1.3E-07 2.9E-12 75.3 8.6 81 5-87 42-129 (212)
100 COG4757 Predicted alpha/beta h 98.6 1.4E-07 3E-12 73.8 7.2 76 5-86 56-136 (281)
101 PF05448 AXE1: Acetyl xylan es 98.6 2.5E-06 5.4E-11 72.1 15.0 190 5-243 108-320 (320)
102 smart00824 PKS_TE Thioesterase 98.5 8.2E-07 1.8E-11 69.9 9.9 77 2-87 21-101 (212)
103 PF05728 UPF0227: Uncharacteri 98.5 3.7E-06 8E-11 65.4 12.9 52 34-88 40-91 (187)
104 COG3319 Thioesterase domains o 98.5 9.1E-07 2E-11 71.9 8.6 79 2-89 22-104 (257)
105 KOG2565 Predicted hydrolases o 98.4 4.8E-07 1E-11 75.5 6.2 71 7-83 189-259 (469)
106 PF09752 DUF2048: Uncharacteri 98.4 6.4E-06 1.4E-10 69.1 12.9 57 184-241 290-347 (348)
107 PF06028 DUF915: Alpha/beta hy 98.4 4.4E-06 9.6E-11 68.1 11.0 55 35-89 81-144 (255)
108 PF08538 DUF1749: Protein of u 98.4 2.3E-06 5E-11 70.6 9.3 53 35-87 82-147 (303)
109 PF01738 DLH: Dienelactone hyd 98.4 2.9E-06 6.4E-11 67.8 9.8 141 5-230 40-196 (218)
110 COG3545 Predicted esterase of 98.4 4.2E-06 9.1E-11 63.0 9.4 133 35-242 42-178 (181)
111 PF07819 PGAP1: PGAP1-like pro 98.3 2.8E-06 6.1E-11 68.2 8.4 75 5-89 38-124 (225)
112 PF00450 Peptidase_S10: Serine 98.3 2.7E-05 5.8E-10 68.4 15.1 80 5-88 84-181 (415)
113 PF08840 BAAT_C: BAAT / Acyl-C 98.2 8.9E-07 1.9E-11 70.6 2.7 50 39-89 5-57 (213)
114 KOG1553 Predicted alpha/beta h 98.2 4.9E-06 1.1E-10 68.9 6.7 74 3-84 265-341 (517)
115 PF08386 Abhydrolase_4: TAP-li 98.2 5.3E-06 1.2E-10 58.1 5.9 66 184-249 35-100 (103)
116 KOG3975 Uncharacterized conser 98.1 7.4E-05 1.6E-09 59.4 11.3 228 4-240 57-300 (301)
117 COG0412 Dienelactone hydrolase 98.0 0.00032 6.9E-09 56.8 14.0 79 5-84 53-142 (236)
118 PF07859 Abhydrolase_3: alpha/ 98.0 2.8E-05 6E-10 61.6 7.8 69 5-87 28-109 (211)
119 PF12146 Hydrolase_4: Putative 98.0 1.2E-05 2.5E-10 53.4 4.6 38 5-48 42-79 (79)
120 PRK10115 protease 2; Provision 97.9 0.00094 2E-08 62.5 16.3 81 3-86 471-557 (686)
121 COG3458 Acetyl esterase (deace 97.8 0.00029 6.3E-09 56.9 10.8 79 5-84 108-206 (321)
122 PF03583 LIP: Secretory lipase 97.8 0.0022 4.8E-08 53.6 15.7 44 182-225 218-266 (290)
123 PF02273 Acyl_transf_2: Acyl t 97.7 0.005 1.1E-07 49.2 15.2 73 4-85 55-131 (294)
124 COG3571 Predicted hydrolase of 97.7 0.00047 1E-08 51.3 8.6 52 35-86 71-122 (213)
125 PF05677 DUF818: Chlamydia CHL 97.6 0.0002 4.3E-09 59.8 7.2 59 6-74 171-236 (365)
126 KOG4627 Kynurenine formamidase 97.6 0.0003 6.6E-09 54.5 7.3 58 183-240 207-268 (270)
127 PF02129 Peptidase_S15: X-Pro 97.6 0.00016 3.5E-09 59.9 6.2 76 4-87 55-135 (272)
128 cd00741 Lipase Lipase. Lipase 97.5 0.00025 5.5E-09 53.3 5.9 52 36-87 7-66 (153)
129 PF11339 DUF3141: Protein of u 97.4 0.0043 9.3E-08 54.8 13.1 54 34-87 116-174 (581)
130 KOG1551 Uncharacterized conser 97.4 0.0019 4.1E-08 52.1 9.7 58 186-244 309-367 (371)
131 PF05577 Peptidase_S28: Serine 97.4 0.00066 1.4E-08 60.1 8.0 82 7-88 60-148 (434)
132 PF03959 FSH1: Serine hydrolas 97.3 0.00056 1.2E-08 54.5 5.7 46 183-229 161-207 (212)
133 COG0657 Aes Esterase/lipase [L 97.3 0.012 2.5E-07 49.8 13.7 73 5-87 109-190 (312)
134 PF01764 Lipase_3: Lipase (cla 97.3 0.00057 1.2E-08 50.4 5.0 38 38-75 49-86 (140)
135 PRK10439 enterobactin/ferric e 97.2 0.0008 1.7E-08 59.0 6.6 52 36-87 266-322 (411)
136 PF10142 PhoPQ_related: PhoPQ- 97.2 0.0068 1.5E-07 52.0 12.0 57 183-242 262-319 (367)
137 PF02450 LCAT: Lecithin:choles 97.2 0.00075 1.6E-08 58.8 5.9 52 37-88 100-160 (389)
138 PF12715 Abhydrolase_7: Abhydr 97.2 0.00084 1.8E-08 57.2 5.9 78 5-85 159-257 (390)
139 PF00151 Lipase: Lipase; Inte 97.2 0.0012 2.5E-08 56.3 6.6 80 5-91 103-190 (331)
140 COG1075 LipA Predicted acetylt 97.1 0.0012 2.6E-08 56.4 6.6 56 35-90 109-166 (336)
141 KOG2624 Triglyceride lipase-ch 97.1 0.032 6.8E-07 48.6 15.2 85 5-89 105-200 (403)
142 PF00756 Esterase: Putative es 97.1 0.00062 1.3E-08 55.4 4.4 51 37-87 96-149 (251)
143 PF10503 Esterase_phd: Esteras 97.0 0.0013 2.9E-08 52.4 5.6 50 39-88 81-132 (220)
144 PF12740 Chlorophyllase2: Chlo 97.0 0.0013 2.8E-08 53.5 5.4 36 52-87 90-130 (259)
145 PF06057 VirJ: Bacterial virul 96.9 0.0023 5E-08 49.4 5.6 71 5-87 28-106 (192)
146 PF11187 DUF2974: Protein of u 96.9 0.0025 5.3E-08 51.1 5.8 35 53-87 84-122 (224)
147 PF05057 DUF676: Putative seri 96.9 0.0017 3.8E-08 51.9 4.8 35 38-72 61-97 (217)
148 PF04301 DUF452: Protein of un 96.8 0.046 1E-06 43.3 12.2 39 51-91 55-93 (213)
149 KOG1515 Arylacetamide deacetyl 96.8 0.022 4.8E-07 48.4 11.0 60 184-243 269-335 (336)
150 COG2819 Predicted hydrolase of 96.7 0.0032 6.8E-08 51.1 5.2 53 36-88 117-172 (264)
151 PF01674 Lipase_2: Lipase (cla 96.7 0.0064 1.4E-07 48.5 6.7 71 5-84 28-105 (219)
152 PLN02162 triacylglycerol lipas 96.6 0.0047 1E-07 54.1 5.9 37 36-72 261-297 (475)
153 PRK04940 hypothetical protein; 96.6 0.0078 1.7E-07 46.3 6.5 46 40-88 43-92 (180)
154 PF05990 DUF900: Alpha/beta hy 96.6 0.0029 6.2E-08 51.2 4.3 74 7-86 49-135 (233)
155 cd00519 Lipase_3 Lipase (class 96.6 0.0035 7.7E-08 50.4 4.7 24 52-75 127-150 (229)
156 COG4814 Uncharacterized protei 96.4 0.008 1.7E-07 48.3 5.3 53 35-87 114-175 (288)
157 PLN00413 triacylglycerol lipas 96.3 0.009 2E-07 52.5 6.0 35 38-72 269-303 (479)
158 KOG2100 Dipeptidyl aminopeptid 96.3 0.055 1.2E-06 51.3 11.5 82 5-86 557-642 (755)
159 PF05705 DUF829: Eukaryotic pr 96.3 0.13 2.8E-06 41.6 12.3 58 183-240 178-240 (240)
160 PF06259 Abhydrolase_8: Alpha/ 96.2 0.017 3.7E-07 44.5 6.4 52 36-87 87-143 (177)
161 KOG2281 Dipeptidyl aminopeptid 96.2 0.0095 2E-07 53.8 5.6 78 4-81 674-755 (867)
162 PF07224 Chlorophyllase: Chlor 96.1 0.012 2.6E-07 47.6 5.2 77 4-87 71-156 (307)
163 PLN02571 triacylglycerol lipas 96.1 0.0085 1.8E-07 52.0 4.7 36 38-73 209-246 (413)
164 KOG3724 Negative regulator of 96.1 0.0082 1.8E-07 55.4 4.5 33 55-87 184-219 (973)
165 PLN02454 triacylglycerol lipas 96.1 0.01 2.2E-07 51.5 5.0 35 39-73 208-248 (414)
166 KOG3253 Predicted alpha/beta h 96.0 0.036 7.8E-07 49.9 8.1 44 183-226 304-348 (784)
167 KOG2183 Prolylcarboxypeptidase 96.0 0.015 3.2E-07 50.0 5.4 80 7-86 112-200 (492)
168 PF03403 PAF-AH_p_II: Platelet 95.8 0.0032 6.8E-08 54.7 0.9 34 53-87 228-261 (379)
169 COG3509 LpqC Poly(3-hydroxybut 95.8 0.064 1.4E-06 44.3 8.2 54 35-88 124-179 (312)
170 PLN02408 phospholipase A1 95.8 0.016 3.5E-07 49.6 4.8 35 40-74 185-221 (365)
171 PF05277 DUF726: Protein of un 95.7 0.03 6.4E-07 47.7 6.0 47 41-87 206-259 (345)
172 KOG4840 Predicted hydrolases o 95.6 0.14 3E-06 40.6 8.8 54 33-86 83-142 (299)
173 COG0627 Predicted esterase [Ge 95.5 0.021 4.6E-07 48.1 4.7 54 34-87 127-186 (316)
174 COG2936 Predicted acyl esteras 95.5 0.031 6.6E-07 50.4 5.7 79 4-89 78-160 (563)
175 KOG2369 Lecithin:cholesterol a 95.4 0.029 6.3E-07 49.1 5.1 49 38-86 163-223 (473)
176 PLN02517 phosphatidylcholine-s 95.4 0.028 6E-07 50.9 5.1 50 38-87 194-262 (642)
177 KOG2551 Phospholipase/carboxyh 95.4 0.033 7.2E-07 43.9 5.0 57 183-242 163-219 (230)
178 PLN02934 triacylglycerol lipas 95.4 0.026 5.6E-07 50.1 4.8 35 38-72 306-340 (515)
179 PLN02324 triacylglycerol lipas 95.3 0.027 5.9E-07 48.9 4.7 33 41-73 201-235 (415)
180 COG4099 Predicted peptidase [G 95.2 0.043 9.3E-07 45.3 5.1 43 45-87 259-303 (387)
181 COG1073 Hydrolases of the alph 95.1 0.047 1E-06 45.0 5.5 60 184-243 233-297 (299)
182 COG3150 Predicted esterase [Ge 95.1 0.058 1.3E-06 40.7 5.2 67 12-89 26-92 (191)
183 PLN02802 triacylglycerol lipas 95.1 0.035 7.5E-07 49.3 4.6 35 40-74 315-351 (509)
184 PLN02310 triacylglycerol lipas 95.0 0.037 7.9E-07 48.0 4.6 35 39-73 191-229 (405)
185 PLN02753 triacylglycerol lipas 94.9 0.04 8.6E-07 49.1 4.5 33 41-73 295-332 (531)
186 PLN02213 sinapoylglucose-malat 94.8 0.051 1.1E-06 46.1 5.0 58 184-242 234-316 (319)
187 PLN02213 sinapoylglucose-malat 94.8 0.15 3.2E-06 43.3 7.7 75 7-87 2-95 (319)
188 PF01083 Cutinase: Cutinase; 94.7 0.065 1.4E-06 41.4 4.9 50 40-89 64-123 (179)
189 PLN02719 triacylglycerol lipas 94.6 0.054 1.2E-06 48.2 4.5 20 54-73 299-318 (518)
190 cd00312 Esterase_lipase Estera 94.4 0.066 1.4E-06 48.2 5.0 77 7-88 126-213 (493)
191 COG4782 Uncharacterized protei 94.4 0.062 1.4E-06 45.6 4.4 63 7-72 147-210 (377)
192 PLN03037 lipase class 3 family 94.2 0.07 1.5E-06 47.6 4.5 34 40-73 301-338 (525)
193 PLN02209 serine carboxypeptida 94.1 0.1 2.3E-06 46.2 5.5 59 183-242 351-434 (437)
194 PLN02761 lipase class 3 family 94.1 0.079 1.7E-06 47.3 4.5 20 54-73 295-314 (527)
195 KOG2182 Hydrolytic enzymes of 94.0 0.16 3.5E-06 44.8 6.3 82 7-88 119-207 (514)
196 PLN03016 sinapoylglucose-malat 93.9 0.12 2.7E-06 45.7 5.5 59 183-242 347-430 (433)
197 KOG3101 Esterase D [General fu 93.9 0.01 2.2E-07 46.4 -1.1 53 33-85 116-173 (283)
198 PLN02847 triacylglycerol lipas 93.8 0.1 2.2E-06 47.3 4.8 22 52-73 250-271 (633)
199 COG4188 Predicted dienelactone 93.4 0.18 3.9E-06 43.1 5.3 49 184-232 252-303 (365)
200 PF12048 DUF3530: Protein of u 93.2 0.29 6.2E-06 41.4 6.4 41 46-86 186-227 (310)
201 COG2382 Fes Enterochelin ester 93.2 0.071 1.5E-06 44.1 2.6 34 54-87 178-211 (299)
202 KOG4569 Predicted lipase [Lipi 92.8 0.17 3.7E-06 43.3 4.4 37 37-73 155-191 (336)
203 PLN03016 sinapoylglucose-malat 92.7 0.4 8.6E-06 42.5 6.8 78 5-87 114-209 (433)
204 KOG1282 Serine carboxypeptidas 92.7 0.21 4.6E-06 44.2 5.0 61 184-244 364-449 (454)
205 PLN02209 serine carboxypeptida 92.2 0.5 1.1E-05 42.0 6.7 78 5-87 116-211 (437)
206 PLN02633 palmitoyl protein thi 92.1 0.5 1.1E-05 39.6 6.2 56 35-90 74-133 (314)
207 PF11288 DUF3089: Protein of u 92.1 0.36 7.8E-06 38.1 5.2 39 36-74 77-116 (207)
208 KOG3847 Phospholipase A2 (plat 91.5 0.091 2E-06 43.7 1.3 46 43-89 231-276 (399)
209 COG4287 PqaA PhoPQ-activated p 91.2 3.3 7.2E-05 35.6 10.0 57 184-243 330-387 (507)
210 PLN02606 palmitoyl-protein thi 91.1 0.71 1.5E-05 38.6 6.1 56 35-90 75-134 (306)
211 PF11144 DUF2920: Protein of u 90.2 0.5 1.1E-05 41.0 4.6 34 54-87 185-218 (403)
212 KOG3043 Predicted hydrolase re 89.9 0.57 1.2E-05 37.2 4.3 43 183-225 164-211 (242)
213 KOG2029 Uncharacterized conser 89.8 0.86 1.9E-05 41.4 5.8 57 35-91 505-575 (697)
214 KOG1202 Animal-type fatty acid 89.4 0.97 2.1E-05 44.5 6.2 55 35-89 2163-2220(2376)
215 KOG3967 Uncharacterized conser 89.2 0.55 1.2E-05 37.1 3.7 41 47-87 184-226 (297)
216 PF02089 Palm_thioest: Palmito 88.6 2 4.2E-05 35.6 6.7 55 36-90 61-118 (279)
217 COG5153 CVT17 Putative lipase 86.5 1.1 2.4E-05 37.0 4.1 26 50-75 273-298 (425)
218 KOG4540 Putative lipase essent 86.5 1.1 2.4E-05 37.0 4.1 26 50-75 273-298 (425)
219 COG2939 Carboxypeptidase C (ca 85.8 3 6.6E-05 37.2 6.7 75 6-85 146-233 (498)
220 KOG2112 Lysophospholipase [Lip 85.4 1.9 4.2E-05 33.8 4.8 51 35-85 70-125 (206)
221 PF10340 DUF2424: Protein of u 85.4 4.3 9.4E-05 35.1 7.4 56 35-90 177-237 (374)
222 KOG4372 Predicted alpha/beta h 84.4 0.41 8.9E-06 41.3 0.8 33 38-70 135-167 (405)
223 COG1770 PtrB Protease II [Amin 84.3 1.9 4.1E-05 39.8 4.9 50 34-83 506-557 (682)
224 PF00135 COesterase: Carboxyle 84.1 1.3 2.7E-05 40.2 3.9 56 33-88 183-245 (535)
225 PF07082 DUF1350: Protein of u 83.3 3.7 8.1E-05 33.3 5.7 33 54-86 91-123 (250)
226 COG2272 PnbA Carboxylesterase 82.7 3.6 7.9E-05 36.7 5.9 47 41-88 166-217 (491)
227 COG4947 Uncharacterized protei 81.2 0.98 2.1E-05 34.4 1.6 35 53-87 101-135 (227)
228 KOG2112 Lysophospholipase [Lip 79.8 3 6.5E-05 32.8 4.0 56 183-242 144-203 (206)
229 COG3946 VirJ Type IV secretory 79.4 5.3 0.00011 34.8 5.6 41 35-75 304-348 (456)
230 KOG2385 Uncharacterized conser 79.0 2.5 5.4E-05 37.8 3.6 48 41-88 433-487 (633)
231 PF05576 Peptidase_S37: PS-10 77.6 1.6 3.4E-05 38.1 2.0 74 7-84 89-165 (448)
232 smart00827 PKS_AT Acyl transfe 76.7 3 6.4E-05 34.8 3.5 29 45-73 74-102 (298)
233 PRK10279 hypothetical protein; 76.0 2 4.2E-05 36.2 2.1 36 43-78 23-58 (300)
234 PF00698 Acyl_transf_1: Acyl t 75.3 2 4.3E-05 36.4 2.0 31 43-73 74-104 (318)
235 PF08237 PE-PPE: PE-PPE domain 75.0 16 0.00035 29.3 7.1 40 35-74 28-69 (225)
236 PF06850 PHB_depo_C: PHB de-po 74.8 4.8 0.0001 31.4 3.8 62 182-243 133-202 (202)
237 TIGR03131 malonate_mdcH malona 74.7 3.6 7.9E-05 34.3 3.5 30 44-73 67-96 (295)
238 PF09949 DUF2183: Uncharacteri 72.8 10 0.00023 26.1 4.8 44 40-83 52-97 (100)
239 cd07225 Pat_PNPLA6_PNPLA7 Pata 72.7 5 0.00011 33.9 3.8 32 43-74 33-64 (306)
240 TIGR00128 fabD malonyl CoA-acy 72.3 4.2 9.1E-05 33.7 3.3 30 45-74 74-104 (290)
241 KOG2237 Predicted serine prote 72.2 4.4 9.5E-05 37.3 3.5 73 8-83 500-579 (712)
242 COG1752 RssA Predicted esteras 71.9 5.1 0.00011 33.7 3.7 33 43-75 29-61 (306)
243 cd07198 Patatin Patatin-like p 71.3 5.4 0.00012 30.3 3.4 33 43-75 16-48 (172)
244 PF06057 VirJ: Bacterial virul 70.0 15 0.00033 28.6 5.5 51 183-240 139-189 (192)
245 PF07519 Tannase: Tannase and 68.6 16 0.00034 33.0 6.3 64 184-247 354-431 (474)
246 cd07227 Pat_Fungal_NTE1 Fungal 68.3 7.2 0.00016 32.3 3.7 32 43-74 28-59 (269)
247 cd07210 Pat_hypo_W_succinogene 68.0 8.3 0.00018 30.8 4.0 29 46-74 21-49 (221)
248 KOG1282 Serine carboxypeptidas 67.8 15 0.00033 32.8 5.8 78 6-87 117-212 (454)
249 cd07207 Pat_ExoU_VipD_like Exo 67.4 7.8 0.00017 30.0 3.7 30 45-74 19-48 (194)
250 COG4188 Predicted dienelactone 67.2 6.1 0.00013 34.0 3.1 71 5-76 97-182 (365)
251 KOG2541 Palmitoyl protein thio 67.1 19 0.00042 29.7 5.7 56 35-90 72-130 (296)
252 KOG1283 Serine carboxypeptidas 65.9 15 0.00033 31.1 5.1 76 7-88 72-166 (414)
253 cd01714 ETF_beta The electron 64.7 16 0.00034 28.8 4.9 51 33-84 90-145 (202)
254 PF07519 Tannase: Tannase and 63.6 14 0.00031 33.2 5.0 35 53-87 115-149 (474)
255 TIGR02816 pfaB_fam PfaB family 62.1 8.6 0.00019 35.2 3.3 31 44-74 255-286 (538)
256 cd07230 Pat_TGL4-5_like Triacy 61.8 6.5 0.00014 34.8 2.5 39 43-81 91-129 (421)
257 PF05576 Peptidase_S37: PS-10 61.3 24 0.00051 31.1 5.6 56 184-241 352-412 (448)
258 cd07228 Pat_NTE_like_bacteria 60.7 12 0.00026 28.5 3.5 31 46-76 21-51 (175)
259 KOG3043 Predicted hydrolase re 60.5 6.6 0.00014 31.4 2.0 42 45-87 111-153 (242)
260 cd07209 Pat_hypo_Ecoli_Z1214_l 59.7 13 0.00028 29.5 3.7 32 45-76 18-49 (215)
261 COG2939 Carboxypeptidase C (ca 58.1 16 0.00034 32.9 4.1 58 184-242 426-490 (498)
262 PF11713 Peptidase_C80: Peptid 57.9 6.5 0.00014 29.6 1.6 48 14-65 61-116 (157)
263 cd07231 Pat_SDP1-like Sugar-De 56.5 9.5 0.00021 32.3 2.4 38 44-81 87-124 (323)
264 COG4553 DepA Poly-beta-hydroxy 55.9 40 0.00087 28.3 5.8 56 32-88 149-209 (415)
265 cd07229 Pat_TGL3_like Triacylg 54.7 11 0.00023 33.0 2.5 40 43-82 101-140 (391)
266 PF03490 Varsurf_PPLC: Variant 54.7 13 0.00029 21.8 2.1 32 33-64 5-37 (51)
267 cd07222 Pat_PNPLA4 Patatin-lik 54.3 12 0.00025 30.5 2.6 35 45-80 19-57 (246)
268 cd07205 Pat_PNPLA6_PNPLA7_NTE1 53.5 21 0.00046 27.0 3.9 30 45-74 20-49 (175)
269 cd07232 Pat_PLPL Patain-like p 53.2 9.5 0.00021 33.6 2.0 39 44-82 86-124 (407)
270 COG1505 Serine proteases of th 53.2 43 0.00093 31.0 6.0 78 4-83 448-530 (648)
271 COG0218 Predicted GTPase [Gene 52.1 18 0.0004 28.4 3.2 15 9-23 72-86 (200)
272 cd07208 Pat_hypo_Ecoli_yjju_li 52.1 21 0.00045 29.3 3.8 32 46-77 19-51 (266)
273 cd07224 Pat_like Patatin-like 49.9 24 0.00051 28.5 3.7 33 43-75 17-51 (233)
274 TIGR01840 esterase_phb esteras 49.8 9.6 0.00021 30.0 1.4 23 184-206 169-191 (212)
275 PF05577 Peptidase_S28: Serine 49.1 18 0.0004 32.0 3.2 39 184-225 377-415 (434)
276 KOG1516 Carboxylesterase and r 49.0 23 0.0005 32.4 3.9 56 32-87 169-231 (545)
277 TIGR03712 acc_sec_asp2 accesso 48.1 22 0.00047 32.0 3.4 37 40-76 342-381 (511)
278 KOG2565 Predicted hydrolases o 46.9 22 0.00048 30.9 3.1 59 184-244 405-464 (469)
279 COG2830 Uncharacterized protei 46.9 13 0.00029 28.1 1.6 34 53-88 57-90 (214)
280 cd07204 Pat_PNPLA_like Patatin 46.9 29 0.00062 28.2 3.8 34 44-77 18-56 (243)
281 PRK12467 peptide synthase; Pro 43.1 1.1E+02 0.0024 35.7 8.5 75 3-86 3715-3793(3956)
282 PF07521 RMMBL: RNA-metabolisi 43.0 62 0.0013 18.2 3.9 33 6-58 6-38 (43)
283 cd07212 Pat_PNPLA9 Patatin-lik 42.8 36 0.00078 28.8 3.9 18 57-74 36-53 (312)
284 cd07218 Pat_iPLA2 Calcium-inde 42.4 37 0.0008 27.6 3.8 24 56-79 33-57 (245)
285 cd07206 Pat_TGL3-4-5_SDP1 Tria 40.3 34 0.00074 28.8 3.3 32 47-78 91-122 (298)
286 cd07221 Pat_PNPLA3 Patatin-lik 39.7 44 0.00096 27.3 3.8 27 55-81 34-61 (252)
287 PF15660 Imm49: Immunity prote 38.0 31 0.00066 21.4 2.0 22 32-53 62-83 (84)
288 cd07220 Pat_PNPLA2 Patatin-lik 36.3 50 0.0011 27.0 3.6 21 55-75 38-58 (249)
289 PF03681 UPF0150: Uncharacteri 36.3 49 0.0011 19.0 2.7 32 5-48 12-43 (48)
290 PF14253 AbiH: Bacteriophage a 36.1 40 0.00087 27.5 3.2 14 52-65 234-247 (270)
291 TIGR02883 spore_cwlD N-acetylm 34.7 60 0.0013 25.1 3.8 14 8-22 1-14 (189)
292 COG3621 Patatin [General funct 33.7 65 0.0014 27.5 3.9 39 39-77 23-66 (394)
293 cd07211 Pat_PNPLA8 Patatin-lik 33.3 52 0.0011 27.7 3.4 16 57-72 45-60 (308)
294 cd01819 Patatin_and_cPLA2 Pata 32.9 67 0.0015 23.9 3.6 26 46-71 19-46 (155)
295 KOG1283 Serine carboxypeptidas 32.2 24 0.00051 30.0 1.1 31 210-240 381-411 (414)
296 COG4850 Uncharacterized conser 32.0 75 0.0016 27.1 4.0 45 42-87 267-314 (373)
297 PF15566 Imm18: Immunity prote 31.9 64 0.0014 19.3 2.6 30 36-65 4-33 (52)
298 PF10929 DUF2811: Protein of u 31.1 21 0.00046 21.8 0.5 24 223-246 21-44 (57)
299 PF00448 SRP54: SRP54-type pro 30.3 1E+02 0.0023 24.0 4.4 65 5-84 82-148 (196)
300 PF09994 DUF2235: Uncharacteri 29.7 1.1E+02 0.0025 25.3 4.8 40 34-73 71-112 (277)
301 PLN00179 acyl- [acyl-carrier p 28.9 54 0.0012 28.5 2.7 69 12-82 288-363 (390)
302 smart00824 PKS_TE Thioesterase 28.7 56 0.0012 24.8 2.7 56 183-239 153-211 (212)
303 TIGR02813 omega_3_PfaA polyket 28.6 53 0.0011 36.4 3.2 28 44-71 665-692 (2582)
304 cd02651 nuc_hydro_IU_UC_XIUA n 28.2 2.3E+02 0.0049 23.8 6.4 48 38-88 100-151 (302)
305 PRK10319 N-acetylmuramoyl-l-al 27.6 1E+02 0.0022 25.9 4.1 16 6-22 55-70 (287)
306 TIGR03607 patatin-related prot 27.3 68 0.0015 30.7 3.4 22 51-72 64-85 (739)
307 PLN02752 [acyl-carrier protein 27.1 58 0.0013 27.9 2.7 18 56-73 127-144 (343)
308 PF01734 Patatin: Patatin-like 26.9 61 0.0013 24.2 2.6 21 54-74 28-48 (204)
309 COG0331 FabD (acyl-carrier-pro 26.5 72 0.0016 27.1 3.1 22 51-72 83-104 (310)
310 cd01985 ETF The electron trans 26.1 1.5E+02 0.0033 22.5 4.7 51 33-84 73-125 (181)
311 cd07217 Pat17_PNPLA8_PNPLA9_li 25.8 55 0.0012 28.2 2.3 17 57-73 45-61 (344)
312 cd07213 Pat17_PNPLA8_PNPLA9_li 25.6 56 0.0012 27.2 2.3 19 56-74 37-55 (288)
313 COG1092 Predicted SAM-dependen 25.4 1.8E+02 0.004 25.6 5.4 18 5-22 289-306 (393)
314 COG1957 URH1 Inosine-uridine n 25.4 2.9E+02 0.0062 23.5 6.4 50 37-89 102-155 (311)
315 PF10503 Esterase_phd: Esteras 23.7 57 0.0012 26.1 1.9 22 183-204 169-190 (220)
316 PRK13253 citrate lyase subunit 23.6 1.5E+02 0.0033 20.1 3.6 28 38-65 44-71 (92)
317 PF06857 ACP: Malonate decarbo 23.4 1.5E+02 0.0032 19.9 3.5 28 38-65 43-70 (87)
318 PRK14974 cell division protein 23.2 2.9E+02 0.0064 23.7 6.2 65 5-84 221-287 (336)
319 PRK06731 flhF flagellar biosyn 23.1 4.4E+02 0.0095 21.8 7.3 64 6-84 154-219 (270)
320 PF04814 HNF-1_N: Hepatocyte n 22.9 51 0.0011 25.4 1.4 31 224-254 111-141 (180)
321 PF03141 Methyltransf_29: Puta 22.9 1.3E+02 0.0028 27.3 4.1 46 35-80 97-142 (506)
322 PRK07877 hypothetical protein; 22.2 1.4E+02 0.003 28.7 4.4 38 47-86 102-139 (722)
323 PRK11789 N-acetyl-anhydromuran 22.2 81 0.0017 24.5 2.4 27 36-62 132-158 (185)
324 PLN02717 uridine nucleosidase 22.0 3.4E+02 0.0073 23.0 6.4 47 39-88 104-154 (316)
325 PF08197 TT_ORF2a: pORF2a trun 21.4 64 0.0014 18.4 1.2 13 8-20 36-48 (49)
326 cd01853 Toc34_like Toc34-like 21.3 1.2E+02 0.0026 24.7 3.4 16 6-21 78-93 (249)
327 cd01715 ETF_alpha The electron 21.0 2.1E+02 0.0045 21.5 4.5 41 33-74 65-106 (168)
328 cd06583 PGRP Peptidoglycan rec 20.8 1.3E+02 0.0029 20.9 3.2 49 8-64 68-117 (126)
329 PF10081 Abhydrolase_9: Alpha/ 20.5 1.8E+02 0.0038 24.4 4.1 34 54-87 110-146 (289)
330 PF00070 Pyr_redox: Pyridine n 20.2 78 0.0017 20.2 1.7 30 55-87 2-31 (80)
331 PRK04940 hypothetical protein; 20.2 2.4E+02 0.0052 21.8 4.6 53 184-242 125-179 (180)
332 cd06143 PAN2_exo DEDDh 3'-5' e 20.2 1.1E+02 0.0024 23.5 2.8 12 53-64 101-112 (174)
333 PF10605 3HBOH: 3HB-oligomer h 20.0 70 0.0015 29.8 1.9 40 184-223 556-603 (690)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.7e-38 Score=265.91 Aligned_cols=242 Identities=77% Similarity=1.357 Sum_probs=164.0
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+.+.+........|+++++++|+.++++++++++++||||||||+||+.+|.++|++|+++
T Consensus 51 ~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 130 (294)
T PLN02824 51 VLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGV 130 (294)
T ss_pred HHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEE
Confidence 47788999999999999998764211100135899999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|++++.+.+......+....+..+.+...+........++........+...+...+.......++..+.+..++..+..
T Consensus 131 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (294)
T PLN02824 131 MLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGA 210 (294)
T ss_pred EEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchH
Confidence 99997654322111111112222222222222112223344333333333333333333334555565555555444444
Q ss_pred HHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 025026 162 ADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 239 (259)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~f 239 (259)
.+.+.++..+.......+.+. ++|||+|+|++|.+++.+.++.+.+..+++++++++++||++++|+|++|++.|.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 211 VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 444444332222112222233 399999999999999998888888888888999999999999999999999999999
Q ss_pred HHhc
Q 025026 240 VTRH 243 (259)
Q Consensus 240 l~~~ 243 (259)
++++
T Consensus 291 l~~~ 294 (294)
T PLN02824 291 VARH 294 (294)
T ss_pred HhcC
Confidence 9764
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=8.9e-34 Score=243.47 Aligned_cols=237 Identities=35% Similarity=0.609 Sum_probs=149.7
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhh-Ccccccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRG 80 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~ 80 (259)
.|+++|+||++|+||||.|+.+.. ..|+++++++++.++++++++++++||||||||+|++.+|.+ +|++|++
T Consensus 110 ~L~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~ 183 (360)
T PLN02679 110 VLAKNYTVYAIDLLGFGASDKPPG------FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRG 183 (360)
T ss_pred HHhcCCEEEEECCCCCCCCCCCCC------ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCE
Confidence 367889999999999999987531 358999999999999999999999999999999999999875 7999999
Q ss_pred eEEeccchhhhhccCC-CCCC---cchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccc
Q 025026 81 MILLNISLRMLHIKKQ-PWYG---RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (259)
Q Consensus 81 lvli~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (259)
+|++++.......... .+.. .+....+............++........++..+...+.....+.++..+.+..+.
T Consensus 184 LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PLN02679 184 LVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA 263 (360)
T ss_pred EEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc
Confidence 9999975321100000 0000 00000000111111111122222222222333332223333344555555544333
Q ss_pred cCcchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchh-----hhhhcCCCCcccEEEcCCCCCCCCCCCh
Q 025026 157 LETGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIEL-----GRAYGNFDSVEDFIVLPNVGHCPQDEAP 229 (259)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~-----~~~~~~~~~~~~~~~i~~~GH~~~~e~p 229 (259)
..+...+.+...............+. ++|||+|||++|.++|.+. ...+.+..|++++++|++|||++++|+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~P 343 (360)
T PLN02679 264 DDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRP 343 (360)
T ss_pred cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCH
Confidence 33333344333321111111112233 3999999999999998763 2345556788999999999999999999
Q ss_pred hhHHHHHHHHHHhcC
Q 025026 230 HLVNPLVESFVTRHA 244 (259)
Q Consensus 230 ~~~~~~i~~fl~~~~ 244 (259)
++|++.|.+|+++..
T Consensus 344 e~~~~~I~~FL~~~~ 358 (360)
T PLN02679 344 DLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998643
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.4e-32 Score=226.70 Aligned_cols=230 Identities=18% Similarity=0.232 Sum_probs=139.0
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+||++|+||||.|+.+. ..|+++++++|+.++++++++++++||||||||.||+.+|.++|++|+++
T Consensus 49 ~L~~~~~via~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 121 (295)
T PRK03592 49 HLAGLGRCLAPDLIGMGASDKPD-------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGI 121 (295)
T ss_pred HHhhCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEE
Confidence 36778999999999999998763 35899999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|++++...... ... ......+ +...++....+...+. .....+...+.... ....+++....+..+...+..
T Consensus 122 il~~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 193 (295)
T PRK03592 122 AFMEAIVRPMT--WDD-FPPAVRE-LFQALRSPGEGEEMVL--EENVFIERVLPGSI--LRPLSDEEMAVYRRPFPTPES 193 (295)
T ss_pred EEECCCCCCcc--hhh-cchhHHH-HHHHHhCccccccccc--chhhHHhhcccCcc--cccCCHHHHHHHHhhcCCchh
Confidence 99997432110 000 0000001 1111111000000000 00000110000000 011233333222221111111
Q ss_pred HHHHHHHHHhhC--CC---------CccccCC--CCCeEEEecCCCCCCCchhh-hhhcCCCCcccEEEcCCCCCCCCCC
Q 025026 162 ADVFLEFICYSG--GP---------LPEELLP--QCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDE 227 (259)
Q Consensus 162 ~~~~~~~~~~~~--~~---------~~~~~~~--~~PvliI~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~GH~~~~e 227 (259)
...+..+..... .. .....+. ++|||+|+|++|.+++.... +.+.+..++++++++++|||++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 273 (295)
T PRK03592 194 RRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQED 273 (295)
T ss_pred hhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhc
Confidence 111111110000 00 0011122 49999999999999954444 3345567789999999999999999
Q ss_pred ChhhHHHHHHHHHHhcCCC
Q 025026 228 APHLVNPLVESFVTRHATP 246 (259)
Q Consensus 228 ~p~~~~~~i~~fl~~~~~~ 246 (259)
+|++|++.|.+|+++...+
T Consensus 274 ~p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 274 SPEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred CHHHHHHHHHHHHHHhccc
Confidence 9999999999999876554
No 4
>PLN02578 hydrolase
Probab=100.00 E-value=6.6e-31 Score=225.36 Aligned_cols=231 Identities=30% Similarity=0.571 Sum_probs=148.5
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+++. ..|+...+++|+.+++++++.+++++|||||||+|++.+|.++|++|+++
T Consensus 108 ~l~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~l 180 (354)
T PLN02578 108 ELAKKYKVYALDLLGFGWSDKAL-------IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGV 180 (354)
T ss_pred HHhcCCEEEEECCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceE
Confidence 36778999999999999998753 45899999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCC-CCC---CcchH-----HHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 025026 82 ILLNISLRMLHIKKQ-PWY---GRPLI-----RSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (259)
Q Consensus 82 vli~~~~~~~~~~~~-~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (259)
|++++++........ ... ..... ..+....... .....+.....+..++..+...+.+.....+...+.+
T Consensus 181 vLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (354)
T PLN02578 181 ALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRV-VLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESI 259 (354)
T ss_pred EEECCCccccccccccccccccccchhhHHHhHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHH
Confidence 999875432111100 000 00011 1111111000 0000111111222232222222333233344444444
Q ss_pred hccccCcchHHHHHHHHH-hh---CCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCC
Q 025026 153 LQPGLETGAADVFLEFIC-YS---GGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 226 (259)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 226 (259)
..+...+.....+.+... +. ......+.+. ++|+++|||++|.+++.+.++.+.+..|+++++++ ++||++|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~ 338 (354)
T PLN02578 260 TEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHD 338 (354)
T ss_pred HhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccc
Confidence 333333333333333221 10 1111112233 39999999999999999888888888888999999 69999999
Q ss_pred CChhhHHHHHHHHHH
Q 025026 227 EAPHLVNPLVESFVT 241 (259)
Q Consensus 227 e~p~~~~~~i~~fl~ 241 (259)
|+|++|++.|.+|++
T Consensus 339 e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 339 EVPEQVNKALLEWLS 353 (354)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999999985
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=3e-31 Score=220.12 Aligned_cols=220 Identities=21% Similarity=0.248 Sum_probs=137.9
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+||++|+||||+|+.+. ..|+++++++|+.++++++++++++||||||||+||+.+|.++|++|+++
T Consensus 47 ~L~~~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~l 119 (276)
T TIGR02240 47 ALDPDLEVIAFDVPGVGGSSTPR-------HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKL 119 (276)
T ss_pred HhccCceEEEECCCCCCCCCCCC-------CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhhe
Confidence 47889999999999999998653 35799999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|+++++...... + ..+ .......... .+............. +.......++..............
T Consensus 120 vl~~~~~~~~~~---~--~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 184 (276)
T TIGR02240 120 ILAATAAGAVMV---P--GKP--KVLMMMASPR----RYIQPSHGIHIAPDI----YGGAFRRDPELAMAHASKVRSGGK 184 (276)
T ss_pred EEeccCCccccC---C--Cch--hHHHHhcCch----hhhccccccchhhhh----ccceeeccchhhhhhhhhcccCCC
Confidence 999976432100 0 000 0000000000 000000000000000 000000011111111100000000
Q ss_pred HHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 025026 162 ADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 239 (259)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~f 239 (259)
...+.......... ..+.+. ++|||+|+|++|++++.+.++.+.+..|+++++++++ ||++++|+|++|++.|.+|
T Consensus 185 ~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~f 262 (276)
T TIGR02240 185 LGYYWQLFAGLGWT-SIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKF 262 (276)
T ss_pred chHHHHHHHHcCCc-hhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHH
Confidence 11111111111111 111223 3999999999999999998888887788899999975 9999999999999999999
Q ss_pred HHhcCC
Q 025026 240 VTRHAT 245 (259)
Q Consensus 240 l~~~~~ 245 (259)
+++...
T Consensus 263 l~~~~~ 268 (276)
T TIGR02240 263 LAEERQ 268 (276)
T ss_pred HHHhhh
Confidence 987543
No 6
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=1.6e-31 Score=217.22 Aligned_cols=235 Identities=23% Similarity=0.318 Sum_probs=141.1
Q ss_pred cCCC-CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 3 L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
|+.. |||+|+|+||||.|+.|.. ...||+..++.|+..++++++.++++++||||||+||+.+|+.+|++|+++
T Consensus 67 la~~~~rviA~DlrGyG~Sd~P~~-----~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~l 141 (322)
T KOG4178|consen 67 LASRGYRVIAPDLRGYGFSDAPPH-----ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGL 141 (322)
T ss_pred hhhcceEEEecCCCCCCCCCCCCC-----cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceE
Confidence 5555 9999999999999999863 367999999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHH-HHhhhhHHHHHHHhhcChHHHHHHHHhhcC-----C------CCCCcHHHH
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQN-LLRNTAAGKLFYKMVATSESVRNILCQCYN-----D------TSQVTEELV 149 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~ 149 (259)
|+++++...+..+........+.+.+.. ...........++...++.....++..... . ...++++.+
T Consensus 142 v~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi 221 (322)
T KOG4178|consen 142 VTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDI 221 (322)
T ss_pred EEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHH
Confidence 9999865421100000000000000000 000000000001110011111111100000 0 012344444
Q ss_pred HHHhccccCcc---hHHHHHHHHHhhCCCCccccCCC--CCeEEEecCCCCCCCch-hhhhhcCCCCcc-cEEEcCCCCC
Q 025026 150 EKILQPGLETG---AADVFLEFICYSGGPLPEELLPQ--CPVLIAWGDKDPWEPIE-LGRAYGNFDSVE-DFIVLPNVGH 222 (259)
Q Consensus 150 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~PvliI~G~~D~~~~~~-~~~~~~~~~~~~-~~~~i~~~GH 222 (259)
+.+...+...+ ..+...++.. ........+.+ +||++|||+.|.+.+.. .+..+++..|+. +.++++++||
T Consensus 222 ~~~~~~f~~~g~~gplNyyrn~~r--~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH 299 (322)
T KOG4178|consen 222 AFYVSKFQIDGFTGPLNYYRNFRR--NWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGH 299 (322)
T ss_pred HHHHhccccccccccchhhHHHhh--CchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcc
Confidence 44433321111 1222222211 11000111222 99999999999987665 344456665554 7889999999
Q ss_pred CCCCCChhhHHHHHHHHHHhcC
Q 025026 223 CPQDEAPHLVNPLVESFVTRHA 244 (259)
Q Consensus 223 ~~~~e~p~~~~~~i~~fl~~~~ 244 (259)
+++.|+|++|+++|..|+++..
T Consensus 300 ~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 300 FVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred cccccCHHHHHHHHHHHHHhhc
Confidence 9999999999999999998753
No 7
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=2.6e-31 Score=218.08 Aligned_cols=218 Identities=16% Similarity=0.136 Sum_probs=135.3
Q ss_pred c-CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 3 L-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 3 L-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
| +.+|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++. ++++||||||||+|++.+|.++|++|++
T Consensus 26 L~~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~ 99 (255)
T PLN02965 26 LDAAGFKSTCVDLTGAGISLTDSN------TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISM 99 (255)
T ss_pred HhhCCceEEEecCCcCCCCCCCcc------ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeE
Confidence 5 5679999999999999976431 358999999999999999987 4999999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhh-hHHHHHHHhhc--Ch-H-HH-HHHHHhhcCCCCCCcHH-HHHHHh
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-AAGKLFYKMVA--TS-E-SV-RNILCQCYNDTSQVTEE-LVEKIL 153 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~-~-~~-~~~~~~~~~~~~~~~~~-~~~~~~ 153 (259)
+|++++........ . . ..+....... ......+.... .. . .. .......+......... ......
T Consensus 100 lvl~~~~~~~~~~~----~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (255)
T PLN02965 100 AIYVAAAMVKPGSI----I-S---PRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLL 171 (255)
T ss_pred EEEEccccCCCCCC----c-c---HHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhc
Confidence 99999753211000 0 0 0000000000 00000000000 00 0 00 00000000011100000 111111
Q ss_pred ccccCcchHHHHHHHHHhhCCCCcccc-CCCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhH
Q 025026 154 QPGLETGAADVFLEFICYSGGPLPEEL-LPQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 232 (259)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~ 232 (259)
.+.. ...+.... ...... ..++|+++|+|++|..+|...++.+.+..|+++++++++|||++++|+|++|
T Consensus 172 ~~~~----~~~~~~~~-----~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 172 RPAP----VRAFQDLD-----KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCC----Ccchhhhh-----hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHH
Confidence 1100 00010000 011111 1249999999999999999988889888888999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 025026 233 NPLVESFVTRH 243 (259)
Q Consensus 233 ~~~i~~fl~~~ 243 (259)
+++|.+|++..
