Query 025027
Match_columns 259
No_of_seqs 125 out of 1503
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 09:23:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025027.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025027hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3043 Predicted hydrolase re 100.0 6E-36 1.3E-40 227.3 21.1 236 20-255 3-241 (242)
2 PF01738 DLH: Dienelactone hyd 100.0 3.5E-31 7.5E-36 211.2 15.8 206 45-255 1-218 (218)
3 COG0412 Dienelactone hydrolase 100.0 2.3E-27 4.9E-32 190.0 20.5 212 43-256 12-235 (236)
4 PRK13604 luxD acyl transferase 99.9 4.2E-23 9.2E-28 168.7 21.6 171 45-226 22-246 (307)
5 PHA02857 monoglyceride lipase; 99.9 2.4E-22 5.1E-27 165.8 21.1 197 40-255 6-274 (276)
6 COG1647 Esterase/lipase [Gener 99.9 4.9E-23 1.1E-27 156.8 14.4 175 56-252 15-242 (243)
7 PLN02298 hydrolase, alpha/beta 99.9 8.7E-22 1.9E-26 166.6 21.4 204 36-256 34-319 (330)
8 KOG1455 Lysophospholipase [Lip 99.9 6.4E-22 1.4E-26 157.9 18.4 199 38-254 31-312 (313)
9 PLN02385 hydrolase; alpha/beta 99.9 9.5E-22 2E-26 167.6 20.8 199 41-256 68-347 (349)
10 COG1506 DAP2 Dipeptidyl aminop 99.9 4E-22 8.8E-27 180.8 18.9 203 40-257 371-619 (620)
11 PF00326 Peptidase_S9: Prolyl 99.9 1.1E-22 2.5E-27 161.5 11.9 170 73-257 3-212 (213)
12 PRK10566 esterase; Provisional 99.9 4.4E-21 9.5E-26 155.9 21.2 194 43-255 10-249 (249)
13 PRK10749 lysophospholipase L2; 99.9 4E-21 8.7E-26 162.4 20.0 206 37-254 33-329 (330)
14 PLN02652 hydrolase; alpha/beta 99.9 5.2E-21 1.1E-25 164.4 19.9 180 56-256 136-389 (395)
15 COG2267 PldB Lysophospholipase 99.9 2.8E-20 6E-25 154.2 20.3 206 35-257 10-297 (298)
16 PRK11460 putative hydrolase; P 99.9 3.7E-20 8E-25 148.7 18.7 179 56-256 16-210 (232)
17 PLN02824 hydrolase, alpha/beta 99.9 8.5E-20 1.8E-24 151.9 19.5 196 37-254 10-294 (294)
18 PF12695 Abhydrolase_5: Alpha/ 99.8 4E-20 8.7E-25 137.6 14.1 142 58-224 1-145 (145)
19 PRK05077 frsA fermentation/res 99.8 2.1E-19 4.6E-24 155.6 19.8 181 45-255 181-413 (414)
20 TIGR03343 biphenyl_bphD 2-hydr 99.8 1.7E-18 3.7E-23 143.1 21.1 181 44-252 19-281 (282)
21 PRK00870 haloalkane dehalogena 99.8 3.1E-18 6.8E-23 143.1 20.5 195 36-254 20-301 (302)
22 PRK03592 haloalkane dehalogena 99.8 2.5E-18 5.3E-23 143.2 19.8 192 36-256 8-291 (295)
23 TIGR03100 hydr1_PEP hydrolase, 99.8 2.1E-18 4.6E-23 142.1 19.0 185 45-253 14-274 (274)
24 PF02230 Abhydrolase_2: Phosph 99.8 5.8E-19 1.2E-23 140.5 15.1 190 49-255 6-216 (216)
25 TIGR02240 PHA_depoly_arom poly 99.8 1.6E-18 3.4E-23 143.1 18.0 187 38-254 5-266 (276)
26 PRK06489 hypothetical protein; 99.8 6.2E-18 1.4E-22 144.7 20.6 195 41-256 46-359 (360)
27 TIGR03056 bchO_mg_che_rel puta 99.8 1.1E-17 2.3E-22 137.6 20.7 189 36-252 7-278 (278)
28 TIGR01607 PST-A Plasmodium sub 99.8 2.7E-18 5.8E-23 145.1 17.0 160 74-252 64-331 (332)
29 PRK10673 acyl-CoA esterase; Pr 99.8 9.2E-18 2E-22 136.6 18.5 170 54-253 14-254 (255)
30 KOG4178 Soluble epoxide hydrol 99.8 9.7E-18 2.1E-22 136.1 18.2 195 35-254 22-320 (322)
31 PLN02965 Probable pheophorbida 99.8 4.5E-18 9.8E-23 138.7 16.4 169 58-253 5-252 (255)
32 TIGR03611 RutD pyrimidine util 99.8 1E-17 2.2E-22 135.8 18.2 170 55-252 12-256 (257)
33 PRK10349 carboxylesterase BioH 99.8 1.2E-17 2.5E-22 136.3 18.3 162 57-252 14-254 (256)
34 PRK10162 acetyl esterase; Prov 99.8 2.3E-17 5E-22 138.6 18.6 188 45-256 69-317 (318)
35 TIGR02427 protocat_pcaD 3-oxoa 99.8 2.5E-17 5.5E-22 132.5 15.8 168 56-252 13-251 (251)
36 PLN02679 hydrolase, alpha/beta 99.8 2.6E-16 5.6E-21 134.6 21.7 189 41-253 67-356 (360)
37 TIGR01250 pro_imino_pep_2 prol 99.8 2.1E-16 4.5E-21 130.0 20.5 174 54-252 23-288 (288)
38 TIGR01738 bioH putative pimelo 99.8 6.1E-17 1.3E-21 129.9 16.8 161 57-251 5-245 (245)
39 PLN03087 BODYGUARD 1 domain co 99.8 1.1E-16 2.4E-21 139.8 18.9 187 41-253 182-478 (481)
40 PLN02578 hydrolase 99.8 3.9E-16 8.5E-21 133.3 21.8 182 40-252 71-353 (354)
41 COG2945 Predicted hydrolase of 99.7 6.7E-17 1.4E-21 120.9 14.4 180 45-252 16-205 (210)
42 TIGR01836 PHA_synth_III_C poly 99.7 9.8E-17 2.1E-21 136.8 17.5 194 37-254 39-350 (350)
43 PF05448 AXE1: Acetyl xylan es 99.7 1.2E-16 2.5E-21 133.5 17.5 190 45-254 69-320 (320)
44 PLN02511 hydrolase 99.7 1.5E-16 3.3E-21 137.1 18.4 184 55-256 99-367 (388)
45 PRK10985 putative hydrolase; P 99.7 2.5E-16 5.5E-21 132.8 19.2 182 56-256 58-322 (324)
46 PRK03204 haloalkane dehalogena 99.7 5.3E-16 1.1E-20 128.7 20.8 187 35-251 14-285 (286)
47 TIGR02821 fghA_ester_D S-formy 99.7 3.9E-16 8.4E-21 128.7 19.7 108 134-254 136-274 (275)
48 KOG1552 Predicted alpha/beta h 99.7 1.6E-16 3.6E-21 124.7 16.4 184 45-256 48-254 (258)
49 PRK07581 hypothetical protein; 99.7 1.3E-16 2.8E-21 135.5 15.8 198 41-256 22-338 (339)
50 PRK08775 homoserine O-acetyltr 99.7 5.6E-17 1.2E-21 137.9 13.1 186 41-254 42-339 (343)
51 PRK11126 2-succinyl-6-hydroxy- 99.7 6.8E-16 1.5E-20 124.6 17.8 160 57-253 3-241 (242)
52 PLN02872 triacylglycerol lipas 99.7 1.1E-16 2.4E-21 137.4 13.2 203 39-257 49-392 (395)
53 COG0400 Predicted esterase [Ge 99.7 3.5E-16 7.6E-21 121.9 14.7 106 134-255 97-206 (207)
54 TIGR03695 menH_SHCHC 2-succiny 99.7 4.9E-16 1.1E-20 124.8 16.1 168 57-252 2-251 (251)
55 PRK14875 acetoin dehydrogenase 99.7 7E-16 1.5E-20 132.4 18.0 185 37-253 111-370 (371)
56 PRK11071 esterase YqiA; Provis 99.7 4.8E-16 1E-20 121.0 15.3 152 57-252 2-189 (190)
57 PLN02442 S-formylglutathione h 99.7 1.6E-15 3.5E-20 125.4 18.8 180 44-225 31-263 (283)
58 PF06500 DUF1100: Alpha/beta h 99.7 2.6E-16 5.6E-21 132.8 14.2 180 45-255 177-410 (411)
59 PLN02211 methyl indole-3-aceta 99.7 2.5E-15 5.3E-20 123.8 19.0 168 42-227 4-253 (273)
60 PLN03084 alpha/beta hydrolase 99.7 2.7E-15 5.9E-20 128.5 19.2 190 38-253 108-383 (383)
61 PLN02894 hydrolase, alpha/beta 99.7 5.3E-15 1.1E-19 128.1 21.2 179 54-257 103-388 (402)
62 PRK10115 protease 2; Provision 99.7 2.1E-15 4.6E-20 138.1 19.5 186 54-256 443-677 (686)
63 PF08840 BAAT_C: BAAT / Acyl-C 99.7 4.8E-16 1E-20 123.0 13.1 137 121-257 4-213 (213)
64 PF12697 Abhydrolase_6: Alpha/ 99.7 8.9E-16 1.9E-20 121.4 14.1 152 59-227 1-219 (228)
65 KOG4391 Predicted alpha/beta h 99.7 1.9E-15 4.1E-20 115.1 14.6 185 45-256 67-284 (300)
66 TIGR01249 pro_imino_pep_1 prol 99.7 7.3E-15 1.6E-19 123.0 19.0 189 36-254 6-305 (306)
67 PLN00021 chlorophyllase 99.7 8.1E-15 1.8E-19 122.3 19.1 195 43-258 37-287 (313)
68 PRK00175 metX homoserine O-ace 99.7 2.6E-15 5.6E-20 129.3 15.4 71 176-257 306-377 (379)
69 TIGR01840 esterase_phb esteras 99.6 5.5E-15 1.2E-19 117.3 14.6 146 55-207 12-196 (212)
70 KOG2984 Predicted hydrolase [G 99.6 8.3E-16 1.8E-20 115.8 9.0 194 36-254 22-276 (277)
71 TIGR01392 homoserO_Ac_trn homo 99.6 5.3E-15 1.2E-19 126.2 15.3 65 177-252 286-351 (351)
72 PF03403 PAF-AH_p_II: Platelet 99.6 3.9E-15 8.4E-20 127.2 13.6 196 57-256 100-360 (379)
73 COG3571 Predicted hydrolase of 99.6 6.7E-14 1.4E-18 101.7 17.0 191 48-253 5-210 (213)
74 KOG1454 Predicted hydrolase/ac 99.6 1.8E-14 3.9E-19 120.8 15.4 173 55-254 57-324 (326)
75 COG0429 Predicted hydrolase of 99.6 2.3E-14 5E-19 116.4 15.0 194 45-257 62-343 (345)
76 COG3458 Acetyl esterase (deace 99.6 1.2E-14 2.6E-19 114.3 12.4 190 45-254 69-317 (321)
77 KOG4667 Predicted esterase [Li 99.6 2.3E-14 5E-19 109.1 13.5 158 56-227 33-242 (269)
78 KOG4409 Predicted hydrolase/ac 99.6 1E-13 2.2E-18 113.4 17.5 186 43-253 74-363 (365)
79 COG0657 Aes Esterase/lipase [L 99.6 8.9E-14 1.9E-18 116.8 18.0 173 55-254 78-310 (312)
80 PLN02980 2-oxoglutarate decarb 99.6 7.3E-14 1.6E-18 138.5 18.5 183 56-255 1371-1640(1655)
81 TIGR01838 PHA_synth_I poly(R)- 99.6 2.3E-13 4.9E-18 120.4 17.7 174 36-226 164-457 (532)
82 KOG2564 Predicted acetyltransf 99.6 4E-14 8.7E-19 111.9 10.8 115 44-166 61-179 (343)
83 KOG1515 Arylacetamide deacetyl 99.5 1.2E-12 2.6E-17 109.2 19.5 188 41-254 70-335 (336)
84 PRK07868 acyl-CoA synthetase; 99.5 2.9E-13 6.4E-18 129.6 18.1 198 36-256 39-363 (994)
85 PRK05855 short chain dehydroge 99.5 1.8E-13 3.8E-18 124.3 15.5 191 37-254 5-292 (582)
86 PF12740 Chlorophyllase2: Chlo 99.5 9.6E-13 2.1E-17 105.2 17.4 181 58-258 18-254 (259)
87 PF12715 Abhydrolase_7: Abhydr 99.5 4.2E-14 9.1E-19 117.7 9.6 172 45-220 101-343 (390)
88 TIGR03101 hydr2_PEP hydrolase, 99.5 1.8E-12 3.8E-17 105.6 18.4 169 45-226 12-246 (266)
89 PRK05371 x-prolyl-dipeptidyl a 99.5 4.8E-13 1E-17 123.6 16.9 162 75-257 270-522 (767)
90 KOG2281 Dipeptidyl aminopeptid 99.5 6.5E-13 1.4E-17 115.5 16.5 194 45-253 626-866 (867)
91 KOG2100 Dipeptidyl aminopeptid 99.5 4.7E-13 1E-17 123.4 16.3 202 41-257 504-750 (755)
92 PF07859 Abhydrolase_3: alpha/ 99.5 9.3E-14 2E-18 110.0 10.2 149 59-226 1-210 (211)
93 COG4188 Predicted dienelactone 99.5 2.4E-13 5.1E-18 112.5 11.1 165 56-225 70-295 (365)
94 KOG2382 Predicted alpha/beta h 99.5 1.8E-12 3.9E-17 105.6 13.5 175 54-254 50-313 (315)
95 PF02273 Acyl_transf_2: Acyl t 99.4 4.2E-12 9.1E-17 98.8 14.1 171 45-226 15-239 (294)
96 COG4757 Predicted alpha/beta h 99.4 5.8E-12 1.3E-16 97.2 14.6 184 48-251 21-280 (281)
97 KOG1838 Alpha/beta hydrolase [ 99.4 2.8E-11 6.1E-16 101.9 18.5 106 55-169 124-236 (409)
98 PF02129 Peptidase_S15: X-Pro 99.4 9.8E-12 2.1E-16 102.4 15.7 132 80-224 53-271 (272)
99 TIGR00976 /NonD putative hydro 99.4 1.7E-11 3.7E-16 110.5 18.1 112 45-167 9-130 (550)
100 PF08538 DUF1749: Protein of u 99.4 2.1E-12 4.5E-17 105.1 10.6 197 37-252 11-303 (303)
101 COG3208 GrsT Predicted thioest 99.4 2.5E-11 5.4E-16 95.1 15.9 151 54-227 5-219 (244)
102 PF06821 Ser_hydrolase: Serine 99.4 1.3E-11 2.8E-16 94.1 14.0 134 59-225 1-154 (171)
103 TIGR01839 PHA_synth_II poly(R) 99.4 1.3E-11 2.9E-16 108.4 15.9 173 35-224 190-481 (560)
104 PF07224 Chlorophyllase: Chlor 99.4 3.1E-11 6.6E-16 95.0 15.6 193 46-258 34-278 (307)
105 KOG3847 Phospholipase A2 (plat 99.4 2E-11 4.2E-16 98.2 14.4 197 56-256 117-373 (399)
106 PRK06765 homoserine O-acetyltr 99.4 8.2E-12 1.8E-16 107.4 13.2 66 177-253 321-387 (389)
107 KOG2551 Phospholipase/carboxyh 99.3 1.2E-10 2.6E-15 89.6 16.0 180 56-255 5-221 (230)
108 PF05728 UPF0227: Uncharacteri 99.3 7.4E-11 1.6E-15 90.9 14.5 149 59-251 2-186 (187)
109 PF00561 Abhydrolase_1: alpha/ 99.3 1.4E-11 3.1E-16 98.1 10.5 128 85-226 1-217 (230)
110 PF06342 DUF1057: Alpha/beta h 99.3 1.7E-10 3.7E-15 92.2 16.2 139 56-205 35-238 (297)
111 KOG2112 Lysophospholipase [Lip 99.3 1.5E-10 3.3E-15 88.5 14.0 179 58-253 4-203 (206)
112 PF03959 FSH1: Serine hydrolas 99.3 2.5E-11 5.4E-16 96.2 10.1 165 56-226 4-203 (212)
113 TIGR01849 PHB_depoly_PhaZ poly 99.3 4.7E-10 1E-14 95.9 17.9 187 45-254 86-406 (406)
114 PF06057 VirJ: Bacterial virul 99.3 7.3E-11 1.6E-15 89.6 11.5 160 57-253 3-191 (192)
115 PF10503 Esterase_phd: Esteras 99.3 2.8E-10 6.2E-15 89.8 15.0 144 57-207 17-197 (220)
116 KOG4627 Kynurenine formamidase 99.2 2.1E-11 4.6E-16 92.4 6.4 157 49-225 60-248 (270)
117 KOG2624 Triglyceride lipase-ch 99.2 6E-10 1.3E-14 95.1 14.7 208 38-255 52-399 (403)
118 PRK10439 enterobactin/ferric e 99.2 3.4E-09 7.5E-14 91.8 19.7 168 45-225 194-392 (411)
119 PF03583 LIP: Secretory lipase 99.2 3.5E-10 7.6E-15 93.7 12.4 67 179-259 219-286 (290)
120 PF10230 DUF2305: Uncharacteri 99.1 2.7E-09 5.9E-14 87.3 14.8 165 56-226 2-266 (266)
121 COG4099 Predicted peptidase [G 99.1 2.9E-10 6.2E-15 91.0 7.9 112 134-253 267-384 (387)
122 PF00975 Thioesterase: Thioest 99.0 1.5E-08 3.3E-13 81.1 14.6 169 57-251 1-229 (229)
123 COG3509 LpqC Poly(3-hydroxybut 99.0 5.8E-09 1.3E-13 83.9 11.4 205 45-257 47-310 (312)
124 PF12048 DUF3530: Protein of u 99.0 5.7E-07 1.2E-11 75.2 23.8 185 57-254 88-309 (310)
125 cd00707 Pancreat_lipase_like P 99.0 1.5E-09 3.2E-14 89.4 7.8 106 55-169 35-147 (275)
126 COG3243 PhaC Poly(3-hydroxyalk 99.0 1.1E-08 2.4E-13 86.1 12.6 172 37-225 84-371 (445)
127 PF09752 DUF2048: Uncharacteri 99.0 1.7E-08 3.7E-13 83.7 13.4 160 57-225 92-329 (348)
128 KOG3253 Predicted alpha/beta h 98.9 4.2E-08 9.2E-13 85.6 14.1 92 134-229 248-350 (784)
129 TIGR03230 lipo_lipase lipoprot 98.9 3.4E-08 7.3E-13 85.6 12.4 105 56-169 41-154 (442)
130 COG0596 MhpC Predicted hydrola 98.9 3.2E-07 7E-12 73.4 17.6 96 56-166 21-120 (282)
131 PF06028 DUF915: Alpha/beta hy 98.9 6.2E-08 1.4E-12 78.3 12.5 183 56-251 11-252 (255)
132 PRK04940 hypothetical protein; 98.8 1.6E-07 3.4E-12 71.3 12.5 97 136-253 60-179 (180)
133 COG3545 Predicted esterase of 98.8 5.9E-07 1.3E-11 67.1 14.4 90 135-231 58-162 (181)
134 TIGR03502 lipase_Pla1_cef extr 98.8 3E-08 6.5E-13 91.1 8.7 96 57-154 450-573 (792)
135 KOG3101 Esterase D [General fu 98.8 9.6E-08 2.1E-12 73.1 9.8 93 134-226 139-263 (283)
136 PF12146 Hydrolase_4: Putative 98.7 3.3E-08 7.1E-13 65.2 5.9 51 49-100 8-58 (79)
137 COG2021 MET2 Homoserine acetyl 98.7 3.4E-07 7.4E-12 76.2 12.8 110 56-166 51-179 (368)
138 PF00756 Esterase: Putative es 98.7 7.2E-08 1.6E-12 78.3 8.5 99 125-225 101-237 (251)
139 KOG3975 Uncharacterized conser 98.7 2.6E-06 5.7E-11 67.0 15.9 173 48-228 21-287 (301)
140 PF05705 DUF829: Eukaryotic pr 98.7 1.9E-06 4E-11 69.7 15.7 169 58-251 1-240 (240)
141 COG1505 Serine proteases of th 98.6 4.1E-07 8.9E-12 79.7 11.0 200 42-255 402-647 (648)
142 PF10142 PhoPQ_related: PhoPQ- 98.6 1.2E-05 2.5E-10 68.3 17.9 199 43-258 50-324 (367)
143 PF10340 DUF2424: Protein of u 98.6 5.4E-06 1.2E-10 70.1 15.8 167 43-225 104-350 (374)
144 cd00312 Esterase_lipase Estera 98.6 3.4E-07 7.4E-12 81.8 9.2 118 41-169 75-213 (493)
145 PF01674 Lipase_2: Lipase (cla 98.6 1.9E-07 4E-12 73.8 6.5 88 57-154 2-93 (219)
146 COG2936 Predicted acyl esteras 98.5 3.3E-06 7.1E-11 74.7 14.6 118 39-166 24-156 (563)
147 COG4814 Uncharacterized protei 98.5 1.1E-05 2.3E-10 63.8 14.8 183 57-253 46-286 (288)
148 PF00135 COesterase: Carboxyle 98.5 3.4E-07 7.4E-12 82.5 6.7 120 41-169 105-245 (535)
149 PF11339 DUF3141: Protein of u 98.4 4E-06 8.7E-11 72.7 11.9 56 174-229 292-354 (581)
150 PF07819 PGAP1: PGAP1-like pro 98.4 2.9E-06 6.2E-11 67.8 10.3 100 56-168 4-122 (225)
151 COG2382 Fes Enterochelin ester 98.4 2.6E-05 5.6E-10 63.5 14.8 103 134-255 175-296 (299)
152 COG0627 Predicted esterase [Ge 98.4 7.2E-06 1.6E-10 68.4 11.5 109 137-258 153-315 (316)
153 COG2272 PnbA Carboxylesterase 98.3 2.9E-06 6.2E-11 73.3 9.2 122 41-169 76-217 (491)
154 KOG2237 Predicted serine prote 98.3 3.4E-06 7.5E-11 74.5 7.9 190 54-256 468-707 (712)
155 COG3946 VirJ Type IV secretory 98.3 2.3E-05 5E-10 65.9 12.3 159 55-252 259-447 (456)
156 PF00151 Lipase: Lipase; Inte 98.2 2.1E-06 4.5E-11 72.4 5.8 128 55-191 70-216 (331)
157 KOG4840 Predicted hydrolases o 98.2 7.5E-05 1.6E-09 58.0 12.9 99 57-168 36-143 (299)
158 PF05990 DUF900: Alpha/beta hy 98.2 7E-05 1.5E-09 60.1 13.0 131 56-194 18-168 (233)
159 PLN02733 phosphatidylcholine-s 98.1 2.3E-05 4.9E-10 68.5 10.0 88 70-169 107-201 (440)
160 COG3150 Predicted esterase [Ge 98.1 0.0001 2.2E-09 54.8 11.7 108 121-252 47-187 (191)
161 COG1770 PtrB Protease II [Amin 98.1 3.5E-05 7.7E-10 68.7 11.0 167 54-225 446-657 (682)
162 PF05677 DUF818: Chlamydia CHL 98.1 6.7E-05 1.4E-09 62.2 11.1 101 77-189 163-300 (365)
163 KOG1553 Predicted alpha/beta h 98.0 1.1E-05 2.5E-10 66.4 6.2 124 57-195 244-399 (517)
164 COG2819 Predicted hydrolase of 98.0 0.0004 8.8E-09 55.9 14.5 91 134-224 135-244 (264)
165 PF03096 Ndr: Ndr family; Int 98.0 0.00083 1.8E-08 54.8 15.6 186 42-252 8-277 (283)
166 PRK10252 entF enterobactin syn 97.9 0.00028 6.1E-09 70.4 14.8 96 56-167 1068-1169(1296)
167 COG1073 Hydrolases of the alph 97.9 0.00019 4E-09 59.2 11.4 71 175-255 227-298 (299)
168 COG3319 Thioesterase domains o 97.9 0.0001 2.2E-09 59.7 9.2 98 57-170 1-104 (257)
169 PF11144 DUF2920: Protein of u 97.7 0.0044 9.6E-08 53.0 16.6 37 181-218 295-331 (403)
170 KOG2931 Differentiation-relate 97.7 0.0056 1.2E-07 49.9 15.6 118 41-168 30-156 (326)
171 PF07082 DUF1350: Protein of u 97.7 0.0013 2.9E-08 52.4 12.0 161 47-226 8-206 (250)
172 PF05577 Peptidase_S28: Serine 97.5 0.00064 1.4E-08 59.9 8.9 110 57-169 29-148 (434)
173 COG4782 Uncharacterized protei 97.5 0.0019 4.1E-08 54.1 10.7 125 57-190 116-261 (377)
174 KOG1516 Carboxylesterase and r 97.4 0.00054 1.2E-08 62.1 8.0 120 40-167 92-230 (545)
175 PF05057 DUF676: Putative seri 97.4 0.00055 1.2E-08 54.4 7.1 19 136-154 78-96 (217)
176 PF04301 DUF452: Protein of un 97.3 0.0054 1.2E-07 48.2 11.0 37 134-170 55-91 (213)
177 COG1075 LipA Predicted acetylt 97.3 0.00072 1.6E-08 57.4 6.6 97 56-168 59-163 (336)
178 PF02450 LCAT: Lecithin:choles 97.2 0.00099 2.2E-08 57.8 6.8 82 72-170 66-161 (389)
179 smart00824 PKS_TE Thioesterase 97.2 0.0038 8.2E-08 48.6 9.6 83 70-167 12-100 (212)
180 PF08386 Abhydrolase_4: TAP-li 97.2 0.0015 3.3E-08 45.3 6.4 60 179-253 34-93 (103)
181 KOG3724 Negative regulator of 97.0 0.0018 4E-08 59.2 6.7 97 57-166 90-217 (973)
182 cd00741 Lipase Lipase. Lipase 97.0 0.0044 9.5E-08 46.3 7.7 73 121-193 12-97 (153)
183 PF02089 Palm_thioest: Palmito 96.9 0.014 3E-07 47.7 10.5 102 56-168 5-115 (279)
184 KOG2541 Palmitoyl protein thio 96.9 0.01 2.2E-07 47.7 8.9 97 57-168 24-127 (296)
185 PF07519 Tannase: Tannase and 96.9 0.015 3.3E-07 51.7 11.0 67 180-254 354-427 (474)
186 TIGR03712 acc_sec_asp2 accesso 96.8 0.023 4.9E-07 49.7 11.1 159 45-223 277-485 (511)
187 KOG4388 Hormone-sensitive lipa 96.7 0.035 7.6E-07 49.5 12.0 69 180-256 788-856 (880)
188 KOG2183 Prolylcarboxypeptidase 96.7 0.006 1.3E-07 52.0 6.5 98 57-157 81-189 (492)
189 KOG2521 Uncharacterized conser 96.6 0.094 2E-06 44.4 13.5 179 54-255 36-291 (350)
190 PTZ00472 serine carboxypeptida 96.6 0.011 2.3E-07 52.6 8.0 109 55-171 76-218 (462)
191 PF06259 Abhydrolase_8: Alpha/ 96.4 0.021 4.6E-07 43.6 7.6 75 118-192 89-170 (177)
192 PF11187 DUF2974: Protein of u 96.3 0.012 2.6E-07 46.9 6.2 66 125-190 73-149 (224)
193 COG4947 Uncharacterized protei 96.3 0.032 6.8E-07 42.0 7.7 106 117-225 81-216 (227)
194 PLN02606 palmitoyl-protein thi 96.2 0.055 1.2E-06 44.8 9.7 95 57-167 27-130 (306)
195 PLN02633 palmitoyl protein thi 96.2 0.068 1.5E-06 44.3 10.2 98 56-168 25-130 (314)
196 KOG1551 Uncharacterized conser 96.0 0.023 5E-07 45.7 6.1 57 182-253 309-365 (371)
197 cd00519 Lipase_3 Lipase (class 95.9 0.038 8.3E-07 44.1 7.4 71 122-192 113-194 (229)
198 KOG2565 Predicted hydrolases o 95.9 0.056 1.2E-06 45.7 8.2 102 40-154 129-247 (469)
199 PF01764 Lipase_3: Lipase (cla 95.9 0.016 3.5E-07 42.3 4.8 33 122-154 49-82 (140)
200 PF05576 Peptidase_S37: PS-10 95.8 0.22 4.7E-06 42.9 11.6 100 58-167 64-167 (448)
201 COG4287 PqaA PhoPQ-activated p 95.8 0.017 3.8E-07 48.5 4.9 89 134-226 232-372 (507)
202 PF11288 DUF3089: Protein of u 95.8 0.012 2.7E-07 45.9 3.9 73 76-155 38-114 (207)
203 PF01083 Cutinase: Cutinase; 95.6 0.016 3.5E-07 44.5 4.0 73 121-193 65-149 (179)
204 PLN02517 phosphatidylcholine-s 95.6 0.019 4.1E-07 51.6 4.8 90 72-170 157-264 (642)
205 KOG2369 Lecithin:cholesterol a 95.6 0.019 4E-07 49.9 4.4 69 72-154 125-200 (473)
206 COG4553 DepA Poly-beta-hydroxy 95.2 1 2.2E-05 37.2 12.7 71 179-256 339-409 (415)
207 PLN02847 triacylglycerol lipas 94.9 0.11 2.4E-06 46.8 7.2 21 134-154 249-269 (633)
208 KOG3967 Uncharacterized conser 94.4 0.4 8.6E-06 37.6 8.3 85 77-168 137-226 (297)
209 PF00450 Peptidase_S10: Serine 94.3 0.15 3.2E-06 44.5 6.8 111 54-171 38-183 (415)
210 PLN02454 triacylglycerol lipas 93.7 0.26 5.5E-06 42.8 6.9 35 120-154 209-246 (414)
211 PF05277 DUF726: Protein of un 93.1 0.35 7.5E-06 41.1 6.6 60 134-193 218-289 (345)
212 COG2830 Uncharacterized protei 93.0 0.22 4.7E-06 37.1 4.5 34 136-169 57-90 (214)
213 PLN02310 triacylglycerol lipas 92.8 0.077 1.7E-06 45.8 2.4 61 136-196 209-281 (405)
214 PLN02209 serine carboxypeptida 92.8 0.68 1.5E-05 40.9 8.2 37 135-171 166-214 (437)
215 KOG2182 Hydrolytic enzymes of 92.6 0.64 1.4E-05 41.0 7.6 110 56-168 85-206 (514)
216 PLN00413 triacylglycerol lipas 92.4 0.21 4.5E-06 44.0 4.4 22 133-154 281-302 (479)
217 PLN03037 lipase class 3 family 92.2 0.39 8.5E-06 42.7 6.0 63 136-198 318-393 (525)
218 PF06850 PHB_depo_C: PHB de-po 92.0 0.4 8.7E-06 37.0 5.1 87 159-254 116-202 (202)
219 KOG4389 Acetylcholinesterase/B 91.9 0.21 4.4E-06 44.0 3.8 136 21-168 91-254 (601)
220 PLN02162 triacylglycerol lipas 91.8 0.24 5.1E-06 43.5 4.1 21 134-154 276-296 (475)
221 PLN02934 triacylglycerol lipas 91.0 0.32 7E-06 43.1 4.2 32 123-154 307-339 (515)
222 PLN02408 phospholipase A1 90.7 0.31 6.7E-06 41.7 3.7 57 136-192 200-267 (365)
223 KOG4372 Predicted alpha/beta h 90.5 0.7 1.5E-05 39.7 5.6 89 54-154 78-168 (405)
224 PLN02571 triacylglycerol lipas 90.4 0.34 7.4E-06 42.1 3.8 18 137-154 227-244 (413)
225 PF03283 PAE: Pectinacetyleste 90.1 1 2.2E-05 38.7 6.4 34 121-154 138-174 (361)
226 PLN02719 triacylglycerol lipas 89.0 0.49 1.1E-05 42.1 3.7 19 136-154 298-316 (518)
227 PLN02324 triacylglycerol lipas 89.0 0.49 1.1E-05 41.1 3.7 34 121-154 197-233 (415)
228 PLN02753 triacylglycerol lipas 88.8 0.27 5.9E-06 43.8 2.1 19 136-154 312-330 (531)
229 PLN02761 lipase class 3 family 88.1 0.33 7.2E-06 43.2 2.1 19 136-154 294-312 (527)
230 PLN03016 sinapoylglucose-malat 87.8 1.9 4E-05 38.1 6.6 36 135-170 164-211 (433)
231 PLN02802 triacylglycerol lipas 87.7 0.65 1.4E-05 41.3 3.7 19 136-154 330-348 (509)
232 KOG4540 Putative lipase essent 87.1 1.1 2.5E-05 36.7 4.4 48 121-168 260-308 (425)
233 COG5153 CVT17 Putative lipase 87.1 1.1 2.5E-05 36.7 4.4 48 121-168 260-308 (425)
234 KOG4569 Predicted lipase [Lipi 84.8 1.2 2.6E-05 37.9 3.8 34 121-154 155-189 (336)
235 PF04083 Abhydro_lipase: Parti 81.6 2.6 5.6E-05 26.2 3.4 16 55-70 42-57 (63)
236 KOG1282 Serine carboxypeptidas 80.9 7.3 0.00016 34.6 7.2 106 54-166 71-210 (454)
237 PF09994 DUF2235: Uncharacteri 80.7 11 0.00024 31.1 7.9 36 119-154 73-110 (277)
238 COG2939 Carboxypeptidase C (ca 78.3 14 0.0003 33.1 7.9 39 116-154 172-216 (498)
239 PF06309 Torsin: Torsin; Inte 78.1 4.4 9.6E-05 29.1 4.1 42 43-84 39-81 (127)
240 KOG1202 Animal-type fatty acid 77.6 8.2 0.00018 38.4 6.7 94 54-169 2121-2219(2376)
241 TIGR02690 resist_ArsH arsenica 77.6 6.2 0.00014 31.4 5.2 30 121-151 107-143 (219)
242 PF06441 EHN: Epoxide hydrolas 77.0 4.3 9.3E-05 28.5 3.7 34 38-71 71-107 (112)
243 PF08237 PE-PPE: PE-PPE domain 75.1 5 0.00011 32.1 4.1 21 134-154 46-66 (225)
244 PLN02213 sinapoylglucose-malat 75.0 5.9 0.00013 33.5 4.8 80 86-171 3-98 (319)
245 COG0431 Predicted flavoprotein 74.8 7.4 0.00016 30.0 4.9 61 71-154 56-119 (184)
246 KOG2385 Uncharacterized conser 72.9 12 0.00026 33.5 6.1 68 126-193 435-516 (633)
247 PF10605 3HBOH: 3HB-oligomer h 70.7 11 0.00025 34.4 5.6 75 179-253 555-636 (690)
248 COG4822 CbiK Cobalamin biosynt 69.4 38 0.00082 26.8 7.5 60 57-141 138-199 (265)
249 KOG2029 Uncharacterized conser 68.2 5.3 0.00011 36.4 3.0 33 122-154 509-544 (697)
250 PLN02213 sinapoylglucose-malat 64.5 24 0.00052 29.8 6.3 64 179-253 233-316 (319)
251 COG3673 Uncharacterized conser 64.3 72 0.0016 27.1 8.6 35 120-154 104-140 (423)
252 PLN03016 sinapoylglucose-malat 59.9 33 0.00071 30.4 6.5 64 179-253 347-430 (433)
253 PLN02209 serine carboxypeptida 57.5 38 0.00083 30.1 6.5 64 179-253 351-434 (437)
254 KOG1283 Serine carboxypeptidas 56.9 56 0.0012 27.7 6.8 121 47-173 20-170 (414)
255 TIGR02884 spore_pdaA delta-lac 56.6 20 0.00043 28.5 4.2 35 57-91 187-221 (224)
256 COG0529 CysC Adenylylsulfate k 55.6 36 0.00079 26.2 5.1 38 55-92 21-59 (197)
257 PTZ00472 serine carboxypeptida 52.5 41 0.00089 30.1 5.9 28 179-206 364-391 (462)
258 KOG2170 ATPase of the AAA+ sup 50.3 21 0.00045 30.0 3.4 44 43-86 96-140 (344)
259 PF00698 Acyl_transf_1: Acyl t 49.3 18 0.00038 30.5 3.0 30 125-154 73-102 (318)
260 KOG1202 Animal-type fatty acid 49.0 1.3E+02 0.0028 30.8 8.6 97 125-227 571-693 (2376)
261 KOG4530 Predicted flavoprotein 48.5 45 0.00098 25.0 4.5 38 73-133 77-115 (199)
262 smart00827 PKS_AT Acyl transfe 47.9 26 0.00056 28.9 3.8 29 126-154 72-100 (298)
263 KOG1209 1-Acyl dihydroxyaceton 47.0 39 0.00084 26.9 4.2 34 57-92 7-40 (289)
264 TIGR03131 malonate_mdcH malona 47.0 28 0.00061 28.8 3.8 29 126-154 66-94 (295)
265 PF13207 AAA_17: AAA domain; P 46.4 35 0.00077 23.6 3.8 31 59-92 1-32 (121)
266 PRK02399 hypothetical protein; 45.9 1.9E+02 0.004 25.5 8.6 96 60-155 6-116 (406)
267 cd03413 CbiK_C Anaerobic cobal 45.5 98 0.0021 21.2 7.0 26 59-84 3-29 (103)
268 PF12242 Eno-Rase_NADH_b: NAD( 43.7 47 0.001 21.6 3.5 34 121-154 21-58 (78)
269 PRK14729 miaA tRNA delta(2)-is 43.5 75 0.0016 26.7 5.8 83 58-143 5-101 (300)
270 KOG1282 Serine carboxypeptidas 43.3 56 0.0012 29.2 5.2 64 180-253 364-447 (454)
271 TIGR02764 spore_ybaN_pdaB poly 43.2 31 0.00068 26.4 3.4 34 58-91 153-188 (191)
272 PHA02519 plasmid partition pro 42.1 51 0.0011 28.8 4.8 36 56-92 105-143 (387)
273 COG1255 Uncharacterized protei 42.1 28 0.00061 24.6 2.5 21 72-92 24-44 (129)
274 cd03409 Chelatase_Class_II Cla 41.7 1E+02 0.0022 20.4 6.8 20 122-141 46-65 (101)
275 COG4874 Uncharacterized protei 40.7 1.2E+02 0.0027 24.5 6.1 58 72-132 58-126 (318)
276 PF06500 DUF1100: Alpha/beta h 40.3 26 0.00057 30.7 2.7 67 178-254 188-255 (411)
277 PF01656 CbiA: CobQ/CobB/MinD/ 39.7 46 0.001 25.2 3.9 22 71-92 14-35 (195)
278 PF01583 APS_kinase: Adenylyls 39.0 88 0.0019 23.4 5.0 36 57-92 2-38 (156)
279 TIGR00128 fabD malonyl CoA-acy 38.1 44 0.00096 27.4 3.7 28 127-154 73-101 (290)
280 PF15240 Pro-rich: Proline-ric 37.4 18 0.00039 27.6 1.1 18 2-19 1-18 (179)
281 COG3887 Predicted signaling pr 37.2 2.4E+02 0.0053 26.2 8.1 46 121-167 324-376 (655)
282 PF00450 Peptidase_S10: Serine 36.9 40 0.00087 29.2 3.4 64 179-252 330-414 (415)
283 COG0324 MiaA tRNA delta(2)-iso 35.6 1.3E+02 0.0028 25.4 5.9 83 57-142 3-100 (308)
284 PLN02748 tRNA dimethylallyltra 35.2 99 0.0022 27.8 5.5 85 56-143 21-120 (468)
285 PRK13869 plasmid-partitioning 35.2 78 0.0017 27.8 4.9 34 58-92 122-158 (405)
286 cd05312 NAD_bind_1_malic_enz N 34.8 1.1E+02 0.0023 25.5 5.3 88 59-153 27-123 (279)
287 cd01983 Fer4_NifH The Fer4_Nif 34.3 78 0.0017 20.3 3.9 31 61-91 3-34 (99)
288 PRK14581 hmsF outer membrane N 33.7 1.2E+02 0.0026 28.6 6.0 36 57-92 49-93 (672)
289 PF08643 DUF1776: Fungal famil 33.0 83 0.0018 26.4 4.4 33 58-92 4-36 (299)
290 PRK00091 miaA tRNA delta(2)-is 31.8 1.6E+02 0.0035 24.8 6.1 34 57-93 4-38 (307)
291 PLN02572 UDP-sulfoquinovose sy 31.8 1.2E+02 0.0026 27.0 5.5 31 59-92 49-79 (442)
292 PF06180 CbiK: Cobalt chelatas 31.8 1.6E+02 0.0034 24.2 5.8 62 55-141 140-203 (262)
293 PRK14582 pgaB outer membrane N 31.7 91 0.002 29.4 4.9 37 56-92 48-93 (671)
294 PF08250 Sperm_act_pep: Sperm- 31.4 12 0.00025 14.1 -0.4 6 142-147 1-6 (10)
295 PLN02840 tRNA dimethylallyltra 31.4 1.2E+02 0.0027 26.8 5.4 84 57-143 21-119 (421)
296 KOG3079 Uridylate kinase/adeny 31.3 84 0.0018 24.4 3.8 33 55-90 6-39 (195)
297 COG0400 Predicted esterase [Ge 31.2 2E+02 0.0044 22.6 6.1 44 55-98 145-190 (207)
298 cd07198 Patatin Patatin-like p 31.2 80 0.0017 23.7 3.9 30 126-155 16-45 (172)
299 COG2312 Erythromycin esterase 30.8 98 0.0021 27.1 4.5 91 58-154 46-159 (405)
300 COG2185 Sbm Methylmalonyl-CoA 30.6 2.2E+02 0.0048 21.0 10.0 93 55-174 11-107 (143)
301 PRK13705 plasmid-partitioning 30.4 90 0.002 27.2 4.5 37 56-92 105-143 (388)
302 cd07207 Pat_ExoU_VipD_like Exo 30.2 82 0.0018 24.0 3.9 31 125-155 16-46 (194)
303 cd04950 GT1_like_1 Glycosyltra 30.0 91 0.002 26.7 4.5 37 57-93 5-42 (373)
304 COG3233 Predicted deacetylase 29.7 2.9E+02 0.0064 22.1 7.5 69 57-147 4-79 (233)
305 cd03818 GT1_ExpC_like This fam 29.7 81 0.0018 27.2 4.1 31 59-92 2-32 (396)
306 PF03033 Glyco_transf_28: Glyc 29.4 53 0.0012 23.3 2.5 33 60-92 2-34 (139)
307 COG3911 Predicted ATPase [Gene 29.3 1E+02 0.0022 23.2 3.8 31 58-91 10-40 (183)
308 PRK06703 flavodoxin; Provision 28.9 1.8E+02 0.0039 21.1 5.4 35 58-92 4-38 (151)
309 PF02606 LpxK: Tetraacyldisacc 28.8 1.6E+02 0.0035 25.1 5.6 35 57-92 35-73 (326)
310 cd02037 MRP-like MRP (Multiple 28.6 92 0.002 23.2 3.8 22 71-92 15-36 (169)
311 COG1647 Esterase/lipase [Gener 28.4 93 0.002 25.0 3.7 63 179-252 15-77 (243)
312 cd02032 Bchl_like This family 28.3 91 0.002 25.3 4.0 22 71-92 15-36 (267)
313 TIGR00174 miaA tRNA isopenteny 28.1 1.5E+02 0.0032 24.7 5.2 32 59-93 1-33 (287)
314 PF09989 DUF2229: CoA enzyme a 28.0 69 0.0015 25.5 3.1 37 56-92 183-220 (221)
315 TIGR01969 minD_arch cell divis 27.9 1.1E+02 0.0023 24.4 4.3 22 71-92 16-37 (251)
316 cd02036 MinD Bacterial cell di 27.7 95 0.0021 23.0 3.8 22 71-92 15-36 (179)
317 COG0362 Gnd 6-phosphogluconate 27.7 1.5E+02 0.0032 26.1 5.1 161 74-256 16-209 (473)
318 cd01477 vWA_F09G8-8_type VWA F 27.6 1.7E+02 0.0036 22.7 5.2 37 56-92 132-169 (193)
319 TIGR03453 partition_RepA plasm 27.4 1.3E+02 0.0027 26.2 4.9 35 58-92 105-141 (387)
320 PF09370 TIM-br_sig_trns: TIM- 27.4 74 0.0016 26.1 3.1 94 125-223 2-120 (268)
321 PHA02518 ParA-like protein; Pr 27.1 1.2E+02 0.0026 23.2 4.4 22 71-92 16-37 (211)
322 PRK10279 hypothetical protein; 27.1 95 0.0021 26.0 3.9 30 126-155 23-52 (300)
323 KOG0780 Signal recognition par 27.1 1.2E+02 0.0026 26.7 4.4 40 51-90 95-135 (483)
324 KOG1201 Hydroxysteroid 17-beta 27.0 99 0.0021 25.9 3.8 33 57-92 38-70 (300)
325 COG2845 Uncharacterized protei 26.7 1.8E+02 0.0038 24.8 5.2 27 128-154 109-135 (354)
326 PRK13230 nitrogenase reductase 26.7 1E+02 0.0023 25.2 4.1 22 71-92 16-37 (279)
327 cd02022 DPCK Dephospho-coenzym 26.5 91 0.002 23.6 3.5 32 59-93 1-32 (179)
328 COG3494 Uncharacterized protei 26.5 2.1E+02 0.0046 23.4 5.4 58 74-142 18-76 (279)
329 KOG2853 Possible oxidoreductas 26.3 2.1E+02 0.0045 24.9 5.6 33 59-92 89-121 (509)
330 PF14253 AbiH: Bacteriophage a 26.3 38 0.00081 27.6 1.4 16 134-149 233-248 (270)
331 PLN02757 sirohydrochlorine fer 26.0 2.8E+02 0.0061 20.6 7.1 62 57-141 14-78 (154)
332 TIGR01007 eps_fam capsular exo 25.9 1.3E+02 0.0029 23.1 4.4 34 59-92 19-54 (204)
333 TIGR03371 cellulose_yhjQ cellu 25.9 1.1E+02 0.0023 24.4 3.9 22 71-92 17-38 (246)
334 TIGR03566 FMN_reduc_MsuE FMN r 25.7 1.3E+02 0.0029 22.6 4.2 51 71-144 57-110 (174)
335 TIGR02069 cyanophycinase cyano 25.6 1.6E+02 0.0035 23.9 4.9 38 55-92 27-65 (250)
336 TIGR03569 NeuB_NnaB N-acetylne 25.6 4.3E+02 0.0092 22.6 7.8 79 55-154 132-213 (329)
337 cd03146 GAT1_Peptidase_E Type 25.5 1.1E+02 0.0023 24.1 3.8 38 55-92 30-68 (212)
338 PRK08177 short chain dehydroge 25.4 1.1E+02 0.0024 23.8 3.9 31 59-92 3-33 (225)
339 cd07205 Pat_PNPLA6_PNPLA7_NTE1 25.2 1.3E+02 0.0028 22.6 4.1 31 125-155 17-47 (175)
340 PF01121 CoaE: Dephospho-CoA k 25.2 1.1E+02 0.0024 23.4 3.7 32 59-93 2-33 (180)
341 cd03416 CbiX_SirB_N Sirohydroc 24.7 2.2E+02 0.0048 19.0 6.0 25 59-83 2-28 (101)
342 PRK10673 acyl-CoA esterase; Pr 24.7 3.4E+02 0.0074 21.2 7.5 62 179-253 16-77 (255)
343 cd07210 Pat_hypo_W_succinogene 24.6 1.3E+02 0.0028 23.9 4.1 30 126-155 18-47 (221)
344 PF13477 Glyco_trans_4_2: Glyc 24.6 2.5E+02 0.0054 19.6 8.3 23 71-93 11-33 (139)
345 PF03949 Malic_M: Malic enzyme 24.6 75 0.0016 26.0 2.7 89 60-154 28-125 (255)
346 PF08484 Methyltransf_14: C-me 24.5 1.2E+02 0.0025 22.8 3.6 44 120-164 54-99 (160)
347 PHA01735 hypothetical protein 24.5 57 0.0012 20.6 1.5 24 117-140 29-52 (76)
348 TIGR01281 DPOR_bchL light-inde 24.1 1.2E+02 0.0027 24.5 4.1 22 71-92 15-36 (268)
349 TIGR00682 lpxK tetraacyldisacc 24.1 2.4E+02 0.0051 23.9 5.7 35 57-92 28-66 (311)
350 PRK07523 gluconate 5-dehydroge 24.1 1.1E+02 0.0024 24.3 3.8 31 59-92 12-42 (255)
351 cd02040 NifH NifH gene encodes 24.0 1.4E+02 0.003 24.1 4.3 22 71-92 16-37 (270)
352 PF01935 DUF87: Domain of unkn 23.9 1.5E+02 0.0032 23.3 4.4 52 42-96 9-63 (229)
353 cd02067 B12-binding B12 bindin 23.8 2.5E+02 0.0055 19.3 7.7 19 73-91 16-34 (119)
354 TIGR01287 nifH nitrogenase iro 23.7 1.3E+02 0.0028 24.5 4.1 22 71-92 15-36 (275)
355 PLN02653 GDP-mannose 4,6-dehyd 23.6 1.7E+02 0.0036 24.6 4.9 31 59-92 8-38 (340)
356 cd07225 Pat_PNPLA6_PNPLA7 Pata 23.3 1.2E+02 0.0027 25.4 3.9 31 125-155 32-62 (306)
357 KOG3349 Predicted glycosyltran 23.1 1.2E+02 0.0025 22.8 3.2 17 74-90 117-133 (170)
358 cd02042 ParA ParA and ParB of 23.0 1.4E+02 0.0031 19.8 3.7 22 71-92 15-36 (104)
359 PRK06194 hypothetical protein; 22.9 1.1E+02 0.0025 24.8 3.7 31 59-92 8-38 (287)
360 COG0331 FabD (acyl-carrier-pro 22.9 1E+02 0.0023 26.0 3.4 29 127-155 74-104 (310)
361 TIGR03586 PseI pseudaminic aci 22.9 4.8E+02 0.01 22.2 8.4 78 55-153 133-211 (327)
362 COG0552 FtsY Signal recognitio 22.7 2.1E+02 0.0045 24.5 5.0 38 54-91 136-174 (340)
363 cd07228 Pat_NTE_like_bacteria 22.6 1.6E+02 0.0034 22.2 4.1 30 126-155 18-47 (175)
364 KOG1014 17 beta-hydroxysteroid 22.5 98 0.0021 26.0 3.1 31 58-91 50-80 (312)
365 PTZ00445 p36-lilke protein; Pr 22.5 4E+02 0.0087 21.2 8.5 97 72-176 30-151 (219)
366 cd07209 Pat_hypo_Ecoli_Z1214_l 22.5 1.4E+02 0.003 23.5 3.9 31 126-156 16-46 (215)
367 CHL00175 minD septum-site dete 22.5 1.5E+02 0.0033 24.2 4.3 34 59-92 17-52 (281)
368 TIGR01303 IMP_DH_rel_1 IMP deh 22.4 3.4E+02 0.0074 24.5 6.7 60 72-154 225-284 (475)
369 PRK12828 short chain dehydroge 22.3 1.4E+02 0.0031 23.1 4.0 31 59-92 9-39 (239)
370 PRK08339 short chain dehydroge 22.3 1.3E+02 0.0029 24.1 3.9 31 59-92 10-40 (263)
371 cd03129 GAT1_Peptidase_E_like 22.3 3.8E+02 0.0082 20.8 6.8 37 56-92 29-65 (210)
372 TIGR01968 minD_bact septum sit 22.2 1.5E+02 0.0034 23.6 4.3 23 71-93 17-39 (261)
373 COG1506 DAP2 Dipeptidyl aminop 22.2 2.7E+02 0.0059 26.0 6.3 62 56-132 551-615 (620)
374 COG0237 CoaE Dephospho-CoA kin 22.0 1.7E+02 0.0037 22.9 4.2 32 58-92 3-34 (201)
375 CHL00072 chlL photochlorophyll 22.0 87 0.0019 26.0 2.8 22 71-92 15-36 (290)
376 TIGR02873 spore_ylxY probable 22.0 1.3E+02 0.0027 24.8 3.6 34 57-91 231-264 (268)
377 COG1752 RssA Predicted esteras 21.9 1.3E+02 0.0028 25.2 3.8 30 126-155 29-58 (306)
378 PRK13235 nifH nitrogenase redu 21.9 73 0.0016 26.0 2.3 22 71-92 16-37 (274)
379 PRK07326 short chain dehydroge 21.8 1.5E+02 0.0032 23.1 4.0 31 59-92 8-38 (237)
380 PRK09072 short chain dehydroge 21.8 1.3E+02 0.0029 24.0 3.8 31 59-92 7-37 (263)
381 PRK06924 short chain dehydroge 21.7 1.3E+02 0.0028 23.8 3.7 30 60-92 4-33 (251)
382 COG1087 GalE UDP-glucose 4-epi 21.5 1.7E+02 0.0036 24.8 4.2 34 60-96 3-37 (329)
383 PF10081 Abhydrolase_9: Alpha/ 21.5 4.9E+02 0.011 21.8 8.6 34 135-168 108-146 (289)
384 PRK07067 sorbitol dehydrogenas 21.4 1.4E+02 0.003 23.7 3.9 31 59-92 8-38 (257)
385 cd02033 BchX Chlorophyllide re 21.4 2.1E+02 0.0046 24.4 5.0 35 58-92 32-67 (329)
386 KOG3179 Predicted glutamine sy 21.3 4.2E+02 0.009 21.0 6.0 99 127-231 83-192 (245)
387 PRK00131 aroK shikimate kinase 21.2 1.5E+02 0.0032 21.8 3.8 33 57-92 4-37 (175)
388 PF04084 ORC2: Origin recognit 21.1 3.8E+02 0.0082 22.8 6.4 104 60-166 57-176 (326)
389 PRK08643 acetoin reductase; Va 21.1 1.5E+02 0.0033 23.5 4.0 31 59-92 4-34 (256)
390 PRK13185 chlL protochlorophyll 21.1 1.7E+02 0.0036 23.8 4.2 22 71-92 17-38 (270)
391 PRK10037 cell division protein 21.1 84 0.0018 25.3 2.4 22 71-92 17-38 (250)
392 PRK07890 short chain dehydroge 21.0 1.6E+02 0.0034 23.4 4.1 31 59-92 7-37 (258)
393 PRK03094 hypothetical protein; 20.9 1.1E+02 0.0024 20.1 2.4 21 72-92 9-29 (80)
394 PRK00081 coaE dephospho-CoA ki 20.8 2E+02 0.0043 22.1 4.4 32 59-93 4-35 (194)
395 PRK13236 nitrogenase reductase 20.8 1.6E+02 0.0035 24.5 4.1 34 59-92 8-42 (296)
396 cd04951 GT1_WbdM_like This fam 20.6 3.9E+02 0.0084 22.0 6.6 26 67-92 12-37 (360)
397 TIGR03029 EpsG chain length de 20.6 2.3E+02 0.0049 23.1 5.0 36 57-92 104-140 (274)
398 PRK08703 short chain dehydroge 20.5 1.7E+02 0.0036 23.0 4.1 31 59-92 8-38 (239)
399 TIGR01359 UMP_CMP_kin_fam UMP- 20.4 1.4E+02 0.0031 22.3 3.5 30 59-91 1-31 (183)
400 PRK08265 short chain dehydroge 20.4 1.5E+02 0.0033 23.7 3.8 31 59-92 8-38 (261)
401 PRK06101 short chain dehydroge 20.3 1.3E+02 0.0029 23.6 3.5 31 59-92 3-33 (240)
402 COG3640 CooC CO dehydrogenase 20.3 2.3E+02 0.0049 23.1 4.5 33 60-92 3-37 (255)
403 PRK12823 benD 1,6-dihydroxycyc 20.2 1.6E+02 0.0035 23.4 4.0 31 59-92 10-40 (260)
404 PRK05876 short chain dehydroge 20.2 1.6E+02 0.0034 24.0 3.9 31 59-92 8-38 (275)
405 KOG0781 Signal recognition par 20.2 3.3E+02 0.0072 24.7 5.9 73 61-153 442-515 (587)
406 PF03698 UPF0180: Uncharacteri 20.2 1.1E+02 0.0024 20.1 2.3 21 72-92 9-29 (80)
407 TIGR02016 BchX chlorophyllide 20.1 1.7E+02 0.0037 24.4 4.1 22 71-92 15-36 (296)
408 PRK05717 oxidoreductase; Valid 20.0 1.5E+02 0.0033 23.5 3.8 31 59-92 12-42 (255)
409 PRK01906 tetraacyldisaccharide 20.0 2.5E+02 0.0055 24.0 5.2 35 57-92 56-94 (338)
No 1
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=100.00 E-value=6e-36 Score=227.31 Aligned_cols=236 Identities=38% Similarity=0.654 Sum_probs=216.1
Q ss_pred cCCccCCCCCCCCCCCCceEeeeCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCC
Q 025027 20 QAPCYREPPPFCPTCGAGTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAAN 99 (259)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~ 99 (259)
.+.|+...+...+....|+.++++|+++|+.+...++.+||++...+|...+..+..|+.++..||.|++||++.|.+++
T Consensus 3 ~~~cc~~~~~~~~~~~~g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~ 82 (242)
T KOG3043|consen 3 PMPCCPDGKIAAEVDDGGREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWS 82 (242)
T ss_pred CCCCCCCcccccccCCCCceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCC
Confidence 45788888888888888999999999999998877778999999999998887899999999999999999999999988
Q ss_pred CCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC-CCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCChhhhhc
Q 025027 100 PSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG-VSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVTEDEIKA 177 (259)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~~~~~~~ 177 (259)
++.....+..|++.++.+....++..+++||++++ ..+|+++|+||||..+..+. ..+.+.++++++|.+....+...
T Consensus 83 ~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D~~~ 162 (242)
T KOG3043|consen 83 PSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADIAN 162 (242)
T ss_pred CCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhHHhc
Confidence 88788888999999999999999999999999885 78999999999999999977 55699999999999999999999
Q ss_pred cCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccc-cCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 178 VKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTV-RYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 178 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
+++|++++.++.|.++|++...++.+.++..+....++.+|+|.+|+|.. +.+...|++..+.+++++.+++||++++
T Consensus 163 vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 163 VKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999997666556789999999999987 7788889999999999999999999876
No 2
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.97 E-value=3.5e-31 Score=211.17 Aligned_cols=206 Identities=31% Similarity=0.572 Sum_probs=151.4
Q ss_pred eeeEEeCCCCC--CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhh---hhccCCCcc
Q 025027 45 LKAYVTGPPHS--KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTW---RKNHTTDKG 119 (259)
Q Consensus 45 ~~~~~~~~~~~--~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~---~~~~~~~~~ 119 (259)
+++|+..|+.. .|.||++|+.+|.+ +..+.++++|+++||.|++||+++|.+..+.........+ .... .+..
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 78 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR-PEQV 78 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS-HHHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh-HHHH
Confidence 46888888764 68899999999998 6789999999999999999999866662222222221111 1111 2455
Q ss_pred cccHHHHHHHHHHcC---CCcEEEEeechhHHHHHHHhcC-cccceEEEecCC-CC--ChhhhhccCCcEEEeecCCCCC
Q 025027 120 YEDAKPVIAALKAKG---VSAVGAAGFCWGGKVAVKLASN-QDVQAAVLLHPS-NV--TEDEIKAVKVPIAVLGAERDNG 192 (259)
Q Consensus 120 ~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~-~~i~~~i~~~~~-~~--~~~~~~~~~~Pvl~i~g~~D~~ 192 (259)
..++.+++++|+++. ..||+++|||+||.+++.++.. +.+++++.++|. .. ......++++|+++++|++|+.
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~ 158 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGENDPF 158 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEETT-TT
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcchhhhcccCCCEeecCccCCCC
Confidence 678889999998764 5699999999999999999855 489999999992 22 2345788999999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 193 LPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
++.+....+.+.+ .+.+.++++++|+|++|+|..+... ..+..+++++|+.+++||+++|
T Consensus 159 ~~~~~~~~~~~~l-~~~~~~~~~~~y~ga~HgF~~~~~~--~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 159 FPPEEVEALEEAL-KAAGVDVEVHVYPGAGHGFANPSRP--PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp S-HHHHHHHHHHH-HCTTTTEEEEEETT--TTTTSTTST--T--HHHHHHHHHHHHHHHCC--
T ss_pred CChHHHHHHHHHH-HhcCCcEEEEECCCCcccccCCCCc--ccCHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999 4457799999999999999887666 5556899999999999999875
No 3
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=2.3e-27 Score=189.96 Aligned_cols=212 Identities=24% Similarity=0.431 Sum_probs=167.5
Q ss_pred CCeeeEEeCCCCCC--eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCC--Ccchhh-hhhccCCC
Q 025027 43 GGLKAYVTGPPHSK--KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNP--KYDKDT-WRKNHTTD 117 (259)
Q Consensus 43 ~~~~~~~~~~~~~~--~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~--~~~~~~-~~~~~~~~ 117 (259)
+.++.|+..|.+.. |.||++|+.+|.+ +.++.++++||++||.|++||++...+...... ...... ........
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPA 90 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHH
Confidence 45889998887543 6899999999998 478999999999999999999975433322222 111111 11122336
Q ss_pred cccccHHHHHHHHHHcC---CCcEEEEeechhHHHHHHHhcCc-ccceEEEecCCCCC--hhhhhccCCcEEEeecCCCC
Q 025027 118 KGYEDAKPVIAALKAKG---VSAVGAAGFCWGGKVAVKLASNQ-DVQAAVLLHPSNVT--EDEIKAVKVPIAVLGAERDN 191 (259)
Q Consensus 118 ~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~i~~~~~~~~--~~~~~~~~~Pvl~i~g~~D~ 191 (259)
+...|+.+++++|.++. ..+|+++||||||.+++.++... ++++.++++|.... .....++++|+|+.+|+.|.
T Consensus 91 ~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~~~~~~~pvl~~~~~~D~ 170 (236)
T COG0412 91 EVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPVLLHLAGEDP 170 (236)
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccccccccCcEEEEecccCC
Confidence 77899999999999764 67899999999999999999665 89999999998874 34556899999999999999
Q ss_pred CCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccC-CCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 192 GLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRY-FVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
.+|.+....+.+.+ ...+..+++.+|+++.|+|.++. +.....+..+++++|+++++||++.+.
T Consensus 171 ~~p~~~~~~~~~~~-~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 171 YIPAADVDALAAAL-EDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCChhHHHHHHHHH-HhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999 44445788999999999998763 111233457899999999999999875
No 4
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=4.2e-23 Score=168.68 Aligned_cols=171 Identities=14% Similarity=0.252 Sum_probs=129.0
Q ss_pred eeeEEeCCCC---CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccc
Q 025027 45 LKAYVTGPPH---SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 121 (259)
Q Consensus 45 ~~~~~~~~~~---~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (259)
+.+++..|++ .+.++|++.||++.+...+..+|+.|+++||.|+.+|++++.|.+.+... ..+......
T Consensus 22 L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--------~~t~s~g~~ 93 (307)
T PRK13604 22 IRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--------EFTMSIGKN 93 (307)
T ss_pred EEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--------cCcccccHH
Confidence 8888888852 22234444555555556699999999999999999998643243322211 112233468
Q ss_pred cHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC------------------------------
Q 025027 122 DAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT------------------------------ 171 (259)
Q Consensus 122 d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~------------------------------ 171 (259)
|+.++++|+++++.++|+|+||||||.+++.+|...+++++|+.+|+...
T Consensus 94 Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~ 173 (307)
T PRK13604 94 SLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHN 173 (307)
T ss_pred HHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCccccccccccccccc
Confidence 99999999998777899999999999999888877679999998876430
Q ss_pred ---------------h------hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 ---------------E------DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 ---------------~------~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
. +..++++.|+|++||++|.+||.+.+..+++.++. .+++++.++|++|.|.
T Consensus 174 l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s---~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 174 LGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS---EQCKLYSLIGSSHDLG 246 (307)
T ss_pred ccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc---CCcEEEEeCCCccccC
Confidence 0 11345678999999999999999999999998732 2678999999999984
No 5
>PHA02857 monoglyceride lipase; Provisional
Probab=99.91 E-value=2.4e-22 Score=165.80 Aligned_cols=197 Identities=19% Similarity=0.232 Sum_probs=138.3
Q ss_pred eeeCCeeeEE--eCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCC
Q 025027 40 TELGGLKAYV--TGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTD 117 (259)
Q Consensus 40 ~~~~~~~~~~--~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 117 (259)
..-+|.++++ ..|....+++|++.||++.+...|..+++.|+++||.|+++|++ |+|.+.... ... ....
T Consensus 6 ~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~-G~G~S~~~~-~~~------~~~~ 77 (276)
T PHA02857 6 FNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHI-GHGRSNGEK-MMI------DDFG 77 (276)
T ss_pred ecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCC-CCCCCCCcc-CCc------CCHH
Confidence 3446644444 45643334555554445655678999999999999999999995 665443211 110 1122
Q ss_pred cccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-----------------------
Q 025027 118 KGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT----------------------- 171 (259)
Q Consensus 118 ~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~----------------------- 171 (259)
...+|+...++.+++. +..+++|+|||+||.+++.++ ..| .++++|+.+|....
T Consensus 78 ~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
T PHA02857 78 VYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIV 157 (276)
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCcc
Confidence 3345666666666543 345899999999999999988 444 58999998774210
Q ss_pred --------------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhc
Q 025027 172 --------------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSA 207 (259)
Q Consensus 172 --------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~ 207 (259)
.+.+.++++|+|+++|++|.++|++.+..+.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~ 237 (276)
T PHA02857 158 GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC 237 (276)
T ss_pred CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC
Confidence 012346789999999999999999999999887722
Q ss_pred CCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 208 KPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 208 ~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
++++.++++++|....+.. +..+++++++.+||+++.
T Consensus 238 ----~~~~~~~~~~gH~~~~e~~-------~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 238 ----NREIKIYEGAKHHLHKETD-------EVKKSVMKEIETWIFNRV 274 (276)
T ss_pred ----CceEEEeCCCcccccCCch-------hHHHHHHHHHHHHHHHhc
Confidence 4688999999998865432 246899999999999863
No 6
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.90 E-value=4.9e-23 Score=156.84 Aligned_cols=175 Identities=22% Similarity=0.324 Sum_probs=145.1
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV 135 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (259)
+.+|+++||..|.+. .++.++++|+++||.|.+|.+ .|++..++. +-..+.++..+++.+.++.|.+.+.
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~y-pGHG~~~e~--------fl~t~~~DW~~~v~d~Y~~L~~~gy 84 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRY-PGHGTLPED--------FLKTTPRDWWEDVEDGYRDLKEAGY 84 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCC-CCCCCCHHH--------HhcCCHHHHHHHHHHHHHHHHHcCC
Confidence 378999999999874 789999999999999999999 577765432 2223445666899999999998888
Q ss_pred CcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC--------------------------------------------
Q 025027 136 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-------------------------------------------- 171 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~-------------------------------------------- 171 (259)
+.|.++|.||||.+++.+|.+-.+++++.+++....
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~ 164 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTA 164 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHH
Confidence 999999999999999999977668889888765321
Q ss_pred ---------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHH
Q 025027 172 ---------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAE 242 (259)
Q Consensus 172 ---------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~ 242 (259)
...+..|..|++++.|.+|+++|.+.+..+++.+.+ .+.++.+|++.||-++.+ +..++
T Consensus 165 ~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s---~~KeL~~~e~SgHVIt~D---------~Erd~ 232 (243)
T COG1647 165 QLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES---DDKELKWLEGSGHVITLD---------KERDQ 232 (243)
T ss_pred HHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC---CcceeEEEccCCceeecc---------hhHHH
Confidence 124566788999999999999999999999999843 277999999999988764 34599
Q ss_pred HHHHHHHHHH
Q 025027 243 AHEDMINWFE 252 (259)
Q Consensus 243 ~~~~~~~fl~ 252 (259)
+.+.++.||+
T Consensus 233 v~e~V~~FL~ 242 (243)
T COG1647 233 VEEDVITFLE 242 (243)
T ss_pred HHHHHHHHhh
Confidence 9999999997
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=8.7e-22 Score=166.58 Aligned_cols=204 Identities=21% Similarity=0.269 Sum_probs=143.0
Q ss_pred CceEeeeCCeeeEEe--CCCC---CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhh
Q 025027 36 AGTVTELGGLKAYVT--GPPH---SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTW 110 (259)
Q Consensus 36 ~g~~~~~~~~~~~~~--~~~~---~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~ 110 (259)
.+.++..+|.++++. .|.+ +++.||++||..+...-.+..+++.|+++||.|+++|++ |+|.+......
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~r-GhG~S~~~~~~----- 107 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLE-GHGRSEGLRAY----- 107 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCC-CCCCCCCcccc-----
Confidence 345666688777663 3332 234567777764333224677888999999999999995 55544321110
Q ss_pred hhccCCCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC--------------
Q 025027 111 RKNHTTDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-------------- 171 (259)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~-------------- 171 (259)
..+.+...+|+.++++++... +..+++|+||||||.+++.++ .+| +++++|+.+|....
T Consensus 108 --~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T PLN02298 108 --VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQIL 185 (330)
T ss_pred --CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHH
Confidence 112345668999999999754 235799999999999999977 445 69999987763100
Q ss_pred ----------------------------------------------------------hhhhhccCCcEEEeecCCCCCC
Q 025027 172 ----------------------------------------------------------EDEIKAVKVPIAVLGAERDNGL 193 (259)
Q Consensus 172 ----------------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~ 193 (259)
...+.++++|+|+++|++|.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~iv 265 (330)
T PLN02298 186 TFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVT 265 (330)
T ss_pred HHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCC
Confidence 0012356889999999999999
Q ss_pred ChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 194 PPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
|++..+.+++.++. ...++++++|++|....+... ...+.+.+.+.+||++++.
T Consensus 266 p~~~~~~l~~~i~~---~~~~l~~~~~a~H~~~~e~pd------~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 266 DPDVSRALYEEAKS---EDKTIKIYDGMMHSLLFGEPD------ENIEIVRRDILSWLNERCT 319 (330)
T ss_pred CHHHHHHHHHHhcc---CCceEEEcCCcEeeeecCCCH------HHHHHHHHHHHHHHHHhcc
Confidence 99999999888732 246889999999987543222 2347789999999999875
No 8
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=6.4e-22 Score=157.93 Aligned_cols=199 Identities=24% Similarity=0.322 Sum_probs=144.8
Q ss_pred eEeeeCCeeeEEe--CCCC--CCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhh
Q 025027 38 TVTELGGLKAYVT--GPPH--SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRK 112 (259)
Q Consensus 38 ~~~~~~~~~~~~~--~~~~--~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 112 (259)
.++.-.|.+++.. .|.. ..+++|++-||+|.. ...|..++.+|++.||.|+++|+. |+|.+.+. ...+
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~-GhG~SdGl-~~yi----- 103 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYE-GHGRSDGL-HAYV----- 103 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeecc-CCCcCCCC-cccC-----
Confidence 3445566666664 3422 334566666666654 357788999999999999999994 66544321 1111
Q ss_pred ccCCCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHhc-Cc-ccceEEEecCCCCC----------------
Q 025027 113 NHTTDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT---------------- 171 (259)
Q Consensus 113 ~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~i~~~~~~~~---------------- 171 (259)
.+++..++|+.+.++.++.+ ...+..|+||||||++++.++. +| ...++|+.+|...-
T Consensus 104 -~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~ 182 (313)
T KOG1455|consen 104 -PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTL 182 (313)
T ss_pred -CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHH
Confidence 12456667888888877654 3458999999999999999984 55 56777776654210
Q ss_pred --------------------------------------------------------hhhhhccCCcEEEeecCCCCCCCh
Q 025027 172 --------------------------------------------------------EDEIKAVKVPIAVLGAERDNGLPP 195 (259)
Q Consensus 172 --------------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~ 195 (259)
.+++.++++|++++||+.|.+..+
T Consensus 183 l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp 262 (313)
T KOG1455|consen 183 LSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDP 262 (313)
T ss_pred HHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCc
Confidence 345778899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCceEEecCCCCccccc-cCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 196 AQMKRFDEILSAKPKFDHLVKTYPGVCHGWTV-RYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+..+.+++...+ .+++++.|||+-|.+.. +.+ +..+.++.+|++||+++
T Consensus 263 ~~Sk~Lye~A~S---~DKTlKlYpGm~H~Ll~gE~~-------en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 263 KVSKELYEKASS---SDKTLKLYPGMWHSLLSGEPD-------ENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHhccC---CCCceeccccHHHHhhcCCCc-------hhHHHHHHHHHHHHHhc
Confidence 999999998633 37899999999998864 222 35799999999999875
No 9
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=9.5e-22 Score=167.56 Aligned_cols=199 Identities=22% Similarity=0.270 Sum_probs=136.9
Q ss_pred eeCCeeeEEe--CCC--CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC
Q 025027 41 ELGGLKAYVT--GPP--HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 116 (259)
Q Consensus 41 ~~~~~~~~~~--~~~--~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 116 (259)
.-+|+++++. .|+ .++++||++||+.+....++..+++.|+++||.|+++|++ |+|.+...... ..+.
T Consensus 68 ~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~-G~G~S~~~~~~-------~~~~ 139 (349)
T PLN02385 68 NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYP-GFGLSEGLHGY-------IPSF 139 (349)
T ss_pred cCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCC-CCCCCCCCCCC-------cCCH
Confidence 3466665543 443 2345666676654443334578999999999999999995 66544321111 0123
Q ss_pred CcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC---------------------
Q 025027 117 DKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV--------------------- 170 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~--------------------- 170 (259)
+..++|+.++++.+... +..+++|+||||||.+++.++ .+| +++++|+++|...
T Consensus 140 ~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T PLN02385 140 DDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANL 219 (349)
T ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHH
Confidence 44557777788777643 345899999999999999987 444 6888887765210
Q ss_pred --------C-------------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHH
Q 025027 171 --------T-------------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMK 199 (259)
Q Consensus 171 --------~-------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~ 199 (259)
. ...+.++++|+|+++|++|.++|++...
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~ 299 (349)
T PLN02385 220 LPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSK 299 (349)
T ss_pred CCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHH
Confidence 0 0113457899999999999999999999
Q ss_pred HHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 200 RFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
.+++.+.. .+.+++++++++|....+... +..+++.+.+++||++++.
T Consensus 300 ~l~~~~~~---~~~~l~~i~~~gH~l~~e~p~------~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 300 FLYEKASS---SDKKLKLYEDAYHSILEGEPD------EMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHcCC---CCceEEEeCCCeeecccCCCh------hhHHHHHHHHHHHHHHhcc
Confidence 98887732 246889999999987543222 2246799999999998865
No 10
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.89 E-value=4e-22 Score=180.80 Aligned_cols=203 Identities=18% Similarity=0.288 Sum_probs=153.7
Q ss_pred eeeCC--eeeEEeCCCCCC-----eeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhh
Q 025027 40 TELGG--LKAYVTGPPHSK-----KAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWR 111 (259)
Q Consensus 40 ~~~~~--~~~~~~~~~~~~-----~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~ 111 (259)
...+| +.+++..|.+.+ |.|+++|||.... ...+....+.|+.+||.|+.+|+|+..+... .+....
T Consensus 371 ~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~-----~F~~~~ 445 (620)
T COG1506 371 KSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR-----EFADAI 445 (620)
T ss_pred EcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH-----HHHHhh
Confidence 34345 888888887543 5788888885432 2356778899999999999999974333221 112212
Q ss_pred hccCCCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC----------------
Q 025027 112 KNHTTDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT---------------- 171 (259)
Q Consensus 112 ~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~---------------- 171 (259)
...-.....+|+.++++++.+. +.+||+|+|+|+||.+++.++ ..+.+++.++..+....
T Consensus 446 ~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (620)
T COG1506 446 RGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPE 525 (620)
T ss_pred hhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcCCHH
Confidence 2222355678899999988765 567999999999999999987 45678888886653211
Q ss_pred ------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCC
Q 025027 172 ------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVND 233 (259)
Q Consensus 172 ------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~ 233 (259)
.....++++|+|+|||++|..+|.++..++.++|+. .|+++++++||+.+|++..+
T Consensus 526 ~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~-~g~~~~~~~~p~e~H~~~~~----- 599 (620)
T COG1506 526 ENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKR-KGKPVELVVFPDEGHGFSRP----- 599 (620)
T ss_pred HhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHH-cCceEEEEEeCCCCcCCCCc-----
Confidence 113466899999999999999999999999999955 78899999999999999763
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 234 TFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 234 ~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
+...+.++++++||+++++.
T Consensus 600 ----~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 600 ----ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred ----hhHHHHHHHHHHHHHHHhcC
Confidence 34588999999999999875
No 11
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.89 E-value=1.1e-22 Score=161.47 Aligned_cols=170 Identities=21% Similarity=0.319 Sum_probs=125.5
Q ss_pred HHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc---CCCcEEEEeechhHHH
Q 025027 73 YRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKV 149 (259)
Q Consensus 73 ~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~ 149 (259)
|......|+++||.|+.+|+|++.+... .+............++|+.++++++.++ |++||+|+|+|+||.+
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~-----~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGK-----DFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYL 77 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHH-----HHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccch-----hHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccc
Confidence 4567888999999999999974333221 1111011111234568899999999876 6789999999999999
Q ss_pred HHHHhc-Cc-ccceEEEecCCCCC---------------------------------hhhhhc--cCCcEEEeecCCCCC
Q 025027 150 AVKLAS-NQ-DVQAAVLLHPSNVT---------------------------------EDEIKA--VKVPIAVLGAERDNG 192 (259)
Q Consensus 150 a~~~a~-~~-~i~~~i~~~~~~~~---------------------------------~~~~~~--~~~Pvl~i~g~~D~~ 192 (259)
++.++. ++ .++++++.+|.... .....+ +++|+|++||++|..
T Consensus 78 a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~ 157 (213)
T PF00326_consen 78 ALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPR 157 (213)
T ss_dssp HHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSS
T ss_pred cchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCc
Confidence 999884 55 78999998875432 112344 789999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 193 LPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
||++....+.++|+ +.+.++++++||+++|++... +...+..+++.+||++++++
T Consensus 158 Vp~~~s~~~~~~L~-~~g~~~~~~~~p~~gH~~~~~---------~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 158 VPPSQSLRLYNALR-KAGKPVELLIFPGEGHGFGNP---------ENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp STTHHHHHHHHHHH-HTTSSEEEEEETT-SSSTTSH---------HHHHHHHHHHHHHHHHHTT-
T ss_pred cCHHHHHHHHHHHH-hcCCCEEEEEcCcCCCCCCCc---------hhHHHHHHHHHHHHHHHcCC
Confidence 99999999999995 567789999999999987542 23468999999999999875
No 12
>PRK10566 esterase; Provisional
Probab=99.89 E-value=4.4e-21 Score=155.88 Aligned_cols=194 Identities=19% Similarity=0.265 Sum_probs=132.6
Q ss_pred CCeeeEEeCCCC----CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCC-CCCCcchhhhhhccCCC
Q 025027 43 GGLKAYVTGPPH----SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANP-SNPKYDKDTWRKNHTTD 117 (259)
Q Consensus 43 ~~~~~~~~~~~~----~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~-~~~~~~~~~~~~~~~~~ 117 (259)
.++..+...|.. +.|+||++||+.+.. ..+..+++.|+++||.|+++|++ |++.+. .........|.. ...
T Consensus 10 ~~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~~~~~~~~--~~~ 85 (249)
T PRK10566 10 AGIEVLHAFPAGQRDTPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAP-MHGARFSGDEARRLNHFWQ--ILL 85 (249)
T ss_pred cCcceEEEcCCCCCCCCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCC-cccccCCCccccchhhHHH--HHH
Confidence 455555444432 246777777765554 56888999999999999999995 443221 111111111100 012
Q ss_pred cccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCC---------C-------------
Q 025027 118 KGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNV---------T------------- 171 (259)
Q Consensus 118 ~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~---------~------------- 171 (259)
...+++.++++++.++ +.++|+++|||+||.+++.++ ..+++++.+.+.+... +
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (249)
T PRK10566 86 QNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEF 165 (249)
T ss_pred HHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHH
Confidence 2346777888888765 467999999999999999987 5567776655432110 0
Q ss_pred ------------hhhhhcc-CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCC--CceEEecCCCCccccccCCCCChhh
Q 025027 172 ------------EDEIKAV-KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKF--DHLVKTYPGVCHGWTVRYFVNDTFA 236 (259)
Q Consensus 172 ------------~~~~~~~-~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~H~~~~~~~~~~~~~ 236 (259)
...+.++ ++|+|+++|++|.++|++....+.+.++. .+. ++++.+|+|++|.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~H~~~---------- 234 (249)
T PRK10566 166 NNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRE-RGLDKNLTCLWEPGVRHRIT---------- 234 (249)
T ss_pred HHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh-cCCCcceEEEecCCCCCccC----------
Confidence 0112344 68999999999999999999999999954 333 478889999999873
Q ss_pred hhHHHHHHHHHHHHHHHhh
Q 025027 237 VNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 237 ~~~~~~~~~~~~~fl~~~~ 255 (259)
...++++.+||++++
T Consensus 235 ----~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 ----PEALDAGVAFFRQHL 249 (249)
T ss_pred ----HHHHHHHHHHHHhhC
Confidence 457899999999864
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.88 E-value=4e-21 Score=162.43 Aligned_cols=206 Identities=15% Similarity=0.130 Sum_probs=143.5
Q ss_pred ceEeeeCCeeeEEeC--CCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCc-chhhhhhc
Q 025027 37 GTVTELGGLKAYVTG--PPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKY-DKDTWRKN 113 (259)
Q Consensus 37 g~~~~~~~~~~~~~~--~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~-~~~~~~~~ 113 (259)
+.++..+|.++++.. ++.++++||++|| ++.+...|..++..++++||.|+++|++ |+|.+...... ..+ ..
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG-~~~~~~~y~~~~~~l~~~g~~v~~~D~~-G~G~S~~~~~~~~~~---~~ 107 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPG-RIESYVKYAELAYDLFHLGYDVLIIDHR-GQGRSGRLLDDPHRG---HV 107 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECC-ccchHHHHHHHHHHHHHCCCeEEEEcCC-CCCCCCCCCCCCCcC---cc
Confidence 456667787777753 3344455666655 5655567899999999999999999995 65544321110 000 00
Q ss_pred cCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC--------------------
Q 025027 114 HTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------------------- 170 (259)
Q Consensus 114 ~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~-------------------- 170 (259)
.+.+...+|+.++++.+... +..++.++||||||.++..++ .++ .++++|+.+|...
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 12345567888888876544 557899999999999999877 444 6888888776310
Q ss_pred --------------------------Ch-------------------------------------hhhhccCCcEEEeec
Q 025027 171 --------------------------TE-------------------------------------DEIKAVKVPIAVLGA 187 (259)
Q Consensus 171 --------------------------~~-------------------------------------~~~~~~~~Pvl~i~g 187 (259)
.. ....++++|+|+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 00 011346889999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCC--CCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 188 ERDNGLPPAQMKRFDEILSAKP--KFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 188 ~~D~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
++|.+++++....+++.++... ..++++++|+|++|....+.+. ..+++++.+.+||+++
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-------~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-------MRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-------HHHHHHHHHHHHHhhc
Confidence 9999999999999988884321 1346899999999987654322 3588999999999874
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=5.2e-21 Score=164.40 Aligned_cols=180 Identities=23% Similarity=0.344 Sum_probs=132.9
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-C
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-G 134 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~ 134 (259)
+++||++||. +.+...|..+++.|+++||.|+++|++ |+|.+...... ..+.+...+|+.++++++... +
T Consensus 136 ~~~Vl~lHG~-~~~~~~~~~~a~~L~~~Gy~V~~~D~r-GhG~S~~~~~~-------~~~~~~~~~Dl~~~l~~l~~~~~ 206 (395)
T PLN02652 136 RGILIIIHGL-NEHSGRYLHFAKQLTSCGFGVYAMDWI-GHGGSDGLHGY-------VPSLDYVVEDTEAFLEKIRSENP 206 (395)
T ss_pred ceEEEEECCc-hHHHHHHHHHHHHHHHCCCEEEEeCCC-CCCCCCCCCCC-------CcCHHHHHHHHHHHHHHHHHhCC
Confidence 3456666665 444456889999999999999999995 55544322111 012344567899999999765 3
Q ss_pred CCcEEEEeechhHHHHHHHhcCc----ccceEEEecCCCCC---------------------------------------
Q 025027 135 VSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSNVT--------------------------------------- 171 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~i~~~~~~~~--------------------------------------- 171 (259)
..+++++||||||.+++.++.++ +++++|+.+|....
T Consensus 207 ~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~ 286 (395)
T PLN02652 207 GVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAA 286 (395)
T ss_pred CCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHH
Confidence 45899999999999999887544 68899987774200
Q ss_pred ------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCC
Q 025027 172 ------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGV 221 (259)
Q Consensus 172 ------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 221 (259)
...+.++++|+|+++|++|.++|++..+.+++.+.. .++++++|+|+
T Consensus 287 ~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~---~~k~l~~~~ga 363 (395)
T PLN02652 287 LLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAAS---RHKDIKLYDGF 363 (395)
T ss_pred HHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCC---CCceEEEECCC
Confidence 011245689999999999999999999999888632 24688899999
Q ss_pred CccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 222 CHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 222 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
+|....+. ..+++++.+.+||++++.
T Consensus 364 ~H~l~~e~---------~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 364 LHDLLFEP---------EREEVGRDIIDWMEKRLD 389 (395)
T ss_pred eEEeccCC---------CHHHHHHHHHHHHHHHhh
Confidence 99875542 248999999999998875
No 15
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=2.8e-20 Score=154.25 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=153.6
Q ss_pred CCceEeeeCCeeeEEeCCC--CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhh
Q 025027 35 GAGTVTELGGLKAYVTGPP--HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRK 112 (259)
Q Consensus 35 ~~g~~~~~~~~~~~~~~~~--~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 112 (259)
.++.+...++.+.++.... .+...+|++-||.+.+...|..++..|+.+||.|+++|+ +|+|.+.......+..
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~-RGhG~S~r~~rg~~~~--- 85 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDL-RGHGRSPRGQRGHVDS--- 85 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecC-CCCCCCCCCCcCCchh---
Confidence 4678888899888775433 333267777777887778899999999999999999999 4776664211111111
Q ss_pred ccCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cC-cccceEEEecCCCC-------------------
Q 025027 113 NHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNV------------------- 170 (259)
Q Consensus 113 ~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~-~~i~~~i~~~~~~~------------------- 170 (259)
++....|+..+++.+... ...+++|+||||||.+++.++ .. ++++++|+.+|.+.
T Consensus 86 ---f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~ 162 (298)
T COG2267 86 ---FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLG 162 (298)
T ss_pred ---HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccc
Confidence 355568888999988864 567999999999999999988 33 48999998665421
Q ss_pred --------------C-------------------------------------------hhhhhccCCcEEEeecCCCCCC
Q 025027 171 --------------T-------------------------------------------EDEIKAVKVPIAVLGAERDNGL 193 (259)
Q Consensus 171 --------------~-------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~ 193 (259)
. ......+++|+|+++|++|.++
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv 242 (298)
T COG2267 163 RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVV 242 (298)
T ss_pred ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccc
Confidence 0 0113456889999999999999
Q ss_pred C-hHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 194 P-PAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 194 ~-~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
+ .+...++++.+... +++++.|+|+.|...++.+. ..+++++.+.+||.+....
T Consensus 243 ~~~~~~~~~~~~~~~~---~~~~~~~~g~~He~~~E~~~-------~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 243 DNVEGLARFFERAGSP---DKELKVIPGAYHELLNEPDR-------AREEVLKDILAWLAEALPS 297 (298)
T ss_pred cCcHHHHHHHHhcCCC---CceEEecCCcchhhhcCcch-------HHHHHHHHHHHHHHhhccC
Confidence 9 68888888876322 46899999999988765444 2389999999999987653
No 16
>PRK11460 putative hydrolase; Provisional
Probab=99.86 E-value=3.7e-20 Score=148.71 Aligned_cols=179 Identities=15% Similarity=0.130 Sum_probs=118.3
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCC--EEEeeccCCCCCCCCCCCCcchhhhhhccC--C-------CcccccHH
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGF--LVVAPDFFHGDAANPSNPKYDKDTWRKNHT--T-------DKGYEDAK 124 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~--~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~--~-------~~~~~d~~ 124 (259)
.+.||++|| +|.+...+..+++.|++.++ .++.++.+. ... ... ...|+.... . ......+.
T Consensus 16 ~~~vIlLHG-~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~--~~~-~~~---g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 16 QQLLLLFHG-VGDNPVAMGEIGSWFAPAFPDALVVSVGGPE--PSG-NGA---GRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CcEEEEEeC-CCCChHHHHHHHHHHHHHCCCCEEECCCCCC--CcC-CCC---CcccccCCCCCccchHHHHHHHHHHHH
Confidence 345555555 55555678999999998764 444444321 100 000 012221111 0 11122333
Q ss_pred HHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcc-cceEEEecCCCCChhhhhccCCcEEEeecCCCCCCChHHHH
Q 025027 125 PVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQD-VQAAVLLHPSNVTEDEIKAVKVPIAVLGAERDNGLPPAQMK 199 (259)
Q Consensus 125 ~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~-i~~~i~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~ 199 (259)
++++++..+ +.++|+++|||+||.+++.++ ..+. +.+++++++...........+.|+|++||++|.++|.+...
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~~~~ 168 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVAHAV 168 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccccccccCCCcEEEEecCCCCccCHHHHH
Confidence 445554433 456899999999999999977 5554 56677888765322223345789999999999999999999
Q ss_pred HHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 200 RFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
.+.+.++ +.+.+++++.|++++|.+. .+..+.+.+||++.+.
T Consensus 169 ~~~~~L~-~~g~~~~~~~~~~~gH~i~--------------~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 169 AAQEALI-SLGGDVTLDIVEDLGHAID--------------PRLMQFALDRLRYTVP 210 (232)
T ss_pred HHHHHHH-HCCCCeEEEEECCCCCCCC--------------HHHHHHHHHHHHHHcc
Confidence 9999994 4566889999999999983 5677788888887764
No 17
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=8.5e-20 Score=151.95 Aligned_cols=196 Identities=16% Similarity=0.116 Sum_probs=133.8
Q ss_pred ceEeeeCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC
Q 025027 37 GTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 116 (259)
Q Consensus 37 g~~~~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 116 (259)
......++...++.....+.++||++||+.+.. ..|..+.+.|+++ |+|+++|++ |.|.+....... ......++.
T Consensus 10 ~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dlp-G~G~S~~~~~~~-~~~~~~~~~ 85 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNA-DHWRKNTPVLAKS-HRVYAIDLL-GYGYSDKPNPRS-APPNSFYTF 85 (294)
T ss_pred CceEEEcCeEEEEEEcCCCCCeEEEECCCCCCh-hHHHHHHHHHHhC-CeEEEEcCC-CCCCCCCCcccc-ccccccCCH
Confidence 456677888887765433346788888866654 5789999999987 799999995 555443211000 000011223
Q ss_pred CcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-----------------------
Q 025027 117 DKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT----------------------- 171 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~----------------------- 171 (259)
+...+++.++++.+ +.++++|+||||||.+++.++ .+| +++++|++++....
T Consensus 86 ~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 86 ETWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE 162 (294)
T ss_pred HHHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhc
Confidence 44445566666555 457899999999999999988 344 79999987653100
Q ss_pred ----------------------------------------------------------------hhhhhccCCcEEEeec
Q 025027 172 ----------------------------------------------------------------EDEIKAVKVPIAVLGA 187 (259)
Q Consensus 172 ----------------------------------------------------------------~~~~~~~~~Pvl~i~g 187 (259)
...+.++++|+|+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 242 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWG 242 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEe
Confidence 0113456889999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 188 ERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 188 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
++|..+|.+..+.+.+.++ ..++.++++++|.... +..+.+.+.+.+||+++
T Consensus 243 ~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~----------e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 243 EKDPWEPVELGRAYANFDA-----VEDFIVLPGVGHCPQD----------EAPELVNPLIESFVARH 294 (294)
T ss_pred cCCCCCChHHHHHHHhcCC-----ccceEEeCCCCCChhh----------hCHHHHHHHHHHHHhcC
Confidence 9999999888777555431 3578899999996643 23478999999999763
No 18
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=4e-20 Score=137.63 Aligned_cols=142 Identities=28% Similarity=0.470 Sum_probs=113.5
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH--cCC
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA--KGV 135 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~--~~~ 135 (259)
+||++||+.+.. ..|..+++.|+++||.|+.+|++ +.+.. ....++..+++.+.+ .+.
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 60 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYP-GHGDS------------------DGADAVERVLADIRAGYPDP 60 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCT-TSTTS------------------HHSHHHHHHHHHHHHHHCTC
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecC-CCCcc------------------chhHHHHHHHHHHHhhcCCC
Confidence 467777776664 67899999999999999999994 43321 011366777777633 377
Q ss_pred CcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCChhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCce
Q 025027 136 SAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVTEDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHL 214 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 214 (259)
++|+++|||+||.+++.++ .+++++++|++.|+.. .+.+.+.+.|+++++|++|..+|.+....+++.++ .+.+
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~~~-~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~----~~~~ 135 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAARNPRVKAVVLLSPYPD-SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP----GPKE 135 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHHHSTTESEEEEESESSG-CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC----SSEE
T ss_pred CcEEEEEEccCcHHHHHHhhhccceeEEEEecCccc-hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC----CCcE
Confidence 8999999999999999987 4589999999999533 56778889999999999999999999999999984 2679
Q ss_pred EEecCCCCcc
Q 025027 215 VKTYPGVCHG 224 (259)
Q Consensus 215 ~~~~~g~~H~ 224 (259)
+..++|++|+
T Consensus 136 ~~~i~g~~H~ 145 (145)
T PF12695_consen 136 LYIIPGAGHF 145 (145)
T ss_dssp EEEETTS-TT
T ss_pred EEEeCCCcCc
Confidence 9999999994
No 19
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=2.1e-19 Score=155.59 Aligned_cols=181 Identities=18% Similarity=0.215 Sum_probs=131.2
Q ss_pred eeeEEeCCCC-CCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccccc
Q 025027 45 LKAYVTGPPH-SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 122 (259)
Q Consensus 45 ~~~~~~~~~~-~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 122 (259)
+.+|+..|.. .+.++|++|||++.. .+.+..+++.|+++||.|+++|++ |+|.+..... . .+....