T Consensus 243 ~~~l~~~~~~~ 253 (255)
T PLN02965 243 FQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHh
Confidence 99999999764
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=1.8e-30 Score=213.04 Aligned_cols=215 Identities=19% Similarity=0.225 Sum_probs=130.3
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+.+ ..|+++++++++.+ +++++++||||||||+|++.+|.++|++|+++
T Consensus 35 ~L~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 102 (256)
T PRK10349 35 ELSSHFTLHLVDLPGFGRSRGF--------GALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQAL 102 (256)
T ss_pred HHhcCCEEEEecCCCCCCCCCC--------CCCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheE
Confidence 4678899999999999999753 24788888877654 56789999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH---HHHHhccccC
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL---VEKILQPGLE 158 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 158 (259)
|++++++........+.........+...+... +. .....++............+. ...+.. ...
T Consensus 103 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 170 (256)
T PRK10349 103 VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDD------FQ-----RTVERFLALQTMGTETARQDARALKKTVLA-LPM 170 (256)
T ss_pred EEecCccceecCCCCCcccHHHHHHHHHHHHhc------hH-----HHHHHHHHHHHccCchHHHHHHHHHHHhhc-cCC
Confidence 999875442211111110001111111100000 00 001111100000000001111 111110 000
Q ss_pred cchHHHHHHHHH-hhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHH
Q 025026 159 TGAADVFLEFIC-YSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 235 (259)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 235 (259)
+. ......... ....+. .+.+. ++|||+|+|++|.++|.+.++.+.+..++++++++|+|||++++|+|++|++.
T Consensus 171 ~~-~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~ 248 (256)
T PRK10349 171 PE-VDVLNGGLEILKTVDL-RQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHL 248 (256)
T ss_pred Cc-HHHHHHHHHHHHhCcc-HHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHH
Confidence 10 001000000 011111 12233 39999999999999999888888888889999999999999999999999999
Q ss_pred HHHHHHh
Q 025026 236 VESFVTR 242 (259)
Q Consensus 236 i~~fl~~ 242 (259)
+.+|-++
T Consensus 249 l~~~~~~ 255 (256)
T PRK10349 249 LVALKQR 255 (256)
T ss_pred HHHHhcc
Confidence 9998654
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=7e-30 Score=212.93 Aligned_cols=220 Identities=18% Similarity=0.234 Sum_probs=134.3
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+.+.. ..|+++++++++.+++++++++++++|||||||+|++.+|..+|++|+++
T Consensus 56 ~l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~l 129 (286)
T PRK03204 56 ALRDRFRCVAPDYLGFGLSERPSG------FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGV 129 (286)
T ss_pred HHhCCcEEEEECCCCCCCCCCCCc------cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEE
Confidence 367789999999999999987531 35889999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|++++..... ... ....+.............+. ........+... .....+++....+......+..
T Consensus 130 vl~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 196 (286)
T PRK03204 130 VLGNTWFWPA-------DTL-AMKAFSRVMSSPPVQYAILR---RNFFVERLIPAG--TEHRPSSAVMAHYRAVQPNAAA 196 (286)
T ss_pred EEECccccCC-------Cch-hHHHHHHHhccccchhhhhh---hhHHHHHhcccc--ccCCCCHHHHHHhcCCCCCHHH
Confidence 9987642110 000 00001000000000000000 000001111000 0011222222222221111111
Q ss_pred HHHHHHHH-Hhh--C---CCCccc---cCCCCCeEEEecCCCCCCCch-hhhhhcCCCCcccEEEcCCCCCCCCCCChhh
Q 025026 162 ADVFLEFI-CYS--G---GPLPEE---LLPQCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 231 (259)
Q Consensus 162 ~~~~~~~~-~~~--~---~~~~~~---~~~~~PvliI~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~ 231 (259)
...+..+. .+. . ...... ...++|||+|||++|..++.. .++.+.+..|++++++|+++||++++|+|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~ 276 (286)
T PRK03204 197 RRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDR 276 (286)
T ss_pred HHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHH
Confidence 11110000 000 0 000000 012599999999999987554 4667777888899999999999999999999
Q ss_pred HHHHHHHHH
Q 025026 232 VNPLVESFV 240 (259)
Q Consensus 232 ~~~~i~~fl 240 (259)
|+++|.+|+
T Consensus 277 ~~~~i~~~~ 285 (286)
T PRK03204 277 IAAAIIERF 285 (286)
T ss_pred HHHHHHHhc
Confidence 999999997
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=5.2e-30 Score=209.94 Aligned_cols=213 Identities=17% Similarity=0.256 Sum_probs=135.7
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|..+ ..++++++++|+.+++++++.++++||||||||++++.+|.++|++|+++
T Consensus 38 ~l~~~~~vi~~D~~G~G~s~~~--------~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~l 109 (255)
T PRK10673 38 DLVNDHDIIQVDMRNHGLSPRD--------PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKL 109 (255)
T ss_pred HHhhCCeEEEECCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceE
Confidence 3678899999999999999864 34799999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcc-
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG- 160 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (259)
|++++++..... .........+....... ..........+..... ..+....+........
T Consensus 110 vli~~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 171 (255)
T PRK10673 110 VAIDIAPVDYHV----RRHDEIFAAINAVSEAG---------ATTRQQAAAIMRQHLN-----EEGVIQFLLKSFVDGEW 171 (255)
T ss_pred EEEecCCCCccc----hhhHHHHHHHHHhhhcc---------cccHHHHHHHHHHhcC-----CHHHHHHHHhcCCccee
Confidence 999864321100 00000011111000000 0000000001100000 0011110000000000
Q ss_pred --hHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHH
Q 025026 161 --AADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 236 (259)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i 236 (259)
....+........ ....+. ++|+|+|+|++|.+++.+..+.+.+..|++++++++++||++++|+|++|++.|
T Consensus 172 ~~~~~~~~~~~~~~~---~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l 248 (255)
T PRK10673 172 RFNVPVLWDQYPHIV---GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAI 248 (255)
T ss_pred EeeHHHHHHhHHHHh---CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHH
Confidence 0000111000000 001122 399999999999999988888888888889999999999999999999999999
Q ss_pred HHHHHhc
Q 025026 237 ESFVTRH 243 (259)
Q Consensus 237 ~~fl~~~ 243 (259)
.+|++++
T Consensus 249 ~~fl~~~ 255 (255)
T PRK10673 249 RRYLNDK 255 (255)
T ss_pred HHHHhcC
Confidence 9999753
No 11
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=2.3e-29 Score=216.38 Aligned_cols=235 Identities=18% Similarity=0.204 Sum_probs=134.3
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHhcCCCEE-EEEeCcchHHHHHHHhhCcccccc
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC-KDVVKDQAF-FICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l-~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
++++|+||++|+||||.|+.+..........|+++++++++.+++ +++++++++ ||||||||+||+.+|.++|++|++
T Consensus 102 ~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~ 181 (360)
T PRK06489 102 DASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDA 181 (360)
T ss_pred cccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhe
Confidence 367899999999999999875311000001489999999998855 889999986 899999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHH---HH----------HhhcCCCCCCcHH
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRN---IL----------CQCYNDTSQVTEE 147 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~ 147 (259)
+|++++.+..... ..+. .........+..... .............. .. ............+
T Consensus 182 LVLi~s~~~~~~~--~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T PRK06489 182 LMPMASQPTEMSG--RNWM---WRRMLIESIRNDPAW-NNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADK 255 (360)
T ss_pred eeeeccCcccccH--HHHH---HHHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHH
Confidence 9999875321100 0000 000000000000000 00000000000000 00 0000000000111
Q ss_pred HHHHHhccccCcchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhh--hhhcCCCCcccEEEcCCC---
Q 025026 148 LVEKILQPGLETGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELG--RAYGNFDSVEDFIVLPNV--- 220 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~--- 220 (259)
..+.......... ...+.............+.+. ++|||+|+|++|.++|.+.+ +.+.+..|++++++||+|
T Consensus 256 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~ 334 (360)
T PRK06489 256 LVDERLAAPVTAD-ANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPET 334 (360)
T ss_pred HHHHHHHhhhhcC-HHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCC
Confidence 2221111111111 111111111111111112233 39999999999999998865 567777888999999996
Q ss_pred -CCCCCCCChhhHHHHHHHHHHhcCC
Q 025026 221 -GHCPQDEAPHLVNPLVESFVTRHAT 245 (259)
Q Consensus 221 -GH~~~~e~p~~~~~~i~~fl~~~~~ 245 (259)
||+++ |+|++|+++|.+|+++...
T Consensus 335 ~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 335 RGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred CCcccc-cCHHHHHHHHHHHHHhccc
Confidence 99998 8999999999999987654
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=2.8e-29 Score=208.64 Aligned_cols=218 Identities=22% Similarity=0.218 Sum_probs=131.2
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
+++|+|+++|+||||.|+.+... ..+++ .+++|+.++++.+++++++++||||||++++.+|.++|++|+++|+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~~-----~~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 131 (282)
T TIGR03343 58 DAGYRVILKDSPGFNKSDAVVMD-----EQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLIL 131 (282)
T ss_pred hCCCEEEEECCCCCCCCCCCcCc-----ccccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEE
Confidence 35699999999999999865210 11222 5689999999999999999999999999999999999999999999
Q ss_pred eccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcccc-CcchH
Q 025026 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL-ETGAA 162 (259)
Q Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 162 (259)
+++....... ..+ ......+.+....... ........+..........+++..+....... .+...
T Consensus 132 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (282)
T TIGR03343 132 MGPGGLGPSL-FAP-MPMEGIKLLFKLYAEP-----------SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHL 198 (282)
T ss_pred ECCCCCCccc-ccc-CchHHHHHHHHHhcCC-----------CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHH
Confidence 9864211000 000 0000001111000000 00001111110001111122222211100000 00011
Q ss_pred HHHHHHHH---hhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 163 DVFLEFIC---YSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 163 ~~~~~~~~---~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
..+..... ....+. ...+. ++|+|+|+|++|.+++.+.++.+.+..|++++++++++||+++.|+|++|+++|.
T Consensus 199 ~~~~~~~~~~~~~~~~~-~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 199 KNFLISSQKAPLSTWDV-TARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred HHHHHhccccccccchH-HHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 11110000 000000 11122 3999999999999999998888888888999999999999999999999999999
Q ss_pred HHHH
Q 025026 238 SFVT 241 (259)
Q Consensus 238 ~fl~ 241 (259)
+|++
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9996
No 13
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.3e-30 Score=216.81 Aligned_cols=233 Identities=30% Similarity=0.444 Sum_probs=137.9
Q ss_pred ccCCC--CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 2 VLAKS--HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 2 ~L~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
.|+++ ++|+|+|++|||.|+..+. ...|++.++++.+..+....+.++++|||||+||.+|+.+|+.+|+.|+
T Consensus 80 ~L~~~~~~~v~aiDl~G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~ 154 (326)
T KOG1454|consen 80 LLSKAKGLRVLAIDLPGHGYSSPLPR-----GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVD 154 (326)
T ss_pred ccccccceEEEEEecCCCCcCCCCCC-----CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCccccc
Confidence 36666 9999999999995554321 2459999999999999999999999999999999999999999999999
Q ss_pred ceEEec---cchhhhhccCCCCCCcchHHHHHHHHhhhhH---HHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 025026 80 GMILLN---ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA---GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (259)
Q Consensus 80 ~lvli~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (259)
++|+++ +..... .+.. ......+......... ....+....-...+.......+.+.....+.....+.
T Consensus 155 ~lv~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (326)
T KOG1454|consen 155 SLVLLDLLGPPVYST--PKGI---KGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLS 229 (326)
T ss_pred ceeeecccccccccC--Ccch---hHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhhee
Confidence 999655 222111 0000 0000111100000000 0000000000000000000001111111111111111
Q ss_pred ccccCcchHHHHHHHHHhhCC--CCccccC---CCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCC
Q 025026 154 QPGLETGAADVFLEFICYSGG--PLPEELL---PQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 228 (259)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~ 228 (259)
++.......+.+..++..... ....... .+||+|+|||++|.++|.+.+..+.+..|++++++|++|||.+|+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~ 309 (326)
T KOG1454|consen 230 RPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLER 309 (326)
T ss_pred cccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCC
Confidence 110011112222221111111 1111112 23999999999999999998888877679999999999999999999
Q ss_pred hhhHHHHHHHHHHhcC
Q 025026 229 PHLVNPLVESFVTRHA 244 (259)
Q Consensus 229 p~~~~~~i~~fl~~~~ 244 (259)
|++|+++|..|+....
T Consensus 310 Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 310 PEEVAALLRSFIARLR 325 (326)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998753
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=4.9e-29 Score=209.49 Aligned_cols=219 Identities=19% Similarity=0.264 Sum_probs=130.5
Q ss_pred cCC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 3 L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
|++ +|+|+++|+||||+|+++.. ...|+++++++|+.++++++++++++||||||||+||+.+|.++|++|+++
T Consensus 69 L~~~gy~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 143 (302)
T PRK00870 69 LAAAGHRVIAPDLIGFGRSDKPTR-----REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARL 143 (302)
T ss_pred HHhCCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEE
Confidence 654 69999999999999986531 135899999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhh---hHHHHHHHhh----cChHHHHHHHHhhcCCCC-CCcHHHHHHHh
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT---AAGKLFYKMV----ATSESVRNILCQCYNDTS-QVTEELVEKIL 153 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 153 (259)
|++++...... .... .....+....... .... ++... ...+.... +...+.... .........+.
T Consensus 144 vl~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 216 (302)
T PRK00870 144 VVANTGLPTGD----GPMP-DAFWAWRAFSQYSPVLPVGR-LVNGGTVRDLSDAVRAA-YDAPFPDESYKAGARAFPLLV 216 (302)
T ss_pred EEeCCCCCCcc----ccch-HHHhhhhcccccCchhhHHH-HhhccccccCCHHHHHH-hhcccCChhhhcchhhhhhcC
Confidence 99986421100 0000 0000000000000 0000 00000 00000100 000000000 00000000000
Q ss_pred ccccCcchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCccc---EEEcCCCCCCCCCCC
Q 025026 154 QPGLETGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVED---FIVLPNVGHCPQDEA 228 (259)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~GH~~~~e~ 228 (259)
............... ...+. ++||++|+|++|+.+|... +.+.+..++++ +++++++||++++|+
T Consensus 217 ~~~~~~~~~~~~~~~---------~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 286 (302)
T PRK00870 217 PTSPDDPAVAANRAA---------WAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDS 286 (302)
T ss_pred CCCCCCcchHHHHHH---------HHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhC
Confidence 000000000000000 01122 3999999999999998755 66777777666 889999999999999
Q ss_pred hhhHHHHHHHHHHhc
Q 025026 229 PHLVNPLVESFVTRH 243 (259)
Q Consensus 229 p~~~~~~i~~fl~~~ 243 (259)
|++|++.|.+|++++
T Consensus 287 p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 287 GEELAEAVLEFIRAT 301 (302)
T ss_pred hHHHHHHHHHHHhcC
Confidence 999999999999764
No 15
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=6.7e-29 Score=211.94 Aligned_cols=229 Identities=10% Similarity=0.075 Sum_probs=131.6
Q ss_pred ccC-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHH-----HHHHHHH----HHHHhcCCC-EEEEEeCcchHHHHHH
Q 025026 2 VLA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFET-----WASQLND----FCKDVVKDQ-AFFICNSIGGLVGLQA 70 (259)
Q Consensus 2 ~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~-----~a~dl~~----~l~~l~~~~-~~lvGhS~Gg~ia~~~ 70 (259)
.|. ++||||++|+||||.|+.+... ...|++++ +++|+.+ +++++++++ ++||||||||+||+.+
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~ 141 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNT----PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHW 141 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCC----CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHH
Confidence 354 5799999999999999865311 01344433 5666665 778899999 5899999999999999
Q ss_pred HhhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhh--------------hhH---HHHHHHhhcChHHHHHH
Q 025026 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN--------------TAA---GKLFYKMVATSESVRNI 133 (259)
Q Consensus 71 a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~~~~~~~~~~~~ 133 (259)
|.+||++|+++|+++++++..... ....+.....+.. ... ...+......+...+..
T Consensus 142 a~~~P~~V~~Lvli~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (339)
T PRK07581 142 AVRYPDMVERAAPIAGTAKTTPHN------FVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQE 215 (339)
T ss_pred HHHCHHHHhhheeeecCCCCCHHH------HHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhh
Confidence 999999999999998754321000 0000000000000 000 00000000000000000
Q ss_pred HHhhcCCCC-CCcHHHHHHHhccc---cCcchHHHHHH-HHHhh--CCC----CccccCC--CCCeEEEecCCCCCCCch
Q 025026 134 LCQCYNDTS-QVTEELVEKILQPG---LETGAADVFLE-FICYS--GGP----LPEELLP--QCPVLIAWGDKDPWEPIE 200 (259)
Q Consensus 134 ~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~--~~~----~~~~~~~--~~PvliI~G~~D~~~~~~ 200 (259)
.+.... ...++......... ..+......++ +.... ... ...+.+. ++|||+|+|++|..+|.+
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~ 292 (339)
T PRK07581 216 ---LWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPE 292 (339)
T ss_pred ---hccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHH
Confidence 000000 00011111111110 01111111111 11000 000 0112233 399999999999999998
Q ss_pred hhhhhcCCCCcccEEEcCC-CCCCCCCCChhhHHHHHHHHHHhc
Q 025026 201 LGRAYGNFDSVEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~-~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
.++.+.+.+|+++++++++ |||++++|+|+.+++.|.+|+++.
T Consensus 293 ~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 293 DCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 8888877788899999999 999999999999999999999874
No 16
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.3e-28 Score=210.48 Aligned_cols=228 Identities=16% Similarity=0.128 Sum_probs=131.3
Q ss_pred c-CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCE-EEEEeCcchHHHHHHHhhCcccccc
Q 025026 3 L-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 3 L-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
| +++||||++|+||||.|.. ..|++.++++|+.+++++++++++ +||||||||+||+.+|.++|++|++
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~~---------~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSLD---------VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cCccccEEEEEeCCCCCCCCC---------CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 5 4789999999999998842 247899999999999999999875 7999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhh-----h--hHHHHH-HHhhcChHHHHHHHHhhcCC-CCCCc---HHH
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-----T--AAGKLF-YKMVATSESVRNILCQCYND-TSQVT---EEL 148 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~ 148 (259)
+|++++........ ..+ ....+........ . .....+ +............+...... ..... ..+
T Consensus 166 LvLi~s~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T PRK08775 166 LVVVSGAHRAHPYA--AAW-RALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDY 242 (343)
T ss_pred EEEECccccCCHHH--HHH-HHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHH
Confidence 99998754311000 000 0000000000000 0 000000 00000111111111000000 00000 111
Q ss_pred HHHHhccccCcchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCC-CCcccEEEcCC-CCCCC
Q 025026 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPN-VGHCP 224 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~-~GH~~ 224 (259)
+...............+..+.... ......+. ++|||+|+|++|..+|.+.+..+.+. .|++++++|++ +||++
T Consensus 243 l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~ 320 (343)
T PRK08775 243 LDAAGAQYVARTPVNAYLRLSESI--DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDA 320 (343)
T ss_pred HHHHHHHHHHhcChhHHHHHHHHH--hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHH
Confidence 110000000000011111111000 00011122 39999999999999998877776654 47899999985 99999
Q ss_pred CCCChhhHHHHHHHHHHhcC
Q 025026 225 QDEAPHLVNPLVESFVTRHA 244 (259)
Q Consensus 225 ~~e~p~~~~~~i~~fl~~~~ 244 (259)
++|+|++|+++|++||++..
T Consensus 321 ~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 321 FLKETDRIDAILTTALRSTG 340 (343)
T ss_pred HhcCHHHHHHHHHHHHHhcc
Confidence 99999999999999997654
No 17
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=2.8e-29 Score=219.83 Aligned_cols=226 Identities=18% Similarity=0.275 Sum_probs=134.1
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN-DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~-~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
++|+|+++|+||||+|+++.. ..|+++++++++. .+++++++++++||||||||+|++.+|.++|++|+++|+
T Consensus 231 ~~yrVia~Dl~G~G~S~~p~~------~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVL 304 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPKPAD------SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTL 304 (481)
T ss_pred CCCEEEEECCCCCCCCcCCCC------CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEE
Confidence 589999999999999987531 4589999999995 899999999999999999999999999999999999999
Q ss_pred eccchhhhhccCCCCCCcchHHHHHHHH-hh--h-----hHHHHHHHhhcC--------hHHHHHHHHhhcCCCCCCcHH
Q 025026 84 LNISLRMLHIKKQPWYGRPLIRSFQNLL-RN--T-----AAGKLFYKMVAT--------SESVRNILCQCYNDTSQVTEE 147 (259)
Q Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 147 (259)
++++....... .......+.... +. . .....++..... .......+...... ......
T Consensus 305 i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 378 (481)
T PLN03087 305 LAPPYYPVPKG-----VQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR-NRMRTF 378 (481)
T ss_pred ECCCccccccc-----hhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh-hhhhHH
Confidence 98643211000 000000000000 00 0 000000000000 00000000000000 000011
Q ss_pred HHHHHhccccCcchHHHHHHHHHhhC---CCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCC
Q 025026 148 LVEKILQPGLETGAADVFLEFICYSG---GPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 222 (259)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH 222 (259)
..+.+.... .......+.++..... .......+. ++|||+|||++|.++|.+.++.+.+..|++++++|+++||
T Consensus 379 l~~~~~~~~-~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH 457 (481)
T PLN03087 379 LIEGFFCHT-HNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDH 457 (481)
T ss_pred HHHHHHhcc-chhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 111110000 0000000000000000 000001111 4999999999999999999988888889999999999999
Q ss_pred CCCC-CChhhHHHHHHHHHHhc
Q 025026 223 CPQD-EAPHLVNPLVESFVTRH 243 (259)
Q Consensus 223 ~~~~-e~p~~~~~~i~~fl~~~ 243 (259)
++++ |+|++|++.|++|++..
T Consensus 458 ~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 458 ITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred cchhhcCHHHHHHHHHHHhhcc
Confidence 9996 99999999999999654
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=4.2e-28 Score=208.35 Aligned_cols=224 Identities=21% Similarity=0.366 Sum_probs=138.0
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+||++|+||||.|+.+... ....|+++++++++.++++++++++++|||||+||+|++.+|.++|++|+++
T Consensus 149 ~L~~~~~Via~DlpG~G~S~~p~~~---~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~l 225 (383)
T PLN03084 149 VLSKNYHAIAFDWLGFGFSDKPQPG---YGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKL 225 (383)
T ss_pred HHhcCCEEEEECCCCCCCCCCCccc---ccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEE
Confidence 3678899999999999999876421 0125899999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|+++++..... ...+ . ....+...+ ... ++...... .....+. .. .....+++....+..+...++.
T Consensus 226 ILi~~~~~~~~-~~~p---~-~l~~~~~~l----~~~-~~~~~~~~-~~~~~~~-~~-~~~~~~~e~~~~~~~~~~~~~~ 292 (383)
T PLN03084 226 ILLNPPLTKEH-AKLP---S-TLSEFSNFL----LGE-IFSQDPLR-ASDKALT-SC-GPYAMKEDDAMVYRRPYLTSGS 292 (383)
T ss_pred EEECCCCcccc-ccch---H-HHHHHHHHH----hhh-hhhcchHH-HHhhhhc-cc-CccCCCHHHHHHHhccccCCcc
Confidence 99997532110 0000 0 000110000 000 01000000 0000000 00 0111223333333222222211
Q ss_pred ----HHHHHHHHHhhCCCCc---cccC----CCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChh
Q 025026 162 ----ADVFLEFICYSGGPLP---EELL----PQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 230 (259)
Q Consensus 162 ----~~~~~~~~~~~~~~~~---~~~~----~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 230 (259)
...+.+.+........ ...+ .++|||+|||++|.+++.+..+.+.+. +++++++|++|||++++|+|+
T Consensus 293 ~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe 371 (383)
T PLN03084 293 SGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGE 371 (383)
T ss_pred hHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHH
Confidence 1111111100000000 0001 148999999999999998877777665 368999999999999999999
Q ss_pred hHHHHHHHHHHh
Q 025026 231 LVNPLVESFVTR 242 (259)
Q Consensus 231 ~~~~~i~~fl~~ 242 (259)
+++++|.+|+++
T Consensus 372 ~v~~~I~~Fl~~ 383 (383)
T PLN03084 372 ELGGIISGILSK 383 (383)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.96 E-value=3.9e-28 Score=200.87 Aligned_cols=225 Identities=20% Similarity=0.197 Sum_probs=136.3
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+.+.. ..|+++++++|+.++++++++++++|+||||||++++.+|.++|++++++
T Consensus 50 ~l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 123 (278)
T TIGR03056 50 PLARSFRVVAPDLPGHGFTRAPFR------FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMV 123 (278)
T ss_pred HHhhCcEEEeecCCCCCCCCCccc------cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceE
Confidence 467789999999999999986531 35899999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhc-ChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcc
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVA-TSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
|++++....... ......+... ................. ........+... ....++.....+........
T Consensus 124 v~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 195 (278)
T TIGR03056 124 VGINAALMPFEG--MAGTLFPYMA---RVLACNPFTPPMMSRGAADQQRVERLIRDT---GSLLDKAGMTYYGRLIRSPA 195 (278)
T ss_pred EEEcCccccccc--ccccccchhh---HhhhhcccchHHHHhhcccCcchhHHhhcc---ccccccchhhHHHHhhcCch
Confidence 999875332110 0000001110 00000000000000000 000011111000 00011111111100000000
Q ss_pred hHHHHHHHH-HhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 161 AADVFLEFI-CYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
......+.. .+..... ...+. ++|+++|+|++|..+|.+.++.+.+..++++++.++++||+++.|+|++++++|.
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 196 HVDGALSMMAQWDLAPL-NRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred hhhHHHHHhhcccccch-hhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHH
Confidence 001111111 0000001 11122 3999999999999999888888877778899999999999999999999999999
Q ss_pred HHHH
Q 025026 238 SFVT 241 (259)
Q Consensus 238 ~fl~ 241 (259)
+|++
T Consensus 275 ~f~~ 278 (278)
T TIGR03056 275 QAAE 278 (278)
T ss_pred HHhC
Confidence 9984
No 20
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=1.8e-27 Score=193.49 Aligned_cols=210 Identities=14% Similarity=0.151 Sum_probs=121.4
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCccc-ccce
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI-CRGM 81 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~l 81 (259)
|+ +|+|+++|+||||.|+++. ..+++++++|+.++++++++++++||||||||.+|+.+|.++|+. |+++
T Consensus 25 l~-~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~l 95 (242)
T PRK11126 25 LP-DYPRLYIDLPGHGGSAAIS--------VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGL 95 (242)
T ss_pred cC-CCCEEEecCCCCCCCCCcc--------ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEE
Confidence 54 6999999999999998753 248999999999999999999999999999999999999999664 9999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHHHHhccccCcc
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLETG 160 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+++++.+..... . .............. .+............+.. .+.. ...+....+.......
T Consensus 96 vl~~~~~~~~~~--------~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~- 160 (242)
T PRK11126 96 IVEGGNPGLQNA--------E--ERQARWQNDRQWAQ-RFRQEPLEQVLADWYQQPVFAS---LNAEQRQQLVAKRSNN- 160 (242)
T ss_pred EEeCCCCCCCCH--------H--HHHHHHhhhHHHHH-HhccCcHHHHHHHHHhcchhhc---cCccHHHHHHHhcccC-
Confidence 998754321100 0 00000000000000 00000000001000000 0000 1111111111000000
Q ss_pred hHHHHHHHHH-h--hCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHH
Q 025026 161 AADVFLEFIC-Y--SGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 235 (259)
Q Consensus 161 ~~~~~~~~~~-~--~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 235 (259)
.......+.. . .......+.+. ++|+++|+|++|..+. ..+.+ ++++++++++|||++++|+|++|++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~ 234 (242)
T PRK11126 161 NGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-ALAQQ-----LALPLHVIPNAGHNAHRENPAAFAAS 234 (242)
T ss_pred CHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-HHHHH-----hcCeEEEeCCCCCchhhhChHHHHHH
Confidence 0001111111 0 01111111223 3999999999998553 22222 25899999999999999999999999
Q ss_pred HHHHHHh
Q 025026 236 VESFVTR 242 (259)
Q Consensus 236 i~~fl~~ 242 (259)
|.+|+++
T Consensus 235 i~~fl~~ 241 (242)
T PRK11126 235 LAQILRL 241 (242)
T ss_pred HHHHHhh
Confidence 9999975
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.95 E-value=4.1e-27 Score=191.98 Aligned_cols=215 Identities=20% Similarity=0.249 Sum_probs=133.4
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
|+++|+|+++|+||||.|+.+. ...|+++++++++.+++++++.++++|+||||||++++.+|.++|++|+++|
T Consensus 36 l~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i 109 (257)
T TIGR03611 36 LTQRFHVVTYDHRGTGRSPGEL------PPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLV 109 (257)
T ss_pred HHhccEEEEEcCCCCCCCCCCC------cccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHhe
Confidence 5678999999999999998643 1458999999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHh----hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccC
Q 025026 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM----VATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (259)
Q Consensus 83 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (259)
++++...... ....... .....+..... ..+... ......+. .. .....+...... .. .
T Consensus 110 ~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~-~~--~ 172 (257)
T TIGR03611 110 LINAWSRPDP-----HTRRCFD-VRIALLQHAGP-EAYVHAQALFLYPADWIS----EN---AARLAADEAHAL-AH--F 172 (257)
T ss_pred eecCCCCCCh-----hHHHHHH-HHHHHHhccCc-chhhhhhhhhhccccHhh----cc---chhhhhhhhhcc-cc--c
Confidence 9986432100 0000000 00000000000 000000 00000000 00 000000000000 00 0
Q ss_pred cchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHH
Q 025026 159 TGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 236 (259)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i 236 (259)
......+..+......... ..+. ++|+++|+|++|.++|.+.+..+.+..++++++.++++||++++|+|++|++.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 251 (257)
T TIGR03611 173 PGKANVLRRINALEAFDVS-ARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRAL 251 (257)
T ss_pred CccHHHHHHHHHHHcCCcH-HHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHH
Confidence 0000011111111111111 1122 399999999999999998888777777788999999999999999999999999
Q ss_pred HHHHH
Q 025026 237 ESFVT 241 (259)
Q Consensus 237 ~~fl~ 241 (259)
.+||+
T Consensus 252 ~~fl~ 256 (257)
T TIGR03611 252 LDFLK 256 (257)
T ss_pred HHHhc
Confidence 99985
No 22
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=4.2e-27 Score=192.10 Aligned_cols=230 Identities=21% Similarity=0.347 Sum_probs=132.5
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|++.++|+++||||+|+|++|.-. ....-.-..+++-|+++..+.++++.+|||||+||++|..||++|||+|++|
T Consensus 112 ~La~~~~vyaiDllG~G~SSRP~F~---~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kL 188 (365)
T KOG4409|consen 112 DLAKIRNVYAIDLLGFGRSSRPKFS---IDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKL 188 (365)
T ss_pred hhhhcCceEEecccCCCCCCCCCCC---CCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceE
Confidence 4788899999999999999997521 1122345688899999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcc---hHHHHH-------H--HHhh-hhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH
Q 025026 82 ILLNISLRMLHIKKQPWYGRP---LIRSFQ-------N--LLRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL 148 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~---~~~~~~-------~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (259)
||+++.....+....+....+ +.+.+. . +++. .+.+..+-+.... +. +. .+ .+...++.
T Consensus 189 iLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~-d~----~~-k~--~~~~~ed~ 260 (365)
T KOG4409|consen 189 ILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRP-DR----FR-KF--PSLIEEDF 260 (365)
T ss_pred EEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhH-HH----HH-hc--cccchhHH
Confidence 999976543322111111111 111100 0 0110 0111111010000 00 00 00 00111222
Q ss_pred H-HHHhccccC-cchHHHHHHHHHhhC---CCCcc--ccCC-CCCeEEEecCCCCCCCchhhhhhcC--CCCcccEEEcC
Q 025026 149 V-EKILQPGLE-TGAADVFLEFICYSG---GPLPE--ELLP-QCPVLIAWGDKDPWEPIELGRAYGN--FDSVEDFIVLP 218 (259)
Q Consensus 149 ~-~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~--~~~~-~~PvliI~G~~D~~~~~~~~~~~~~--~~~~~~~~~i~ 218 (259)
+ +.+..-+.. +.....|-.++...+ .++-. ..+. .|||++|+|+.|.+ ....+..+.+ ....++.++||
T Consensus 261 l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~ 339 (365)
T KOG4409|consen 261 LHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVP 339 (365)
T ss_pred HHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEec
Confidence 1 111111111 112222211111000 11100 1123 39999999999864 4444444333 22347999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHhc
Q 025026 219 NVGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 219 ~~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
++||.+..|+|+.||+++..++++.
T Consensus 340 ~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 340 GAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred CCCceeecCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999998753
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.95 E-value=6.7e-27 Score=188.94 Aligned_cols=213 Identities=19% Similarity=0.260 Sum_probs=127.3
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+.. ..++++++++++.+++ .+++++|||||||.+++.+|.++|++|+++
T Consensus 26 ~l~~~~~vi~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 93 (245)
T TIGR01738 26 ELSAHFTLHLVDLPGHGRSRGF--------GPLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRAL 93 (245)
T ss_pred hhccCeEEEEecCCcCccCCCC--------CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhhee
Confidence 4778899999999999999753 2468888888876643 378999999999999999999999999999
Q ss_pred EEeccchhhhhccCCC-CCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHH-hhcCCCC-CCc-HHHHHHHhcccc
Q 025026 82 ILLNISLRMLHIKKQP-WYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYNDTS-QVT-EELVEKILQPGL 157 (259)
Q Consensus 82 vli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~ 157 (259)
|++++.+......... .........+....... +. ..+..+.. ....... ... ..+...+. ...
T Consensus 94 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 161 (245)
T TIGR01738 94 VTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDD------YQ-----RTIERFLALQTLGTPTARQDARALKQTLL-ARP 161 (245)
T ss_pred eEecCCcccccCCcccccCCHHHHHHHHHHhhhh------HH-----HHHHHHHHHHHhcCCccchHHHHHHHHhh-ccC
Confidence 9998765422111110 00000111111101000 00 00000000 0000000 000 00111111 111
Q ss_pred CcchHHHHHHHHH-hhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHH
Q 025026 158 ETGAADVFLEFIC-YSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 234 (259)
Q Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~ 234 (259)
.+. ...+..... ...... ...+. ++|||+|+|++|.++|.+..+.+.+..|++++++++++||+++.|+|++|++
T Consensus 162 ~~~-~~~~~~~~~~~~~~~~-~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 239 (245)
T TIGR01738 162 TPN-VQVLQAGLEILATVDL-RQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCA 239 (245)
T ss_pred CCC-HHHHHHHHHHhhcccH-HHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHH
Confidence 110 011111111 111111 11122 3999999999999999888877777788899999999999999999999999
Q ss_pred HHHHHH
Q 025026 235 LVESFV 240 (259)
Q Consensus 235 ~i~~fl 240 (259)
.|.+|+
T Consensus 240 ~i~~fi 245 (245)
T TIGR01738 240 LLVAFK 245 (245)
T ss_pred HHHhhC
Confidence 999985
No 24
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=5.8e-27 Score=200.84 Aligned_cols=230 Identities=17% Similarity=0.181 Sum_probs=132.0
Q ss_pred cCCCCeEEEeCCCC--CCCCCCCCCC----CCC-CCCCCCHHHHHHHHHHHHHHhcCCC-EEEEEeCcchHHHHHHHhhC
Q 025026 3 LAKSHRVYSIDLIG--YGYSDKPNPR----DFF-DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 3 L~~~~~via~Dl~G--~G~S~~~~~~----~~~-~~~~y~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~ 74 (259)
++++|+||++|+|| ||.|...... ... ....|+++++++++.++++++++++ ++||||||||+|++.+|.++
T Consensus 69 ~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 69 DTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred CCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 36789999999999 6666432110 000 0125899999999999999999999 99999999999999999999
Q ss_pred cccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhh-------------h---H-HHHHHHh--hcChHHHHHHHH
Q 025026 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-------------A---A-GKLFYKM--VATSESVRNILC 135 (259)
Q Consensus 75 p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~-~~~~~~~--~~~~~~~~~~~~ 135 (259)
|++|+++|++++.+.... + ...+........... + . ....+.. ....+.+...+.
T Consensus 149 p~~v~~lvl~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~ 222 (351)
T TIGR01392 149 PERVRAIVVLATSARHSA-----W-CIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFG 222 (351)
T ss_pred hHhhheEEEEccCCcCCH-----H-HHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhC
Confidence 999999999997643210 0 000000000000000 0 0 0000000 001111111110
Q ss_pred hhcCCC-CC--------CcHHHHH----HHhccccCcchHHHHHHHHHhhCCCCc------cccCC--CCCeEEEecCCC
Q 025026 136 QCYNDT-SQ--------VTEELVE----KILQPGLETGAADVFLEFICYSGGPLP------EELLP--QCPVLIAWGDKD 194 (259)
Q Consensus 136 ~~~~~~-~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~PvliI~G~~D 194 (259)
...... .. ....+.. .+... ..+.......... ...+.. .+.+. ++|||+|+|++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l--~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D 299 (351)
T TIGR01392 223 RAPQSGESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRAL--DTHDLGRGRGSLTEALSRIKAPFLVVSITSD 299 (351)
T ss_pred cCcccccccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHHH--HhcCCcCCCCCHHHHHhhCCCCEEEEEeCCc
Confidence 000000 00 0001110 00000 0011100111111 111110 12233 399999999999
Q ss_pred CCCCchhhhhhcCCCCcccEE-----EcCCCCCCCCCCChhhHHHHHHHHHH
Q 025026 195 PWEPIELGRAYGNFDSVEDFI-----VLPNVGHCPQDEAPHLVNPLVESFVT 241 (259)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-----~i~~~GH~~~~e~p~~~~~~i~~fl~ 241 (259)
.++|.+.++.+.+.+|+++++ ++++|||++++|+|++|++.|.+||+
T Consensus 300 ~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 300 WLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 999999888888777777765 66899999999999999999999984
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.95 E-value=6.3e-27 Score=189.59 Aligned_cols=213 Identities=20% Similarity=0.294 Sum_probs=132.5
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.|+++|+|+++|+||||.|+.+. ..|+++++++|+.++++.++.++++++||||||++++.+|.++|++|+++
T Consensus 35 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~l 107 (251)
T TIGR02427 35 ALTPDFRVLRYDKRGHGLSDAPE-------GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRAL 107 (251)
T ss_pred HhhcccEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHH
Confidence 36678999999999999997542 35799999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCc-HHHHHHHhccccCcc
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT-EELVEKILQPGLETG 160 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 160 (259)
|+++++..... ...+...+..... ..... .. ...+...+...+....... ..+.+.+... .
T Consensus 108 i~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 169 (251)
T TIGR02427 108 VLSNTAAKIGT-------PESWNARIAAVRA-EGLAA-LA-----DAVLERWFTPGFREAHPARLDLYRNMLVRQ----P 169 (251)
T ss_pred hhccCccccCc-------hhhHHHHHhhhhh-ccHHH-HH-----HHHHHHHcccccccCChHHHHHHHHHHHhc----C
Confidence 99886432110 0000000000000 00000 00 0000000000000000000 0011111000 0
Q ss_pred hHHHHHHHH-HhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 161 AADVFLEFI-CYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
...+.... ....... .+.+. ++|+++|+|++|..+|.+....+.+..++.++++++++||++++|+|+++.+.+.
T Consensus 170 -~~~~~~~~~~~~~~~~-~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 170 -PDGYAGCCAAIRDADF-RDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred -HHHHHHHHHHHhcccH-HHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHH
Confidence 00000000 0011111 11122 3999999999999999887777777777889999999999999999999999999
Q ss_pred HHHH
Q 025026 238 SFVT 241 (259)
Q Consensus 238 ~fl~ 241 (259)
+|++
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9974
No 26
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=1.9e-26 Score=199.33 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=132.9
Q ss_pred CCCCeEEEeCCCC-CCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCC-EEEEEeCcchHHHHHHHhhC
Q 025026 4 AKSHRVYSIDLIG-YGYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 4 ~~~~~via~Dl~G-~G~S~~~~~~~~~-------~~~~y~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+++|+||++|+|| ||.|..+...... +...|+++++++++.++++++++++ ++||||||||+|++.+|.++
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC
Confidence 7789999999999 3555433211000 0025899999999999999999999 59999999999999999999
Q ss_pred cccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhh--------------hh-HH----HHHHH-hhcChHHHHHHH
Q 025026 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN--------------TA-AG----KLFYK-MVATSESVRNIL 134 (259)
Q Consensus 75 p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~----~~~~~-~~~~~~~~~~~~ 134 (259)
|++|+++|++++.++..... ..+.+........ .+ .+ +.+.. ...+...+...+
T Consensus 169 p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f 242 (379)
T PRK00175 169 PDRVRSALVIASSARLSAQN------IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKF 242 (379)
T ss_pred hHhhhEEEEECCCcccCHHH------HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhc
Confidence 99999999999765321000 0000000000000 00 00 00000 000111111101
Q ss_pred HhhcCCCC--------CCcHHHHH----HHhccccCcchHHHHHHHHH-hhCCC----CccccCC--CCCeEEEecCCCC
Q 025026 135 CQCYNDTS--------QVTEELVE----KILQPGLETGAADVFLEFIC-YSGGP----LPEELLP--QCPVLIAWGDKDP 195 (259)
Q Consensus 135 ~~~~~~~~--------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~--~~PvliI~G~~D~ 195 (259)
........ .....+.. .+... ..+........... +.... ...+.+. ++|||+|+|++|.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~ 321 (379)
T PRK00175 243 GRELQSGELPFGFDVEFQVESYLRYQGDKFVER-FDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDW 321 (379)
T ss_pred CccccccccccCCCccchHHHHHHHHHHHHhhc-cCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCcc
Confidence 00000000 00000110 00000 01111001011110 00000 0112233 3999999999999
Q ss_pred CCCchhhhhhcCCCCcc----cEEEcC-CCCCCCCCCChhhHHHHHHHHHHhcCC
Q 025026 196 WEPIELGRAYGNFDSVE----DFIVLP-NVGHCPQDEAPHLVNPLVESFVTRHAT 245 (259)
Q Consensus 196 ~~~~~~~~~~~~~~~~~----~~~~i~-~~GH~~~~e~p~~~~~~i~~fl~~~~~ 245 (259)
++|.+.++.+.+.++++ ++++++ +|||++++|+|++|+++|.+||++..+
T Consensus 322 ~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 322 LFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred ccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 99999888877766665 677775 999999999999999999999987643
No 27
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=1.1e-26 Score=198.97 Aligned_cols=219 Identities=17% Similarity=0.251 Sum_probs=129.0
Q ss_pred cC-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC------CEEEEEeCcchHHHHHHHhhCc
Q 025026 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD------QAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 3 L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
|+ .+|+|+++|+||||.|+.+.. ..++++++++|+.++++.+..+ +++|+||||||+||+.+|.++|
T Consensus 111 l~~~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p 184 (349)
T PLN02385 111 IASSGYGVFAMDYPGFGLSEGLHG------YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP 184 (349)
T ss_pred HHhCCCEEEEecCCCCCCCCCCCC------CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc
Confidence 44 479999999999999986421 2358999999999999888643 7999999999999999999999
Q ss_pred ccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhh-hhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 025026 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (259)
Q Consensus 76 ~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (259)
++|+++|++++....... .........+...... .+.. ..+. ........ +.. ........+..
T Consensus 185 ~~v~glVLi~p~~~~~~~----~~~~~~~~~~~~~~~~~~p~~-~~~~---~~~~~~~~----~~~---~~~~~~~~~~~ 249 (349)
T PLN02385 185 NAWDGAILVAPMCKIADD----VVPPPLVLQILILLANLLPKA-KLVP---QKDLAELA----FRD---LKKRKMAEYNV 249 (349)
T ss_pred chhhheeEeccccccccc----ccCchHHHHHHHHHHHHCCCc-eecC---CCcccccc----ccC---HHHHHHhhcCc
Confidence 999999999864321100 0000011111100000 0000 0000 00000000 000 00000000000
Q ss_pred ccc-CcchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCC--CcccEEEcCCCCCCCCCCCh
Q 025026 155 PGL-ETGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQDEAP 229 (259)
Q Consensus 155 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~GH~~~~e~p 229 (259)
... ..........++.... .. ...+. ++|+|+|+|++|.+++.+.++.+.+.. ++.++++++++||++++|+|
T Consensus 250 ~~~~~~~~~~~~~~~l~~~~-~~-~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p 327 (349)
T PLN02385 250 IAYKDKPRLRTAVELLRTTQ-EI-EMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEP 327 (349)
T ss_pred ceeCCCcchHHHHHHHHHHH-HH-HHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCC
Confidence 000 0001111111111000 00 11122 399999999999999998887765543 56799999999999999999
Q ss_pred hh----HHHHHHHHHHhcC
Q 025026 230 HL----VNPLVESFVTRHA 244 (259)
Q Consensus 230 ~~----~~~~i~~fl~~~~ 244 (259)
++ +++.|.+||+++.
T Consensus 328 ~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 328 DEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred hhhHHHHHHHHHHHHHHhc
Confidence 87 7888999998754
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.94 E-value=2.5e-26 Score=183.13 Aligned_cols=206 Identities=22% Similarity=0.357 Sum_probs=126.7
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
|+++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++|+|||+||.+++.++.++|++|+++|
T Consensus 21 l~~~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 95 (228)
T PF12697_consen 21 LARGYRVIAFDLPGHGRSDPPPD-----YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLV 95 (228)
T ss_dssp HHTTSEEEEEECTTSTTSSSHSS-----GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HhCCCEEEEEecCCccccccccc-----cCCcchhhhhhhhhhcccccccccccccccccccccccccccccccccccce
Confidence 56789999999999999987531 1357999999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCCcchHHHHHHH-Hhh-hhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcc
Q 025026 83 LLNISLRMLHIKKQPWYGRPLIRSFQNL-LRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (259)
Q Consensus 83 li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
++++......... ......+...+... ... .......+............... ..+.+.+.+...
T Consensus 96 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----- 162 (228)
T PF12697_consen 96 LLSPPPPLPDSPS-RSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRS-------SRRALAEYLRSN----- 162 (228)
T ss_dssp EESESSSHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH-------HHHHHHHHHHHH-----
T ss_pred eeccccccccccc-ccccchhhhhhhhccccccccccccccccccccccccccccc-------cccccccccccc-----
Confidence 9997643211000 00000011100000 000 00000000000000000000000 000000000000
Q ss_pred hHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHH
Q 025026 161 AADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 235 (259)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 235 (259)
........ ... ..++|+++|+|++|.+++.+..+.+.+..+++++++++++||++++|+|++|+++
T Consensus 163 ---~~~~~~~~-----~~~-~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 163 ---LWQADLSE-----ALP-RIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp ---HHHHHHHH-----HHH-GSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ---cccccccc-----ccc-ccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 00000000 000 1249999999999999997777777766678999999999999999999999874
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.93 E-value=9.6e-25 Score=176.44 Aligned_cols=223 Identities=20% Similarity=0.254 Sum_probs=129.3
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~d-l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
.|+++|+|+++|+||||.|+.+.. ...+++++++++ +..+++.++.++++++|||+||.+++.+|.++|++|++
T Consensus 23 ~L~~~~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~ 97 (251)
T TIGR03695 23 LLGPHFRCLAIDLPGHGSSQSPDE-----IERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQG 97 (251)
T ss_pred HhcccCeEEEEcCCCCCCCCCCCc-----cChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheee
Confidence 366789999999999999976531 235789999999 77888888889999999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHHHHhccccC-
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLE- 158 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~- 158 (259)
++++++.+.............. ...+...+.... ........... .+......+++....+......
T Consensus 98 lil~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (251)
T TIGR03695 98 LILESGSPGLATEEERAARRQN-DEQLAQRFEQEG----------LEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN 166 (251)
T ss_pred eEEecCCCCcCchHhhhhhhhc-chhhhhHHHhcC----------ccHHHHHHhcCceeeecccCChHHhHHHHHhcccc
Confidence 9999865321100000000000 000000000000 00000000000 0000000111111111110000
Q ss_pred -cchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHH
Q 025026 159 -TGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 235 (259)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 235 (259)
+.....................+. ++|+++|+|++|..++ +..+.+.+..++++++.+|++||++++|+|+++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~ 245 (251)
T TIGR03695 167 NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKI 245 (251)
T ss_pred cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHH
Confidence 000000000000000000111122 3999999999998664 455566666778999999999999999999999999
Q ss_pred HHHHHH
Q 025026 236 VESFVT 241 (259)
Q Consensus 236 i~~fl~ 241 (259)
|.+|++
T Consensus 246 i~~~l~ 251 (251)
T TIGR03695 246 LLAFLE 251 (251)
T ss_pred HHHHhC
Confidence 999983
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=1.1e-24 Score=189.25 Aligned_cols=240 Identities=18% Similarity=0.231 Sum_probs=126.7
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
|+++|+|+++|+||||.|+++... . .......+.+++++.++++.+++++++|+||||||++|+.+|.++|++|+++|
T Consensus 128 L~~~~~vi~~D~rG~G~S~~~~~~-~-~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lv 205 (402)
T PLN02894 128 LASRFRVIAIDQLGWGGSSRPDFT-C-KSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLI 205 (402)
T ss_pred HHhCCEEEEECCCCCCCCCCCCcc-c-ccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 667899999999999999875310 0 00001123467788899999999999999999999999999999999999999
Q ss_pred EeccchhhhhccCC-CCCCc--c-hHHHHHHHHhhhhH-HHHHHHhhc--ChHHHHHHHHhhcC---CCCCCc----HHH
Q 025026 83 LLNISLRMLHIKKQ-PWYGR--P-LIRSFQNLLRNTAA-GKLFYKMVA--TSESVRNILCQCYN---DTSQVT----EEL 148 (259)
Q Consensus 83 li~~~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~----~~~ 148 (259)
++++.......... .+... . +...+......... ......... .+..+.......+. .....+ ..+
T Consensus 206 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (402)
T PLN02894 206 LVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLL 285 (402)
T ss_pred EECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHH
Confidence 99865332111000 00000 0 00000000000000 000000000 00001111100010 000011 111
Q ss_pred HHHHhccccCcchHHHHHHHHHh----hCCCCccccCC--CCCeEEEecCCCCCCCchhhhhh-cCCCCcccEEEcCCCC
Q 025026 149 VEKILQPGLETGAADVFLEFICY----SGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVG 221 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~-~~~~~~~~~~~i~~~G 221 (259)
.+.+...............+... ...+. ...+. ++||++|+|++|.+.+ .....+ ....+.+++++|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aG 363 (402)
T PLN02894 286 TDYVYHTLAAKASGELCLKYIFSFGAFARKPL-LESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGG 363 (402)
T ss_pred HHHHHHhhcCCCchHHHHHHhccCchhhcchH-hhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCC
Confidence 11111111111111111111100 01111 11123 3999999999998765 433333 3333457899999999
Q ss_pred CCCCCCChhhHHHHHHHHHHhcCCC
Q 025026 222 HCPQDEAPHLVNPLVESFVTRHATP 246 (259)
Q Consensus 222 H~~~~e~p~~~~~~i~~fl~~~~~~ 246 (259)
|++++|+|++|++++.+|++.....
T Consensus 364 H~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 364 HFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred CeeeccCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999876543
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.93 E-value=4.5e-25 Score=182.55 Aligned_cols=223 Identities=17% Similarity=0.288 Sum_probs=126.7
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEec
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~ 85 (259)
+|+|+++|+||||.|..+... ...|+++++++|+.+++++++.++++|+||||||++++.+|.++|++|+++|+++
T Consensus 53 g~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (288)
T TIGR01250 53 GREVIMYDQLGCGYSDQPDDS----DELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISS 128 (288)
T ss_pred CCEEEEEcCCCCCCCCCCCcc----cccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEec
Confidence 699999999999999865311 1148999999999999999999999999999999999999999999999999987
Q ss_pred cchhhhhccCC-----CCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcc
Q 025026 86 ISLRMLHIKKQ-----PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (259)
Q Consensus 86 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+.......... ..........+........ +........+......... .....++........ ....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 201 (288)
T TIGR01250 129 MLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGD-----YDNPEYQEAVEVFYHHLLC-RTRKWPEALKHLKSG-MNTN 201 (288)
T ss_pred ccccchHHHHHHHHHHhhcChhHHHHHHHHHhccC-----cchHHHHHHHHHHHHHhhc-ccccchHHHHHHhhc-cCHH
Confidence 64321100000 0000000000000000000 0000000000000000000 000011111111000 0000
Q ss_pred hHHHHH---HHH---HhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhH
Q 025026 161 AADVFL---EFI---CYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 232 (259)
Q Consensus 161 ~~~~~~---~~~---~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~ 232 (259)
....+. .+. ....... .+.+. ++|+++++|++|.+ +.+....+.+..+++++++++++||+++.|+|++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 279 (288)
T TIGR01250 202 VYNIMQGPNEFTITGNLKDWDI-TDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVY 279 (288)
T ss_pred HHhcccCCccccccccccccCH-HHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHH
Confidence 000000 000 0000000 11122 39999999999985 45666667776778899999999999999999999
Q ss_pred HHHHHHHHH
Q 025026 233 NPLVESFVT 241 (259)
Q Consensus 233 ~~~i~~fl~ 241 (259)
++.|.+|++
T Consensus 280 ~~~i~~fl~ 288 (288)
T TIGR01250 280 FKLLSDFIR 288 (288)
T ss_pred HHHHHHHhC
Confidence 999999984
No 32
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.92 E-value=6.7e-26 Score=182.07 Aligned_cols=217 Identities=20% Similarity=0.264 Sum_probs=126.3
Q ss_pred CeEEEeCCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 7 HRVYSIDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~---~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
|+|+++|+||+|.|++ .. ...|+..++++++..++++++++++++|||||||++++.+|.++|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD------FPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG------SCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC------cccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7899999999999984 22 25689999999999999999999999999999999999999999999999999
Q ss_pred eccch--hhhhccCCCCCCc-chHHHHHHHHhh--hhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccC
Q 025026 84 LNISL--RMLHIKKQPWYGR-PLIRSFQNLLRN--TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (259)
Q Consensus 84 i~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (259)
+++.. ..... ...... .....+...... ............ .. .......... ..........+.....
T Consensus 75 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~- 147 (230)
T PF00561_consen 75 ISPPPDLPDGLW--NRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWP--KQ-FFAYDREFVE-DFLKQFQSQQYARFAE- 147 (230)
T ss_dssp ESESSHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHH-THHHHHHHHHHHHTCH-
T ss_pred Eeeeccchhhhh--HHHHhhhhhhhhHHHhhhccccccchhhhhhhh--hh-eeeccCcccc-chhhccchhhhhHHHH-
Confidence 98741 11000 000000 000000000000 000000000000 00 0000000000 0000000000100000
Q ss_pred cchHHHHHH--HHHhhCCCCccccC--CCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHH
Q 025026 159 TGAADVFLE--FICYSGGPLPEELL--PQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 234 (259)
Q Consensus 159 ~~~~~~~~~--~~~~~~~~~~~~~~--~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~ 234 (259)
......... .......+. ...+ .++|+|+|+|++|.++|.+....+.+..|++++++++++||+.+++.|+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 148 TDAFDNMFWNALGYFSVWDP-SPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHH
T ss_pred HHHHhhhccccccccccccc-cccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhh
Confidence 000000000 000000000 0111 24999999999999999998888888888899999999999999999999999
Q ss_pred HHH
Q 025026 235 LVE 237 (259)
Q Consensus 235 ~i~ 237 (259)
+|.
T Consensus 227 ~i~ 229 (230)
T PF00561_consen 227 III 229 (230)
T ss_dssp HHH
T ss_pred hhc
Confidence 885
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.92 E-value=3e-24 Score=185.26 Aligned_cols=210 Identities=26% Similarity=0.347 Sum_probs=127.7
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
|.+.|+|+++|+||||.|.... ..++++++++++.++++.++.++++|+|||+||.+++.+|.++|++|.++|
T Consensus 154 l~~~~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv 226 (371)
T PRK14875 154 LAAGRPVIALDLPGHGASSKAV-------GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLT 226 (371)
T ss_pred HhcCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEE
Confidence 5667999999999999996532 346899999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchH
Q 025026 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (259)
Q Consensus 83 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
++++....... ...+...+........... . +...+.............+..........
T Consensus 227 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
T PRK14875 227 LIAPAGLGPEI------NGDYIDGFVAAESRRELKP-V-------------LELLFADPALVTRQMVEDLLKYKRLDGVD 286 (371)
T ss_pred EECcCCcCccc------chhHHHHhhcccchhHHHH-H-------------HHHHhcChhhCCHHHHHHHHHHhccccHH
Confidence 99864321100 0000000000000000000 0 00000000111111111111100000000
Q ss_pred HHHHHHHHh--hCC---CCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHH
Q 025026 163 DVFLEFICY--SGG---PLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 235 (259)
Q Consensus 163 ~~~~~~~~~--~~~---~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 235 (259)
..+..+... ... ......+. ++|+|+|+|++|..+|.+.++.+ .++.++++++++||++++|+|++|++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~ 363 (371)
T PRK14875 287 DALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRL 363 (371)
T ss_pred HHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHH
Confidence 011100000 000 00001122 39999999999999987765543 345799999999999999999999999
Q ss_pred HHHHHHh
Q 025026 236 VESFVTR 242 (259)
Q Consensus 236 i~~fl~~ 242 (259)
|.+|+++
T Consensus 364 i~~fl~~ 370 (371)
T PRK14875 364 LAEFLGK 370 (371)
T ss_pred HHHHhcc
Confidence 9999975
No 34
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=1.3e-24 Score=184.88 Aligned_cols=220 Identities=19% Similarity=0.277 Sum_probs=126.7
Q ss_pred cC-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCEEEEEeCcchHHHHHHHhhCc
Q 025026 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 3 L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
|+ .+|+|+++|+||||+|+.+.. ...+++.+++|+.++++.+.. .+++|+||||||++++.++.++|
T Consensus 83 L~~~Gy~V~~~D~rGhG~S~~~~~------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p 156 (330)
T PLN02298 83 LAQMGFACFALDLEGHGRSEGLRA------YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP 156 (330)
T ss_pred HHhCCCEEEEecCCCCCCCCCccc------cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc
Confidence 44 469999999999999975321 235799999999999998864 36999999999999999999999
Q ss_pred ccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCc-HHHHHHHhc
Q 025026 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT-EELVEKILQ 154 (259)
Q Consensus 76 ~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 154 (259)
++|+++|++++...........+ . ...+..... .++........ ...+ ....... ...... ..
T Consensus 157 ~~v~~lvl~~~~~~~~~~~~~~~---~-~~~~~~~~~------~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~-~~ 220 (330)
T PLN02298 157 EGFDGAVLVAPMCKISDKIRPPW---P-IPQILTFVA------RFLPTLAIVPT-ADLL----EKSVKVPAKKIIAK-RN 220 (330)
T ss_pred ccceeEEEecccccCCcccCCch---H-HHHHHHHHH------HHCCCCccccC-CCcc----cccccCHHHHHHHH-hC
Confidence 99999999986432110000000 0 000000000 00000000000 0000 0000000 000000 00
Q ss_pred cc-cC-cchHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCC--CcccEEEcCCCCCCCCCCC
Q 025026 155 PG-LE-TGAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQDEA 228 (259)
Q Consensus 155 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~GH~~~~e~ 228 (259)
+. .. ......+..+..... .. ...+. ++|+|+|+|++|.++|.+.++.+.+.. ++.++++++++||+++.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~ 298 (330)
T PLN02298 221 PMRYNGKPRLGTVVELLRVTD-YL-GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGE 298 (330)
T ss_pred ccccCCCccHHHHHHHHHHHH-HH-HHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCC
Confidence 00 00 000000111111000 00 11122 399999999999999999887764432 4689999999999999999
Q ss_pred hhh----HHHHHHHHHHhcCCC
Q 025026 229 PHL----VNPLVESFVTRHATP 246 (259)
Q Consensus 229 p~~----~~~~i~~fl~~~~~~ 246 (259)
|+. +.+.+.+||.+...+
T Consensus 299 pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 299 PDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CHHHHHHHHHHHHHHHHHhccC
Confidence 864 667788899876543
No 35
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=3.8e-24 Score=177.13 Aligned_cols=213 Identities=19% Similarity=0.185 Sum_probs=128.8
Q ss_pred cC-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 3 L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
|+ .+|+|+++|+||||.|..+. ...++++++++++.++++++. .++++||||||||++++.++.++|++|++
T Consensus 41 L~~~g~~vi~~dl~g~G~s~~~~------~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~ 114 (273)
T PLN02211 41 MENSGYKVTCIDLKSAGIDQSDA------DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICL 114 (273)
T ss_pred HHhCCCEEEEecccCCCCCCCCc------ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeE
Confidence 54 47999999999999985432 134799999999999999985 58999999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHH---------hhcChHHHHHHHHhhcCCCCCCcHHH---
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK---------MVATSESVRNILCQCYNDTSQVTEEL--- 148 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--- 148 (259)
+|++++........ ........+.............+. .....+....++ +.. .+++.
T Consensus 115 lv~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~ 184 (273)
T PLN02211 115 AVYVAATMLKLGFQ----TDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL---YQM---SPQEDSTL 184 (273)
T ss_pred EEEeccccCCCCCC----HHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHH---hcC---CCHHHHHH
Confidence 99997643211000 000000000000000000000000 000001011111 111 11111
Q ss_pred HHHHhccccCcchHHHHHHHHHhhCCCCcc--ccCCCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCC
Q 025026 149 VEKILQPGLETGAADVFLEFICYSGGPLPE--ELLPQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 226 (259)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 226 (259)
...+..+. ....+. ...... ....++|+++|+|++|..+|++..+.+.+..+.++++.++ +||.+++
T Consensus 185 ~~~~~~~~----~~~~~~------~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~l 253 (273)
T PLN02211 185 AAMLLRPG----PILALR------SARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFF 253 (273)
T ss_pred HHHhcCCc----Cccccc------cccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccc
Confidence 11111110 000000 000000 1122589999999999999999888888777778999996 8999999
Q ss_pred CChhhHHHHHHHHHHh
Q 025026 227 EAPHLVNPLVESFVTR 242 (259)
Q Consensus 227 e~p~~~~~~i~~fl~~ 242 (259)
++|++|.++|.++...
T Consensus 254 s~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 254 STPFLLFGLLIKAAAS 269 (273)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 9999999999988754
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=99.92 E-value=8.1e-25 Score=186.04 Aligned_cols=228 Identities=14% Similarity=0.093 Sum_probs=125.8
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
+.+|+|+++|+||||.|+++..... ....++++++++|+.++++++ +..+++|+||||||+|++.+|.++|++|+
T Consensus 79 ~~g~~v~~~D~~G~G~S~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~ 157 (330)
T PRK10749 79 HLGYDVLIIDHRGQGRSGRLLDDPH-RGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFD 157 (330)
T ss_pred HCCCeEEEEcCCCCCCCCCCCCCCC-cCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcc
Confidence 4679999999999999986431100 012368999999999999887 56799999999999999999999999999
Q ss_pred ceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHH----HHHHHhc-
Q 025026 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEE----LVEKILQ- 154 (259)
Q Consensus 80 ~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 154 (259)
++|++++...... . .+ ......+.............+...... ... . ......-...++ ..+.+..
T Consensus 158 ~lvl~~p~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~l~~~~~~~~~~~~~~~~~ 228 (330)
T PRK10749 158 AIALCAPMFGIVL-P-LP---SWMARRILNWAEGHPRIRDGYAIGTGR-WRP--L-PFAINVLTHSRERYRRNLRFYADD 228 (330)
T ss_pred eEEEECchhccCC-C-CC---cHHHHHHHHHHHHhcCCCCcCCCCCCC-CCC--C-CcCCCCCCCCHHHHHHHHHHHHhC
Confidence 9999976432110 0 00 000100100000000000000000000 000 0 000000000011 1111111
Q ss_pred cccCc--chHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCC-------CcccEEEcCCCCCC
Q 025026 155 PGLET--GAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFD-------SVEDFIVLPNVGHC 223 (259)
Q Consensus 155 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~-------~~~~~~~i~~~GH~ 223 (259)
+.... .....+........ .. ...+. ++|+|+|+|++|.+++.+.++.+.+.. ++++++++|||||.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~ 306 (330)
T PRK10749 229 PELRVGGPTYHWVRESILAGE-QV-LAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHE 306 (330)
T ss_pred CCcccCCCcHHHHHHHHHHHH-HH-HhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcch
Confidence 10000 00000011100000 00 01122 399999999999999988776554322 34689999999999
Q ss_pred CCCCCh---hhHHHHHHHHHHhc
Q 025026 224 PQDEAP---HLVNPLVESFVTRH 243 (259)
Q Consensus 224 ~~~e~p---~~~~~~i~~fl~~~ 243 (259)
++.|.+ +.+.+.|.+|++++
T Consensus 307 ~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 307 ILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhhCCcHHHHHHHHHHHHHHhhc
Confidence 999987 56778888898764
No 37
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.92 E-value=3.6e-24 Score=211.82 Aligned_cols=229 Identities=19% Similarity=0.202 Sum_probs=130.5
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~-~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
.|+++|+|+++|+||||.|+.+... .......|+++.+++++.+++++++.++++||||||||+||+.+|.++|++|++
T Consensus 1393 ~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~ 1472 (1655)
T PLN02980 1393 AISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEG 1472 (1655)
T ss_pred HHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCE
Confidence 3677899999999999999764210 000113589999999999999999999999999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcc
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+|++++.+........ .............+..... ..+........ .. ... ...+.+...+... ....
T Consensus 1473 lVlis~~p~~~~~~~~-~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~-~~----~~~----~~~~~~~~~~~~~-~~~~ 1540 (1655)
T PLN02980 1473 AVIISGSPGLKDEVAR-KIRSAKDDSRARMLIDHGL-EIFLENWYSGE-LW----KSL----RNHPHFNKIVASR-LLHK 1540 (1655)
T ss_pred EEEECCCCccCchHHH-HHHhhhhhHHHHHHHhhhH-HHHHHHhccHH-Hh----hhh----ccCHHHHHHHHHH-HhcC
Confidence 9999865321100000 0000000000000000000 00000000000 00 000 0011111111000 0000
Q ss_pred hHHHHHHHH-Hhh---CCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCc------------ccEEEcCCCCC
Q 025026 161 AADVFLEFI-CYS---GGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSV------------EDFIVLPNVGH 222 (259)
Q Consensus 161 ~~~~~~~~~-~~~---~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~------------~~~~~i~~~GH 222 (259)
....+.... ... ..+. .+.+. ++|+|+|+|++|..++ +.+..+.+.+++ +++++||+|||
T Consensus 1541 ~~~~~~~~l~~~~~~~~~dl-~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH 1618 (1655)
T PLN02980 1541 DVPSLAKLLSDLSIGRQPSL-WEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGH 1618 (1655)
T ss_pred CHHHHHHHHHHhhhcccchH-HHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCC
Confidence 011111110 000 0111 12233 3999999999999775 444444433332 58999999999
Q ss_pred CCCCCChhhHHHHHHHHHHhcC
Q 025026 223 CPQDEAPHLVNPLVESFVTRHA 244 (259)
Q Consensus 223 ~~~~e~p~~~~~~i~~fl~~~~ 244 (259)
++++|+|++|+++|.+||++..
T Consensus 1619 ~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1619 AVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred chHHHCHHHHHHHHHHHHHhcc
Confidence 9999999999999999998754
No 38
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=4e-24 Score=177.31 Aligned_cols=209 Identities=18% Similarity=0.278 Sum_probs=122.9
Q ss_pred cCC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCccc
Q 025026 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 3 L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
|++ +|+|+++|+||||.|+.... ...++.++++|+.+.++.+ ..++++|+||||||+||+.+|.++|++
T Consensus 48 l~~~g~~via~D~~G~G~S~~~~~------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~ 121 (276)
T PHA02857 48 ISSLGILVFSHDHIGHGRSNGEKM------MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNL 121 (276)
T ss_pred HHhCCCEEEEccCCCCCCCCCccC------CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccc
Confidence 444 69999999999999975310 1236777788888777665 245899999999999999999999999
Q ss_pred ccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhc----ChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 025026 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVA----TSESVRNILCQCYNDTSQVTEELVEKIL 153 (259)
Q Consensus 78 v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (259)
|+++|++++.... .. ......+...... .++.... ....+ .....+......
T Consensus 122 i~~lil~~p~~~~---~~-----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 177 (276)
T PHA02857 122 FTAMILMSPLVNA---EA-----VPRLNLLAAKLMG-----IFYPNKIVGKLCPESV-----------SRDMDEVYKYQY 177 (276)
T ss_pred cceEEEecccccc---cc-----ccHHHHHHHHHHH-----HhCCCCccCCCCHhhc-----------cCCHHHHHHHhc
Confidence 9999999864321 00 0011111100000 0000000 00000 000000000001
Q ss_pred ccccCc--chHHHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCC-CCcccEEEcCCCCCCCCCCC
Q 025026 154 QPGLET--GAADVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEA 228 (259)
Q Consensus 154 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~GH~~~~e~ 228 (259)
.+.... .............. .. ...+. ++|||+|+|++|.++|.+.+..+.+. .+++++++++++||+++.|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~ 255 (276)
T PHA02857 178 DPLVNHEKIKAGFASQVLKATN-KV-RKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKET 255 (276)
T ss_pred CCCccCCCccHHHHHHHHHHHH-HH-HHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCc
Confidence 110000 00000000000000 00 11122 39999999999999999988776554 34689999999999999998
Q ss_pred h---hhHHHHHHHHHHhc
Q 025026 229 P---HLVNPLVESFVTRH 243 (259)
Q Consensus 229 p---~~~~~~i~~fl~~~ 243 (259)
| +++.+.+.+||++.
T Consensus 256 ~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 256 DEVKKSVMKEIETWIFNR 273 (276)
T ss_pred hhHHHHHHHHHHHHHHHh
Confidence 7 46888888999874
No 39
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=1e-23 Score=181.60 Aligned_cols=229 Identities=16% Similarity=0.136 Sum_probs=133.0
Q ss_pred CCCeEEEeCCCCCCCCCCC-------CCCCC------C-CCCCCCHHHHHHHHHHHHHHhcCCCEE-EEEeCcchHHHHH
Q 025026 5 KSHRVYSIDLIGYGYSDKP-------NPRDF------F-DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQ 69 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~-------~~~~~------~-~~~~y~~~~~a~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~ 69 (259)
++|.||++|..|-|.|..| ....+ . +...|++.++++++.++++++++++++ ||||||||++|+.
T Consensus 98 ~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~ 177 (389)
T PRK06765 98 NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQE 177 (389)
T ss_pred CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHH
Confidence 5799999999998764322 10000 0 112489999999999999999999987 9999999999999
Q ss_pred HHhhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhh-------------h-HHHHHH-----HhhcChHHH
Q 025026 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-------------A-AGKLFY-----KMVATSESV 130 (259)
Q Consensus 70 ~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~-----~~~~~~~~~ 130 (259)
+|.++|++|+++|+++++++.. ++....+.+.....+... + .+-..+ ....+.+.+
T Consensus 178 ~a~~~P~~v~~lv~ia~~~~~~-----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~ 252 (389)
T PRK06765 178 WAVHYPHMVERMIGVIGNPQND-----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFY 252 (389)
T ss_pred HHHHChHhhheEEEEecCCCCC-----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999998764421 000000111111100000 0 000000 000111111
Q ss_pred HHHHHhhcCCCC------------CCc-HHHHHHHhccccCcchHHHHHHHH-HhhCCCC------ccccCC--CCCeEE
Q 025026 131 RNILCQCYNDTS------------QVT-EELVEKILQPGLETGAADVFLEFI-CYSGGPL------PEELLP--QCPVLI 188 (259)
Q Consensus 131 ~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~--~~Pvli 188 (259)
. +.+.+.. ... +.+++...+.....-....++.+. .....+. ..+.+. ++|||+
T Consensus 253 ~----~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLv 328 (389)
T PRK06765 253 E----TTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLM 328 (389)
T ss_pred H----HHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEE
Confidence 1 1111100 000 112222111111111111111111 1111110 111222 399999
Q ss_pred EecCCCCCCCchhhhhhcCCCC----cccEEEcCC-CCCCCCCCChhhHHHHHHHHHHh
Q 025026 189 AWGDKDPWEPIELGRAYGNFDS----VEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 189 I~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~-~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
|+|++|.++|.+.++.+.+..+ ++++++|++ +||++++|+|++|++.|.+|+++
T Consensus 329 I~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 329 IPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9999999999888777666553 689999986 99999999999999999999975
No 40
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.91 E-value=7.6e-24 Score=159.88 Aligned_cols=203 Identities=24% Similarity=0.274 Sum_probs=136.5
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEecc
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 86 (259)
++|+++|.||||.|.+|. +.+. ..+ +..=+++...++++|..+++.++|||-||..|+..|+++++.|.++|++++
T Consensus 72 ~TivawDPpGYG~SrPP~-Rkf~--~~f-f~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga 147 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTSRPPE-RKFE--VQF-FMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGA 147 (277)
T ss_pred eEEEEECCCCCCCCCCCc-ccch--HHH-HHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecc
Confidence 899999999999997664 2211 112 223356777889999999999999999999999999999999999999986
Q ss_pred chhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHHHH
Q 025026 87 SLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166 (259)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (259)
.....+. .....+.++. ... +.. ..++.+...|+ .|.+...+. .+.+..-
T Consensus 148 ~ayvn~~------~~ma~kgiRd------v~k----Ws~---r~R~P~e~~Yg------~e~f~~~wa-----~wvD~v~ 197 (277)
T KOG2984|consen 148 AAYVNHL------GAMAFKGIRD------VNK----WSA---RGRQPYEDHYG------PETFRTQWA-----AWVDVVD 197 (277)
T ss_pred cceecch------hHHHHhchHH------Hhh----hhh---hhcchHHHhcC------HHHHHHHHH-----HHHHHHH
Confidence 5432110 0001111111 000 000 00111111111 111111111 1334444
Q ss_pred HHHHhhCCCCccccCCC--CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 025026 167 EFICYSGGPLPEELLPQ--CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 167 ~~~~~~~~~~~~~~~~~--~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
++..+..+++++-.+++ ||+||++|+.|++++.....-+....+.++++++|+++|..|+..+++||..+.+|++++
T Consensus 198 qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 198 QFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred HHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 44445555666655655 999999999999998777666777778899999999999999999999999999999875
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.90 E-value=7.4e-23 Score=172.31 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=70.5
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
+++|+||++|+||||.|+.+.. ...+++.++++|+..++++++++++++|||||||++++.++.++|++|+++|+
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl 125 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPHAC-----LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVL 125 (306)
T ss_pred ccCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhhee
Confidence 3579999999999999986431 12468899999999999999999999999999999999999999999999999
Q ss_pred eccch
Q 025026 84 LNISL 88 (259)
Q Consensus 84 i~~~~ 88 (259)
++...
T Consensus 126 ~~~~~ 130 (306)
T TIGR01249 126 RGIFL 130 (306)
T ss_pred ecccc
Confidence 98643
No 42
>PLN02511 hydrolase
Probab=99.90 E-value=1e-22 Score=176.43 Aligned_cols=222 Identities=16% Similarity=0.227 Sum_probs=124.1
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCEEEEEeCcchHHHHHHHhhCccc-
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEI- 77 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~- 77 (259)
++++|+|+++|+||||.|+...+ ..| ...+++|+.+++++++. .++++|||||||+|++.++.++|++
T Consensus 126 ~~~g~~vv~~d~rG~G~s~~~~~------~~~-~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~ 198 (388)
T PLN02511 126 RSKGWRVVVFNSRGCADSPVTTP------QFY-SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC 198 (388)
T ss_pred HHCCCEEEEEecCCCCCCCCCCc------CEE-cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC
Confidence 46789999999999999975432 222 35667889899888875 5899999999999999999999998
Q ss_pred -ccceEEeccchhhhhccC--CCCCCcchHHHHHHHHhhhhH-HHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 025026 78 -CRGMILLNISLRMLHIKK--QPWYGRPLIRSFQNLLRNTAA-GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (259)
Q Consensus 78 -v~~lvli~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (259)
|.++++++.+........ .......+...+...++.... ....+..+...-.... .. ......++-+.+.
T Consensus 199 ~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~fd~~~t 272 (388)
T PLN02511 199 PLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPL-VA-----NAKTVRDFDDGLT 272 (388)
T ss_pred CceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHH-HH-----hCCCHHHHHHhhh
Confidence 888888875432100000 000000000000000000000 0000000000000000 00 0000111111111
Q ss_pred ccccCcchHHHHHHHHHhhCCCCccccCCC--CCeEEEecCCCCCCCchhh-hhhcCCCCcccEEEcCCCCCCCCCCChh
Q 025026 154 QPGLETGAADVFLEFICYSGGPLPEELLPQ--CPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPH 230 (259)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~PvliI~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 230 (259)
.+.......+.+.. ... ....+.+ +|+|+|+|++|+++|.+.. ....+..|++++++++++||++++|+|+
T Consensus 273 ~~~~gf~~~~~yy~-----~~s-~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~ 346 (388)
T PLN02511 273 RVSFGFKSVDAYYS-----NSS-SSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPE 346 (388)
T ss_pred hhcCCCCCHHHHHH-----HcC-chhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCC
Confidence 11111011111110 000 1122333 9999999999999987754 3345567889999999999999999998
Q ss_pred h------HHHHHHHHHHhc
Q 025026 231 L------VNPLVESFVTRH 243 (259)
Q Consensus 231 ~------~~~~i~~fl~~~ 243 (259)
. +++.+.+|++..
T Consensus 347 ~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 347 APFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred CCCCCccHHHHHHHHHHHH
Confidence 6 589999999754
No 43
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=1.5e-22 Score=165.05 Aligned_cols=218 Identities=20% Similarity=0.179 Sum_probs=135.3
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCEEEEEeCcch-HHHHHHHhhCcccccce
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGG-LVGLQAAVMEPEICRGM 81 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg-~ia~~~a~~~p~~v~~l 81 (259)
..||+.|+|.||.|... ..++...+++|+..|++..+ ..++.++|||||| .+++..+..+|+.+.++
T Consensus 81 ~~v~~vd~RnHG~Sp~~--------~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rl 152 (315)
T KOG2382|consen 81 RDVYAVDVRNHGSSPKI--------TVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERL 152 (315)
T ss_pred CceEEEecccCCCCccc--------cccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCccccee
Confidence 58999999999999764 34679999999999999985 4589999999999 78888889999999999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhh---hHHHHHHHh---hcChHHHHHHHHhhcCCCCCCcHHHHHHHhcc
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT---AAGKLFYKM---VATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (259)
|+++.++...... ..-...+++.+...-... .......+. +..+..+.+++..++.. ......+.
T Consensus 153 iv~D~sP~~~~~~--~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~-~~~~~s~~------ 223 (315)
T KOG2382|consen 153 IVEDISPGGVGRS--YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKK-SPSDGSFL------ 223 (315)
T ss_pred EEEecCCccCCcc--cchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCc-CCCCCceE------
Confidence 9999776421100 000011122221111110 000001111 11111222222222211 00000000
Q ss_pred ccCcchHHHHHHHHHh--h-CCCCccccCCC-CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhh
Q 025026 156 GLETGAADVFLEFICY--S-GGPLPEELLPQ-CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 231 (259)
Q Consensus 156 ~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~-~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~ 231 (259)
....++.+.+++.. . ......+.... .|||+|.|.++.+++.+.-.++.++.|+++++.++++|||+|.|+|++
T Consensus 224 --w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~ 301 (315)
T KOG2382|consen 224 --WRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEE 301 (315)
T ss_pred --EEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHH
Confidence 00112222222111 0 00011111222 899999999999999988888888899999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 025026 232 VNPLVESFVTRH 243 (259)
Q Consensus 232 ~~~~i~~fl~~~ 243 (259)
|.++|.+|+...
T Consensus 302 ~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 302 FIESISEFLEEP 313 (315)
T ss_pred HHHHHHHHhccc
Confidence 999999999765
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.89 E-value=2.6e-22 Score=182.87 Aligned_cols=232 Identities=17% Similarity=0.196 Sum_probs=127.7
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-EEEEEeCcchHHHHHHHhh--Ccccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVM--EPEIC 78 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~--~p~~v 78 (259)
.|+++|+|+++|+||||.|+.+.. ...|+++++++|+.+++++++.++ ++|+||||||++++.++.+ .|+++
T Consensus 47 ~L~~~~~Vi~~D~~G~G~S~~~~~-----~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v 121 (582)
T PRK05855 47 LLADRFRVVAYDVRGAGRSSAPKR-----TAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRI 121 (582)
T ss_pred HhhcceEEEEecCCCCCCCCCCCc-----ccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhh
Confidence 467889999999999999986532 136899999999999999998776 9999999999999998877 35666
Q ss_pred cceEEeccchhhhh---ccCCC--CCCcchHHHHHHHHhhhhH--------HHHHHHhhcChHHHHHHHHhhcCCCCCCc
Q 025026 79 RGMILLNISLRMLH---IKKQP--WYGRPLIRSFQNLLRNTAA--------GKLFYKMVATSESVRNILCQCYNDTSQVT 145 (259)
Q Consensus 79 ~~lvli~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (259)
..++.++.+..... ..... .........+......... ...++.... .......... ... ....
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~ 198 (582)
T PRK05855 122 ASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGL-GRAWPRLLRR-VEG-TPVD 198 (582)
T ss_pred hhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccch-hhHHHHhhhh-ccC-CCcc
Confidence 66666554321000 00000 0000000000000000000 000000000 0000000000 000 0000
Q ss_pred HHHHHHHhccccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCC
Q 025026 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 225 (259)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 225 (259)
........ ..... ....+.... ............++|+|+|+|++|.++|....+.+.+..++.++++++ +||+++
T Consensus 199 ~~~~~~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~ 274 (582)
T PRK05855 199 PIPTQTTL-SDGAH-GVKLYRANM-IRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLP 274 (582)
T ss_pred hhhhhhhh-ccccc-hHHHHHhhh-hhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcch
Confidence 00000000 00000 000100000 000000000112499999999999999988887777777777887775 799999
Q ss_pred CCChhhHHHHHHHHHHhcCC
Q 025026 226 DEAPHLVNPLVESFVTRHAT 245 (259)
Q Consensus 226 ~e~p~~~~~~i~~fl~~~~~ 245 (259)
.|+|++|+++|.+|+.+...
T Consensus 275 ~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 275 MSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred hhChhHHHHHHHHHHHhccC
Confidence 99999999999999987543
No 45
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=2.5e-21 Score=167.37 Aligned_cols=212 Identities=19% Similarity=0.200 Sum_probs=122.6
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCEEEEEeCcchHHHHHHHhhCcc---c
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPE---I 77 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~---~ 77 (259)
.+|+|+++|+||||.|+... ...++++.+++|+.++++.+.. .+++|+||||||.+++.++. +|+ +
T Consensus 162 ~Gy~V~~~D~rGhG~S~~~~------~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~ 234 (395)
T PLN02652 162 CGFGVYAMDWIGHGGSDGLH------GYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDK 234 (395)
T ss_pred CCCEEEEeCCCCCCCCCCCC------CCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccc
Confidence 57999999999999998642 1235789999999999998863 37999999999999998765 564 8
Q ss_pred ccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCC-CCCCcHHHHHHHhccc
Q 025026 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND-TSQVTEELVEKILQPG 156 (259)
Q Consensus 78 v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 156 (259)
|+++|+.++..... ...+....+..... ..+.... +.. . ..... ...........+..+.
T Consensus 235 v~glVL~sP~l~~~-------~~~~~~~~~~~l~~------~~~p~~~----~~~-~-~~~~~~~s~~~~~~~~~~~dp~ 295 (395)
T PLN02652 235 LEGIVLTSPALRVK-------PAHPIVGAVAPIFS------LVAPRFQ----FKG-A-NKRGIPVSRDPAALLAKYSDPL 295 (395)
T ss_pred cceEEEECcccccc-------cchHHHHHHHHHHH------HhCCCCc----ccC-c-ccccCCcCCCHHHHHHHhcCCC
Confidence 99999987542210 00011111100000 0000000 000 0 00000 0000111111111111
Q ss_pred cCcchH--HHHHHHHHhhCCCCccccCC--CCCeEEEecCCCCCCCchhhhhhcCC-C-CcccEEEcCCCCCCCCCC-Ch
Q 025026 157 LETGAA--DVFLEFICYSGGPLPEELLP--QCPVLIAWGDKDPWEPIELGRAYGNF-D-SVEDFIVLPNVGHCPQDE-AP 229 (259)
Q Consensus 157 ~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~-~-~~~~~~~i~~~GH~~~~e-~p 229 (259)
...+.. ........... .. ...+. ++|+|+|+|++|.++|.+.++.+.+. . +..+++++++++|.++.| +|
T Consensus 296 ~~~g~i~~~~~~~~~~~~~-~l-~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~ 373 (395)
T PLN02652 296 VYTGPIRVRTGHEILRISS-YL-TRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPER 373 (395)
T ss_pred cccCCchHHHHHHHHHHHH-HH-HhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCH
Confidence 111111 00000100000 00 11122 39999999999999999888775433 2 346899999999998776 79
Q ss_pred hhHHHHHHHHHHhcC
Q 025026 230 HLVNPLVESFVTRHA 244 (259)
Q Consensus 230 ~~~~~~i~~fl~~~~ 244 (259)
+++.+.+.+||+.+.
T Consensus 374 e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 374 EEVGRDIIDWMEKRL 388 (395)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 46
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.84 E-value=1.9e-19 Score=150.21 Aligned_cols=224 Identities=20% Similarity=0.261 Sum_probs=126.9
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
..+|.|+++|+||||+|.+ ..+. ..-+++++.+|+.++++.... .+++|+||||||.|++.++.+++.+|.
T Consensus 59 ~~G~~V~~~D~RGhG~S~r-~~rg----~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~ 133 (298)
T COG2267 59 ARGFDVYALDLRGHGRSPR-GQRG----HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRID 133 (298)
T ss_pred hCCCEEEEecCCCCCCCCC-CCcC----CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCcccc
Confidence 4689999999999999973 1111 123599999999999998863 589999999999999999999999999
Q ss_pred ceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc-cccC
Q 025026 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ-PGLE 158 (259)
Q Consensus 80 ~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 158 (259)
++|+.++...... . .....+..... ...+.......... . . ...........+++..+.+.. |...
T Consensus 134 ~~vLssP~~~l~~-----~---~~~~~~~~~~~-~~~~~~~p~~~~~~-~-~--~~~~~~~~~sr~~~~~~~~~~dP~~~ 200 (298)
T COG2267 134 GLVLSSPALGLGG-----A---ILRLILARLAL-KLLGRIRPKLPVDS-N-L--LEGVLTDDLSRDPAEVAAYEADPLIG 200 (298)
T ss_pred EEEEECccccCCh-----h---HHHHHHHHHhc-ccccccccccccCc-c-c--ccCcCcchhhcCHHHHHHHhcCCccc
Confidence 9999876432110 0 00000000000 00000000000000 0 0 000000000112223333322 1111
Q ss_pred c-chHHHHHHHHHhhCC-CCcc-ccCCCCCeEEEecCCCCCCC-chhhhh-hcCC-CCcccEEEcCCCCCCCCCCCh---
Q 025026 159 T-GAADVFLEFICYSGG-PLPE-ELLPQCPVLIAWGDKDPWEP-IELGRA-YGNF-DSVEDFIVLPNVGHCPQDEAP--- 229 (259)
Q Consensus 159 ~-~~~~~~~~~~~~~~~-~~~~-~~~~~~PvliI~G~~D~~~~-~~~~~~-~~~~-~~~~~~~~i~~~GH~~~~e~p--- 229 (259)
. +....+......... .... .....+|||+++|++|.+++ .+...+ +.+. .++.++++++|+.|-++.|.+
T Consensus 201 ~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r 280 (298)
T COG2267 201 VGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAR 280 (298)
T ss_pred cCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHH
Confidence 1 111111111111111 1111 11123999999999999998 565543 3333 566799999999999987764
Q ss_pred hhHHHHHHHHHHhcCC
Q 025026 230 HLVNPLVESFVTRHAT 245 (259)
Q Consensus 230 ~~~~~~i~~fl~~~~~ 245 (259)
+++.+.+.+|+.+..+
T Consensus 281 ~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 281 EEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 5788888899977654
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.82 E-value=1.1e-18 Score=152.19 Aligned_cols=190 Identities=15% Similarity=0.154 Sum_probs=118.1
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
+.+|+|+++|+||||.|.... ...+.....+.+.+++... +.+++.++||||||.+|+.+|..+|++|++
T Consensus 220 ~~Gy~vl~~D~pG~G~s~~~~-------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a 292 (414)
T PRK05077 220 PRGIAMLTIDMPSVGFSSKWK-------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKA 292 (414)
T ss_pred hCCCEEEEECCCCCCCCCCCC-------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceE
Confidence 346999999999999996521 1123444556666666655 457899999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcc
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (259)
+|++++..... ... ...... . .. .+ ...+....... ..+.+.+...+...
T Consensus 293 ~V~~~~~~~~~-------~~~--~~~~~~-~--p~----~~---------~~~la~~lg~~-~~~~~~l~~~l~~~---- 342 (414)
T PRK05077 293 VACLGPVVHTL-------LTD--PKRQQQ-V--PE----MY---------LDVLASRLGMH-DASDEALRVELNRY---- 342 (414)
T ss_pred EEEECCccchh-------hcc--hhhhhh-c--hH----HH---------HHHHHHHhCCC-CCChHHHHHHhhhc----
Confidence 99998653211 000 000000 0 00 00 00000001100 11111111110000
Q ss_pred hHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 025026 161 AADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 240 (259)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl 240 (259)
......... ..-++|+|+|+|++|+++|.+.++.+.+..+++++++||++ ++.+.|+++++.+.+||
T Consensus 343 ---------sl~~~~~l~-~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL 409 (414)
T PRK05077 343 ---------SLKVQGLLG-RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWL 409 (414)
T ss_pred ---------cchhhhhhc-cCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHH
Confidence 000000000 01238999999999999999999888777788999999997 67789999999999999
Q ss_pred Hhc
Q 025026 241 TRH 243 (259)
Q Consensus 241 ~~~ 243 (259)
+++
T Consensus 410 ~~~ 412 (414)
T PRK05077 410 EDR 412 (414)
T ss_pred HHH
Confidence 864
No 48
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.82 E-value=1e-18 Score=154.95 Aligned_cols=223 Identities=13% Similarity=0.080 Sum_probs=122.8
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHH----HHHhhC-cccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGL----QAAVME-PEIC 78 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~----~~a~~~-p~~v 78 (259)
+++|+|+++|++|+|.|....+ ...|..+.+.+.|..+++..+.+++++|||||||.++. .++..+ |++|
T Consensus 218 ~qGf~V~~iDwrgpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv 292 (532)
T TIGR01838 218 EQGHTVFVISWRNPDASQADKT-----FDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRI 292 (532)
T ss_pred HCCcEEEEEECCCCCcccccCC-----hhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCcc
Confidence 4679999999999999875321 12455556666777777788899999999999999852 245565 8899
Q ss_pred cceEEeccchhhhhccCC-CCCCcchHHHHHHHHhhh-----hHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 025026 79 RGMILLNISLRMLHIKKQ-PWYGRPLIRSFQNLLRNT-----AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (259)
Q Consensus 79 ~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (259)
++++++++.......... .+........+....... ......|+.+.....+.......+-.........+..+
T Consensus 293 ~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~W 372 (532)
T TIGR01838 293 KSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFW 372 (532)
T ss_pred ceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHH
Confidence 999999876432211000 011111111222221110 01122344443333322211111111111111111111
Q ss_pred hccccC-cchH-HHHH-HHHHhh---CCCCc----cccCC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCC
Q 025026 153 LQPGLE-TGAA-DVFL-EFICYS---GGPLP----EELLP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV 220 (259)
Q Consensus 153 ~~~~~~-~~~~-~~~~-~~~~~~---~~~~~----~~~~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~ 220 (259)
...... ++.. ..++ +++... .+.+. ...+. ++|+|+|+|++|.++|.+.+..+.+..++.+.++++++
T Consensus 373 n~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~s 452 (532)
T TIGR01838 373 NSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGES 452 (532)
T ss_pred hccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCC
Confidence 111111 1111 1111 111100 01010 11122 29999999999999999888877777778889999999
Q ss_pred CCCCCCCChhh
Q 025026 221 GHCPQDEAPHL 231 (259)
Q Consensus 221 GH~~~~e~p~~ 231 (259)
||++++++|..