T Consensus 181 l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~p-G~G~s~~~~~---~--------~d~~~~ 248 (414)
T PRK05077 181 ITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMP-SVGFSSKWKL---T--------QDSSLL 248 (414)
T ss_pred EEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCC-CCCCCCCCCc---c--------ccHHHH
Confidence 8888887753 334567777777764 346778899999999999999995 5554322100 0 011122
Q ss_pred HHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC--------------------------
Q 025027 123 AKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-------------------------- 171 (259)
Q Consensus 123 ~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~-------------------------- 171 (259)
..++++++.+. +.++|+++|||+||.+++.++ .++ +|+++|+++|....
T Consensus 249 ~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~~ 328 (414)
T PRK05077 249 HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGMH 328 (414)
T ss_pred HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCCC
Confidence 35788888765 668999999999999999988 445 89999998765320
Q ss_pred h------------------hhh-hccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCC
Q 025027 172 E------------------DEI-KAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVN 232 (259)
Q Consensus 172 ~------------------~~~-~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 232 (259)
. ..+ .++++|+|+++|++|.++|++..+.+.+.++ +.++..+|++ |.+
T Consensus 329 ~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-----~~~l~~i~~~-~~~------- 395 (414)
T PRK05077 329 DASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-----DGKLLEIPFK-PVY------- 395 (414)
T ss_pred CCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-----CCeEEEccCC-Ccc-------
Confidence 0 001 3578899999999999999999998777652 4478889974 433
Q ss_pred ChhhhhHHHHHHHHHHHHHHHhh
Q 025027 233 DTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
+..+++...+.+||++++
T Consensus 396 -----e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 396 -----RNFDKALQEISDWLEDRL 413 (414)
T ss_pred -----CCHHHHHHHHHHHHHHHh
Confidence 234899999999999876
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.83 E-value=1.7e-18 Score=143.07 Aligned_cols=181 Identities=15% Similarity=0.173 Sum_probs=121.0
Q ss_pred CeeeEEeCCCCCCeeEEEEeccCCCCchhHH---HHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccc
Q 025027 44 GLKAYVTGPPHSKKAVLMISDIYGDEPPIYR---SVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 120 (259)
Q Consensus 44 ~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~---~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (259)
+...++.... ..++||++||+.+.. ..|. .....++++||.|+++|++ |+|.+....... ....
T Consensus 19 ~~~~~y~~~g-~~~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~-G~G~S~~~~~~~----------~~~~ 85 (282)
T TIGR03343 19 NFRIHYNEAG-NGEAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSP-GFNKSDAVVMDE----------QRGL 85 (282)
T ss_pred ceeEEEEecC-CCCeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCC-CCCCCCCCcCcc----------cccc
Confidence 3556665543 346788888865543 2333 3455677789999999995 665443211000 0000
Q ss_pred ccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC----------------------------
Q 025027 121 EDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV---------------------------- 170 (259)
Q Consensus 121 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~---------------------------- 170 (259)
.....+.+.+...+.++++++||||||.+++.++ .+| +++++|+++|...
T Consensus 86 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
T TIGR03343 86 VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETL 165 (282)
T ss_pred hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHH
Confidence 1223334444444678999999999999999988 444 7888888664210
Q ss_pred ----------C---------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHH
Q 025027 171 ----------T---------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRF 201 (259)
Q Consensus 171 ----------~---------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~ 201 (259)
. ...+.++++|+|+++|++|..+|++..+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~ 245 (282)
T TIGR03343 166 KQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKL 245 (282)
T ss_pred HHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHH
Confidence 0 001245688999999999999999888888
Q ss_pred HHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 202 DEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
.+.++ +.++++++++||....+ ..+.+.+.+.+||+
T Consensus 246 ~~~~~-----~~~~~~i~~agH~~~~e----------~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 246 LWNMP-----DAQLHVFSRCGHWAQWE----------HADAFNRLVIDFLR 281 (282)
T ss_pred HHhCC-----CCEEEEeCCCCcCCccc----------CHHHHHHHHHHHhh
Confidence 88763 56888999999976432 24778888999985
No 21
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.82 E-value=3.1e-18 Score=143.10 Aligned_cols=195 Identities=16% Similarity=0.191 Sum_probs=130.7
Q ss_pred CceEeeeCC-----eeeEEeCCCC-CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhh
Q 025027 36 AGTVTELGG-----LKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDT 109 (259)
Q Consensus 36 ~g~~~~~~~-----~~~~~~~~~~-~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~ 109 (259)
.+...++++ .+.++..... ..++||++||+.+. ...|..+++.|.++||.|+++|++ |+|.+......
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~-~~~w~~~~~~L~~~gy~vi~~Dl~-G~G~S~~~~~~---- 93 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSW-SYLYRKMIPILAAAGHRVIAPDLI-GFGRSDKPTRR---- 93 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCc-hhhHHHHHHHHHhCCCEEEEECCC-CCCCCCCCCCc----
Confidence 567777777 7777764332 34678888886555 457899999999889999999995 55543221100
Q ss_pred hhhccCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC-----------------
Q 025027 110 WRKNHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV----------------- 170 (259)
Q Consensus 110 ~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~----------------- 170 (259)
..++.+...+++.++++. .+.+++.|+|||+||.++..++ .+| ++++++++++...
T Consensus 94 --~~~~~~~~a~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 168 (302)
T PRK00870 94 --EDYTYARHVEWMRSWFEQ---LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFS 168 (302)
T ss_pred --ccCCHHHHHHHHHHHHHH---cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhccc
Confidence 011122333444444443 4667899999999999999988 444 7888877654210
Q ss_pred --------------------C------------h------------------------------hhhhccCCcEEEeecC
Q 025027 171 --------------------T------------E------------------------------DEIKAVKVPIAVLGAE 188 (259)
Q Consensus 171 --------------------~------------~------------------------------~~~~~~~~Pvl~i~g~ 188 (259)
. . ..+.++++|+++++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 248 (302)
T PRK00870 169 QYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSD 248 (302)
T ss_pred ccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecC
Confidence 0 0 0124568899999999
Q ss_pred CCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 189 RDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 189 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+|.++|.+. ..+.+.++.. ...++..+++++|.... +..+.+.+.+.+||+++
T Consensus 249 ~D~~~~~~~-~~~~~~~~~~--~~~~~~~i~~~gH~~~~----------e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 249 SDPITGGGD-AILQKRIPGA--AGQPHPTIKGAGHFLQE----------DSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCcccCch-HHHHhhcccc--cccceeeecCCCccchh----------hChHHHHHHHHHHHhcC
Confidence 999998766 7777766321 11346789999997643 23478888999999764
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.82 E-value=2.5e-18 Score=143.23 Aligned_cols=192 Identities=16% Similarity=0.206 Sum_probs=132.8
Q ss_pred CceEeeeCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccC
Q 025027 36 AGTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 115 (259)
Q Consensus 36 ~g~~~~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 115 (259)
+....+.++.+.++.... .+++||++||..+.. ..|..+++.|++++ .|+++|++ |.|.+..... .++
T Consensus 8 ~~~~~~~~g~~i~y~~~G-~g~~vvllHG~~~~~-~~w~~~~~~L~~~~-~via~D~~-G~G~S~~~~~--------~~~ 75 (295)
T PRK03592 8 EMRRVEVLGSRMAYIETG-EGDPIVFLHGNPTSS-YLWRNIIPHLAGLG-RCLAPDLI-GMGASDKPDI--------DYT 75 (295)
T ss_pred cceEEEECCEEEEEEEeC-CCCEEEEECCCCCCH-HHHHHHHHHHhhCC-EEEEEcCC-CCCCCCCCCC--------CCC
Confidence 345567788888776543 356888888876665 57889999999985 99999995 6555433211 112
Q ss_pred CCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC-------C---------------
Q 025027 116 TDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------T--------------- 171 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~-------~--------------- 171 (259)
.+...+|+.++++.+ +.+++.++|||+||.+++.++ .+| +++++|++++... .
T Consensus 76 ~~~~a~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (295)
T PRK03592 76 FADHARYLDAWFDAL---GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGE 152 (295)
T ss_pred HHHHHHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccc
Confidence 334445566666555 567899999999999999988 445 7898888764210 0
Q ss_pred ----------------h----------------------------------------------------hhhhccCCcEE
Q 025027 172 ----------------E----------------------------------------------------DEIKAVKVPIA 183 (259)
Q Consensus 172 ----------------~----------------------------------------------------~~~~~~~~Pvl 183 (259)
. ..+.++++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 232 (295)
T PRK03592 153 GEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKL 232 (295)
T ss_pred ccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeE
Confidence 0 00133688999
Q ss_pred EeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 184 VLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 184 ~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
+++|++|.++++....++...+.. +.++.+++++||....+ ..+++.+.+.+|+++...
T Consensus 233 ii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e----------~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 233 LINAEPGAILTTGAIRDWCRSWPN----QLEITVFGAGLHFAQED----------SPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred EEeccCCcccCcHHHHHHHHHhhh----hcceeeccCcchhhhhc----------CHHHHHHHHHHHHHHhcc
Confidence 999999999955555555443311 35788899999977532 248899999999987654
No 23
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.82 E-value=2.1e-18 Score=142.09 Aligned_cols=185 Identities=18% Similarity=0.186 Sum_probs=131.0
Q ss_pred eeeEEeCCCC-CCeeEEEEeccCCCC---chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccc
Q 025027 45 LKAYVTGPPH-SKKAVLMISDIYGDE---PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 120 (259)
Q Consensus 45 ~~~~~~~~~~-~~~~vil~~~~~g~~---~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (259)
+.+++..|.. .++++|++||+.+.. ...+..+++.|+++||.|+++|++ |++.+.... . ..+...
T Consensus 14 l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~-G~G~S~~~~-~---------~~~~~~ 82 (274)
T TIGR03100 14 LVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYR-GMGDSEGEN-L---------GFEGID 82 (274)
T ss_pred EEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCC-CCCCCCCCC-C---------CHHHHH
Confidence 6677777764 346799999877532 234567899999999999999994 666543211 1 123445
Q ss_pred ccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC--------------------------
Q 025027 121 EDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT-------------------------- 171 (259)
Q Consensus 121 ~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~-------------------------- 171 (259)
+|+.+++++++.. +.++|+++|||+||.+++.++ .+++++++|+++|+...
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKL 162 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHh
Confidence 7899999999765 457899999999999999987 44689999999886331
Q ss_pred -------------------------------------hhhhhccCCcEEEeecCCCCCCChHHH------HHHHHHHhcC
Q 025027 172 -------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQM------KRFDEILSAK 208 (259)
Q Consensus 172 -------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~------~~~~~~l~~~ 208 (259)
...+..+++|+++++|++|...+ +.. ....+.+.
T Consensus 163 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~-- 239 (274)
T TIGR03100 163 LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALE-- 239 (274)
T ss_pred cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhh--
Confidence 00123567899999999998753 222 22233331
Q ss_pred CCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 209 PKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 209 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
...+++..+++++|.++.+ ...+++.+.+.+||++
T Consensus 240 -~~~v~~~~~~~~~H~l~~e---------~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 240 -DPGIERVEIDGADHTFSDR---------VWREWVAARTTEWLRR 274 (274)
T ss_pred -cCCeEEEecCCCCcccccH---------HHHHHHHHHHHHHHhC
Confidence 1257889999999965443 2348899999999964
No 24
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.82 E-value=5.8e-19 Score=140.47 Aligned_cols=190 Identities=22% Similarity=0.324 Sum_probs=110.1
Q ss_pred EeCCCCCCeeEEEEeccCCCCchhHHHHHH-HHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC-----------
Q 025027 49 VTGPPHSKKAVLMISDIYGDEPPIYRSVAD-KVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT----------- 116 (259)
Q Consensus 49 ~~~~~~~~~~vil~~~~~g~~~~~~~~~a~-~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~----------- 116 (259)
+..|..+..++|++.||+|.+.+.+..+.. .+......++.++.+........ ......|+.....
T Consensus 6 i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~--g~~~~~Wf~~~~~~~~~~~~~~~i 83 (216)
T PF02230_consen 6 IIEPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPG--GYRMPAWFDIYDFDPEGPEDEAGI 83 (216)
T ss_dssp EE--SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGT--T-EEE-SS-BSCSSSSSEB-HHHH
T ss_pred EeCCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCccccc--ccCCCceeeccCCCcchhhhHHHH
Confidence 345555555556666667877654444444 22334677877765310000000 0000123222111
Q ss_pred CcccccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHh-cC-cccceEEEecCCCCChhhhh----c-cCCcEEEeec
Q 025027 117 DKGYEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVTEDEIK----A-VKVPIAVLGA 187 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a-~~-~~i~~~i~~~~~~~~~~~~~----~-~~~Pvl~i~g 187 (259)
.+..+.+.++|+...+. +.+||+|+|||+||.+++.++ .. ..+.++++++|+........ . .+.|++++||
T Consensus 84 ~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG 163 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEALAKTPILIIHG 163 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccccCCCcEEEEec
Confidence 12223344455544332 567999999999999999988 44 48999999999875532221 1 2679999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 188 ERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 188 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
++|+++|.+..+...+.|+ +.+.+++++.|+|.+|.+. .+..+.+.+||+++.
T Consensus 164 ~~D~vvp~~~~~~~~~~L~-~~~~~v~~~~~~g~gH~i~--------------~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 164 DEDPVVPFEWAEKTAEFLK-AAGANVEFHEYPGGGHEIS--------------PEELRDLREFLEKHI 216 (216)
T ss_dssp TT-SSSTHHHHHHHHHHHH-CTT-GEEEEEETT-SSS----------------HHHHHHHHHHHHHH-
T ss_pred CCCCcccHHHHHHHHHHHH-hcCCCEEEEEcCCCCCCCC--------------HHHHHHHHHHHhhhC
Confidence 9999999999999999994 4566899999999999773 678889999999863
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.81 E-value=1.6e-18 Score=143.08 Aligned_cols=187 Identities=14% Similarity=0.188 Sum_probs=129.2
Q ss_pred eEeeeCCeeeEEeCC--CCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccC
Q 025027 38 TVTELGGLKAYVTGP--PHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 115 (259)
Q Consensus 38 ~~~~~~~~~~~~~~~--~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 115 (259)
....+++.+.++... ....++||++||..+.. ..|..+.+.|.+ +|.|+++|++ |+|.+... .. .++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~-~~w~~~~~~L~~-~~~vi~~Dl~-G~G~S~~~-~~-------~~~ 73 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANL-ELVFPFIEALDP-DLEVIAFDVP-GVGGSSTP-RH-------PYR 73 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcch-HHHHHHHHHhcc-CceEEEECCC-CCCCCCCC-CC-------cCc
Confidence 344567766665432 22336789998865554 578889999877 5999999995 55544321 11 112
Q ss_pred CCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhc-Cc-ccceEEEecCCCC-----------------------
Q 025027 116 TDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV----------------------- 170 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~i~~~~~~~----------------------- 170 (259)
.+...+++.++++.+ +.+++.|+||||||.+++.++. .| +++++|+.++...
T Consensus 74 ~~~~~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 74 FPGLAKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP 150 (276)
T ss_pred HHHHHHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcc
Confidence 344456666666666 4568999999999999999883 33 6777776553210
Q ss_pred -----------------C-------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHH
Q 025027 171 -----------------T-------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFD 202 (259)
Q Consensus 171 -----------------~-------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~ 202 (259)
. ...+.++++|+|+++|++|.++|++..+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred ccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 0 0123567889999999999999999999888
Q ss_pred HHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 203 EILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 203 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+.++ ..++.++++ +|....+ ..+++.+.+.+|+++.
T Consensus 231 ~~~~-----~~~~~~i~~-gH~~~~e----------~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 231 WRIP-----NAELHIIDD-GHLFLIT----------RAEAVAPIIMKFLAEE 266 (276)
T ss_pred HhCC-----CCEEEEEcC-CCchhhc----------cHHHHHHHHHHHHHHh
Confidence 8773 346777785 9965432 2478999999999874
No 26
>PRK06489 hypothetical protein; Provisional
Probab=99.81 E-value=6.2e-18 Score=144.65 Aligned_cols=195 Identities=15% Similarity=0.168 Sum_probs=121.8
Q ss_pred eeCCeeeEEeCCCC-C-------CeeEEEEeccCCCCchhH-HHHHHHHH-------hcCCEEEeeccCCCCCCCCCCCC
Q 025027 41 ELGGLKAYVTGPPH-S-------KKAVLMISDIYGDEPPIY-RSVADKVA-------GAGFLVVAPDFFHGDAANPSNPK 104 (259)
Q Consensus 41 ~~~~~~~~~~~~~~-~-------~~~vil~~~~~g~~~~~~-~~~a~~la-------~~G~~v~~~d~~~g~~~~~~~~~ 104 (259)
..++++.++..-.. . .|+||++||+.++...++ ..+.+.|. .++|.|+++|++ |+|.+.....
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~-GhG~S~~p~~ 124 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGI-GHGKSSKPSD 124 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCC-CCCCCCCCCc
Confidence 56778877764432 2 578999998877653322 24555542 457999999995 6654432111
Q ss_pred cchhhhhhccCCCcccccHHHHHHHH-HHcCCCcEE-EEeechhHHHHHHHh-cCc-ccceEEEecCCCC----------
Q 025027 105 YDKDTWRKNHTTDKGYEDAKPVIAAL-KAKGVSAVG-AAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV---------- 170 (259)
Q Consensus 105 ~~~~~~~~~~~~~~~~~d~~~~i~~l-~~~~~~~i~-l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~---------- 170 (259)
. .......++.+.. +..+++.+ ...+.+++. |+||||||.+++.++ .+| +++++|++++...
T Consensus 125 ~-~~~~~~~~~~~~~---a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~ 200 (360)
T PRK06489 125 G-LRAAFPRYDYDDM---VEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWR 200 (360)
T ss_pred C-CCCCCCcccHHHH---HHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHH
Confidence 0 0000000111112 22333333 223556775 899999999999988 444 6788776543200
Q ss_pred -----------------------------------------------C--------------------------------
Q 025027 171 -----------------------------------------------T-------------------------------- 171 (259)
Q Consensus 171 -----------------------------------------------~-------------------------------- 171 (259)
.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T PRK06489 201 RMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSR 280 (360)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh
Confidence 0
Q ss_pred ----hhhhhccCCcEEEeecCCCCCCChHHH--HHHHHHHhcCCCCCceEEecCCC----CccccccCCCCChhhhhHHH
Q 025027 172 ----EDEIKAVKVPIAVLGAERDNGLPPAQM--KRFDEILSAKPKFDHLVKTYPGV----CHGWTVRYFVNDTFAVNSAA 241 (259)
Q Consensus 172 ----~~~~~~~~~Pvl~i~g~~D~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~~~~~~ 241 (259)
...+.+|++|+|+++|++|.++|++.. +.+.+.++ +.++.+++++ ||... + . .+
T Consensus 281 ~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----~a~l~~i~~a~~~~GH~~~-e-~---------P~ 344 (360)
T PRK06489 281 DYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-----HGRLVLIPASPETRGHGTT-G-S---------AK 344 (360)
T ss_pred ccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----CCeEEEECCCCCCCCcccc-c-C---------HH
Confidence 001345788999999999999998765 66777663 3578899985 99763 2 2 37
Q ss_pred HHHHHHHHHHHHhhh
Q 025027 242 EAHEDMINWFEKHVK 256 (259)
Q Consensus 242 ~~~~~~~~fl~~~~~ 256 (259)
.+.+.+.+||+++.+
T Consensus 345 ~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 345 FWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHHHHHHHhccc
Confidence 889999999987643
No 27
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.80 E-value=1.1e-17 Score=137.64 Aligned_cols=189 Identities=20% Similarity=0.291 Sum_probs=129.7
Q ss_pred CceEeeeCCeeeEEeCCCC-CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhcc
Q 025027 36 AGTVTELGGLKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 114 (259)
Q Consensus 36 ~g~~~~~~~~~~~~~~~~~-~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 114 (259)
.+.+++.++++.++..... ..++||++||..+.. ..|..+.+.|++ +|.|+++|++ |+|.+...... ..
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~-G~G~S~~~~~~-------~~ 76 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGAST-HSWRDLMPPLAR-SFRVVAPDLP-GHGFTRAPFRF-------RF 76 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCH-HHHHHHHHHHhh-CcEEEeecCC-CCCCCCCcccc-------CC
Confidence 4567788998888765432 346788888876654 578889998877 5999999995 55543221110 11
Q ss_pred CCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC---------------------
Q 025027 115 TTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT--------------------- 171 (259)
Q Consensus 115 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~--------------------- 171 (259)
+.+...+++.++++. .+.++++|+||||||.+++.++ ..+ ++++++++.+....
T Consensus 77 ~~~~~~~~l~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (278)
T TIGR03056 77 TLPSMAEDLSALCAA---EGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPF 153 (278)
T ss_pred CHHHHHHHHHHHHHH---cCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhccc
Confidence 223333444444443 3556899999999999999988 334 57777766542100
Q ss_pred -----------------------------------------------------------hhhhhccCCcEEEeecCCCCC
Q 025027 172 -----------------------------------------------------------EDEIKAVKVPIAVLGAERDNG 192 (259)
Q Consensus 172 -----------------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~ 192 (259)
...++++++|+++++|++|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 154 TPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred chHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 001234678999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 193 LPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
+|++..+.+.+.++ ..++..+++++|.+..+ ..+++.+.+.+||+
T Consensus 234 vp~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRVP-----TATLHVVPGGGHLVHEE----------QADGVVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhcc-----CCeEEEECCCCCccccc----------CHHHHHHHHHHHhC
Confidence 99988888877763 35788899999977542 24788888888874
No 28
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.80 E-value=2.7e-18 Score=145.10 Aligned_cols=160 Identities=16% Similarity=0.199 Sum_probs=114.2
Q ss_pred HHHHHHHHhcCCEEEeeccCCCCCCCCCCC--CcchhhhhhccCCCcccccHHHHHHHHHH-------------------
Q 025027 74 RSVADKVAGAGFLVVAPDFFHGDAANPSNP--KYDKDTWRKNHTTDKGYEDAKPVIAALKA------------------- 132 (259)
Q Consensus 74 ~~~a~~la~~G~~v~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~i~~l~~------------------- 132 (259)
..+++.|+++||.|+++|++ |+|.+.... ...+ ...+..++|+..+++.++.
T Consensus 64 ~~~~~~l~~~G~~V~~~D~r-GHG~S~~~~~~~g~~------~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (332)
T TIGR01607 64 DSWIENFNKNGYSVYGLDLQ-GHGESDGLQNLRGHI------NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVN 136 (332)
T ss_pred HHHHHHHHHCCCcEEEeccc-ccCCCccccccccch------hhHHHHHHHHHHHHHHhhhhhccccccccccccccccc
Confidence 46899999999999999995 655433211 1111 1235566788888888754
Q ss_pred c-C-CCcEEEEeechhHHHHHHHhc-C---------cccceEEEecCCC-------------C-----------------
Q 025027 133 K-G-VSAVGAAGFCWGGKVAVKLAS-N---------QDVQAAVLLHPSN-------------V----------------- 170 (259)
Q Consensus 133 ~-~-~~~i~l~G~S~Gg~~a~~~a~-~---------~~i~~~i~~~~~~-------------~----------------- 170 (259)
. . ..++.|+||||||.+++.++. . ..++++|+.+|.. .
T Consensus 137 ~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~ 216 (332)
T TIGR01607 137 TKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTF 216 (332)
T ss_pred cccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcc
Confidence 1 2 358999999999999998762 1 1578888655421 0
Q ss_pred ---C----------------------------------------hhhhhcc--CCcEEEeecCCCCCCChHHHHHHHHHH
Q 025027 171 ---T----------------------------------------EDEIKAV--KVPIAVLGAERDNGLPPAQMKRFDEIL 205 (259)
Q Consensus 171 ---~----------------------------------------~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~l 205 (259)
. ......+ ++|+|+++|++|.+++++....+++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~ 296 (332)
T TIGR01607 217 RISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKL 296 (332)
T ss_pred cccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhc
Confidence 0 0123344 689999999999999999988888776
Q ss_pred hcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 206 SAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 206 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
.. .++++++|+|++|.+..+.. .+++.+.+.+||+
T Consensus 297 ~~---~~~~l~~~~g~~H~i~~E~~---------~~~v~~~i~~wL~ 331 (332)
T TIGR01607 297 SI---SNKELHTLEDMDHVITIEPG---------NEEVLKKIIEWIS 331 (332)
T ss_pred cC---CCcEEEEECCCCCCCccCCC---------HHHHHHHHHHHhh
Confidence 22 25688999999998876533 3789999999986
No 29
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.79 E-value=9.2e-18 Score=136.59 Aligned_cols=170 Identities=14% Similarity=0.207 Sum_probs=122.1
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
..+|+||++||..+.. ..|..++..|++ +|.|+++|++ |+|.+..... .+.++..+|+.++++.+
T Consensus 14 ~~~~~iv~lhG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~-G~G~s~~~~~---------~~~~~~~~d~~~~l~~l--- 78 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL-DNLGVLARDLVN-DHDIIQVDMR-NHGLSPRDPV---------MNYPAMAQDLLDTLDAL--- 78 (255)
T ss_pred CCCCCEEEECCCCCch-hHHHHHHHHHhh-CCeEEEECCC-CCCCCCCCCC---------CCHHHHHHHHHHHHHHc---
Confidence 3457899999987765 578889999876 5999999995 5554332111 22344456666666665
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC------------------------------------h---
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------------------E--- 172 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------------------------------~--- 172 (259)
+.++++++||||||.+++.++ ..+ +|++++++.+.... .
T Consensus 79 ~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PRK10673 79 QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGV 158 (255)
T ss_pred CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHH
Confidence 556899999999999999988 334 79999886432100 0
Q ss_pred ------------------------------hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCC
Q 025027 173 ------------------------------DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVC 222 (259)
Q Consensus 173 ------------------------------~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 222 (259)
+..+.+++|+|+++|++|..++++..+.+.+.++ +.++.++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~g 233 (255)
T PRK10673 159 IQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-----QARAHVIAGAG 233 (255)
T ss_pred HHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-----CcEEEEeCCCC
Confidence 0022346899999999999999888888877763 45788899999
Q ss_pred ccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 223 HGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 223 H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
|....+ ..+++.+.+.+||++
T Consensus 234 H~~~~~----------~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 234 HWVHAE----------KPDAVLRAIRRYLND 254 (255)
T ss_pred Ceeecc----------CHHHHHHHHHHHHhc
Confidence 966431 237788999999875
No 30
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.79 E-value=9.7e-18 Score=136.05 Aligned_cols=195 Identities=17% Similarity=0.204 Sum_probs=136.1
Q ss_pred CCceEeeeCCeeeEEeCCC-CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCCCCcchhhhhh
Q 025027 35 GAGTVTELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRK 112 (259)
Q Consensus 35 ~~g~~~~~~~~~~~~~~~~-~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~ 112 (259)
....+.+.++++..+.... +.+|.|+++|| +-..+..|+.....|+.+||+|+++|++ +|.+..+.. ..
T Consensus 22 ~~hk~~~~~gI~~h~~e~g~~~gP~illlHG-fPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~--------~~ 92 (322)
T KOG4178|consen 22 ISHKFVTYKGIRLHYVEGGPGDGPIVLLLHG-FPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPH--------IS 92 (322)
T ss_pred cceeeEEEccEEEEEEeecCCCCCEEEEEcc-CCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCC--------cc
Confidence 4567778888888886543 33455555555 5555578899999999999999999997 455544443 12
Q ss_pred ccCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cC-cccceEEEecCCCCC-------------------
Q 025027 113 NHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVT------------------- 171 (259)
Q Consensus 113 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~-~~i~~~i~~~~~~~~------------------- 171 (259)
.++.....+|+..+++.| +.+|+.++||+||+.+++.++ .. +++++.++++.....
T Consensus 93 ~Yt~~~l~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~ 169 (322)
T KOG4178|consen 93 EYTIDELVGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYI 169 (322)
T ss_pred eeeHHHHHHHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCcccee
Confidence 233455567777777777 467999999999999999988 33 488888886532110
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 170 ~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 170 CLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred EeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence
Q ss_pred -hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHH
Q 025027 172 -EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINW 250 (259)
Q Consensus 172 -~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~f 250 (259)
+....++++|+++++|++|.+.+.......++..-. . ..+..+++|++|.... .. .+++.+.+++|
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp--~-l~~~vv~~~~gH~vqq-e~---------p~~v~~~i~~f 316 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVP--R-LTERVVIEGIGHFVQQ-EK---------PQEVNQAILGF 316 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhhc--c-ccceEEecCCcccccc-cC---------HHHHHHHHHHH
Confidence 011345788999999999999886533333333311 1 3367889999995533 22 38899999999
Q ss_pred HHHh
Q 025027 251 FEKH 254 (259)
Q Consensus 251 l~~~ 254 (259)
|++.
T Consensus 317 ~~~~ 320 (322)
T KOG4178|consen 317 INSF 320 (322)
T ss_pred HHhh
Confidence 9875
No 31
>PLN02965 Probable pheophorbidase
Probab=99.79 E-value=4.5e-18 Score=138.73 Aligned_cols=169 Identities=13% Similarity=0.134 Sum_probs=119.4
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC-C
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV-S 136 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~-~ 136 (259)
.||++||+++.. ..|..+.+.|++.||.|+++|++ |+|.+...... .++.+...+|+.++++.+ +. +
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~-G~G~S~~~~~~-------~~~~~~~a~dl~~~l~~l---~~~~ 72 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLT-GAGISLTDSNT-------VSSSDQYNRPLFALLSDL---PPDH 72 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCC-cCCCCCCCccc-------cCCHHHHHHHHHHHHHhc---CCCC
Confidence 478887776654 57889999999889999999995 66544321111 112233445566666654 33 4
Q ss_pred cEEEEeechhHHHHHHHhc-C-cccceEEEecCC---CC----------------------------C-------hh---
Q 025027 137 AVGAAGFCWGGKVAVKLAS-N-QDVQAAVLLHPS---NV----------------------------T-------ED--- 173 (259)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a~-~-~~i~~~i~~~~~---~~----------------------------~-------~~--- 173 (259)
+++++||||||.++..++. + ++|+++|++++. .. . ..
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHH
Confidence 8999999999999999883 3 378877776542 00 0 00
Q ss_pred -----------------------------------hhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEec
Q 025027 174 -----------------------------------EIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTY 218 (259)
Q Consensus 174 -----------------------------------~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (259)
.+..+++|+++++|++|..+|++..+.+.+.++ ..++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----~a~~~~i 227 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-----PAQTYVL 227 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-----cceEEEe
Confidence 012478899999999999999999988888773 3478889
Q ss_pred CCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 219 PGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 219 ~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
+++||.... +..+++.+.+.+|++.
T Consensus 228 ~~~GH~~~~----------e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 228 EDSDHSAFF----------SVPTTLFQYLLQAVSS 252 (255)
T ss_pred cCCCCchhh----------cCHHHHHHHHHHHHHH
Confidence 999997754 2347788888888765
No 32
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.79 E-value=1e-17 Score=135.81 Aligned_cols=170 Identities=18% Similarity=0.276 Sum_probs=116.6
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG 134 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 134 (259)
..++||++||+.+. ...|..+++.|.+ ||.|+++|++ |+|.+....... .+.++..+++.++++.+ +
T Consensus 12 ~~~~iv~lhG~~~~-~~~~~~~~~~l~~-~~~vi~~D~~-G~G~S~~~~~~~-------~~~~~~~~~~~~~i~~~---~ 78 (257)
T TIGR03611 12 DAPVVVLSSGLGGS-GSYWAPQLDVLTQ-RFHVVTYDHR-GTGRSPGELPPG-------YSIAHMADDVLQLLDAL---N 78 (257)
T ss_pred CCCEEEEEcCCCcc-hhHHHHHHHHHHh-ccEEEEEcCC-CCCCCCCCCccc-------CCHHHHHHHHHHHHHHh---C
Confidence 34667777776555 4577788887765 6999999995 554432211111 11233334555555544 5
Q ss_pred CCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-----------------------------------------
Q 025027 135 VSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT----------------------------------------- 171 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~----------------------------------------- 171 (259)
..++.++|||+||.+++.++ ..+ .++++|++++....
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENA 158 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccc
Confidence 57899999999999999987 334 68888876642110
Q ss_pred --------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecC
Q 025027 172 --------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYP 219 (259)
Q Consensus 172 --------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 219 (259)
...+.++++|+++++|++|.++|++....+.+.++ ..++..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~ 233 (257)
T TIGR03611 159 ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-----NAQLKLLP 233 (257)
T ss_pred hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-----CceEEEEC
Confidence 01234578899999999999999998888888763 34678889
Q ss_pred CCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 220 GVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 220 g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
++||.+..+ ..+++.+.+.+||+
T Consensus 234 ~~gH~~~~~----------~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 234 YGGHASNVT----------DPETFNRALLDFLK 256 (257)
T ss_pred CCCCCcccc----------CHHHHHHHHHHHhc
Confidence 999976432 23778888999985
No 33
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.79 E-value=1.2e-17 Score=136.32 Aligned_cols=162 Identities=15% Similarity=0.173 Sum_probs=114.6
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVS 136 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 136 (259)
++||++||+.+. ...|..+.+.|.++ |.|+++|++ |+|.+..... ..+...++.+.....+
T Consensus 14 ~~ivllHG~~~~-~~~w~~~~~~L~~~-~~vi~~Dl~-G~G~S~~~~~----------------~~~~~~~~~l~~~~~~ 74 (256)
T PRK10349 14 VHLVLLHGWGLN-AEVWRCIDEELSSH-FTLHLVDLP-GFGRSRGFGA----------------LSLADMAEAVLQQAPD 74 (256)
T ss_pred CeEEEECCCCCC-hhHHHHHHHHHhcC-CEEEEecCC-CCCCCCCCCC----------------CCHHHHHHHHHhcCCC
Confidence 468888885554 46788899999875 999999995 6654432110 1223334444444567
Q ss_pred cEEEEeechhHHHHHHHhc-Cc-ccceEEEecCCCCC-------------------------------------------
Q 025027 137 AVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT------------------------------------------- 171 (259)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a~-~~-~i~~~i~~~~~~~~------------------------------------------- 171 (259)
++.++||||||.+++.++. .| +++++|++++....
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA 154 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH
Confidence 8999999999999999883 34 78888887652100
Q ss_pred ----------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEe
Q 025027 172 ----------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKT 217 (259)
Q Consensus 172 ----------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 217 (259)
...+.++++|+|+++|++|.++|.+....+.+.++ ..++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-----~~~~~~ 229 (256)
T PRK10349 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-----HSESYI 229 (256)
T ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-----CCeEEE
Confidence 01245568899999999999999888887777763 457889
Q ss_pred cCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 218 YPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 218 ~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
++++||....+ ..+.+.+.+.+|-.
T Consensus 230 i~~~gH~~~~e----------~p~~f~~~l~~~~~ 254 (256)
T PRK10349 230 FAKAAHAPFIS----------HPAEFCHLLVALKQ 254 (256)
T ss_pred eCCCCCCcccc----------CHHHHHHHHHHHhc
Confidence 99999976542 33677777776643
No 34
>PRK10162 acetyl esterase; Provisional
Probab=99.78 E-value=2.3e-17 Score=138.63 Aligned_cols=188 Identities=18% Similarity=0.173 Sum_probs=135.4
Q ss_pred eeeEEeCCCCC-CeeEEEEeccCC--CCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccc
Q 025027 45 LKAYVTGPPHS-KKAVLMISDIYG--DEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 120 (259)
Q Consensus 45 ~~~~~~~~~~~-~~~vil~~~~~g--~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (259)
+++.+..|... .|.||++|||.- .+...+..+++.|++. |+.|+++||+ ..+ + ..+....
T Consensus 69 i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYr-lap---e------------~~~p~~~ 132 (318)
T PRK10162 69 VETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYT-LSP---E------------ARFPQAI 132 (318)
T ss_pred eEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCC-CCC---C------------CCCCCcH
Confidence 66777666533 466777777541 2223567788999985 9999999995 211 1 1123456
Q ss_pred ccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHhcC--------cccceEEEecCCCCCh--------------
Q 025027 121 EDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLASN--------QDVQAAVLLHPSNVTE-------------- 172 (259)
Q Consensus 121 ~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~--------~~i~~~i~~~~~~~~~-------------- 172 (259)
+|+.++++|+.++ +.++|+|+|+|+||.+++.++.. +.++++++++|.....
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~ 212 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDG 212 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCccc
Confidence 8888999998753 45799999999999999997721 4688899988753210
Q ss_pred -----------------------------hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCc
Q 025027 173 -----------------------------DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCH 223 (259)
Q Consensus 173 -----------------------------~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 223 (259)
.++...-.|+++++|+.|.+. +....+.+.+ .+.|+++++++++|+.|
T Consensus 213 l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L-~~aGv~v~~~~~~g~~H 289 (318)
T PRK10162 213 LTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTL-AAHQQPCEFKLYPGTLH 289 (318)
T ss_pred cCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHH-HHcCCCEEEEEECCCce
Confidence 000012359999999999986 4788899999 55788999999999999
Q ss_pred cccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 224 GWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
+|....... ..+.++++.+.+||++.++
T Consensus 290 ~f~~~~~~~-----~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 290 AFLHYSRMM-----DTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ehhhccCch-----HHHHHHHHHHHHHHHHHhc
Confidence 996543221 4568899999999998875
No 35
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.76 E-value=2.5e-17 Score=132.53 Aligned_cols=168 Identities=18% Similarity=0.301 Sum_probs=111.8
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV 135 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (259)
+|++|++| |+|.....|..+++.|. +||.|+++|++ |++.+.... . ..+.+...+++.++++.+ +.
T Consensus 13 ~~~li~~h-g~~~~~~~~~~~~~~l~-~~~~v~~~d~~-G~G~s~~~~-~-------~~~~~~~~~~~~~~i~~~---~~ 78 (251)
T TIGR02427 13 APVLVFIN-SLGTDLRMWDPVLPALT-PDFRVLRYDKR-GHGLSDAPE-G-------PYSIEDLADDVLALLDHL---GI 78 (251)
T ss_pred CCeEEEEc-CcccchhhHHHHHHHhh-cccEEEEecCC-CCCCCCCCC-C-------CCCHHHHHHHHHHHHHHh---CC
Confidence 34455555 56665567888888886 48999999995 555432211 0 011233334555555544 55
Q ss_pred CcEEEEeechhHHHHHHHh-cC-cccceEEEecCCCC--------------------------------------C----
Q 025027 136 SAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNV--------------------------------------T---- 171 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a-~~-~~i~~~i~~~~~~~--------------------------------------~---- 171 (259)
+++.++|||+||.+++.++ .. .++++++++++... .
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 6899999999999999988 33 36777776543210 0
Q ss_pred ---------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcc
Q 025027 172 ---------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHG 224 (259)
Q Consensus 172 ---------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 224 (259)
...+.++++|+++++|++|..+|.+....+.+.++ ..+++.+++++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~ 233 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-----GARFAEIRGAGHI 233 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-----CceEEEECCCCCc
Confidence 01134568899999999999999988888777762 3478899999997
Q ss_pred ccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 225 WTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
...+ ..+...+.+.+||+
T Consensus 234 ~~~~----------~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 234 PCVE----------QPEAFNAALRDFLR 251 (251)
T ss_pred cccc----------ChHHHHHHHHHHhC
Confidence 6432 23677777777763
No 36
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=2.6e-16 Score=134.60 Aligned_cols=189 Identities=20% Similarity=0.190 Sum_probs=121.5
Q ss_pred eeCCe-eeEEeCCCC-----CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhcc
Q 025027 41 ELGGL-KAYVTGPPH-----SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 114 (259)
Q Consensus 41 ~~~~~-~~~~~~~~~-----~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 114 (259)
..++. +++|..... ..++||++||..+. ...|..+.+.|++ +|.|+++|++ |+|.+....... +
T Consensus 67 ~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~-~~~w~~~~~~L~~-~~~via~Dl~-G~G~S~~~~~~~-------~ 136 (360)
T PLN02679 67 KWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGAS-IPHWRRNIGVLAK-NYTVYAIDLL-GFGASDKPPGFS-------Y 136 (360)
T ss_pred EECCceeEEEEEecCcccCCCCCeEEEECCCCCC-HHHHHHHHHHHhc-CCEEEEECCC-CCCCCCCCCCcc-------c
Confidence 33443 666653221 23678888876655 4578888898876 6999999995 655443211111 1
Q ss_pred CCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhc--Cc-ccceEEEecCCCC---------------------
Q 025027 115 TTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLAS--NQ-DVQAAVLLHPSNV--------------------- 170 (259)
Q Consensus 115 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~--~~-~i~~~i~~~~~~~--------------------- 170 (259)
+.+...+++.++++. .+.+++.|+||||||.+++.++. +| +++++|++++...
T Consensus 137 ~~~~~a~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
T PLN02679 137 TMETWAELILDFLEE---VVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWL 213 (360)
T ss_pred cHHHHHHHHHHHHHH---hcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHH
Confidence 122333444444444 35679999999999999988763 34 7888887663210
Q ss_pred -------C---------------------------------------------------------------hhhhhccCC
Q 025027 171 -------T---------------------------------------------------------------EDEIKAVKV 180 (259)
Q Consensus 171 -------~---------------------------------------------------------------~~~~~~~~~ 180 (259)
. ...+.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 293 (360)
T PLN02679 214 IDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISL 293 (360)
T ss_pred HHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCC
Confidence 0 011334688
Q ss_pred cEEEeecCCCCCCChHHH-HHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 181 PIAVLGAERDNGLPPAQM-KRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 181 Pvl~i~g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
|+|+++|++|.++|++.. ....+.+.... .+.++++++++||.... +..+++.+.+.+||++
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~----------E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHD----------DRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccc----------cCHHHHHHHHHHHHHh
Confidence 999999999999987642 22333332211 25688999999996543 2348899999999986
No 37
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.76 E-value=2.1e-16 Score=129.98 Aligned_cols=174 Identities=17% Similarity=0.242 Sum_probs=115.7
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
+.+++||++||++|....++..+...+.+.||.|+++|++ |++.+....... ...+.+...+++.++++.+
T Consensus 23 ~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~-G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~--- 93 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQL-GCGYSDQPDDSD-----ELWTIDYFVDELEEVREKL--- 93 (288)
T ss_pred CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCC-CCCCCCCCCccc-----ccccHHHHHHHHHHHHHHc---
Confidence 3457899999988877666667777777779999999995 554332211000 0011223334444444433
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC----------------------------------------
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------------------------------------- 171 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~---------------------------------------- 171 (259)
+.++++++|||+||.+++.++ ..| +++++++..+....
T Consensus 94 ~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
T TIGR01250 94 GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAV 173 (288)
T ss_pred CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHH
Confidence 556799999999999999987 444 68888876542110
Q ss_pred --------------------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHH
Q 025027 172 --------------------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRF 201 (259)
Q Consensus 172 --------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~ 201 (259)
...+.++++|+++++|++|.+ +++..+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~ 252 (288)
T TIGR01250 174 EVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREM 252 (288)
T ss_pred HHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHH
Confidence 001235688999999999985 56777777
Q ss_pred HHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 202 DEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
.+.++ ..+++.+++++|....+ ..+++.+.+.+||+
T Consensus 253 ~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 253 QELIA-----GSRLVVFPDGSHMTMIE----------DPEVYFKLLSDFIR 288 (288)
T ss_pred HHhcc-----CCeEEEeCCCCCCcccC----------CHHHHHHHHHHHhC
Confidence 77652 34788999999976542 23778888888874
No 38
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.76 E-value=6.1e-17 Score=129.93 Aligned_cols=161 Identities=16% Similarity=0.203 Sum_probs=115.0
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVS 136 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 136 (259)
++||++||+.+. ...|..+++.|++ +|.|+++|++ |.+.+.... ..++.++++.+.....+
T Consensus 5 ~~iv~~HG~~~~-~~~~~~~~~~l~~-~~~vi~~d~~-G~G~s~~~~----------------~~~~~~~~~~~~~~~~~ 65 (245)
T TIGR01738 5 VHLVLIHGWGMN-AEVFRCLDEELSA-HFTLHLVDLP-GHGRSRGFG----------------PLSLADAAEAIAAQAPD 65 (245)
T ss_pred ceEEEEcCCCCc-hhhHHHHHHhhcc-CeEEEEecCC-cCccCCCCC----------------CcCHHHHHHHHHHhCCC
Confidence 678888875444 4678889999976 5999999995 555432211 02344555555544446
Q ss_pred cEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-------------------------------------------
Q 025027 137 AVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------------------------- 171 (259)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------------------------------------- 171 (259)
+++++||||||.+++.++ .+| +++++|++++....
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT 145 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc
Confidence 899999999999999988 445 58888876542100
Q ss_pred -----------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEE
Q 025027 172 -----------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVK 216 (259)
Q Consensus 172 -----------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 216 (259)
...+.++++|+++++|++|.++|++..+.+.+.++ ..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~ 220 (245)
T TIGR01738 146 ARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-----HSELY 220 (245)
T ss_pred cchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-----CCeEE
Confidence 01235678999999999999999988888877663 45788
Q ss_pred ecCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 025027 217 TYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 217 ~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
++++++|....+ ..+++.+.+.+|+
T Consensus 221 ~~~~~gH~~~~e----------~p~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLS----------HAEAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCcccc----------CHHHHHHHHHhhC
Confidence 999999976442 2377777777774
No 39
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.75 E-value=1.1e-16 Score=139.81 Aligned_cols=187 Identities=17% Similarity=0.195 Sum_probs=121.4
Q ss_pred eeCCeeeEEe--CCCC--CCeeEEEEeccCCCCchhHHH-HHHHHH---hcCCEEEeeccCCCCCCCCCCCCcchhhhhh
Q 025027 41 ELGGLKAYVT--GPPH--SKKAVLMISDIYGDEPPIYRS-VADKVA---GAGFLVVAPDFFHGDAANPSNPKYDKDTWRK 112 (259)
Q Consensus 41 ~~~~~~~~~~--~~~~--~~~~vil~~~~~g~~~~~~~~-~a~~la---~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 112 (259)
..++.++|+. .|+. .+++||++||+.+.. ..|.. +.+.|+ +++|.|+++|++ |+|.+.......
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~-G~G~S~~p~~~~------ 253 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLL-GFGRSPKPADSL------ 253 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCC-CCCCCcCCCCCc------
Confidence 3455677765 3433 236788888876664 34553 445555 468999999995 555443211110
Q ss_pred ccCCCcccccHH-HHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC--C----------------
Q 025027 113 NHTTDKGYEDAK-PVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV--T---------------- 171 (259)
Q Consensus 113 ~~~~~~~~~d~~-~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~--~---------------- 171 (259)
++.+...+++. .+++ ..+.+++.++||||||.+++.++ .+| ++++++++++... +
T Consensus 254 -ytl~~~a~~l~~~ll~---~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN03087 254 -YTLREHLEMIERSVLE---RYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPR 329 (481)
T ss_pred -CCHHHHHHHHHHHHHH---HcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhccc
Confidence 11122223332 3333 33667999999999999999987 444 6888888764210 0
Q ss_pred --------------------h--------------------------h-------------h------------------
Q 025027 172 --------------------E--------------------------D-------------E------------------ 174 (259)
Q Consensus 172 --------------------~--------------------------~-------------~------------------ 174 (259)
. . .