T Consensus 453 GHi~~ienPp~ 463 (532)
T TIGR01838 453 GHIAGVVNPPS 463 (532)
T ss_pred CCchHhhCCCC
Confidence 99999999864
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.81 E-value=1.1e-18 Score=144.62 Aligned_cols=73 Identities=18% Similarity=0.086 Sum_probs=61.7
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----cCCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
.+|+|+++|+||||+|... .++++++.+|+.+.++.+ +.++++++||||||.+++.+|.. +++|+
T Consensus 56 ~G~~v~~~Dl~G~G~S~~~---------~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~ 125 (274)
T TIGR03100 56 AGFPVLRFDYRGMGDSEGE---------NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVA 125 (274)
T ss_pred CCCEEEEeCCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCcc
Confidence 4699999999999998642 246778888999888887 45789999999999999999875 46899
Q ss_pred ceEEeccc
Q 025026 80 GMILLNIS 87 (259)
Q Consensus 80 ~lvli~~~ 87 (259)
++|++++.
T Consensus 126 ~lil~~p~ 133 (274)
T TIGR03100 126 GLVLLNPW 133 (274)
T ss_pred EEEEECCc
Confidence 99999864
No 50
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.81 E-value=1.5e-18 Score=147.48 Aligned_cols=218 Identities=14% Similarity=0.142 Sum_probs=120.5
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------------------------CCCEEEEE
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------------------------KDQAFFIC 59 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~------------------------~~~~~lvG 59 (259)
.++|+|+++|+||||+|+...... ....+++++++|+.++++... ..+++|+|
T Consensus 72 ~~G~~V~~~D~rGHG~S~~~~~~~---g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 72 KNGYSVYGLDLQGHGESDGLQNLR---GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred HCCCcEEEecccccCCCccccccc---cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 357999999999999997532100 012479999999999998752 23689999
Q ss_pred eCcchHHHHHHHhhCcc--------cccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHH
Q 025026 60 NSIGGLVGLQAAVMEPE--------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVR 131 (259)
Q Consensus 60 hS~Gg~ia~~~a~~~p~--------~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (259)
|||||.|++.++.++++ .++++|++++.............. .......+++. +. .++..+.....
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~--~~~~~~~l~~~--~~-~~~p~~~~~~~-- 221 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFK--FKYFYLPVMNF--MS-RVFPTFRISKK-- 221 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcch--hhhhHHHHHHH--HH-HHCCcccccCc--
Confidence 99999999999987653 588998877643211000000000 00000011100 00 01110000000
Q ss_pred HHHHhhcCCCCCCcHHHHHHH-hcccc-----CcchHHHHHHHHHhhCCCCccccCC-CCCeEEEecCCCCCCCchhhhh
Q 025026 132 NILCQCYNDTSQVTEELVEKI-LQPGL-----ETGAADVFLEFICYSGGPLPEELLP-QCPVLIAWGDKDPWEPIELGRA 204 (259)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~PvliI~G~~D~~~~~~~~~~ 204 (259)
... . ..+...+.+ ..+.. .......+......... ....+. ++|+|+|+|++|.+++.+.+..
T Consensus 222 -----~~~--~-~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~--~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 222 -----IRY--E-KSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDC--DIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred -----ccc--c-cChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHh--hHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 000 0 000111111 01100 00111111111110000 011122 4999999999999999887776
Q ss_pred hcCC--CCcccEEEcCCCCCCCCCCC-hhhHHHHHHHHHH
Q 025026 205 YGNF--DSVEDFIVLPNVGHCPQDEA-PHLVNPLVESFVT 241 (259)
Q Consensus 205 ~~~~--~~~~~~~~i~~~GH~~~~e~-p~~~~~~i~~fl~ 241 (259)
+.+. .++.+++++++++|.++.|. ++++.+.+.+||+
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 5432 35678999999999999886 6889999999985
No 51
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=4.6e-18 Score=137.49 Aligned_cols=74 Identities=30% Similarity=0.501 Sum_probs=65.1
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEecc
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 86 (259)
|+|+++|+||||.|. .. .+....+++++..++++++.++++++||||||.+++.++.++|++++++|++++
T Consensus 51 ~~~~~~d~~g~g~s~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA--------GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEecccCCCCCC-cc--------cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 899999999999997 10 234555599999999999999999999999999999999999999999999997
Q ss_pred chh
Q 025026 87 SLR 89 (259)
Q Consensus 87 ~~~ 89 (259)
...
T Consensus 122 ~~~ 124 (282)
T COG0596 122 APP 124 (282)
T ss_pred CCC
Confidence 643
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.77 E-value=3.1e-17 Score=139.16 Aligned_cols=213 Identities=13% Similarity=0.086 Sum_probs=112.4
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCccc--c
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFY---TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI--C 78 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y---~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v 78 (259)
..+|+|+++|+||||.|....+ ..| ..++..+.+..+.++++..++++|||||||.++..++.++++. |
T Consensus 85 ~~G~~v~~~d~rG~g~~~~~~~------~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~ 158 (324)
T PRK10985 85 KRGWLGVVMHFRGCSGEPNRLH------RIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPL 158 (324)
T ss_pred HCCCEEEEEeCCCCCCCccCCc------ceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCc
Confidence 3579999999999998753221 112 2333333232333345667899999999999999988887654 8
Q ss_pred cceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHH---------
Q 025026 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV--------- 149 (259)
Q Consensus 79 ~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 149 (259)
.++|+++++....... ..+..... ......+...+. ..+...... +........+.+
T Consensus 159 ~~~v~i~~p~~~~~~~----------~~~~~~~~-~~~~~~l~~~l~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f 224 (324)
T PRK10985 159 DAAVIVSAPLMLEACS----------YRMEQGFS-RVYQRYLLNLLK--ANAARKLAA-YPGTLPINLAQLKSVRRLREF 224 (324)
T ss_pred cEEEEEcCCCCHHHHH----------HHHhhhHH-HHHHHHHHHHHH--HHHHHHHHh-ccccccCCHHHHhcCCcHHHH
Confidence 9999998753221100 00000000 000000000000 000000000 110000111111
Q ss_pred -HHHhccccC-cchHHHHHHHHHhhCCCCccccCCC--CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCC
Q 025026 150 -EKILQPGLE-TGAADVFLEFICYSGGPLPEELLPQ--CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 225 (259)
Q Consensus 150 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 225 (259)
+.+..+... ....+. +. .... .+.+.+ +|+++|+|++|++++.+....+.+..+++++++++++||+++
T Consensus 225 d~~~~~~~~g~~~~~~~----y~--~~~~-~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~ 297 (324)
T PRK10985 225 DDLITARIHGFADAIDY----YR--QCSA-LPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGF 297 (324)
T ss_pred hhhheeccCCCCCHHHH----HH--HCCh-HHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceee
Confidence 111111100 011111 11 0111 122333 899999999999998877666666677889999999999999
Q ss_pred CCCh-----hhHHHHHHHHHHhc
Q 025026 226 DEAP-----HLVNPLVESFVTRH 243 (259)
Q Consensus 226 ~e~p-----~~~~~~i~~fl~~~ 243 (259)
+|.. -..-+.+.+|++..
T Consensus 298 ~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 298 VGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCCCCCCccHHHHHHHHHHHh
Confidence 9853 24567777888654
No 53
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.74 E-value=1.7e-17 Score=131.67 Aligned_cols=218 Identities=22% Similarity=0.365 Sum_probs=120.0
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCEEEEEeCcchHHHHHHHhh--Ccccccc
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVM--EPEICRG 80 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~ 80 (259)
+.||+|+|+||||+|.-.+ ....+.+.++.|+.+++..+- ..+++||||||||.|+...|.. -|. +.|
T Consensus 102 ~~r~~a~DlRgHGeTk~~~------e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~G 174 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVEN------EDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAG 174 (343)
T ss_pred ceeEEEeeccccCccccCC------hhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhc
Confidence 4889999999999996533 245899999999999999984 3589999999999999988775 477 999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCC---CCC--cHHHH---H--
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT---SQV--TEELV---E-- 150 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~---~-- 150 (259)
++++|..-... ......++..+++++. .|+.+ +..+..-......+. .++ +..+. +
T Consensus 175 l~viDVVEgtA---------meAL~~m~~fL~~rP~---~F~Si--~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh 240 (343)
T KOG2564|consen 175 LVVIDVVEGTA---------MEALNSMQHFLRNRPK---SFKSI--EDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGH 240 (343)
T ss_pred eEEEEEechHH---------HHHHHHHHHHHhcCCc---cccch--hhHHHHHhccccccccccceEecchheeeccCCC
Confidence 99998642100 0000111112222211 11111 000110000000000 000 00000 0
Q ss_pred HH-hccccCcchHHHHHHHHHhhCCCCccccCC-CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCC
Q 025026 151 KI-LQPGLETGAADVFLEFICYSGGPLPEELLP-QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 228 (259)
Q Consensus 151 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~ 228 (259)
.+ .+..+. ..-.++..|+ .+ +....+. .+|-++|-...|..-. +. ...+..-.-|+.++|.|||++|++.
T Consensus 241 ~yvwrtdL~-kte~YW~gWF--~g--LS~~Fl~~p~~klLilAg~d~LDk-dL--tiGQMQGk~Q~~vL~~~GH~v~ED~ 312 (343)
T KOG2564|consen 241 CYVWRTDLE-KTEQYWKGWF--KG--LSDKFLGLPVPKLLILAGVDRLDK-DL--TIGQMQGKFQLQVLPLCGHFVHEDS 312 (343)
T ss_pred cEEEEeecc-ccchhHHHHH--hh--hhhHhhCCCccceeEEecccccCc-ce--eeeeeccceeeeeecccCceeccCC
Confidence 00 000000 0000111111 10 1111122 2888888777776421 11 1222222358999999999999999
Q ss_pred hhhHHHHHHHHHHhcCCCCccccc
Q 025026 229 PHLVNPLVESFVTRHATPPASVSA 252 (259)
Q Consensus 229 p~~~~~~i~~fl~~~~~~~~~~~~ 252 (259)
|..+...+..|+.++.-....+++
T Consensus 313 P~kva~~~~~f~~Rn~~~~~~~g~ 336 (343)
T KOG2564|consen 313 PHKVAECLCVFWIRNRFAEPKVGA 336 (343)
T ss_pred cchHHHHHHHHHhhhccccccccc
Confidence 999999999999988755444444
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.72 E-value=2.2e-16 Score=135.43 Aligned_cols=75 Identities=19% Similarity=0.362 Sum_probs=60.8
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHH----HHHHhcCCCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LND----FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~d-l~~----~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
..+|+|+++|++|+|.|+. .+++++++.+ +.+ +++..+.++++++||||||++++.++..+|++|
T Consensus 92 ~~G~~V~~~D~~g~g~s~~----------~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v 161 (350)
T TIGR01836 92 ERGQDVYLIDWGYPDRADR----------YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKI 161 (350)
T ss_pred HCCCeEEEEeCCCCCHHHh----------cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchhe
Confidence 3569999999999998864 2467777643 444 444556789999999999999999999999999
Q ss_pred cceEEeccch
Q 025026 79 RGMILLNISL 88 (259)
Q Consensus 79 ~~lvli~~~~ 88 (259)
+++|+++++.
T Consensus 162 ~~lv~~~~p~ 171 (350)
T TIGR01836 162 KNLVTMVTPV 171 (350)
T ss_pred eeEEEecccc
Confidence 9999998754
No 55
>PLN02872 triacylglycerol lipase
Probab=99.72 E-value=4.9e-16 Score=134.19 Aligned_cols=234 Identities=15% Similarity=0.156 Sum_probs=123.0
Q ss_pred cC-CCCeEEEeCCCCCCCCCCCCCCCCC--CCCCCCHHHHH-HHHHHHHHHh---cCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFF--DKPFYTFETWA-SQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 3 L~-~~~~via~Dl~G~G~S~~~~~~~~~--~~~~y~~~~~a-~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
|+ .+|+|+++|+||+|.|......... ....|++++++ .|+.++++.+ ..+++++||||+||.+++. ++.+|
T Consensus 103 La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~-~~~~p 181 (395)
T PLN02872 103 LADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLA-ALTQP 181 (395)
T ss_pred HHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHH-HhhCh
Confidence 44 4799999999999876321100000 01247899999 8999999987 3479999999999999985 44678
Q ss_pred c---cccceEEeccchhhhhccCCCCCCcchHHHHHH-----H---Hh------hhhHHHHHHHhhcChHH-HHHHHHhh
Q 025026 76 E---ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN-----L---LR------NTAAGKLFYKMVATSES-VRNILCQC 137 (259)
Q Consensus 76 ~---~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~------~~~~~~~~~~~~~~~~~-~~~~~~~~ 137 (259)
+ +|+.++++++.....+. ..++...+.. . +. .......+...+..... -...+...
T Consensus 182 ~~~~~v~~~~~l~P~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~ 255 (395)
T PLN02872 182 NVVEMVEAAALLCPISYLDHV------TAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSI 255 (395)
T ss_pred HHHHHHHHHHHhcchhhhccC------CCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHH
Confidence 7 58888887765432211 1111111000 0 00 00000000000000000 00000000
Q ss_pred cCCCCCCcHHHHHHHhccccCcchHHH---H-----------------HHHHHhhCCCCccccCC----CCCeEEEecCC
Q 025026 138 YNDTSQVTEELVEKILQPGLETGAADV---F-----------------LEFICYSGGPLPEELLP----QCPVLIAWGDK 193 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~----~~PvliI~G~~ 193 (259)
.+.....+...+..++.........+. + .+...|.....++..+. ++|+++++|++
T Consensus 256 ~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~ 335 (395)
T PLN02872 256 TGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGT 335 (395)
T ss_pred hCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCC
Confidence 000011111111111110000000000 0 01111222112222222 27999999999
Q ss_pred CCCCCchhhhhhcCCCCc-ccEEEcCCCCCC---CCCCChhhHHHHHHHHHHhc
Q 025026 194 DPWEPIELGRAYGNFDSV-EDFIVLPNVGHC---PQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 194 D~~~~~~~~~~~~~~~~~-~~~~~i~~~GH~---~~~e~p~~~~~~i~~fl~~~ 243 (259)
|..++++....+.+..++ .+++.++++||+ ...|.|+++.+.|.+|+++.
T Consensus 336 D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 336 DGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 999988766665544443 688999999995 56799999999999999853
No 56
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.71 E-value=3.3e-16 Score=120.56 Aligned_cols=196 Identities=19% Similarity=0.248 Sum_probs=119.1
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
++|.|+||-+||||....-- -.++.++|-+++..-.+.| +.+++.++|.||||.+++.+|..+| ++++
T Consensus 41 ~GyTv~aP~ypGHG~~~e~f-------l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~i 111 (243)
T COG1647 41 NGYTVYAPRYPGHGTLPEDF-------LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKI 111 (243)
T ss_pred CCceEecCCCCCCCCCHHHH-------hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccce
Confidence 46999999999999875311 2468999999888877776 4679999999999999999999999 9999
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|.++++.... .+. ..++.+....++.. .+. ..+.+.+.+.+. .+.+. + ...
T Consensus 112 v~m~a~~~~k---~~~----~iie~~l~y~~~~k----k~e-~k~~e~~~~e~~-~~~~~-------------~---~~~ 162 (243)
T COG1647 112 VPMCAPVNVK---SWR----IIIEGLLEYFRNAK----KYE-GKDQEQIDKEMK-SYKDT-------------P---MTT 162 (243)
T ss_pred eeecCCcccc---cch----hhhHHHHHHHHHhh----hcc-CCCHHHHHHHHH-Hhhcc-------------h---HHH
Confidence 9999753211 111 11111111111100 000 001111111110 01000 0 001
Q ss_pred HHHHHHHHHhhCCCCcccc-CCCCCeEEEecCCCCCCCchhhhhhcC-CC-CcccEEEcCCCCCCCCCC-ChhhHHHHHH
Q 025026 162 ADVFLEFICYSGGPLPEEL-LPQCPVLIAWGDKDPWEPIELGRAYGN-FD-SVEDFIVLPNVGHCPQDE-APHLVNPLVE 237 (259)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~~PvliI~G~~D~~~~~~~~~~~~~-~~-~~~~~~~i~~~GH~~~~e-~p~~~~~~i~ 237 (259)
...+..++... .+.. .-..|+++++|++|+.+|.+.+..+-+ .. ..-++.+++++||.+-.+ .-+.+.+.+.
T Consensus 163 ~~~~~~~i~~~----~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 163 TAQLKKLIKDA----RRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred HHHHHHHHHHH----HhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHH
Confidence 11111111100 0010 113899999999999999988776433 22 234899999999996654 4688999999
Q ss_pred HHHHh
Q 025026 238 SFVTR 242 (259)
Q Consensus 238 ~fl~~ 242 (259)
.||++
T Consensus 239 ~FL~~ 243 (243)
T COG1647 239 TFLEK 243 (243)
T ss_pred HHhhC
Confidence 99963
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.70 E-value=6.1e-16 Score=121.11 Aligned_cols=159 Identities=11% Similarity=0.018 Sum_probs=104.2
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEe
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli 84 (259)
.+|+|+++|+||||. ++++++.+++++++.+++++|||||||++++.+|.++|. ++|++
T Consensus 31 ~~~~v~~~dl~g~~~------------------~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~ 89 (190)
T PRK11071 31 PDIEMIVPQLPPYPA------------------DAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVV 89 (190)
T ss_pred CCCeEEeCCCCCCHH------------------HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEE
Confidence 379999999999851 357788899999999999999999999999999999994 46788
Q ss_pred ccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHH
Q 025026 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (259)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
+++..+ .+.+....... .. ....+...++.+.++..
T Consensus 90 ~~~~~~-------------~~~~~~~~~~~------~~-------------~~~~~~~~~~~~~~~d~------------ 125 (190)
T PRK11071 90 NPAVRP-------------FELLTDYLGEN------EN-------------PYTGQQYVLESRHIYDL------------ 125 (190)
T ss_pred CCCCCH-------------HHHHHHhcCCc------cc-------------ccCCCcEEEcHHHHHHH------------
Confidence 764221 01111110000 00 00000001112222111
Q ss_pred HHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHH
Q 025026 165 FLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 241 (259)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 241 (259)
..+ .. .+.-..+|+++|+|++|..+|.+.+.++.+ +++.++++|++|.. ...+++.+.+.+|+.
T Consensus 126 ----~~~---~~-~~i~~~~~v~iihg~~De~V~~~~a~~~~~---~~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 126 ----KVM---QI-DPLESPDLIWLLQQTGDEVLDYRQAVAYYA---ACRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ----Hhc---CC-ccCCChhhEEEEEeCCCCcCCHHHHHHHHH---hcceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 001 11 111123899999999999999999887655 35777899999987 455888899999874
No 58
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.69 E-value=2.4e-16 Score=127.07 Aligned_cols=215 Identities=21% Similarity=0.246 Sum_probs=123.0
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
.+|-|+++|++|||.|+.... ..-+++..++|+..+.+... ..+..|.||||||.|++.++.++|+..
T Consensus 81 ~g~~v~a~D~~GhG~SdGl~~------yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w 154 (313)
T KOG1455|consen 81 SGFAVYAIDYEGHGRSDGLHA------YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFW 154 (313)
T ss_pred CCCeEEEeeccCCCcCCCCcc------cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCccc
Confidence 579999999999999986421 23479999999999988643 236889999999999999999999999
Q ss_pred cceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH-hcccc
Q 025026 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI-LQPGL 157 (259)
Q Consensus 79 ~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (259)
.|+|++.+.-...+..+..+ ....+..++..- + .-|+...++..+. ..+ ..++..... ..|..
T Consensus 155 ~G~ilvaPmc~i~~~~kp~p----~v~~~l~~l~~l-i--P~wk~vp~~d~~~----~~~-----kdp~~r~~~~~npl~ 218 (313)
T KOG1455|consen 155 DGAILVAPMCKISEDTKPHP----PVISILTLLSKL-I--PTWKIVPTKDIID----VAF-----KDPEKRKILRSDPLC 218 (313)
T ss_pred ccceeeecccccCCccCCCc----HHHHHHHHHHHh-C--CceeecCCccccc----ccc-----CCHHHHHHhhcCCce
Confidence 99999875432221111111 111111111100 0 0011000000000 000 001111110 01100
Q ss_pred C--cchHHHHHHHHHhhCCCCccccCCC--CCeEEEecCCCCCCCchhhhhhcCC--CCcccEEEcCCCCCCCCC-CChh
Q 025026 158 E--TGAADVFLEFICYSGGPLPEELLPQ--CPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQD-EAPH 230 (259)
Q Consensus 158 ~--~~~~~~~~~~~~~~~~~~~~~~~~~--~PvliI~G~~D~~~~~~~~~~~~~~--~~~~~~~~i~~~GH~~~~-e~p~ 230 (259)
- ...+....+++.... .+ +..+.+ +|.+|+||+.|.++-+..++.+-+. ...-+++++||.=|-++. |-+|
T Consensus 219 y~g~pRl~T~~ElLr~~~-~l-e~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~e 296 (313)
T KOG1455|consen 219 YTGKPRLKTAYELLRVTA-DL-EKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDE 296 (313)
T ss_pred ecCCccHHHHHHHHHHHH-HH-HHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCch
Confidence 0 112223333322211 01 112233 9999999999999988888775432 344589999999999886 5554
Q ss_pred h---HHHHHHHHHHhc
Q 025026 231 L---VNPLVESFVTRH 243 (259)
Q Consensus 231 ~---~~~~i~~fl~~~ 243 (259)
. +..-|.+||++.
T Consensus 297 n~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 297 NVEIVFGDIISWLDER 312 (313)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 4 455566777653
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.67 E-value=1.9e-15 Score=145.27 Aligned_cols=232 Identities=18% Similarity=0.220 Sum_probs=124.8
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCEEEEEeCcchHHHHHHHhhC-cccccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVKDQAFFICNSIGGLVGLQAAVME-PEICRG 80 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~ 80 (259)
.+|+|+++| +|.|+++.. ...+++.+++..+.+.++. ++.++++||||||||++++.+|+.+ |++|++
T Consensus 98 ~g~~v~~~d---~G~~~~~~~-----~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~ 169 (994)
T PRK07868 98 AGLDPWVID---FGSPDKVEG-----GMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIAS 169 (994)
T ss_pred CCCEEEEEc---CCCCChhHc-----CccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccce
Confidence 469999999 577776431 1236788888777776665 4457999999999999999998755 668999
Q ss_pred eEEeccchhhhhcc--CCC--C--CCcchH-HHHHHHHhhh-hHHHHHHHhhcChHHHH---HHHHhhcCCCCCCcHHHH
Q 025026 81 MILLNISLRMLHIK--KQP--W--YGRPLI-RSFQNLLRNT-AAGKLFYKMVATSESVR---NILCQCYNDTSQVTEELV 149 (259)
Q Consensus 81 lvli~~~~~~~~~~--~~~--~--~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 149 (259)
+|+++++....... ..+ . ....+. ..+.....-+ +.....|+.+.....+. .++..........+++..
T Consensus 170 lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~ 249 (994)
T PRK07868 170 IVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQ 249 (994)
T ss_pred EEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhh
Confidence 99988763211000 000 0 000000 0000000000 01111122211111111 111111111111122222
Q ss_pred HHHhccc-c--Ccc-h-HHHHHHHHHhh---CCCCc--c--ccCCC--CCeEEEecCCCCCCCchhhhhhcCCCCcccE-
Q 025026 150 EKILQPG-L--ETG-A-ADVFLEFICYS---GGPLP--E--ELLPQ--CPVLIAWGDKDPWEPIELGRAYGNFDSVEDF- 214 (259)
Q Consensus 150 ~~~~~~~-~--~~~-~-~~~~~~~~~~~---~~~~~--~--~~~~~--~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~- 214 (259)
..+.... + .++ . .+....+.... .+... . ..+.+ +|+|+|||++|.++|++.++.+.+..+++++
T Consensus 250 ~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~ 329 (994)
T PRK07868 250 RRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVY 329 (994)
T ss_pred HhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEE
Confidence 2222211 1 111 1 11111121110 00000 0 12333 8999999999999999988888777788887
Q ss_pred EEcCCCCCCCCC---CChhhHHHHHHHHHHhcC
Q 025026 215 IVLPNVGHCPQD---EAPHLVNPLVESFVTRHA 244 (259)
Q Consensus 215 ~~i~~~GH~~~~---e~p~~~~~~i~~fl~~~~ 244 (259)
+++++|||+.++ .-|+++-..|.+||++..
T Consensus 330 ~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 330 ESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred EEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 688999999775 347788899999998653
No 60
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.65 E-value=4.3e-14 Score=113.25 Aligned_cols=221 Identities=19% Similarity=0.278 Sum_probs=135.2
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
+.++|.|+-+|-|||=.-...-+.+. ..-+++++|++|..++++++.+.++=+|--.|+.|-.++|+.||+||.+||
T Consensus 75 i~~~fcv~HV~~PGqe~gAp~~p~~y---~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 75 ILEHFCVYHVDAPGQEDGAPSFPEGY---PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred HHhheEEEecCCCccccCCccCCCCC---CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEE
Confidence 45679999999999987655433221 233899999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHH-HHhhcCCC-CCCcHHHHHHHh---cccc
Q 025026 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNI-LCQCYNDT-SQVTEELVEKIL---QPGL 157 (259)
Q Consensus 83 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~---~~~~ 157 (259)
+|+..+... .|......+....+++...+ +. .+..+ +...++.. .....+.++.+. ....
T Consensus 152 LIn~~~~a~-----gwiew~~~K~~s~~l~~~Gm---------t~-~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~ 216 (326)
T KOG2931|consen 152 LINCDPCAK-----GWIEWAYNKVSSNLLYYYGM---------TQ-GVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERL 216 (326)
T ss_pred EEecCCCCc-----hHHHHHHHHHHHHHHHhhch---------hh-hHHHHHHHHHhccccccccHHHHHHHHHHHHhcC
Confidence 998643211 11100000111111111110 10 11111 11112111 111233333332 2223
Q ss_pred CcchHHHHHHHHHhhCCCCccc--cCC---CCCeEEEecCCCCCCCchhhhhh-cCC-CCcccEEEcCCCCCCCCCCChh
Q 025026 158 ETGAADVFLEFICYSGGPLPEE--LLP---QCPVLIAWGDKDPWEPIELGRAY-GNF-DSVEDFIVLPNVGHCPQDEAPH 230 (259)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~--~~~---~~PvliI~G~~D~~~~~~~~~~~-~~~-~~~~~~~~i~~~GH~~~~e~p~ 230 (259)
.+..+..|+..+..+ .++... ... +||||++.|++.+.+. ....+ .++ ..++.+..|.+||=.+++|+|.
T Consensus 217 N~~Nl~~fl~ayn~R-~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~ 293 (326)
T KOG2931|consen 217 NPKNLALFLNAYNGR-RDLSIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPG 293 (326)
T ss_pred ChhHHHHHHHHhcCC-CCccccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCch
Confidence 334444444433211 112111 111 2999999999988653 22222 233 3357889999999999999999
Q ss_pred hHHHHHHHHHHhcC
Q 025026 231 LVNPLVESFVTRHA 244 (259)
Q Consensus 231 ~~~~~i~~fl~~~~ 244 (259)
.+.+.++=|++...
T Consensus 294 kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 294 KLAEAFKYFLQGMG 307 (326)
T ss_pred HHHHHHHHHHccCC
Confidence 99999999998654
No 61
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.64 E-value=3.7e-15 Score=120.72 Aligned_cols=220 Identities=18% Similarity=0.225 Sum_probs=116.0
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
+.++|.++-+|-||+..-..+.+.+ -..-|++++|++|.+++++++++.++-+|--.||.|-.++|+.||++|.++|
T Consensus 52 i~~~f~i~Hi~aPGqe~ga~~~p~~---y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLi 128 (283)
T PF03096_consen 52 ILQNFCIYHIDAPGQEEGAATLPEG---YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLI 128 (283)
T ss_dssp HHTTSEEEEEE-TTTSTT-----TT--------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HhhceEEEEEeCCCCCCCccccccc---ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEE
Confidence 5678999999999999866544322 1233899999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhh-cCCC-CCCcHHHHHHHh---cccc
Q 025026 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQC-YNDT-SQVTEELVEKIL---QPGL 157 (259)
Q Consensus 83 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~---~~~~ 157 (259)
+++...... .+.+.+...+....+ ...-.+. .+...+.+. ++.. .....+.++.+. ....
T Consensus 129 Lvn~~~~~~----------gw~Ew~~~K~~~~~L----~~~gmt~-~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~ 193 (283)
T PF03096_consen 129 LVNPTCTAA----------GWMEWFYQKLSSWLL----YSYGMTS-SVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERI 193 (283)
T ss_dssp EES---S-------------HHHHHHHHHH-----------CTTS--HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-T
T ss_pred EEecCCCCc----------cHHHHHHHHHhcccc----ccccccc-chHHhhhhcccccccccccHHHHHHHHHHHhcCC
Confidence 999754321 011111111100000 0000000 000000000 0000 000122332221 1112
Q ss_pred CcchHHHHHHHHHhhCCCCccccCC-CCCeEEEecCCCCCCCchhhhh-hcCC-CCcccEEEcCCCCCCCCCCChhhHHH
Q 025026 158 ETGAADVFLEFICYSGGPLPEELLP-QCPVLIAWGDKDPWEPIELGRA-YGNF-DSVEDFIVLPNVGHCPQDEAPHLVNP 234 (259)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~PvliI~G~~D~~~~~~~~~~-~~~~-~~~~~~~~i~~~GH~~~~e~p~~~~~ 234 (259)
.+.....|.+.+..+ .++...+-. .||||+|.|+..+... .+.. ..++ ...+++..+++||=++++|+|+.+.+
T Consensus 194 Np~Nl~~f~~sy~~R-~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klae 270 (283)
T PF03096_consen 194 NPKNLALFLNSYNSR-TDLSIERPSLGCPVLLVVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAE 270 (283)
T ss_dssp THHHHHHHHHHHHT------SECTTCCS-EEEEEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHH
T ss_pred CHHHHHHHHHHHhcc-ccchhhcCCCCCCeEEEEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHH
Confidence 222333343332211 222222211 2999999999987643 2222 2333 33578999999999999999999999
Q ss_pred HHHHHHHhc
Q 025026 235 LVESFVTRH 243 (259)
Q Consensus 235 ~i~~fl~~~ 243 (259)
.++=|++..
T Consensus 271 a~~lFlQG~ 279 (283)
T PF03096_consen 271 AFKLFLQGM 279 (283)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHccC
Confidence 999999864
No 62
>PRK13604 luxD acyl transferase; Provisional
Probab=99.59 E-value=2.4e-14 Score=118.21 Aligned_cols=74 Identities=12% Similarity=-0.008 Sum_probs=53.2
Q ss_pred CCCeEEEeCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 5 KSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 5 ~~~~via~Dl~G~-G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
.+|.|+.+|.+|| |.|+..- ..+++....+|+.+.++.+ +.+++.|+||||||.+|+..|...+ |+.
T Consensus 63 ~G~~vLrfD~rg~~GeS~G~~-------~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~--v~~ 133 (307)
T PRK13604 63 NGFHVIRYDSLHHVGLSSGTI-------DEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEID--LSF 133 (307)
T ss_pred CCCEEEEecCCCCCCCCCCcc-------ccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCC--CCE
Confidence 5799999999998 9996521 1233344456775554444 5678999999999999977777543 888
Q ss_pred eEEeccc
Q 025026 81 MILLNIS 87 (259)
Q Consensus 81 lvli~~~ 87 (259)
+|+.++.
T Consensus 134 lI~~sp~ 140 (307)
T PRK13604 134 LITAVGV 140 (307)
T ss_pred EEEcCCc
Confidence 8887653
No 63
>PRK10566 esterase; Provisional
Probab=99.58 E-value=8.3e-14 Score=113.69 Aligned_cols=57 Identities=19% Similarity=0.141 Sum_probs=42.8
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCCCC------cccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNFDS------VEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~~~------~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
.+|+|+|+|++|.++|.+.+..+.+..+ +.++++++++||... |+ ..+.+.+||++.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHHHHHhh
Confidence 4899999999999999988766554221 357788999999853 44 557777788753
No 64
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.54 E-value=2.9e-14 Score=116.75 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=64.1
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC---KDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l---~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.+|+|+++|+||||+|+... ..++++.+++|+.+++ ++.+.++++|+||||||.+++.+|.++|++++++
T Consensus 55 ~Gy~Vl~~Dl~G~G~S~g~~-------~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~l 127 (266)
T TIGR03101 55 GGFGVLQIDLYGCGDSAGDF-------AAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRL 127 (266)
T ss_pred CCCEEEEECCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceE
Confidence 46999999999999997532 2357888888877754 4456789999999999999999999999999999
Q ss_pred EEeccc
Q 025026 82 ILLNIS 87 (259)
Q Consensus 82 vli~~~ 87 (259)
|++++.
T Consensus 128 VL~~P~ 133 (266)
T TIGR03101 128 VLWQPV 133 (266)
T ss_pred EEeccc
Confidence 999864
No 65
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=6.9e-13 Score=110.27 Aligned_cols=228 Identities=21% Similarity=0.236 Sum_probs=129.7
Q ss_pred CCCeEEEeCCCCCC-CCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHhcCCCEE-EEEeCcchHHHHHHHhhCcc
Q 025026 5 KSHRVYSIDLIGYG-YSDKPNPRDFF------DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAVMEPE 76 (259)
Q Consensus 5 ~~~~via~Dl~G~G-~S~~~~~~~~~------~~~~y~~~~~a~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~ 76 (259)
++|.||++|-.|.+ .|..|...... +-..+|+.|+++--..++++||++++. +||-|||||.|++++..|||
T Consensus 91 ~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 91 ERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred cceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH
Confidence 46999999999987 55554422211 112478889998778889999999866 99999999999999999999
Q ss_pred cccceEEeccchhhhh------------ccCCC-CCCcch-----H-HHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhh
Q 025026 77 ICRGMILLNISLRMLH------------IKKQP-WYGRPL-----I-RSFQNLLRNTAAGKLFYKMVATSESVRNILCQC 137 (259)
Q Consensus 77 ~v~~lvli~~~~~~~~------------~~~~~-~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (259)
+|++++.+.++++... +...| |.+..+ . +.+. +.+. ++..-|. ++..+. +.
T Consensus 171 ~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~-~AR~--l~~ltYr---S~~~~~----~r 240 (368)
T COG2021 171 RVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLR-LARM--LAHLTYR---SEEELD----ER 240 (368)
T ss_pred HHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHH-HHHH--HHHHHcc---CHHHHH----HH
Confidence 9999999988654310 00011 100000 0 0000 0000 0000000 111111 11
Q ss_pred cCC-----CCC--CcHHHHHHHhcccc----CcchHHHHHHHH-HhhCCCCccc------cCC--CCCeEEEecCCCCCC
Q 025026 138 YND-----TSQ--VTEELVEKILQPGL----ETGAADVFLEFI-CYSGGPLPEE------LLP--QCPVLIAWGDKDPWE 197 (259)
Q Consensus 138 ~~~-----~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~------~~~--~~PvliI~G~~D~~~ 197 (259)
+.+ ... .....++.+++... ..-..+.++.+. .....+.... .+. ++|+|++.=+.|.++
T Consensus 241 F~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lf 320 (368)
T COG2021 241 FGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLF 320 (368)
T ss_pred hcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccC
Confidence 111 000 00112233222110 000011111110 1111111111 122 299999999999999
Q ss_pred CchhhhhhcCCCCccc-E-EEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 198 PIELGRAYGNFDSVED-F-IVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 198 ~~~~~~~~~~~~~~~~-~-~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
|++....+.+.++.+. + ++-...||--++...+.+...|..||+.
T Consensus 321 p~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 321 PPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 9998877766655444 4 5667889999999999999999999964
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=9.8e-13 Score=103.59 Aligned_cols=200 Identities=15% Similarity=0.131 Sum_probs=116.0
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhcCCCEEEEEeCcchHHHHHHHhhCcc---c
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK-DVVKDQAFFICNSIGGLVGLQAAVMEPE---I 77 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~-~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~ 77 (259)
.|+....++++.+||+|.--.- +-..+++.+++.|..-+. -+...++.+.||||||+||+++|.+... .
T Consensus 29 ~lp~~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~ 101 (244)
T COG3208 29 RLPADIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP 101 (244)
T ss_pred hCCchhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC
Confidence 3566788999999999964221 134689999999887777 3445689999999999999999987533 2
Q ss_pred ccceEEeccchhhhhccCCCCCCcc---hHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 025026 78 CRGMILLNISLRMLHIKKQPWYGRP---LIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (259)
Q Consensus 78 v~~lvli~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (259)
+..+.+.+..++..... ....... +++.+..+-..+ ..++ .++|+.+-++
T Consensus 102 p~~lfisg~~aP~~~~~-~~i~~~~D~~~l~~l~~lgG~p---~e~l----------------------ed~El~~l~L- 154 (244)
T COG3208 102 PRALFISGCRAPHYDRG-KQIHHLDDADFLADLVDLGGTP---PELL----------------------EDPELMALFL- 154 (244)
T ss_pred cceEEEecCCCCCCccc-CCccCCCHHHHHHHHHHhCCCC---hHHh----------------------cCHHHHHHHH-
Confidence 55666555443311110 0000000 111111000000 0000 0122222111
Q ss_pred cccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCC-CcccEEEcCCCCCCCCCCChhhHH
Q 025026 155 PGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCPQDEAPHLVN 233 (259)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~GH~~~~e~p~~~~ 233 (259)
|.-..-+...-.|. ......-.||+.++.|++|..+..+.....++.- ..-+++.++ +||+...++.+++.
T Consensus 155 ----PilRAD~~~~e~Y~---~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~ 226 (244)
T COG3208 155 ----PILRADFRALESYR---YPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVL 226 (244)
T ss_pred ----HHHHHHHHHhcccc---cCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHH
Confidence 10000011100111 1111112499999999999999888766555543 246788887 59999999999999
Q ss_pred HHHHHHHHhc
Q 025026 234 PLVESFVTRH 243 (259)
Q Consensus 234 ~~i~~fl~~~ 243 (259)
+.|.+.+...
T Consensus 227 ~~i~~~l~~~ 236 (244)
T COG3208 227 ARLEQHLAHH 236 (244)
T ss_pred HHHHHHhhhh
Confidence 9999988643
No 67
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.44 E-value=8.2e-13 Score=104.71 Aligned_cols=165 Identities=17% Similarity=0.198 Sum_probs=103.9
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
+++|+++|..|+|.|...+. ..-..+| ++-+.+++++-. .++++|.|+|+|+.....+|++.| ++++|+
T Consensus 88 n~nv~~~DYSGyG~S~G~ps------E~n~y~D-i~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPS------ERNLYAD-IKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCcc------cccchhh-HHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 69999999999999976431 1112222 222334444433 578999999999999999999999 999999
Q ss_pred eccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHH
Q 025026 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (259)
Q Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
.++-. +..+. ++..... .. +.+.
T Consensus 159 ~SPf~-----------------S~~rv---------~~~~~~~---------~~----------~~d~------------ 181 (258)
T KOG1552|consen 159 HSPFT-----------------SGMRV---------AFPDTKT---------TY----------CFDA------------ 181 (258)
T ss_pred eccch-----------------hhhhh---------hccCcce---------EE----------eecc------------
Confidence 77411 00000 0000000 00 0000
Q ss_pred HHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCC-CCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 164 VFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
| .. +..=..-+||||+|+|++|.+++...+.++-+. ....+..++.|+||.-.+ .+.++.+.+..|+..
T Consensus 182 -f------~~--i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~-~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 182 -F------PN--IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIE-LYPEYIEHLRRFISS 251 (258)
T ss_pred -c------cc--cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccc-cCHHHHHHHHHHHHH
Confidence 0 00 000001249999999999999999988875444 333477899999996544 555677788888876
Q ss_pred cCCC
Q 025026 243 HATP 246 (259)
Q Consensus 243 ~~~~ 246 (259)
....
T Consensus 252 ~~~~ 255 (258)
T KOG1552|consen 252 VLPS 255 (258)
T ss_pred hccc
Confidence 5544
No 68
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.42 E-value=7.9e-13 Score=114.65 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=65.2
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
.+|+||++|++|||.|..+.. .. ....+++++.++++.| +++++|||||||||.||..++.++|++|
T Consensus 72 ~d~nVI~VDw~g~g~s~y~~a------~~-~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV 144 (442)
T TIGR03230 72 PSANVIVVDWLSRAQQHYPTS------AA-YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKV 144 (442)
T ss_pred CCCEEEEEECCCcCCCCCccc------cc-cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcce
Confidence 369999999999999875421 22 3467778888888865 3689999999999999999999999999
Q ss_pred cceEEeccchhh
Q 025026 79 RGMILLNISLRM 90 (259)
Q Consensus 79 ~~lvli~~~~~~ 90 (259)
.+++++|++.+.
T Consensus 145 ~rItgLDPAgP~ 156 (442)
T TIGR03230 145 NRITGLDPAGPT 156 (442)
T ss_pred eEEEEEcCCCCc
Confidence 999999986543
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.40 E-value=4e-12 Score=101.42 Aligned_cols=187 Identities=18% Similarity=0.233 Sum_probs=104.5
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCEEEEEeCcchHHHHHHHhhCccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
+++|.|+.+|.||.+.....--. ........ .-.+|+.+.++.+. .+++.++|||+||.++..++.++|++
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~--~~~~~~~~-~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~ 88 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHE--AGRGDWGQ-ADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDR 88 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHH--TTTTGTTH-HHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCG
T ss_pred hCCEEEEEEcCCCCCccchhHHH--hhhccccc-cchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccccee
Confidence 57899999999998853221000 00011122 23455666655552 25899999999999999999999999
Q ss_pred ccceEEeccchhhhhccCCCCCC-cchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccc
Q 025026 78 CRGMILLNISLRMLHIKKQPWYG-RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (259)
Q Consensus 78 v~~lvli~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (259)
++.+|..++..... .... ... +.. . ... .+..... .++..+..
T Consensus 89 f~a~v~~~g~~d~~-----~~~~~~~~---~~~----~-----------------~~~--~~~~~~~-~~~~~~~~---- 132 (213)
T PF00326_consen 89 FKAAVAGAGVSDLF-----SYYGTTDI---YTK----A-----------------EYL--EYGDPWD-NPEFYREL---- 132 (213)
T ss_dssp SSEEEEESE-SSTT-----CSBHHTCC---HHH----G-----------------HHH--HHSSTTT-SHHHHHHH----
T ss_pred eeeeeccceecchh-----cccccccc---ccc----c-----------------ccc--ccCccch-hhhhhhhh----
Confidence 99998877532111 0000 000 000 0 000 0111100 11111110
Q ss_pred cCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhh----cCCCCcccEEEcCCCCCCCC-CCChhh
Q 025026 157 LETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQ-DEAPHL 231 (259)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~GH~~~-~e~p~~ 231 (259)
.... .. .....++|+|+++|++|..+|.+.+..+ .+.....+++++|++||... -+....
T Consensus 133 ------------s~~~--~~-~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 133 ------------SPIS--PA-DNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp ------------HHGG--GG-GGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHH
T ss_pred ------------cccc--cc-ccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHH
Confidence 0000 00 0001348999999999999998876553 33333479999999999544 444557
Q ss_pred HHHHHHHHHHhcC
Q 025026 232 VNPLVESFVTRHA 244 (259)
Q Consensus 232 ~~~~i~~fl~~~~ 244 (259)
..+.+.+|+++..
T Consensus 198 ~~~~~~~f~~~~l 210 (213)
T PF00326_consen 198 WYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8888889998754
No 70
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.37 E-value=1.7e-12 Score=96.77 Aligned_cols=120 Identities=24% Similarity=0.352 Sum_probs=83.4
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEe
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli 84 (259)
.+|.|+++|+||+|.+... ....++.+++. ......+++.|+|||+||.+++.++.+. .+|+++|++
T Consensus 25 ~G~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~ 91 (145)
T PF12695_consen 25 QGYAVVAFDYPGHGDSDGA----------DAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLL 91 (145)
T ss_dssp TTEEEEEESCTTSTTSHHS----------HHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEE
T ss_pred CCCEEEEEecCCCCccchh----------HHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEe
Confidence 5699999999999998431 12333333322 1112557899999999999999999998 789999998
Q ss_pred ccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHH
Q 025026 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (259)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (259)
++. . . .+.+
T Consensus 92 ~~~-----------~------------~--------------~~~~---------------------------------- 100 (145)
T PF12695_consen 92 SPY-----------P------------D--------------SEDL---------------------------------- 100 (145)
T ss_dssp SES-----------S------------G--------------CHHH----------------------------------
T ss_pred cCc-----------c------------c--------------hhhh----------------------------------
Confidence 741 0 0 0000
Q ss_pred HHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcC-CCCcccEEEcCCCCCC
Q 025026 165 FLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHC 223 (259)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~GH~ 223 (259)
. ..++|+++|+|++|..++.+..+.+.+ .....+++++++++|+
T Consensus 101 -------~--------~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 -------A--------KIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -------T--------TTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -------h--------ccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0 013699999999999999887766433 3445799999999995
No 71
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.35 E-value=1.3e-10 Score=102.83 Aligned_cols=211 Identities=13% Similarity=0.120 Sum_probs=116.6
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHH----HHhhC
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQ----AAVME 74 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~----~a~~~ 74 (259)
+..+|+|+.+|.++-|.+++ .+++++|++.|.+.++.. |.++++++||++||.++.. +|+++
T Consensus 244 v~qG~~VflIsW~nP~~~~r----------~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~ 313 (560)
T TIGR01839 244 LKNQLQVFIISWRNPDKAHR----------EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG 313 (560)
T ss_pred HHcCCeEEEEeCCCCChhhc----------CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC
Confidence 45789999999999776643 468999998888888776 4578999999999999997 88899
Q ss_pred cc-cccceEEeccchhhhhcc-CCCCCCcchHHHHHHHHhhh-----hHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHH
Q 025026 75 PE-ICRGMILLNISLRMLHIK-KQPWYGRPLIRSFQNLLRNT-----AAGKLFYKMVATSESVRNILCQCYNDTSQVTEE 147 (259)
Q Consensus 75 p~-~v~~lvli~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (259)
++ +|++++++.+........ ...+........+....... ......|+.+.....+.......+.........
T Consensus 314 ~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~f 393 (560)
T TIGR01839 314 QLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAF 393 (560)
T ss_pred CCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchh
Confidence 86 899999987654321110 00011111111111111110 112234555444444433322222111111111
Q ss_pred HHHHHhccccC-cchHH-HHHHHHHhhCCCCcc--c--------cCCC--CCeEEEecCCCCCCCchhhhhhcCCCC-cc
Q 025026 148 LVEKILQPGLE-TGAAD-VFLEFICYSGGPLPE--E--------LLPQ--CPVLIAWGDKDPWEPIELGRAYGNFDS-VE 212 (259)
Q Consensus 148 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~--~--------~~~~--~PvliI~G~~D~~~~~~~~~~~~~~~~-~~ 212 (259)
.+..+...... ++... .+++++ ....+.. . .+.+ ||+++|.|+.|.++|++.+....++.. ..
T Consensus 394 dll~Wn~D~t~lPg~~~~e~l~ly--~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~ 471 (560)
T TIGR01839 394 DILYWNNDTTRLPAAFHGDLLDMF--KSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKR 471 (560)
T ss_pred hHHHHhCcCccchHHHHHHHHHHH--hcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCe
Confidence 12222222111 22211 122222 2222211 0 1223 999999999999999998877666543 34
Q ss_pred cEEEcCCCCCCCCC
Q 025026 213 DFIVLPNVGHCPQD 226 (259)
Q Consensus 213 ~~~~i~~~GH~~~~ 226 (259)
++ ++-++||.--+
T Consensus 472 ~f-vl~~gGHIggi 484 (560)
T TIGR01839 472 RF-VLSNSGHIQSI 484 (560)
T ss_pred EE-EecCCCccccc
Confidence 55 44568997443
No 72
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.34 E-value=1.4e-11 Score=94.66 Aligned_cols=189 Identities=18% Similarity=0.190 Sum_probs=110.5
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-C--EEEEEeCcchHHHHHHHhhCcccccce
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-Q--AFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~-~--~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
..+.++-+|.+|.|.|+..- .... +...|+||..++..+... + .+++|||-||-+++.+|+++++ ++-+
T Consensus 61 ~gis~fRfDF~GnGeS~gsf-----~~Gn--~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~v 132 (269)
T KOG4667|consen 61 EGISAFRFDFSGNGESEGSF-----YYGN--YNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNV 132 (269)
T ss_pred cCceEEEEEecCCCCcCCcc-----ccCc--ccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chhe
Confidence 46899999999999997632 1233 345569999999998643 3 5699999999999999999988 6666
Q ss_pred EEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcch
Q 025026 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (259)
Q Consensus 82 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (259)
|-..+... .+..+ .. ..++.++.++....++..--.+. .....++++-....+.
T Consensus 133 iNcsGRyd----------l~~~I---~e-----Rlg~~~l~~ike~Gfid~~~rkG-~y~~rvt~eSlmdrLn------- 186 (269)
T KOG4667|consen 133 INCSGRYD----------LKNGI---NE-----RLGEDYLERIKEQGFIDVGPRKG-KYGYRVTEESLMDRLN------- 186 (269)
T ss_pred EEcccccc----------hhcch---hh-----hhcccHHHHHHhCCceecCcccC-CcCceecHHHHHHHHh-------
Confidence 54433210 01111 00 01111111111100000000000 0011122222111110
Q ss_pred HHHHHHHHHhhCCCCccc--cCC-CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHH
Q 025026 162 ADVFLEFICYSGGPLPEE--LLP-QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 238 (259)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~--~~~-~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~ 238 (259)
+++.++ .+. +||||-++|..|.++|.+.++.+++.+|+-++++|+|+.|.--..+.+ .+.+...
T Consensus 187 ------------td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~-l~~lgl~ 253 (269)
T KOG4667|consen 187 ------------TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQ-LVSLGLE 253 (269)
T ss_pred ------------chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhh-Hhhhcce
Confidence 111111 123 399999999999999999999999988888999999999986554433 3344444
Q ss_pred HH
Q 025026 239 FV 240 (259)
Q Consensus 239 fl 240 (259)
|.
T Consensus 254 f~ 255 (269)
T KOG4667|consen 254 FI 255 (269)
T ss_pred eE
Confidence 44
No 73
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.33 E-value=4.8e-11 Score=95.99 Aligned_cols=76 Identities=25% Similarity=0.354 Sum_probs=67.5
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
.+.|+|.+.+||+|.++.+. ...|+-.+-..-+.++++.++++ +.+++|||.|+-.|+.+|..+| +.|+++
T Consensus 61 ~~iR~I~iN~PGf~~t~~~~------~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~l 132 (297)
T PF06342_consen 61 AGIRFIGINYPGFGFTPGYP------DQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVL 132 (297)
T ss_pred cCeEEEEeCCCCCCCCCCCc------ccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEE
Confidence 46899999999999998764 25689999999999999999985 7999999999999999999997 679999
Q ss_pred eccch
Q 025026 84 LNISL 88 (259)
Q Consensus 84 i~~~~ 88 (259)
+++..
T Consensus 133 in~~G 137 (297)
T PF06342_consen 133 INPPG 137 (297)
T ss_pred ecCCc
Confidence 99753
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.29 E-value=3e-10 Score=94.20 Aligned_cols=82 Identities=13% Similarity=0.170 Sum_probs=57.8
Q ss_pred CCeEEEeCC--CCCCCCCCCCC-------------CCCCCCCCCCHHHH-HHHHHHHHHH---hcCCCEEEEEeCcchHH
Q 025026 6 SHRVYSIDL--IGYGYSDKPNP-------------RDFFDKPFYTFETW-ASQLNDFCKD---VVKDQAFFICNSIGGLV 66 (259)
Q Consensus 6 ~~~via~Dl--~G~G~S~~~~~-------------~~~~~~~~y~~~~~-a~dl~~~l~~---l~~~~~~lvGhS~Gg~i 66 (259)
++.|++||. +|+|.+..... ........|+..++ +++|..++++ ++.+++.++||||||.+
T Consensus 72 g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~ 151 (275)
T TIGR02821 72 GLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHG 151 (275)
T ss_pred CcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHH
Confidence 699999998 56654431100 00000012444444 6788888887 34568999999999999
Q ss_pred HHHHHhhCcccccceEEeccc
Q 025026 67 GLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 67 a~~~a~~~p~~v~~lvli~~~ 87 (259)
++.++.++|+++++++.+++.
T Consensus 152 a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 152 ALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHhCcccceEEEEECCc
Confidence 999999999999999988754
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.23 E-value=3.3e-10 Score=94.34 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 36 FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
.+++.+.+...++.++.++++|+||||||..|+.++.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 3444445555555567789999999999999999999999999999988764
No 76
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.21 E-value=1.9e-10 Score=98.85 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=64.2
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhC-----ccc
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-----PEI 77 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~ 77 (259)
|. ++.||..|..--+..+.. ...+++++|++-|.++++++|.+ ++|+|+++||..++.+++.+ |++
T Consensus 127 l~-g~dVYl~DW~~p~~vp~~-------~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~ 197 (406)
T TIGR01849 127 LP-DHDVYITDWVNARMVPLS-------AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQ 197 (406)
T ss_pred hC-CCcEEEEeCCCCCCCchh-------cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCC
Confidence 55 899999999888866422 14689999999999999999876 99999999999977766654 778
Q ss_pred ccceEEeccchh
Q 025026 78 CRGMILLNISLR 89 (259)
Q Consensus 78 v~~lvli~~~~~ 89 (259)
+++++++.++..
T Consensus 198 ~~sltlm~~PID 209 (406)
T TIGR01849 198 PRSMTLMGGPID 209 (406)
T ss_pred cceEEEEecCcc
Confidence 999999987543
No 77
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.16 E-value=4.1e-11 Score=99.18 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=61.7
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
.+|+|+++|++|++.+..+. ..+++..+++++.++++.+ +.++++||||||||.||..++.++|++|
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~-------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v 137 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQ-------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL 137 (275)
T ss_pred CCCEEEEEECccccccChHH-------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc
Confidence 46999999999985443211 1245666677777777765 3468999999999999999999999999
Q ss_pred cceEEeccchhh
Q 025026 79 RGMILLNISLRM 90 (259)
Q Consensus 79 ~~lvli~~~~~~ 90 (259)
.+++.++++.+.
T Consensus 138 ~~iv~LDPa~p~ 149 (275)
T cd00707 138 GRITGLDPAGPL 149 (275)
T ss_pred ceeEEecCCccc
Confidence 999999976543
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.12 E-value=7.6e-09 Score=85.20 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=45.7
Q ss_pred CCeEEEecCCCCCCCchhhhhhcC-CCCcccEEEcCCCCCCCCCC----Chh-hHHHHHHHHHHh
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDE----APH-LVNPLVESFVTR 242 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~GH~~~~e----~p~-~~~~~i~~fl~~ 242 (259)
+|+|||+..+|++++.+.-..... ..|++.+..-+.+||.-.+. +|. ..-+.+.+|++.
T Consensus 275 ~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 275 KPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999999999999998865544333 57888999999999998877 454 445666777764
No 79
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.12 E-value=1.4e-10 Score=89.35 Aligned_cols=171 Identities=16% Similarity=0.201 Sum_probs=104.4
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
+.+|+.++.||||+|+..+.. .. +. -|-.+.++.+. ..|.+|.|-|+||.+|..+|++..+++.
T Consensus 106 ~mnv~ivsYRGYG~S~GspsE----~G---L~---lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~ 175 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPSE----EG---LK---LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRIS 175 (300)
T ss_pred CceEEEEEeeccccCCCCccc----cc---ee---ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhhee
Confidence 578999999999999864321 11 21 12234444442 3479999999999999999999999999
Q ss_pred ceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCc
Q 025026 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (259)
Q Consensus 80 ~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (259)
++++-|+-..-+ +.... .+|.. ....+.....+ +.+
T Consensus 176 ~~ivENTF~SIp-------------~~~i~---------~v~p~--~~k~i~~lc~k-------------n~~------- 211 (300)
T KOG4391|consen 176 AIIVENTFLSIP-------------HMAIP---------LVFPF--PMKYIPLLCYK-------------NKW------- 211 (300)
T ss_pred eeeeechhccch-------------hhhhh---------eeccc--hhhHHHHHHHH-------------hhh-------
Confidence 999877411000 00000 00000 00000000000 000
Q ss_pred chHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCCC--cccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 160 GAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
.+++ .+. ..+.|.|+|.|..|.++|+.+.+.+-..-| .-++..+|++.|.=-+- -+-.-++|+
T Consensus 212 ---------~S~~--ki~---~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~ 276 (300)
T KOG4391|consen 212 ---------LSYR--KIG---QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIE 276 (300)
T ss_pred ---------cchh--hhc---cccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHH
Confidence 0000 000 123899999999999999988777555432 34799999999975542 345778999
Q ss_pred HHHHhcCC
Q 025026 238 SFVTRHAT 245 (259)
Q Consensus 238 ~fl~~~~~ 245 (259)
+||.+...
T Consensus 277 dFlaE~~~ 284 (300)
T KOG4391|consen 277 DFLAEVVK 284 (300)
T ss_pred HHHHHhcc
Confidence 99987654
No 80
>PRK11460 putative hydrolase; Provisional
Probab=99.11 E-value=1.5e-09 Score=87.71 Aligned_cols=55 Identities=11% Similarity=0.167 Sum_probs=38.3
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcC----CCCcccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
..|+++++|++|+++|.+.+..+.+ ....+++++++++||....+.-+.+.+-+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 3799999999999999887665433 223468888999999875433333333333
No 81
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.10 E-value=3.7e-09 Score=85.10 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=63.4
Q ss_pred cCCC-CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEeCcchHHHHHHHhhC---ccc
Q 025026 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVME---PEI 77 (259)
Q Consensus 3 L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~---p~~ 77 (259)
|.+. +.|++++.||++....+ ..++++++++..+.|.....+ ++.|+|||+||.||+++|.+- -..
T Consensus 23 l~~~~~~v~~i~~~~~~~~~~~---------~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~ 93 (229)
T PF00975_consen 23 LPDDVIGVYGIEYPGRGDDEPP---------PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEE 93 (229)
T ss_dssp HTTTEEEEEEECSTTSCTTSHE---------ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-S
T ss_pred CCCCeEEEEEEecCCCCCCCCC---------CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhc
Confidence 5565 89999999999944332 348999999999888887665 999999999999999999874 345
Q ss_pred ccceEEeccchh
Q 025026 78 CRGMILLNISLR 89 (259)
Q Consensus 78 v~~lvli~~~~~ 89 (259)
|..|+++|+.++
T Consensus 94 v~~l~liD~~~p 105 (229)
T PF00975_consen 94 VSRLILIDSPPP 105 (229)
T ss_dssp ESEEEEESCSST
T ss_pred cCceEEecCCCC
Confidence 999999997543
No 82
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.09 E-value=4.7e-09 Score=86.47 Aligned_cols=85 Identities=19% Similarity=0.263 Sum_probs=68.8
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCEEEEEeCcchHHHHHHHhhCc-
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP- 75 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p- 75 (259)
|..++.|++..+.||-.++...... .....|+++++++.-.++++++-. .+++|+|||+|++|++++..+.|
T Consensus 29 l~~~~~i~~ish~Gh~~~~~~~~~~-~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~ 107 (266)
T PF10230_consen 29 LNPQFEILGISHAGHSTSPSNSKFS-PNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD 107 (266)
T ss_pred CCCCCeeEEecCCCCcCCccccccc-CCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc
Confidence 4568999999999999887642100 113579999999998888888743 36999999999999999999999
Q ss_pred --ccccceEEeccch
Q 025026 76 --EICRGMILLNISL 88 (259)
Q Consensus 76 --~~v~~lvli~~~~ 88 (259)
.+|.+++++-++.
T Consensus 108 ~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 108 LKFRVKKVILLFPTI 122 (266)
T ss_pred cCCceeEEEEeCCcc
Confidence 7899999987654
No 83
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.06 E-value=1.6e-08 Score=89.53 Aligned_cols=80 Identities=16% Similarity=0.100 Sum_probs=58.7
Q ss_pred CCCCeEEEeCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCEEEEEeCcchHHHHHHHhhC-
Q 025026 4 AKSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME- 74 (259)
Q Consensus 4 ~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~- 74 (259)
.+...++.+|+| |+|.|..... ....+.++.++|+.++++.+ +..+++|+|||+||.++..+|.+-
T Consensus 119 ~~~~~~l~iDqP~G~G~S~~~~~-----~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 119 NNEAYVIYVDQPAGVGFSYADKA-----DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred ccccCeEEEeCCCCcCcccCCCC-----CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 356889999986 8888864221 12345688899999998854 346899999999999998887752
Q ss_pred ---------cccccceEEeccch
Q 025026 75 ---------PEICRGMILLNISL 88 (259)
Q Consensus 75 ---------p~~v~~lvli~~~~ 88 (259)
+-.++|+++.|+..
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred hhccccCCceeeeEEEEEecccc
Confidence 12478998888643
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.05 E-value=2.8e-09 Score=85.23 Aligned_cols=124 Identities=24% Similarity=0.287 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHh---cC--CCEEEEEeCcchHHHHHHHhhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHH
Q 025026 36 FETWASQLNDFCKDV---VK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l---~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (259)
+...++.|.++++.. ++ ++++|.|+|.||++|+.+++++|+.+.++|.+++.....
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~------------------- 143 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE------------------- 143 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG-------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc-------------------
Confidence 444445566666543 23 479999999999999999999999999999988632100
Q ss_pred HhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEe
Q 025026 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAW 190 (259)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~ 190 (259)
.. .. . . .....++|+++++
T Consensus 144 --~~-----------~~--------~---------------------------------------~-~~~~~~~pi~~~h 162 (216)
T PF02230_consen 144 --SE-----------LE--------D---------------------------------------R-PEALAKTPILIIH 162 (216)
T ss_dssp --CC-----------CH--------C---------------------------------------C-HCCCCTS-EEEEE
T ss_pred --cc-----------cc--------c---------------------------------------c-ccccCCCcEEEEe
Confidence 00 00 0 0 0001258999999
Q ss_pred cCCCCCCCchhhhh----hcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 025026 191 GDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 191 G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
|++|+++|.+.++. +.+...+.+++.+++.||-+ +.+..+.+.+||+++
T Consensus 163 G~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i----~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 163 GDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI----SPEELRDLREFLEKH 215 (216)
T ss_dssp ETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred cCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC----CHHHHHHHHHHHhhh
Confidence 99999999876654 44444567999999999944 556666788898764
No 85
>PLN00021 chlorophyllase
Probab=99.02 E-value=7.3e-09 Score=87.17 Aligned_cols=74 Identities=15% Similarity=0.045 Sum_probs=49.3
Q ss_pred cCC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHH-------hcCCCEEEEEeCcchHHHHHHH
Q 025026 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFET---WASQLNDFCKD-------VVKDQAFFICNSIGGLVGLQAA 71 (259)
Q Consensus 3 L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~---~a~dl~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a 71 (259)
|++ +|.|+++|++|++.+... ..+++ ..+.+.+.++. .+.++++|+|||+||.+|+.+|
T Consensus 75 Las~G~~VvapD~~g~~~~~~~----------~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA 144 (313)
T PLN00021 75 IASHGFIVVAPQLYTLAGPDGT----------DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALA 144 (313)
T ss_pred HHhCCCEEEEecCCCcCCCCch----------hhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHH
Confidence 443 599999999997643211 12322 22223222222 2346899999999999999999
Q ss_pred hhCcc-----cccceEEecc
Q 025026 72 VMEPE-----ICRGMILLNI 86 (259)
Q Consensus 72 ~~~p~-----~v~~lvli~~ 86 (259)
.++|+ +++++|++++
T Consensus 145 ~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 145 LGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred hhccccccccceeeEEeecc
Confidence 99885 5778887764
No 86
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.00 E-value=2.6e-08 Score=99.23 Aligned_cols=77 Identities=13% Similarity=0.027 Sum_probs=66.4
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCEEEEEeCcchHHHHHHHhh---Cccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVM---EPEI 77 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~---~p~~ 77 (259)
.|+.+++|+++|+||+|.+.. ..++++++++++.+.++.+.. .+++++||||||+||+++|.+ .|++
T Consensus 1090 ~l~~~~~v~~~~~~g~~~~~~---------~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~ 1160 (1296)
T PRK10252 1090 YLDPQWSIYGIQSPRPDGPMQ---------TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEE 1160 (1296)
T ss_pred hcCCCCcEEEEECCCCCCCCC---------CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCc
Confidence 467789999999999997632 347999999999999998765 489999999999999999996 5788
Q ss_pred ccceEEeccc
Q 025026 78 CRGMILLNIS 87 (259)
Q Consensus 78 v~~lvli~~~ 87 (259)
|..++++++.
T Consensus 1161 v~~l~l~~~~ 1170 (1296)
T PRK10252 1161 VAFLGLLDTW 1170 (1296)
T ss_pred eeEEEEecCC
Confidence 9999999864
No 87
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.96 E-value=2e-08 Score=86.04 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=93.5
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
..++.++++|.||.|.|..-..+ ..+ +.+-..|...+.... ..++.++|.|+||.+|.++|..+++||++
T Consensus 216 ~rGiA~LtvDmPG~G~s~~~~l~-----~D~--~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlka 288 (411)
T PF06500_consen 216 PRGIAMLTVDMPGQGESPKWPLT-----QDS--SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKA 288 (411)
T ss_dssp HCT-EEEEE--TTSGGGTTT-S------S-C--CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SE
T ss_pred hCCCEEEEEccCCCcccccCCCC-----cCH--HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceee
Confidence 36799999999999998642111 112 234444555555543 34899999999999999999999999999
Q ss_pred eEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHH-HHHhccccCc
Q 025026 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV-EKILQPGLET 159 (259)
Q Consensus 81 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 159 (259)
+|..++..-.. ........+.+. .....+..+.+.. ..+.+.+ ..+ .
T Consensus 289 vV~~Ga~vh~~------------ft~~~~~~~~P~-------------my~d~LA~rlG~~-~~~~~~l~~el-~----- 336 (411)
T PF06500_consen 289 VVALGAPVHHF------------FTDPEWQQRVPD-------------MYLDVLASRLGMA-AVSDESLRGEL-N----- 336 (411)
T ss_dssp EEEES---SCG------------GH-HHHHTTS-H-------------HHHHHHHHHCT-S-CE-HHHHHHHG-G-----
T ss_pred EeeeCchHhhh------------hccHHHHhcCCH-------------HHHHHHHHHhCCc-cCCHHHHHHHH-H-----
Confidence 99987642110 101010001000 0000111111111 1122211 111 1
Q ss_pred chHHHHHHHHHhhCCCCccccC--C--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHH
Q 025026 160 GAADVFLEFICYSGGPLPEELL--P--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 235 (259)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~--~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 235 (259)
.++. ...-.+ . .+|+|.|.|++|+++|.+....+.....+.+...|+... ++ +.-+.-+..
T Consensus 337 ----------~~SL--k~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~--~~-~gy~~al~~ 401 (411)
T PF06500_consen 337 ----------KFSL--KTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP--LH-MGYPQALDE 401 (411)
T ss_dssp ----------GGST--TTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS--HH-HHHHHHHHH
T ss_pred ----------hcCc--chhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc--cc-cchHHHHHH
Confidence 1110 001122 2 289999999999999998877776665456777887654 12 222344555
Q ss_pred HHHHHHh
Q 025026 236 VESFVTR 242 (259)
Q Consensus 236 i~~fl~~ 242 (259)
+.+||++
T Consensus 402 ~~~Wl~~ 408 (411)
T PF06500_consen 402 IYKWLED 408 (411)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6667765
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.92 E-value=1.7e-09 Score=98.27 Aligned_cols=77 Identities=21% Similarity=0.113 Sum_probs=62.3
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
+++|.|+++|+||+|.|+... ..++ ...++|+.++++.+.. +++.++|||+||.+++.+|..+|++|
T Consensus 51 ~~Gy~vv~~D~RG~g~S~g~~-------~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l 122 (550)
T TIGR00976 51 AQGYAVVIQDTRGRGASEGEF-------DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPAL 122 (550)
T ss_pred hCCcEEEEEeccccccCCCce-------EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCce
Confidence 568999999999999998532 1222 4566777777776632 48999999999999999999999999
Q ss_pred cceEEeccch
Q 025026 79 RGMILLNISL 88 (259)
Q Consensus 79 ~~lvli~~~~ 88 (259)
+++|..++..
T Consensus 123 ~aiv~~~~~~ 132 (550)
T TIGR00976 123 RAIAPQEGVW 132 (550)
T ss_pred eEEeecCccc
Confidence 9999887654
No 89
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.91 E-value=1.4e-08 Score=93.46 Aligned_cols=186 Identities=19% Similarity=0.215 Sum_probs=102.7
Q ss_pred CCCCeEEEeCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCEEEEEeCcchHHHHHHHhhCccc
Q 025026 4 AKSHRVYSIDLIG---YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 4 ~~~~~via~Dl~G---~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
+.+|-|++++.|| ||+.=..... .+.....++++.+-+. ++.+.+. +++.+.|||+||..++..+...| +
T Consensus 421 ~~G~~V~~~n~RGS~GyG~~F~~~~~--~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~ 496 (620)
T COG1506 421 SAGYAVLAPNYRGSTGYGREFADAIR--GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-R 496 (620)
T ss_pred cCCeEEEEeCCCCCCccHHHHHHhhh--hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-h
Confidence 4679999999995 4443111100 0112235666655554 5555553 38999999999999999999999 5
Q ss_pred ccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcccc
Q 025026 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (259)
Q Consensus 78 v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (259)
.+..+...+... +. ....... .. ..+ .. ......... ..+....
T Consensus 497 f~a~~~~~~~~~--------~~--------~~~~~~~-~~-~~~----~~-------~~~~~~~~~-~~~~~~~------ 540 (620)
T COG1506 497 FKAAVAVAGGVD--------WL--------LYFGEST-EG-LRF----DP-------EENGGGPPE-DREKYED------ 540 (620)
T ss_pred hheEEeccCcch--------hh--------hhccccc-hh-hcC----CH-------HHhCCCccc-ChHHHHh------
Confidence 555544432110 00 0000000 00 000 00 000000000 0111100
Q ss_pred CcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhc----CCCCcccEEEcCCCCCCCCC-CChhhH
Q 025026 158 ETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCPQD-EAPHLV 232 (259)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~GH~~~~-e~p~~~ 232 (259)
..+.......++|+|+|||+.|.-+|.+.+.++. .....++++++|+.||.+-- ++-..+
T Consensus 541 ---------------~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~ 605 (620)
T COG1506 541 ---------------RSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKV 605 (620)
T ss_pred ---------------cChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHH
Confidence 0011111113499999999999999988776643 23334799999999999776 445567
Q ss_pred HHHHHHHHHhcC
Q 025026 233 NPLVESFVTRHA 244 (259)
Q Consensus 233 ~~~i~~fl~~~~ 244 (259)
.+.+.+|++++.
T Consensus 606 ~~~~~~~~~~~~ 617 (620)
T COG1506 606 LKEILDWFKRHL 617 (620)
T ss_pred HHHHHHHHHHHh
Confidence 777778887754
No 90
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.88 E-value=2.4e-09 Score=93.57 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=59.5
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCccc----c
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----C 78 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~----v 78 (259)
|.+...+...||+|+|.+.+... .....++++.+.|.++.++.+.++++||||||||.++..++..+|+. |
T Consensus 117 L~~~GY~~~~dL~g~gYDwR~~~-----~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I 191 (440)
T PLN02733 117 LIKWGYKEGKTLFGFGYDFRQSN-----RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYV 191 (440)
T ss_pred HHHcCCccCCCcccCCCCccccc-----cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHh
Confidence 44444566899999999876421 01123455555555666666778999999999999999999999874 7
Q ss_pred cceEEeccch
Q 025026 79 RGMILLNISL 88 (259)
Q Consensus 79 ~~lvli~~~~ 88 (259)
+++|.++++.
T Consensus 192 ~~~I~la~P~ 201 (440)
T PLN02733 192 NSWIAIAAPF 201 (440)
T ss_pred ccEEEECCCC
Confidence 8888997653
No 91
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.84 E-value=5.4e-07 Score=76.90 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=56.0
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCEEEEEeCcchHHHHHHHhhCccc-
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEPEI- 77 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~- 77 (259)
..++|||+++..||+|.|.-..+ ..|+.. +.+|+.++++++. ..+...||.||||+|...|..+-.+.
T Consensus 151 ~~~G~r~VVfN~RG~~g~~LtTp------r~f~ag-~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~ 223 (409)
T KOG1838|consen 151 QRKGYRVVVFNHRGLGGSKLTTP------RLFTAG-WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNT 223 (409)
T ss_pred HhCCcEEEEECCCCCCCCccCCC------ceeecC-CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCC
Confidence 34679999999999999977554 344433 3567777777764 35799999999999999998875443
Q ss_pred -ccceEEecc
Q 025026 78 -CRGMILLNI 86 (259)
Q Consensus 78 -v~~lvli~~ 86 (259)
+.+.+.++.
T Consensus 224 ~l~~a~~v~~ 233 (409)
T KOG1838|consen 224 PLIAAVAVCN 233 (409)
T ss_pred CceeEEEEec
Confidence 444444544
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.83 E-value=1.9e-08 Score=77.21 Aligned_cols=125 Identities=17% Similarity=0.263 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHH-hhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhh
Q 025026 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAA-VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a-~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (259)
+.++|.+.|.+-+... .++++|||||+|+..++.++ ...+.+|++++++.+..... . ...
T Consensus 38 ~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~-----------------~-~~~ 98 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDD-----------------P-EPF 98 (171)
T ss_dssp -HHHHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGC-----------------H-HCC
T ss_pred CHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCccc-----------------c-cch
Confidence 4677776666555543 34699999999999999999 77889999999998531100 0 000
Q ss_pred hhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCC
Q 025026 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDK 193 (259)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~ 193 (259)
. + .... + ...+.. ...+|.++|.+++
T Consensus 99 ~------------~---------~~~~---f-----------------------------~~~p~~-~l~~~~~viaS~n 124 (171)
T PF06821_consen 99 P------------P---------ELDG---F-----------------------------TPLPRD-PLPFPSIVIASDN 124 (171)
T ss_dssp T------------C---------GGCC---C-----------------------------TTSHCC-HHHCCEEEEEETT
T ss_pred h------------h---------hccc---c-----------------------------ccCccc-ccCCCeEEEEcCC
Confidence 0 0 0000 0 000000 0127889999999
Q ss_pred CCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHH
Q 025026 194 DPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 233 (259)
Q Consensus 194 D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~ 233 (259)
|+++|.+.+.++++... ++++.++++||+--.+--..+-
T Consensus 125 Dp~vp~~~a~~~A~~l~-a~~~~~~~~GHf~~~~G~~~~p 163 (171)
T PF06821_consen 125 DPYVPFERAQRLAQRLG-AELIILGGGGHFNAASGFGPWP 163 (171)
T ss_dssp BSSS-HHHHHHHHHHHT--EEEEETS-TTSSGGGTHSS-H
T ss_pred CCccCHHHHHHHHHHcC-CCeEECCCCCCcccccCCCchH
Confidence 99999999888887664 8999999999997765544433
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=98.82 E-value=4.2e-08 Score=77.21 Aligned_cols=119 Identities=22% Similarity=0.279 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhh
Q 025026 37 ETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT 114 (259)
Q Consensus 37 ~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (259)
..+++-|.++.++.++ ++++++|+|-||+|++.+.+++|+.+++++++++.....
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~----------------------- 137 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE----------------------- 137 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC-----------------------
Confidence 3344455555666676 689999999999999999999999999999876521100
Q ss_pred hHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCC
Q 025026 115 AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKD 194 (259)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D 194 (259)
. . ....+...|+++++|+.|
T Consensus 138 ------------~--------------~----------------------------------~~~~~~~~pill~hG~~D 157 (207)
T COG0400 138 ------------P--------------E----------------------------------LLPDLAGTPILLSHGTED 157 (207)
T ss_pred ------------C--------------c----------------------------------cccccCCCeEEEeccCcC
Confidence 0 0 000123489999999999
Q ss_pred CCCCchhhhhhcC----CCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 025026 195 PWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 195 ~~~~~~~~~~~~~----~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
+++|...+.++.+ ..-.++.++++ .|| +-+.+-.+.+.+|+...
T Consensus 158 pvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH----~i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 158 PVVPLALAEALAEYLTASGADVEVRWHE-GGH----EIPPEELEAARSWLANT 205 (207)
T ss_pred CccCHHHHHHHHHHHHHcCCCEEEEEec-CCC----cCCHHHHHHHHHHHHhc
Confidence 9999887765443 33456888888 899 55666666777788653
No 94
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.80 E-value=1e-07 Score=72.58 Aligned_cols=144 Identities=20% Similarity=0.244 Sum_probs=92.8
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
.+|.|+-+|+||-|+|+-.- +...-..+|... ...++....-+ .+.|.|+|+|++|++.+|.+.||. ...+
T Consensus 59 ~G~atlRfNfRgVG~S~G~f-----D~GiGE~~Da~a-aldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~i 131 (210)
T COG2945 59 RGFATLRFNFRGVGRSQGEF-----DNGIGELEDAAA-ALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFI 131 (210)
T ss_pred CCceEEeecccccccccCcc-----cCCcchHHHHHH-HHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc-ccee
Confidence 46999999999999998642 111122333322 23444444332 357899999999999999999873 2222
Q ss_pred EeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchH
Q 025026 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (259)
Q Consensus 83 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (259)
.+.+. . +. ..| .
T Consensus 132 s~~p~-----------~-------------~~---~df-s---------------------------------------- 143 (210)
T COG2945 132 SILPP-----------I-------------NA---YDF-S---------------------------------------- 143 (210)
T ss_pred eccCC-----------C-------------Cc---hhh-h----------------------------------------
Confidence 21110 0 00 000 0
Q ss_pred HHHHHHHHhhCCCCccccCC-CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHH
Q 025026 163 DVFLEFICYSGGPLPEELLP-QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 241 (259)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~-~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 241 (259)
+ ..+ .+|+++|+|+.|..+.+......++-.+ .+++.+++++|+.+- +-..+.+.|.+|+.
T Consensus 144 --------~--------l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~-~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 144 --------F--------LAPCPSPGLVIQGDADDVVDLVAVLKWQESIK-ITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred --------h--------ccCCCCCceeEecChhhhhcHHHHHHhhcCCC-CceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 0 001 3799999999999887765555555444 578999999999887 55568888888885
No 95
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.75 E-value=2.3e-07 Score=78.85 Aligned_cols=221 Identities=16% Similarity=0.153 Sum_probs=111.6
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCccc-ccce
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI-CRGM 81 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~l 81 (259)
+.+++.|+.+|.++=..+.... . -..|-.+.+.+.+..+.+..+.++++++|++.||++...+++.+|.+ |+++
T Consensus 136 ~~~g~~vfvIsw~nPd~~~~~~--~---~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~ 210 (445)
T COG3243 136 LEQGLDVFVISWRNPDASLAAK--N---LEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSL 210 (445)
T ss_pred HHcCCceEEEeccCchHhhhhc--c---HHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccc
Confidence 4567889999998877765421 0 01233333334555555666778999999999999999999998888 9999
Q ss_pred EEeccchhhhhccCC-CCCCcchHHHHHHHHhhh-----hHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh-c
Q 025026 82 ILLNISLRMLHIKKQ-PWYGRPLIRSFQNLLRNT-----AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL-Q 154 (259)
Q Consensus 82 vli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 154 (259)
+++-+.....+...- -+.....++.+....... ......|..+.....+...+...+.......+-.+..+. .
T Consensus 211 T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~d 290 (445)
T COG3243 211 TLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNAD 290 (445)
T ss_pred eeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCC
Confidence 998764332211000 000011112221111000 011123333333333333222222222221111111111 1
Q ss_pred cccCcchHHH-HH-HHHHh----hCC-CCcccc--CC--CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCC
Q 025026 155 PGLETGAADV-FL-EFICY----SGG-PLPEEL--LP--QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 223 (259)
Q Consensus 155 ~~~~~~~~~~-~~-~~~~~----~~~-~~~~~~--~~--~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~ 223 (259)
....++.... ++ +++.. .+. ...... +. +||++.+.|++|.+.|.+.....++..++-.-.++-++||.
T Consensus 291 st~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHI 370 (445)
T COG3243 291 STRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHI 370 (445)
T ss_pred CccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceE
Confidence 1111222111 11 11110 000 000111 22 39999999999999998876666666666344566789998
Q ss_pred CCCCC
Q 025026 224 PQDEA 228 (259)
Q Consensus 224 ~~~e~ 228 (259)
-.+=+
T Consensus 371 a~vVN 375 (445)
T COG3243 371 AGVVN 375 (445)
T ss_pred EEEeC
Confidence 66544
No 96
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.73 E-value=7.5e-07 Score=83.53 Aligned_cols=77 Identities=14% Similarity=-0.009 Sum_probs=56.4
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--------------------CCCEEEEEeCc
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--------------------KDQAFFICNSI 62 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~--------------------~~~~~lvGhS~ 62 (259)
++++|.|+..|.||+|.|+.-. ..+.. .-.+|..++++=+. -.++-++|.|+
T Consensus 276 ~~rGYaVV~~D~RGtg~SeG~~-------~~~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 276 LPRGFAVVYVSGIGTRGSDGCP-------TTGDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HhCCeEEEEEcCCCCCCCCCcC-------ccCCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 4568999999999999997631 11222 22344444444332 35899999999
Q ss_pred chHHHHHHHhhCcccccceEEeccc
Q 025026 63 GGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 63 Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
||.+++.+|...|+.++.+|.+.+.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCC
Confidence 9999999999999999999987653
No 97
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.71 E-value=5.3e-08 Score=90.04 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=54.2
Q ss_pred cC-CCCeEEEeCCCCCCCCCCCCCCC-----CCCCCCC-----------CHHHHHHHHHHHHHHhc--------------
Q 025026 3 LA-KSHRVYSIDLIGYGYSDKPNPRD-----FFDKPFY-----------TFETWASQLNDFCKDVV-------------- 51 (259)
Q Consensus 3 L~-~~~~via~Dl~G~G~S~~~~~~~-----~~~~~~y-----------~~~~~a~dl~~~l~~l~-------------- 51 (259)
|+ .+|+|+++|+||||+|....... ......| .+.+.+.|+..+...++
T Consensus 472 La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~ 551 (792)
T TIGR03502 472 LAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINV 551 (792)
T ss_pred HHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 44 57999999999999995531000 0001112 78999999999988887
Q ss_pred --CCCEEEEEeCcchHHHHHHHhhC
Q 025026 52 --KDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 52 --~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
..+++++||||||+++..++...
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHhc
Confidence 24899999999999999999763
No 98
>PRK10162 acetyl esterase; Provisional
Probab=98.69 E-value=4.1e-07 Score=77.08 Aligned_cols=75 Identities=16% Similarity=0.112 Sum_probs=51.0
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhC------ccc
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME------PEI 77 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~------p~~ 77 (259)
++.|+++|.|.......|. ...+.....+.+.+..+.+++ ++++|+|+|+||.+++.++.+. +.+
T Consensus 112 g~~Vv~vdYrlape~~~p~-------~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~ 184 (318)
T PRK10162 112 GCTVIGIDYTLSPEARFPQ-------AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGK 184 (318)
T ss_pred CCEEEEecCCCCCCCCCCC-------cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccC
Confidence 6999999999755432221 111222333444455556665 4899999999999999998763 357
Q ss_pred ccceEEeccc
Q 025026 78 CRGMILLNIS 87 (259)
Q Consensus 78 v~~lvli~~~ 87 (259)
+.+++++.+.
T Consensus 185 ~~~~vl~~p~ 194 (318)
T PRK10162 185 VAGVLLWYGL 194 (318)
T ss_pred hhheEEECCc
Confidence 8899888753
No 99
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.66 E-value=1.3e-07 Score=75.31 Aligned_cols=81 Identities=12% Similarity=0.067 Sum_probs=53.2
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhCccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDK-----PFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~-----~~y~~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
.+|.|++||.+|+|.+...- ++... ......++.+-+..+.+..++ +++.|+|||+||.+++.++.++|+.
T Consensus 42 ~g~~Vv~Pd~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~ 119 (212)
T TIGR01840 42 YGFVLVAPEQTSYNSSNNCW--DWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDV 119 (212)
T ss_pred CCeEEEecCCcCccccCCCC--CCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchh
Confidence 46999999999998654210 00000 001122222222223333344 4899999999999999999999999
Q ss_pred ccceEEeccc
Q 025026 78 CRGMILLNIS 87 (259)
Q Consensus 78 v~~lvli~~~ 87 (259)
+.+++.+++.
T Consensus 120 ~~~~~~~~g~ 129 (212)
T TIGR01840 120 FAGGASNAGL 129 (212)
T ss_pred heEEEeecCC
Confidence 9999988864
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.61 E-value=1.4e-07 Score=73.80 Aligned_cols=76 Identities=17% Similarity=0.273 Sum_probs=53.9
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHhcC----CCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA-SQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a-~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
.+|.|+++|+||-|+|..+..+ ...+.+.||+ .|+.+.++.++. -+..+||||+||.+. .++.++| ++.
T Consensus 56 ~Gf~Vlt~dyRG~g~S~p~~~~----~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~-gL~~~~~-k~~ 129 (281)
T COG4757 56 AGFEVLTFDYRGIGQSRPASLS----GSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQAL-GLLGQHP-KYA 129 (281)
T ss_pred cCceEEEEecccccCCCccccc----cCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceee-cccccCc-ccc
Confidence 4699999999999999875432 2457888887 566666666643 478899999999753 4455566 555
Q ss_pred ceEEecc
Q 025026 80 GMILLNI 86 (259)
Q Consensus 80 ~lvli~~ 86 (259)
.....++
T Consensus 130 a~~vfG~ 136 (281)
T COG4757 130 AFAVFGS 136 (281)
T ss_pred eeeEecc
Confidence 5555543
No 101
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.60 E-value=2.5e-06 Score=72.10 Aligned_cols=190 Identities=18% Similarity=0.176 Sum_probs=94.7
Q ss_pred CCCeEEEeCCCCCC-CCCCCCCCC-----------CCC-CCCCCHHHHHHHHHHHHHHhc------CCCEEEEEeCcchH
Q 025026 5 KSHRVYSIDLIGYG-YSDKPNPRD-----------FFD-KPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGL 65 (259)
Q Consensus 5 ~~~~via~Dl~G~G-~S~~~~~~~-----------~~~-~~~y~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ 65 (259)
.+|-|+++|.||+| .|..+.... ..+ +..|-+..+..|....++.+. .+++.+.|.|.||.
T Consensus 108 ~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~ 187 (320)
T PF05448_consen 108 AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGG 187 (320)
T ss_dssp TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHH
T ss_pred CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchH
Confidence 56899999999999 332211000 001 233445555566666665553 24789999999999
Q ss_pred HHHHHHhhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhH--HHHHHHhhcChHHHHHHHHhhcCCCCC
Q 025026 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQ 143 (259)
Q Consensus 66 ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (259)
+++.+|+..| +|+.++...+.... +...+.......+. -..+++.... ...
T Consensus 188 lal~~aaLd~-rv~~~~~~vP~l~d------------~~~~~~~~~~~~~y~~~~~~~~~~d~--------------~~~ 240 (320)
T PF05448_consen 188 LALAAAALDP-RVKAAAADVPFLCD------------FRRALELRADEGPYPEIRRYFRWRDP--------------HHE 240 (320)
T ss_dssp HHHHHHHHSS-T-SEEEEESESSSS------------HHHHHHHT--STTTHHHHHHHHHHSC--------------THC
T ss_pred HHHHHHHhCc-cccEEEecCCCccc------------hhhhhhcCCccccHHHHHHHHhccCC--------------Ccc
Confidence 9999999986 69888876542211 11111100000000 0011110000 000
Q ss_pred CcHHHHHHHhccccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhhhhcCCCC-cccEEEcCCCCC
Q 025026 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGH 222 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~GH 222 (259)
..++..+.+ ... +...+ ....+|||++-+|-.|..+|+...-..-+.++ ..++.++|..||
T Consensus 241 ~~~~v~~~L-------~Y~----D~~nf-------A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~H 302 (320)
T PF05448_consen 241 REPEVFETL-------SYF----DAVNF-------ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGH 302 (320)
T ss_dssp HHHHHHHHH-------HTT-----HHHH-------GGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--S
T ss_pred cHHHHHHHH-------hhh----hHHHH-------HHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCC
Confidence 011111111 000 00000 11134999999999999999886544333332 358999999999
Q ss_pred CCCCCChhhH-HHHHHHHHHhc
Q 025026 223 CPQDEAPHLV-NPLVESFVTRH 243 (259)
Q Consensus 223 ~~~~e~p~~~-~~~i~~fl~~~ 243 (259)
|.++.+ .+...+||.++
T Consensus 303 ----e~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 303 ----EYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp ----STTHHHHHHHHHHHHHH-
T ss_pred ----CchhhHHHHHHHHHHhcC
Confidence 787777 77888898764
No 102
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.53 E-value=8.2e-07 Score=69.89 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=59.5
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCEEEEEeCcchHHHHHHHhh---Cccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVM---EPEI 77 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-~~~~~~lvGhS~Gg~ia~~~a~~---~p~~ 77 (259)
.|+..++|+++|++|+|.+.... .+++.+++.+...+... ...+++++|||+||.++..++.+ .++.
T Consensus 21 ~l~~~~~v~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 21 ALRGRRDVSALPLPGFGPGEPLP---------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred hcCCCccEEEecCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 35677899999999999775431 35777777666555443 45689999999999999999886 4567
Q ss_pred ccceEEeccc
Q 025026 78 CRGMILLNIS 87 (259)
Q Consensus 78 v~~lvli~~~ 87 (259)
+.++++++..
T Consensus 92 ~~~l~~~~~~ 101 (212)
T smart00824 92 PAAVVLLDTY 101 (212)
T ss_pred CcEEEEEccC
Confidence 9999988764
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.52 E-value=3.7e-06 Score=65.37 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEeccch
Q 025026 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 34 y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
...+...+.+.+++++...+.+.|||.||||..|..+|.+++ ++. |++|++.
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 356666778888888887777999999999999999999986 444 7888753
No 104
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.46 E-value=9.1e-07 Score=71.88 Aligned_cols=79 Identities=23% Similarity=0.316 Sum_probs=65.7
Q ss_pred ccCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCEEEEEeCcchHHHHHHHhh---Cccc
Q 025026 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVM---EPEI 77 (259)
Q Consensus 2 ~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~---~p~~ 77 (259)
.|.+...|+.++-||+|.-..+ .-+++++++...+.|.+..- .+++|+|||+||.||+.+|.+ ..+.
T Consensus 22 ~l~~~~~v~~l~a~g~~~~~~~---------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~ 92 (257)
T COG3319 22 ALGPLLPVYGLQAPGYGAGEQP---------FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEE 92 (257)
T ss_pred HhccCceeeccccCcccccccc---------cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCe
Confidence 3667789999999999964432 24799999999998988864 599999999999999999987 3457
Q ss_pred ccceEEeccchh
Q 025026 78 CRGMILLNISLR 89 (259)
Q Consensus 78 v~~lvli~~~~~ 89 (259)
|..|+++|+.+.