T Consensus 330 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 330 RVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred ccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 0 0 0
Q ss_pred h----hccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHH
Q 025027 175 I----KAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINW 250 (259)
Q Consensus 175 ~----~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~f 250 (259)
+ .++++|+|+++|++|.++|++..+.+.+.++ +.++++++++||....... .+...+.+.+|
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----~a~l~vI~~aGH~~~v~e~---------p~~fa~~L~~F 475 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-----RARVKVIDDKDHITIVVGR---------QKEFARELEEI 475 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----CCEEEEeCCCCCcchhhcC---------HHHHHHHHHHH
Confidence 0 1468899999999999999999999988874 4688999999997542212 36777788887
Q ss_pred HHH
Q 025027 251 FEK 253 (259)
Q Consensus 251 l~~ 253 (259)
.+.
T Consensus 476 ~~~ 478 (481)
T PLN03087 476 WRR 478 (481)
T ss_pred hhc
Confidence 754
No 40
>PLN02578 hydrolase
Probab=99.75 E-value=3.9e-16 Score=133.26 Aligned_cols=182 Identities=14% Similarity=0.157 Sum_probs=122.5
Q ss_pred eeeCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcc
Q 025027 40 TELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 119 (259)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 119 (259)
...++.+.++...+ .+++||++||..+. ...|..+.+.|++ +|.|+++|++ |.|.+..... .++.+..
T Consensus 71 ~~~~~~~i~Y~~~g-~g~~vvliHG~~~~-~~~w~~~~~~l~~-~~~v~~~D~~-G~G~S~~~~~--------~~~~~~~ 138 (354)
T PLN02578 71 WTWRGHKIHYVVQG-EGLPIVLIHGFGAS-AFHWRYNIPELAK-KYKVYALDLL-GFGWSDKALI--------EYDAMVW 138 (354)
T ss_pred EEECCEEEEEEEcC-CCCeEEEECCCCCC-HHHHHHHHHHHhc-CCEEEEECCC-CCCCCCCccc--------ccCHHHH
Confidence 35566666665443 44678888875554 4677888899976 5999999995 6654432211 1111222
Q ss_pred cccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC----------------C----------
Q 025027 120 YEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV----------------T---------- 171 (259)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~----------------~---------- 171 (259)
.+++.++++.+ ..++++++|||+||.+++.++ ..| ++++++++++... .
T Consensus 139 a~~l~~~i~~~---~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (354)
T PLN02578 139 RDQVADFVKEV---VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL 215 (354)
T ss_pred HHHHHHHHHHh---ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH
Confidence 34444444444 456899999999999999988 344 7888887653210 0
Q ss_pred -------------------------------------------------------------------------hhhhhcc
Q 025027 172 -------------------------------------------------------------------------EDEIKAV 178 (259)
Q Consensus 172 -------------------------------------------------------------------------~~~~~~~ 178 (259)
.+.+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 295 (354)
T PLN02578 216 KEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKL 295 (354)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcC
Confidence 0012446
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
++|+++++|++|.++|.+....+.+.++ +.++..++ +||.... +..+++.+.+.+|++
T Consensus 296 ~~PvLiI~G~~D~~v~~~~~~~l~~~~p-----~a~l~~i~-~GH~~~~----------e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 296 SCPLLLLWGDLDPWVGPAKAEKIKAFYP-----DTTLVNLQ-AGHCPHD----------EVPEQVNKALLEWLS 353 (354)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEeC-CCCCccc----------cCHHHHHHHHHHHHh
Confidence 8899999999999999998888888763 33666775 7997643 234788899999985
No 41
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.75 E-value=6.7e-17 Score=120.88 Aligned_cols=180 Identities=19% Similarity=0.251 Sum_probs=129.3
Q ss_pred eeeEEeCCC-CCCeeEEEEecc----CCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcc
Q 025027 45 LKAYVTGPP-HSKKAVLMISDI----YGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 119 (259)
Q Consensus 45 ~~~~~~~~~-~~~~~vil~~~~----~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 119 (259)
++..+..++ ...|..|++|.- ..++......+++.|.+.||.++.+|+ +|.|.+....+..+++
T Consensus 16 le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNf-RgVG~S~G~fD~GiGE---------- 84 (210)
T COG2945 16 LEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNF-RGVGRSQGEFDNGIGE---------- 84 (210)
T ss_pred ceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecc-cccccccCcccCCcch----------
Confidence 444443333 344667777722 223345677899999999999999999 4766666555444443
Q ss_pred cccHHHHHHHHHHcC-CCc-EEEEeechhHHHHHHHh-cCcccceEEEecCCCCChh--hhhccCCcEEEeecCCCCCCC
Q 025027 120 YEDAKPVIAALKAKG-VSA-VGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVTED--EIKAVKVPIAVLGAERDNGLP 194 (259)
Q Consensus 120 ~~d~~~~i~~l~~~~-~~~-i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~~~--~~~~~~~Pvl~i~g~~D~~~~ 194 (259)
.+|+.++++|++.+. ..+ ..+.|||+|+.++..++ +.+.+...++..|.....+ .+....+|.++++|+.|++++
T Consensus 85 ~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs~l~P~P~~~lvi~g~~Ddvv~ 164 (210)
T COG2945 85 LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDADDVVD 164 (210)
T ss_pred HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhhhccCCCCCceeEecChhhhhc
Confidence 389999999999763 333 47899999999999988 5567787888777655322 334457799999999999888
Q ss_pred hHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 195 PAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
.+......+. .+.++++.++++|.|... .....+.+.+||.
T Consensus 165 l~~~l~~~~~------~~~~~i~i~~a~HFF~gK-----------l~~l~~~i~~~l~ 205 (210)
T COG2945 165 LVAVLKWQES------IKITVITIPGADHFFHGK-----------LIELRDTIADFLE 205 (210)
T ss_pred HHHHHHhhcC------CCCceEEecCCCceeccc-----------HHHHHHHHHHHhh
Confidence 7766665554 366888999999988532 3678888888884
No 42
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.75 E-value=9.8e-17 Score=136.79 Aligned_cols=194 Identities=19% Similarity=0.247 Sum_probs=131.1
Q ss_pred ceEe-eeCCeeeEEeCCCC---CCeeEEEEeccCCCC----chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchh
Q 025027 37 GTVT-ELGGLKAYVTGPPH---SKKAVLMISDIYGDE----PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKD 108 (259)
Q Consensus 37 g~~~-~~~~~~~~~~~~~~---~~~~vil~~~~~g~~----~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~ 108 (259)
+.++ ..+.+.++...|.. .+++||++|+..... ......+++.|+++||.|+++|++ |.+.+.. ...
T Consensus 39 ~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~-g~g~s~~--~~~-- 113 (350)
T TIGR01836 39 KEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWG-YPDRADR--YLT-- 113 (350)
T ss_pred CceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCC-CCCHHHh--cCC--
Confidence 4444 55567777776642 235677777643211 112357999999999999999994 4332111 011
Q ss_pred hhhhccCCCccc-ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-------------
Q 025027 109 TWRKNHTTDKGY-EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------- 171 (259)
Q Consensus 109 ~~~~~~~~~~~~-~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------- 171 (259)
.++.. .++.++++++.+. +.+++.++||||||.+++.++ .++ ++++++++++....
T Consensus 114 -------~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~ 186 (350)
T TIGR01836 114 -------LDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARH 186 (350)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccc
Confidence 12222 3578889988765 567999999999999999976 344 68888776542110
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 187 ~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 187 VDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred cCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence
Q ss_pred ------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCc-cccccCCCCChhhhh
Q 025027 172 ------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCH-GWTVRYFVNDTFAVN 238 (259)
Q Consensus 172 ------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H-~~~~~~~~~~~~~~~ 238 (259)
...+.++++|+++++|++|.++|++....+.+.+. +.+++++++++ +| .+.... .
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~---~~~~~~~~~~~-gH~~~~~~~--------~ 334 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVS---SEDYTELSFPG-GHIGIYVSG--------K 334 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcC---CCCeEEEEcCC-CCEEEEECc--------h
Confidence 00123468899999999999999999999988873 23568888885 55 433322 2
Q ss_pred HHHHHHHHHHHHHHHh
Q 025027 239 SAAEAHEDMINWFEKH 254 (259)
Q Consensus 239 ~~~~~~~~~~~fl~~~ 254 (259)
+.+++++.+.+||.++
T Consensus 335 ~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 335 AQKEVPPAIGKWLQAR 350 (350)
T ss_pred hHhhhhHHHHHHHHhC
Confidence 4589999999999863
No 43
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.75 E-value=1.2e-16 Score=133.45 Aligned_cols=190 Identities=19% Similarity=0.215 Sum_probs=119.7
Q ss_pred eeeEEeCCC-CC-C-eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCc----chhhhhh-----
Q 025027 45 LKAYVTGPP-HS-K-KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKY----DKDTWRK----- 112 (259)
Q Consensus 45 ~~~~~~~~~-~~-~-~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~----~~~~~~~----- 112 (259)
+.+++..|. .. + |+||.+||..+.. ..+... -.++..||.|+.+|.+ |.+........ ....+..
T Consensus 69 V~g~l~~P~~~~~~~Pavv~~hGyg~~~-~~~~~~-~~~a~~G~~vl~~d~r-Gqg~~~~d~~~~~~~~~~g~~~~g~~~ 145 (320)
T PF05448_consen 69 VYGWLYRPKNAKGKLPAVVQFHGYGGRS-GDPFDL-LPWAAAGYAVLAMDVR-GQGGRSPDYRGSSGGTLKGHITRGIDD 145 (320)
T ss_dssp EEEEEEEES-SSSSEEEEEEE--TT--G-GGHHHH-HHHHHTT-EEEEE--T-TTSSSS-B-SSBSSS-SSSSTTTTTTS
T ss_pred EEEEEEecCCCCCCcCEEEEecCCCCCC-CCcccc-cccccCCeEEEEecCC-CCCCCCCCccccCCCCCccHHhcCccC
Confidence 778888777 22 2 5566666554443 333333 3488999999999995 44411111000 0000100
Q ss_pred ---ccCCCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC--------------
Q 025027 113 ---NHTTDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT-------------- 171 (259)
Q Consensus 113 ---~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~-------------- 171 (259)
..-+...+.|...+++++.++ |.++|++.|.|+||.+++.++ .+++|+++++..|++..
T Consensus 146 ~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~~~~~y 225 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRADEGPY 225 (320)
T ss_dssp -TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT--STTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCCccccH
Confidence 000123446788889999876 567999999999999999977 78899999999887543
Q ss_pred -----------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCC
Q 025027 172 -----------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVC 222 (259)
Q Consensus 172 -----------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 222 (259)
.....+|++|+++..|-.|.++||...-..++.++. ++++.+||..+
T Consensus 226 ~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~----~K~l~vyp~~~ 301 (320)
T PF05448_consen 226 PEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG----PKELVVYPEYG 301 (320)
T ss_dssp HHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S----SEEEEEETT--
T ss_pred HHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC----CeeEEeccCcC
Confidence 112467899999999999999999999999999842 57999999999
Q ss_pred ccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 223 HGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 223 H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
|... .+...++.++||+++
T Consensus 302 He~~-------------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 302 HEYG-------------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp SSTT-------------HHHHHHHHHHHHHH-
T ss_pred CCch-------------hhHHHHHHHHHHhcC
Confidence 9652 144488999999875
No 44
>PLN02511 hydrolase
Probab=99.74 E-value=1.5e-16 Score=137.08 Aligned_cols=184 Identities=18% Similarity=0.163 Sum_probs=121.4
Q ss_pred CCeeEEEEeccCCCCch-hHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 55 SKKAVLMISDIYGDEPP-IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~-~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
.+|.||++||+.|.... ++..++..+.++||.|+++|+| |++.++...... ......+|+.++++++...
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~r-G~G~s~~~~~~~--------~~~~~~~Dl~~~i~~l~~~ 169 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSR-GCADSPVTTPQF--------YSASFTGDLRQVVDHVAGR 169 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecC-CCCCCCCCCcCE--------EcCCchHHHHHHHHHHHHH
Confidence 34678888888776543 4567888888999999999995 655443211100 1134567999999999875
Q ss_pred -CCCcEEEEeechhHHHHHHHh-cCc-c--cceEEEecCCCCC-------------------------------------
Q 025027 134 -GVSAVGAAGFCWGGKVAVKLA-SNQ-D--VQAAVLLHPSNVT------------------------------------- 171 (259)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a-~~~-~--i~~~i~~~~~~~~------------------------------------- 171 (259)
+..++.++|||+||.+++.++ .++ + +++++++++....
T Consensus 170 ~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~ 249 (388)
T PLN02511 170 YPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGL 249 (388)
T ss_pred CCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 445899999999999999977 333 3 7777765432110
Q ss_pred -----------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHH-HHHHHHhcCC
Q 025027 172 -----------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMK-RFDEILSAKP 209 (259)
Q Consensus 172 -----------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~-~~~~~l~~~~ 209 (259)
...+.+|++|+|+++|++|+++|.+... ...+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~---- 325 (388)
T PLN02511 250 GGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN---- 325 (388)
T ss_pred CCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC----
Confidence 0123457899999999999999876542 233322
Q ss_pred CCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 210 KFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 210 ~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
...++.+++++||.-..+..... .......+.+.+||+....
T Consensus 326 -p~~~l~~~~~gGH~~~~E~p~~~----~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 326 -PNCLLIVTPSGGHLGWVAGPEAP----FGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred -CCEEEEECCCcceeccccCCCCC----CCCccHHHHHHHHHHHHHH
Confidence 25688999999995543322100 0012356778888876543
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.74 E-value=2.5e-16 Score=132.84 Aligned_cols=182 Identities=16% Similarity=0.217 Sum_probs=122.5
Q ss_pred CeeEEEEeccCCCCc-hhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-
Q 025027 56 KKAVLMISDIYGDEP-PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK- 133 (259)
Q Consensus 56 ~~~vil~~~~~g~~~-~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~- 133 (259)
+|.||++||..|... .++..+++.|+++||.|+++|++ |++..+...... + .....+|+..+++++++.
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~r-G~g~~~~~~~~~-------~-~~~~~~D~~~~i~~l~~~~ 128 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFR-GCSGEPNRLHRI-------Y-HSGETEDARFFLRWLQREF 128 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCC-CCCCCccCCcce-------E-CCCchHHHHHHHHHHHHhC
Confidence 467888887766533 34567899999999999999995 554332211110 0 112357899999999875
Q ss_pred CCCcEEEEeechhHHHHHHHh-cC-c--ccceEEEecCCCCC--------------------------------------
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SN-Q--DVQAAVLLHPSNVT-------------------------------------- 171 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~-~--~i~~~i~~~~~~~~-------------------------------------- 171 (259)
+..+++++||||||.++..++ .. + .+++++++++....
T Consensus 129 ~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 208 (324)
T PRK10985 129 GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTL 208 (324)
T ss_pred CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 567899999999999877755 32 2 37887776654210
Q ss_pred ---------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCC
Q 025027 172 ---------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFD 212 (259)
Q Consensus 172 ---------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~ 212 (259)
...+.++++|+++++|++|.+++++....+.+.. + .
T Consensus 209 ~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~---~--~ 283 (324)
T PRK10985 209 PINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP---P--N 283 (324)
T ss_pred cCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC---C--C
Confidence 1234667889999999999999987776654432 1 4
Q ss_pred ceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 213 HLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 213 ~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
.++.+.+++||.-..+..... ...-..+.+.+||+....
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~-----~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLK-----PQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred eEEEECCCCCceeeCCCCCCC-----CCccHHHHHHHHHHHhhc
Confidence 677888999996544432100 013566678888876543
No 46
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.74 E-value=5.3e-16 Score=128.68 Aligned_cols=187 Identities=16% Similarity=0.216 Sum_probs=122.0
Q ss_pred CCceEeeeCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhcc
Q 025027 35 GAGTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 114 (259)
Q Consensus 35 ~~g~~~~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 114 (259)
..+.+.+.++.+.++.... .+++||++||.... ...|..+.+.|.+ +|.|+++|++ |.|.+.......
T Consensus 14 ~~~~~~~~~~~~i~y~~~G-~~~~iv~lHG~~~~-~~~~~~~~~~l~~-~~~vi~~D~~-G~G~S~~~~~~~-------- 81 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEG-TGPPILLCHGNPTW-SFLYRDIIVALRD-RFRCVAPDYL-GFGLSERPSGFG-------- 81 (286)
T ss_pred ccceEEEcCCcEEEEEECC-CCCEEEEECCCCcc-HHHHHHHHHHHhC-CcEEEEECCC-CCCCCCCCCccc--------
Confidence 4556677788777765433 35678888876544 3567888888876 5999999995 555432211101
Q ss_pred CCCcccccHHHHHHHH-HHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC--------------------
Q 025027 115 TTDKGYEDAKPVIAAL-KAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-------------------- 171 (259)
Q Consensus 115 ~~~~~~~d~~~~i~~l-~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~-------------------- 171 (259)
...++..+.+..+ ...+.++++++||||||.+++.++ .+| +++++|+.++....
T Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (286)
T PRK03204 82 ---YQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQY 158 (286)
T ss_pred ---cCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchh
Confidence 1112333333333 223667899999999999999988 333 78888875432100
Q ss_pred --------------------h------------------h--------------hhhc---------cCCcEEEeecCCC
Q 025027 172 --------------------E------------------D--------------EIKA---------VKVPIAVLGAERD 190 (259)
Q Consensus 172 --------------------~------------------~--------------~~~~---------~~~Pvl~i~g~~D 190 (259)
. . .... +++|+++++|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D 238 (286)
T PRK03204 159 AILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKD 238 (286)
T ss_pred hhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCC
Confidence 0 0 0000 1799999999999
Q ss_pred CCCChH-HHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 025027 191 NGLPPA-QMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 191 ~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
.++++. ..+.+.+.++ ..++++++++||....+ ..+++.+.+.+||
T Consensus 239 ~~~~~~~~~~~~~~~ip-----~~~~~~i~~aGH~~~~e----------~Pe~~~~~i~~~~ 285 (286)
T PRK03204 239 VAFRPKTILPRLRATFP-----DHVLVELPNAKHFIQED----------APDRIAAAIIERF 285 (286)
T ss_pred cccCcHHHHHHHHHhcC-----CCeEEEcCCCccccccc----------CHHHHHHHHHHhc
Confidence 988654 4566777663 45888999999976442 3478888888886
No 47
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.74 E-value=3.9e-16 Score=128.69 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=83.4
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh-----------------hh---------h--hccCCcEE
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE-----------------DE---------I--KAVKVPIA 183 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~-----------------~~---------~--~~~~~Pvl 183 (259)
+.++++++||||||.+++.++ .+| .++++++++|..... .. . .....|++
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~pll 215 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTIL 215 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCee
Confidence 567999999999999999988 444 788898877753210 00 0 12457999
Q ss_pred EeecCCCCCCCh-HHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 184 VLGAERDNGLPP-AQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 184 ~i~g~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+.+|+.|..+|. .....+.+.++ +.++++++..+||++|+|. ......++.++|+.++
T Consensus 216 i~~G~~D~~v~~~~~~~~~~~~l~-~~g~~v~~~~~~g~~H~f~------------~~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 216 IDQGTADQFLDEQLRPDAFEQACR-AAGQALTLRRQAGYDHSYY------------FIASFIADHLRHHAER 274 (275)
T ss_pred EeecCCCcccCccccHHHHHHHHH-HcCCCeEEEEeCCCCccch------------hHHHhHHHHHHHHHhh
Confidence 999999999998 57778888884 4677899999999999993 3477778888888765
No 48
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.74 E-value=1.6e-16 Score=124.67 Aligned_cols=184 Identities=18% Similarity=0.151 Sum_probs=131.3
Q ss_pred eeeEEeCCCCC-CeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccccc
Q 025027 45 LKAYVTGPPHS-KKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 122 (259)
Q Consensus 45 ~~~~~~~~~~~-~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 122 (259)
+...+..|+.. .+.+|+.||--.+ -.....+...|..+ +++++.+||+ |.|.+...+.+ ....+|
T Consensus 48 ~~~~y~~~~~~~~~~lly~hGNa~D-lgq~~~~~~~l~~~ln~nv~~~DYS-GyG~S~G~psE-----------~n~y~D 114 (258)
T KOG1552|consen 48 IVCMYVRPPEAAHPTLLYSHGNAAD-LGQMVELFKELSIFLNCNVVSYDYS-GYGRSSGKPSE-----------RNLYAD 114 (258)
T ss_pred EEEEEEcCccccceEEEEcCCcccc-hHHHHHHHHHHhhcccceEEEEecc-cccccCCCccc-----------ccchhh
Confidence 44455555443 4566666665333 23455566666664 8999999994 55544332211 234589
Q ss_pred HHHHHHHHHHcC--CCcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC-------------------hhhhhccCCc
Q 025027 123 AKPVIAALKAKG--VSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-------------------EDEIKAVKVP 181 (259)
Q Consensus 123 ~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~-------------------~~~~~~~~~P 181 (259)
++++.++|+... .++|+|+|+|+|...++.+|....+.++|+.+|.... .+..+.+++|
T Consensus 115 i~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~P 194 (258)
T KOG1552|consen 115 IKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCP 194 (258)
T ss_pred HHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCCcceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCC
Confidence 999999999873 5799999999999999998844339999998876421 3456778999
Q ss_pred EEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 182 IAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 182 vl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
+|++||+.|+++|.....++.+..+. +++-.+..|++|..... ..+..+.+..|+.....
T Consensus 195 VLiiHgtdDevv~~sHg~~Lye~~k~----~~epl~v~g~gH~~~~~-----------~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 195 VLIIHGTDDEVVDFSHGKALYERCKE----KVEPLWVKGAGHNDIEL-----------YPEYIEHLRRFISSVLP 254 (258)
T ss_pred EEEEecccCceecccccHHHHHhccc----cCCCcEEecCCCccccc-----------CHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999843 45666778889966432 25677788888765443
No 49
>PRK07581 hypothetical protein; Validated
Probab=99.73 E-value=1.3e-16 Score=135.52 Aligned_cols=198 Identities=10% Similarity=0.125 Sum_probs=123.5
Q ss_pred eeCCeeeEEeCCCC---CCeeEEEEeccCCCCchhHHHHH---HHHHhcCCEEEeeccCCCCCCCCCCCC--cchhhhhh
Q 025027 41 ELGGLKAYVTGPPH---SKKAVLMISDIYGDEPPIYRSVA---DKVAGAGFLVVAPDFFHGDAANPSNPK--YDKDTWRK 112 (259)
Q Consensus 41 ~~~~~~~~~~~~~~---~~~~vil~~~~~g~~~~~~~~~a---~~la~~G~~v~~~d~~~g~~~~~~~~~--~~~~~~~~ 112 (259)
+++++++++..... .++++|++||+++.+...+..+. +.|...+|.|+++|++ |+|.+..... ..+. +.
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~-G~G~S~~~~~~~~~~~--~~ 98 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMF-GNGLSSSPSNTPAPFN--AA 98 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCC-CCCCCCCCCCCCCCCC--CC
Confidence 44666666653221 23456777777775433443332 4676678999999995 5554322110 0000 00
Q ss_pred ccCCCcccccHHHHHHHHH-HcCCCc-EEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC------------------
Q 025027 113 NHTTDKGYEDAKPVIAALK-AKGVSA-VGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV------------------ 170 (259)
Q Consensus 113 ~~~~~~~~~d~~~~i~~l~-~~~~~~-i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~------------------ 170 (259)
.+......+++.+....+. ..+.++ .+|+||||||.+++.++ .+| +++++|++++...
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 99 RFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred CCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 0001112345555344343 347778 47999999999999988 555 6777776632100
Q ss_pred -----------------------------------------------C--------------------------------
Q 025027 171 -----------------------------------------------T-------------------------------- 171 (259)
Q Consensus 171 -----------------------------------------------~-------------------------------- 171 (259)
.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 0
Q ss_pred ---------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCC-CCccccccCCCCChhhhhHHH
Q 025027 172 ---------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPG-VCHGWTVRYFVNDTFAVNSAA 241 (259)
Q Consensus 172 ---------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~ 241 (259)
...+.++++|+|+++|++|.++|++....+.+.++ ..++.++++ +||....+ ..+
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----~a~l~~i~~~~GH~~~~~----------~~~ 323 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-----NAELRPIESIWGHLAGFG----------QNP 323 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEeCCCCCcccccc----------CcH
Confidence 00122368899999999999999998888888773 357888998 89965432 236
Q ss_pred HHHHHHHHHHHHhhh
Q 025027 242 EAHEDMINWFEKHVK 256 (259)
Q Consensus 242 ~~~~~~~~fl~~~~~ 256 (259)
++...+.+||++.+.
T Consensus 324 ~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 324 ADIAFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHHHHh
Confidence 788999999998763
No 50
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.73 E-value=5.6e-17 Score=137.90 Aligned_cols=186 Identities=16% Similarity=0.231 Sum_probs=125.7
Q ss_pred eeCCeeeEEeCCCCCCeeEEEEeccCCCCch-----------hHHHHHH---HHHhcCCEEEeeccCCCCCCCCCCCCcc
Q 025027 41 ELGGLKAYVTGPPHSKKAVLMISDIYGDEPP-----------IYRSVAD---KVAGAGFLVVAPDFFHGDAANPSNPKYD 106 (259)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~-----------~~~~~a~---~la~~G~~v~~~d~~~g~~~~~~~~~~~ 106 (259)
..+++++++......++++|++||+++.... +|..+.. .|..++|.|+++|++ |++.+... .
T Consensus 42 ~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~-G~g~s~~~---~ 117 (343)
T PRK08775 42 GLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFI-GADGSLDV---P 117 (343)
T ss_pred CCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCC-CCCCCCCC---C
Confidence 4467777776543234468999998887643 5666665 565457999999996 55433211 1
Q ss_pred hhhhhhccCCCcccccHHHHHHHHHHcCCCc-EEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC------------
Q 025027 107 KDTWRKNHTTDKGYEDAKPVIAALKAKGVSA-VGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------ 171 (259)
Q Consensus 107 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------ 171 (259)
...+...+|+.++++.+ +.++ ++++||||||.+++.++ .+| +++++|++++....
T Consensus 118 -------~~~~~~a~dl~~ll~~l---~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~ 187 (343)
T PRK08775 118 -------IDTADQADAIALLLDAL---GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQR 187 (343)
T ss_pred -------CCHHHHHHHHHHHHHHc---CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHH
Confidence 11223345555555554 5545 57999999999999988 444 67777776532100
Q ss_pred ----------------------------------------h---------------------------------------
Q 025027 172 ----------------------------------------E--------------------------------------- 172 (259)
Q Consensus 172 ----------------------------------------~--------------------------------------- 172 (259)
.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T PRK08775 188 RAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID 267 (343)
T ss_pred HHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh
Confidence 0
Q ss_pred ---hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCC-CCccccccCCCCChhhhhHHHHHHHHHH
Q 025027 173 ---DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPG-VCHGWTVRYFVNDTFAVNSAAEAHEDMI 248 (259)
Q Consensus 173 ---~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (259)
..+.++++|+|+++|++|.++|++....+.+.+.. ..++.++++ +||....+ ..+.+.+.+.
T Consensus 268 ~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p----~a~l~~i~~~aGH~~~lE----------~Pe~~~~~l~ 333 (343)
T PRK08775 268 LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP----RGSLRVLRSPYGHDAFLK----------ETDRIDAILT 333 (343)
T ss_pred hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC----CCeEEEEeCCccHHHHhc----------CHHHHHHHHH
Confidence 01234678999999999999999888888887621 357888874 89977542 3478999999
Q ss_pred HHHHHh
Q 025027 249 NWFEKH 254 (259)
Q Consensus 249 ~fl~~~ 254 (259)
+||++.
T Consensus 334 ~FL~~~ 339 (343)
T PRK08775 334 TALRST 339 (343)
T ss_pred HHHHhc
Confidence 999864
No 51
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.72 E-value=6.8e-16 Score=124.64 Aligned_cols=160 Identities=12% Similarity=0.171 Sum_probs=107.2
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVS 136 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 136 (259)
|+||++||..+.. ..|..+++.| + +|.|+++|++ |+|.+...... +.+...+++.++++ ..+.+
T Consensus 3 p~vvllHG~~~~~-~~w~~~~~~l-~-~~~vi~~D~~-G~G~S~~~~~~---------~~~~~~~~l~~~l~---~~~~~ 66 (242)
T PRK11126 3 PWLVFLHGLLGSG-QDWQPVGEAL-P-DYPRLYIDLP-GHGGSAAISVD---------GFADVSRLLSQTLQ---SYNIL 66 (242)
T ss_pred CEEEEECCCCCCh-HHHHHHHHHc-C-CCCEEEecCC-CCCCCCCcccc---------CHHHHHHHHHHHHH---HcCCC
Confidence 5688888877665 5788899988 3 6999999995 55443221111 12223344444444 33667
Q ss_pred cEEEEeechhHHHHHHHh-cC-cc-cceEEEecCCCC--C----------------------------------------
Q 025027 137 AVGAAGFCWGGKVAVKLA-SN-QD-VQAAVLLHPSNV--T---------------------------------------- 171 (259)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a-~~-~~-i~~~i~~~~~~~--~---------------------------------------- 171 (259)
+++++||||||.+++.++ .. ++ ++++++.++... .
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLN 146 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccC
Confidence 999999999999999988 33 44 999887653310 0
Q ss_pred ----------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEe
Q 025027 172 ----------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKT 217 (259)
Q Consensus 172 ----------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 217 (259)
...+.++++|+++++|++|..+. .+.+.. ..++..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~------~~~~~~ 215 (242)
T PRK11126 147 AEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL------ALPLHV 215 (242)
T ss_pred ccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh------cCeEEE
Confidence 01234568899999999998542 222221 458889
Q ss_pred cCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 218 YPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 218 ~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
++++||.+..+ ..+++.+.+.+||++
T Consensus 216 i~~~gH~~~~e----------~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHRE----------NPAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhh----------ChHHHHHHHHHHHhh
Confidence 99999976432 347888889999864
No 52
>PLN02872 triacylglycerol lipase
Probab=99.71 E-value=1.1e-16 Score=137.36 Aligned_cols=203 Identities=15% Similarity=0.128 Sum_probs=129.5
Q ss_pred EeeeCCeeeEEeC-C-C------CCCeeEEEEeccCCCCchh-----HHHHHHHHHhcCCEEEeeccCCCCCCCCCCC--
Q 025027 39 VTELGGLKAYVTG-P-P------HSKKAVLMISDIYGDEPPI-----YRSVADKVAGAGFLVVAPDFFHGDAANPSNP-- 103 (259)
Q Consensus 39 ~~~~~~~~~~~~~-~-~------~~~~~vil~~~~~g~~~~~-----~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~-- 103 (259)
+++-||..+.+.+ | . ..+++|+++||..+....+ ...++..|+++||.|+++|.| |.+.+....
T Consensus 49 v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~R-G~~~s~gh~~~ 127 (395)
T PLN02872 49 IQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVR-GTRWSYGHVTL 127 (395)
T ss_pred EECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccc-ccccccCCCCC
Confidence 4456775555433 2 1 1246788888876543221 245788899999999999996 432211100
Q ss_pred -CcchhhhhhccCCCccc-ccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcCc----ccceEEEecCCCC-------
Q 025027 104 -KYDKDTWRKNHTTDKGY-EDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSNV------- 170 (259)
Q Consensus 104 -~~~~~~~~~~~~~~~~~-~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~i~~~~~~~------- 170 (259)
..+...| ..+.++.. .|+.++++++.+...+++.++||||||.+++.++.+| +++.+++++|...
T Consensus 128 ~~~~~~fw--~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~~~~~~~ 205 (395)
T PLN02872 128 SEKDKEFW--DWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYLDHVTAP 205 (395)
T ss_pred Cccchhcc--CCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhhccCCCH
Confidence 0010111 12233333 7999999999766557999999999999998655332 2333332222100
Q ss_pred -------------------------------------------------------C------------------------
Q 025027 171 -------------------------------------------------------T------------------------ 171 (259)
Q Consensus 171 -------------------------------------------------------~------------------------ 171 (259)
.
T Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H 285 (395)
T PLN02872 206 LVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRH 285 (395)
T ss_pred HHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHH
Confidence 0
Q ss_pred ------------------------------hhhhhcc--CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecC
Q 025027 172 ------------------------------EDEIKAV--KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYP 219 (259)
Q Consensus 172 ------------------------------~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 219 (259)
.-++.++ ++|+++++|++|.+++++....+.+.++. ..++..++
T Consensus 286 ~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----~~~l~~l~ 361 (395)
T PLN02872 286 LFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS----KPELLYLE 361 (395)
T ss_pred HHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC----ccEEEEcC
Confidence 0134555 57999999999999999999999988742 24678899
Q ss_pred CCCcc--ccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 220 GVCHG--WTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 220 g~~H~--~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
+.+|. +..+ ++.+.+++.+++||++....
T Consensus 362 ~~gH~dfi~~~---------eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 362 NYGHIDFLLST---------SAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CCCCHHHHhCc---------chHHHHHHHHHHHHHHhhhc
Confidence 99995 2221 24588999999999987653
No 53
>COG0400 Predicted esterase [General function prediction only]
Probab=99.71 E-value=3.5e-16 Score=121.87 Aligned_cols=106 Identities=21% Similarity=0.203 Sum_probs=87.9
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCChh--hhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCC
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTED--EIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKP 209 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~~--~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~ 209 (259)
+.++++++|||+||++++.+. ..+ .++++++++|...... .......|+|++||+.|+++|...+.++.+.+ .+.
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l-~~~ 175 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLALAEALAEYL-TAS 175 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHHHHHHHHHH-HHc
Confidence 557999999999999999987 444 7999999999775543 22344789999999999999999999999999 447
Q ss_pred CCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 210 KFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 210 ~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
|.+++..+++ +||.+. .+..+.+.+|+.+..
T Consensus 176 g~~v~~~~~~-~GH~i~--------------~e~~~~~~~wl~~~~ 206 (207)
T COG0400 176 GADVEVRWHE-GGHEIP--------------PEELEAARSWLANTL 206 (207)
T ss_pred CCCEEEEEec-CCCcCC--------------HHHHHHHHHHHHhcc
Confidence 8899999999 699873 567778888988753
No 54
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.71 E-value=4.9e-16 Score=124.77 Aligned_cols=168 Identities=17% Similarity=0.296 Sum_probs=108.1
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH-HcCC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK-AKGV 135 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~-~~~~ 135 (259)
|+||++||..+.. ..|..+++.|+ +||.|+++|++ |++.+....... ..+.+ +.+..++..+. ..+.
T Consensus 2 ~~vv~~hG~~~~~-~~~~~~~~~L~-~~~~v~~~d~~-g~G~s~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLGSG-ADWQALIELLG-PHFRCLAIDLP-GHGSSQSPDEIE------RYDFE---EAAQDILATLLDQLGI 69 (251)
T ss_pred CEEEEEcCCCCch-hhHHHHHHHhc-ccCeEEEEcCC-CCCCCCCCCccC------hhhHH---HHHHHHHHHHHHHcCC
Confidence 5688888876665 57899999998 79999999995 554432211100 00011 11222233332 2356
Q ss_pred CcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC------------------------------------------
Q 025027 136 SAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------------------------ 171 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------------------------------------ 171 (259)
+++.++|||+||.+++.++ ..+ .++++++.++....
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQK 149 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecc
Confidence 7999999999999999988 444 67888876643210
Q ss_pred -------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCce
Q 025027 172 -------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHL 214 (259)
Q Consensus 172 -------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 214 (259)
...+..+++|+++++|++|..++ +..+.+.+.+ ...+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-----~~~~ 223 (251)
T TIGR03695 150 NLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-----PNLT 223 (251)
T ss_pred cCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-----CCCc
Confidence 00123578899999999998763 3344443332 2567
Q ss_pred EEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 215 VKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 215 ~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
+..+++++|....+ ..+++.+.+.+||+
T Consensus 224 ~~~~~~~gH~~~~e----------~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 224 LVIIANAGHNIHLE----------NPEAFAKILLAFLE 251 (251)
T ss_pred EEEEcCCCCCcCcc----------ChHHHHHHHHHHhC
Confidence 88999999976442 12678888888873
No 55
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.71 E-value=7e-16 Score=132.44 Aligned_cols=185 Identities=22% Similarity=0.307 Sum_probs=119.4
Q ss_pred ceEeeeCCeeeEEeCCC-CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccC
Q 025027 37 GTVTELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 115 (259)
Q Consensus 37 g~~~~~~~~~~~~~~~~-~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 115 (259)
+.....++..+++.... ...++||++||+.+.. ..|..+.+.|.+. |.|+++|++ |++.+...... .+
T Consensus 111 ~~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~-~~v~~~d~~-g~G~s~~~~~~--------~~ 179 (371)
T PRK14875 111 PRKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDL-NNWLFNHAALAAG-RPVIALDLP-GHGASSKAVGA--------GS 179 (371)
T ss_pred CCcceEcCcEEEEecccCCCCCeEEEECCCCCcc-chHHHHHHHHhcC-CEEEEEcCC-CCCCCCCCCCC--------CC
Confidence 34445555555444332 3346788888655554 5778888888775 999999994 55543221100 01
Q ss_pred CCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC----------------------
Q 025027 116 TDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------------------- 171 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~---------------------- 171 (259)
.+...+++ .+.+...+..+++++|||+||.+++.++ .++ +++++++++|....
T Consensus 180 ~~~~~~~~---~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (371)
T PRK14875 180 LDELAAAV---LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKP 256 (371)
T ss_pred HHHHHHHH---HHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHH
Confidence 11222222 3333334667899999999999999987 444 79999887754100
Q ss_pred --------------------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHH
Q 025027 172 --------------------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRF 201 (259)
Q Consensus 172 --------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~ 201 (259)
...+.++++|+|+++|++|.++|++....+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l 336 (371)
T PRK14875 257 VLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL 336 (371)
T ss_pred HHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc
Confidence 002345789999999999999997765432
Q ss_pred HHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 202 DEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
.. ..++..+++++|....+ ..+++.+.+.+||++
T Consensus 337 ~~--------~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 337 PD--------GVAVHVLPGAGHMPQME----------AAADVNRLLAEFLGK 370 (371)
T ss_pred cC--------CCeEEEeCCCCCChhhh----------CHHHHHHHHHHHhcc
Confidence 11 45788999999966432 236777788888865
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.71 E-value=4.8e-16 Score=120.98 Aligned_cols=152 Identities=14% Similarity=0.151 Sum_probs=103.0
Q ss_pred eeEEEEeccCCCCchhHH-HHHHHHHhc--CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 57 KAVLMISDIYGDEPPIYR-SVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~-~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
|+||++||..++...+.. .+.+.++++ +|.|+++|++ |.+ ++..+++.+++ ...
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~-g~~-------------------~~~~~~l~~l~---~~~ 58 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP-PYP-------------------ADAAELLESLV---LEH 58 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC-CCH-------------------HHHHHHHHHHH---HHc
Confidence 468888887776543322 355666654 7999999994 432 01112233333 333
Q ss_pred CCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC-----------------------hh--------hhh--ccCC
Q 025027 134 GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-----------------------ED--------EIK--AVKV 180 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~-----------------------~~--------~~~--~~~~ 180 (259)
+.++++++|||+||.+++.++.....+ +|+++|...+ .. +.. ....
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~ 137 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFMLP-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPD 137 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCCC-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChh
Confidence 567899999999999999988443234 4666665431 00 111 1456
Q ss_pred cEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 181 PIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 181 Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
|+++++|++|+++|++.+..+++.. ....++|++|.|.. .++.++.+.+||+
T Consensus 138 ~v~iihg~~De~V~~~~a~~~~~~~--------~~~~~~ggdH~f~~------------~~~~~~~i~~fl~ 189 (190)
T PRK11071 138 LIWLLQQTGDEVLDYRQAVAYYAAC--------RQTVEEGGNHAFVG------------FERYFNQIVDFLG 189 (190)
T ss_pred hEEEEEeCCCCcCCHHHHHHHHHhc--------ceEEECCCCcchhh------------HHHhHHHHHHHhc
Confidence 7899999999999999999998854 35577999999932 3789999999975
No 57
>PLN02442 S-formylglutathione hydrolase
Probab=99.71 E-value=1.6e-15 Score=125.42 Aligned_cols=180 Identities=17% Similarity=0.207 Sum_probs=109.6
Q ss_pred CeeeEEeCCC----CCCeeEEEEeccCCCCchhH---HHHHHHHHhcCCEEEeeccC-CCCCCCCCC------CCcc-h-
Q 025027 44 GLKAYVTGPP----HSKKAVLMISDIYGDEPPIY---RSVADKVAGAGFLVVAPDFF-HGDAANPSN------PKYD-K- 107 (259)
Q Consensus 44 ~~~~~~~~~~----~~~~~vil~~~~~g~~~~~~---~~~a~~la~~G~~v~~~d~~-~g~~~~~~~------~~~~-~- 107 (259)
.++.++..|+ .+.|.|+++||+.+... .+ ..+.+.++..||.|+++|.. +|....... .... +
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~ 109 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYL 109 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceee
Confidence 3666666554 23466777777665542 33 22446677779999999974 221100000 0000 0
Q ss_pred ----hhhhhccCCCcccccHHHHHHHHH-HcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh--------
Q 025027 108 ----DTWRKNHTTDKGYEDAKPVIAALK-AKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE-------- 172 (259)
Q Consensus 108 ----~~~~~~~~~~~~~~d~~~~i~~l~-~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~-------- 172 (259)
..|......+...+++...++... ..+.++++|+||||||.+++.++ .+| .++++++++|.....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 189 (283)
T PLN02442 110 NATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKA 189 (283)
T ss_pred ccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHH
Confidence 000000000112233444444432 23678999999999999999988 444 688888888764210
Q ss_pred ---------------------hhhhccCCcEEEeecCCCCCCChH-HHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 173 ---------------------DEIKAVKVPIAVLGAERDNGLPPA-QMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 173 ---------------------~~~~~~~~Pvl~i~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
......++|+++++|++|.+++.. ..+.+.+.++ +.+.++++++++|.+|.+
T Consensus 190 ~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~-~~g~~~~~~~~pg~~H~~ 263 (283)
T PLN02442 190 FTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACK-EAGAPVTLRLQPGYDHSY 263 (283)
T ss_pred HHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHH-HcCCCeEEEEeCCCCccH
Confidence 011235789999999999998863 4677778874 456689999999999987
No 58
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.71 E-value=2.6e-16 Score=132.83 Aligned_cols=180 Identities=21% Similarity=0.358 Sum_probs=113.6
Q ss_pred eeeEEeCCCCCC-eeEEEEeccCC-CCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccccc
Q 025027 45 LKAYVTGPPHSK-KAVLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 122 (259)
Q Consensus 45 ~~~~~~~~~~~~-~~vil~~~~~g-~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 122 (259)
+.+|+..|+..+ .|+|++.+|.. ...+.+..+.++|+++|+.++++|+ .|.|.+.... -. ++.-.-
T Consensus 177 I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDm-PG~G~s~~~~--------l~---~D~~~l 244 (411)
T PF06500_consen 177 IPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDM-PGQGESPKWP--------LT---QDSSRL 244 (411)
T ss_dssp EEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE---TTSGGGTTT---------S----S-CCHH
T ss_pred EEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEcc-CCCcccccCC--------CC---cCHHHH
Confidence 888888776433 34555555444 4444455566789999999999999 5665432210 00 111234
Q ss_pred HHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh--cCcccceEEEecCCCCC--------------------------
Q 025027 123 AKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA--SNQDVQAAVLLHPSNVT-------------------------- 171 (259)
Q Consensus 123 ~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a--~~~~i~~~i~~~~~~~~-------------------------- 171 (259)
..+++++|.+. |..||+++|+|+||+.+.++| .+++++++|+..|....
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~ 324 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRLGMA 324 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHCT-S
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHhCCc
Confidence 66889999876 567999999999999999988 45799999998876332
Q ss_pred ------------------hhhh--hccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCC-CCccccccCC
Q 025027 172 ------------------EDEI--KAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPG-VCHGWTVRYF 230 (259)
Q Consensus 172 ------------------~~~~--~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~ 230 (259)
...+ .+.++|+|.+.+++|.++|.++...++.. ...| +...++. .-|
T Consensus 325 ~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~--s~~g---k~~~~~~~~~~------- 392 (411)
T PF06500_consen 325 AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES--STDG---KALRIPSKPLH------- 392 (411)
T ss_dssp CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT--BTT----EEEEE-SSSHH-------
T ss_pred cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc--CCCC---ceeecCCCccc-------
Confidence 1112 44577999999999999999998887764 3333 3444442 224
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 231 VNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
...++....+.+||++.+
T Consensus 393 -------~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 393 -------MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH
T ss_pred -------cchHHHHHHHHHHHHHhc
Confidence 234899999999999865
No 59
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.70 E-value=2.5e-15 Score=123.78 Aligned_cols=168 Identities=19% Similarity=0.166 Sum_probs=112.6
Q ss_pred eCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccc
Q 025027 42 LGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 121 (259)
Q Consensus 42 ~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (259)
.+|-+..+.+|.+.+|+||++||.++.. ..|..+++.|.++||.|+++|++ |++.+....... .+.+ .
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~-g~G~s~~~~~~~-------~~~~---~ 71 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLK-SAGIDQSDADSV-------TTFD---E 71 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEeccc-CCCCCCCCcccC-------CCHH---H
Confidence 3555666666656667899999877765 47899999999999999999995 555432211100 0111 2
Q ss_pred cHHHHHHHHHHcC-CCcEEEEeechhHHHHHHHhc-Cc-ccceEEEecCCCC----------------------------
Q 025027 122 DAKPVIAALKAKG-VSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV---------------------------- 170 (259)
Q Consensus 122 d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~i~~~~~~~---------------------------- 170 (259)
.+..+.+.+.+.. .++++|+||||||.++..++. .+ +++++|.+++...
T Consensus 72 ~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PLN02211 72 YNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGF 151 (273)
T ss_pred HHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeee
Confidence 2344555555442 478999999999999999873 43 6777777643210
Q ss_pred --------C-----------------h----------------h---------hhhcc-CCcEEEeecCCCCCCChHHHH
Q 025027 171 --------T-----------------E----------------D---------EIKAV-KVPIAVLGAERDNGLPPAQMK 199 (259)
Q Consensus 171 --------~-----------------~----------------~---------~~~~~-~~Pvl~i~g~~D~~~~~~~~~ 199 (259)
. + . ...++ ++|+++|.|++|..+|++..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~ 231 (273)
T PLN02211 152 GLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQE 231 (273)
T ss_pred ccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHH
Confidence 0 0 0 01123 679999999999999999999
Q ss_pred HHHHHHhcCCCCCceEEecCCCCccccc
Q 025027 200 RFDEILSAKPKFDHLVKTYPGVCHGWTV 227 (259)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 227 (259)
.+.+.++ + .++..++ ++|....