T Consensus 93 Va~L~llD~~~~ 104 (257)
T COG3319 93 VAFLGLLDAVPP 104 (257)
T ss_pred EEEEEEeccCCC
Confidence 999999998755
No 105
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.43 E-value=4.8e-07 Score=75.49 Aligned_cols=71 Identities=24% Similarity=0.367 Sum_probs=64.2
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
|.||||.+||||-|+.+.. ..+.....|.-+..++-+||.+++.+=|-+||+.|+..+|..+|++|.|+=+
T Consensus 189 FEVI~PSlPGygwSd~~sk------~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSK------TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred EEEeccCCCCcccCcCCcc------CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 8899999999999998753 3467888888899999999999999999999999999999999999998754
No 106
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.43 E-value=6.4e-06 Score=69.08 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=48.2
Q ss_pred CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCC-CCCCChhhHHHHHHHHHH
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVESFVT 241 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~-~~~e~p~~~~~~i~~fl~ 241 (259)
-.+.++.+++|.++|......+++..|++++.++++ ||. ..+-+.+.|.++|.+=++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 568899999999999887778999999999999987 999 446677889888887554
No 107
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.40 E-value=4.4e-06 Score=68.05 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCcc-----cccceEEeccchh
Q 025026 35 TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLR 89 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvli~~~~~ 89 (259)
++...+..|..++..| +++++.+|||||||++++.|+..+.. +|.++|.|+++..
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 5777777777777666 57899999999999999999888533 5899999987543
No 108
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.39 E-value=2.3e-06 Score=70.58 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHHh--------cCCCEEEEEeCcchHHHHHHHhhC-c----ccccceEEeccc
Q 025026 35 TFETWASQLNDFCKDV--------VKDQAFFICNSIGGLVGLQAAVME-P----EICRGMILLNIS 87 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l--------~~~~~~lvGhS~Gg~ia~~~a~~~-p----~~v~~lvli~~~ 87 (259)
+++.=++||.++++.+ +.++++|+|||-|+--.++|.... + ..|.+.|+-.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 4555566666666544 246899999999999999998875 2 579999987753
No 109
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.39 E-value=2.9e-06 Score=67.80 Aligned_cols=141 Identities=20% Similarity=0.192 Sum_probs=79.2
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHhc------CCCEEEEEeCcchHHHHHHHh
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFY------TFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y------~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
.+|.|++||+-+-.......... . ...+ ..+...+++.+.++.+. .+++.++|+||||.+++.+|.
T Consensus 40 ~Gy~v~~pD~f~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 40 EGYVVLAPDLFGGRGAPPSDPEE-A-FAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp TT-EEEEE-CCCCTS--CCCHHC-H-HHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred cCCCEEecccccCCCCCccchhh-H-HHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 57999999986555411111000 0 0000 02345567766666653 247999999999999999999
Q ss_pred hCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 025026 73 MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (259)
Q Consensus 73 ~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (259)
+. +++++.|..-+... . .. . ...
T Consensus 118 ~~-~~~~a~v~~yg~~~------------~----------~~------------~---------------------~~~- 140 (218)
T PF01738_consen 118 RD-PRVDAAVSFYGGSP------------P----------PP------------P---------------------LED- 140 (218)
T ss_dssp CT-TTSSEEEEES-SSS------------G----------GG------------H---------------------HHH-
T ss_pred hc-cccceEEEEcCCCC------------C----------Cc------------c---------------------hhh-
Confidence 88 57888776543000 0 00 0 000
Q ss_pred hccccCcchHHHHHHHHHhhCCCCccccCCCCCeEEEecCCCCCCCchhhh----hhcCCCCcccEEEcCCCCCCCCCCC
Q 025026 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQCPVLIAWGDKDPWEPIELGR----AYGNFDSVEDFIVLPNVGHCPQDEA 228 (259)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~~~~~~~~----~~~~~~~~~~~~~i~~~GH~~~~e~ 228 (259)
....++|+++++|++|+.++.+... .+.+.....+++++||++|-.+...
T Consensus 141 --------------------------~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 141 --------------------------APKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPS 194 (218)
T ss_dssp --------------------------GGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTT
T ss_pred --------------------------hcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCC
Confidence 0012489999999999999987432 2434445579999999999977655
Q ss_pred hh
Q 025026 229 PH 230 (259)
Q Consensus 229 p~ 230 (259)
.+
T Consensus 195 ~~ 196 (218)
T PF01738_consen 195 RP 196 (218)
T ss_dssp ST
T ss_pred Cc
Confidence 33
No 110
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.37 E-value=4.2e-06 Score=63.01 Aligned_cols=133 Identities=17% Similarity=0.277 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhh
Q 025026 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT 114 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (259)
.+++|++.|.+-+... -++++||+||+|+..+..++.+...+|+|+.++.+.-. ..+..
T Consensus 42 ~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~----------~~~~~---------- 100 (181)
T COG3545 42 VLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDV----------SRPEI---------- 100 (181)
T ss_pred CHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCc----------ccccc----------
Confidence 5677776666655555 34599999999999999999998779999999975311 00000
Q ss_pred hHHHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccccCcchHHHHHHHHHhhCCCCccccCCC-CCeEEEecCC
Q 025026 115 AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQ-CPVLIAWGDK 193 (259)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~PvliI~G~~ 193 (259)
.+.. ...+ ++.+. .+. -|.++|.-++
T Consensus 101 -----------~~~~-----~~tf-----------------------------------~~~p~--~~lpfps~vvaSrn 127 (181)
T COG3545 101 -----------RPKH-----LMTF-----------------------------------DPIPR--EPLPFPSVVVASRN 127 (181)
T ss_pred -----------chhh-----cccc-----------------------------------CCCcc--ccCCCceeEEEecC
Confidence 0000 0000 01111 122 7999999999
Q ss_pred CCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCC---hhhHHHHHHHHHHh
Q 025026 194 DPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA---PHLVNPLVESFVTR 242 (259)
Q Consensus 194 D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~---p~~~~~~i~~fl~~ 242 (259)
|++++.+.++.+++... +.++.+.++||+--.+- =.+....+.+|+.+
T Consensus 128 Dp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 128 DPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 99999999988887765 68999999999754332 12345555666544
No 111
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.33 E-value=2.8e-06 Score=68.21 Aligned_cols=75 Identities=16% Similarity=0.174 Sum_probs=50.5
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh-----cCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWAS----QLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~----dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
.++++++.|+......-. ..++.+.++ .+..+++.+ +.++++||||||||.||..++...+
T Consensus 38 ~~~d~ft~df~~~~s~~~----------g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~ 107 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFH----------GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN 107 (225)
T ss_pred cceeEEEeccCccccccc----------cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc
Confidence 358899999877643321 113333333 333444444 3568999999999999999887643
Q ss_pred ---ccccceEEeccchh
Q 025026 76 ---EICRGMILLNISLR 89 (259)
Q Consensus 76 ---~~v~~lvli~~~~~ 89 (259)
+.|+.+|.++++..
T Consensus 108 ~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 108 YDPDSVKTIITLGTPHR 124 (225)
T ss_pred cccccEEEEEEEcCCCC
Confidence 57999999987643
No 112
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.32 E-value=2.7e-05 Score=68.37 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=54.7
Q ss_pred CCCeEEEeCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCEEEEEeCcchHHHHHHHhh---
Q 025026 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (259)
Q Consensus 5 ~~~~via~Dl~-G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~--- 73 (259)
+...++.+|+| |-|.|...... ....+.++.++|+.++|..+ .-.+++|.|-|+||.-+-.+|..
T Consensus 84 ~~an~l~iD~PvGtGfS~~~~~~----~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFSYGNDPS----DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp GTSEEEEE--STTSTT-EESSGG----GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccceEEEeecCceEEeeccccc----cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 56899999955 99999754321 12357888999999888776 23379999999999966665543
Q ss_pred -C------cccccceEEeccch
Q 025026 74 -E------PEICRGMILLNISL 88 (259)
Q Consensus 74 -~------p~~v~~lvli~~~~ 88 (259)
. +-.++|+++.|+..
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-S
T ss_pred ccccccccccccccceecCccc
Confidence 3 33488999888643
No 113
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.19 E-value=8.9e-07 Score=70.56 Aligned_cols=50 Identities=20% Similarity=0.119 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhc---CCCEEEEEeCcchHHHHHHHhhCcccccceEEeccchh
Q 025026 39 WASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (259)
Q Consensus 39 ~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 89 (259)
+.++..+++.... .+++.|+|.|.||-+|+.+|..+| .|+.+|.++++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 3445556666653 258999999999999999999999 7999999987644
No 114
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.18 E-value=4.9e-06 Score=68.94 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=54.7
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhc--CCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-CKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~-l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
++-+|.|+-+.+|||+.|...+ ....-...+|-+.++ +..|+ .+.++|.|||+||.-+..+|..||| |+
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P-------~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-Vk 336 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLP-------YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VK 336 (517)
T ss_pred HHhCceeeccCCCCccccCCCC-------CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ce
Confidence 3457999999999999997532 111222334555565 45566 4689999999999999999999997 88
Q ss_pred ceEEe
Q 025026 80 GMILL 84 (259)
Q Consensus 80 ~lvli 84 (259)
++|+-
T Consensus 337 avvLD 341 (517)
T KOG1553|consen 337 AVVLD 341 (517)
T ss_pred EEEee
Confidence 88764
No 115
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.17 E-value=5.3e-06 Score=58.11 Aligned_cols=66 Identities=21% Similarity=0.317 Sum_probs=57.7
Q ss_pred CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCCCCcc
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPAS 249 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 249 (259)
.|+|+|.++.|+.+|.+.+..+++.+++++++.+++.||-.......-+.+++.+||.+...+..+
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~lP~~~ 100 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGTLPADG 100 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCCCCCCc
Confidence 899999999999999999999888888899999999999998755667899999999876655544
No 116
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.09 E-value=7.4e-05 Score=59.43 Aligned_cols=228 Identities=14% Similarity=0.149 Sum_probs=118.6
Q ss_pred CCCCeEEEeCCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCEEEEEeCcchHHHHHHHhh-Ccc-
Q 025026 4 AKSHRVYSIDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVM-EPE- 76 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~---~~~~~~~~~~~y~~~~~a~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~-~p~- 76 (259)
.++.++.++--.||-.-+. -... ......|+++++++.=.+|++..- ..|++++|||.|+++.+..... .++
T Consensus 57 ~~r~~~wtIsh~~H~~~P~sl~~~~s-~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~ 135 (301)
T KOG3975|consen 57 IDRLPVWTISHAGHALMPASLREDHS-HTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVF 135 (301)
T ss_pred ccccceeEEeccccccCCcccccccc-cccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhccccc
Confidence 3446677887777765431 1100 011246899999999889998874 4589999999999999998873 333
Q ss_pred cccceEEeccchhhhhccCCCCCCcchHHHHHHHHhhhhHHHHHHHh-hcChHHHHHHHHhhcCCCCCCcHHHHHH---H
Q 025026 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSESVRNILCQCYNDTSQVTEELVEK---I 152 (259)
Q Consensus 77 ~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 152 (259)
.|.+++++=++..--..+...+........+. ....-..|.. ...+.+++.++.+..........+.+.. +
T Consensus 136 ~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~-----hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l 210 (301)
T KOG3975|consen 136 SVQKAVLLFPTIERMHESPNGIRLTKVLRYLP-----HVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFL 210 (301)
T ss_pred ceEEEEEecchHHHHhcCCCceEeeeeeeeeh-----hhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHh
Confidence 47788777544321111111111000000000 0000000111 1123444444443322222333333321 1
Q ss_pred hccccCcchHHHHH-HHHHhhCCCCccccCC-C-CCeEEEecCCCCCCCchhhhhhcCCCCc--ccEEEcCCCCCCCCCC
Q 025026 153 LQPGLETGAADVFL-EFICYSGGPLPEELLP-Q-CPVLIAWGDKDPWEPIELGRAYGNFDSV--EDFIVLPNVGHCPQDE 227 (259)
Q Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~PvliI~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~GH~~~~e 227 (259)
..|.........-. ++..... ...+... + +-+-+..|..|.|+|......+++-.|. +++-. +++-|..-..
T Consensus 211 ~h~~v~rn~v~la~qEm~eV~~--~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~ 287 (301)
T KOG3975|consen 211 THPQVVRNSVGLAAQEMEEVTT--RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVK 287 (301)
T ss_pred hcHHHHHHHhhhchHHHHHHHH--hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeec
Confidence 11111000000000 0000000 0011122 2 7889999999999999888888776554 34434 8899998888
Q ss_pred ChhhHHHHHHHHH
Q 025026 228 APHLVNPLVESFV 240 (259)
Q Consensus 228 ~p~~~~~~i~~fl 240 (259)
..+..++++.+.+
T Consensus 288 ~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 288 HAQYMANAVFDMI 300 (301)
T ss_pred ccHHHHHHHHHhh
Confidence 8888888877654
No 117
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.00 E-value=0.00032 Score=56.79 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=52.5
Q ss_pred CCCeEEEeCCCC-CCCCCCCCCCCCC-CC---CCCCHHHHHHHHHHHHHHhc------CCCEEEEEeCcchHHHHHHHhh
Q 025026 5 KSHRVYSIDLIG-YGYSDKPNPRDFF-DK---PFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 5 ~~~~via~Dl~G-~G~S~~~~~~~~~-~~---~~y~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
.+|-|++||+-+ .|.+..-...... .. ..-+......|+.+.++.|. .+++-++|+||||.+++.++..
T Consensus 53 ~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 53 AGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred CCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 579999999988 3433221100000 00 01123566778888887774 3569999999999999999999
Q ss_pred CcccccceEEe
Q 025026 74 EPEICRGMILL 84 (259)
Q Consensus 74 ~p~~v~~lvli 84 (259)
.| .|++.+..
T Consensus 133 ~~-~v~a~v~f 142 (236)
T COG0412 133 AP-EVKAAVAF 142 (236)
T ss_pred cC-CccEEEEe
Confidence 98 56666653
No 118
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.00 E-value=2.8e-05 Score=61.64 Aligned_cols=69 Identities=22% Similarity=0.258 Sum_probs=45.6
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HHH-----hcCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF----CKD-----VVKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~----l~~-----l~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
.++.|+.+|.|=.-+. ++.+..+|+.+. +++ ...++++|+|+|-||.+++.++.+..
T Consensus 28 ~g~~v~~~~Yrl~p~~--------------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~ 93 (211)
T PF07859_consen 28 RGFVVVSIDYRLAPEA--------------PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRAR 93 (211)
T ss_dssp HTSEEEEEE---TTTS--------------STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred ccEEEEEeeccccccc--------------cccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhh
Confidence 4689999999954322 233334444433 333 22458999999999999999998754
Q ss_pred cc----ccceEEeccc
Q 025026 76 EI----CRGMILLNIS 87 (259)
Q Consensus 76 ~~----v~~lvli~~~ 87 (259)
+. +++++++++.
T Consensus 94 ~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 94 DRGLPKPKGIILISPW 109 (211)
T ss_dssp HTTTCHESEEEEESCH
T ss_pred hhcccchhhhhccccc
Confidence 43 8999998863
No 119
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.99 E-value=1.2e-05 Score=53.40 Aligned_cols=38 Identities=21% Similarity=0.412 Sum_probs=30.2
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK 48 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~ 48 (259)
++|.|+++|+||||+|+.... ..-+++++++|+..+++
T Consensus 42 ~G~~V~~~D~rGhG~S~g~rg------~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 42 QGYAVFAYDHRGHGRSEGKRG------HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCEEEEECCCcCCCCCCccc------ccCCHHHHHHHHHHHhC
Confidence 569999999999999985321 23479999999998763
No 120
>PRK10115 protease 2; Provisional
Probab=97.86 E-value=0.00094 Score=62.46 Aligned_cols=81 Identities=19% Similarity=0.151 Sum_probs=57.3
Q ss_pred cCCCCeEEEeCCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCEEEEEeCcchHHHHHHHhhCcc
Q 025026 3 LAKSHRVYSIDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPE 76 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~---~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~ 76 (259)
++++|-|+.++.||=|.=.+ ...+. .....+++|+.+.+..++++ +. +++.+.|.|.||+++..++.++|+
T Consensus 471 ~~rG~~v~~~n~RGs~g~G~~w~~~g~~--~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd 547 (686)
T PRK10115 471 LDRGFVYAIVHVRGGGELGQQWYEDGKF--LKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPE 547 (686)
T ss_pred HHCCcEEEEEEcCCCCccCHHHHHhhhh--hcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChh
Confidence 56789999999999654332 11000 01124677777666555544 43 479999999999999999999999
Q ss_pred cccceEEecc
Q 025026 77 ICRGMILLNI 86 (259)
Q Consensus 77 ~v~~lvli~~ 86 (259)
+.+.+|...+
T Consensus 548 lf~A~v~~vp 557 (686)
T PRK10115 548 LFHGVIAQVP 557 (686)
T ss_pred heeEEEecCC
Confidence 9999987654
No 121
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.84 E-value=0.00029 Score=56.88 Aligned_cols=79 Identities=20% Similarity=0.236 Sum_probs=53.9
Q ss_pred CCCeEEEeCCCCCCCCCC--CCCCCC-C----------C-CCCCCHHHHHHHHHHHHHHh------cCCCEEEEEeCcch
Q 025026 5 KSHRVYSIDLIGYGYSDK--PNPRDF-F----------D-KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGG 64 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~--~~~~~~-~----------~-~~~y~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg 64 (259)
.+|-|+++|-||.|.|.. +.+... + + ...|-+.....|+...++.+ .-+++.+.|.|-||
T Consensus 108 ~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGG 187 (321)
T COG3458 108 AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGG 187 (321)
T ss_pred cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCc
Confidence 469999999999998843 111111 0 1 23444444555555555544 23589999999999
Q ss_pred HHHHHHHhhCcccccceEEe
Q 025026 65 LVGLQAAVMEPEICRGMILL 84 (259)
Q Consensus 65 ~ia~~~a~~~p~~v~~lvli 84 (259)
.|++.+|+..| +|++++.+
T Consensus 188 glalaaaal~~-rik~~~~~ 206 (321)
T COG3458 188 GLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred hhhhhhhhcCh-hhhccccc
Confidence 99999999887 68887654
No 122
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.78 E-value=0.0022 Score=53.61 Aligned_cols=44 Identities=27% Similarity=0.368 Sum_probs=34.0
Q ss_pred CCCCeEEEecCCCCCCCchhhhh----hcCCC-CcccEEEcCCCCCCCC
Q 025026 182 PQCPVLIAWGDKDPWEPIELGRA----YGNFD-SVEDFIVLPNVGHCPQ 225 (259)
Q Consensus 182 ~~~PvliI~G~~D~~~~~~~~~~----~~~~~-~~~~~~~i~~~GH~~~ 225 (259)
++.|++|.+|..|.++|....+. +.+.- .+++++.+++.+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 45999999999999999876544 33334 4578888999999754
No 123
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.68 E-value=0.005 Score=49.23 Aligned_cols=73 Identities=15% Similarity=0.035 Sum_probs=41.7
Q ss_pred CCCCeEEEeCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 4 ~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
+++|+||-||---| |.|+.. ...|++....++|..+++-+ |..++-||..|+.|.||+..|.+- .+.
T Consensus 55 ~NGFhViRyDsl~HvGlSsG~-------I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~ls 125 (294)
T PF02273_consen 55 ANGFHVIRYDSLNHVGLSSGD-------INEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLS 125 (294)
T ss_dssp TTT--EEEE---B--------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----S
T ss_pred hCCeEEEeccccccccCCCCC-------hhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--Ccc
Confidence 46799999998877 677642 24689988888887766554 678899999999999999999964 366
Q ss_pred ceEEec
Q 025026 80 GMILLN 85 (259)
Q Consensus 80 ~lvli~ 85 (259)
-+|++-
T Consensus 126 fLitaV 131 (294)
T PF02273_consen 126 FLITAV 131 (294)
T ss_dssp EEEEES
T ss_pred eEEEEe
Confidence 666654
No 124
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.66 E-value=0.00047 Score=51.32 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEecc
Q 025026 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 86 (259)
-...|...+.++...+...+.++-|+||||.++-..|......|.++++++-
T Consensus 71 ~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgY 122 (213)
T COG3571 71 LNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGY 122 (213)
T ss_pred CCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecC
Confidence 3556777777888877777999999999999999988875555999998763
No 125
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.64 E-value=0.0002 Score=59.83 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=45.1
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-----C--CCEEEEEeCcchHHHHHHHhhC
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-----K--DQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~-----~--~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+-+|+++..||.|.|..+. +.++++.|-.++++.|. . +++++-|||+||.|+..+..++
T Consensus 171 ~aNvl~fNYpGVg~S~G~~----------s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 171 GANVLVFNYPGVGSSTGPP----------SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCcEEEECCCccccCCCCC----------CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 5789999999999996532 45677766666665552 2 5799999999999999865554
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.0003 Score=54.46 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=40.6
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChh----hHHHHHHHHH
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH----LVNPLVESFV 240 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~----~~~~~i~~fl 240 (259)
++|+|++.|++|...-.+..+.+......+++..+++.+|+--+|+-. -+...+++|+
T Consensus 207 ~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 207 TVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred eeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 389999999999765556555565555568999999999996655432 2444555443
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.59 E-value=0.00016 Score=59.86 Aligned_cols=76 Identities=16% Similarity=0.019 Sum_probs=51.7
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhcC--CCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~---~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
..+|-|+..|.||+|.|+-.- ......-++|.. +++.+... .++-++|.|++|..++.+|...|..+
T Consensus 55 ~~GY~vV~~D~RG~g~S~G~~--------~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~L 126 (272)
T PF02129_consen 55 ERGYAVVVQDVRGTGGSEGEF--------DPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHL 126 (272)
T ss_dssp HTT-EEEEEE-TTSTTS-S-B---------TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTE
T ss_pred hCCCEEEEECCcccccCCCcc--------ccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCc
Confidence 457999999999999997531 111223344444 44444433 37999999999999999999888899
Q ss_pred cceEEeccc
Q 025026 79 RGMILLNIS 87 (259)
Q Consensus 79 ~~lvli~~~ 87 (259)
+.++...+.
T Consensus 127 kAi~p~~~~ 135 (272)
T PF02129_consen 127 KAIVPQSGW 135 (272)
T ss_dssp EEEEEESE-
T ss_pred eEEEecccC
Confidence 999887654
No 128
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.51 E-value=0.00025 Score=53.32 Aligned_cols=52 Identities=12% Similarity=0.013 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCcc----cccceEEeccc
Q 025026 36 FETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE----ICRGMILLNIS 87 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvli~~~ 87 (259)
+......+...++.. ...+++++|||+||.+|..++.+.++ .+..++..+++
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 344455555555554 45789999999999999999998765 45666666643
No 129
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.44 E-value=0.0043 Score=54.77 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHHhc-----CCCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 34 YTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 34 y~~~~~a~dl~~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
-|+.+...-..+|++... ..|++|||.--||+.++.+|+.+|+.+..+|+-+++
T Consensus 116 QTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 116 QTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 478877766666766553 238999999999999999999999999988876543
No 130
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.41 E-value=0.0019 Score=52.09 Aligned_cols=58 Identities=14% Similarity=0.081 Sum_probs=49.0
Q ss_pred eEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCC-CCCCChhhHHHHHHHHHHhcC
Q 025026 186 VLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVESFVTRHA 244 (259)
Q Consensus 186 vliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~-~~~e~p~~~~~~i~~fl~~~~ 244 (259)
+.++.+++|.++|......+++..|++++..+. .||. ..+-+-++|.+.|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 566789999999987777899999999999998 7998 457788999999999887644
No 131
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.40 E-value=0.00066 Score=60.13 Aligned_cols=82 Identities=17% Similarity=0.117 Sum_probs=56.7
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--C-----CCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--K-----DQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~--~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
--||++..|-||+|.+-.......-...|.++..+|++.|++.+. . .+++++|-|+||++|..+-.+||+.|.
T Consensus 60 a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ 139 (434)
T PF05577_consen 60 ALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFD 139 (434)
T ss_dssp EEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-S
T ss_pred CcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeE
Confidence 458999999999997532111112234688999999999988775 1 279999999999999999999999999
Q ss_pred ceEEeccch
Q 025026 80 GMILLNISL 88 (259)
Q Consensus 80 ~lvli~~~~ 88 (259)
+.+.-+++.
T Consensus 140 ga~ASSapv 148 (434)
T PF05577_consen 140 GAWASSAPV 148 (434)
T ss_dssp EEEEET--C
T ss_pred EEEecccee
Confidence 998766543
No 132
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.30 E-value=0.00056 Score=54.50 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCCCCc-ccEEEcCCCCCCCCCCCh
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAP 229 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~GH~~~~e~p 229 (259)
++|+|-|+|++|.+++.+.+..+.+...+ .+++..+ .||.++...+
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 49999999999999998777776665433 5665554 6998876543
No 133
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.25 E-value=0.012 Score=49.76 Aligned_cols=73 Identities=16% Similarity=0.113 Sum_probs=48.0
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhCcc---
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPE--- 76 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~---dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~--- 76 (259)
.++.|+++|.|-.-+-..|. .+++..+ .+.+-..++++ +++.|+|+|-||.++..++..-.+
T Consensus 109 ~g~~vv~vdYrlaPe~~~p~----------~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~ 178 (312)
T COG0657 109 AGAVVVSVDYRLAPEHPFPA----------ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGL 178 (312)
T ss_pred cCCEEEecCCCCCCCCCCCc----------hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCC
Confidence 57999999998766553332 3444322 22222333454 579999999999999999887554
Q ss_pred -cccceEEeccc
Q 025026 77 -ICRGMILLNIS 87 (259)
Q Consensus 77 -~v~~lvli~~~ 87 (259)
.....+++.+.
T Consensus 179 ~~p~~~~li~P~ 190 (312)
T COG0657 179 PLPAAQVLISPL 190 (312)
T ss_pred CCceEEEEEecc
Confidence 35666676643
No 134
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.25 E-value=0.00057 Score=50.41 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
...+.|.+++++....++++.|||+||.+|..+++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 34455556555555568999999999999999988743
No 135
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.24 E-value=0.0008 Score=58.99 Aligned_cols=52 Identities=21% Similarity=0.214 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHh-c----CCCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 36 FETWASQLNDFCKDV-V----KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l-~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
.+.++++|..++++. . .++..|+|+||||..|+.+++++|+++..++.++++
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 344557777777764 2 246889999999999999999999999999998864
No 136
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.24 E-value=0.0068 Score=52.04 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=44.0
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCCCC-cccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
.+|.++|.|..|+++.++.+..+-..+| ...+..+|+++|..-. ..+.+.+..|+..
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 5999999999999998887776444344 3479999999998776 5556667777764
No 137
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.20 E-value=0.00075 Score=58.82 Aligned_cols=52 Identities=17% Similarity=0.362 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHh---cCCCEEEEEeCcchHHHHHHHhhCcc------cccceEEeccch
Q 025026 37 ETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE------ICRGMILLNISL 88 (259)
Q Consensus 37 ~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lvli~~~~ 88 (259)
+.+...|.++++.. ..++++||||||||.++..+....+. .|+++|.++++.
T Consensus 100 ~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 35556666666554 35699999999999999999888743 599999998753
No 138
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.19 E-value=0.00084 Score=57.24 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=45.8
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH---------------HHHHHHhc------CCCEEEEEeCcc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL---------------NDFCKDVV------KDQAFFICNSIG 63 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl---------------~~~l~~l~------~~~~~lvGhS~G 63 (259)
.+|-|+++|.+|+|........ .....++.+.++.-+ ...++-|. -+++-++|+|||
T Consensus 159 ~GYVvla~D~~g~GER~~~e~~--~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmG 236 (390)
T PF12715_consen 159 RGYVVLAPDALGFGERGDMEGA--AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMG 236 (390)
T ss_dssp TTSEEEEE--TTSGGG-SSCCC--TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGG
T ss_pred CCCEEEEEcccccccccccccc--ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeeccc
Confidence 4699999999999987654321 111234444443322 12334332 247889999999
Q ss_pred hHHHHHHHhhCcccccceEEec
Q 025026 64 GLVGLQAAVMEPEICRGMILLN 85 (259)
Q Consensus 64 g~ia~~~a~~~p~~v~~lvli~ 85 (259)
|..++.+|+.- ++|+..|..+
T Consensus 237 g~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 237 GYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHcc-hhhHhHhhhh
Confidence 99999999986 4788777654
No 139
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.17 E-value=0.0012 Score=56.25 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=49.2
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----c--CCCEEEEEeCcchHHHHHHHhhCcc--
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPE-- 76 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l----~--~~~~~lvGhS~Gg~ia~~~a~~~p~-- 76 (259)
++++||++|....-...-.. .-......++.|..+|..| + .+++||||||+||.||-.++.....
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~-------a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ 175 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ-------AVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGG 175 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH-------HHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT--
T ss_pred CCceEEEEcchhhccccccc-------hhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcc
Confidence 46899999985432210000 0012333444555555443 3 4689999999999999999998877
Q ss_pred cccceEEeccchhhh
Q 025026 77 ICRGMILLNISLRML 91 (259)
Q Consensus 77 ~v~~lvli~~~~~~~ 91 (259)
+|.+++-+|++.+.+
T Consensus 176 ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 176 KIGRITGLDPAGPLF 190 (331)
T ss_dssp -SSEEEEES-B-TTT
T ss_pred eeeEEEecCcccccc
Confidence 899999999876544
No 140
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.15 E-value=0.0012 Score=56.37 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCc--ccccceEEeccchhh
Q 025026 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMILLNISLRM 90 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvli~~~~~~ 90 (259)
.-+.+...|.+.+...+.+++.|+||||||.+...++..++ .+|++++.++++-.+
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 45555566777777778899999999999999999999888 899999999876443
No 141
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.14 E-value=0.032 Score=48.63 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=60.5
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCC-CC--CCCCHHHHH-HHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCcc
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFF-DK--PFYTFETWA-SQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE 76 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~-~~--~~y~~~~~a-~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~ 76 (259)
.+|.|=.-..||--.|.+....... .. ..|++++++ -||-+.++.. +.++.+.||||-|+.+.+.++...|+
T Consensus 105 aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~ 184 (403)
T KOG2624|consen 105 AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPE 184 (403)
T ss_pred cCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccch
Confidence 3588888888998888663211111 11 235666655 4666666654 45799999999999999999999877
Q ss_pred ---cccceEEeccchh
Q 025026 77 ---ICRGMILLNISLR 89 (259)
Q Consensus 77 ---~v~~lvli~~~~~ 89 (259)
+|+.++++.+...
T Consensus 185 ~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 185 YNKKIKSFIALAPAAF 200 (403)
T ss_pred hhhhhheeeeecchhh
Confidence 6999998887653
No 142
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.12 E-value=0.00062 Score=55.45 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHh-cCC--CEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 37 ETWASQLNDFCKDV-VKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 37 ~~~a~dl~~~l~~l-~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
+.+.++|..++++- ... +-.|+|+||||..|+.++++||+...+++.+++.
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 34556777777664 322 2689999999999999999999999999999864
No 143
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.05 E-value=0.0013 Score=52.41 Aligned_cols=50 Identities=14% Similarity=0.150 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhCcccccceEEeccch
Q 025026 39 WASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 39 ~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
+++.+..+..+..++ ++.+.|+|.||+.+..++..|||.+.++.++++.+
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 333344455566654 89999999999999999999999999998887653
No 144
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.04 E-value=0.0013 Score=53.47 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=32.0
Q ss_pred CCCEEEEEeCcchHHHHHHHhhC-----cccccceEEeccc
Q 025026 52 KDQAFFICNSIGGLVGLQAAVME-----PEICRGMILLNIS 87 (259)
Q Consensus 52 ~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvli~~~ 87 (259)
..++.|.|||-||-+|+.+++.+ +.+++.++++++.
T Consensus 90 ~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 90 FSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 35789999999999999999998 6689999999864
No 145
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.92 E-value=0.0023 Score=49.38 Aligned_cols=71 Identities=23% Similarity=0.207 Sum_probs=53.1
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCcc----
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE---- 76 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~---- 76 (259)
+++.|+.+|-+-|=-+.+ +.++.+.|+.+++++. +.+++.|||.|+|+-|.-....+-|.
T Consensus 28 ~G~~VvGvdsl~Yfw~~r------------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~ 95 (192)
T PF06057_consen 28 QGVPVVGVDSLRYFWSER------------TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRA 95 (192)
T ss_pred CCCeEEEechHHHHhhhC------------CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHh
Confidence 457788777665554433 5667788888887665 46789999999999888888777665
Q ss_pred cccceEEeccc
Q 025026 77 ICRGMILLNIS 87 (259)
Q Consensus 77 ~v~~lvli~~~ 87 (259)
+|.+++++...
T Consensus 96 ~v~~v~Ll~p~ 106 (192)
T PF06057_consen 96 RVAQVVLLSPS 106 (192)
T ss_pred heeEEEEeccC
Confidence 68888888754
No 146
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.88 E-value=0.0025 Score=51.13 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=29.5
Q ss_pred CCEEEEEeCcchHHHHHHHhhC----cccccceEEeccc
Q 025026 53 DQAFFICNSIGGLVGLQAAVME----PEICRGMILLNIS 87 (259)
Q Consensus 53 ~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvli~~~ 87 (259)
+++.+.|||.||.+|+.+|+.. .++|.++...|++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 3599999999999999999884 4578888888864
No 147
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.87 E-value=0.0017 Score=51.86 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHh
Q 025026 38 TWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~ 72 (259)
.++++|.+.++....+ ++++|||||||.|+-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 3444444444444443 7999999999999976544
No 148
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.80 E-value=0.046 Score=43.29 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=31.0
Q ss_pred cCCCEEEEEeCcchHHHHHHHhhCcccccceEEeccchhhh
Q 025026 51 VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRML 91 (259)
Q Consensus 51 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 91 (259)
+.++++|||||||=++|..+....| +++-|.+|+++.+.
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPI 93 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCc
Confidence 4578999999999999988765543 77888888876654
No 149
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.79 E-value=0.022 Score=48.44 Aligned_cols=60 Identities=12% Similarity=0.044 Sum_probs=42.2
Q ss_pred CCeEEEecCCCCCCCch--hhhhhcCCCCcccEEEcCCCCCCCCCCChh-----hHHHHHHHHHHhc
Q 025026 184 CPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQDEAPH-----LVNPLVESFVTRH 243 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~-----~~~~~i~~fl~~~ 243 (259)
.|+|++.++.|.+.... .++++++..-.+++...++++|..++-.|. ++.+.+.+|+++.
T Consensus 269 p~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 269 PPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 56999999999876432 345565543335677899999998876664 4566677777653
No 150
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.72 E-value=0.0032 Score=51.13 Aligned_cols=53 Identities=28% Similarity=0.308 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHH-hc--CCCEEEEEeCcchHHHHHHHhhCcccccceEEeccch
Q 025026 36 FETWASQLNDFCKD-VV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 36 ~~~~a~dl~~~l~~-l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
.+.+.++|.-++++ .. -++-.++|||+||.+++...+.+|+....+++++++.
T Consensus 117 ~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 117 REFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34444666666666 33 3467899999999999999999999999999998753
No 151
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.68 E-value=0.0064 Score=48.49 Aligned_cols=71 Identities=15% Similarity=0.017 Sum_probs=35.1
Q ss_pred CCCe---EEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcCCCEEEEEeCcchHHHHHHHhhCccc
Q 025026 5 KSHR---VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 5 ~~~~---via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
++|. |++++.-....+.... ......+.+.+|.+|+++ -|- |+.||||||||+++..+.... .-
T Consensus 28 ~GY~~~~vya~tyg~~~~~~~~~-------~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~~ 98 (219)
T PF01674_consen 28 AGYCDSEVYALTYGSGNGSPSVQ-------NAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-GG 98 (219)
T ss_dssp TT--CCCEEEE--S-CCHHTHHH-------HHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-TG
T ss_pred cCCCcceeEeccCCCCCCCCccc-------ccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-CC
Confidence 4566 7888874333322110 001122334455555544 456 999999999999998887654 33
Q ss_pred ccceEEe
Q 025026 78 CRGMILL 84 (259)
Q Consensus 78 v~~lvli 84 (259)
++..+-+
T Consensus 99 ~d~~~~l 105 (219)
T PF01674_consen 99 ADKVVNL 105 (219)
T ss_dssp GGTEEE-
T ss_pred CCcccCc
Confidence 3443333
No 152
>PLN02162 triacylglycerol lipase
Probab=96.61 E-value=0.0047 Score=54.10 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHh
Q 025026 36 FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
+....+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3444555666666655568999999999999999765
No 153
>PRK04940 hypothetical protein; Provisional
Probab=96.61 E-value=0.0078 Score=46.26 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhc----CCCEEEEEeCcchHHHHHHHhhCcccccceEEeccch
Q 025026 40 ASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 40 a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
.+.+.+.+..+. .+++.|||.|+||+-|..+|.++. + ..|++|++.
T Consensus 43 ~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 43 MQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred HHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 344555554321 157899999999999999999986 4 556788754
No 154
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.60 E-value=0.0029 Score=51.16 Aligned_cols=74 Identities=16% Similarity=0.049 Sum_probs=47.6
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhh----Cc---
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM----EP--- 75 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~----~p--- 75 (259)
..++.+.+|..|.-..-. . ...+...-+..+.++|+.+ +.++++|++||||+.+.+..... .+
T Consensus 49 ~~~i~FsWPS~g~~~~Y~----~--d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~ 122 (233)
T PF05990_consen 49 GVVILFSWPSDGSLLGYF----Y--DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPD 122 (233)
T ss_pred ceEEEEEcCCCCChhhhh----h--hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchh
Confidence 479999999998632100 0 1113333445566666555 46799999999999999987543 22
Q ss_pred --ccccceEEecc
Q 025026 76 --EICRGMILLNI 86 (259)
Q Consensus 76 --~~v~~lvli~~ 86 (259)
.++..+|++++
T Consensus 123 ~~~~~~~viL~Ap 135 (233)
T PF05990_consen 123 VKARFDNVILAAP 135 (233)
T ss_pred hHhhhheEEEECC
Confidence 25677777764
No 155
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.58 E-value=0.0035 Score=50.44 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=20.6
Q ss_pred CCCEEEEEeCcchHHHHHHHhhCc
Q 025026 52 KDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 52 ~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
..++++.|||+||.+|..++....
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHH
Confidence 457999999999999999888643
No 156
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.35 E-value=0.008 Score=48.26 Aligned_cols=53 Identities=11% Similarity=-0.080 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhhCcc-----cccceEEeccc
Q 025026 35 TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNIS 87 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvli~~~ 87 (259)
+..+++..+...+..| +++++.+|||||||.-...|...+.+ .++.+|.++++
T Consensus 114 s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 114 SGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred chhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 5556676776666555 58899999999999999998887543 48888888764
No 157
>PLN00413 triacylglycerol lipase
Probab=96.35 E-value=0.009 Score=52.48 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHh
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
+..+.|.+++++....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45566777777766678999999999999999885
No 158
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.33 E-value=0.055 Score=51.31 Aligned_cols=82 Identities=12% Similarity=0.003 Sum_probs=56.6
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDF-FDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~-~~~~~y~~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
.++-|+.+|-||-|...+.-.... ..-..+..+|+..-+..+++..-+ +++.+.|||.||.++...+...|+++.+.
T Consensus 557 ~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkc 636 (755)
T KOG2100|consen 557 RGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKC 636 (755)
T ss_pred CCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEE
Confidence 468899999999887654210000 011234666666666666665544 47999999999999999999999777777
Q ss_pred -EEecc
Q 025026 82 -ILLNI 86 (259)
Q Consensus 82 -vli~~ 86 (259)
+.+.+
T Consensus 637 gvavaP 642 (755)
T KOG2100|consen 637 GVAVAP 642 (755)
T ss_pred EEEecc
Confidence 55554
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.30 E-value=0.13 Score=41.64 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=45.2
Q ss_pred CCCeEEEecCCCCCCCchhhhhh----cCCCCcccEEEcCCCCCCCC-CCChhhHHHHHHHHH
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQ-DEAPHLVNPLVESFV 240 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~GH~~~-~e~p~~~~~~i~~fl 240 (259)
.+|-|+|+.+.|.+++.+.-+++ ++..-.++.+.+++++|.-| -++|++..+++.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 38999999999999998754332 22222368889999999977 567999999999885
No 160
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.23 E-value=0.017 Score=44.45 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHhcC-----CCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 36 FETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
-+.-+.+|..|++.|.- .+..++|||+|+.++-..+...+-.+..+|++.++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 55667788888877742 36899999999999988887777889999998865
No 161
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.23 E-value=0.0095 Score=53.84 Aligned_cols=78 Identities=18% Similarity=0.043 Sum_probs=54.1
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhc---CCCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~-~~~~y~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
+.+|-|+++|-||--.-...--.-.. .=..-.++|+++-+.-+.++.| .+++.+-|||+||.+++....++|+-.+
T Consensus 674 slGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifr 753 (867)
T KOG2281|consen 674 SLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFR 753 (867)
T ss_pred hcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceee
Confidence 35799999999996543221000000 0012357788888877788875 3689999999999999999999998554
Q ss_pred ce
Q 025026 80 GM 81 (259)
Q Consensus 80 ~l 81 (259)
-.
T Consensus 754 vA 755 (867)
T KOG2281|consen 754 VA 755 (867)
T ss_pred EE
Confidence 44
No 162
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.13 E-value=0.012 Score=47.65 Aligned_cols=77 Identities=14% Similarity=0.080 Sum_probs=46.5
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCEEEEEeCcchHHHHHHHhhCc-
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVMEP- 75 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p- 75 (259)
|-+|=|+||++-.- .. +...+ ..-+....++++-+-+.++ .+.++.|+|||.||-.|+.+|+.+.
T Consensus 71 SHGfIVVAPQl~~~--~~-p~~~~----Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~ 143 (307)
T PF07224_consen 71 SHGFIVVAPQLYTL--FP-PDGQD----EIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYAT 143 (307)
T ss_pred hcCeEEEechhhcc--cC-CCchH----HHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccc
Confidence 34688999999752 21 22110 1112223333333333333 1458999999999999999999874
Q ss_pred c-cccceEEeccc
Q 025026 76 E-ICRGMILLNIS 87 (259)
Q Consensus 76 ~-~v~~lvli~~~ 87 (259)
+ .+..||.+|+.
T Consensus 144 ~lkfsaLIGiDPV 156 (307)
T PF07224_consen 144 SLKFSALIGIDPV 156 (307)
T ss_pred cCchhheeccccc
Confidence 2 37777777753
No 163
>PLN02571 triacylglycerol lipase
Probab=96.12 E-value=0.0085 Score=51.99 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhh
Q 025026 38 TWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 73 (259)
++.++|..+++....+ ++++.|||+||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4445666666665543 68999999999999998875
No 164
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.07 E-value=0.0082 Score=55.42 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=25.1
Q ss_pred EEEEEeCcchHHHHHHHhh---CcccccceEEeccc
Q 025026 55 AFFICNSIGGLVGLQAAVM---EPEICRGMILLNIS 87 (259)
Q Consensus 55 ~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvli~~~ 87 (259)
++||||||||+||...+.. .++.|.-++..+++
T Consensus 184 VILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 184 VILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred EEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 8999999999999887654 25556666666654
No 165
>PLN02454 triacylglycerol lipase
Probab=96.07 E-value=0.01 Score=51.46 Aligned_cols=35 Identities=20% Similarity=0.107 Sum_probs=24.5
Q ss_pred HHHHHHHHH----HHhcCCC--EEEEEeCcchHHHHHHHhh
Q 025026 39 WASQLNDFC----KDVVKDQ--AFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 39 ~a~dl~~~l----~~l~~~~--~~lvGhS~Gg~ia~~~a~~ 73 (259)
..+++.+.+ +....++ +++.|||+||.+|+..|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 444444444 3333444 8999999999999999865
No 166
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.02 E-value=0.036 Score=49.90 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=34.1
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcC-CCCcccEEEcCCCCCCCCC
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQD 226 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~GH~~~~ 226 (259)
+.|||+|.|..|..+++...+.+++ .....++++|.+++|..-+
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 4899999999999988776555443 2334689999999998665
No 167
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.99 E-value=0.015 Score=49.99 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=54.0
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHhc----C--CCEEEEEeCcchHHHHHHHhhCccc
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFF---DKPFYTFETWASQLNDFCKDVV----K--DQAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~---~~~~y~~~~~a~dl~~~l~~l~----~--~~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
--+|....|=||+|.+-.....+ .-...+.++..+|.++++..+. - .+++.+|-|+|||+|..+=.+||+.
T Consensus 112 AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi 191 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI 191 (492)
T ss_pred ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhh
Confidence 45778899999999652211111 1112344444455555655553 2 3799999999999999999999999
Q ss_pred ccceEEecc
Q 025026 78 CRGMILLNI 86 (259)
Q Consensus 78 v~~lvli~~ 86 (259)
|.|....+.
T Consensus 192 v~GAlAaSA 200 (492)
T KOG2183|consen 192 VLGALAASA 200 (492)
T ss_pred hhhhhhccC
Confidence 988865443
No 168
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=95.84 E-value=0.0032 Score=54.68 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=25.7
Q ss_pred CCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 53 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
+++.++|||+||..+...+.+. .+++..|++|++
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES--
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCc
Confidence 4688999999999999887776 679999999975
No 169
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.82 E-value=0.064 Score=44.28 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhCcccccceEEeccch
Q 025026 35 TFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
....+++.+..++.+.+++ ++.+.|.|-||..+..+++.+|+...++.++.+..
T Consensus 124 dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 124 DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 4555666666667777776 79999999999999999999999999999987654
No 170
>PLN02408 phospholipase A1
Probab=95.75 E-value=0.016 Score=49.58 Aligned_cols=35 Identities=9% Similarity=0.076 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhC
Q 025026 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 40 a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
.++|..+++....+ ++++.|||+||.+|...|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 35555666665544 489999999999999988764
No 171
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.66 E-value=0.03 Score=47.74 Aligned_cols=47 Identities=15% Similarity=0.118 Sum_probs=33.7
Q ss_pred HHHHHHHHHh--cCCCEEEEEeCcchHHHHHHHhhCccc-----ccceEEeccc
Q 025026 41 SQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEI-----CRGMILLNIS 87 (259)
Q Consensus 41 ~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~-----v~~lvli~~~ 87 (259)
..|.+.+... |..+++|||||+|+.+.+.....-+++ |+.+++++++
T Consensus 206 ~~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 206 KVLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred HHHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 3444444332 445799999999999999887655544 8889988764
No 172
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.58 E-value=0.14 Score=40.62 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHHHHhcC----CCEEEEEeCcchHHHHHHH--hhCcccccceEEecc
Q 025026 33 FYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAA--VMEPEICRGMILLNI 86 (259)
Q Consensus 33 ~y~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a--~~~p~~v~~lvli~~ 86 (259)
.+++++=++||..++++++. ++++|+|||-|+-=.+.|. ...|..|+..|+..+
T Consensus 83 t~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 83 TFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred cccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 34677778999999998864 3799999999999666665 335667777776543
No 173
>COG0627 Predicted esterase [General function prediction only]
Probab=95.54 E-value=0.021 Score=48.15 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=39.9
Q ss_pred CCHHHHH-HHHHHHHHH-hcC----CCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 34 YTFETWA-SQLNDFCKD-VVK----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 34 y~~~~~a-~dl~~~l~~-l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
|.+.++. ++|-+.+++ +.. ++-.++||||||.=|+.+|++||++...+.-+++.
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 6666554 455534443 331 25779999999999999999999999999877654
No 174
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.49 E-value=0.031 Score=50.43 Aligned_cols=79 Identities=18% Similarity=0.110 Sum_probs=59.8
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhCccccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT--FETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~--~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
+.+|-|+..|.||.|.|+-.-. ..++ .+| .-|+++++.+... .++-.+|.|++|...+.+|+..|-.++
T Consensus 78 a~GYavV~qDvRG~~~SeG~~~------~~~~~E~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLk 150 (563)
T COG2936 78 AQGYAVVNQDVRGRGGSEGVFD------PESSREAED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALK 150 (563)
T ss_pred cCceEEEEecccccccCCcccc------eeccccccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchhe
Confidence 4679999999999999986321 1112 223 2467788887654 589999999999999999999888889
Q ss_pred ceEEeccchh
Q 025026 80 GMILLNISLR 89 (259)
Q Consensus 80 ~lvli~~~~~ 89 (259)
.++-..+...
T Consensus 151 ai~p~~~~~D 160 (563)
T COG2936 151 AIAPTEGLVD 160 (563)
T ss_pred eecccccccc
Confidence 8887766543
No 175
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.41 E-value=0.029 Score=49.08 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHH----hcCCCEEEEEeCcchHHHHHHHhhCcc--------cccceEEecc
Q 025026 38 TWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVMEPE--------ICRGMILLNI 86 (259)
Q Consensus 38 ~~a~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvli~~ 86 (259)
++-..+...++. -|.+|++||+|||||.+...+...+++ .|++++-++.
T Consensus 163 ~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 163 QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 334444444433 345899999999999999999998877 4666666654
No 176
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.41 E-value=0.028 Score=50.88 Aligned_cols=50 Identities=12% Similarity=0.019 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHH---hc-CCCEEEEEeCcchHHHHHHHhhC---------------cccccceEEeccc
Q 025026 38 TWASQLNDFCKD---VV-KDQAFFICNSIGGLVGLQAAVME---------------PEICRGMILLNIS 87 (259)
Q Consensus 38 ~~a~dl~~~l~~---l~-~~~~~lvGhS~Gg~ia~~~a~~~---------------p~~v~~lvli~~~ 87 (259)
.+-..|..+++. +. .+|++||||||||.+++.+...- -+.|+++|.++++
T Consensus 194 ~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 194 QTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 343444444443 33 57999999999999999986632 1358889888764
No 177
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=95.40 E-value=0.033 Score=43.91 Aligned_cols=57 Identities=18% Similarity=0.242 Sum_probs=43.3
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
++|+|-|.|+.|.++|...+..+.+..+++. ++.-.+||+++-.. .+.+-+.+|+..
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~-vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKDAT-VLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCCCe-EEecCCCccCCCch--HHHHHHHHHHHH
Confidence 4999999999999999988888877777664 45556799988766 445555556643
No 178
>PLN02934 triacylglycerol lipase
Probab=95.39 E-value=0.026 Score=50.11 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHh
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
.....|.+++++....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 35566667777666678999999999999999875
No 179
>PLN02324 triacylglycerol lipase
Probab=95.33 E-value=0.027 Score=48.87 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhh
Q 025026 41 SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 41 ~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 73 (259)
++|..+++....+ ++++.|||+||.+|+..|..
T Consensus 201 ~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 201 GELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4455566655543 58999999999999998865
No 180
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.16 E-value=0.043 Score=45.31 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=37.0
Q ss_pred HHHHHhcCC--CEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 45 DFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 45 ~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
.+.++.+++ ++.++|.|+||+-++.++.++||...+.++|++.
T Consensus 259 vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 259 VLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred HHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 344566664 7999999999999999999999999999999863
No 181
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.10 E-value=0.047 Score=44.96 Aligned_cols=60 Identities=22% Similarity=0.386 Sum_probs=44.0
Q ss_pred CCeEEEecCCCCCCCchhhhhhcC-CCC-cccEEEcCCCCCCCCCCChh---hHHHHHHHHHHhc
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGN-FDS-VEDFIVLPNVGHCPQDEAPH---LVNPLVESFVTRH 243 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~-~~~-~~~~~~i~~~GH~~~~e~p~---~~~~~i~~fl~~~ 243 (259)
+|+|+++|..|..+|...+..+.. ... ..+..++++++|......+. +..+.+.+|+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 899999999999999887765332 222 35778899999998865544 5566666777654
No 182
>COG3150 Predicted esterase [General function prediction only]
Probab=95.09 E-value=0.058 Score=40.68 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=50.8
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEeccchh
Q 025026 12 IDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (259)
Q Consensus 12 ~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 89 (259)
.|-|-.+.|.+.. ...+...++.|..++..++.+..-|||-|+||+.|..++.++. ++.+ ++|+..+
T Consensus 26 ~~~~~i~y~~p~l--------~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--irav-~~NPav~ 92 (191)
T COG3150 26 EDVRDIEYSTPHL--------PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRAV-VFNPAVR 92 (191)
T ss_pred ccccceeeecCCC--------CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chhh-hcCCCcC
Confidence 4555556654322 2368888999999999999888999999999999999999985 5565 4665433
No 183
>PLN02802 triacylglycerol lipase
Probab=95.05 E-value=0.035 Score=49.30 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhC
Q 025026 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 40 a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
.++|..+++....+ ++++.|||+||.+|...|...
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455556655443 689999999999999987753
No 184
>PLN02310 triacylglycerol lipase
Probab=95.03 E-value=0.037 Score=48.05 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhc--C--CCEEEEEeCcchHHHHHHHhh
Q 025026 39 WASQLNDFCKDVV--K--DQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 39 ~a~dl~~~l~~l~--~--~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
..+.|..+++.+. . -++++.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3345556665553 1 268999999999999998864
No 185
>PLN02753 triacylglycerol lipase
Probab=94.88 E-value=0.04 Score=49.14 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=24.0
Q ss_pred HHHHHHHHHhcC-----CCEEEEEeCcchHHHHHHHhh
Q 025026 41 SQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 41 ~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
+.|..+++.... -++++.|||+||.+|...|..
T Consensus 295 ~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 295 TEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 334455554432 379999999999999998864
No 186
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.83 E-value=0.051 Score=46.13 Aligned_cols=58 Identities=19% Similarity=0.284 Sum_probs=43.0
Q ss_pred CCeEEEecCCCCCCCchhhhhh-------------------------cCCCCcccEEEcCCCCCCCCCCChhhHHHHHHH
Q 025026 184 CPVLIAWGDKDPWEPIELGRAY-------------------------GNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 238 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~-------------------------~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~ 238 (259)
++|||..|+.|.+++.-..+.+ +++.++-++..|.++||+++ ++|+...+++..
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~ 312 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQR 312 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHH
Confidence 8999999999987764322110 01112257888889999997 599999999999
Q ss_pred HHHh
Q 025026 239 FVTR 242 (259)
Q Consensus 239 fl~~ 242 (259)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9965
No 187
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.79 E-value=0.15 Score=43.34 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=48.2
Q ss_pred CeEEEeCCC-CCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHh-------cCCCEEEEEeCcchHHHHHHHhh----
Q 025026 7 HRVYSIDLI-GYGYSDKPNPRDFFDKPFYT-FETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM---- 73 (259)
Q Consensus 7 ~~via~Dl~-G~G~S~~~~~~~~~~~~~y~-~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~---- 73 (259)
.+|+.+|.| |-|-|-...+ ..++ =+..++|+..+|..+ ...+++|.|-|+||.-+-.+|..
T Consensus 2 aNvLfiDqPvGvGfSy~~~~------~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~ 75 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTP------IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQG 75 (319)
T ss_pred ccEEEecCCCCCCCCCCCCC------CCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhh
Confidence 468999999 8888854321 1122 123446666666553 23479999999999966666553
Q ss_pred C------cccccceEEeccc
Q 025026 74 E------PEICRGMILLNIS 87 (259)
Q Consensus 74 ~------p~~v~~lvli~~~ 87 (259)
. +=.++|+++-|+.
T Consensus 76 n~~~~~~~inLkGi~IGNg~ 95 (319)
T PLN02213 76 NYICCEPPINLQGYMLGNPV 95 (319)
T ss_pred cccccCCceeeeEEEeCCCC
Confidence 1 1247788877753
No 188
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.72 E-value=0.065 Score=41.44 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=35.9
Q ss_pred HHHHHHHHHHh----cCCCEEEEEeCcchHHHHHHHhh------CcccccceEEeccchh
Q 025026 40 ASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM------EPEICRGMILLNISLR 89 (259)
Q Consensus 40 a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvli~~~~~ 89 (259)
++++...++.. ...+++|+|+|.||+|+..++.. ..++|.++++++-+.+
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 34444444443 34589999999999999999877 4567999999875433
No 189
>PLN02719 triacylglycerol lipase
Probab=94.56 E-value=0.054 Score=48.19 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=18.1
Q ss_pred CEEEEEeCcchHHHHHHHhh
Q 025026 54 QAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a~~ 73 (259)
++++.|||+||.+|...|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999998864
No 190
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.43 E-value=0.066 Score=48.23 Aligned_cols=77 Identities=16% Similarity=0.032 Sum_probs=51.0
Q ss_pred CeEEEeCCC----CCCCCCCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhh--Cc
Q 025026 7 HRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWA---SQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--EP 75 (259)
Q Consensus 7 ~~via~Dl~----G~G~S~~~~~~~~~~~~~y~~~~~a---~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p 75 (259)
+-|++++.| ||+.+.... ....+.+.|+. +.|.+-++.+|. ++++|+|+|.||..+..++.. .+
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~-----~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~ 200 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIE-----LPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSK 200 (493)
T ss_pred EEEEEecccccccccccCCCCC-----CCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchh
Confidence 678888888 555443221 11234444443 444455666665 489999999999998888776 35
Q ss_pred ccccceEEeccch
Q 025026 76 EICRGMILLNISL 88 (259)
Q Consensus 76 ~~v~~lvli~~~~ 88 (259)
..++++|++++..
T Consensus 201 ~lf~~~i~~sg~~ 213 (493)
T cd00312 201 GLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHhhhcCCc
Confidence 5789999887643
No 191
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.40 E-value=0.062 Score=45.56 Aligned_cols=63 Identities=13% Similarity=0.092 Sum_probs=35.5
Q ss_pred CeEEEeCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHh
Q 025026 7 HRVYSIDLIGYGYSDKP-NPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~-~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
.-++.+-+|--|.--.- ..+ .+..|+-+.+..-|..+.+....++++|++||||.++.++..-
T Consensus 147 ~~pVvFSWPS~g~l~~Yn~Dr---eS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 147 GVPVVFSWPSRGSLLGYNYDR---ESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALR 210 (377)
T ss_pred cceEEEEcCCCCeeeecccch---hhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHH
Confidence 44566666655542110 000 1123444444444444444445678999999999999988644
No 192
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.23 E-value=0.07 Score=47.57 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcC----CCEEEEEeCcchHHHHHHHhh
Q 025026 40 ASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 40 a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
.++|..+++.+.. -++++.|||+||.+|+..|..
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3556666655531 269999999999999988864
No 193
>PLN02209 serine carboxypeptidase
Probab=94.14 E-value=0.1 Score=46.20 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=44.0
Q ss_pred CCCeEEEecCCCCCCCchhhhhh------------------------cCCCC-cccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAY------------------------GNFDS-VEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~------------------------~~~~~-~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
.++|||..|+.|.+++.-..+.. .+... +-+++.+.+|||+++ .+|++..+++.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 38999999999998874322211 01112 257788999999996 69999999999
Q ss_pred HHHHh
Q 025026 238 SFVTR 242 (259)
Q Consensus 238 ~fl~~ 242 (259)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 194
>PLN02761 lipase class 3 family protein
Probab=94.07 E-value=0.079 Score=47.26 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=17.9
Q ss_pred CEEEEEeCcchHHHHHHHhh
Q 025026 54 QAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a~~ 73 (259)
++++.|||+||.+|...|..
T Consensus 295 sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYD 314 (527)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 69999999999999988753
No 195
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.05 E-value=0.16 Score=44.85 Aligned_cols=82 Identities=16% Similarity=0.149 Sum_probs=62.2
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----C--CEEEEEeCcchHHHHHHHhhCccccc
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----D--QAFFICNSIGGLVGLQAAVMEPEICR 79 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~-----~--~~~lvGhS~Gg~ia~~~a~~~p~~v~ 79 (259)
-.|+-+..|=||+|.+........-...+......||+++|+++.. + +.+.+|-|+-|.++..+=..|||.|.
T Consensus 119 A~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~ 198 (514)
T KOG2182|consen 119 ATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTV 198 (514)
T ss_pred CeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhhe
Confidence 5688899999999954322221111234677778899999988852 2 78899999999999999999999999
Q ss_pred ceEEeccch
Q 025026 80 GMILLNISL 88 (259)
Q Consensus 80 ~lvli~~~~ 88 (259)
+-|-.+++.
T Consensus 199 GsvASSapv 207 (514)
T KOG2182|consen 199 GSVASSAPV 207 (514)
T ss_pred eecccccce
Confidence 988766543
No 196
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.90 E-value=0.12 Score=45.66 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=43.9
Q ss_pred CCCeEEEecCCCCCCCchhhhhh-------------------------cCCCCcccEEEcCCCCCCCCCCChhhHHHHHH
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAY-------------------------GNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 237 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~-------------------------~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 237 (259)
.++|||..|+.|.+++.-..+.+ +.+..+-+++.|-+|||+++ .+|++..+++.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 38999999999998874332211 01111256888999999997 69999999999
Q ss_pred HHHHh
Q 025026 238 SFVTR 242 (259)
Q Consensus 238 ~fl~~ 242 (259)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 197
>KOG3101 consensus Esterase D [General function prediction only]
Probab=93.88 E-value=0.01 Score=46.42 Aligned_cols=53 Identities=13% Similarity=0.217 Sum_probs=37.9
Q ss_pred CCCHHHHH-HHHHHHHHH----hcCCCEEEEEeCcchHHHHHHHhhCcccccceEEec
Q 025026 33 FYTFETWA-SQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (259)
Q Consensus 33 ~y~~~~~a-~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~ 85 (259)
+|.|=+++ .+|.+++.. +...++.+.||||||.=|+..+++.|.+.+++-...
T Consensus 116 ~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFA 173 (283)
T KOG3101|consen 116 HYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFA 173 (283)
T ss_pred hhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccc
Confidence 35555554 445555542 123478899999999999999999999988876554
No 198
>PLN02847 triacylglycerol lipase
Probab=93.83 E-value=0.1 Score=47.26 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=19.0
Q ss_pred CCCEEEEEeCcchHHHHHHHhh
Q 025026 52 KDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 52 ~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
.-+++++|||+||.+|..++..
T Consensus 250 dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHH
Confidence 3479999999999999998775
No 199
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=93.38 E-value=0.18 Score=43.06 Aligned_cols=49 Identities=20% Similarity=0.106 Sum_probs=38.4
Q ss_pred CCeEEEecCCCCCCCchhh-hhhcCCCCcc--cEEEcCCCCCCCCCCChhhH
Q 025026 184 CPVLIAWGDKDPWEPIELG-RAYGNFDSVE--DFIVLPNVGHCPQDEAPHLV 232 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~-~~~~~~~~~~--~~~~i~~~GH~~~~e~p~~~ 232 (259)
+|++++.|..|.+.|.... .....++++. .+..+|++.|+-..|-++++
T Consensus 252 ~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 252 DPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 9999999999997776543 2333345655 58899999999999998886
No 200
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.21 E-value=0.29 Score=41.39 Aligned_cols=41 Identities=15% Similarity=0.235 Sum_probs=33.2
Q ss_pred HHHHhcCCCEEEEEeCcchHHHHHHHhhCcc-cccceEEecc
Q 025026 46 FCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNI 86 (259)
Q Consensus 46 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvli~~ 86 (259)
++...+..+++||||+.|+..+..+....+. .+.++|+|+.
T Consensus 186 ~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 186 FAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred HHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 3344455569999999999999999888754 5999999986
No 201
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.19 E-value=0.071 Score=44.13 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=29.6
Q ss_pred CEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
.-.|.|-|+||.+++..++.||+++..++.-+++
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 3569999999999999999999999888776653
No 202
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.76 E-value=0.17 Score=43.30 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhh
Q 025026 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 37 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
..+-+++..++....--++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 3455677777777775689999999999999888775
No 203
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.75 E-value=0.4 Score=42.55 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=48.7
Q ss_pred CCCeEEEeC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCEEEEEeCcchHHHHHHHhh---
Q 025026 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (259)
Q Consensus 5 ~~~~via~D-l~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~--- 73 (259)
+...++.+| ..|.|.|....+.. ..-+. +.++++.+++..+ ...+++|+|.|+||..+-.+|..
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~~----~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPID----KTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCCC----ccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 457899999 77999986432111 01112 2235566655543 23579999999999866665543
Q ss_pred -C------cccccceEEeccc
Q 025026 74 -E------PEICRGMILLNIS 87 (259)
Q Consensus 74 -~------p~~v~~lvli~~~ 87 (259)
. +-.++|+++.|+.
T Consensus 189 ~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 189 GNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred hcccccCCcccceeeEecCCC
Confidence 1 2257788887753
No 204
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.72 E-value=0.21 Score=44.24 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=46.3
Q ss_pred CCeEEEecCCCCCCCchhhhhh----c-----C---C-C------------CcccEEEcCCCCCCCCCCChhhHHHHHHH
Q 025026 184 CPVLIAWGDKDPWEPIELGRAY----G-----N---F-D------------SVEDFIVLPNVGHCPQDEAPHLVNPLVES 238 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~----~-----~---~-~------------~~~~~~~i~~~GH~~~~e~p~~~~~~i~~ 238 (259)
.|++|..|+.|..+|....+.. . + . . .+..+..+.|+||+++.++|+....++..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999886543321 0 0 0 1 11245788899999999999999999999
Q ss_pred HHHhcC
Q 025026 239 FVTRHA 244 (259)
Q Consensus 239 fl~~~~ 244 (259)
|+....
T Consensus 444 fl~g~~ 449 (454)
T KOG1282|consen 444 FLNGQP 449 (454)
T ss_pred HHcCCC
Confidence 997644
No 205
>PLN02209 serine carboxypeptidase
Probab=92.20 E-value=0.5 Score=41.95 Aligned_cols=78 Identities=17% Similarity=0.258 Sum_probs=49.6
Q ss_pred CCCeEEEeC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCEEEEEeCcchHHHHHHHhh---
Q 025026 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (259)
Q Consensus 5 ~~~~via~D-l~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~--- 73 (259)
+..+++.+| ..|.|.|....+. ..-+-++.++|+.+++..+ ...+++|.|.|+||.-+-.+|..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~-----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPI-----ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCC-----CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 457899999 7799988543211 1112234456777776654 12479999999999865555543
Q ss_pred -C------cccccceEEeccc
Q 025026 74 -E------PEICRGMILLNIS 87 (259)
Q Consensus 74 -~------p~~v~~lvli~~~ 87 (259)
. +-.++|+++.++.
T Consensus 191 ~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred hcccccCCceeeeeEEecCcc
Confidence 1 1246788887753
No 206
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.14 E-value=0.5 Score=39.56 Aligned_cols=56 Identities=14% Similarity=-0.046 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHHHhc-C-CCEEEEEeCcchHHHHHHHhhCcc--cccceEEeccchhh
Q 025026 35 TFETWASQLNDFCKDVV-K-DQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~-~-~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~~~~ 90 (259)
.+.++++.+++-+.... . +=+++||+|-||.++-.++-+.|+ .|+.+|.++++..+
T Consensus 74 ~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 74 PLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred CHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 56666666666555432 1 249999999999999999999998 49999999876544
No 207
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=92.14 E-value=0.36 Score=38.07 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhcC-CCEEEEEeCcchHHHHHHHhhC
Q 025026 36 FETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+.|..+-...+|++.+. .+++|+|||-|+++..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44444545556777754 4899999999999999998764
No 208
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=91.53 E-value=0.091 Score=43.73 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=33.1
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEeccchh
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 89 (259)
+..+...+.-+++.++|||+||..+......+-+ .+..|..|++-.
T Consensus 231 ~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 231 LEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAWMF 276 (399)
T ss_pred HHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeeeeec
Confidence 3344445555679999999999998888777654 666777776543
No 209
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=91.17 E-value=3.3 Score=35.60 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=42.9
Q ss_pred CCeEEEecCCCCCCCchhhhhhcCCCCc-ccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 243 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 243 (259)
+|..||.|..|.+++++.+..+-...|+ ..+..+|+..|.. .++.+.+.|..|+...
T Consensus 330 lpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~---~n~~i~esl~~flnrf 387 (507)
T COG4287 330 LPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL---INQFIKESLEPFLNRF 387 (507)
T ss_pred ccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh---hHHHHHHHHHHHHHHH
Confidence 8999999999999888888776555665 3588999988854 4555666677777543
No 210
>PLN02606 palmitoyl-protein thioesterase
Probab=91.14 E-value=0.71 Score=38.59 Aligned_cols=56 Identities=14% Similarity=-0.003 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHHHHHhc-C-CCEEEEEeCcchHHHHHHHhhCcc--cccceEEeccchhh
Q 025026 35 TFETWASQLNDFCKDVV-K-DQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~-~-~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~~~~ 90 (259)
.+.++++.+++-+.... + +=+++||+|-||.+.-.++-+.|+ .|+.+|.++++..+
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred CHHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 46666666665555422 1 249999999999999999999988 49999999876544
No 211
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=90.22 E-value=0.5 Score=41.03 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=29.8
Q ss_pred CEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
+++++|+|.||.+|...|.-.|..+.+++=-+++
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999999988654443
No 212
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=89.90 E-value=0.57 Score=37.23 Aligned_cols=43 Identities=19% Similarity=0.258 Sum_probs=32.2
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCC---CC--cccEEEcCCCCCCCC
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNF---DS--VEDFIVLPNVGHCPQ 225 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~---~~--~~~~~~i~~~GH~~~ 225 (259)
++|+|++.|+.|..+|...-..+.+. .| ..+++++++.||-.+
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 39999999999999987754433221 22 147999999999866
No 213
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.82 E-value=0.86 Score=41.37 Aligned_cols=57 Identities=21% Similarity=0.369 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHHHhcC---CCEEEEEeCcchHHHHHHHh-----hCcc------cccceEEeccchhhh
Q 025026 35 TFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAV-----MEPE------ICRGMILLNISLRML 91 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~-----~~p~------~v~~lvli~~~~~~~ 91 (259)
++..-+..+.+.+.+-++ .++..|||||||..+=.+.+ ..|+ .-+|++++..+.++.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 344445555555555543 36999999999988766543 2344 256777777765543
No 214
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=89.44 E-value=0.97 Score=44.54 Aligned_cols=55 Identities=20% Similarity=0.106 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHHhcC-CCEEEEEeCcchHHHHHHHhhCcc--cccceEEeccchh
Q 025026 35 TFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLR 89 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~~~ 89 (259)
++++.|..-..-++++.- .+..|+|.|+|+.+++.+|..-.+ -...+|++|+++.
T Consensus 2163 Sies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2163 SIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred hHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 688888777777777764 589999999999999999886433 3666999988653
No 215
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.22 E-value=0.55 Score=37.06 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=32.6
Q ss_pred HHHhcCCCEEEEEeCcchHHHHHHHhhCcc--cccceEEeccc
Q 025026 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNIS 87 (259)
Q Consensus 47 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~ 87 (259)
+.-...+.+.+|.||.||...+.+..++|+ +|..+++.+++
T Consensus 184 v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 184 VLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred hcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 333455789999999999999999999886 57777776664
No 216
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=88.58 E-value=2 Score=35.63 Aligned_cols=55 Identities=15% Similarity=-0.070 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhc-C-CCEEEEEeCcchHHHHHHHhhCcc-cccceEEeccchhh
Q 025026 36 FETWASQLNDFCKDVV-K-DQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLRM 90 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~-~-~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvli~~~~~~ 90 (259)
+.+.++.+++.+..-. + +=+++||+|=||.+.-.++-++|+ .|+-+|.++++..+
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccc
Confidence 4555566666555432 2 349999999999999999999876 59999999876543
No 217
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.52 E-value=1.1 Score=36.97 Aligned_cols=26 Identities=12% Similarity=0.185 Sum_probs=22.0
Q ss_pred hcCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 50 VVKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 50 l~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
....++.|-|||+||.+|..+-.++.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 34568999999999999999988874
No 218
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.52 E-value=1.1 Score=36.97 Aligned_cols=26 Identities=12% Similarity=0.185 Sum_probs=22.0
Q ss_pred hcCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 50 VVKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 50 l~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
....++.|-|||+||.+|..+-.++.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 34568999999999999999988874
No 219
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=85.81 E-value=3 Score=37.23 Aligned_cols=75 Identities=21% Similarity=0.187 Sum_probs=45.9
Q ss_pred CCeEEEeC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-------HHhcC--CCEEEEEeCcchHHHHHHHhhCc
Q 025026 6 SHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC-------KDVVK--DQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 6 ~~~via~D-l~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l-------~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
+-.++.+| .-|.|.|..... ...-++....+|+..+. -+..- .+.+|+|-|+||.-+-.+|..--
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~-----e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGD-----EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred CCceEEEecCcccCccccccc-----ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 45789999 779999974211 11123444444444443 33332 48999999999998877776543
Q ss_pred c---cccceEEec
Q 025026 76 E---ICRGMILLN 85 (259)
Q Consensus 76 ~---~v~~lvli~ 85 (259)
+ ..++++.+.
T Consensus 221 ~~~~~~~~~~nls 233 (498)
T COG2939 221 EDNIALNGNVNLS 233 (498)
T ss_pred HhccccCCceEee
Confidence 4 355555554
No 220
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=85.44 E-value=1.9 Score=33.80 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHHHh---cC--CCEEEEEeCcchHHHHHHHhhCcccccceEEec
Q 025026 35 TFETWASQLNDFCKDV---VK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l---~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~ 85 (259)
.+...++-+..++++. |+ +++.+-|.|+||++|+..+..+|..+.+++-..
T Consensus 70 ~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s 125 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALS 125 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccc
Confidence 4666667777777664 33 468899999999999999999987777765443
No 221
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=85.44 E-value=4.3 Score=35.15 Aligned_cols=56 Identities=13% Similarity=0.237 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhh--Ccc---cccceEEeccchhh
Q 025026 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM--EPE---ICRGMILLNISLRM 90 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~--~p~---~v~~lvli~~~~~~ 90 (259)
.+.+.++-...+++..|-++++|+|-|.||.+++.+... .++ .=+++|+|+++...
T Consensus 177 QL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 177 QLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 344444444444545566789999999999999887542 212 24688999876543
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=84.41 E-value=0.41 Score=41.33 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHH
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQA 70 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 70 (259)
..++++.+.+....++++.+||||+||.++..+
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeeeEE
Confidence 345566666666668999999999999987654
No 223
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=84.33 E-value=1.9 Score=39.78 Aligned_cols=50 Identities=26% Similarity=0.399 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 34 YTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 34 y~~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
-|+.|+.+....|++.--. +.+.++|-|.||++.-..+.+.|+..+++|.
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA 557 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIA 557 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheee
Confidence 4788887766666554322 4689999999999999999999999999876
No 224
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=84.10 E-value=1.3 Score=40.20 Aligned_cols=56 Identities=14% Similarity=0.003 Sum_probs=38.7
Q ss_pred CCCHHHHH---HHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhC--cccccceEEeccch
Q 025026 33 FYTFETWA---SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME--PEICRGMILLNISL 88 (259)
Q Consensus 33 ~y~~~~~a---~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvli~~~~ 88 (259)
.+.+.|+. +.|.+-|.++|.+ +++|.|||-||..+....... ...++++|+++++.
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 45555554 5555667788764 799999999999766655542 34799999998753
No 225
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=83.33 E-value=3.7 Score=33.31 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=26.9
Q ss_pred CEEEEEeCcchHHHHHHHhhCcccccceEEecc
Q 025026 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 86 (259)
++.=||||+|+-+-+.+...++..-++.++|+-
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 456799999999999888888666678888863
No 226
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=82.72 E-value=3.6 Score=36.70 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=35.9
Q ss_pred HHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhCcc---cccceEEeccch
Q 025026 41 SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPE---ICRGMILLNISL 88 (259)
Q Consensus 41 ~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvli~~~~ 88 (259)
+.+.+.|+++|.+ .+.|+|+|-||+.+..+.+. |. ..+++|+.++..
T Consensus 166 kWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 166 KWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 6677789999875 69999999999988776654 33 477777776543
No 227
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.20 E-value=0.98 Score=34.42 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=31.4
Q ss_pred CCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 53 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
.+..+-|.||||.-|..+..+||+...++|.+++.
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 45778899999999999999999999999988763
No 228
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=79.77 E-value=3 Score=32.76 Aligned_cols=56 Identities=23% Similarity=0.557 Sum_probs=39.6
Q ss_pred CCCeEEEecCCCCCCCchhhhh----hcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 183 QCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
..|.+.-+|+.|+++|.+.++. +.......+++.+++.+|.. .|+++.+ +..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~---~~~e~~~-~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST---SPQELDD-LKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---cHHHHHH-HHHHHHH
Confidence 3889999999999999876543 33333337999999999953 4555544 3446654
No 229
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=79.37 E-value=5.3 Score=34.81 Aligned_cols=41 Identities=24% Similarity=0.127 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHHHHhc----CCCEEEEEeCcchHHHHHHHhhCc
Q 025026 35 TFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
|.+..++|+..+++... ..++.|+|.|+|+-|--..-.+-|
T Consensus 304 tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 304 TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 67888999998887764 568999999999987665554444
No 230
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.96 E-value=2.5 Score=37.85 Aligned_cols=48 Identities=17% Similarity=0.155 Sum_probs=32.8
Q ss_pred HHHHHHHH--HhcCCCEEEEEeCcchHHHHHHHhh-----CcccccceEEeccch
Q 025026 41 SQLNDFCK--DVVKDQAFFICNSIGGLVGLQAAVM-----EPEICRGMILLNISL 88 (259)
Q Consensus 41 ~dl~~~l~--~l~~~~~~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvli~~~~ 88 (259)
+.|++.+. .+|..++.|||+|+|+.+.+..... .-+.|.-+++++.+.
T Consensus 433 ~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 433 ELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred HHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 34444432 3456789999999999999976553 223588888887653
No 231
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=77.64 E-value=1.6 Score=38.12 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=60.0
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCEEEEEeCcchHHHHHHHhhCcccccceEE
Q 025026 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 7 ~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 83 (259)
-+-+.+..|=||.|. |.+.++ ...|+..-|+|...+.+++. -++=+--|-|-|||.++.+=.-||+-|.+.|-
T Consensus 89 ~NQl~vEhRfF~~Sr-P~p~DW---~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVa 164 (448)
T PF05576_consen 89 GNQLSVEHRFFGPSR-PEPADW---SYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVA 164 (448)
T ss_pred cceEEEEEeeccCCC-CCCCCc---ccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeee
Confidence 345678889999985 455554 34689999999999998885 25777889999999999999999999999876
Q ss_pred e
Q 025026 84 L 84 (259)
Q Consensus 84 i 84 (259)
-
T Consensus 165 Y 165 (448)
T PF05576_consen 165 Y 165 (448)
T ss_pred e
Confidence 4
No 232
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=76.68 E-value=3 Score=34.78 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=23.9
Q ss_pred HHHHHhcCCCEEEEEeCcchHHHHHHHhh
Q 025026 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 45 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
++++.+|+++-.++|||+|-+.|..++..
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 45677889889999999999998877654
No 233
>PRK10279 hypothetical protein; Provisional
Probab=76.03 E-value=2 Score=36.20 Aligned_cols=36 Identities=25% Similarity=0.142 Sum_probs=28.2
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
+.+.+++.++..-.++|-|+|+.++..||....+.+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l 58 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSAL 58 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHH
Confidence 345566678888889999999999999998765433
No 234
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=75.25 E-value=2 Score=36.40 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhh
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
+.++++..|+++-.++|||+|=+.|+.+|..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 3455677888899999999998888766543
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=74.97 E-value=16 Score=29.30 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHHHh--cCCCEEEEEeCcchHHHHHHHhhC
Q 025026 35 TFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+..+=++.+.+.++.. ..++++++|+|.|+.|+..+..+.
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 3444444455545442 246899999999999999886653
No 236
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=74.84 E-value=4.8 Score=31.45 Aligned_cols=62 Identities=16% Similarity=0.212 Sum_probs=42.8
Q ss_pred CCCCeEEEecCCCCCCCchhhh---hhcCCCCc--ccEEEcCCCCCCCCCCC---hhhHHHHHHHHHHhc
Q 025026 182 PQCPVLIAWGDKDPWEPIELGR---AYGNFDSV--EDFIVLPNVGHCPQDEA---PHLVNPLVESFVTRH 243 (259)
Q Consensus 182 ~~~PvliI~G~~D~~~~~~~~~---~~~~~~~~--~~~~~i~~~GH~~~~e~---p~~~~~~i~~fl~~~ 243 (259)
.+++.|-|=|+.|.+...-... .+...+|. -.-++.+||||+--..= -+++...|.+|+.++
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 3489999999999998765433 23222332 24568889999965544 367888888998753
No 237
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=74.74 E-value=3.6 Score=34.32 Aligned_cols=30 Identities=10% Similarity=-0.032 Sum_probs=24.3
Q ss_pred HHHHHHhcCCCEEEEEeCcchHHHHHHHhh
Q 025026 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 44 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
.++++..|+++..++|||+|=..|..++..
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 355667788889999999999988887654
No 238
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=72.83 E-value=10 Score=26.14 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCCEEEEEeCcch--HHHHHHHhhCcccccceEE
Q 025026 40 ASQLNDFCKDVVKDQAFFICNSIGG--LVGLQAAVMEPEICRGMIL 83 (259)
Q Consensus 40 a~dl~~~l~~l~~~~~~lvGhS~Gg--~ia~~~a~~~p~~v~~lvl 83 (259)
...|..+++.+...+++|||-|=-. -+-..+|.++|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 3557788888888899999965333 3556688899999998865
No 239
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=72.73 E-value=5 Score=33.90 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhC
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+.+.+++.++.--.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 44556666887777999999999999999875
No 240
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=72.34 E-value=4.2 Score=33.69 Aligned_cols=30 Identities=23% Similarity=0.048 Sum_probs=23.7
Q ss_pred HHHHHhc-CCCEEEEEeCcchHHHHHHHhhC
Q 025026 45 DFCKDVV-KDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 45 ~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+++++.+ +.+..++|||+|=+.|..+|...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4455666 88899999999999888877543
No 241
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=72.19 E-value=4.4 Score=37.35 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=47.8
Q ss_pred eEEE-eCCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 8 RVYS-IDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 8 ~via-~Dl~G~G~S~~---~~~~~~~~~~~y~~~~~a~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
.|+| .|.||=|.=.. ...+.. ....+++++.....-|++. | -++..+.|.|.||.++-.+..++|+.+..
T Consensus 500 ~Vla~a~VRGGGe~G~~WHk~G~la--kKqN~f~Dfia~AeyLve~-gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~a 576 (712)
T KOG2237|consen 500 WVLAYANVRGGGEYGEQWHKDGRLA--KKQNSFDDFIACAEYLVEN-GYTQPSKLAIEGGSAGGLLVGACINQRPDLFGA 576 (712)
T ss_pred eEEEEEeeccCcccccchhhccchh--hhcccHHHHHHHHHHHHHc-CCCCccceeEecccCccchhHHHhccCchHhhh
Confidence 3444 48888664322 111111 1234677776655555443 3 24789999999999999999999998877
Q ss_pred eEE
Q 025026 81 MIL 83 (259)
Q Consensus 81 lvl 83 (259)
+|+
T Consensus 577 via 579 (712)
T KOG2237|consen 577 VIA 579 (712)
T ss_pred hhh
Confidence 765
No 242
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=71.86 E-value=5.1 Score=33.74 Aligned_cols=33 Identities=12% Similarity=-0.033 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
+.+-|++.+++.-.+.|-|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 445677778888999999999999999999653
No 243
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=71.26 E-value=5.4 Score=30.35 Aligned_cols=33 Identities=12% Similarity=0.003 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCc
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
+.+.+.+.++..-.++|-|.|+.+|..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334455557777789999999999999999754
No 244
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=69.98 E-value=15 Score=28.65 Aligned_cols=51 Identities=16% Similarity=0.238 Sum_probs=31.3
Q ss_pred CCCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 025026 183 QCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 240 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl 240 (259)
..||+-|+|+++.-..+. .+. .++++.+.+|| ||..-.+ .+.+.+.|.+-+
T Consensus 139 ~~~v~CiyG~~E~d~~cp---~l~--~~~~~~i~lpG-gHHfd~d-y~~La~~Il~~l 189 (192)
T PF06057_consen 139 PAPVQCIYGEDEDDSLCP---SLR--QPGVEVIALPG-GHHFDGD-YDALAKRILDAL 189 (192)
T ss_pred CCeEEEEEcCCCCCCcCc---ccc--CCCcEEEEcCC-CcCCCCC-HHHHHHHHHHHH
Confidence 389999999987643222 222 24688899986 6655554 444544444444
No 245
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=68.65 E-value=16 Score=32.99 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=45.4
Q ss_pred CCeEEEecCCCCCCCchhhhhh----cCCC--------CcccEEEcCCCCCCCCCC--ChhhHHHHHHHHHHhcCCCC
Q 025026 184 CPVLIAWGDKDPWEPIELGRAY----GNFD--------SVEDFIVLPNVGHCPQDE--APHLVNPLVESFVTRHATPP 247 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~----~~~~--------~~~~~~~i~~~GH~~~~e--~p~~~~~~i~~fl~~~~~~~ 247 (259)
--.++.||..|..+|+..+..+ .+.. .-.+++.+||.+|+---. .+-.....|.+|+++...+.
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 6788999999999987654332 1111 224899999999996644 45567788889998654443
No 246
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=68.29 E-value=7.2 Score=32.27 Aligned_cols=32 Identities=19% Similarity=0.010 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhC
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+...+++.++.--.++|-|+|+.++..||...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 34445666787667999999999999999874
No 247
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=67.97 E-value=8.3 Score=30.83 Aligned_cols=29 Identities=21% Similarity=0.019 Sum_probs=23.5
Q ss_pred HHHHhcCCCEEEEEeCcchHHHHHHHhhC
Q 025026 46 FCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 46 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
.+++.+++.-.++|-|.|+.+|..+|..+
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 34445777778999999999999999765
No 248
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=67.77 E-value=15 Score=32.82 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=47.4
Q ss_pred CCeEEEeCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h---cCCCEEEEEeCcchHHHHHHHh----h
Q 025026 6 SHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----V---VKDQAFFICNSIGGLVGLQAAV----M 73 (259)
Q Consensus 6 ~~~via~Dl~-G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~----l---~~~~~~lvGhS~Gg~ia~~~a~----~ 73 (259)
.-.++.+|.| |-|-|-...+.+. .-+-+.-|+|+..++.. + .-.++.|.|-|++|...-.+|. .
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~----~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~ 192 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDY----KTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKG 192 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcC----cCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhc
Confidence 4578889987 7777754332111 12334445565555544 3 2357999999999975555544 2
Q ss_pred C------cccccceEEeccc
Q 025026 74 E------PEICRGMILLNIS 87 (259)
Q Consensus 74 ~------p~~v~~lvli~~~ 87 (259)
. +-.++|+++-|+.
T Consensus 193 N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 193 NKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred cccccCCcccceEEEecCcc
Confidence 2 2357888877764
No 249
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=67.40 E-value=7.8 Score=29.95 Aligned_cols=30 Identities=10% Similarity=-0.077 Sum_probs=23.6
Q ss_pred HHHHHhcCCCEEEEEeCcchHHHHHHHhhC
Q 025026 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 45 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
+.+++.++..=.++|-|.||.+|..+|..+
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334455666678999999999999999864
No 250
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=67.24 E-value=6.1 Score=34.01 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=41.5
Q ss_pred CCCeEEEeCCCC--CCCCCCCCCC-------CCCCCCCCCHHHHHHHHHHH------HHHhcCCCEEEEEeCcchHHHHH
Q 025026 5 KSHRVYSIDLIG--YGYSDKPNPR-------DFFDKPFYTFETWASQLNDF------CKDVVKDQAFFICNSIGGLVGLQ 69 (259)
Q Consensus 5 ~~~~via~Dl~G--~G~S~~~~~~-------~~~~~~~y~~~~~a~dl~~~------l~~l~~~~~~lvGhS~Gg~ia~~ 69 (259)
-+|-|.++|.|| .|+.+..... .+.+ ..+.+..+.+.|.+. -.++...++-++|||+||+-++.
T Consensus 97 ~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~e-rp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 97 YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWE-RPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAME 175 (365)
T ss_pred CceEEEeccCCCcccccCChhhcCCcccchhhhhc-ccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHH
Confidence 358899999999 4554432210 0111 123333333333332 12223458999999999999999
Q ss_pred HHhhCcc
Q 025026 70 AAVMEPE 76 (259)
Q Consensus 70 ~a~~~p~ 76 (259)
.+.-..+
T Consensus 176 laGA~~~ 182 (365)
T COG4188 176 LAGAELD 182 (365)
T ss_pred hcccccc
Confidence 8876554
No 251
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=67.12 E-value=19 Score=29.70 Aligned_cols=56 Identities=14% Similarity=0.004 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHHhc-C-CCEEEEEeCcchHHHHHHHhhCcc-cccceEEeccchhh
Q 025026 35 TFETWASQLNDFCKDVV-K-DQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLRM 90 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~-~-~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvli~~~~~~ 90 (259)
.+.++++-+++.+.... . +=+++||.|-||.++-.++-..|+ .|..+|-++++..+
T Consensus 72 pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 72 PLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred cHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCC
Confidence 35555655555554332 1 249999999999999999988765 49999988876443
No 252
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=65.93 E-value=15 Score=31.09 Aligned_cols=76 Identities=20% Similarity=0.249 Sum_probs=52.1
Q ss_pred CeEEEeCCC-CCCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHhc-------CCCEEEEEeCcchHHHHHHHhhCcc
Q 025026 7 HRVYSIDLI-GYGYSDKPNPRDFFDKPFY--TFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVMEPE 76 (259)
Q Consensus 7 ~~via~Dl~-G~G~S~~~~~~~~~~~~~y--~~~~~a~dl~~~l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~p~ 76 (259)
-.++.+|-| |-|.|--.. ...| +.++.+.|+.++++.+- .-+++++.-|+||-+|..+++.--+
T Consensus 72 adllfvDnPVGaGfSyVdg------~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~ 145 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDG------SSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDD 145 (414)
T ss_pred ccEEEecCCCcCceeeecC------cccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHH
Confidence 345566655 888885422 1233 57888999999998862 2379999999999999888775333
Q ss_pred ---------cccceEEeccch
Q 025026 77 ---------ICRGMILLNISL 88 (259)
Q Consensus 77 ---------~v~~lvli~~~~ 88 (259)
...+++|-+++.
T Consensus 146 aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 146 AIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHhcCceeecceeEEccCccc
Confidence 245666666543
No 253
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=64.67 E-value=16 Score=28.76 Aligned_cols=51 Identities=14% Similarity=-0.102 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEEeCc----chHHHHHHHhhC-cccccceEEe
Q 025026 33 FYTFETWASQLNDFCKDVVKDQAFFICNSI----GGLVGLQAAVME-PEICRGMILL 84 (259)
Q Consensus 33 ~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~----Gg~ia~~~a~~~-p~~v~~lvli 84 (259)
.|+.+.+++-|.+++++.+ -..+|+|+|. |..++..+|.+. --.+..++-+
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 4678888999999888876 6799999998 888999998874 2245555554
No 254
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=63.57 E-value=14 Score=33.24 Aligned_cols=35 Identities=31% Similarity=0.352 Sum_probs=31.6
Q ss_pred CCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 53 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
+.-.+.|.|-||.=++..|-+||+...|++...+.
T Consensus 115 ~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 115 KYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred CceEEEEeCCCcchHHHHHHhChhhcCeEEeCCch
Confidence 46889999999999999999999999999876654
No 255
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=62.12 E-value=8.6 Score=35.18 Aligned_cols=31 Identities=10% Similarity=0.008 Sum_probs=25.7
Q ss_pred HHHH-HHhcCCCEEEEEeCcchHHHHHHHhhC
Q 025026 44 NDFC-KDVVKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 44 ~~~l-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
.+++ +.+|+++-.++|||+|=+.|+..|--.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578899999999999999999988765
No 256
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=61.82 E-value=6.5 Score=34.83 Aligned_cols=39 Identities=10% Similarity=-0.039 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
+...+...++.+-+++|-|.|+.+|..+|...++.+..+
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444456777789999999999999999877775554
No 257
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=61.33 E-value=24 Score=31.10 Aligned_cols=56 Identities=14% Similarity=0.272 Sum_probs=37.5
Q ss_pred CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCCCCC-----hhhHHHHHHHHHH
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA-----PHLVNPLVESFVT 241 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~-----p~~~~~~i~~fl~ 241 (259)
--+|+|+|+.|++..... .+.+--.++.+.+.||+.|...+.. -++....|+.|..