T Consensus 232 ~m~~~~~---~--~~~~~l~-~gH~p~l 253 (273)
T PLN02211 232 AMIKRWP---P--SQVYELE-SDHSPFF 253 (273)
T ss_pred HHHHhCC---c--cEEEEEC-CCCCccc
Confidence 9888763 2 2667777 6996543
No 60
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.70 E-value=2.7e-15 Score=128.46 Aligned_cols=190 Identities=18% Similarity=0.171 Sum_probs=127.6
Q ss_pred eEeeeCCeeeEEeCCC-CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC
Q 025027 38 TVTELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 116 (259)
Q Consensus 38 ~~~~~~~~~~~~~~~~-~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 116 (259)
.....++++.++.... ..+++||++||+.+. ...|..+++.|++ +|.|+++|++ |+|.+....... ...++.
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~-~~~w~~~~~~L~~-~~~Via~Dlp-G~G~S~~p~~~~----~~~ys~ 180 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQ-AYSYRKVLPVLSK-NYHAIAFDWL-GFGFSDKPQPGY----GFNYTL 180 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCC-HHHHHHHHHHHhc-CCEEEEECCC-CCCCCCCCcccc----cccCCH
Confidence 3445677777665332 234678888876554 4578889999976 7999999995 555443211100 001122
Q ss_pred CcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-----------------------
Q 025027 117 DKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT----------------------- 171 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~----------------------- 171 (259)
+...+++.++++.+ +.+++.|+|||+||.+++.++ .+| +++++|++++....
T Consensus 181 ~~~a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~ 257 (383)
T PLN03084 181 DEYVSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQ 257 (383)
T ss_pred HHHHHHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhc
Confidence 34445555555555 556899999999999999988 444 78888887754100
Q ss_pred -------------------------------------------hhh-----------h------hccCCcEEEeecCCCC
Q 025027 172 -------------------------------------------EDE-----------I------KAVKVPIAVLGAERDN 191 (259)
Q Consensus 172 -------------------------------------------~~~-----------~------~~~~~Pvl~i~g~~D~ 191 (259)
... . ..+++|+++++|++|.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~ 337 (383)
T PLN03084 258 DPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDR 337 (383)
T ss_pred chHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCC
Confidence 000 0 1257899999999999
Q ss_pred CCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 192 GLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
+++.+..+.+.+.. +.++.++++++|.... +..+++.+.+.+||++
T Consensus 338 ~v~~~~~~~~a~~~------~a~l~vIp~aGH~~~~----------E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 338 WLNYDGVEDFCKSS------QHKLIELPMAGHHVQE----------DCGEELGGIISGILSK 383 (383)
T ss_pred CcCHHHHHHHHHhc------CCeEEEECCCCCCcch----------hCHHHHHHHHHHHhhC
Confidence 99988877776653 4478899999996643 2347888889998863
No 61
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.69 E-value=5.3e-15 Score=128.09 Aligned_cols=179 Identities=18% Similarity=0.165 Sum_probs=115.2
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccc-cHHHHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE-DAKPVIAALKA 132 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~i~~l~~ 132 (259)
..+|+||++||+.+. ...|...+..|+++ |.|+++|++ |+|.+... ..... ..+...+ -+..+.+++..
T Consensus 103 ~~~p~vvllHG~~~~-~~~~~~~~~~L~~~-~~vi~~D~r-G~G~S~~~-~~~~~------~~~~~~~~~~~~i~~~~~~ 172 (402)
T PLN02894 103 EDAPTLVMVHGYGAS-QGFFFRNFDALASR-FRVIAIDQL-GWGGSSRP-DFTCK------STEETEAWFIDSFEEWRKA 172 (402)
T ss_pred CCCCEEEEECCCCcc-hhHHHHHHHHHHhC-CEEEEECCC-CCCCCCCC-Ccccc------cHHHHHHHHHHHHHHHHHH
Confidence 445778888886554 35667778888874 999999995 55543221 11000 0011111 12334455555
Q ss_pred cCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC---------------------------------------
Q 025027 133 KGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT--------------------------------------- 171 (259)
Q Consensus 133 ~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~--------------------------------------- 171 (259)
.+.++++|+||||||.+++.++ .++ +++++|+.+|....
T Consensus 173 l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 252 (402)
T PLN02894 173 KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGL 252 (402)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhc
Confidence 5667999999999999999988 444 68877776542100
Q ss_pred -----------------------------------------------------------------hhhhhccCCcEEEee
Q 025027 172 -----------------------------------------------------------------EDEIKAVKVPIAVLG 186 (259)
Q Consensus 172 -----------------------------------------------------------------~~~~~~~~~Pvl~i~ 186 (259)
...+.++++|+++++
T Consensus 253 gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~ 332 (402)
T PLN02894 253 GPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIY 332 (402)
T ss_pred cchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEE
Confidence 001344688999999
Q ss_pred cCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 187 AERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 187 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
|++|.+.+ .....+.+.+ +...++++++++||....+ ..+.+.+.+.+|++..+++
T Consensus 333 G~~D~i~~-~~~~~~~~~~----~~~~~~~~i~~aGH~~~~E----------~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 333 GRHDWMNY-EGAVEARKRM----KVPCEIIRVPQGGHFVFLD----------NPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred eCCCCCCc-HHHHHHHHHc----CCCCcEEEeCCCCCeeecc----------CHHHHHHHHHHHHHHhccC
Confidence 99998765 4455555543 1246789999999965432 2378888899888887764
No 62
>PRK10115 protease 2; Provisional
Probab=99.69 E-value=2.1e-15 Score=138.11 Aligned_cols=186 Identities=13% Similarity=0.067 Sum_probs=132.5
Q ss_pred CCCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhc---cCCCcccccHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN---HTTDKGYEDAKPVIAA 129 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~i~~ 129 (259)
++.|.||..||+++.. .+.|......|+++||+|+.++.|+|.+.... |... .......+|+.+++++
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~--------w~~~g~~~~k~~~~~D~~a~~~~ 514 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ--------WYEDGKFLKKKNTFNDYLDACDA 514 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH--------HHHhhhhhcCCCcHHHHHHHHHH
Confidence 3457899999999965 24566667789999999999999865554322 2111 1123556899999999
Q ss_pred HHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC---------------------------------
Q 025027 130 LKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT--------------------------------- 171 (259)
Q Consensus 130 l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~--------------------------------- 171 (259)
|.++ ++.|++++|.|.||.++..++ ..| .++|+|+..|..+.
T Consensus 515 Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~ 594 (686)
T PRK10115 515 LLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKS 594 (686)
T ss_pred HHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHH
Confidence 9876 578999999999999999877 444 79999987765321
Q ss_pred ---hhhhhccCCc-EEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEec---CCCCccccccCCCCChhhhhHHHHHH
Q 025027 172 ---EDEIKAVKVP-IAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTY---PGVCHGWTVRYFVNDTFAVNSAAEAH 244 (259)
Q Consensus 172 ---~~~~~~~~~P-vl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g~~H~~~~~~~~~~~~~~~~~~~~~ 244 (259)
..++.+++.| +|+++|.+|..||+....++..+|+. .+.+.++.++ ++.||+... +. ...-+..
T Consensus 595 ~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~-~~~~~~~vl~~~~~~~GHg~~~--~r------~~~~~~~ 665 (686)
T PRK10115 595 YSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRE-LKTDDHLLLLCTDMDSGHGGKS--GR------FKSYEGV 665 (686)
T ss_pred cCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHh-cCCCCceEEEEecCCCCCCCCc--CH------HHHHHHH
Confidence 1234555678 67779999999999999999999954 4556666777 899998421 11 2234444
Q ss_pred HHHHHHHHHhhh
Q 025027 245 EDMINWFEKHVK 256 (259)
Q Consensus 245 ~~~~~fl~~~~~ 256 (259)
.....||...+.
T Consensus 666 A~~~aFl~~~~~ 677 (686)
T PRK10115 666 AMEYAFLIALAQ 677 (686)
T ss_pred HHHHHHHHHHhC
Confidence 555677766543
No 63
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.69 E-value=4.8e-16 Score=123.02 Aligned_cols=137 Identities=23% Similarity=0.349 Sum_probs=91.0
Q ss_pred ccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC-------------------------
Q 025027 121 EDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT------------------------- 171 (259)
Q Consensus 121 ~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~------------------------- 171 (259)
+-+..+++||+++ +.++|+|+|.|.||-+++.+| ..+.|+++|+++|+...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 5577899999987 457999999999999999988 56899999998875321
Q ss_pred ------------------------hhhhhccCCcEEEeecCCCCCCCh-HHHHHHHHHHhcCCC-CCceEEecCCCCccc
Q 025027 172 ------------------------EDEIKAVKVPIAVLGAERDNGLPP-AQMKRFDEILSAKPK-FDHLVKTYPGVCHGW 225 (259)
Q Consensus 172 ------------------------~~~~~~~~~Pvl~i~g~~D~~~~~-~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~ 225 (259)
.-.+.++++|+|++.|++|.+.|. +.++.+.+.++.+.. ...++..|+++||.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 012566789999999999999985 555567777754433 257889999999998
Q ss_pred cccCCCCChh------------------hhhHHHHHHHHHHHHHHHhhhc
Q 025027 226 TVRYFVNDTF------------------AVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 226 ~~~~~~~~~~------------------~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
..++.+.... +..+.++.|+++++||++++++
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7655433221 1268999999999999999863
No 64
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.68 E-value=8.9e-16 Score=121.44 Aligned_cols=152 Identities=26% Similarity=0.436 Sum_probs=108.1
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCCcE
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVSAV 138 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i 138 (259)
||++||+.+.. ..|..+++.|+ +||.|+++|++ |.+.+....... ..+.++..+++ .+.++..+.+++
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~-~~~~v~~~d~~-G~G~s~~~~~~~------~~~~~~~~~~l---~~~l~~~~~~~~ 68 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALA-RGYRVIAFDLP-GHGRSDPPPDYS------PYSIEDYAEDL---AELLDALGIKKV 68 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHH-TTSEEEEEECT-TSTTSSSHSSGS------GGSHHHHHHHH---HHHHHHTTTSSE
T ss_pred eEEECCCCCCH-HHHHHHHHHHh-CCCEEEEEecC-CccccccccccC------Ccchhhhhhhh---hhcccccccccc
Confidence 57777766665 67899999995 79999999995 555443321100 11112223344 444444455799
Q ss_pred EEEeechhHHHHHHHh-cCc-ccceEEEecCCCC-------C--------------------------------------
Q 025027 139 GAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------T-------------------------------------- 171 (259)
Q Consensus 139 ~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~-------~-------------------------------------- 171 (259)
.++|||+||.+++.++ .+| +++++++++|... .
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccc
Confidence 9999999999999988 455 8999999988762 1
Q ss_pred --------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccc
Q 025027 172 --------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTV 227 (259)
Q Consensus 172 --------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 227 (259)
...+.++++|+++++|++|.+++.+..+.+.+.++ ++++..+++++|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 149 RSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-----NAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-----TEEEEEETTSSSTHHH
T ss_pred cccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-----CCEEEEECCCCCccHH
Confidence 01235568999999999999999888888877763 5689999999997643
No 65
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.68 E-value=1.9e-15 Score=115.10 Aligned_cols=185 Identities=18% Similarity=0.254 Sum_probs=136.4
Q ss_pred eeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccH
Q 025027 45 LKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDA 123 (259)
Q Consensus 45 ~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 123 (259)
+++|....+++.|.++++|+.-|.- .....+++-+-.+ +..|+.+++| |.|-+.+.+. .+-..-|.
T Consensus 67 L~a~~~~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYR-GYG~S~Gsps-----------E~GL~lDs 133 (300)
T KOG4391|consen 67 LDAYLMLSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYR-GYGKSEGSPS-----------EEGLKLDS 133 (300)
T ss_pred EeeeeecccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEee-ccccCCCCcc-----------ccceeccH
Confidence 8888888778888999999877754 3456677765544 8999999996 4433322221 13345789
Q ss_pred HHHHHHHHHc---CCCcEEEEeechhHHHHHHHhcC--cccceEEEecCCCCC---------------------------
Q 025027 124 KPVIAALKAK---GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSNVT--------------------------- 171 (259)
Q Consensus 124 ~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~--~~i~~~i~~~~~~~~--------------------------- 171 (259)
+++++++..+ +..+|++.|-|.||.+++.+|+. .++.++|.=+.+..-
T Consensus 134 ~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S 213 (300)
T KOG4391|consen 134 EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLS 213 (300)
T ss_pred HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHHhhhcc
Confidence 9999999765 56799999999999999998854 478888874432210
Q ss_pred hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 025027 172 EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 172 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
...+..-+.|.|++.|.+|++|||-...++++..+++ .+++..||++.|.-+-.. +-.|+.+.+||
T Consensus 214 ~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~---~Krl~eFP~gtHNDT~i~-----------dGYfq~i~dFl 279 (300)
T KOG4391|consen 214 YRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR---TKRLAEFPDGTHNDTWIC-----------DGYFQAIEDFL 279 (300)
T ss_pred hhhhccccCceEEeecCccccCCcHHHHHHHHhCchh---hhhheeCCCCccCceEEe-----------ccHHHHHHHHH
Confidence 1122333679999999999999999999999988543 558899999999654322 45788999999
Q ss_pred HHhhh
Q 025027 252 EKHVK 256 (259)
Q Consensus 252 ~~~~~ 256 (259)
.+...
T Consensus 280 aE~~~ 284 (300)
T KOG4391|consen 280 AEVVK 284 (300)
T ss_pred HHhcc
Confidence 98754
No 66
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.67 E-value=7.3e-15 Score=123.03 Aligned_cols=189 Identities=15% Similarity=0.143 Sum_probs=120.6
Q ss_pred CceEeeeCCeeeEEeCCCC-CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhcc
Q 025027 36 AGTVTELGGLKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 114 (259)
Q Consensus 36 ~g~~~~~~~~~~~~~~~~~-~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 114 (259)
.+.+...++.++++..... ..++||++||+.+... +..+...+..++|.|+++|++ |+|.+....... ..
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~--~~~~~~~~~~~~~~vi~~D~~-G~G~S~~~~~~~------~~ 76 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGT--DPGCRRFFDPETYRIVLFDQR-GCGKSTPHACLE------EN 76 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCC--CHHHHhccCccCCEEEEECCC-CCCCCCCCCCcc------cC
Confidence 3455556677777654432 2467999999877643 234445565678999999995 555443211100 01
Q ss_pred CCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC----------------------
Q 025027 115 TTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV---------------------- 170 (259)
Q Consensus 115 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~---------------------- 170 (259)
..++..+++..+++.+ +.+++.++||||||.+++.++ .+| +++++|+.++...
T Consensus 77 ~~~~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (306)
T TIGR01249 77 TTWDLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQ 153 (306)
T ss_pred CHHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHH
Confidence 1122334444444433 556899999999999999987 444 5676665432100
Q ss_pred ----------C-------------------------------h------------------------h------------
Q 025027 171 ----------T-------------------------------E------------------------D------------ 173 (259)
Q Consensus 171 ----------~-------------------------------~------------------------~------------ 173 (259)
. . .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
T TIGR01249 154 RFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFL 233 (306)
T ss_pred HHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchh
Confidence 0 0 0
Q ss_pred --------hhhcc-CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHH
Q 025027 174 --------EIKAV-KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAH 244 (259)
Q Consensus 174 --------~~~~~-~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~ 244 (259)
.+.++ ++|+++++|++|.++|.+....+.+.++ ..++.++++++|.... +...
T Consensus 234 ~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~-------------~~~~ 295 (306)
T TIGR01249 234 DVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----EAELKVTNNAGHSAFD-------------PNNL 295 (306)
T ss_pred cCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCCCC-------------hHHH
Confidence 01123 5799999999999999999998888863 4578889999997632 4566
Q ss_pred HHHHHHHHHh
Q 025027 245 EDMINWFEKH 254 (259)
Q Consensus 245 ~~~~~fl~~~ 254 (259)
+.+.+|+++.
T Consensus 296 ~~i~~~~~~~ 305 (306)
T TIGR01249 296 AALVHALETY 305 (306)
T ss_pred HHHHHHHHHh
Confidence 7777777664
No 67
>PLN00021 chlorophyllase
Probab=99.67 E-value=8.1e-15 Score=122.25 Aligned_cols=195 Identities=19% Similarity=0.227 Sum_probs=126.2
Q ss_pred CCeeeEEeCCCC--CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccc
Q 025027 43 GGLKAYVTGPPH--SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 120 (259)
Q Consensus 43 ~~~~~~~~~~~~--~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (259)
-++++.+..|.. ..|+||++||+.+. ...|..++++|+++||.|+++|++ +... ... ...+
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~-~~~y~~l~~~Las~G~~VvapD~~-g~~~--~~~-------------~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLY-NSFYSQLLQHIASHGFIVVAPQLY-TLAG--PDG-------------TDEI 99 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCC-cccHHHHHHHHHhCCCEEEEecCC-CcCC--CCc-------------hhhH
Confidence 346677776653 33666666666554 467899999999999999999984 4321 110 0112
Q ss_pred ccHHHHHHHHHHc-----------CCCcEEEEeechhHHHHHHHhc-Cc------ccceEEEecCCCCCh----------
Q 025027 121 EDAKPVIAALKAK-----------GVSAVGAAGFCWGGKVAVKLAS-NQ------DVQAAVLLHPSNVTE---------- 172 (259)
Q Consensus 121 ~d~~~~i~~l~~~-----------~~~~i~l~G~S~Gg~~a~~~a~-~~------~i~~~i~~~~~~~~~---------- 172 (259)
++..++++|+.+. +.++++++|||+||.+++.++. .+ ++++++.++|.....
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il 179 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVL 179 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCccc
Confidence 3455566666531 3468999999999999999883 22 689999988853211
Q ss_pred ---hhhhccCCcEEEeecCCCC-----CC----Ch-HHHHHHHHHHhcCCCCCceEEecCCCCccccccCCC-C------
Q 025027 173 ---DEIKAVKVPIAVLGAERDN-----GL----PP-AQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFV-N------ 232 (259)
Q Consensus 173 ---~~~~~~~~Pvl~i~g~~D~-----~~----~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~-~------ 232 (259)
....++..|+|++.+..|. .+ |. ....++++..+. +..+.+.++++|.-..+... .
T Consensus 180 ~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 255 (313)
T PLN00021 180 TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA----PAVHFVAKDYGHMDMLDDDTSGIRGKIT 255 (313)
T ss_pred ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC----CeeeeeecCCCcceeecCCCcccccccc
Confidence 0223467999999998763 22 23 333667777632 55777888889955433320 0
Q ss_pred -----C-hhhhhHHHHHHHHHHHHHHHhhhcC
Q 025027 233 -----D-TFAVNSAAEAHEDMINWFEKHVKCD 258 (259)
Q Consensus 233 -----~-~~~~~~~~~~~~~~~~fl~~~~~~~ 258 (259)
. .......+.+...+..||+.++.++
T Consensus 256 ~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 256 GCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 0 0012456777788999999988754
No 68
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.66 E-value=2.6e-15 Score=129.28 Aligned_cols=71 Identities=15% Similarity=0.112 Sum_probs=55.1
Q ss_pred hccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecC-CCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 176 KAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYP-GVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 176 ~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
.+|++|+|+++|++|.++|++..+.+.+.++. .+..+++.+++ ++||.... +..+++.+.+.+||++.
T Consensus 306 ~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~-a~~~~~l~~i~~~~GH~~~l----------e~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 306 ARIKARFLVVSFTSDWLFPPARSREIVDALLA-AGADVSYAEIDSPYGHDAFL----------LDDPRYGRLVRAFLERA 374 (379)
T ss_pred hcCCCCEEEEEECCccccCHHHHHHHHHHHHh-cCCCeEEEEeCCCCCchhHh----------cCHHHHHHHHHHHHHhh
Confidence 35688999999999999999999999999943 23344666664 89997643 23478899999999986
Q ss_pred hhc
Q 025027 255 VKC 257 (259)
Q Consensus 255 ~~~ 257 (259)
.+.
T Consensus 375 ~~~ 377 (379)
T PRK00175 375 ARE 377 (379)
T ss_pred hhc
Confidence 554
No 69
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.65 E-value=5.5e-15 Score=117.25 Aligned_cols=146 Identities=16% Similarity=0.181 Sum_probs=95.7
Q ss_pred CCeeEEEEeccCCCCchhHH---HHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhc---cCCCcccccHHHHHH
Q 025027 55 SKKAVLMISDIYGDEPPIYR---SVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN---HTTDKGYEDAKPVIA 128 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~---~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~i~ 128 (259)
+.|.||++||+.+.. ..+. .+.+...+.||.|++||++ |.+....+. .|... ........++..+++
T Consensus 12 ~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~ 84 (212)
T TIGR01840 12 PRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQT-SYNSSNNCW-----DWFFTHHRARGTGEVESLHQLID 84 (212)
T ss_pred CCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCc-CccccCCCC-----CCCCccccCCCCccHHHHHHHHH
Confidence 346677777765543 3333 3555555679999999995 332111110 11110 011233466788888
Q ss_pred HHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh-----------------h-----------hh
Q 025027 129 ALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE-----------------D-----------EI 175 (259)
Q Consensus 129 ~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~-----------------~-----------~~ 175 (259)
++.++ +.++|.|+|||+||.+++.++ .++ .+.+++.+++..... . ..
T Consensus 85 ~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (212)
T TIGR01840 85 AVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEY 164 (212)
T ss_pred HHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcc
Confidence 88765 457999999999999999987 455 588888888764210 0 01
Q ss_pred hccCCcEEEeecCCCCCCChHHHHHHHHHHhc
Q 025027 176 KAVKVPIAVLGAERDNGLPPAQMKRFDEILSA 207 (259)
Q Consensus 176 ~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~ 207 (259)
.....|++++||++|.+||++..+.+.+.++.
T Consensus 165 ~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 165 NGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred cCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 12345578999999999999999999999864
No 70
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.65 E-value=8.3e-16 Score=115.78 Aligned_cols=194 Identities=16% Similarity=0.188 Sum_probs=144.4
Q ss_pred CceEeeeCCeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcC-CEEEeeccC-CCCCCCCCCCCcchhhhhhc
Q 025027 36 AGTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAG-FLVVAPDFF-HGDAANPSNPKYDKDTWRKN 113 (259)
Q Consensus 36 ~g~~~~~~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G-~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~ 113 (259)
+...+.++|..+.+.+....+..|+++.|..|+.+..|......+.+.- +.++++|.+ +|.++.++ ......
T Consensus 22 te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~-Rkf~~~----- 95 (277)
T KOG2984|consen 22 TESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE-RKFEVQ----- 95 (277)
T ss_pred hhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc-ccchHH-----
Confidence 3455677888888877666566899999999988777777777666664 999999997 56665544 222222
Q ss_pred cCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcC-c-ccceEEEecCCCCC--------------------
Q 025027 114 HTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNVT-------------------- 171 (259)
Q Consensus 114 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~i~~~~~~~~-------------------- 171 (259)
-..+|.+++++.++..+.+++.++|||-||.+++.+|.. + .|..+|...+.-..
T Consensus 96 ----ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r 171 (277)
T KOG2984|consen 96 ----FFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSAR 171 (277)
T ss_pred ----HHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhh
Confidence 233688999999998888899999999999999998743 3 56666654432110
Q ss_pred -------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCce
Q 025027 172 -------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHL 214 (259)
Q Consensus 172 -------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 214 (259)
...+.++++|+|++||+.|++++...+.-+....+ -.+
T Consensus 172 ~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~-----~a~ 246 (277)
T KOG2984|consen 172 GRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS-----LAK 246 (277)
T ss_pred hcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc-----cce
Confidence 12467899999999999999998777776665542 347
Q ss_pred EEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 215 VKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 215 ~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+.++|.++|.|..++ +++..+.+.+||+.+
T Consensus 247 ~~~~peGkHn~hLry----------a~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 247 VEIHPEGKHNFHLRY----------AKEFNKLVLDFLKST 276 (277)
T ss_pred EEEccCCCcceeeec----------hHHHHHHHHHHHhcc
Confidence 889999999986543 578899999999863
No 71
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.65 E-value=5.3e-15 Score=126.20 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=48.0
Q ss_pred ccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEE-ecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 177 AVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVK-TYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 177 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
+|++|+|+++|++|.++|++.++.+.+.++. ....++++ +++++||.... +..+++.+.+.+||+
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~~~i~~~~GH~~~l----------e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTYVEIESPYGHDAFL----------VETDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEEEEeCCCCCcchhh----------cCHHHHHHHHHHHhC
Confidence 4578999999999999999999999999852 21112222 56789996644 234788888888874
No 72
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.64 E-value=3.9e-15 Score=127.15 Aligned_cols=196 Identities=16% Similarity=0.257 Sum_probs=107.3
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCC---CCCC-cc---------------hhhh-------
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANP---SNPK-YD---------------KDTW------- 110 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~---~~~~-~~---------------~~~~------- 110 (259)
-|||++.||.|.....|..++..||++||+|+++|++.|..... .... .. +...
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 45666666666555789999999999999999999985532100 0000 00 0000
Q ss_pred hhccCCCcccccHHHHHHHHHHc-----------------------CCCcEEEEeechhHHHHHHHh-cCcccceEEEec
Q 025027 111 RKNHTTDKGYEDAKPVIAALKAK-----------------------GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLH 166 (259)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~l~~~-----------------------~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~ 166 (259)
.+....+.+..++..+++.|... +..+|+++|||+||.+++.++ .+.++++.|.+.
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~LD 259 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGILLD 259 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEEEeC
Confidence 00001133445566677666531 245899999999999999977 567999999999
Q ss_pred CCCCCh--hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCCh----------
Q 025027 167 PSNVTE--DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDT---------- 234 (259)
Q Consensus 167 ~~~~~~--~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~---------- 234 (259)
|+..+. +....++.|+|+|..+. . -..+....+.+.. . ......+..+.|..|.-..+-..-.|
T Consensus 260 ~W~~Pl~~~~~~~i~~P~L~InSe~-f-~~~~~~~~~~~~~-~-~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~ 335 (379)
T PF03403_consen 260 PWMFPLGDEIYSKIPQPLLFINSES-F-QWWENIFRMKKVI-S-NNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLK 335 (379)
T ss_dssp ---TTS-GGGGGG--S-EEEEEETT-T---HHHHHHHHTT----TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS
T ss_pred CcccCCCcccccCCCCCEEEEECcc-c-CChhhHHHHHHHh-c-cCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccc
Confidence 987653 34577899999998764 3 2334444444433 2 22355778899999965332111111
Q ss_pred ---hhhhHHHHHHHHHHHHHHHhhh
Q 025027 235 ---FAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 235 ---~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
....+.+...+.+++||++++.
T Consensus 336 g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 336 GSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp -SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 1125678888899999999976
No 73
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.63 E-value=6.7e-14 Score=101.73 Aligned_cols=191 Identities=18% Similarity=0.230 Sum_probs=122.1
Q ss_pred EEeCCCCCCeeEEEEeccCC--CCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCC--CCCcchhhhhhccCCCcccccH
Q 025027 48 YVTGPPHSKKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPS--NPKYDKDTWRKNHTTDKGYEDA 123 (259)
Q Consensus 48 ~~~~~~~~~~~vil~~~~~g--~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~d~ 123 (259)
+...|.++.+.+|++.||-| +.++.+...+..|+.+||.|..+++.|-.-+... .+... ....-..-
T Consensus 5 ~~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~---------~~t~~~~~ 75 (213)
T COG3571 5 FLFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG---------SGTLNPEY 75 (213)
T ss_pred cccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCc---------cccCCHHH
Confidence 44567777777666666666 3456788899999999999999998542211111 00000 00111122
Q ss_pred HHHHHHHHHc-CCCcEEEEeechhHHHHHHHhc--CcccceEEEec-CCCCC-------hhhhhccCCcEEEeecCCCCC
Q 025027 124 KPVIAALKAK-GVSAVGAAGFCWGGKVAVKLAS--NQDVQAAVLLH-PSNVT-------EDEIKAVKVPIAVLGAERDNG 192 (259)
Q Consensus 124 ~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~--~~~i~~~i~~~-~~~~~-------~~~~~~~~~Pvl~i~g~~D~~ 192 (259)
..++..+... ...++++.|+||||.++.+++. .-.|.+++++. |+-.+ .+.+..++.|++|.+|+.|++
T Consensus 76 ~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~f 155 (213)
T COG3571 76 IVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDEF 155 (213)
T ss_pred HHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeecccccc
Confidence 2333444433 4458999999999999999883 33588888863 43322 346788899999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 193 LPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
-+.+.+..+ .+ + .++++++++++.|.+-.....+--..........+.+..|+++
T Consensus 156 Gtr~~Va~y--~l-s---~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 156 GTRDEVAGY--AL-S---DPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cCHHHHHhh--hc-C---CceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 887776332 22 1 2789999999999885433211111113455666777788765
No 74
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.62 E-value=1.8e-14 Score=120.85 Aligned_cols=173 Identities=22% Similarity=0.240 Sum_probs=117.5
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccCCCCCC-CCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAA-NPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
.+++||++||+.+ +...|..+...|.+. |+.|+++|.+ |.+. +.......+. ..+.+....+....
T Consensus 57 ~~~pvlllHGF~~-~~~~w~~~~~~L~~~~~~~v~aiDl~-G~g~~s~~~~~~~y~----------~~~~v~~i~~~~~~ 124 (326)
T KOG1454|consen 57 DKPPVLLLHGFGA-SSFSWRRVVPLLSKAKGLRVLAIDLP-GHGYSSPLPRGPLYT----------LRELVELIRRFVKE 124 (326)
T ss_pred CCCcEEEeccccC-CcccHhhhccccccccceEEEEEecC-CCCcCCCCCCCCcee----------hhHHHHHHHHHHHh
Confidence 4578888888666 556788988888877 6999999995 5442 2211111100 01112222222233
Q ss_pred cCCCcEEEEeechhHHHHHHHh-cCc-ccceEE---EecCCCCC------------------------------------
Q 025027 133 KGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAV---LLHPSNVT------------------------------------ 171 (259)
Q Consensus 133 ~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i---~~~~~~~~------------------------------------ 171 (259)
....++.++|||+||.+++.+| ..| .++.++ .+.+....
T Consensus 125 ~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 204 (326)
T KOG1454|consen 125 VFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSE 204 (326)
T ss_pred hcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeH
Confidence 3556799999999999999988 444 688888 33222110
Q ss_pred ---------------------------------------------------hhhhhccC-CcEEEeecCCCCCCChHHHH
Q 025027 172 ---------------------------------------------------EDEIKAVK-VPIAVLGAERDNGLPPAQMK 199 (259)
Q Consensus 172 ---------------------------------------------------~~~~~~~~-~Pvl~i~g~~D~~~~~~~~~ 199 (259)
.....++. +|+|+++|++|.++|.+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 205 GLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHH
Confidence 01234555 99999999999999999777
Q ss_pred HHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 200 RFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
.+.+.++ .+++.+++++||.-.. +..+.+.+.+..|+.+.
T Consensus 285 ~~~~~~p-----n~~~~~I~~~gH~~h~----------e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 285 ELKKKLP-----NAELVEIPGAGHLPHL----------ERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHhhCC-----CceEEEeCCCCccccc----------CCHHHHHHHHHHHHHHh
Confidence 7777652 6789999999996532 24589999999999875
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.62 E-value=2.3e-14 Score=116.43 Aligned_cols=194 Identities=20% Similarity=0.331 Sum_probs=127.7
Q ss_pred eeeEEeC-CCCCC-eeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccc
Q 025027 45 LKAYVTG-PPHSK-KAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 121 (259)
Q Consensus 45 ~~~~~~~-~~~~~-~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (259)
..+.... |..++ |.||++||..|+. +++.+.+++.+.++||.|+++++| |++..+.....-+ ..-..+
T Consensus 62 ~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~R-gcs~~~n~~p~~y--------h~G~t~ 132 (345)
T COG0429 62 IDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFR-GCSGEANTSPRLY--------HSGETE 132 (345)
T ss_pred EEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecc-cccCCcccCccee--------cccchh
Confidence 3344433 43433 5789999988854 456677999999999999999994 7665443211110 122338
Q ss_pred cHHHHHHHHHHc-CCCcEEEEeechhHHHHHH-Hh---cCcccceEEEe-cCCCCC------------------------
Q 025027 122 DAKPVIAALKAK-GVSAVGAAGFCWGGKVAVK-LA---SNQDVQAAVLL-HPSNVT------------------------ 171 (259)
Q Consensus 122 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~-~a---~~~~i~~~i~~-~~~~~~------------------------ 171 (259)
|+..++++++.. ...++..+|+|+||.+... ++ .+..+.+.+++ .|+...
T Consensus 133 D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~ 212 (345)
T COG0429 133 DIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLK 212 (345)
T ss_pred HHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHH
Confidence 999999999875 6779999999999955555 55 23345555443 332100
Q ss_pred ------------------------------------------------------hhhhhccCCcEEEeecCCCCCCChHH
Q 025027 172 ------------------------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQ 197 (259)
Q Consensus 172 ------------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~ 197 (259)
...+++|++|+|+|++.+|++++++.
T Consensus 213 ~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~ 292 (345)
T COG0429 213 RNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEV 292 (345)
T ss_pred HHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhh
Confidence 12367889999999999999998766
Q ss_pred HHHHHHHHhcCCCCCceEEecCCCCc-cccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 198 MKRFDEILSAKPKFDHLVKTYPGVCH-GWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 198 ~~~~~~~l~~~~~~~~~~~~~~g~~H-~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
........ +..+.+..-+.+|| +|... ....+ .....+.+.+||+..++.
T Consensus 293 iP~~~~~~----np~v~l~~t~~GGHvGfl~~-~~~~~-----~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 293 IPKLQEML----NPNVLLQLTEHGGHVGFLGG-KLLHP-----QMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCcchhcC----CCceEEEeecCCceEEeccC-ccccc-----hhhHHHHHHHHHHHHHhh
Confidence 66544432 22566766677789 55432 22111 246778899999887653
No 76
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=1.2e-14 Score=114.34 Aligned_cols=190 Identities=18% Similarity=0.216 Sum_probs=131.0
Q ss_pred eeeEEeCCCCC---CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCC-CC---CCCc-chhhhhhccC-
Q 025027 45 LKAYVTGPPHS---KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAAN-PS---NPKY-DKDTWRKNHT- 115 (259)
Q Consensus 45 ~~~~~~~~~~~---~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~-~~---~~~~-~~~~~~~~~~- 115 (259)
+.+++..|... .|+||.+||..|... .+..+. .++..||.|+.+|.| |.+.+ .+ .+.. ....|+.+..
T Consensus 69 I~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l-~wa~~Gyavf~MdvR-GQg~~~~dt~~~p~~~s~pG~mtrGil 145 (321)
T COG3458 69 IKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDML-HWAVAGYAVFVMDVR-GQGSSSQDTADPPGGPSDPGFMTRGIL 145 (321)
T ss_pred EEEEEEeecccCCccceEEEEeeccCCCC-Cccccc-cccccceeEEEEecc-cCCCccccCCCCCCCCcCCceeEeecc
Confidence 78888777643 467778877666553 233333 367789999999996 43322 11 1111 1122222211
Q ss_pred -------CCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC-------------
Q 025027 116 -------TDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT------------- 171 (259)
Q Consensus 116 -------~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~------------- 171 (259)
+.....|+..+++.+.+. +..||++.|.|+||.+++.++ .+++|+++++.+|++..
T Consensus 146 D~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~~~~y 225 (321)
T COG3458 146 DRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELATEGPY 225 (321)
T ss_pred cCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccccchhheeecccCcH
Confidence 234456777888888765 678999999999999999977 77899999999998643
Q ss_pred --------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 172 --------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 172 --------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
.....++++|+|+..|--|+++||...-.+++++. . ++++.+|+--+|.-
T Consensus 226 dei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~---~K~i~iy~~~aHe~ 301 (321)
T COG3458 226 DEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-T---SKTIEIYPYFAHEG 301 (321)
T ss_pred HHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhccc-C---CceEEEeecccccc
Confidence 11246789999999999999999999999999983 2 45777777666733
Q ss_pred cccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 226 TVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
. . ....+++..|++..
T Consensus 302 ~----p---------~~~~~~~~~~l~~l 317 (321)
T COG3458 302 G----P---------GFQSRQQVHFLKIL 317 (321)
T ss_pred C----c---------chhHHHHHHHHHhh
Confidence 2 2 33445677787753
No 77
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.61 E-value=2.3e-14 Score=109.10 Aligned_cols=158 Identities=17% Similarity=0.266 Sum_probs=117.8
Q ss_pred CeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC
Q 025027 56 KKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG 134 (259)
Q Consensus 56 ~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 134 (259)
...++++||....+ ...+..+|.+|++.|+.++.+|+ .|.|.+.++..+. .+...++|+..+++++...+
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF-~GnGeS~gsf~~G--------n~~~eadDL~sV~q~~s~~n 103 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDF-SGNGESEGSFYYG--------NYNTEADDLHSVIQYFSNSN 103 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEe-cCCCCcCCccccC--------cccchHHHHHHHHHHhccCc
Confidence 35677777776654 34567789999999999999999 5666554433222 12344489999999998654
Q ss_pred CCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC------------------------------------------
Q 025027 135 VSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT------------------------------------------ 171 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~------------------------------------------ 171 (259)
..=-+++|||-||.+++.++ ..+.++-+|.++|....
T Consensus 104 r~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmd 183 (269)
T KOG4667|consen 104 RVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMD 183 (269)
T ss_pred eEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHH
Confidence 44458999999999999988 44567777777665321
Q ss_pred ------hhhhhcc--CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccc
Q 025027 172 ------EDEIKAV--KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTV 227 (259)
Q Consensus 172 ------~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 227 (259)
.+...+| +||||-+||..|.+||.+++..+++.++ ...+..++|+.|.|+.
T Consensus 184 rLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-----nH~L~iIEgADHnyt~ 242 (269)
T KOG4667|consen 184 RLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-----NHKLEIIEGADHNYTG 242 (269)
T ss_pred HHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-----CCceEEecCCCcCccc
Confidence 1122233 7899999999999999999999999984 2478899999999964
No 78
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.60 E-value=1e-13 Score=113.37 Aligned_cols=186 Identities=18% Similarity=0.184 Sum_probs=118.8
Q ss_pred CCeeeEEeC--CC-CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCc
Q 025027 43 GGLKAYVTG--PP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDK 118 (259)
Q Consensus 43 ~~~~~~~~~--~~-~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 118 (259)
++...+... ++ ..++++|++||..+. ...|..-.+.|++ .+.|+++|++ .|.+..+.-..+. ...
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg-~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~---------~~~ 142 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAG-LGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDP---------TTA 142 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchh-HHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCc---------ccc
Confidence 344555432 23 334678888875544 3566677778888 6999999996 3444333211111 011
Q ss_pred ccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-------------------------
Q 025027 119 GYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------- 171 (259)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------------------- 171 (259)
...-+..+=+|-...+..+.+|+|||+||+++..+| .+| +|+.+|+.+|+..+
T Consensus 143 e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~ 222 (365)
T KOG4409|consen 143 EKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVAT 222 (365)
T ss_pred hHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhh
Confidence 112223333333445778999999999999999988 555 89999999886432
Q ss_pred -----------------------------------------------------------------------hhhhhcc--
Q 025027 172 -----------------------------------------------------------------------EDEIKAV-- 178 (259)
Q Consensus 172 -----------------------------------------------------------------------~~~~~~~-- 178 (259)
.+.+...
T Consensus 223 ~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~ 302 (365)
T KOG4409|consen 223 NFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKK 302 (365)
T ss_pred cCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhcc
Confidence 1223333
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
.+|+++++|++|.+- ......+...+ ....++++.+|++||....+ ..+...+.+..+++.
T Consensus 303 ~~pv~fiyG~~dWmD-~~~g~~~~~~~---~~~~~~~~~v~~aGHhvylD----------np~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 303 DVPVTFIYGDRDWMD-KNAGLEVTKSL---MKEYVEIIIVPGAGHHVYLD----------NPEFFNQIVLEECDK 363 (365)
T ss_pred CCCEEEEecCccccc-chhHHHHHHHh---hcccceEEEecCCCceeecC----------CHHHHHHHHHHHHhc
Confidence 489999999999874 34555555544 22357899999999976442 236777777777764
No 79
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.60 E-value=8.9e-14 Score=116.79 Aligned_cols=173 Identities=24% Similarity=0.234 Sum_probs=123.0
Q ss_pred CCeeEEEEeccCC---CCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 55 SKKAVLMISDIYG---DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 55 ~~~~vil~~~~~g---~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
+.|.||++|||.= ........++...+..|+.|+++||+-. + .+.+...++|+.+++.|+.
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla-P---------------e~~~p~~~~d~~~a~~~l~ 141 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA-P---------------EHPFPAALEDAYAAYRWLR 141 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC-C---------------CCCCCchHHHHHHHHHHHH
Confidence 3567778886632 2222224455566667999999999611 1 0124456688999999998
Q ss_pred Hc------CCCcEEEEeechhHHHHHHHhc------CcccceEEEecCCCCCh---------------------------
Q 025027 132 AK------GVSAVGAAGFCWGGKVAVKLAS------NQDVQAAVLLHPSNVTE--------------------------- 172 (259)
Q Consensus 132 ~~------~~~~i~l~G~S~Gg~~a~~~a~------~~~i~~~i~~~~~~~~~--------------------------- 172 (259)
++ ++++|+++|+|.||.+++.++. .+..++.+.++|.....
T Consensus 142 ~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
T COG0657 142 ANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADL 221 (312)
T ss_pred hhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHHHH
Confidence 65 4789999999999999999882 23678888888763210
Q ss_pred ------------------hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCCh
Q 025027 173 ------------------DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDT 234 (259)
Q Consensus 173 ------------------~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~ 234 (259)
..+.. -.|+++++|+.|.+.+ +...+.+.+ .+.|+.+++..++|+.|+|.....
T Consensus 222 ~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L-~~agv~~~~~~~~g~~H~f~~~~~---- 293 (312)
T COG0657 222 YLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERL-RAAGVPVELRVYPGMIHGFDLLTG---- 293 (312)
T ss_pred hCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHH-HHcCCeEEEEEeCCcceeccccCc----
Confidence 00122 4689999999999976 788888888 557889999999999999854332
Q ss_pred hhhhHHHHHHHHHHHHHHHh
Q 025027 235 FAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 235 ~~~~~~~~~~~~~~~fl~~~ 254 (259)
..+.+.+..+.+|+++.
T Consensus 294 ---~~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 294 ---PEARSALRQIAAFLRAA 310 (312)
T ss_pred ---HHHHHHHHHHHHHHHHh
Confidence 23456688888888743
No 80
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.59 E-value=7.3e-14 Score=138.51 Aligned_cols=183 Identities=12% Similarity=0.175 Sum_probs=118.1
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV 135 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (259)
+++||++||+.+.. ..|..+.+.|.+ +|.|+++|++ |++.+..........-....+.+...+++.++++ ..+.
T Consensus 1371 ~~~vVllHG~~~s~-~~w~~~~~~L~~-~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~---~l~~ 1444 (1655)
T PLN02980 1371 GSVVLFLHGFLGTG-EDWIPIMKAISG-SARCISIDLP-GHGGSKIQNHAKETQTEPTLSVELVADLLYKLIE---HITP 1444 (1655)
T ss_pred CCeEEEECCCCCCH-HHHHHHHHHHhC-CCEEEEEcCC-CCCCCCCccccccccccccCCHHHHHHHHHHHHH---HhCC
Confidence 46788888877765 468889998876 4999999995 5554322110000000000111222333333433 3356
Q ss_pred CcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC------------------------------------------
Q 025027 136 SAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------------------------ 171 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------------------------------------ 171 (259)
++++|+||||||.+++.++ .+| ++++++++++....
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhc
Confidence 7999999999999999988 444 78888877543100
Q ss_pred ------------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcC-------
Q 025027 172 ------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAK------- 208 (259)
Q Consensus 172 ------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~------- 208 (259)
.+.+.++++|+|+++|++|.+++ +....+.+.++..
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~ 1603 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDK 1603 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccc
Confidence 01234567899999999999875 5666677766321
Q ss_pred CCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 209 PKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 209 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
....+++++++++||.... +..+.+.+.+.+||++.-
T Consensus 1604 ~~~~a~lvvI~~aGH~~~l----------E~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1604 GKEIIEIVEIPNCGHAVHL----------ENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred cccceEEEEECCCCCchHH----------HCHHHHHHHHHHHHHhcc
Confidence 0012588999999997654 234789999999998743
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.56 E-value=2.3e-13 Score=120.37 Aligned_cols=174 Identities=17% Similarity=0.182 Sum_probs=119.6
Q ss_pred CceEeee-CCeeeEEeCCCC---CCeeEEEEeccCCCCc----hhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcch
Q 025027 36 AGTVTEL-GGLKAYVTGPPH---SKKAVLMISDIYGDEP----PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDK 107 (259)
Q Consensus 36 ~g~~~~~-~~~~~~~~~~~~---~~~~vil~~~~~g~~~----~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~ 107 (259)
.|.++-- +-++++.+.|.. .++|||++|+...... ..-+++++.|.++||.|+++|++ |.+.+...
T Consensus 164 pg~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwr-gpg~s~~~----- 237 (532)
T TIGR01838 164 PGAVVFENELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWR-NPDASQAD----- 237 (532)
T ss_pred CCeEEEECCcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECC-CCCccccc-----
Confidence 3455544 447777777653 3478999998765321 01157999999999999999995 43322111
Q ss_pred hhhhhccCCCcc-cccHHHHHHHHHHc-CCCcEEEEeechhHHHHHH-----HhcC-c-ccceEEEecCCCCC-------
Q 025027 108 DTWRKNHTTDKG-YEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVK-----LASN-Q-DVQAAVLLHPSNVT------- 171 (259)
Q Consensus 108 ~~~~~~~~~~~~-~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~-----~a~~-~-~i~~~i~~~~~~~~------- 171 (259)
.+.++. .+.+.++++.+.+. +.++++++|||+||.++.. .+.. + ++++++++......
T Consensus 238 ------~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~ 311 (532)
T TIGR01838 238 ------KTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELG 311 (532)
T ss_pred ------CChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhh
Confidence 011122 24577788888754 6789999999999998632 2333 3 68988886643221
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 312 ~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~l 391 (532)
T TIGR01838 312 VFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNL 391 (532)
T ss_pred hhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHH
Confidence
Q ss_pred ----------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 ----------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 ----------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
..++.++++|+|+++|++|.++|.+.+..+.+.+. ..+..+++++||...
T Consensus 392 y~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 392 YLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAG 457 (532)
T ss_pred HhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchH
Confidence 23567789999999999999999999998888763 234567888999764
No 82
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.56 E-value=4e-14 Score=111.88 Aligned_cols=115 Identities=18% Similarity=0.233 Sum_probs=88.0
Q ss_pred CeeeEEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccccc
Q 025027 44 GLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 122 (259)
Q Consensus 44 ~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 122 (259)
.++.|+..|..+..++++++||.|...-.|..++.++.++ ...|+++|+| |++...-..+.+ .+.+....|
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlR-gHGeTk~~~e~d-------lS~eT~~KD 132 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLR-GHGETKVENEDD-------LSLETMSKD 132 (343)
T ss_pred eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeecc-ccCccccCChhh-------cCHHHHHHH
Confidence 4889998887666678888888887777889999999988 6888999995 655433222222 234677789
Q ss_pred HHHHHHHHHHcCCCcEEEEeechhHHHHHHHhc---CcccceEEEec
Q 025027 123 AKPVIAALKAKGVSAVGAAGFCWGGKVAVKLAS---NQDVQAAVLLH 166 (259)
Q Consensus 123 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~---~~~i~~~i~~~ 166 (259)
+.++++.+-...+.+|+|+||||||.++...+. -|.+.+++.+.