T Consensus 352 ~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 568999999999864321 1222234578899999999977654 2345566666663
No 258
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=60.74 E-value=12 Score=28.52 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=23.9
Q ss_pred HHHHhcCCCEEEEEeCcchHHHHHHHhhCcc
Q 025026 46 FCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (259)
Q Consensus 46 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 76 (259)
.+++.++.-=.++|-|.|+.+|..++...+.
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3444566656799999999999999987643
No 259
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=60.47 E-value=6.6 Score=31.41 Aligned_cols=42 Identities=12% Similarity=0.066 Sum_probs=30.8
Q ss_pred HHHHHhc-CCCEEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 45 DFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 45 ~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
++|+.-+ ..++-++|.-|||-++..+....| .+.+.+..-++
T Consensus 111 k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps 153 (242)
T KOG3043|consen 111 KWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPS 153 (242)
T ss_pred HHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCC
Confidence 3344445 357889999999999999999988 56666665543
No 260
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.68 E-value=13 Score=29.49 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=25.5
Q ss_pred HHHHHhcCCCEEEEEeCcchHHHHHHHhhCcc
Q 025026 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (259)
Q Consensus 45 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 76 (259)
+.+.+.++.--.++|.|.|+.+|..+|...+.
T Consensus 18 ~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~~ 49 (215)
T cd07209 18 KALAEAGIEPDIISGTSIGAINGALIAGGDPE 49 (215)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCcH
Confidence 44555577666799999999999999998753
No 261
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=58.09 E-value=16 Score=32.91 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=36.0
Q ss_pred CCeEEEecCCCCCCCchhh----hhh---cCCCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 184 CPVLIAWGDKDPWEPIELG----RAY---GNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~----~~~---~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
..++...|-.|..++.... +.+ ....+. .+.-+-++|||++.++|+...+.+..|+.-
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~-~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNL-TFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCc-eEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 4555555555554443322 111 222333 344555699999999999999999988864
No 262
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=57.89 E-value=6.5 Score=29.63 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHhc----CCCEEEEEeCcchH
Q 025026 14 LIGYGYSDKPNPRDFFDKPFYTFETWASQL----NDFCKDVV----KDQAFFICNSIGGL 65 (259)
Q Consensus 14 l~G~G~S~~~~~~~~~~~~~y~~~~~a~dl----~~~l~~l~----~~~~~lvGhS~Gg~ 65 (259)
+-|||+.....+. -..++.+.++.-| ..+.+..+ .+++.|||.|++..
T Consensus 61 lVGHG~~~~~~~~----l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQT----LAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSE----ETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCce----eCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 5699987221111 1357889999888 44555543 35799999999887
No 263
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=56.53 E-value=9.5 Score=32.31 Aligned_cols=38 Identities=13% Similarity=-0.006 Sum_probs=28.1
Q ss_pred HHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccce
Q 025026 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (259)
Q Consensus 44 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 81 (259)
...+...++.+-++.|-|.|+.+|..++...++.+..+
T Consensus 87 lkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~ 124 (323)
T cd07231 87 VRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSF 124 (323)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33444457777779999999999999998766555444
No 264
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=55.86 E-value=40 Score=28.33 Aligned_cols=56 Identities=11% Similarity=0.189 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcc-----hHHHHHHHhhCcccccceEEeccch
Q 025026 32 PFYTFETWASQLNDFCKDVVKDQAFFICNSIG-----GLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 32 ~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~G-----g~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
..+++++|.+-+.+++..+|-+ +|+++---- +.|++.-+...|..-.++++|+++.
T Consensus 149 G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 149 GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred CCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 5789999999999999999865 566654333 4455555666888899999998764
No 265
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=54.71 E-value=11 Score=33.05 Aligned_cols=40 Identities=10% Similarity=-0.069 Sum_probs=31.1
Q ss_pred HHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 43 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
+...+...|+.+=++.|-|.|+.||..+|...++.+..+.
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555677777899999999999999997777766664
No 266
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=54.71 E-value=13 Score=21.81 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEE-eCcch
Q 025026 33 FYTFETWASQLNDFCKDVVKDQAFFIC-NSIGG 64 (259)
Q Consensus 33 ~y~~~~~a~dl~~~l~~l~~~~~~lvG-hS~Gg 64 (259)
.+..+.|-.||...|.++.+.++.++| |.-|.
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipGsHns~t 37 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPGSHNSGT 37 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecccccccc
Confidence 356778999999999999999999999 65443
No 267
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=54.31 E-value=12 Score=30.53 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=23.8
Q ss_pred HHHHHhcCC---CE-EEEEeCcchHHHHHHHhhCcccccc
Q 025026 45 DFCKDVVKD---QA-FFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 45 ~~l~~l~~~---~~-~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
+.+.+.++. ++ .++|-|.|+.+|..++. .|+++..
T Consensus 19 ~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~~~ 57 (246)
T cd07222 19 KALLRHGKKLLKRVKRFAGASAGSLVAAVLLT-APEKIEE 57 (246)
T ss_pred HHHHHcCchhhccCCEEEEECHHHHHHHHHhc-ChHHHHH
Confidence 344444543 33 79999999999999994 4554433
No 268
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=53.55 E-value=21 Score=27.04 Aligned_cols=30 Identities=17% Similarity=0.034 Sum_probs=23.0
Q ss_pred HHHHHhcCCCEEEEEeCcchHHHHHHHhhC
Q 025026 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 45 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
..+++.++..-.++|-|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334445666567999999999999999764
No 269
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.16 E-value=9.5 Score=33.63 Aligned_cols=39 Identities=15% Similarity=-0.008 Sum_probs=29.8
Q ss_pred HHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 44 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
...+.+.++.+=+++|-|.|+.+|..+|...++.+..++
T Consensus 86 lkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 86 VKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 333444467666799999999999999998787776653
No 270
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=53.15 E-value=43 Score=30.98 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=46.5
Q ss_pred CCCCeEEEeCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHhcC---CCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 4 AKSHRVYSIDLIGYGYSDKPNPRDF--FDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 4 ~~~~~via~Dl~G~G~S~~~~~~~~--~~~~~y~~~~~a~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
.++.--+.-.+||=|.=.. ..... .....-.++|++.-...++++ |+ ++.-+-|=|-||.+.-....++||..
T Consensus 448 erGg~~v~ANIRGGGEfGp-~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelf 525 (648)
T COG1505 448 ERGGVFVLANIRGGGEFGP-EWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELF 525 (648)
T ss_pred hcCCeEEEEecccCCccCH-HHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhh
Confidence 3444445567888775432 10000 011122455555544444433 44 46789999999999888888999987
Q ss_pred cceEE
Q 025026 79 RGMIL 83 (259)
Q Consensus 79 ~~lvl 83 (259)
..+|+
T Consensus 526 gA~v~ 530 (648)
T COG1505 526 GAAVC 530 (648)
T ss_pred Cceee
Confidence 77754
No 271
>COG0218 Predicted GTPase [General function prediction only]
Probab=52.06 E-value=18 Score=28.37 Aligned_cols=15 Identities=47% Similarity=0.964 Sum_probs=12.1
Q ss_pred EEEeCCCCCCCCCCC
Q 025026 9 VYSIDLIGYGYSDKP 23 (259)
Q Consensus 9 via~Dl~G~G~S~~~ 23 (259)
+...||||||...-|
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 567899999998654
No 272
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.05 E-value=21 Score=29.29 Aligned_cols=32 Identities=13% Similarity=-0.097 Sum_probs=24.1
Q ss_pred HHHHhcCC-CEEEEEeCcchHHHHHHHhhCccc
Q 025026 46 FCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 46 ~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~~ 77 (259)
.+.+.++. -=.++|-|.||.+|..+++..+.+
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 34444565 347999999999999999987554
No 273
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=49.90 E-value=24 Score=28.46 Aligned_cols=33 Identities=12% Similarity=-0.064 Sum_probs=24.7
Q ss_pred HHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhCc
Q 025026 43 LNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 43 l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p 75 (259)
+...+.+.++. .-.++|-|.|+.+|..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444455665 3479999999999999999864
No 274
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=49.79 E-value=9.6 Score=29.96 Aligned_cols=23 Identities=13% Similarity=-0.097 Sum_probs=18.8
Q ss_pred CCeEEEecCCCCCCCchhhhhhc
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYG 206 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~ 206 (259)
.|+++++|++|.++|.+.++.+.
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~ 191 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIR 191 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHH
Confidence 55789999999999988776644
No 275
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=49.06 E-value=18 Score=32.02 Aligned_cols=39 Identities=26% Similarity=0.572 Sum_probs=23.5
Q ss_pred CCeEEEecCCCCCCCchhhhhhcCCCCcccEEEcCCCCCCCC
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 225 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 225 (259)
--|+++.|+.||+......... .+....++||+++|+.=
T Consensus 377 tnviFtNG~~DPW~~lgv~~~~---~~~~~~~~I~g~~Hc~D 415 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSDS---SDSVPAIVIPGGAHCSD 415 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-S---SSSEEEEEETT--TTGG
T ss_pred CeEEeeCCCCCCcccccCCCCC---CCCcccEEECCCeeecc
Confidence 5799999999999765533222 22345678999999844
No 276
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=48.97 E-value=23 Score=32.41 Aligned_cols=56 Identities=7% Similarity=-0.081 Sum_probs=37.4
Q ss_pred CCCCHHHHH---HHHHHHHHHhcC--CCEEEEEeCcchHHHHHHHhh--CcccccceEEeccc
Q 025026 32 PFYTFETWA---SQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--EPEICRGMILLNIS 87 (259)
Q Consensus 32 ~~y~~~~~a---~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvli~~~ 87 (259)
..+.+.|+. +.+.+-|..+|. +++.|+|||.||..+..+..- ......++|.++++
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 345555544 445555777775 479999999999988776653 22456667777654
No 277
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=48.05 E-value=22 Score=31.96 Aligned_cols=37 Identities=16% Similarity=0.085 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcCC--CEEEEEeCcchHHHHHHHhhC-cc
Q 025026 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME-PE 76 (259)
Q Consensus 40 a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~-p~ 76 (259)
.+-|.+.++.||.+ +.+|-|-|||..=|+.+++.. |.
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 34455677888864 699999999999999999884 64
No 278
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=46.95 E-value=22 Score=30.86 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=41.5
Q ss_pred CCeEEEecCCCCCCCchhhhhhcC-CCCcccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcC
Q 025026 184 CPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHA 244 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~ 244 (259)
+|+-.-.+.+|.+-..+ ..++. +.+-..-...+++||+.+.|.|+.+.+-+..|++...
T Consensus 405 vPtg~a~f~~el~~~~~--~~lrdky~nL~~~s~~~~GGhFaalE~p~~La~D~~~FV~~~~ 464 (469)
T KOG2565|consen 405 VPTGCARFKFELWHTSD--DVLRDKYPNLTHSSYHPKGGHFAALEDPKKLAQDFFSFVEKLN 464 (469)
T ss_pred cchhhhccccchhhCcH--HHHhhhcccceeeEeccCCcchhhhhCcHHHHHHHHHHHHHHH
Confidence 77777777777653222 12222 2333456788899999999999999999999997643
No 279
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.92 E-value=13 Score=28.12 Aligned_cols=34 Identities=12% Similarity=-0.023 Sum_probs=27.4
Q ss_pred CCEEEEEeCcchHHHHHHHhhCcccccceEEeccch
Q 025026 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (259)
Q Consensus 53 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 88 (259)
....||+||||=+||-++.-..+ +++.+.++++.
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 45679999999999988877664 78888888753
No 280
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=46.88 E-value=29 Score=28.19 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=24.4
Q ss_pred HHHHHHhcCC--C--EEEEEeCcchHHHHHHHhhCc-cc
Q 025026 44 NDFCKDVVKD--Q--AFFICNSIGGLVGLQAAVMEP-EI 77 (259)
Q Consensus 44 ~~~l~~l~~~--~--~~lvGhS~Gg~ia~~~a~~~p-~~ 77 (259)
...+.+.++. + -.++|-|.|+.+|..+|...+ +.
T Consensus 18 l~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~ 56 (243)
T cd07204 18 ASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEE 56 (243)
T ss_pred HHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHH
Confidence 3344444544 2 379999999999999999864 54
No 281
>PRK12467 peptide synthase; Provisional
Probab=43.15 E-value=1.1e+02 Score=35.71 Aligned_cols=75 Identities=17% Similarity=0.041 Sum_probs=49.3
Q ss_pred cCCCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCEEEEEeCcchHHHHHHHhh---Ccccc
Q 025026 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVM---EPEIC 78 (259)
Q Consensus 3 L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~---~p~~v 78 (259)
|..+..|+.+..++.-.-.++ ..+++.++..-...+.... ..+..+.|+|+||.++..++.. ..+.+
T Consensus 3715 l~~~~~~~~l~~~~~~~d~~~---------~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~ 3785 (3956)
T PRK12467 3715 LEGDRHVLGLTCRHLLDDGWQ---------DTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGESE 3785 (3956)
T ss_pred hCCCCcEEEEeccccccccCC---------ccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCCce
Confidence 344567777777665433332 1256666666666665554 3579999999999999998774 44566
Q ss_pred cceEEecc
Q 025026 79 RGMILLNI 86 (259)
Q Consensus 79 ~~lvli~~ 86 (259)
.-+.+++.
T Consensus 3786 ~~~~~~~~ 3793 (3956)
T PRK12467 3786 AFLGLFDN 3793 (3956)
T ss_pred eEEEEEec
Confidence 66666654
No 282
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=43.01 E-value=62 Score=18.23 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=20.6
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEE
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFI 58 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lv 58 (259)
+.+|..+|+-||+. .++|..+++.+.-+++++|
T Consensus 6 ~a~v~~~~fSgHad--------------------~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 6 RARVEQIDFSGHAD--------------------REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp -SEEEESGCSSS-B--------------------HHHHHHHHHHHCSSEEEEE
T ss_pred EEEEEEEeecCCCC--------------------HHHHHHHHHhcCCCEEEEe
Confidence 45677777777663 2467788888865555443
No 283
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=42.79 E-value=36 Score=28.82 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=15.9
Q ss_pred EEEeCcchHHHHHHHhhC
Q 025026 57 FICNSIGGLVGLQAAVME 74 (259)
Q Consensus 57 lvGhS~Gg~ia~~~a~~~ 74 (259)
+.|.|.||.||..+|..+
T Consensus 36 i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 36 IAGTSTGGILALALLHGK 53 (312)
T ss_pred EEeeChHHHHHHHHHcCC
Confidence 778999999999999754
No 284
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=42.42 E-value=37 Score=27.64 Aligned_cols=24 Identities=17% Similarity=-0.031 Sum_probs=19.5
Q ss_pred EEEEeCcchHHHHHHHhhCc-cccc
Q 025026 56 FFICNSIGGLVGLQAAVMEP-EICR 79 (259)
Q Consensus 56 ~lvGhS~Gg~ia~~~a~~~p-~~v~ 79 (259)
.+.|-|.|+.+|..+|...+ +.+.
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~~~~~~ 57 (245)
T cd07218 33 KISGASAGALAACCLLCDLPLGEMT 57 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCcHHHHH
Confidence 49999999999999998754 4433
No 285
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=40.33 E-value=34 Score=28.80 Aligned_cols=32 Identities=13% Similarity=-0.064 Sum_probs=24.3
Q ss_pred HHHhcCCCEEEEEeCcchHHHHHHHhhCcccc
Q 025026 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (259)
Q Consensus 47 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 78 (259)
+...++..-++.|-|.|+.+|..++....+.+
T Consensus 91 L~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 91 LWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 33446666679999999999999998754444
No 286
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=39.71 E-value=44 Score=27.34 Aligned_cols=27 Identities=19% Similarity=0.160 Sum_probs=21.2
Q ss_pred EEEEEeCcchHHHHHHHhhCc-ccccce
Q 025026 55 AFFICNSIGGLVGLQAAVMEP-EICRGM 81 (259)
Q Consensus 55 ~~lvGhS~Gg~ia~~~a~~~p-~~v~~l 81 (259)
-.++|-|.|+.++..++...+ +++..+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~~~~~~~~ 61 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLPLDQILQI 61 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCCHHHHHHH
Confidence 459999999999999998765 444443
No 287
>PF15660 Imm49: Immunity protein 49
Probab=38.04 E-value=31 Score=21.42 Aligned_cols=22 Identities=18% Similarity=0.678 Sum_probs=18.8
Q ss_pred CCCCHHHHHHHHHHHHHHhcCC
Q 025026 32 PFYTFETWASQLNDFCKDVVKD 53 (259)
Q Consensus 32 ~~y~~~~~a~dl~~~l~~l~~~ 53 (259)
..|.+.+|.+|+..+.+.+..+
T Consensus 62 rlyrlrdwtddladwvdrlrre 83 (84)
T PF15660_consen 62 RLYRLRDWTDDLADWVDRLRRE 83 (84)
T ss_pred hhhhhhhhhhHHHHHHHHHhhc
Confidence 5789999999999999988543
No 288
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.26 E-value=50 Score=26.97 Aligned_cols=21 Identities=14% Similarity=-0.061 Sum_probs=18.4
Q ss_pred EEEEEeCcchHHHHHHHhhCc
Q 025026 55 AFFICNSIGGLVGLQAAVMEP 75 (259)
Q Consensus 55 ~~lvGhS~Gg~ia~~~a~~~p 75 (259)
-.++|-|.|+.+|..+++..+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 458999999999999998764
No 289
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=36.26 E-value=49 Score=18.97 Aligned_cols=32 Identities=19% Similarity=0.044 Sum_probs=21.6
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK 48 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~ 48 (259)
..|.+.+||+||+--.. -|+++..+.+.+.+.
T Consensus 12 ~~y~~~~pdlpg~~t~G------------~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQG------------DTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCEEEE------------SSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhcC------------CCHHHHHHHHHHHHH
Confidence 45899999999886221 257776666665554
No 290
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=36.12 E-value=40 Score=27.51 Aligned_cols=14 Identities=21% Similarity=0.396 Sum_probs=11.9
Q ss_pred CCCEEEEEeCcchH
Q 025026 52 KDQAFFICNSIGGL 65 (259)
Q Consensus 52 ~~~~~lvGhS~Gg~ 65 (259)
+..++++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 46899999999975
No 291
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=34.66 E-value=60 Score=25.10 Aligned_cols=14 Identities=36% Similarity=0.453 Sum_probs=10.8
Q ss_pred eEEEeCCCCCCCCCC
Q 025026 8 RVYSIDLIGYGYSDK 22 (259)
Q Consensus 8 ~via~Dl~G~G~S~~ 22 (259)
++|++| ||||.++.
T Consensus 1 k~I~iD-pGHGg~d~ 14 (189)
T TIGR02883 1 KIIVID-PGHGGIDG 14 (189)
T ss_pred CEEEEe-CCCCCCCC
Confidence 367787 89998775
No 292
>COG3621 Patatin [General function prediction only]
Probab=33.65 E-value=65 Score=27.54 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcC----CCEEEE-EeCcchHHHHHHHhhCccc
Q 025026 39 WASQLNDFCKDVVK----DQAFFI-CNSIGGLVGLQAAVMEPEI 77 (259)
Q Consensus 39 ~a~dl~~~l~~l~~----~~~~lv-GhS~Gg~ia~~~a~~~p~~ 77 (259)
+..++...+++... +.++|+ |.|.||.+++.+|+..+.+
T Consensus 23 i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~~ 66 (394)
T COG3621 23 ILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSPR 66 (394)
T ss_pred HHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCCc
Confidence 34455666666543 346666 5999999999999876543
No 293
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=33.34 E-value=52 Score=27.68 Aligned_cols=16 Identities=13% Similarity=0.231 Sum_probs=14.7
Q ss_pred EEEeCcchHHHHHHHh
Q 025026 57 FICNSIGGLVGLQAAV 72 (259)
Q Consensus 57 lvGhS~Gg~ia~~~a~ 72 (259)
++|-|.||.||..++.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 7789999999999986
No 294
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=32.89 E-value=67 Score=23.89 Aligned_cols=26 Identities=12% Similarity=-0.059 Sum_probs=19.6
Q ss_pred HHHHhcC--CCEEEEEeCcchHHHHHHH
Q 025026 46 FCKDVVK--DQAFFICNSIGGLVGLQAA 71 (259)
Q Consensus 46 ~l~~l~~--~~~~lvGhS~Gg~ia~~~a 71 (259)
.+.+.++ .--.+.|.|.|+.++..++
T Consensus 19 ~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 19 ALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3444455 4456889999999999999
No 295
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=32.24 E-value=24 Score=30.03 Aligned_cols=31 Identities=13% Similarity=0.261 Sum_probs=25.9
Q ss_pred CcccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 025026 210 SVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 240 (259)
Q Consensus 210 ~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl 240 (259)
.|..+.+++.+||++.-++|+....+++.+-
T Consensus 381 knl~f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 381 KNLSFFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred ccceeEEeecccCcccCCCHHHHhhheeecc
Confidence 4567899999999999999998887776543
No 296
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=31.98 E-value=75 Score=27.10 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCCEEEEEeCcch---HHHHHHHhhCcccccceEEeccc
Q 025026 42 QLNDFCKDVVKDQAFFICNSIGG---LVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 42 dl~~~l~~l~~~~~~lvGhS~Gg---~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
.+...+..+...+++|||-| |= -|=.+++.++|+||.++-+=|.+
T Consensus 267 ~l~nil~~~p~~kfvLVGDs-GE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 267 SLRNILRRYPDRKFVLVGDS-GEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHHHhCCCceEEEecCC-CCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 34456777888899999965 32 25566788999999999876654
No 297
>PF15566 Imm18: Immunity protein 18
Probab=31.90 E-value=64 Score=19.31 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCcchH
Q 025026 36 FETWASQLNDFCKDVVKDQAFFICNSIGGL 65 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 65 (259)
+..++++|..+......+..|++--||||-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 566777787777776667799999999985
No 298
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=31.08 E-value=21 Score=21.75 Aligned_cols=24 Identities=13% Similarity=0.250 Sum_probs=18.7
Q ss_pred CCCCCChhhHHHHHHHHHHhcCCC
Q 025026 223 CPQDEAPHLVNPLVESFVTRHATP 246 (259)
Q Consensus 223 ~~~~e~p~~~~~~i~~fl~~~~~~ 246 (259)
.|.+++-..|..+|..||-+++-.
T Consensus 21 hP~WDQ~Rl~~aALa~FL~QnG~~ 44 (57)
T PF10929_consen 21 HPNWDQYRLFQAALAGFLLQNGCQ 44 (57)
T ss_pred CCCchHHHHHHHHHHHHHHHcCch
Confidence 477788888888888888777633
No 299
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=30.31 E-value=1e+02 Score=24.01 Aligned_cols=65 Identities=22% Similarity=0.215 Sum_probs=43.1
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCc--ccccceE
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMI 82 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lv 82 (259)
+++.++.+|=+|....+ ....+++.++++.....+++||=-+..+.-.+..+..+- -.+.++|
T Consensus 82 ~~~D~vlIDT~Gr~~~d---------------~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lI 146 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSPRD---------------EELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLI 146 (196)
T ss_dssp TTSSEEEEEE-SSSSTH---------------HHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEE
T ss_pred cCCCEEEEecCCcchhh---------------HHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEE
Confidence 45889999998876432 244567778888887667887776666666665544432 2478888
Q ss_pred Ee
Q 025026 83 LL 84 (259)
Q Consensus 83 li 84 (259)
+-
T Consensus 147 lT 148 (196)
T PF00448_consen 147 LT 148 (196)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 300
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=29.74 E-value=1.1e+02 Score=25.26 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHH-HHhc-CCCEEEEEeCcchHHHHHHHhh
Q 025026 34 YTFETWASQLNDFC-KDVV-KDQAFFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 34 y~~~~~a~dl~~~l-~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 73 (259)
+.++.-+.+...++ +.+. .+++.|+|+|-|+..|-.+|..
T Consensus 71 ~g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 71 WGIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred cchHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 34555554444443 4443 4578999999999999999865
No 301
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=28.89 E-value=54 Score=28.48 Aligned_cols=69 Identities=16% Similarity=0.045 Sum_probs=50.3
Q ss_pred eCCCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceE
Q 025026 12 IDLIGYGYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (259)
Q Consensus 12 ~Dl~G~G~S~~~~~~~~~-------~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 82 (259)
+.+|||+..+..++..+. ....|+..++++-|..+++..++++. -|.|==|--|..+.+..|.|++++-
T Consensus 288 i~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W~v~~l--~gLs~eg~kArd~l~~l~~rirr~~ 363 (390)
T PLN00179 288 ITMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRWKVEEL--TGLSGEGRRAQDYVCGLPPRIRRLE 363 (390)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCcCcc--cCCCHHHHHHHHHHHHhHHHHHHHH
Confidence 678898877632211100 22469999999666677788888765 5888889999999999999887763
No 302
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=28.72 E-value=56 Score=24.76 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=34.0
Q ss_pred CCCeEEEecCCCCCC-CchhhhhhcCC-CCcccEEEcCCCCCCCC-CCChhhHHHHHHHH
Q 025026 183 QCPVLIAWGDKDPWE-PIELGRAYGNF-DSVEDFIVLPNVGHCPQ-DEAPHLVNPLVESF 239 (259)
Q Consensus 183 ~~PvliI~G~~D~~~-~~~~~~~~~~~-~~~~~~~~i~~~GH~~~-~e~p~~~~~~i~~f 239 (259)
.+|+.++.|++|... +........+. ....+++.++ ++|+-+ .+++..+.+.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 153 AAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 389999999988643 22222223333 2345777777 577765 55666666666554
No 303
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=28.56 E-value=53 Score=36.36 Aligned_cols=28 Identities=21% Similarity=0.139 Sum_probs=22.9
Q ss_pred HHHHHHhcCCCEEEEEeCcchHHHHHHH
Q 025026 44 NDFCKDVVKDQAFFICNSIGGLVGLQAA 71 (259)
Q Consensus 44 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 71 (259)
.+++..+|+.+-.++|||+|=+.|+.+|
T Consensus 665 ~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 665 YKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 3456778898889999999998887765
No 304
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=28.15 E-value=2.3e+02 Score=23.78 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhh-Ccc---cccceEEeccch
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPE---ICRGMILLNISL 88 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~---~v~~lvli~~~~ 88 (259)
..++.+.+.+++.. +++.||. +|-+--+..|.+ +|+ +|+++++|++..
T Consensus 100 ~a~~~i~~~~~~~~-~evtiva--~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 151 (302)
T cd02651 100 HAVDAIIDTLRASP-EPITLVA--TGPLTNIALLLRKYPELAERIKEIVLMGGAL 151 (302)
T ss_pred cHHHHHHHHHHhCC-CCEEEEE--cCchHHHHHHHHHChhhHhhcCEEEEecCCc
Confidence 44555666666544 3677775 488877777775 677 799999998764
No 305
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=27.60 E-value=1e+02 Score=25.87 Aligned_cols=16 Identities=38% Similarity=0.449 Sum_probs=12.8
Q ss_pred CCeEEEeCCCCCCCCCC
Q 025026 6 SHRVYSIDLIGYGYSDK 22 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~ 22 (259)
.-++|++| ||||..++
T Consensus 55 ~~~~IvID-pGHGG~Dp 70 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDT 70 (287)
T ss_pred CCeEEEEE-CCCCCCCC
Confidence 34688999 79998775
No 306
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.26 E-value=68 Score=30.74 Aligned_cols=22 Identities=23% Similarity=0.216 Sum_probs=18.5
Q ss_pred cCCCEEEEEeCcchHHHHHHHh
Q 025026 51 VKDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 51 ~~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
++.--+++|.|+||.+|..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4555679999999999999987
No 307
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=27.08 E-value=58 Score=27.86 Aligned_cols=18 Identities=22% Similarity=0.065 Sum_probs=15.0
Q ss_pred EEEEeCcchHHHHHHHhh
Q 025026 56 FFICNSIGGLVGLQAAVM 73 (259)
Q Consensus 56 ~lvGhS~Gg~ia~~~a~~ 73 (259)
.++|||+|=+.|...|..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 579999999988887754
No 308
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.87 E-value=61 Score=24.23 Aligned_cols=21 Identities=19% Similarity=-0.002 Sum_probs=16.6
Q ss_pred CEEEEEeCcchHHHHHHHhhC
Q 025026 54 QAFFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a~~~ 74 (259)
--.+.|-|.||++|..++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 345899999999998888873
No 309
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=26.54 E-value=72 Score=27.06 Aligned_cols=22 Identities=27% Similarity=0.246 Sum_probs=18.4
Q ss_pred cCCCEEEEEeCcchHHHHHHHh
Q 025026 51 VKDQAFFICNSIGGLVGLQAAV 72 (259)
Q Consensus 51 ~~~~~~lvGhS~Gg~ia~~~a~ 72 (259)
+.++..+.|||+|=+-|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3667799999999998888776
No 310
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=26.10 E-value=1.5e+02 Score=22.47 Aligned_cols=51 Identities=20% Similarity=0.117 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEE-eCcchHHHHHHHhhC-cccccceEEe
Q 025026 33 FYTFETWASQLNDFCKDVVKDQAFFIC-NSIGGLVGLQAAVME-PEICRGMILL 84 (259)
Q Consensus 33 ~y~~~~~a~dl~~~l~~l~~~~~~lvG-hS~Gg~ia~~~a~~~-p~~v~~lvli 84 (259)
.|+.+.+++-|.+++++.+ -..+|+| .+.|+.++-.+|.+. --.+..++-+
T Consensus 73 ~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~~l 125 (181)
T cd01985 73 GYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALLGVPQISDVTKL 125 (181)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHhCCCcceeEEEE
Confidence 4667778888888877755 5677777 455667887777763 2234444443
No 311
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.84 E-value=55 Score=28.18 Aligned_cols=17 Identities=18% Similarity=0.108 Sum_probs=15.3
Q ss_pred EEEeCcchHHHHHHHhh
Q 025026 57 FICNSIGGLVGLQAAVM 73 (259)
Q Consensus 57 lvGhS~Gg~ia~~~a~~ 73 (259)
+.|.|.||.||..+|..
T Consensus 45 IaGTStGgIIAa~la~g 61 (344)
T cd07217 45 VGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEecHHHHHHHHHHcC
Confidence 77899999999999874
No 312
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.64 E-value=56 Score=27.21 Aligned_cols=19 Identities=32% Similarity=0.396 Sum_probs=16.7
Q ss_pred EEEEeCcchHHHHHHHhhC
Q 025026 56 FFICNSIGGLVGLQAAVME 74 (259)
Q Consensus 56 ~lvGhS~Gg~ia~~~a~~~ 74 (259)
.++|-|.||.+|..++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 4888999999999998765
No 313
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=25.40 E-value=1.8e+02 Score=25.59 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=16.2
Q ss_pred CCCeEEEeCCCCCCCCCC
Q 025026 5 KSHRVYSIDLIGYGYSDK 22 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~ 22 (259)
+.|-||.+|.|.|++|.+
T Consensus 289 ~~fDlIilDPPsF~r~k~ 306 (393)
T COG1092 289 EKFDLIILDPPSFARSKK 306 (393)
T ss_pred CcccEEEECCcccccCcc
Confidence 479999999999999965
No 314
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]
Probab=25.38 E-value=2.9e+02 Score=23.52 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhh-Ccc---cccceEEeccchh
Q 025026 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPE---ICRGMILLNISLR 89 (259)
Q Consensus 37 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~---~v~~lvli~~~~~ 89 (259)
...++.|.+.+.+-. +++.|+.- |-+.-+..|++ .|+ +|+.+++|+++..
T Consensus 102 ~~A~~~ii~~l~~~~-g~vtlva~--GPLTNiAlAl~~~P~i~~~ik~iviMGGa~~ 155 (311)
T COG1957 102 KHAVDAIIDTLMANP-GEVTLVAT--GPLTNIALALRKDPEIAKRIKEIVIMGGAFF 155 (311)
T ss_pred CcHHHHHHHHHHhCC-CcEEEEec--CChHHHHHHHHhCcchhhhhcEEEEecCccC
Confidence 456666777666544 78888876 77766666664 455 7999999987643
No 315
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=23.75 E-value=57 Score=26.10 Aligned_cols=22 Identities=14% Similarity=0.119 Sum_probs=18.0
Q ss_pred CCCeEEEecCCCCCCCchhhhh
Q 025026 183 QCPVLIAWGDKDPWEPIELGRA 204 (259)
Q Consensus 183 ~~PvliI~G~~D~~~~~~~~~~ 204 (259)
..|++++||+.|..+.+.-+.+
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~ 190 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQ 190 (220)
T ss_pred CCCEEEEecCCCCccCcchHHH
Confidence 3799999999999988765544
No 316
>PRK13253 citrate lyase subunit gamma; Provisional
Probab=23.59 E-value=1.5e+02 Score=20.13 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchH
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGL 65 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 65 (259)
.|-.-+.+++++++++.+.+.-++.|+.
T Consensus 44 ~i~~vv~~~l~~~~v~~~~i~i~D~GAl 71 (92)
T PRK13253 44 QIRAVILETLAKLGVENAQVKVDDKGAL 71 (92)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcCCCC
Confidence 4445566788889999999999999986
No 317
>PF06857 ACP: Malonate decarboxylase delta subunit (MdcD); InterPro: IPR023439 This family consists of the acyl carrier protein found in malonate decarboxylase and citrate lyase. This subunit has the same covalently bound prosthetic group, derived from and similar to coenzyme A, as does citrate lyase, although this protein and the acyl carrier protein of citrate lyase do not show significant sequence similarity. Both malonyl and acetyl groups are transferred to the prosthetic group for catalysis.
Probab=23.36 E-value=1.5e+02 Score=19.90 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEeCcchH
Q 025026 38 TWASQLNDFCKDVVKDQAFFICNSIGGL 65 (259)
Q Consensus 38 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 65 (259)
.|-+-+.++++.++++.+.+.-++.|+.
T Consensus 43 ~i~~vi~~~l~~~~i~~~~v~i~D~GAl 70 (87)
T PF06857_consen 43 QIRAVIRETLEELGIEDAKVEINDKGAL 70 (87)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCCC
Confidence 3444556788889999999999999986
No 318
>PRK14974 cell division protein FtsY; Provisional
Probab=23.20 E-value=2.9e+02 Score=23.72 Aligned_cols=65 Identities=20% Similarity=0.215 Sum_probs=41.8
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCc--ccccceE
Q 025026 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMI 82 (259)
Q Consensus 5 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lv 82 (259)
.++.++.+|-+|...++. .+.+.+..+.+.......+||.-+.-|.=+..-+..+- -.+.++|
T Consensus 221 ~~~DvVLIDTaGr~~~~~---------------~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giI 285 (336)
T PRK14974 221 RGIDVVLIDTAGRMHTDA---------------NLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVI 285 (336)
T ss_pred CCCCEEEEECCCccCCcH---------------HHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEE
Confidence 457899999987765432 23345556666566667788887777766665555543 3577777
Q ss_pred Ee
Q 025026 83 LL 84 (259)
Q Consensus 83 li 84 (259)
+-
T Consensus 286 lT 287 (336)
T PRK14974 286 LT 287 (336)
T ss_pred Ee
Confidence 74
No 319
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=23.10 E-value=4.4e+02 Score=21.85 Aligned_cols=64 Identities=13% Similarity=0.057 Sum_probs=41.4
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEE-eCcchHHHHHHHhhC-cccccceEE
Q 025026 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC-NSIGGLVGLQAAVME-PEICRGMIL 83 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~~~~lvG-hS~Gg~ia~~~a~~~-p~~v~~lvl 83 (259)
++.++.+|-+|....+. ...+.+.++++.......+||- -++++.-+...+.++ +-.+.++|+
T Consensus 154 ~~D~ViIDt~Gr~~~~~---------------~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYRAS---------------ETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcCCH---------------HHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 58999999999864321 1233444555544444567665 467887887777775 446888887
Q ss_pred e
Q 025026 84 L 84 (259)
Q Consensus 84 i 84 (259)
-
T Consensus 219 T 219 (270)
T PRK06731 219 T 219 (270)
T ss_pred E
Confidence 4
No 320
>PF04814 HNF-1_N: Hepatocyte nuclear factor 1 (HNF-1), N terminus; InterPro: IPR006899 This domain consists of the N terminus of homeobox-containing transcription factor HNF-1. This region contains a dimerisation sequence [] and an acidic region that may be involved in transcription activation. Mutations and the common Ala/Val 98 polymorphism in HNF-1 cause the type 3 form of maturity-onset diabetes of the young (MODY3) [].; GO: 0045893 positive regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2GYP_B 1IC8_B 2H8R_B 1G2Y_D 1F93_H 1G39_D 1G2Z_B 1JB6_B.
Probab=22.94 E-value=51 Score=25.40 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=23.5
Q ss_pred CCCCChhhHHHHHHHHHHhcCCCCcccccee
Q 025026 224 PQDEAPHLVNPLVESFVTRHATPPASVSAAS 254 (259)
Q Consensus 224 ~~~e~p~~~~~~i~~fl~~~~~~~~~~~~~~ 254 (259)
++-++|-.+.+.|+.|+..+..+++-|+-+|
T Consensus 111 llr~D~~~VkeeIK~fl~~h~IsQ~~V~q~T 141 (180)
T PF04814_consen 111 LLRRDPWRVKEEIKAFLQQHNISQREVVQVT 141 (180)
T ss_dssp CTTS-HHHHHHHHHHHHHHCT--CHHHHHHH
T ss_pred HHhhCHHHHHHHHHHHHHHcCCcHHHHHHHh
Confidence 5678999999999999999998887666554
No 321
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases. ; GO: 0008168 methyltransferase activity
Probab=22.87 E-value=1.3e+02 Score=27.34 Aligned_cols=46 Identities=9% Similarity=-0.002 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhhCcccccc
Q 025026 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (259)
Q Consensus 35 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 80 (259)
..+.|+++|.+++.....+.-+=+|-+.|+.+|.-.|...+..|..
T Consensus 97 Ga~~Yid~i~~~~~~~~~~g~iR~~LDvGcG~aSF~a~l~~r~V~t 142 (506)
T PF03141_consen 97 GADHYIDQIAEMIPLIKWGGGIRTALDVGCGVASFGAYLLERNVTT 142 (506)
T ss_pred CHHHHHHHHHHHhhccccCCceEEEEeccceeehhHHHHhhCCceE
Confidence 5778898888888765555667889999999998888776654443
No 322
>PRK07877 hypothetical protein; Provisional
Probab=22.21 E-value=1.4e+02 Score=28.69 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=29.5
Q ss_pred HHHhcCCCEEEEEeCcchHHHHHHHhhCcccccceEEecc
Q 025026 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (259)
Q Consensus 47 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 86 (259)
-+.|...++.+||-++|+.++..+|...= |..++++|.
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~LaraGv--vG~l~lvD~ 139 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAEGL--CGELRLADF 139 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHccC--CCeEEEEcC
Confidence 34455678999999999999988887631 378889874
No 323
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=22.18 E-value=81 Score=24.52 Aligned_cols=27 Identities=7% Similarity=-0.093 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEEeCc
Q 025026 36 FETWASQLNDFCKDVVKDQAFFICNSI 62 (259)
Q Consensus 36 ~~~~a~dl~~~l~~l~~~~~~lvGhS~ 62 (259)
++.++..+..+++++++....++||+-
T Consensus 132 ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 455556666667777776678999963
No 324
>PLN02717 uridine nucleosidase
Probab=21.98 E-value=3.4e+02 Score=23.01 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEEeCcchHHHHHHHhh-Ccc---cccceEEeccch
Q 025026 39 WASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPE---ICRGMILLNISL 88 (259)
Q Consensus 39 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~---~v~~lvli~~~~ 88 (259)
-++.|.+.+.+.. +++.||.- |-+.-+..|++ +|+ +|+++++|+++.
T Consensus 104 A~~~i~~~~~~~~-~~itiva~--GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 154 (316)
T PLN02717 104 AAEFLVEKVSEYP-GEVTVVAL--GPLTNLALAIKLDPSFAKKVGQIVVLGGAF 154 (316)
T ss_pred HHHHHHHHHHhCC-CCEEEEEC--CcHHHHHHHHHHChHHHhhcCEEEEeCCCc
Confidence 4455666665543 57777765 88866666665 577 799999998764
No 325
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=21.36 E-value=64 Score=18.38 Aligned_cols=13 Identities=31% Similarity=0.526 Sum_probs=9.9
Q ss_pred eEEEeCCCCCCCC
Q 025026 8 RVYSIDLIGYGYS 20 (259)
Q Consensus 8 ~via~Dl~G~G~S 20 (259)
.+-+-|.||||+-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 3557799999974
No 326
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=21.35 E-value=1.2e+02 Score=24.74 Aligned_cols=16 Identities=25% Similarity=0.111 Sum_probs=13.3
Q ss_pred CCeEEEeCCCCCCCCC
Q 025026 6 SHRVYSIDLIGYGYSD 21 (259)
Q Consensus 6 ~~~via~Dl~G~G~S~ 21 (259)
++++..+|.||++.+.
T Consensus 78 g~~i~vIDTPGl~~~~ 93 (249)
T cd01853 78 GFKLNIIDTPGLLESV 93 (249)
T ss_pred CeEEEEEECCCcCcch
Confidence 4678899999999773
No 327
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=21.02 E-value=2.1e+02 Score=21.49 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEEe-CcchHHHHHHHhhC
Q 025026 33 FYTFETWASQLNDFCKDVVKDQAFFICN-SIGGLVGLQAAVME 74 (259)
Q Consensus 33 ~y~~~~~a~dl~~~l~~l~~~~~~lvGh-S~Gg~ia~~~a~~~ 74 (259)
.|+.+.+++-|.+++++.+ ...+|+|+ +.|.-++-.+|.+.
T Consensus 65 ~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 65 HYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred ccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 3667778888888887755 46777775 45666777777764
No 328
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=20.79 E-value=1.3e+02 Score=20.93 Aligned_cols=49 Identities=18% Similarity=0.063 Sum_probs=32.9
Q ss_pred eEEEeCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEeCcch
Q 025026 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGG 64 (259)
Q Consensus 8 ~via~Dl~G~G~S~~~~~~~~~~~~~y~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg 64 (259)
..|.+.+-|.+....+ ..-.++.+++.+..++++.++. +-.|+||....
T Consensus 68 ~sigIe~~g~~~~~~~--------~~~q~~~~~~L~~~l~~~~~i~~~~~i~~H~~~~ 117 (126)
T cd06583 68 YSIGIELIGNFDGGPP--------TAAQLEALAELLAYLVKRYGIPPDYRIVGHRDVS 117 (126)
T ss_pred ceEEEEEEeCCCCCCC--------CHHHHHHHHHHHHHHHHhCCCCCCCEEEecccCC
Confidence 4456666666554221 1235777777788888888886 78899998754
No 329
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.46 E-value=1.8e+02 Score=24.42 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=24.7
Q ss_pred CEEEEEeCcchHHHHHHH---hhCcccccceEEeccc
Q 025026 54 QAFFICNSIGGLVGLQAA---VMEPEICRGMILLNIS 87 (259)
Q Consensus 54 ~~~lvGhS~Gg~ia~~~a---~~~p~~v~~lvli~~~ 87 (259)
|++|.|-|+|++-+...- ...-+++.+.+..+++
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 699999999998666542 2334568888887654
No 330
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=20.24 E-value=78 Score=20.24 Aligned_cols=30 Identities=27% Similarity=0.474 Sum_probs=20.6
Q ss_pred EEEEEeCcchHHHHHHHhhCcccccceEEeccc
Q 025026 55 AFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (259)
Q Consensus 55 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 87 (259)
+.+|| ||.++.++|....+.=..+.++...
T Consensus 2 vvViG---gG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 2 VVVIG---GGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEES---SSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred EEEEC---cCHHHHHHHHHHHHhCcEEEEEecc
Confidence 56777 6778888777765555677777643
No 331
>PRK04940 hypothetical protein; Provisional
Probab=20.20 E-value=2.4e+02 Score=21.82 Aligned_cols=53 Identities=9% Similarity=-0.076 Sum_probs=34.5
Q ss_pred CCeEEEecCCCCCCCchhhhh-hcCCCCcc-cEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 025026 184 CPVLIAWGDKDPWEPIELGRA-YGNFDSVE-DFIVLPNVGHCPQDEAPHLVNPLVESFVTR 242 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~-~~~~~~~~-~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 242 (259)
-..+++..+.|.....+.+.. +. +. ++.+.+|+.|-. +.=+.....|.+|++.
T Consensus 125 ~r~~vllq~gDEvLDyr~a~~~y~----~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRTAEELH----PYYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred ccEEEEEeCCCcccCHHHHHHHhc----cCceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 346888899999988765543 32 23 667777766642 3344566777778743
No 332
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=20.20 E-value=1.1e+02 Score=23.48 Aligned_cols=12 Identities=8% Similarity=0.235 Sum_probs=9.6
Q ss_pred CCEEEEEeCcch
Q 025026 53 DQAFFICNSIGG 64 (259)
Q Consensus 53 ~~~~lvGhS~Gg 64 (259)
...+|||||+--
T Consensus 101 ~~tILVGHsL~n 112 (174)
T cd06143 101 LGCIFVGHGLAK 112 (174)
T ss_pred CCCEEEeccchh
Confidence 456899999865
No 333
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=20.03 E-value=70 Score=29.77 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=28.9
Q ss_pred CCeEEEecCCCCCCCchhhhh-hcCC-------CCcccEEEcCCCCCC
Q 025026 184 CPVLIAWGDKDPWEPIELGRA-YGNF-------DSVEDFIVLPNVGHC 223 (259)
Q Consensus 184 ~PvliI~G~~D~~~~~~~~~~-~~~~-------~~~~~~~~i~~~GH~ 223 (259)
.|.+|++|+.|-++|.-.+.+ +..+ ....+.+.+.++-|+
T Consensus 556 KPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 556 KPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 899999999999999765422 2211 123467888999998
Done!