T Consensus 133 ~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 133 FGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 999999998666678999999999999998773 25677777643
No 83
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.55 E-value=1.2e-12 Score=109.20 Aligned_cols=188 Identities=17% Similarity=0.211 Sum_probs=135.8
Q ss_pred eeCCeeeEEeCCC--C---CCeeEEEEeccCC----CCchhHHHHHHHHHhc-CCEEEeeccC--CCCCCCCCCCCcchh
Q 025027 41 ELGGLKAYVTGPP--H---SKKAVLMISDIYG----DEPPIYRSVADKVAGA-GFLVVAPDFF--HGDAANPSNPKYDKD 108 (259)
Q Consensus 41 ~~~~~~~~~~~~~--~---~~~~vil~~~~~g----~~~~~~~~~a~~la~~-G~~v~~~d~~--~g~~~~~~~~~~~~~ 108 (259)
..+++...++.|. . ..|.+|++|||.- .....|..++.+++++ +..|+++||| ..+.
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~----------- 138 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP----------- 138 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----------
Confidence 4466555555543 2 3466777776632 2356889999999766 9999999996 1221
Q ss_pred hhhhccCCCcccccHHHHHHHHHHc-------CCCcEEEEeechhHHHHHHHh---c-----CcccceEEEecCCCCC--
Q 025027 109 TWRKNHTTDKGYEDAKPVIAALKAK-------GVSAVGAAGFCWGGKVAVKLA---S-----NQDVQAAVLLHPSNVT-- 171 (259)
Q Consensus 109 ~~~~~~~~~~~~~d~~~~i~~l~~~-------~~~~i~l~G~S~Gg~~a~~~a---~-----~~~i~~~i~~~~~~~~-- 171 (259)
+....+|.-+++.|+.++ |..|+.|+|-|.||.+|..++ . .+++++.|+++|.+..
T Consensus 139 -------~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 139 -------FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred -------CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 234456777777776553 778999999999999999987 1 2589999999987532
Q ss_pred -------------------------------------------hh-----hhhccC-CcEEEeecCCCCCCChHHHHHHH
Q 025027 172 -------------------------------------------ED-----EIKAVK-VPIAVLGAERDNGLPPAQMKRFD 202 (259)
Q Consensus 172 -------------------------------------------~~-----~~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~ 202 (259)
.. +..... .|++++.++.|.+ .++...+.
T Consensus 212 ~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L--~D~~~~Y~ 289 (336)
T KOG1515|consen 212 RTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVL--RDEGLAYA 289 (336)
T ss_pred CCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhh--hhhhHHHH
Confidence 00 011122 2599999999998 47889999
Q ss_pred HHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 203 EILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 203 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+.| .+.|+++++..++++.|+|..-... .+.+.+..+.+.+|+++.
T Consensus 290 ~~L-kk~Gv~v~~~~~e~~~H~~~~~~~~-----~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 290 EKL-KKAGVEVTLIHYEDGFHGFHILDPS-----SKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHH-HHcCCeEEEEEECCCeeEEEecCCc-----hhhHHHHHHHHHHHHhhc
Confidence 999 6678899988999999999654433 245788999999999864
No 84
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.55 E-value=2.9e-13 Score=129.58 Aligned_cols=198 Identities=15% Similarity=0.150 Sum_probs=129.4
Q ss_pred CceEe-eeCCeeeEEeCCCC-------CCeeEEEEeccCCCCchhHHH-----HHHHHHhcCCEEEeeccCCCCCCCCCC
Q 025027 36 AGTVT-ELGGLKAYVTGPPH-------SKKAVLMISDIYGDEPPIYRS-----VADKVAGAGFLVVAPDFFHGDAANPSN 102 (259)
Q Consensus 36 ~g~~~-~~~~~~~~~~~~~~-------~~~~vil~~~~~g~~~~~~~~-----~a~~la~~G~~v~~~d~~~g~~~~~~~ 102 (259)
.+.++ ..+.++++.+.|.. .+++||++|++.... ..|.. +.+.|.++||.|+++|+ |.+.....
T Consensus 39 p~~vv~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~--G~~~~~~~ 115 (994)
T PRK07868 39 PFQIVESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF--GSPDKVEG 115 (994)
T ss_pred CCcEEEEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC--CCCChhHc
Confidence 34555 44557777776643 346888888865543 34443 47899999999999996 44322111
Q ss_pred CCcchhhhhhccCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhc-C-c-ccceEEEecCCC----------
Q 025027 103 PKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLAS-N-Q-DVQAAVLLHPSN---------- 169 (259)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~-~-~-~i~~~i~~~~~~---------- 169 (259)
. ...+..+.+..+.++++.++....+++.++||||||.+++.++. + + ++++++++....
T Consensus 116 ~--------~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~ 187 (994)
T PRK07868 116 G--------MERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGI 187 (994)
T ss_pred C--------ccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccc
Confidence 0 00112222334455555554444568999999999999988762 3 3 688887622110
Q ss_pred ------C---------------C---------------------------------------------------------
Q 025027 170 ------V---------------T--------------------------------------------------------- 171 (259)
Q Consensus 170 ------~---------------~--------------------------------------------------------- 171 (259)
. +
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~ 267 (994)
T PRK07868 188 PAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAIS 267 (994)
T ss_pred hhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHH
Confidence 0 0
Q ss_pred ----------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceE-EecCCCCcccccc
Q 025027 172 ----------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLV-KTYPGVCHGWTVR 228 (259)
Q Consensus 172 ----------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~H~~~~~ 228 (259)
...+.++++|+|+++|++|.++|++..+.+.+.++ ..++ ..++++||.-..-
T Consensus 268 ~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----~a~~~~~~~~~GH~g~~~ 342 (994)
T PRK07868 268 ELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-----NAEVYESLIRAGHFGLVV 342 (994)
T ss_pred HHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEEeCCCCCEeeee
Confidence 00246778899999999999999999999988763 2233 4667789965433
Q ss_pred CCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 229 YFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
+. .+.++.|..+.+||+++..
T Consensus 343 g~-------~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 343 GS-------RAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred ch-------hhhhhhChHHHHHHHHhcc
Confidence 33 3568999999999998753
No 85
>PRK05855 short chain dehydrogenase; Validated
Probab=99.54 E-value=1.8e-13 Score=124.28 Aligned_cols=191 Identities=14% Similarity=0.167 Sum_probs=120.9
Q ss_pred ceEeeeCCeeeEEeCCC-CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccC
Q 025027 37 GTVTELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 115 (259)
Q Consensus 37 g~~~~~~~~~~~~~~~~-~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 115 (259)
..++..++.++++.... ...++||++||+.+.. ..|..+.+.| .+||.|+++|++ |+|.+...... ..++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~-~~w~~~~~~L-~~~~~Vi~~D~~-G~G~S~~~~~~------~~~~ 75 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH-EVWDGVAPLL-ADRFRVVAYDVR-GAGRSSAPKRT------AAYT 75 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchH-HHHHHHHHHh-hcceEEEEecCC-CCCCCCCCCcc------cccC
Confidence 34567788777765433 2356788888876654 5788899999 568999999995 66544321110 0122
Q ss_pred CCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcCc----ccceEEEecCCCC---------------------
Q 025027 116 TDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSNV--------------------- 170 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~i~~~~~~~--------------------- 170 (259)
.+...+|+..+++.+. ...++.|+||||||.+++.++..+ ++...+...+...
T Consensus 76 ~~~~a~dl~~~i~~l~--~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 76 LARLADDFAAVIDAVS--PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHHHHHhC--CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhH
Confidence 3455567777777653 223599999999999998776332 2222222111000
Q ss_pred ------------------------------------C-----------------------------------hhhhhccC
Q 025027 171 ------------------------------------T-----------------------------------EDEIKAVK 179 (259)
Q Consensus 171 ------------------------------------~-----------------------------------~~~~~~~~ 179 (259)
. ......++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTD 233 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCcc
Confidence 0 00011268
Q ss_pred CcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 180 VPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 180 ~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
+|+++++|++|.++|++....+.+.++ ..++.+++ ++|....+ ..+.+.+.+.+|+.+.
T Consensus 234 ~P~lii~G~~D~~v~~~~~~~~~~~~~-----~~~~~~~~-~gH~~~~e----------~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPALYDDLSRWVP-----RLWRREIK-AGHWLPMS----------HPQVLAAAVAEFVDAV 292 (582)
T ss_pred CceEEEEeCCCcccCHHHhccccccCC-----cceEEEcc-CCCcchhh----------ChhHHHHHHHHHHHhc
Confidence 899999999999999888877766542 34666777 58966432 2367788888888763
No 86
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.54 E-value=9.6e-13 Score=105.15 Aligned_cols=181 Identities=19% Similarity=0.198 Sum_probs=120.2
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc----
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK---- 133 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~---- 133 (259)
+|+++.||++....+|..+.+++|++||+|+.+|++ ..... . ....++++.++++|+.+.
T Consensus 18 PVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~-~~~~~-~--------------~~~~~~~~~~vi~Wl~~~L~~~ 81 (259)
T PF12740_consen 18 PVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLY-SIGGP-D--------------DTDEVASAAEVIDWLAKGLESK 81 (259)
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEeccc-ccCCC-C--------------cchhHHHHHHHHHHHHhcchhh
Confidence 466666667777788999999999999999999974 21110 0 112235677778886542
Q ss_pred -------CCCcEEEEeechhHHHHHHHhcC-------cccceEEEecCCCCC------------h-hhhhccCCcEEEee
Q 025027 134 -------GVSAVGAAGFCWGGKVAVKLASN-------QDVQAAVLLHPSNVT------------E-DEIKAVKVPIAVLG 186 (259)
Q Consensus 134 -------~~~~i~l~G~S~Gg~~a~~~a~~-------~~i~~~i~~~~~~~~------------~-~~~~~~~~Pvl~i~ 186 (259)
|..+|+|+|||.||-+++.++.. .++++++++.|.... . ....+...|++++-
T Consensus 82 l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~~~P~lviG 161 (259)
T PF12740_consen 82 LPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDFSMPALVIG 161 (259)
T ss_pred ccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCcccccCCCCCeEEEe
Confidence 44699999999999999997722 379999999987521 0 11122458999998
Q ss_pred cCCCC---------CCCh-HHHHHHHHHHhcCCCCCceEEecCCCCccccccCCC-C-------------Ch-hhhhHHH
Q 025027 187 AERDN---------GLPP-AQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFV-N-------------DT-FAVNSAA 241 (259)
Q Consensus 187 g~~D~---------~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~-~-------------~~-~~~~~~~ 241 (259)
...+. ..|. ....++++..+ . +....+.++.||.-..+... . .+ .......
T Consensus 162 tGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~---~-p~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~ 237 (259)
T PF12740_consen 162 TGLGGEPRNPLFPPCAPAGVNYREFFDECK---P-PSWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRR 237 (259)
T ss_pred cccCcccccccCCCCCCCCCCHHHHHHhcC---C-CEEEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHH
Confidence 77764 2232 45667777762 1 45666778899965443330 0 00 1114456
Q ss_pred HHHHHHHHHHHHhhhcC
Q 025027 242 EAHEDMINWFEKHVKCD 258 (259)
Q Consensus 242 ~~~~~~~~fl~~~~~~~ 258 (259)
-..-.+..||+..+.++
T Consensus 238 f~~g~~vAfl~~~l~g~ 254 (259)
T PF12740_consen 238 FVGGIMVAFLNAQLQGD 254 (259)
T ss_pred HHHHHHHHHHHHHhcCc
Confidence 66677889999888754
No 87
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.53 E-value=4.2e-14 Score=117.70 Aligned_cols=172 Identities=20% Similarity=0.220 Sum_probs=90.5
Q ss_pred eeeEEeCCCC---CCeeEEEEeccCCCCc-----------------hhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCCC
Q 025027 45 LKAYVTGPPH---SKKAVLMISDIYGDEP-----------------PIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNP 103 (259)
Q Consensus 45 ~~~~~~~~~~---~~~~vil~~~~~g~~~-----------------~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~ 103 (259)
+++|+..|++ +-|+||++|+..+.+. +.-..++.+|+++||+|+++|.. .|.-...+..
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~ 180 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGA 180 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCC
T ss_pred EEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccccccc
Confidence 7888887775 2366777775433210 01134689999999999999996 3432221111
Q ss_pred C-------cchhhhhhccC--C-CcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEecC--
Q 025027 104 K-------YDKDTWRKNHT--T-DKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHP-- 167 (259)
Q Consensus 104 ~-------~~~~~~~~~~~--~-~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~-- 167 (259)
. ..+..++.... . -...-|...++++|.++ +++||+++|||+||..++.++ .+++|++.+..+-
T Consensus 181 ~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~l~ 260 (390)
T PF12715_consen 181 AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGYLC 260 (390)
T ss_dssp TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-B-
T ss_pred ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHhHhhhhhhh
Confidence 1 01111111111 1 11223445588998876 678999999999999999987 7789988875321
Q ss_pred -----------------------------CCCChhhhhcc-----CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCc
Q 025027 168 -----------------------------SNVTEDEIKAV-----KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDH 213 (259)
Q Consensus 168 -----------------------------~~~~~~~~~~~-----~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 213 (259)
.+...-++..| ..|+|++.|.+|..+|. .+..++.. . ...++
T Consensus 261 ~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~-~-~p~n~ 336 (390)
T PF12715_consen 261 TTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIM-G-APDNF 336 (390)
T ss_dssp -HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHT-T--GGGE
T ss_pred ccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhc-C-CCcce
Confidence 00001112222 55999999999987753 55555544 2 23367
Q ss_pred eEEecCC
Q 025027 214 LVKTYPG 220 (259)
Q Consensus 214 ~~~~~~g 220 (259)
+++.||+
T Consensus 337 ~~~~~p~ 343 (390)
T PF12715_consen 337 QIHHYPK 343 (390)
T ss_dssp EE---GG
T ss_pred EEeeccc
Confidence 8888886
No 88
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.52 E-value=1.8e-12 Score=105.61 Aligned_cols=169 Identities=17% Similarity=0.177 Sum_probs=110.5
Q ss_pred eeeEEeCCCCC--CeeEEEEeccCCCC---chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcc
Q 025027 45 LKAYVTGPPHS--KKAVLMISDIYGDE---PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 119 (259)
Q Consensus 45 ~~~~~~~~~~~--~~~vil~~~~~g~~---~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 119 (259)
+-.++..|... +++||++|+..+.. ...+..+++.|+++||.|+.+|++ |++.+...... ...+..
T Consensus 12 ~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~-G~G~S~g~~~~--------~~~~~~ 82 (266)
T TIGR03101 12 RFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLY-GCGDSAGDFAA--------ARWDVW 82 (266)
T ss_pred EEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCC-CCCCCCCcccc--------CCHHHH
Confidence 33444445432 45677777644321 234566899999999999999995 56544322111 112344
Q ss_pred cccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cC-cccceEEEecCCCCC--------------------------
Q 025027 120 YEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVT-------------------------- 171 (259)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~-~~i~~~i~~~~~~~~-------------------------- 171 (259)
.+|+..+++++++.+..+|+++||||||.+++.++ .+ .+++++|+.+|....
T Consensus 83 ~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~~~~ 162 (266)
T TIGR03101 83 KEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAEASN 162 (266)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccccccch
Confidence 57889999999877778999999999999999987 44 478889998875321
Q ss_pred --------------------h---h-----hhhc---cCCcEEEeecCC--CCCCChHHHHHHHHHHhcCCCCCceEEec
Q 025027 172 --------------------E---D-----EIKA---VKVPIAVLGAER--DNGLPPAQMKRFDEILSAKPKFDHLVKTY 218 (259)
Q Consensus 172 --------------------~---~-----~~~~---~~~Pvl~i~g~~--D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (259)
. . ++.. -..+++++--+. |.- .......+.+.+ .+.|++++...+
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~-~~~g~~v~~~~~ 240 (266)
T TIGR03101 163 SLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGAT-LSPVFSRLGEQW-VQSGVEVTVDLV 240 (266)
T ss_pred hHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCC-CCHHHHHHHHHH-HHcCCeEeeeec
Confidence 0 0 1111 144677776643 333 235667777777 567889999999
Q ss_pred CCCCcccc
Q 025027 219 PGVCHGWT 226 (259)
Q Consensus 219 ~g~~H~~~ 226 (259)
+|- .|.
T Consensus 241 ~~~--~~~ 246 (266)
T TIGR03101 241 PGP--AFW 246 (266)
T ss_pred CCc--hhh
Confidence 974 553
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.52 E-value=4.8e-13 Score=123.64 Aligned_cols=162 Identities=17% Similarity=0.229 Sum_probs=117.3
Q ss_pred HHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-----------------CCCc
Q 025027 75 SVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-----------------GVSA 137 (259)
Q Consensus 75 ~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-----------------~~~~ 137 (259)
.+.+.|+++||+|+..|.| |.+.+.+.... ......+|..++|+|+..+ ...+
T Consensus 270 ~~~~~~~~rGYaVV~~D~R-Gtg~SeG~~~~---------~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGk 339 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGI-GTRGSDGCPTT---------GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGK 339 (767)
T ss_pred hHHHHHHhCCeEEEEEcCC-CCCCCCCcCcc---------CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCe
Confidence 4668999999999999995 54433332110 0133457999999999843 1469
Q ss_pred EEEEeechhHHHHHHHhc--CcccceEEEecCCCCC--------------------------------------------
Q 025027 138 VGAAGFCWGGKVAVKLAS--NQDVQAAVLLHPSNVT-------------------------------------------- 171 (259)
Q Consensus 138 i~l~G~S~Gg~~a~~~a~--~~~i~~~i~~~~~~~~-------------------------------------------- 171 (259)
|+++|.|+||.+++.+|. .+.++++|...+....
T Consensus 340 VGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~ 419 (767)
T PRK05371 340 VAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEA 419 (767)
T ss_pred eEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHH
Confidence 999999999999998773 4688888885432100
Q ss_pred ----------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCc
Q 025027 172 ----------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCH 223 (259)
Q Consensus 172 ----------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 223 (259)
...+.++++|+|++||.+|..++++...++++.++. .+.+.++.+.++ +|
T Consensus 420 ~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~-~g~pkkL~l~~g-~H 497 (767)
T PRK05371 420 CEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPE-NGVPKKLFLHQG-GH 497 (767)
T ss_pred HHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHh-cCCCeEEEEeCC-Cc
Confidence 012346789999999999999999999999999854 355677777775 88
Q ss_pred cccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 224 GWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
...... ...+..+.+.+||.++|++
T Consensus 498 ~~~~~~---------~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 498 VYPNNW---------QSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred cCCCch---------hHHHHHHHHHHHHHhcccc
Confidence 653321 1367788999999999874
No 90
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=6.5e-13 Score=115.49 Aligned_cols=194 Identities=15% Similarity=0.161 Sum_probs=136.3
Q ss_pred eeeEEeCCC-----CCCeeEEEEeccCCCC--chhHHH----HHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhc
Q 025027 45 LKAYVTGPP-----HSKKAVLMISDIYGDE--PPIYRS----VADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN 113 (259)
Q Consensus 45 ~~~~~~~~~-----~~~~~vil~~~~~g~~--~~~~~~----~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 113 (259)
+-+.+.+|. .+.|.++.+.||.+-. .+.|.. -..+||+.||.|+.+|-|+...+. -.+..+++.
T Consensus 626 lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRG-----lkFE~~ik~ 700 (867)
T KOG2281|consen 626 LYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRG-----LKFESHIKK 700 (867)
T ss_pred EEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccc-----hhhHHHHhh
Confidence 334445554 3347899999998832 011111 235799999999999996433322 234566666
Q ss_pred cCCCcccccHHHHHHHHHHc----CCCcEEEEeechhHHHHHHH-hcCcc-cceEEEecCCCCC----------------
Q 025027 114 HTTDKGYEDAKPVIAALKAK----GVSAVGAAGFCWGGKVAVKL-ASNQD-VQAAVLLHPSNVT---------------- 171 (259)
Q Consensus 114 ~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~-a~~~~-i~~~i~~~~~~~~---------------- 171 (259)
..-.-.++|-...+++|..+ +.+||++.|||+||+++++. +++|+ +++.|+-+|.-..
T Consensus 701 kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~ 780 (867)
T KOG2281|consen 701 KMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPD 780 (867)
T ss_pred ccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCCc
Confidence 65566667777778888765 67899999999999999995 47775 5666664443110
Q ss_pred --------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhh
Q 025027 172 --------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAV 237 (259)
Q Consensus 172 --------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 237 (259)
.+.++.-...++++||--|+-|.-.....+..++ .+.|++.++.+||+-.|+.-+....
T Consensus 781 ~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~l-vkagKpyeL~IfP~ERHsiR~~es~------ 853 (867)
T KOG2281|consen 781 NNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSAL-VKAGKPYELQIFPNERHSIRNPESG------ 853 (867)
T ss_pred cchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHH-HhCCCceEEEEccccccccCCCccc------
Confidence 1223444557999999999999888888888888 5577799999999999988554333
Q ss_pred hHHHHHHHHHHHHHHH
Q 025027 238 NSAAEAHEDMINWFEK 253 (259)
Q Consensus 238 ~~~~~~~~~~~~fl~~ 253 (259)
+..-..++.||++
T Consensus 854 ---~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 854 ---IYYEARLLHFLQE 866 (867)
T ss_pred ---hhHHHHHHHHHhh
Confidence 6777788888876
No 91
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=4.7e-13 Score=123.37 Aligned_cols=202 Identities=16% Similarity=0.196 Sum_probs=135.3
Q ss_pred eeCCeeeEE--eCCC-----CCCeeEEEEeccCCCC---chhHHHHHHH-HHhcCCEEEeeccCCCCCCCCCCCCcchhh
Q 025027 41 ELGGLKAYV--TGPP-----HSKKAVLMISDIYGDE---PPIYRSVADK-VAGAGFLVVAPDFFHGDAANPSNPKYDKDT 109 (259)
Q Consensus 41 ~~~~~~~~~--~~~~-----~~~~~vil~~~~~g~~---~~~~~~~a~~-la~~G~~v~~~d~~~g~~~~~~~~~~~~~~ 109 (259)
.++++..++ ..|+ .+-|.++..|||+++. ......+... ....|+.|+.+|.|+..+...+ +..
T Consensus 504 ~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~-----~~~ 578 (755)
T KOG2100|consen 504 EIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWD-----FRS 578 (755)
T ss_pred EeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchh-----HHH
Confidence 336655543 3554 2235677777777621 1122334444 4455999999999632222211 111
Q ss_pred hhhccCCCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc--ccceEEEecCCCCC------------
Q 025027 110 WRKNHTTDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ--DVQAAVLLHPSNVT------------ 171 (259)
Q Consensus 110 ~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~--~i~~~i~~~~~~~~------------ 171 (259)
...+.--...++|...++.++.+. |.+||+|+|+|+||.+++.++ .++ -+++.++.+|....
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terym 658 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYM 658 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhc
Confidence 111111233446666666666654 778999999999999999977 443 46777888876331
Q ss_pred ---------------hhhhhccCCcE-EEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChh
Q 025027 172 ---------------EDEIKAVKVPI-AVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTF 235 (259)
Q Consensus 172 ---------------~~~~~~~~~Pv-l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 235 (259)
......++.|. |++||+.|.-|+.+....+.++| ...|++++..+||+.+|++......
T Consensus 659 g~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL-~~~gv~~~~~vypde~H~is~~~~~---- 733 (755)
T KOG2100|consen 659 GLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKAL-QNAGVPFRLLVYPDENHGISYVEVI---- 733 (755)
T ss_pred CCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHH-HHCCCceEEEEeCCCCcccccccch----
Confidence 11234445555 99999999999999999999999 5678899999999999999765433
Q ss_pred hhhHHHHHHHHHHHHHHHhhhc
Q 025027 236 AVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 236 ~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
......+..||+.++..
T Consensus 734 -----~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 734 -----SHLYEKLDRFLRDCFGS 750 (755)
T ss_pred -----HHHHHHHHHHHHHHcCc
Confidence 78899999999977653
No 92
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.52 E-value=9.3e-14 Score=109.99 Aligned_cols=149 Identities=24% Similarity=0.289 Sum_probs=106.0
Q ss_pred EEEEeccCCC--CchhHHHHHHHHHh-cCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc--
Q 025027 59 VLMISDIYGD--EPPIYRSVADKVAG-AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-- 133 (259)
Q Consensus 59 vil~~~~~g~--~~~~~~~~a~~la~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-- 133 (259)
||++|||.-. .......++..+++ .|+.|+.+|||-. ++ ..+...++|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p~------------~~~p~~~~D~~~a~~~l~~~~~ 64 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----PE------------APFPAALEDVKAAYRWLLKNAD 64 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----TT------------SSTTHHHHHHHHHHHHHHHTHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----cc------------ccccccccccccceeeeccccc
Confidence 6788876431 22344667888886 7999999999611 11 12456678999999999865
Q ss_pred ----CCCcEEEEeechhHHHHHHHhc------CcccceEEEecCCCCC--------------------------------
Q 025027 134 ----GVSAVGAAGFCWGGKVAVKLAS------NQDVQAAVLLHPSNVT-------------------------------- 171 (259)
Q Consensus 134 ----~~~~i~l~G~S~Gg~~a~~~a~------~~~i~~~i~~~~~~~~-------------------------------- 171 (259)
+.++|+|+|+|.||.+++.++. .+.++++++++|....
T Consensus 65 ~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (211)
T PF07859_consen 65 KLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLY 144 (211)
T ss_dssp HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHH
T ss_pred cccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccc
Confidence 4679999999999999999882 2468999999986311
Q ss_pred ----hh---h---h-h-cc--CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 ----ED---E---I-K-AV--KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 ----~~---~---~-~-~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
.. . + . .. -.|+++++|+.|.++ +....+.+.++ +.|+++++++++|..|+|.
T Consensus 145 ~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~-~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 145 LPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLK-KAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHH-HTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHH-HCCCCEEEEEECCCeEEee
Confidence 00 0 0 0 11 238999999999875 57788999995 5788999999999999884
No 93
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.49 E-value=2.4e-13 Score=112.52 Aligned_cols=165 Identities=22% Similarity=0.262 Sum_probs=115.2
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCC-CCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGD-AANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK- 133 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~- 133 (259)
..|||++.|+.|.....+.++++.+++.||.|..+++.+.. +..+...... .. ......-++..|+..++++|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~-~~-~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGP-GS-YAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCC-cc-cchhhhhcccccHHHHHHHHHHhh
Confidence 45788999999988888999999999999999999995211 1111100000 00 00011235568999999998765
Q ss_pred ---------CCCcEEEEeechhHHHHHHHhc----------------------------------------------Ccc
Q 025027 134 ---------GVSAVGAAGFCWGGKVAVKLAS----------------------------------------------NQD 158 (259)
Q Consensus 134 ---------~~~~i~l~G~S~Gg~~a~~~a~----------------------------------------------~~~ 158 (259)
+..+|+++|||+||++++.++. +++
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpr 227 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPR 227 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhcccccc
Confidence 3579999999999999999872 357
Q ss_pred cceEEEecCCCC---ChhhhhccCCcEEEeecCCCCCCCh-HHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 159 VQAAVLLHPSNV---TEDEIKAVKVPIAVLGAERDNGLPP-AQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 159 i~~~i~~~~~~~---~~~~~~~~~~Pvl~i~g~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
|+++++..|... ....+.+++.|++++.|..|.+.|. ......+..+ .+....+...+++.|.-
T Consensus 228 iravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l---~g~~k~~~~vp~a~h~s 295 (365)
T COG4188 228 IRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL---PGALKYLRLVPGATHFS 295 (365)
T ss_pred ceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccC---CcchhheeecCCCcccc
Confidence 888888777543 2456788999999999999997664 3444444444 33334677888899943
No 94
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=1.8e-12 Score=105.62 Aligned_cols=175 Identities=19% Similarity=0.272 Sum_probs=124.5
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
.+.|+++++||.+|+. ..|+.+++.|+++ |-.|+++|.| -+|.++... .+++....+|+..+++....
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~R-nHG~Sp~~~---------~h~~~~ma~dv~~Fi~~v~~ 118 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVR-NHGSSPKIT---------VHNYEAMAEDVKLFIDGVGG 118 (315)
T ss_pred CCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecc-cCCCCcccc---------ccCHHHHHHHHHHHHHHccc
Confidence 4568899999999998 4689999999988 8999999996 444443322 23356667888888888864
Q ss_pred c-CCCcEEEEeechhH-HHHHHHh-cCc-ccceEEEec--CCCCC-----------------------------------
Q 025027 133 K-GVSAVGAAGFCWGG-KVAVKLA-SNQ-DVQAAVLLH--PSNVT----------------------------------- 171 (259)
Q Consensus 133 ~-~~~~i~l~G~S~Gg-~~a~~~a-~~~-~i~~~i~~~--~~~~~----------------------------------- 171 (259)
. ...++.|+|||||| .+++..+ ..| .+..+|... |....
T Consensus 119 ~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 119 STRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred ccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 3 35689999999999 3333333 223 344444321 21000
Q ss_pred ---------------------------------------------hhhh--hccCCcEEEeecCCCCCCChHHHHHHHHH
Q 025027 172 ---------------------------------------------EDEI--KAVKVPIAVLGAERDNGLPPAQMKRFDEI 204 (259)
Q Consensus 172 ---------------------------------------------~~~~--~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~ 204 (259)
..++ .....|+|+++|.+++.+|.+....+...
T Consensus 199 ~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~ 278 (315)
T KOG2382|consen 199 VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKI 278 (315)
T ss_pred HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHh
Confidence 0011 33467999999999999999888888888
Q ss_pred HhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 205 LSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 205 l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
++ .++++.++++||+...+ ..+.+.+.+.+|+.++
T Consensus 279 fp-----~~e~~~ld~aGHwVh~E----------~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 279 FP-----NVEVHELDEAGHWVHLE----------KPEEFIESISEFLEEP 313 (315)
T ss_pred cc-----chheeecccCCceeecC----------CHHHHHHHHHHHhccc
Confidence 74 57899999999987542 3478999999988764
No 95
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.45 E-value=4.2e-12 Score=98.80 Aligned_cols=171 Identities=14% Similarity=0.274 Sum_probs=104.3
Q ss_pred eeeEEeCCCCC---CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccc
Q 025027 45 LKAYVTGPPHS---KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 121 (259)
Q Consensus 45 ~~~~~~~~~~~---~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (259)
+.++-..|... +.+.|++..|++..-..+..+|.+|+..||+|+.+|..+-.|.+.+. ....+......
T Consensus 15 I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~--------I~eftms~g~~ 86 (294)
T PF02273_consen 15 IRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD--------INEFTMSIGKA 86 (294)
T ss_dssp EEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------------HHHHHH
T ss_pred EEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC--------hhhcchHHhHH
Confidence 55555566532 33678888889977788999999999999999999986322322221 12223345568
Q ss_pred cHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC------------------------------
Q 025027 122 DAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT------------------------------ 171 (259)
Q Consensus 122 d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~------------------------------ 171 (259)
++..+++|++..+..+++|+.-|.-|.+|+..+.+.++.-+|...|....
T Consensus 87 sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~ 166 (294)
T PF02273_consen 87 SLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHN 166 (294)
T ss_dssp HHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEE
T ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcccccccc
Confidence 99999999998888999999999999999999987776666665543221
Q ss_pred ---------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 ---------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 ---------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
..+.+++++|++.+++++|..|......++.+.++. ..+.+..++|+.|.+.
T Consensus 167 l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s---~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 167 LGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINS---NKCKLYSLPGSSHDLG 239 (294)
T ss_dssp EEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEEEETT-SS-TT
T ss_pred cchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCC---CceeEEEecCccchhh
Confidence 235677899999999999999998888888887732 2677888999999873
No 96
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.44 E-value=5.8e-12 Score=97.20 Aligned_cols=184 Identities=22% Similarity=0.250 Sum_probs=127.7
Q ss_pred EEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCC-CCCCCCCCCC--cchhhhhhccCCCcccccHH
Q 025027 48 YVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFH-GDAANPSNPK--YDKDTWRKNHTTDKGYEDAK 124 (259)
Q Consensus 48 ~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~-g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 124 (259)
+.....++.+.-+++.+.+|...-.|+.+|...++.||.|++.|+|+ |.+......+ -.+- +-...|+.
T Consensus 21 ~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~--------DwA~~D~~ 92 (281)
T COG4757 21 QRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYL--------DWARLDFP 92 (281)
T ss_pred ccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchh--------hhhhcchH
Confidence 33333344456788888899887889999999999999999999962 2222222111 1122 44557999
Q ss_pred HHHHHHHHc-CCCcEEEEeechhHHHHHHHhcCcccceEEEecCCC--C-------------------------------
Q 025027 125 PVIAALKAK-GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSN--V------------------------------- 170 (259)
Q Consensus 125 ~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~--~------------------------------- 170 (259)
++++++++. ...+...+|||+||.+.-.+..+++..+...+.... .
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~ 172 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPK 172 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeecccccCcccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcH
Confidence 999999874 456899999999999887777776554444322110 0
Q ss_pred ---------C--------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceE
Q 025027 171 ---------T--------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLV 215 (259)
Q Consensus 171 ---------~--------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 215 (259)
+ .+.++.+++|+.++...+|+..|+...+.+.+.... .+.+.
T Consensus 173 ~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~n---Apl~~ 249 (281)
T COG4757 173 DLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRN---APLEM 249 (281)
T ss_pred hhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhc---Ccccc
Confidence 0 234678899999999999999999999999988743 25566
Q ss_pred EecCC----CCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 025027 216 KTYPG----VCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 216 ~~~~g----~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
+.++. .||.=..+ +..|..|+++++||
T Consensus 250 ~~~~~~~~~lGH~gyfR---------~~~Ealwk~~L~w~ 280 (281)
T COG4757 250 RDLPRAEGPLGHMGYFR---------EPFEALWKEMLGWF 280 (281)
T ss_pred eecCcccCcccchhhhc---------cchHHHHHHHHHhh
Confidence 65554 36632211 12378899999987
No 97
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=2.8e-11 Score=101.93 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=76.1
Q ss_pred CCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 55 SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 55 ~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
..|.||++||..|.. ..+.+.++.+..++||.|++++.| |.+..+-....-+ .....+|+.++++++++.
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~R-G~~g~~LtTpr~f--------~ag~t~Dl~~~v~~i~~~ 194 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHR-GLGGSKLTTPRLF--------TAGWTEDLREVVNHIKKR 194 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCC-CCCCCccCCCcee--------ecCCHHHHHHHHHHHHHh
Confidence 447899999988855 456778999999999999999995 5433322111111 123348999999999987
Q ss_pred -CCCcEEEEeechhHHHHHHHhcC-----cccceEEEecCCC
Q 025027 134 -GVSAVGAAGFCWGGKVAVKLASN-----QDVQAAVLLHPSN 169 (259)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a~~-----~~i~~~i~~~~~~ 169 (259)
+..++..+|+||||.+...+... |-+.|++..+|+.
T Consensus 195 ~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 195 YPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred CCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 55689999999999999997621 2455666666664
No 98
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.42 E-value=9.8e-12 Score=102.38 Aligned_cols=132 Identities=21% Similarity=0.236 Sum_probs=91.2
Q ss_pred HHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC--CCcEEEEeechhHHHHHHHhc--
Q 025027 80 VAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG--VSAVGAAGFCWGGKVAVKLAS-- 155 (259)
Q Consensus 80 la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~-- 155 (259)
|+++||+|+..|.| |.+.+....... .....+|..++|+|+..++ ..+|+++|.|++|.+.+.+|.
T Consensus 53 ~~~~GY~vV~~D~R-G~g~S~G~~~~~---------~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~ 122 (272)
T PF02129_consen 53 FAERGYAVVVQDVR-GTGGSEGEFDPM---------SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR 122 (272)
T ss_dssp HHHTT-EEEEEE-T-TSTTS-S-B-TT---------SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT
T ss_pred HHhCCCEEEEECCc-ccccCCCccccC---------ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC
Confidence 99999999999995 554443321110 2345589999999998873 359999999999999999884
Q ss_pred CcccceEEEecCCCCC----------------------------------------------------------------
Q 025027 156 NQDVQAAVLLHPSNVT---------------------------------------------------------------- 171 (259)
Q Consensus 156 ~~~i~~~i~~~~~~~~---------------------------------------------------------------- 171 (259)
+|.+++++...+....
T Consensus 123 ~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (272)
T PF02129_consen 123 PPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYW 202 (272)
T ss_dssp -TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHH
T ss_pred CCCceEEEecccCCcccccchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHH
Confidence 4689999986543211
Q ss_pred ------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCC-CCceEEecCCCCcc
Q 025027 172 ------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPK-FDHLVKTYPGVCHG 224 (259)
Q Consensus 172 ------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~ 224 (259)
...+.++++|+|++.|..|..+. ....+.++.++ +.+ .+.++++-| ..|.
T Consensus 203 ~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~-~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 203 DEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALR-APGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp HHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHC-TTSTC-EEEEEES-ESTT
T ss_pred HHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccCCcccc-hHHHHHHHHhh-cCCCCCCEEEEeC-CCCC
Confidence 11357789999999999997666 77778888884 344 455777766 4774
No 99
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.41 E-value=1.7e-11 Score=110.54 Aligned_cols=112 Identities=16% Similarity=0.144 Sum_probs=75.1
Q ss_pred eeeEEeCCCC--CCeeEEEEeccCCCCch----hHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCc
Q 025027 45 LKAYVTGPPH--SKKAVLMISDIYGDEPP----IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDK 118 (259)
Q Consensus 45 ~~~~~~~~~~--~~~~vil~~~~~g~~~~----~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 118 (259)
+.+++..|.. +.|+||++| +++.... .....+..|+++||.|+++|+| |.+.+.... .. .. ..
T Consensus 9 L~~~~~~P~~~~~~P~Il~~~-gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~R-G~g~S~g~~-~~-------~~-~~ 77 (550)
T TIGR00976 9 LAIDVYRPAGGGPVPVILSRT-PYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTR-GRGASEGEF-DL-------LG-SD 77 (550)
T ss_pred EEEEEEecCCCCCCCEEEEec-CCCCchhhccccccccHHHHHhCCcEEEEEecc-ccccCCCce-Ee-------cC-cc
Confidence 4444566653 335555555 4554321 2234567899999999999995 554443211 00 11 35
Q ss_pred ccccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHhc--CcccceEEEecC
Q 025027 119 GYEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLAS--NQDVQAAVLLHP 167 (259)
Q Consensus 119 ~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~--~~~i~~~i~~~~ 167 (259)
..+|+.++++|+.++ ...+|+++|+|+||.+++.++. .+++++++...+
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~ 130 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEG 130 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCc
Confidence 678999999999876 3369999999999999999884 357888887443
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.41 E-value=2.1e-12 Score=105.12 Aligned_cols=197 Identities=17% Similarity=0.249 Sum_probs=84.3
Q ss_pred ceEeeeCC-eeeEEeCCCC-CCeeEEEEeccCCC---CchhHHHHHHHHHhcCCEEEeeccCC-CCCCCCCCCCcchhhh
Q 025027 37 GTVTELGG-LKAYVTGPPH-SKKAVLMISDIYGD---EPPIYRSVADKVAGAGFLVVAPDFFH-GDAANPSNPKYDKDTW 110 (259)
Q Consensus 37 g~~~~~~~-~~~~~~~~~~-~~~~vil~~~~~g~---~~~~~~~~a~~la~~G~~v~~~d~~~-g~~~~~~~~~~~~~~~ 110 (259)
|.+..... +.+|-+.+.. ..+-+|++-||.++ +.++...+++.|.+.||.|+-+.+.. -.++...
T Consensus 11 G~lh~Y~~~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------- 81 (303)
T PF08538_consen 11 GILHHYTPKLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------- 81 (303)
T ss_dssp EEEEEECCTTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------
T ss_pred eEEEEECCCCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------
Confidence 66665544 4444444332 13434555555553 34678889999988899999998852 1122221
Q ss_pred hhccCCCcccccHHHHHHHHHHc-----CCCcEEEEeechhHHHHHHHh---c----CcccceEEEecCCCCC-------
Q 025027 111 RKNHTTDKGYEDAKPVIAALKAK-----GVSAVGAAGFCWGGKVAVKLA---S----NQDVQAAVLLHPSNVT------- 171 (259)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a---~----~~~i~~~i~~~~~~~~------- 171 (259)
+.++.++|+.++|++|++. +.++|+|+|||.|.--++.+. . .+.|+++|+-+|..+.
T Consensus 82 ----SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~ 157 (303)
T PF08538_consen 82 ----SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFL 157 (303)
T ss_dssp -----HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSH
T ss_pred ----hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcc
Confidence 1244568999999999987 467999999999999999987 2 2579999996664332
Q ss_pred -------------------------------------------------------------------hhhhhccCCcEEE
Q 025027 172 -------------------------------------------------------------------EDEIKAVKVPIAV 184 (259)
Q Consensus 172 -------------------------------------------------------------------~~~~~~~~~Pvl~ 184 (259)
...+..++.|+|+
T Consensus 158 ~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLv 237 (303)
T PF08538_consen 158 GEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLV 237 (303)
T ss_dssp HH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEE
T ss_pred cchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEE
Confidence 1235667889999
Q ss_pred eecCCCCCCCh-HHHHHHHHHHhcCCC---CCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 185 LGAERDNGLPP-AQMKRFDEILSAKPK---FDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 185 i~g~~D~~~~~-~~~~~~~~~l~~~~~---~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
+++++|+.+|+ -+.+.+.+.++...+ ....-.++|||.|.+..+... .+.+...+.+.+||+
T Consensus 238 l~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~------~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 238 LYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA------EAREWLVERVVKFLK 303 (303)
T ss_dssp EEE--TT-----------------------------------------------------------------
T ss_pred EecCCCceecccccccccccccccccccccccccccccccccccccccccc------cccccccccccccCC
Confidence 99999999985 344555565543222 122355889999988644333 234567777777774
No 101
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.40 E-value=2.5e-11 Score=95.09 Aligned_cols=151 Identities=14% Similarity=0.212 Sum_probs=104.9
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
..+.-++++++..|+. ..|+.+..+|-. .+.++.+++ .|++.... +....|+.++.+.+.+.
T Consensus 5 ~~~~~L~cfP~AGGsa-~~fr~W~~~lp~-~iel~avql-PGR~~r~~---------------ep~~~di~~Lad~la~e 66 (244)
T COG3208 5 GARLRLFCFPHAGGSA-SLFRSWSRRLPA-DIELLAVQL-PGRGDRFG---------------EPLLTDIESLADELANE 66 (244)
T ss_pred CCCceEEEecCCCCCH-HHHHHHHhhCCc-hhheeeecC-CCcccccC---------------CcccccHHHHHHHHHHH
Confidence 3445689999988876 578888887766 499999999 45543211 22335666666666543
Q ss_pred -----CCCcEEEEeechhHHHHHHHhcC-----cccceEEEecCCCCC--------------------------------
Q 025027 134 -----GVSAVGAAGFCWGGKVAVKLASN-----QDVQAAVLLHPSNVT-------------------------------- 171 (259)
Q Consensus 134 -----~~~~i~l~G~S~Gg~~a~~~a~~-----~~i~~~i~~~~~~~~-------------------------------- 171 (259)
..++.++.||||||.+++.++.. -..+++.........
T Consensus 67 l~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led 146 (244)
T COG3208 67 LLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLED 146 (244)
T ss_pred hccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcC
Confidence 23589999999999999999832 125555544322110
Q ss_pred -----------------hh-----hhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccc
Q 025027 172 -----------------ED-----EIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTV 227 (259)
Q Consensus 172 -----------------~~-----~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 227 (259)
.+ .-..+.+|+..+.|++|+.++.+....+.+..+ .+.++++++| +|.|.+
T Consensus 147 ~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~----~~f~l~~fdG-gHFfl~ 219 (244)
T COG3208 147 PELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK----GDFTLRVFDG-GHFFLN 219 (244)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc----CCceEEEecC-cceehh
Confidence 00 113568899999999999999888888888762 2789999996 998853
No 102
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.40 E-value=1.3e-11 Score=94.10 Aligned_cols=134 Identities=17% Similarity=0.177 Sum_probs=92.9
Q ss_pred EEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc---C
Q 025027 59 VLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK---G 134 (259)
Q Consensus 59 vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~---~ 134 (259)
|+++||..|+. .+++..+.+++... +.|-.+++. . -++..+++.+.+. .
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~--~------------------------P~~~~W~~~l~~~i~~~ 53 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD--N------------------------PDLDEWVQALDQAIDAI 53 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T--S--------------------------HHHHHHHHHHCCHC-
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC--C------------------------CCHHHHHHHHHHHHhhc
Confidence 57778777653 45777888999887 888877761 1 1345556666554 2
Q ss_pred CCcEEEEeechhHHHHHHHh-c--CcccceEEEecCCCCC-h------------hhhhccCCcEEEeecCCCCCCChHHH
Q 025027 135 VSAVGAAGFCWGGKVAVKLA-S--NQDVQAAVLLHPSNVT-E------------DEIKAVKVPIAVLGAERDNGLPPAQM 198 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a-~--~~~i~~~i~~~~~~~~-~------------~~~~~~~~Pvl~i~g~~D~~~~~~~~ 198 (259)
.+.++++|||+|+.+++.++ . ..+|+++++++|+... . ........|.+++.+++|+.+|.+..
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~a 133 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFERA 133 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHHH
T ss_pred CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHHH
Confidence 35699999999999999987 3 3489999999987642 1 01223456889999999999999999
Q ss_pred HHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 199 KRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 199 ~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
..+.+.+ ..++..++++||..
T Consensus 134 ~~~A~~l------~a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 134 QRLAQRL------GAELIILGGGGHFN 154 (171)
T ss_dssp HHHHHHH------T-EEEEETS-TTSS
T ss_pred HHHHHHc------CCCeEECCCCCCcc
Confidence 9999999 45789999999944
No 103
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.40 E-value=1.3e-11 Score=108.42 Aligned_cols=173 Identities=16% Similarity=0.123 Sum_probs=121.5
Q ss_pred CCceEeeeCC-eeeEEeCCCC---CCeeEEEEeccCCCC----chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcc
Q 025027 35 GAGTVTELGG-LKAYVTGPPH---SKKAVLMISDIYGDE----PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYD 106 (259)
Q Consensus 35 ~~g~~~~~~~-~~~~~~~~~~---~~~~vil~~~~~g~~----~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~ 106 (259)
..|.++--++ ++++.+.|.. -++|+|+++...... -..-+++.++|.++||.|+++|++. +... .
T Consensus 190 TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~n--P~~~-~---- 262 (560)
T TIGR01839 190 TEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRN--PDKA-H---- 262 (560)
T ss_pred CCCceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCC--CChh-h----
Confidence 3456664444 7777777643 236788888765421 0112689999999999999999842 2110 0
Q ss_pred hhhhhhccCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHH----Hh-cCc--ccceEEEecCCCCC-------
Q 025027 107 KDTWRKNHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVK----LA-SNQ--DVQAAVLLHPSNVT------- 171 (259)
Q Consensus 107 ~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~----~a-~~~--~i~~~i~~~~~~~~------- 171 (259)
...+.++.++.+.++++.++.. +.++|.++|+|+||.++.. ++ .++ +|+.++++....+.
T Consensus 263 -----r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~ 337 (560)
T TIGR01839 263 -----REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAA 337 (560)
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcch
Confidence 1122344456788889998876 6789999999999999996 33 333 68988875532111
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 338 ~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly 417 (560)
T TIGR01839 338 LFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMF 417 (560)
T ss_pred hccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHH
Confidence
Q ss_pred ----------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcc
Q 025027 172 ----------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHG 224 (259)
Q Consensus 172 ----------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 224 (259)
.-++.+|++|+|++.|+.|.++|++.+..+.+.+. + ++++...++ ||-
T Consensus 418 ~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~g---s-~~~fvl~~g-GHI 481 (560)
T TIGR01839 418 KSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLG---G-KRRFVLSNS-GHI 481 (560)
T ss_pred hcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcC---C-CeEEEecCC-Ccc
Confidence 22578899999999999999999999999988772 3 578888874 894
No 104
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.39 E-value=3.1e-11 Score=95.04 Aligned_cols=193 Identities=18% Similarity=0.209 Sum_probs=121.4
Q ss_pred eeEEeCCCCCC-eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHH
Q 025027 46 KAYVTGPPHSK-KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAK 124 (259)
Q Consensus 46 ~~~~~~~~~~~-~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (259)
++.+..|.... -|||+++|++.....+|..+..+++++||+|++++.....+ ++ ..+.++++.
T Consensus 34 pLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~--p~--------------~~~Ei~~aa 97 (307)
T PF07224_consen 34 PLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP--PD--------------GQDEIKSAA 97 (307)
T ss_pred CeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC--CC--------------chHHHHHHH
Confidence 45666666443 25677777777666799999999999999999999953222 11 123347888
Q ss_pred HHHHHHHHc-----------CCCcEEEEeechhHHHHHHHhcC----cccceEEEecCCCCCh-------------hhhh
Q 025027 125 PVIAALKAK-----------GVSAVGAAGFCWGGKVAVKLASN----QDVQAAVLLHPSNVTE-------------DEIK 176 (259)
Q Consensus 125 ~~i~~l~~~-----------~~~~i~l~G~S~Gg~~a~~~a~~----~~i~~~i~~~~~~~~~-------------~~~~ 176 (259)
++++|+.+. +..+++++|||.||.+|+.+|.. -++.++|.+.|..... ....
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~SF 177 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYVPQSF 177 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecCCccc
Confidence 899998753 34699999999999999998832 2688899888754221 0123
Q ss_pred ccCCcEEEeecCCC----CCCC---h--HHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCCh------------h
Q 025027 177 AVKVPIAVLGAERD----NGLP---P--AQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDT------------F 235 (259)
Q Consensus 177 ~~~~Pvl~i~g~~D----~~~~---~--~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~------------~ 235 (259)
+.++|+++|-..-- .+.| + -.-+++++..+. ++...+-.+-||.-..+++...- .
T Consensus 178 ~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~----p~~hfV~~dYGHmDmLDD~~~g~~G~~~~clCkng~ 253 (307)
T PF07224_consen 178 DLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKP----PCAHFVAKDYGHMDMLDDDTPGIIGKLSYCLCKNGK 253 (307)
T ss_pred ccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcc----cceeeeecccccccccccCccccccceeeEeecCCC
Confidence 45689999875444 2222 2 234556666532 34444555567754433221000 0
Q ss_pred h--hhHHHHHHHHHHHHHHHhhhcC
Q 025027 236 A--VNSAAEAHEDMINWFEKHVKCD 258 (259)
Q Consensus 236 ~--~~~~~~~~~~~~~fl~~~~~~~ 258 (259)
. ...+.-+---++.||+.+++++
T Consensus 254 ~pr~pMRr~vgGivVAFL~a~l~~~ 278 (307)
T PF07224_consen 254 SPRDPMRRFVGGIVVAFLKAYLEGD 278 (307)
T ss_pred CcchHHHHhhhhhHHHHHHHHHcCC
Confidence 0 0123444456788888887653
No 105
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.38 E-value=2e-11 Score=98.20 Aligned_cols=197 Identities=17% Similarity=0.225 Sum_probs=123.7
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCC-CCC----CCC-CCcchhhhhhccCC-------------
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGD-AAN----PSN-PKYDKDTWRKNHTT------------- 116 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~-~~~----~~~-~~~~~~~~~~~~~~------------- 116 (259)
+-||+++.||.|.....|..++-.||++||+|.++.+|... .+. +.. .+.....|+.....
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 33567777777766689999999999999999999996221 110 010 11112223222111
Q ss_pred -CcccccHHHHHHHHHHc------------------------CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCC
Q 025027 117 -DKGYEDAKPVIAALKAK------------------------GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNV 170 (259)
Q Consensus 117 -~~~~~d~~~~i~~l~~~------------------------~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~ 170 (259)
.++.++...++.-|.+. +..+++++|||+||++++... .+.++++.|++.+|..
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWMF 276 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeeeec
Confidence 11111222222222221 335899999999999999866 5679999999999876
Q ss_pred Ch--hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCC-------------CCChh
Q 025027 171 TE--DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYF-------------VNDTF 235 (259)
Q Consensus 171 ~~--~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~-------------~~~~~ 235 (259)
+. ..+.+++.|+++|.- .|.. ..+...-+.+....+. .-.+.++.|+=|.-..+-. ..+.+
T Consensus 277 Pl~~~~~~~arqP~~finv-~~fQ-~~en~~vmKki~~~n~--g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~d 352 (399)
T KOG3847|consen 277 PLDQLQYSQARQPTLFINV-EDFQ-WNENLLVMKKIESQNE--GNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETD 352 (399)
T ss_pred ccchhhhhhccCCeEEEEc-cccc-chhHHHHHHhhhCCCc--cceEEEEccceecccccCccccHHHHHHHhccCCCCC
Confidence 54 467889999999994 3333 3567777777764333 3367788888885432211 11111
Q ss_pred hhhHHHHHHHHHHHHHHHhhh
Q 025027 236 AVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 236 ~~~~~~~~~~~~~~fl~~~~~ 256 (259)
..++.+...+..++||++++.
T Consensus 353 py~~~~~~~r~slaFLq~h~d 373 (399)
T KOG3847|consen 353 PYEAMQIAIRASLAFLQKHLD 373 (399)
T ss_pred hHHHHHHHHHHHHHHHHhhhh
Confidence 126778888999999999864
No 106
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.38 E-value=8.2e-12 Score=107.36 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=51.8
Q ss_pred ccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCC-CCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 177 AVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPG-VCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 177 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
++++|+|+++|++|.++|++..+.+.+.++. .+.+.+++++++ +||.... +..+++.+.+.+||++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~-~~~~a~l~~I~s~~GH~~~l----------e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQK-QGKYAEVYEIESINGHMAGV----------FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh-cCCCeEEEEECCCCCcchhh----------cCHHHHHHHHHHHHcc
Confidence 5788999999999999999999999998843 223578888885 8996533 2347888889999875
No 107
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.34 E-value=1.2e-10 Score=89.60 Aligned_cols=180 Identities=18% Similarity=0.191 Sum_probs=118.4
Q ss_pred CeeEEEEeccCCCCc---hhHHHHHHHHHhcCCEEEeeccCCC-----CCCCCC--------CCCcchhhhhhccC-CCc
Q 025027 56 KKAVLMISDIYGDEP---PIYRSVADKVAGAGFLVVAPDFFHG-----DAANPS--------NPKYDKDTWRKNHT-TDK 118 (259)
Q Consensus 56 ~~~vil~~~~~g~~~---~~~~~~a~~la~~G~~v~~~d~~~g-----~~~~~~--------~~~~~~~~~~~~~~-~~~ 118 (259)
++-|+++||...+.. .....+.+.+.+. +..+.+|.++. .+...+ ....++..|..... ...
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 355888988766542 1223456666666 77888887531 111111 11122455666544 222
Q ss_pred ----ccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhc----------CcccceEEEecCCCCChh------hhhcc
Q 025027 119 ----GYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLAS----------NQDVQAAVLLHPSNVTED------EIKAV 178 (259)
Q Consensus 119 ----~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~----------~~~i~~~i~~~~~~~~~~------~~~~~ 178 (259)
..+.+..+.+++..+++ ==+|+|||+|+.++..++. .|.++-+|.++|+..... ....+
T Consensus 84 ~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~~i 162 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKRPL 162 (230)
T ss_pred cccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhccCC
Confidence 22335555666655532 2399999999999999873 357899999999876521 23467
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
++|.|.+.|+.|.++|.+....+.+.+.. .++..-|| ||.+.. .....+.+.+||...+
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~-----a~vl~Hpg-gH~VP~------------~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKD-----ATVLEHPG-GHIVPN------------KAKYKEKIADFIQSFL 221 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCC-----CeEEecCC-CccCCC------------chHHHHHHHHHHHHHH
Confidence 99999999999999999999999999842 26667775 997733 2567777888887654
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.33 E-value=7.4e-11 Score=90.93 Aligned_cols=149 Identities=16% Similarity=0.091 Sum_probs=92.4
Q ss_pred EEEEeccCCCCc-hhHHHHHHHHHhcC--CEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC
Q 025027 59 VLMISDIYGDEP-PIYRSVADKVAGAG--FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV 135 (259)
Q Consensus 59 vil~~~~~g~~~-~~~~~~a~~la~~G--~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (259)
+|.+||..++.. .....+.+.+++.+ ..+..+|.. .. .+. -+..+.+.+.+...
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-~~-------------------p~~---a~~~l~~~i~~~~~ 58 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-PF-------------------PEE---AIAQLEQLIEELKP 58 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-cC-------------------HHH---HHHHHHHHHHhCCC
Confidence 566776655432 23455677788775 455566551 11 011 12223333333344
Q ss_pred CcEEEEeechhHHHHHHHhcCcccceEEEecCCCCCh-----------------------------hh----hhccCCcE
Q 025027 136 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVTE-----------------------------DE----IKAVKVPI 182 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~~-----------------------------~~----~~~~~~Pv 182 (259)
+.+.|+|.|+||..+..++..-.+++ |+++|...+. +. ......++
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~ 137 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERY 137 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccE
Confidence 56999999999999999997666776 7777765430 00 11224589
Q ss_pred EEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 025027 183 AVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 183 l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
++++++.|++++.+.+...++. ..++ +.+|++|.|.. .++..+.+++|+
T Consensus 138 lvll~~~DEvLd~~~a~~~~~~-------~~~~-i~~ggdH~f~~------------f~~~l~~i~~f~ 186 (187)
T PF05728_consen 138 LVLLQTGDEVLDYREAVAKYRG-------CAQI-IEEGGDHSFQD------------FEEYLPQIIAFL 186 (187)
T ss_pred EEEEecCCcccCHHHHHHHhcC-------ceEE-EEeCCCCCCcc------------HHHHHHHHHHhh
Confidence 9999999999997444333322 1233 55677999942 478888898886
No 109
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.32 E-value=1.4e-11 Score=98.08 Aligned_cols=128 Identities=23% Similarity=0.340 Sum_probs=90.4
Q ss_pred CEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cCc-ccce
Q 025027 85 FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQA 161 (259)
Q Consensus 85 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~ 161 (259)
|.|+++|.| |.+.+........ .+-...++.+.++.+.+. +.+++.++||||||.+++.++ .+| ++++
T Consensus 1 f~vi~~d~r-G~g~S~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~ 71 (230)
T PF00561_consen 1 FDVILFDLR-GFGYSSPHWDPDF--------PDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKK 71 (230)
T ss_dssp EEEEEEECT-TSTTSSSCCGSGS--------CTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEE
T ss_pred CEEEEEeCC-CCCCCCCCccCCc--------ccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcC
Confidence 689999995 5554432100000 112224555555555443 666799999999999999987 555 7999
Q ss_pred EEEecCC---------------CCC-------------------------------------------------------
Q 025027 162 AVLLHPS---------------NVT------------------------------------------------------- 171 (259)
Q Consensus 162 ~i~~~~~---------------~~~------------------------------------------------------- 171 (259)
+++..+. ...
T Consensus 72 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00561_consen 72 LVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAF 151 (230)
T ss_dssp EEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHH
T ss_pred cEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHH
Confidence 9998884 100
Q ss_pred ----------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 ----------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 ----------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
.....++++|+++++|++|.++|++....+.+.++ ..++.+++++||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 152 DNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-----NSQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-----TEEEEEETTCCSTHH
T ss_pred hhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-----CCEEEECCCCChHHH
Confidence 12345789999999999999999999999777763 468889999999653
No 110
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.32 E-value=1.7e-10 Score=92.24 Aligned_cols=139 Identities=14% Similarity=0.221 Sum_probs=100.4
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV 135 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (259)
...||-+||.+|++. .+..+...|.+.|++++.+++ +|.+..++.+.... +..+...-+.++++.|.- .
T Consensus 35 ~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~-PGf~~t~~~~~~~~-------~n~er~~~~~~ll~~l~i--~ 103 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINY-PGFGFTPGYPDQQY-------TNEERQNFVNALLDELGI--K 103 (297)
T ss_pred ceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCC-CCCCCCCCCccccc-------ChHHHHHHHHHHHHHcCC--C
Confidence 347888999999984 689999999999999999999 56665544333321 122222334444444432 3
Q ss_pred CcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC--------------------------------------------
Q 025027 136 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-------------------------------------------- 171 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~-------------------------------------------- 171 (259)
.+++.+|||.|+-.++.++...+..++++++|....
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~G 183 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHPLHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDG 183 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCccceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecCh
Confidence 689999999999999999955456788888875332
Q ss_pred ---------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHH
Q 025027 172 ---------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEIL 205 (259)
Q Consensus 172 ---------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l 205 (259)
.+.+.+-++|+|+++|.+|.++-.+...++...+
T Consensus 184 eeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 184 EEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 1234445689999999999999777777776665
No 111
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.29 E-value=1.5e-10 Score=88.46 Aligned_cols=179 Identities=15% Similarity=0.201 Sum_probs=113.7
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC-----------CcccccHHHH
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT-----------DKGYEDAKPV 126 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~d~~~~ 126 (259)
+.|++.|+.|++...+..+.+.+...+..-++|..+...-...+... ...|+..... ....+-+.++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~--~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAF--MNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCc--ccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 45555566776666677777777777777777755311100000000 0112222111 1111122223
Q ss_pred HHHHHHc--CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh-hhhhc-----cCCcEEEeecCCCCCCChH
Q 025027 127 IAALKAK--GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE-DEIKA-----VKVPIAVLGAERDNGLPPA 196 (259)
Q Consensus 127 i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~-~~~~~-----~~~Pvl~i~g~~D~~~~~~ 196 (259)
++.-.+. +..+|++.|+|+||.+++..+ ..+ .+.+++..+++.... ..++. -..|++..||+.|++||..
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~~vp~~ 161 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADPLVPFR 161 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCceeehH
Confidence 3332222 356999999999999999988 343 677777777766521 11111 1679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 197 QMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 197 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
..+...+.+ ...+.+++++.|+|.+|... .+-++++..|+++
T Consensus 162 ~g~~s~~~l-~~~~~~~~f~~y~g~~h~~~--------------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 162 FGEKSAQFL-KSLGVRVTFKPYPGLGHSTS--------------PQELDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHH-HHcCCceeeeecCCcccccc--------------HHHHHHHHHHHHH
Confidence 999999888 44566799999999999663 5667788888876
No 112
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.29 E-value=2.5e-11 Score=96.19 Aligned_cols=165 Identities=19% Similarity=0.238 Sum_probs=83.8
Q ss_pred CeeEEEEeccCCCCchhHHH----HHHHHHhcCCEEEeeccCCCC----CCCCC--------CCCcchhhhhhccCCCcc
Q 025027 56 KKAVLMISDIYGDEPPIYRS----VADKVAGAGFLVVAPDFFHGD----AANPS--------NPKYDKDTWRKNHTTDKG 119 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~----~a~~la~~G~~v~~~d~~~g~----~~~~~--------~~~~~~~~~~~~~~~~~~ 119 (259)
++-||++||... +...+.. +.+.|.+.++..+.+|-+.-. +.... ........|.........
T Consensus 4 k~riLcLHG~~~-na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 4 KPRILCLHGYGQ-NAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp --EEEEE--TT---HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CceEEEeCCCCc-CHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 345777776544 4344444 455565537999999875221 11110 011122334433322333
Q ss_pred cccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHhc----------CcccceEEEecCCCCChh------hhhccCC
Q 025027 120 YEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLAS----------NQDVQAAVLLHPSNVTED------EIKAVKV 180 (259)
Q Consensus 120 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~----------~~~i~~~i~~~~~~~~~~------~~~~~~~ 180 (259)
..++...++++.+. ...-.+|+|||+||.++..++. .+.+|.+|+++++..... ....+++
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i~i 162 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKISI 162 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT---
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccCCC
Confidence 45555555555442 2225799999999999998761 246899999988764321 2355799
Q ss_pred cEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 181 PIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 181 Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
|+|.++|++|.+++++..+.+.+.+... .++...+| ||.+.
T Consensus 163 PtlHv~G~~D~~~~~~~s~~L~~~~~~~----~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 163 PTLHVIGENDPVVPPERSEALAEMFDPD----ARVIEHDG-GHHVP 203 (212)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHHHHHH----EEEEEESS-SSS--
T ss_pred CeEEEEeCCCCCcchHHHHHHHHhccCC----cEEEEECC-CCcCc
Confidence 9999999999999999999999998521 57888885 99773
No 113
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.28 E-value=4.7e-10 Score=95.93 Aligned_cols=187 Identities=15% Similarity=0.102 Sum_probs=123.5
Q ss_pred eeeEEeCCCCC-----CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCC--CCCCcchhhhhhccCCC
Q 025027 45 LKAYVTGPPHS-----KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANP--SNPKYDKDTWRKNHTTD 117 (259)
Q Consensus 45 ~~~~~~~~~~~-----~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~--~~~~~~~~~~~~~~~~~ 117 (259)
.+++.+.+... +++||++...-|......+++.+.|.+ |+.|++.|+. .+... .... .+.+
T Consensus 86 ~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~--~p~~vp~~~~~---------f~ld 153 (406)
T TIGR01849 86 CRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWV--NARMVPLSAGK---------FDLE 153 (406)
T ss_pred eEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCC--CCCCCchhcCC---------CCHH
Confidence 55555555421 268888887776544455778999999 9999999983 32211 1111 1223
Q ss_pred cccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-----cC-c-ccceEEEecCCCCC-------------------
Q 025027 118 KGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-----SN-Q-DVQAAVLLHPSNVT------------------- 171 (259)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-----~~-~-~i~~~i~~~~~~~~------------------- 171 (259)
+.++-+..+++.+ +.+ +.++|+|+||..++.++ .. | +++.++++.+.++.
T Consensus 154 DYi~~l~~~i~~~---G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~ 229 (406)
T TIGR01849 154 DYIDYLIEFIRFL---GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWF 229 (406)
T ss_pred HHHHHHHHHHHHh---CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHH
Confidence 3333344444333 555 99999999999977654 11 2 58888775543211
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 230 ~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~ 309 (406)
T TIGR01849 230 QHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQT 309 (406)
T ss_pred HHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHH
Confidence
Q ss_pred --------------------hhhhhccC-CcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCC
Q 025027 172 --------------------EDEIKAVK-VPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYF 230 (259)
Q Consensus 172 --------------------~~~~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~ 230 (259)
.-++++|+ +|+|.+.|++|.++|++.+..+.+....-+..+++.+..+++||.=...+
T Consensus 310 v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G- 388 (406)
T TIGR01849 310 IDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSG- 388 (406)
T ss_pred HHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeC-
Confidence 22578888 99999999999999999999999986322233556677767899332222
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHh
Q 025027 231 VNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
. .+.++.|..+.+||.++
T Consensus 389 ~------r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 389 S------RFREEIYPLVREFIRRN 406 (406)
T ss_pred h------hhhhhhchHHHHHHHhC
Confidence 2 45699999999999864
No 114
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.28 E-value=7.3e-11 Score=89.55 Aligned_cols=160 Identities=20% Similarity=0.264 Sum_probs=107.6
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GV 135 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~ 135 (259)
..+|++.|-.|-+ ..-..+++.|+++|+.|+.+|.+ .-+-+..++++...|+..+++...++ +.
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl--------------~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~ 67 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSL--------------RYFWSERTPEQTAADLARIIRHYRARWGR 67 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechH--------------HHHhhhCCHHHHHHHHHHHHHHHHHHhCC
Confidence 4566666555543 45578999999999999999973 11123345677778999999998876 77
Q ss_pred CcEEEEeechhHHHHHHHh-cC-----cccceEEEecCCCCC---------------------hhhhhcc-CCcEEEeec
Q 025027 136 SAVGAAGFCWGGKVAVKLA-SN-----QDVQAAVLLHPSNVT---------------------EDEIKAV-KVPIAVLGA 187 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a-~~-----~~i~~~i~~~~~~~~---------------------~~~~~~~-~~Pvl~i~g 187 (259)
+++.|+|+|+|+-+.-.+. .- .+|+.++++.|.... ...+.++ ..|+++++|
T Consensus 68 ~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG 147 (192)
T PF06057_consen 68 KRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYG 147 (192)
T ss_pred ceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEc
Confidence 8999999999997776654 32 378999988865321 1233444 449999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 188 ERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 188 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
++|.-. .+.. ++. ...+....|| ||.|..+ .+...+.|++-+++
T Consensus 148 ~~E~d~---~cp~----l~~---~~~~~i~lpG-gHHfd~d-----------y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 148 EDEDDS---LCPS----LRQ---PGVEVIALPG-GHHFDGD-----------YDALAKRILDALKA 191 (192)
T ss_pred CCCCCC---cCcc----ccC---CCcEEEEcCC-CcCCCCC-----------HHHHHHHHHHHHhc
Confidence 776531 1111 211 2567889997 7767432 35566666665543
No 115
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.27 E-value=2.8e-10 Score=89.77 Aligned_cols=144 Identities=16% Similarity=0.148 Sum_probs=88.7
Q ss_pred eeEEEEeccCCCCchhHHHH--HHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhcc--CCCcccccHHHHHHHHH
Q 025027 57 KAVLMISDIYGDEPPIYRSV--ADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNH--TTDKGYEDAKPVIAALK 131 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~--a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~i~~l~ 131 (259)
|.||++||..+.. +.+... ...++++ ||.|+.|+... ......+ ..|.... .-......+.++++++.
T Consensus 17 PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~-~~~~~~c-----w~w~~~~~~~g~~d~~~i~~lv~~v~ 89 (220)
T PF10503_consen 17 PLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSR-RANPQGC-----WNWFSDDQQRGGGDVAFIAALVDYVA 89 (220)
T ss_pred CEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccc-cCCCCCc-----ccccccccccCccchhhHHHHHHhHh
Confidence 5566666655543 333221 2356655 99999998631 1100111 1122110 01122345777888887
Q ss_pred Hc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-------------------hh----hh----hccC
Q 025027 132 AK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-------------------ED----EI----KAVK 179 (259)
Q Consensus 132 ~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~-------------------~~----~~----~~~~ 179 (259)
.+ |+.||.+.|+|.||.++..++ .+| .+.++..+++.... +. .. ....
T Consensus 90 ~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~~ 169 (220)
T PF10503_consen 90 ARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYPG 169 (220)
T ss_pred hhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCCC
Confidence 65 788999999999999999988 555 67777766654321 00 00 1123
Q ss_pred CcEEEeecCCCCCCChHHHHHHHHHHhc
Q 025027 180 VPIAVLGAERDNGLPPAQMKRFDEILSA 207 (259)
Q Consensus 180 ~Pvl~i~g~~D~~~~~~~~~~~~~~l~~ 207 (259)
.|++++||+.|.+|.+....++.+.+..
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 5999999999999999888888887743
No 116
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.23 E-value=2.1e-11 Score=92.42 Aligned_cols=157 Identities=16% Similarity=0.135 Sum_probs=114.9
Q ss_pred EeCCCCCCeeEEEEeccCC--CCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHH
Q 025027 49 VTGPPHSKKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPV 126 (259)
Q Consensus 49 ~~~~~~~~~~vil~~~~~g--~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (259)
+..|+...+..|++|||+= .+.......+.-..+.||.|++++|- -.+ +.++.++.+.++...
T Consensus 60 Iwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~-l~~--------------q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 60 IWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN-LCP--------------QVHTLEQTMTQFTHG 124 (270)
T ss_pred EecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC-cCc--------------ccccHHHHHHHHHHH
Confidence 3466677789999998853 22233456677777889999999871 111 112345566778888
Q ss_pred HHHHHHc--CCCcEEEEeechhHHHHHHHh---cCcccceEEEecCCCCC-------------------------hhhhh
Q 025027 127 IAALKAK--GVSAVGAAGFCWGGKVAVKLA---SNQDVQAAVLLHPSNVT-------------------------EDEIK 176 (259)
Q Consensus 127 i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a---~~~~i~~~i~~~~~~~~-------------------------~~~~~ 176 (259)
++|+.+. +.+.+.+.|||.|+.++..+. ++|+|.++++++|.-.. ...++
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~ 204 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYT 204 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhc
Confidence 8888765 567899999999999999966 56899999998875321 23467
Q ss_pred ccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 177 AVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 177 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
.++.|+|++.+++|..--.++.+.+.+.++ +..+..|+|.+|.-
T Consensus 205 ~v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 205 DVTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYD 248 (270)
T ss_pred CceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhh
Confidence 788899999999998655678888877773 35788999988943
No 117
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.20 E-value=6e-10 Score=95.08 Aligned_cols=208 Identities=17% Similarity=0.208 Sum_probs=136.5
Q ss_pred eEeeeCCeeeEEeC-C--CCCCeeEEEEeccCCCCchhH-----HHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcch--
Q 025027 38 TVTELGGLKAYVTG-P--PHSKKAVLMISDIYGDEPPIY-----RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDK-- 107 (259)
Q Consensus 38 ~~~~~~~~~~~~~~-~--~~~~~~vil~~~~~g~~~~~~-----~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~-- 107 (259)
.+++.||..+-+.+ | .+++|+|++.||..++...+. ..++-.|+.+||.|..-+.| |...+.+.....-
T Consensus 52 ~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R-Gn~ySr~h~~l~~~~ 130 (403)
T KOG2624|consen 52 EVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR-GNTYSRKHKKLSPSS 130 (403)
T ss_pred EEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc-CcccchhhcccCCcC
Confidence 33456665444332 2 255678888888777543222 45778899999999999996 4433322211110
Q ss_pred hhhhhccCC-CcccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cCc----ccceEEEecCCCCC---------
Q 025027 108 DTWRKNHTT-DKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SNQ----DVQAAVLLHPSNVT--------- 171 (259)
Q Consensus 108 ~~~~~~~~~-~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~----~i~~~i~~~~~~~~--------- 171 (259)
..-+.+.+. +-...|+.+.|+++... +.+++..+|||+|+...+.+. .+| +|+..++++|....
T Consensus 131 ~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~ 210 (403)
T KOG2624|consen 131 DKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNK 210 (403)
T ss_pred CcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHH
Confidence 000112222 34668999999999876 578999999999999999866 333 58888887765310
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 211 ~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk 290 (403)
T KOG2624|consen 211 FLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVK 290 (403)
T ss_pred hhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHH
Confidence
Q ss_pred ----------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEe
Q 025027 172 ----------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKT 217 (259)
Q Consensus 172 ----------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 217 (259)
.-++..++.|+.+.+|++|.+..++++..+...+.. ... .....
T Consensus 291 ~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~-~~~-~~~~~ 368 (403)
T KOG2624|consen 291 NIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPN-SVI-KYIVP 368 (403)
T ss_pred HHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccc-ccc-ccccc
Confidence 113566789999999999999999999988887732 221 22223
Q ss_pred cCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 218 YPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 218 ~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
+++-.| +..-.+. ++.+++++.+++.+++..
T Consensus 369 ~~~ynH-lDFi~g~------da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 369 IPEYNH-LDFIWGL------DAKEEVYDPVIERLRLFE 399 (403)
T ss_pred CCCccc-eeeeecc------CcHHHHHHHHHHHHHhhh
Confidence 676777 2222222 467999999999998654
No 118
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.20 E-value=3.4e-09 Score=91.77 Aligned_cols=168 Identities=11% Similarity=0.112 Sum_probs=100.6
Q ss_pred eeeEEeCCCC----CCeeEEEEeccCCCCchhHHHHHHHHHhcC----CEEEeeccCCCCCCCCCCCCcchhhhhhccCC
Q 025027 45 LKAYVTGPPH----SKKAVLMISDIYGDEPPIYRSVADKVAGAG----FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 116 (259)
Q Consensus 45 ~~~~~~~~~~----~~~~vil~~~~~g~~~~~~~~~a~~la~~G----~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 116 (259)
.++++..|++ +.|.|+++||..-............+.++| .+++.+|...+..+..+.. .. ..+.
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~-~~-~~f~----- 266 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP-CN-ADFW----- 266 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCC-ch-HHHH-----
Confidence 6677776653 234555555533222222345566666666 5577887632221111100 00 0000
Q ss_pred CcccccHHHHHHHHHHc-----CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh-----------hhhhc-
Q 025027 117 DKGYEDAKPVIAALKAK-----GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE-----------DEIKA- 177 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~-----------~~~~~- 177 (259)
+ .-..+++.++.++ +.++.+|.|+||||..++.++ .+| .+.++++++|.+... +.+..
T Consensus 267 ~---~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~ 343 (411)
T PRK10439 267 L---AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAG 343 (411)
T ss_pred H---HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHhc
Confidence 0 1123344444443 567899999999999999988 555 799999999864210 11111
Q ss_pred ----cCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 178 ----VKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 178 ----~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
-...+++-+|+.|..+ .+..+.+.+.| .+.|.++++.+++| +|.+
T Consensus 344 ~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L-~~~G~~~~~~~~~G-GHd~ 392 (411)
T PRK10439 344 EVSARGLRIVLEAGRREPMI-MRANQALYAQL-HPAGHSVFWRQVDG-GHDA 392 (411)
T ss_pred ccCCCCceEEEeCCCCCchH-HHHHHHHHHHH-HHCCCcEEEEECCC-CcCH
Confidence 1346888899988654 46778899998 44677899999997 8976
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.19 E-value=3.5e-10 Score=93.66 Aligned_cols=67 Identities=19% Similarity=0.316 Sum_probs=55.4
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCC-CCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPK-FDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
+.|+++.+|..|+++|......+.+.+- +.| .++++..+++.+|.-.. .......++||++++.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c-~~G~a~V~~~~~~~~~H~~~~-------------~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC-AAGGADVEYVRYPGGGHLGAA-------------FASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH-HcCCCCEEEEecCCCChhhhh-------------hcCcHHHHHHHHHHHCC
Confidence 6799999999999999999999999984 456 79999999999996432 34456889999999876
Q ss_pred CC
Q 025027 258 DK 259 (259)
Q Consensus 258 ~~ 259 (259)
++
T Consensus 285 ~~ 286 (290)
T PF03583_consen 285 KP 286 (290)
T ss_pred CC
Confidence 53
No 120
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.13 E-value=2.7e-09 Score=87.33 Aligned_cols=165 Identities=18% Similarity=0.236 Sum_probs=112.8
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhc---CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGA---GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~---G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
+..++++.|-+|.- .+|..+.+.|.++ .|.|+++.+ -|+...+...... .-...++.++.++-..++++.+..
T Consensus 2 ~~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish-~Gh~~~~~~~~~~--~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISH-AGHSTSPSNSKFS--PNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecC-CCCcCCccccccc--CCCCccCHHHHHHHHHHHHHHHhh
Confidence 35678888888875 6899999988866 699999999 5665443321100 001112234444555555555544
Q ss_pred c---CCCcEEEEeechhHHHHHHHh-cCc----ccceEEEecCCCCC---------------------------------
Q 025027 133 K---GVSAVGAAGFCWGGKVAVKLA-SNQ----DVQAAVLLHPSNVT--------------------------------- 171 (259)
Q Consensus 133 ~---~~~~i~l~G~S~Gg~~a~~~a-~~~----~i~~~i~~~~~~~~--------------------------------- 171 (259)
. ...+++|+|||.|+++++.+. +.+ +|+.++++.|....
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~ 157 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSL 157 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 2 456899999999999999988 333 78999998876432
Q ss_pred ---------------------------------------------------h-hhh-hcc---CCcEEEeecCCCCCCCh
Q 025027 172 ---------------------------------------------------E-DEI-KAV---KVPIAVLGAERDNGLPP 195 (259)
Q Consensus 172 ---------------------------------------------------~-~~~-~~~---~~Pvl~i~g~~D~~~~~ 195 (259)
. +.+ ... ..++.+.+|.+|..+|.
T Consensus 158 lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~ 237 (266)
T PF10230_consen 158 LPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVPN 237 (266)
T ss_pred CCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCCH
Confidence 1 111 111 56899999999999999
Q ss_pred HHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 196 AQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
+..+++.+.++... .++++.. +|..|+|+
T Consensus 238 ~~~~~l~~~~~~~~-~~~~v~~-~~i~HaFc 266 (266)
T PF10230_consen 238 ETRDELIERYPGHE-PDVVVDE-EGIPHAFC 266 (266)
T ss_pred HHHHHHHHHcCCCC-CeEEEec-CCCCCCCC
Confidence 99999999985322 2455555 78899884
No 121
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.11 E-value=2.9e-10 Score=91.02 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=77.6
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCChhhhhcc-CCcEEEeecCCCCCCChHHHHHHHHHHhcCCC
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTEDEIKAV-KVPIAVLGAERDNGLPPAQMKRFDEILSAKPK 210 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~~~~~~~-~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~ 210 (259)
|.+||.++|.|+||..++.++ ..| .+.+.+.++|..........+ +.|++++|+++|+++|-+...-+.+.++.- +
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~-~ 345 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKAL-D 345 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhhhhhccCceEEEEecCCCccccCcceeehHHHHhh-c
Confidence 678999999999999999988 445 688899999887754444333 789999999999999988888877777432 2
Q ss_pred CCceEEecC---CCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 211 FDHLVKTYP---GVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 211 ~~~~~~~~~---g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
.++.+..|. -..|++..+... .+.....++++||-+
T Consensus 346 ~kv~Ytaf~~g~~~~eG~d~~g~w-------~atyn~~eaieWLl~ 384 (387)
T COG4099 346 RKVNYTAFLEGTTVLEGVDHSGVW-------WATYNDAEAIEWLLK 384 (387)
T ss_pred cccchhhhhhccccccccCCCCcc-------eeecCCHHHHHHHHh
Confidence 245555444 123444322211 123344567778754
No 122
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.02 E-value=1.5e-08 Score=81.08 Aligned_cols=169 Identities=21% Similarity=0.302 Sum_probs=105.8
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVS 136 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 136 (259)
++|+++|++.|.. ..|..+++.+...++.|+.+++. |.... ... .....+-+...++.+.+..+.
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~-~~~~~-~~~------------~~si~~la~~y~~~I~~~~~~ 65 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYP-GRGDD-EPP------------PDSIEELASRYAEAIRARQPE 65 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECST-TSCTT-SHE------------ESSHHHHHHHHHHHHHHHTSS
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecC-CCCCC-CCC------------CCCHHHHHHHHHHHhhhhCCC
Confidence 3689999998865 68999999999866888998884 44311 100 011123345566666655444
Q ss_pred -cEEEEeechhHHHHHHHhc-----CcccceEEEecCCCCC---------------------------------------
Q 025027 137 -AVGAAGFCWGGKVAVKLAS-----NQDVQAAVLLHPSNVT--------------------------------------- 171 (259)
Q Consensus 137 -~i~l~G~S~Gg~~a~~~a~-----~~~i~~~i~~~~~~~~--------------------------------------- 171 (259)
++.|+|||+||.+|+.+|+ ...+..++++.+....
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARL 145 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHH
T ss_pred CCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHH
Confidence 9999999999999999983 2368889888854321
Q ss_pred ----------hhhh--hcc---CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhh
Q 025027 172 ----------EDEI--KAV---KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFA 236 (259)
Q Consensus 172 ----------~~~~--~~~---~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~ 236 (259)
.... ... .+|..+.....|.....+......+ +.......++++.++| +|..... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-W~~~~~~~~~~~~v~G-~H~~~l~-~~----- 217 (229)
T PF00975_consen 146 LRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADR-WWDYTSGDVEVHDVPG-DHFSMLK-PH----- 217 (229)
T ss_dssp HHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCH-HHGCBSSSEEEEEESS-ETTGHHS-TT-----
T ss_pred HHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHH-HHHhcCCCcEEEEEcC-CCcEecc-hH-----
Confidence 0001 111 3467888888888765442122111 2222333678889986 9977654 22
Q ss_pred hhHHHHHHHHHHHHH
Q 025027 237 VNSAAEAHEDMINWF 251 (259)
Q Consensus 237 ~~~~~~~~~~~~~fl 251 (259)
..++.+.|.+||
T Consensus 218 ---~~~i~~~I~~~~ 229 (229)
T PF00975_consen 218 ---VAEIAEKIAEWL 229 (229)
T ss_dssp ---HHHHHHHHHHHH
T ss_pred ---HHHHHHHHhccC
Confidence 366666666665
No 123
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=5.8e-09 Score=83.88 Aligned_cols=205 Identities=19% Similarity=0.172 Sum_probs=114.9
Q ss_pred eeeEEeCCCC---CCeeEEEEeccCCCCchhHHHHH--HHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccC---
Q 025027 45 LKAYVTGPPH---SKKAVLMISDIYGDEPPIYRSVA--DKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT--- 115 (259)
Q Consensus 45 ~~~~~~~~~~---~~~~vil~~~~~g~~~~~~~~~a--~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~--- 115 (259)
....++.|.. ..|.||++||..+... .+.... +++|++ ||.|+.||-. ...+..... ..|....+
T Consensus 47 r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~-~~~wn~~~~----~~~~~p~~~~~ 120 (312)
T COG3509 47 RSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGY-DRAWNANGC----GNWFGPADRRR 120 (312)
T ss_pred cceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCcc-ccccCCCcc----cccCCcccccC
Confidence 4444455553 2356888888877653 444444 566655 9999999763 222211110 11211111
Q ss_pred CCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCC-CC-----hh-----------
Q 025027 116 TDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSN-VT-----ED----------- 173 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~-~~-----~~----------- 173 (259)
-...+..+.++++.+..+ ++.||.+.|.|-||.|+..++ ..+ .+.++..+.+.. .. ..
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~ 200 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPVSVMAFHGTA 200 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCCCchhHHHhcCCC
Confidence 122334577777777765 677999999999999999988 445 445444444433 11 00
Q ss_pred ----hhhccCCcEEEeecCCCCCCChHHHHHHHHHHhc----------------------CCCCCceEEecCCCCccccc
Q 025027 174 ----EIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSA----------------------KPKFDHLVKTYPGVCHGWTV 227 (259)
Q Consensus 174 ----~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~----------------------~~~~~~~~~~~~g~~H~~~~ 227 (259)
.+..-..| +.+|..|.+++..+..+....+.. ..+..++...+.|.||.+..
T Consensus 201 Dp~~p~~gG~~~--~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~ 278 (312)
T COG3509 201 DPLNPYHGGGVP--IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPG 278 (312)
T ss_pred CCCCCCCCCCcc--cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcC
Confidence 01111223 778888887765444444444421 11235778899999998853
Q ss_pred cCCC--CChhhhhHHHHHHHHHHHHHHHhhhc
Q 025027 228 RYFV--NDTFAVNSAAEAHEDMINWFEKHVKC 257 (259)
Q Consensus 228 ~~~~--~~~~~~~~~~~~~~~~~~fl~~~~~~ 257 (259)
.... .........-+..+.+.+|++++-+.
T Consensus 279 ~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~R~ 310 (312)
T COG3509 279 GTQYGPAALGMSTRGFDATERIWRFFRQHRRD 310 (312)
T ss_pred CCCCCcccccccccCcchHHHHHHHHHhcccc
Confidence 1110 00000122345677888899887543
No 124
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.00 E-value=5.7e-07 Score=75.19 Aligned_cols=185 Identities=13% Similarity=0.183 Sum_probs=109.3
Q ss_pred eeEEEEeccCCCC--chhHHHHHHHHHhcCCEEEeeccCC--CC--CCC-CC--------CCCcchh--h---------h
Q 025027 57 KAVLMISDIYGDE--PPIYRSVADKVAGAGFLVVAPDFFH--GD--AAN-PS--------NPKYDKD--T---------W 110 (259)
Q Consensus 57 ~~vil~~~~~g~~--~~~~~~~a~~la~~G~~v~~~d~~~--g~--~~~-~~--------~~~~~~~--~---------~ 110 (259)
..||++|+..... ......+.+.|.++||.++++..+. +. +.. .. .....-. . -
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAE 167 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhH
Confidence 3566666543321 2456778899999999999988753 11 000 00 0000000 0 0
Q ss_pred hhccCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcC---cccceEEEecCCCCCh-------hhhhccCC
Q 025027 111 RKNHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASN---QDVQAAVLLHPSNVTE-------DEIKAVKV 180 (259)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~i~~~i~~~~~~~~~-------~~~~~~~~ 180 (259)
......+.....+.++++++.+++..+|+|+||+.|+.++..+... +.++++|++++..... +.+...+.
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~~la~l~i 247 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAEQLAQLKI 247 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHHHhhccCC
Confidence 0000013344567788888888777779999999999999997733 3688999999876542 24567899
Q ss_pred cEEEeecCCCCCCChHHHHHHHHHH-hcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 181 PIAVLGAERDNGLPPAQMKRFDEIL-SAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 181 Pvl~i~g~~D~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
|||=|+... .-. ........+.+ +++.....+-..+.+..|.... ..+...+.|..||+++
T Consensus 248 PvLDi~~~~-~~~-~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-----------~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 248 PVLDIYSAD-NPA-SQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-----------WQEQLLRRIRGWLKRH 309 (310)
T ss_pred CEEEEecCC-ChH-HHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-----------HHHHHHHHHHHHHHhh
Confidence 999999866 321 12222222222 2222234455556655553311 1244899999999875
No 125
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.99 E-value=1.5e-09 Score=89.36 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=72.1
Q ss_pred CCeeEEEEeccCCCC-chhHHHHHHHHHh-cCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 55 SKKAVLMISDIYGDE-PPIYRSVADKVAG-AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 55 ~~~~vil~~~~~g~~-~~~~~~~a~~la~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
.+|++|++||+.+.. ..++..+++.+.+ .+|.|+++|++.+ .. .. +.. .....+...+++..+++.+.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~-~~-~~-----y~~--a~~~~~~v~~~la~~l~~L~~ 105 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRG-AN-PN-----YPQ--AVNNTRVVGAELAKFLDFLVD 105 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccc-cc-cC-----hHH--HHHhHHHHHHHHHHHHHHHHH
Confidence 357789999987765 3455667776655 5899999999532 11 11 000 001112233567788888865
Q ss_pred c---CCCcEEEEeechhHHHHHHHhcC--cccceEEEecCCC
Q 025027 133 K---GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN 169 (259)
Q Consensus 133 ~---~~~~i~l~G~S~Gg~~a~~~a~~--~~i~~~i~~~~~~ 169 (259)
. +.++|.|+|||+||.++..++.. .+++.++++.|..
T Consensus 106 ~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 106 NTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred hcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 4 45799999999999999998833 4899999998864
No 126
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.98 E-value=1.1e-08 Score=86.12 Aligned_cols=172 Identities=16% Similarity=0.150 Sum_probs=114.6
Q ss_pred ceEeee-CCeeeEEeCCCCC---CeeEEEEeccCCCC----chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchh
Q 025027 37 GTVTEL-GGLKAYVTGPPHS---KKAVLMISDIYGDE----PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKD 108 (259)
Q Consensus 37 g~~~~~-~~~~~~~~~~~~~---~~~vil~~~~~g~~----~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~ 108 (259)
|.++-- +-..++.++|..+ ++|+++++...... -..-..+.+.+.++|..|+.+++++ +....
T Consensus 84 g~vV~~ndv~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~n--Pd~~~------- 154 (445)
T COG3243 84 GKVVFRNDVLELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRN--PDASL------- 154 (445)
T ss_pred ceEEEeechhhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccC--chHhh-------
Confidence 344433 3344444445432 36788888765521 1112578899999999999999842 11100
Q ss_pred hhhhccCCCccc-ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHhcC---cccceEEEecCCCCC------------
Q 025027 109 TWRKNHTTDKGY-EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLASN---QDVQAAVLLHPSNVT------------ 171 (259)
Q Consensus 109 ~~~~~~~~~~~~-~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~---~~i~~~i~~~~~~~~------------ 171 (259)
...+.++.+ +.+..+++.+++. +.++|.++|+|.||.++..++.. .+|+.+..+..-.+.
T Consensus 155 ---~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~ 231 (445)
T COG3243 155 ---AAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANE 231 (445)
T ss_pred ---hhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCH
Confidence 011223334 6788888888876 45799999999999999986632 257777764422110
Q ss_pred --------------------------------------------------------------------------------
Q 025027 172 -------------------------------------------------------------------------------- 171 (259)
Q Consensus 172 -------------------------------------------------------------------------------- 171 (259)
T Consensus 232 ~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~ 311 (445)
T COG3243 232 ATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENR 311 (445)
T ss_pred HHHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhCh
Confidence
Q ss_pred -----------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 172 -----------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 172 -----------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
.-++.+|+||++++.+++|.+.|.+.+....+.+ .| ++++...+ .||--
T Consensus 312 l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~---~g-~~~f~l~~-sGHIa 371 (445)
T COG3243 312 LIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLL---GG-EVTFVLSR-SGHIA 371 (445)
T ss_pred hhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhc---CC-ceEEEEec-CceEE
Confidence 1257889999999999999999999998888877 33 66777776 69943
No 127
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.97 E-value=1.7e-08 Score=83.74 Aligned_cols=160 Identities=18% Similarity=0.204 Sum_probs=101.4
Q ss_pred eeEEEEeccCCCCchhHHH---HHHHHHhcCCEEEeeccC-CCCCCCCCCCCc---chhhhhhccCCCcccccHHHHHHH
Q 025027 57 KAVLMISDIYGDEPPIYRS---VADKVAGAGFLVVAPDFF-HGDAANPSNPKY---DKDTWRKNHTTDKGYEDAKPVIAA 129 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~---~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~i~~ 129 (259)
+++.+...|.|++. +++. +|..|.++|+..+++..+ ||.-....+.+. .+.+.+.. -...+.+...+++|
T Consensus 92 rp~~IhLagTGDh~-f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~--g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 92 RPVCIHLAGTGDHG-FWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVM--GRATILESRALLHW 168 (348)
T ss_pred CceEEEecCCCccc-hhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHH--HhHHHHHHHHHHHH
Confidence 34444445566653 2222 489999999999988865 554222221111 11211110 14566788899999
Q ss_pred HHHcCCCcEEEEeechhHHHHHHHh-cCcccceEE-EecCCCCC------------------------------------
Q 025027 130 LKAKGVSAVGAAGFCWGGKVAVKLA-SNQDVQAAV-LLHPSNVT------------------------------------ 171 (259)
Q Consensus 130 l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i-~~~~~~~~------------------------------------ 171 (259)
+.+++..++++.|.||||.+|..++ ..|+.-+++ ++++....
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~ 248 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQ 248 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccC
Confidence 9988888999999999999999987 445433333 32321100
Q ss_pred ----------------------------hhhhhcc-----CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEec
Q 025027 172 ----------------------------EDEIKAV-----KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTY 218 (259)
Q Consensus 172 ----------------------------~~~~~~~-----~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (259)
.-++.+. ...+.++.+++|..||.+.+..+.+.++ ..++..+
T Consensus 249 ~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-----GsEvR~l 323 (348)
T PF09752_consen 249 NKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP-----GSEVRYL 323 (348)
T ss_pred cccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC-----CCeEEEe
Confidence 0001111 2248899999999999999999888874 3577788
Q ss_pred CCCCccc
Q 025027 219 PGVCHGW 225 (259)
Q Consensus 219 ~g~~H~~ 225 (259)
+| ||--
T Consensus 324 ~g-GHVs 329 (348)
T PF09752_consen 324 PG-GHVS 329 (348)
T ss_pred cC-CcEE
Confidence 86 9944
No 128
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.91 E-value=4.2e-08 Score=85.57 Aligned_cols=92 Identities=17% Similarity=0.268 Sum_probs=73.9
Q ss_pred CCCcEEEEeechhHHHHHHHhcCc---ccceEEEecCC--------CCChhhhhccCCcEEEeecCCCCCCChHHHHHHH
Q 025027 134 GVSAVGAAGFCWGGKVAVKLASNQ---DVQAAVLLHPS--------NVTEDEIKAVKVPIAVLGAERDNGLPPAQMKRFD 202 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~i~~~~~--------~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~ 202 (259)
...+|+|+|+|+|+.++..++... .++++|++.=. ....+.+..++.|+|++.|.+|..+++...+.+.
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vr 327 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVR 327 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHHHHH
Confidence 456899999999988777776333 48888887521 1234577888999999999999999999999999
Q ss_pred HHHhcCCCCCceEEecCCCCccccccC
Q 025027 203 EILSAKPKFDHLVKTYPGVCHGWTVRY 229 (259)
Q Consensus 203 ~~l~~~~~~~~~~~~~~g~~H~~~~~~ 229 (259)
+.+.. ..+++++.+++|.+....
T Consensus 328 eKMqA----~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 328 EKMQA----EVELHVIGGADHSMAIPK 350 (784)
T ss_pred HHhhc----cceEEEecCCCccccCCc
Confidence 99843 568999999999997654
No 129
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.88 E-value=3.4e-08 Score=85.56 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=69.3
Q ss_pred CeeEEEEeccCCCC-c-hhHHHHHHHHHhc--CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 56 KKAVLMISDIYGDE-P-PIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 56 ~~~vil~~~~~g~~-~-~~~~~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
+|++|++||+.+.. . .+...+++.|.+. .|.|+++|++ |.+...-..... ......+++.+++++|.
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~-g~g~s~y~~a~~--------~t~~vg~~la~lI~~L~ 111 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWL-SRAQQHYPTSAA--------YTKLVGKDVAKFVNWMQ 111 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECC-CcCCCCCccccc--------cHHHHHHHHHHHHHHHH
Confidence 57788888876543 2 2333467666532 6999999995 433221100000 01223356778888875
Q ss_pred Hc---CCCcEEEEeechhHHHHHHHhcC--cccceEEEecCCC
Q 025027 132 AK---GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN 169 (259)
Q Consensus 132 ~~---~~~~i~l~G~S~Gg~~a~~~a~~--~~i~~~i~~~~~~ 169 (259)
.. +.+++.|+|||+||.++..++.. .+|..++++.|..
T Consensus 112 ~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 112 EEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 43 46799999999999999998843 4799999999864
No 130
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.88 E-value=3.2e-07 Score=73.36 Aligned_cols=96 Identities=24% Similarity=0.418 Sum_probs=57.6
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcC--CEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAG--FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G--~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
.++++++||+.+... .+......+.... |.++.+|.+ |++.+. ..... ......++..+++ ..
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~-g~g~s~-~~~~~---------~~~~~~~~~~~~~---~~ 85 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLR-GHGRSD-PAGYS---------LSAYADDLAALLD---AL 85 (282)
T ss_pred CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEeccc-CCCCCC-ccccc---------HHHHHHHHHHHHH---Hh
Confidence 447888888887653 3444323333321 999999996 776554 00000 0111233444444 33
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEec
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLH 166 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~ 166 (259)
+..++.++|||+||.+++.++ ..| ++++++...
T Consensus 86 ~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~ 120 (282)
T COG0596 86 GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIG 120 (282)
T ss_pred CCCceEEEEecccHHHHHHHHHhcchhhheeeEec
Confidence 555699999999999999987 334 466666654
No 131
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.86 E-value=6.2e-08 Score=78.29 Aligned_cols=183 Identities=15% Similarity=0.144 Sum_probs=107.9
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHH-hcCCE--EEeeccC-CCC----CCCCCCCCcc-hhhhhhc---cCCCcccccH
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVA-GAGFL--VVAPDFF-HGD----AANPSNPKYD-KDTWRKN---HTTDKGYEDA 123 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la-~~G~~--v~~~d~~-~g~----~~~~~~~~~~-~~~~~~~---~~~~~~~~d~ 123 (259)
..|.|++||+.|.. ..+..+.+++. ++|.. ++.++.. .|. |.-......+ +.-.+.. .++.....-+
T Consensus 11 ~tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 11 TTPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp -EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 46789999988875 46789999997 66532 3333321 332 1111111111 0000000 0122344557
Q ss_pred HHHHHHHHHc-CCCcEEEEeechhHHHHHHHhc-------CcccceEEEecCCCCCh-----------------------
Q 025027 124 KPVIAALKAK-GVSAVGAAGFCWGGKVAVKLAS-------NQDVQAAVLLHPSNVTE----------------------- 172 (259)
Q Consensus 124 ~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~-------~~~i~~~i~~~~~~~~~----------------------- 172 (259)
..++.+|+++ ..+++-++||||||..++.++. .|+++.+|.+.+.+...
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~~~ 169 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMTPM 169 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--HH
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccCHH
Confidence 7888888876 6789999999999999999761 25789999987643210
Q ss_pred --hhh----hc--cCCcEEEeecC------CCCCCChHHHHHHHHHHhcCCCCCceEEecCC--CCccccccCCCCChhh
Q 025027 173 --DEI----KA--VKVPIAVLGAE------RDNGLPPAQMKRFDEILSAKPKFDHLVKTYPG--VCHGWTVRYFVNDTFA 236 (259)
Q Consensus 173 --~~~----~~--~~~Pvl~i~g~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~~~~~~~~~~~ 236 (259)
+.+ .. -++.+|-|+|. .|..||...+..+...++ ......+-..+.| +.|.-..+.
T Consensus 170 y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~-~~~~~Y~e~~v~G~~a~HS~LheN------- 241 (255)
T PF06028_consen 170 YQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLK-NRAKSYQEKTVTGKDAQHSQLHEN------- 241 (255)
T ss_dssp HHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCT-TTSSEEEEEEEESGGGSCCGGGCC-------
T ss_pred HHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhh-cccCceEEEEEECCCCccccCCCC-------
Confidence 001 11 24569999998 799999999988888773 3333566667765 567554421
Q ss_pred hhHHHHHHHHHHHHH
Q 025027 237 VNSAAEAHEDMINWF 251 (259)
Q Consensus 237 ~~~~~~~~~~~~~fl 251 (259)
+++.+.+.+||
T Consensus 242 ----~~V~~~I~~FL 252 (255)
T PF06028_consen 242 ----PQVDKLIIQFL 252 (255)
T ss_dssp ----HHHHHHHHHHH
T ss_pred ----HHHHHHHHHHh
Confidence 67778888887
No 132
>PRK04940 hypothetical protein; Provisional
Probab=98.81 E-value=1.6e-07 Score=71.33 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=69.4
Q ss_pred CcEEEEeechhHHHHHHHhcCcccceEEEecCCCCChh---------------------hhhccCC--cEEEeecCCCCC
Q 025027 136 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVTED---------------------EIKAVKV--PIAVLGAERDNG 192 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~~~---------------------~~~~~~~--Pvl~i~g~~D~~ 192 (259)
+++.|+|.|+||+.|..++..-.+++| +++|...+.. .+. ++. ..+++..+.|++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aV-LiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~-~~~p~r~~vllq~gDEv 137 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQV-IFNPNLFPEENMEGKIDRPEEYADIATKCVTNFR-EKNRDRCLVILSRNDEV 137 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEE-EECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh-hcCcccEEEEEeCCCcc
Confidence 579999999999999999977677654 4556544321 111 222 469999999999
Q ss_pred CChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 193 LPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
++...+...+... ....+.+|++|.|. ..++....|++|+..
T Consensus 138 LDyr~a~~~y~~~-------y~~~v~~GGdH~f~------------~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 138 LDSQRTAEELHPY-------YEIVWDEEQTHKFK------------NISPHLQRIKAFKTL 179 (180)
T ss_pred cCHHHHHHHhccC-------ceEEEECCCCCCCC------------CHHHHHHHHHHHHhc
Confidence 9866555444321 15778899999993 348899999999853
No 133
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.78 E-value=5.9e-07 Score=67.05 Aligned_cols=90 Identities=14% Similarity=0.165 Sum_probs=67.9
Q ss_pred CCcEEEEeechhHHHHHHHhc--CcccceEEEecCCCCCh-----------hh--hhccCCcEEEeecCCCCCCChHHHH
Q 025027 135 VSAVGAAGFCWGGKVAVKLAS--NQDVQAAVLLHPSNVTE-----------DE--IKAVKVPIAVLGAERDNGLPPAQMK 199 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~--~~~i~~~i~~~~~~~~~-----------~~--~~~~~~Pvl~i~g~~D~~~~~~~~~ 199 (259)
...++|++||+|..+++.++. ...|+++++++|..... .. .....-|.+++...+|+.++++..+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~ 137 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDPYVSYEHAE 137 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCCCCCHHHHH
Confidence 345999999999999999883 35899999999875321 11 1222448999999999999999999
Q ss_pred HHHHHHhcCCCCCceEEecCCCCccccccCCC
Q 025027 200 RFDEILSAKPKFDHLVKTYPGVCHGWTVRYFV 231 (259)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~ 231 (259)
.+.+.+. ..+.....+|| |..+.+.
T Consensus 138 ~~a~~wg------s~lv~~g~~GH-iN~~sG~ 162 (181)
T COG3545 138 DLANAWG------SALVDVGEGGH-INAESGF 162 (181)
T ss_pred HHHHhcc------Hhheecccccc-cchhhcC
Confidence 9999983 35666677899 4443333
No 134
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.76 E-value=3e-08 Score=91.10 Aligned_cols=96 Identities=20% Similarity=0.166 Sum_probs=63.9
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCC---C-----Ccchhhhhh-------ccCCCcccc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSN---P-----KYDKDTWRK-------NHTTDKGYE 121 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~---~-----~~~~~~~~~-------~~~~~~~~~ 121 (259)
|+||++||..+.. ..|..+++.|+++||.|+++|++ |++.+... . ......++. +...++.+.
T Consensus 450 P~VVllHG~~g~~-~~~~~lA~~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 450 PVVIYQHGITGAK-ENALAFAGTLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred cEEEEeCCCCCCH-HHHHHHHHHHHhCCcEEEEeCCC-CCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 4666676666654 57899999999999999999995 44332111 0 000000111 123466667
Q ss_pred cHHHHHHHHH------H-------cCCCcEEEEeechhHHHHHHHh
Q 025027 122 DAKPVIAALK------A-------KGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 122 d~~~~i~~l~------~-------~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
|+..+...+. . .+..++.++||||||.++..++
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 7777777776 1 1346999999999999999977
No 135
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.76 E-value=9.6e-08 Score=73.12 Aligned_cols=93 Identities=18% Similarity=0.149 Sum_probs=62.3
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC-----------------------------hhhhhccCCcE
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-----------------------------EDEIKAVKVPI 182 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~-----------------------------~~~~~~~~~Pv 182 (259)
+..+++|.||||||.-++..+ .++ +.+.+.++.|.-.+ ...+.....-+
T Consensus 139 d~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~i 218 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDI 218 (283)
T ss_pred cchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccE
Confidence 567999999999999999976 444 78888888875433 12334445569
Q ss_pred EEeecCCCCCCChHH-HHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 183 AVLGAERDNGLPPAQ-MKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 183 l~i~g~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
|+-.|+.|.+.+.+- -+.+.++.+.....++.++.-+|-.|.+.
T Consensus 219 lIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 219 LIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYY 263 (283)
T ss_pred EEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCccee
Confidence 999999999876221 12333333222334667778888788653
No 136
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.73 E-value=3.3e-08 Score=65.25 Aligned_cols=51 Identities=27% Similarity=0.392 Sum_probs=40.6
Q ss_pred EeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCC
Q 025027 49 VTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANP 100 (259)
Q Consensus 49 ~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~ 100 (259)
...|+++.+++|++.||++.+...|..+++.|+++||.|+++|++ |+|.+.
T Consensus 8 ~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~r-GhG~S~ 58 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHR-GHGRSE 58 (79)
T ss_pred EecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCC-cCCCCC
Confidence 345665545677777778888889999999999999999999995 666554
No 137
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.72 E-value=3.4e-07 Score=76.23 Aligned_cols=110 Identities=19% Similarity=0.244 Sum_probs=62.6
Q ss_pred CeeEEEEeccCCCC--c--------hhHHHHH---HHHHhcCCEEEeeccCCCC-CCC-CCCCCcchhhhhhccCCCccc
Q 025027 56 KKAVLMISDIYGDE--P--------PIYRSVA---DKVAGAGFLVVAPDFFHGD-AAN-PSNPKYDKDTWRKNHTTDKGY 120 (259)
Q Consensus 56 ~~~vil~~~~~g~~--~--------~~~~~~a---~~la~~G~~v~~~d~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~ 120 (259)
..+|+++|+..|+. . .+|..+. +.+.-.-|-|++.|..+|. +.. +.+.... +..-...-+...+
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~-g~~yg~~FP~~ti 129 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG-GKPYGSDFPVITI 129 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC-CCccccCCCcccH
Confidence 45788888776632 1 1444433 2344445999999998554 222 2111111 1100011123445
Q ss_pred ccHHHHHHHHH-HcCCCcEE-EEeechhHHHHHHHh-cCc-ccceEEEec
Q 025027 121 EDAKPVIAALK-AKGVSAVG-AAGFCWGGKVAVKLA-SNQ-DVQAAVLLH 166 (259)
Q Consensus 121 ~d~~~~i~~l~-~~~~~~i~-l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~ 166 (259)
+|..++...|. ..+.+++. ++|-||||+.++..+ .+| +++.++.++
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia 179 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIA 179 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheec
Confidence 66666665553 34777776 999999999999976 555 566666544
No 138
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.70 E-value=7.2e-08 Score=78.34 Aligned_cols=99 Identities=21% Similarity=0.250 Sum_probs=63.0
Q ss_pred HHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh---------------h--------hhh
Q 025027 125 PVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE---------------D--------EIK 176 (259)
Q Consensus 125 ~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~---------------~--------~~~ 176 (259)
+++.++.++ ...+.+|+|+||||..++.++ .+| .+.++++++|..... . ..+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 180 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQK 180 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhcc
Confidence 455555554 223499999999999999988 566 799999999652110 0 112
Q ss_pred ccCCcEEEeecCCCCCCCh----------HHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 177 AVKVPIAVLGAERDNGLPP----------AQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 177 ~~~~Pvl~i~g~~D~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
.-..++++..|+.|..... +....+.+.+ ...+....+..++| +|.+
T Consensus 181 ~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~G-~H~~ 237 (251)
T PF00756_consen 181 KKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLL-KAKGIPHTYHVFPG-GHDW 237 (251)
T ss_dssp TSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHC-CCEECTTESEEEHS-ESSH
T ss_pred cCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHH-HHcCCCceEEEecC-ccch
Confidence 2355789999999984321 1222223333 33456777888884 8866
No 139
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=2.6e-06 Score=67.00 Aligned_cols=173 Identities=17% Similarity=0.155 Sum_probs=106.1
Q ss_pred EEeCCCCCCeeEEEEeccCCCCchhHHHHHHHHHhc-C--CEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHH
Q 025027 48 YVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGA-G--FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAK 124 (259)
Q Consensus 48 ~~~~~~~~~~~vil~~~~~g~~~~~~~~~a~~la~~-G--~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (259)
++..+...++.++++.|..|.. ..|..++++|-+. + +.+..+.+. |+..-+.+..++ .+. +..+.-...+.+.
T Consensus 21 ~v~~~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~-~H~~~P~sl~~~-~s~-~~~eifsL~~QV~ 96 (301)
T KOG3975|consen 21 WVTKSGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHA-GHALMPASLRED-HSH-TNEEIFSLQDQVD 96 (301)
T ss_pred eeccCCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEecc-ccccCCcccccc-ccc-ccccccchhhHHH
Confidence 3333334456677888888875 6899999998876 2 446666552 433222111111 000 0111222334455
Q ss_pred HHHHHHHHc--CCCcEEEEeechhHHHHHHHhcC----cccceEEEecCCCCC---------------------------
Q 025027 125 PVIAALKAK--GVSAVGAAGFCWGGKVAVKLASN----QDVQAAVLLHPSNVT--------------------------- 171 (259)
Q Consensus 125 ~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~----~~i~~~i~~~~~~~~--------------------------- 171 (259)
.-+++++.. ...||.++|||-|+++++.+... -++..++++.|....
T Consensus 97 HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi 176 (301)
T KOG3975|consen 97 HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYI 176 (301)
T ss_pred HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeee
Confidence 666666654 34699999999999999998731 145555554443110
Q ss_pred -----------------------------------------------h-----------hhhhccCCcEEEeecCCCCCC
Q 025027 172 -----------------------------------------------E-----------DEIKAVKVPIAVLGAERDNGL 193 (259)
Q Consensus 172 -----------------------------------------------~-----------~~~~~~~~Pvl~i~g~~D~~~ 193 (259)
. +-...-..-+.+.+|..|..+
T Consensus 177 ~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~ 256 (301)
T KOG3975|consen 177 YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWV 256 (301)
T ss_pred eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCc
Confidence 0 011222456889999999999
Q ss_pred ChHHHHHHHHHHhcCCCCCceEEecCCCCcccccc
Q 025027 194 PPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVR 228 (259)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 228 (259)
|.+-...+.+.+++ .+.++-+ .+..|+|...
T Consensus 257 p~~~~d~~kdd~~e---ed~~Lde-dki~HAFV~~ 287 (301)
T KOG3975|consen 257 PSHYYDYYKDDVPE---EDLKLDE-DKIPHAFVVK 287 (301)
T ss_pred chHHHHHHhhhcch---hceeecc-ccCCcceeec
Confidence 99999999998843 3666666 5689999654
No 140
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.67 E-value=1.9e-06 Score=69.69 Aligned_cols=169 Identities=11% Similarity=0.114 Sum_probs=114.4
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC---
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG--- 134 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~--- 134 (259)
|+|++.|+.|.........++.+.+.|+.++.+-..... ++... ......+..+++.+.+..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~-------------~~~~~--~~~~~~~~~l~~~l~~~~~~~ 65 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPAD-------------FFWPS--KRLAPAADKLLELLSDSQSAS 65 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHH-------------Heeec--cchHHHHHHHHHHhhhhccCC
Confidence 478888999988767777788888899999998763111 00000 111233444555555432
Q ss_pred CCcEEEEeechhHHHHHHHhc------------CcccceEEEecCCCCC-------------------------------
Q 025027 135 VSAVGAAGFCWGGKVAVKLAS------------NQDVQAAVLLHPSNVT------------------------------- 171 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~------------~~~i~~~i~~~~~~~~------------------------------- 171 (259)
..+|.+-.||.||...+.... .++++++|.-+.....
T Consensus 66 ~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 66 PPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFL 145 (240)
T ss_pred CCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 238999999998888877431 1358888875432100
Q ss_pred -----------------------hh--hhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 -----------------------ED--EIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 -----------------------~~--~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
.. ......+|-++++++.|.+++.+..++..+..+ +.|.+++...+++..|.-.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~-~~G~~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 146 LRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEAR-RKGWDVRAEKFEDSPHVAH 224 (240)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHH-HcCCeEEEecCCCCchhhh
Confidence 00 012235789999999999999999999999884 4677899999999999665
Q ss_pred ccCCCCChhhhhHHHHHHHHHHHHH
Q 025027 227 VRYFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
.+..+ ++.|+.+.+|+
T Consensus 225 ~r~~p---------~~Y~~~v~~fw 240 (240)
T PF05705_consen 225 LRKHP---------DRYWRAVDEFW 240 (240)
T ss_pred cccCH---------HHHHHHHHhhC
Confidence 44433 78888887763
No 141
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.62 E-value=4.1e-07 Score=79.71 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=134.3
Q ss_pred eCC--eeeEEeC-C--CCCCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccC
Q 025027 42 LGG--LKAYVTG-P--PHSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 115 (259)
Q Consensus 42 ~~~--~~~~~~~-~--~~~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 115 (259)
.|| ++.++.. . ..+.|.+|.-.||+.-. .+.|......+-++|-..+..+.|+|.-..++ +.+......
T Consensus 402 kDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~-----WH~Aa~k~n 476 (648)
T COG1505 402 KDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPE-----WHQAGMKEN 476 (648)
T ss_pred CCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHH-----HHHHHhhhc
Confidence 355 6666664 2 13456777777777733 35666666888999999999999865544332 111111223
Q ss_pred CCcccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCC--------------------
Q 025027 116 TDKGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------------------- 170 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~-------------------- 170 (259)
.+...+|..++.+.|..+ .++++++.|-|-||.++-... +.| .+.++++=.|-.+
T Consensus 477 rq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~P 556 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNP 556 (648)
T ss_pred chhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCC
Confidence 466778999999999877 367999999999999887755 666 4566665333221
Q ss_pred -Chh---------hhhcc-----CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChh
Q 025027 171 -TED---------EIKAV-----KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTF 235 (259)
Q Consensus 171 -~~~---------~~~~~-----~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 235 (259)
.++ .+.++ =.|+||-.+..|.-|.|..+..++..|. ..+.++-+.+--++||+-..+.
T Consensus 557 d~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~-e~~~pv~~~e~t~gGH~g~~~~------ 629 (648)
T COG1505 557 DDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQ-EVGAPVLLREETKGGHGGAAPT------ 629 (648)
T ss_pred CCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHH-hcCCceEEEeecCCcccCCCCh------
Confidence 111 12222 2389999999999999999999999994 4556777777777899754322
Q ss_pred hhhHHHHHHHHHHHHHHHhh
Q 025027 236 AVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 236 ~~~~~~~~~~~~~~fl~~~~ 255 (259)
.....-+..+..||.+.|
T Consensus 630 --~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 630 --AEIARELADLLAFLLRTL 647 (648)
T ss_pred --HHHHHHHHHHHHHHHHhh
Confidence 223556667888888876
No 142
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.56 E-value=1.2e-05 Score=68.26 Aligned_cols=199 Identities=15% Similarity=0.174 Sum_probs=125.8
Q ss_pred CCeeeEEeCC-CCCCeeEEEEeccCC-----CCchhHHHHHHHHHhc-CCEEEeeccCCCCCCC------CCCCC----c
Q 025027 43 GGLKAYVTGP-PHSKKAVLMISDIYG-----DEPPIYRSVADKVAGA-GFLVVAPDFFHGDAAN------PSNPK----Y 105 (259)
Q Consensus 43 ~~~~~~~~~~-~~~~~~vil~~~~~g-----~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~------~~~~~----~ 105 (259)
.-+.+++... ..+..++|++.+|.. ...+.....+..+|.. |-.|+.+..-.-++.. +...+ .
T Consensus 50 H~l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAy 129 (367)
T PF10142_consen 50 HWLTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAY 129 (367)
T ss_pred EEEEEEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHH
Confidence 3455555544 345578888888761 1123445677778876 6666665442222110 01111 1
Q ss_pred chhhhhhccCC--------C-cccccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh-cCcccceEEEec------
Q 025027 106 DKDTWRKNHTT--------D-KGYEDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLH------ 166 (259)
Q Consensus 106 ~~~~~~~~~~~--------~-~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~------ 166 (259)
.+..+++.... . .....+..+.+++++. ..++.++.|.|==|.+++..| .++||++++-+.
T Consensus 130 tW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~ 209 (367)
T PF10142_consen 130 TWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNM 209 (367)
T ss_pred HHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCc
Confidence 12223331111 1 1122233344444444 578999999999999999977 678999998632
Q ss_pred -----------C-CC-CC--------------------------h-hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHh
Q 025027 167 -----------P-SN-VT--------------------------E-DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILS 206 (259)
Q Consensus 167 -----------~-~~-~~--------------------------~-~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~ 206 (259)
| .. .. + .-..+.+.|-+++.|..|+++.++...-+++.|+
T Consensus 210 ~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~ 289 (367)
T PF10142_consen 210 KANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP 289 (367)
T ss_pred HHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC
Confidence 1 11 10 1 1135668999999999999999999999999994
Q ss_pred cCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhhcC
Q 025027 207 AKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKCD 258 (259)
Q Consensus 207 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~~ 258 (259)
| ++.+..+|+++|+... .++.+.+..|++....+.
T Consensus 290 ---G-~K~lr~vPN~~H~~~~-------------~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 290 ---G-EKYLRYVPNAGHSLIG-------------SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred ---C-CeeEEeCCCCCcccch-------------HHHHHHHHHHHHHHHcCC
Confidence 4 5689999999998743 678888999998866543
No 143
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.56 E-value=5.4e-06 Score=70.06 Aligned_cols=167 Identities=13% Similarity=0.127 Sum_probs=101.7
Q ss_pred CCeeeEEeC-CCC----CCeeEEEEeccCC---CCchhH---HHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhh
Q 025027 43 GGLKAYVTG-PPH----SKKAVLMISDIYG---DEPPIY---RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWR 111 (259)
Q Consensus 43 ~~~~~~~~~-~~~----~~~~vil~~~~~g---~~~~~~---~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~ 111 (259)
+.-..++.+ |.. .+|.+|.+|||.= .....+ ..+...|. ...+++.||. -.+....
T Consensus 104 d~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYs-Lt~~~~~---------- 170 (374)
T PF10340_consen 104 DSQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYS-LTSSDEH---------- 170 (374)
T ss_pred ccceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecc-ccccccC----------
Confidence 333456665 543 3466666665522 111111 22223333 5689999983 2210101
Q ss_pred hccCCCcccccHHHHHHHHH-HcCCCcEEEEeechhHHHHHHHhc---C----cccceEEEecCCCCC------------
Q 025027 112 KNHTTDKGYEDAKPVIAALK-AKGVSAVGAAGFCWGGKVAVKLAS---N----QDVQAAVLLHPSNVT------------ 171 (259)
Q Consensus 112 ~~~~~~~~~~d~~~~i~~l~-~~~~~~i~l~G~S~Gg~~a~~~a~---~----~~i~~~i~~~~~~~~------------ 171 (259)
...+...+.++.+.+++|- +.+...|.|+|-|.||.+++.+.+ + +..+.+|+++||...
T Consensus 171 -~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~ 249 (374)
T PF10340_consen 171 -GHKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYH 249 (374)
T ss_pred -CCcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccc
Confidence 1223445567888888887 567789999999999999999772 2 346889999988432
Q ss_pred -------------------------------------------hhhhhcc--CCcEEEeecCCCCCCChHHHHHHHHHHh
Q 025027 172 -------------------------------------------EDEIKAV--KVPIAVLGAERDNGLPPAQMKRFDEILS 206 (259)
Q Consensus 172 -------------------------------------------~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~l~ 206 (259)
.+.+.+| +.-+++++|+.+-+ +++..++.+.+.
T Consensus 250 ~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~ 327 (374)
T PF10340_consen 250 DNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLN 327 (374)
T ss_pred ccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHh
Confidence 1223333 34699999966655 567888888774
Q ss_pred cCC----CCCceEEecCCCCccc
Q 025027 207 AKP----KFDHLVKTYPGVCHGW 225 (259)
Q Consensus 207 ~~~----~~~~~~~~~~g~~H~~ 225 (259)
... +....+.+.+++.|.-
T Consensus 328 ~~~~~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 328 DVKPNKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred hcCccccCCcceEEEecCCcccc
Confidence 221 2245677788888854
No 144
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.56 E-value=3.4e-07 Score=81.84 Aligned_cols=118 Identities=17% Similarity=0.133 Sum_probs=74.4
Q ss_pred eeCCeeeEEeCCCC-----CCeeEEEEecc---CCCCchhHHHHHHHHHhc-C-CEEEeeccCCC-CCCCCCCCCcchhh
Q 025027 41 ELGGLKAYVTGPPH-----SKKAVLMISDI---YGDEPPIYRSVADKVAGA-G-FLVVAPDFFHG-DAANPSNPKYDKDT 109 (259)
Q Consensus 41 ~~~~~~~~~~~~~~-----~~~~vil~~~~---~g~~~~~~~~~a~~la~~-G-~~v~~~d~~~g-~~~~~~~~~~~~~~ 109 (259)
..|.+.+.+..|.. ..|.+|++||| .|.... .....|+++ + ++|++++||-| .+.......
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~---~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~----- 146 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSL---YPGDGLAREGDNVIVVSINYRLGVLGFLSTGDI----- 146 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCC---CChHHHHhcCCCEEEEEecccccccccccCCCC-----
Confidence 45677777777642 23667777775 233221 133455554 3 99999999722 222111100
Q ss_pred hhhccCCCcccccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHhcCc----ccceEEEecCCC
Q 025027 110 WRKNHTTDKGYEDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSN 169 (259)
Q Consensus 110 ~~~~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~i~~~~~~ 169 (259)
.........|...+++|++.+ ++++|.|+|+|.||.++..++..+ .++++|+.+|..
T Consensus 147 ---~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 147 ---ELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 011123357899999999875 678999999999999999977432 577788777643
No 145
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.55 E-value=1.9e-07 Score=73.78 Aligned_cols=88 Identities=20% Similarity=0.324 Sum_probs=55.5
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCE---EEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFL---VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
.|||++||..+.....|..++++|.++||. |++++| |...... . .... ....+...++.++|+.+.+.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~ty--g~~~~~~----~-~~~~--~~~~~~~~~l~~fI~~Vl~~ 72 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTY--GSGNGSP----S-VQNA--HMSCESAKQLRAFIDAVLAY 72 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE----S-CCHHT----H-HHHH--HB-HHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccC--CCCCCCC----c-cccc--ccchhhHHHHHHHHHHHHHh
Confidence 479999999985667889999999999999 799998 3221100 0 0011 11223346788889888766
Q ss_pred -CCCcEEEEeechhHHHHHHHh
Q 025027 134 -GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+. ||-|+||||||.++-.+.
T Consensus 73 TGa-kVDIVgHS~G~~iaR~yi 93 (219)
T PF01674_consen 73 TGA-KVDIVGHSMGGTIARYYI 93 (219)
T ss_dssp HT---EEEEEETCHHHHHHHHH
T ss_pred hCC-EEEEEEcCCcCHHHHHHH
Confidence 66 999999999999998876
No 146
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.54 E-value=3.3e-06 Score=74.69 Aligned_cols=118 Identities=19% Similarity=0.184 Sum_probs=76.8
Q ss_pred EeeeCCeeeEE--eCCC--CCCeeEEEEecc-CCCC---chhHHHHHH---HHHhcCCEEEeeccCCCCCCCCCCCCcch
Q 025027 39 VTELGGLKAYV--TGPP--HSKKAVLMISDI-YGDE---PPIYRSVAD---KVAGAGFLVVAPDFFHGDAANPSNPKYDK 107 (259)
Q Consensus 39 ~~~~~~~~~~~--~~~~--~~~~~vil~~~~-~g~~---~~~~~~~a~---~la~~G~~v~~~d~~~g~~~~~~~~~~~~ 107 (259)
+..-||++++. ..|. ++.|+++..+.+ +... ........+ .++.+||+|+..|.| |.+.+.......
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvR-G~~~SeG~~~~~- 101 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVR-GRGGSEGVFDPE- 101 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccc-ccccCCccccee-
Confidence 33557855554 4565 444555555522 1111 122344455 699999999999995 554433321111
Q ss_pred hhhhhccCCCcccccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHh--cCcccceEEEec
Q 025027 108 DTWRKNHTTDKGYEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLA--SNQDVQAAVLLH 166 (259)
Q Consensus 108 ~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a--~~~~i~~~i~~~ 166 (259)
..+..+|-.++|+|+.++ ...+++++|.|++|...+.+| .+|.+|+++...
T Consensus 102 --------~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~ 156 (563)
T COG2936 102 --------SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTE 156 (563)
T ss_pred --------ccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccc
Confidence 113568999999999887 356999999999999999988 446788887643
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.50 E-value=1.1e-05 Score=63.85 Aligned_cols=183 Identities=14% Similarity=0.116 Sum_probs=110.5
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcC-----CEEEeeccCCCC----CCCCCCCCcch---hhhhhccCCCcccccHH
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAG-----FLVVAPDFFHGD----AANPSNPKYDK---DTWRKNHTTDKGYEDAK 124 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G-----~~v~~~d~~~g~----~~~~~~~~~~~---~~~~~~~~~~~~~~d~~ 124 (259)
-|.|++||..|.. ..+..+++++.+.+ -.++.+|. .|. |--.+....++ +.-....+..+...-++
T Consensus 46 iPTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~-dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 46 IPTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDV-DGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcC-CCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 3688999877765 57788999998874 33555554 231 10011111110 00000011122234467
Q ss_pred HHHHHHHHc-CCCcEEEEeechhHHHHHHHh-------cCcccceEEEecCCCCC-------------------------
Q 025027 125 PVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-------SNQDVQAAVLLHPSNVT------------------------- 171 (259)
Q Consensus 125 ~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-------~~~~i~~~i~~~~~~~~------------------------- 171 (259)
.++.+|+++ +.+++-.+||||||.....++ ..|.++..+.+.+.+..
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~ 203 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYY 203 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHH
Confidence 788888877 778999999999999998876 23678888887765441
Q ss_pred ---hhhhhcc--CCcEEEeecCCC------CCCChHHHHHHHHHHhcCCCCCceEEecCC--CCccccccCCCCChhhhh
Q 025027 172 ---EDEIKAV--KVPIAVLGAERD------NGLPPAQMKRFDEILSAKPKFDHLVKTYPG--VCHGWTVRYFVNDTFAVN 238 (259)
Q Consensus 172 ---~~~~~~~--~~Pvl~i~g~~D------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~~~~~~~~~~~~~ 238 (259)
......+ ...+++|.|+-| ..||..........+ ..++..++-..|+| +.|.-..+.
T Consensus 204 ~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf-~~~~ksy~e~~~~Gk~a~Hs~lhen--------- 273 (288)
T COG4814 204 DYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLF-KKNGKSYIESLYKGKDARHSKLHEN--------- 273 (288)
T ss_pred HHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHh-ccCcceeEEEeeeCCcchhhccCCC---------
Confidence 0011112 446999999764 456777777777777 44444555556665 667554321
Q ss_pred HHHHHHHHHHHHHHH
Q 025027 239 SAAEAHEDMINWFEK 253 (259)
Q Consensus 239 ~~~~~~~~~~~fl~~ 253 (259)
+.+.+.+.+||-+
T Consensus 274 --~~v~~yv~~FLw~ 286 (288)
T COG4814 274 --PTVAKYVKNFLWE 286 (288)
T ss_pred --hhHHHHHHHHhhc
Confidence 5677778888754
No 148
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.46 E-value=3.4e-07 Score=82.49 Aligned_cols=120 Identities=15% Similarity=0.013 Sum_probs=69.1
Q ss_pred eeCCeeeEEeCCCC--C---CeeEEEEeccCC---CCchhHHHHHHHHHhcCCEEEeeccCCC---CCCCCCCCCcchhh
Q 025027 41 ELGGLKAYVTGPPH--S---KKAVLMISDIYG---DEPPIYRSVADKVAGAGFLVVAPDFFHG---DAANPSNPKYDKDT 109 (259)
Q Consensus 41 ~~~~~~~~~~~~~~--~---~~~vil~~~~~g---~~~~~~~~~a~~la~~G~~v~~~d~~~g---~~~~~~~~~~~~~~ 109 (259)
..|.|.+-+..|.. . .|++|++|||.- ........-...+++++++|++++||=| .-........
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~---- 180 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP---- 180 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH----
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC----
Confidence 44777777766652 1 255666666522 2211233445566788999999999722 2111111100
Q ss_pred hhhccCCCcccccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHhc----CcccceEEEecCCC
Q 025027 110 WRKNHTTDKGYEDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLAS----NQDVQAAVLLHPSN 169 (259)
Q Consensus 110 ~~~~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~----~~~i~~~i~~~~~~ 169 (259)
....-+.|...+++|++++ |+++|.|+|+|.||..+..++. .+-++.+|+.+|..
T Consensus 181 -----~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 181 -----SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp -----BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred -----chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 0122346899999999986 6789999999999999999762 34699999988843
No 149
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.43 E-value=4e-06 Score=72.67 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=39.8
Q ss_pred hhhccCCcEEEeecCCCCCCChHHHHHHHHHH-h-----cCCCCCceEEecCCCCc-cccccC
Q 025027 174 EIKAVKVPIAVLGAERDNGLPPAQMKRFDEIL-S-----AKPKFDHLVKTYPGVCH-GWTVRY 229 (259)
Q Consensus 174 ~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l-~-----~~~~~~~~~~~~~g~~H-~~~~~~ 229 (259)
++++|++|+.++++..|.++|++++..+...+ . ...|-.+-+.+.+..|| ++.+..
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~ 354 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSG 354 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEecc
Confidence 57889999999999999999998875543332 1 22344556778888899 444443
No 150
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.42 E-value=2.9e-06 Score=67.75 Aligned_cols=100 Identities=22% Similarity=0.165 Sum_probs=61.9
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhc--------CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHH
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGA--------GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVI 127 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~--------G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i 127 (259)
+.+||++||..|+. ..++.++..+.++ .+.+++.|+. ........ ....+..+-+...+
T Consensus 4 g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~-~~~s~~~g-----------~~l~~q~~~~~~~i 70 (225)
T PF07819_consen 4 GIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFN-EELSAFHG-----------RTLQRQAEFLAEAI 70 (225)
T ss_pred CCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccC-cccccccc-----------ccHHHHHHHHHHHH
Confidence 46899999987875 4567777666221 5888888873 22111000 00112223344444
Q ss_pred HHHHHc------CCCcEEEEeechhHHHHHHHhcC-----cccceEEEecCC
Q 025027 128 AALKAK------GVSAVGAAGFCWGGKVAVKLASN-----QDVQAAVLLHPS 168 (259)
Q Consensus 128 ~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~-----~~i~~~i~~~~~ 168 (259)
+.+.+. +.++|+|+||||||.++-.+... ..++.+|.+...
T Consensus 71 ~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 71 KYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 444322 46799999999999999887632 268999988743
No 151
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.38 E-value=2.6e-05 Score=63.48 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=67.2
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCCh--------hh------hhccC--CcEEEee-cCCCCCCC
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE--------DE------IKAVK--VPIAVLG-AERDNGLP 194 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~--------~~------~~~~~--~Pvl~i~-g~~D~~~~ 194 (259)
....-+|+|.|+||.+++..+ .+| .+-.+++.+|..... .. ...+. ..+.... ++.+.+++
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~ 254 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDERIVLTTGGEEGDFLR 254 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhhhhhhccCccceEEeecCCccccccc
Confidence 356789999999999999988 455 788888888865431 00 11111 1122223 33344443
Q ss_pred hHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 195 PAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
..+++.+.+ .+.+.+..+..|+| ||.+ ......+.++|...+
T Consensus 255 --pNr~L~~~L-~~~g~~~~yre~~G-gHdw---------------~~Wr~~l~~~L~~l~ 296 (299)
T COG2382 255 --PNRALAAQL-EKKGIPYYYREYPG-GHDW---------------AWWRPALAEGLQLLL 296 (299)
T ss_pred --hhHHHHHHH-HhcCCcceeeecCC-CCch---------------hHhHHHHHHHHHHhh
Confidence 577778888 55677899999998 9977 445556666665544
No 152
>COG0627 Predicted esterase [General function prediction only]
Probab=98.35 E-value=7.2e-06 Score=68.40 Aligned_cols=109 Identities=21% Similarity=0.242 Sum_probs=78.2
Q ss_pred cEEEEeechhHHHHHHHh-cC-cccceEEEecCCCCCh------------------------------------hhhh--
Q 025027 137 AVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVTE------------------------------------DEIK-- 176 (259)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a-~~-~~i~~~i~~~~~~~~~------------------------------------~~~~-- 176 (259)
+.+|+||||||.-++.+| .+ .+++.+..++|...+. ....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l 232 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKL 232 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchhHHHHh
Confidence 899999999999999988 55 4788888877653221 0111
Q ss_pred --c----------cCCcEEEeecCCCCCCC--hHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHH
Q 025027 177 --A----------VKVPIAVLGAERDNGLP--PAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAE 242 (259)
Q Consensus 177 --~----------~~~Pvl~i~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~ 242 (259)
. ...++++-+|..|.+.. ......+.+++ .+.|.+..+...++..|.+ .....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~-~~~g~~~~~~~~~~G~Hsw------------~~w~~ 299 (316)
T COG0627 233 VANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEAL-RAAGIPNGVRDQPGGDHSW------------YFWAS 299 (316)
T ss_pred hhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHH-HhcCCCceeeeCCCCCcCH------------HHHHH
Confidence 1 34567777888887763 34466777777 4455677888887889988 34578
Q ss_pred HHHHHHHHHHHhhhcC
Q 025027 243 AHEDMINWFEKHVKCD 258 (259)
Q Consensus 243 ~~~~~~~fl~~~~~~~ 258 (259)
..+..+.|+.+.++..
T Consensus 300 ~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 300 QLADHLPWLAGALGLA 315 (316)
T ss_pred HHHHHHHHHHHHhccC
Confidence 8889999998887653
No 153
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.35 E-value=2.9e-06 Score=73.30 Aligned_cols=122 Identities=14% Similarity=0.089 Sum_probs=77.7
Q ss_pred eeCCeeeEEeCCC-C--CCeeEEEEeccC---CCCchhHHHHHHHHHhcC-CEEEeeccCCC-CCCCCCCCCcchhhhh-
Q 025027 41 ELGGLKAYVTGPP-H--SKKAVLMISDIY---GDEPPIYRSVADKVAGAG-FLVVAPDFFHG-DAANPSNPKYDKDTWR- 111 (259)
Q Consensus 41 ~~~~~~~~~~~~~-~--~~~~vil~~~~~---g~~~~~~~~~a~~la~~G-~~v~~~d~~~g-~~~~~~~~~~~~~~~~- 111 (259)
..|.+-+.+..|+ . ..|++|++|||. |... ....-...|+++| ++|+++|||=| .|+-.-+ .+.
T Consensus 76 sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s-~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~------~~~~ 148 (491)
T COG2272 76 SEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGS-EPLYDGSALAARGDVVVVSVNYRLGALGFLDLS------SLDT 148 (491)
T ss_pred cccceeEEeeccCCCCCCCcEEEEEeccccccCCCc-ccccChHHHHhcCCEEEEEeCcccccceeeehh------hccc
Confidence 4466777777776 2 236677777663 2222 1123456789998 99999999833 2221110 000
Q ss_pred -hccCCCcccccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHhcCcc----cceEEEecCCC
Q 025027 112 -KNHTTDKGYEDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLASNQD----VQAAVLLHPSN 169 (259)
Q Consensus 112 -~~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~----i~~~i~~~~~~ 169 (259)
.......-+.|...+++|++++ |++.|.|+|.|.||+.++.+...|. ++.+|+.+|..
T Consensus 149 ~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 149 EDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 0000123457889999999887 7889999999999999999875553 55556666654
No 154
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=3.4e-06 Score=74.52 Aligned_cols=190 Identities=15% Similarity=0.130 Sum_probs=115.7
Q ss_pred CCCeeEEEEeccCCCCc-hhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDEP-PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~-~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
+++|.+|..+|++|..- +.|..--..|..+|++....|.|+|.......-.. +... .-.....|..+..++|..
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~--G~la---kKqN~f~Dfia~AeyLve 542 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD--GRLA---KKQNSFDDFIACAEYLVE 542 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc--cchh---hhcccHHHHHHHHHHHHH
Confidence 46688889999999542 33344344456689999999998554332111000 0000 113455788899999987
Q ss_pred c---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC---------------------------------hhh
Q 025027 133 K---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------------------------------EDE 174 (259)
Q Consensus 133 ~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~---------------------------------~~~ 174 (259)
+ .+.++.+.|.|.||.++-.+. .+| -++++|+=.|+... ...
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~p 622 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSP 622 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhheecccCc
Confidence 6 467999999999999999977 556 57777775554321 011
Q ss_pred hhccC-----CcEEEeecCCCCCCChHHHHHHHHHHhc----C--CCCCceEEecCCCCccccccCCCCChhhhhHHHHH
Q 025027 175 IKAVK-----VPIAVLGAERDNGLPPAQMKRFDEILSA----K--PKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEA 243 (259)
Q Consensus 175 ~~~~~-----~Pvl~i~g~~D~~~~~~~~~~~~~~l~~----~--~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~ 243 (259)
+.+++ .-+|+..+.+|..|.+-....+...++. . ...++.+.+..++||+.-... ....+-
T Consensus 623 v~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~--------~k~~~E 694 (712)
T KOG2237|consen 623 VDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPR--------FKQIEE 694 (712)
T ss_pred cCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCch--------HHHHHH
Confidence 22221 1478899999877655444444444432 1 113678889999999652211 112333
Q ss_pred HHHHHHHHHHhhh
Q 025027 244 HEDMINWFEKHVK 256 (259)
Q Consensus 244 ~~~~~~fl~~~~~ 256 (259)
.....+||.+.+.
T Consensus 695 ~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 695 AAFRYAFLAKMLN 707 (712)
T ss_pred HHHHHHHHHHHhc
Confidence 4456677776553
No 155
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.26 E-value=2.3e-05 Score=65.94 Aligned_cols=159 Identities=14% Similarity=0.162 Sum_probs=94.8
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK- 133 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~- 133 (259)
.+...|++.| .|.-.+.-..++++|.++|+.|+-+|.. ..-| +..+.++...|+..++++-..+
T Consensus 259 sd~~av~~SG-DGGWr~lDk~v~~~l~~~gvpVvGvdsL-RYfW-------------~~rtPe~~a~Dl~r~i~~y~~~w 323 (456)
T COG3946 259 SDTVAVFYSG-DGGWRDLDKEVAEALQKQGVPVVGVDSL-RYFW-------------SERTPEQIAADLSRLIRFYARRW 323 (456)
T ss_pred cceEEEEEec-CCchhhhhHHHHHHHHHCCCceeeeehh-hhhh-------------ccCCHHHHHHHHHHHHHHHHHhh
Confidence 3344444444 3433345578999999999999999974 1111 1234566678999999998876
Q ss_pred CCCcEEEEeechhHHHHHHHh-cC-----------------c------ccceEEEecCCC--CChhhhhcc-CCcEEEee
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SN-----------------Q------DVQAAVLLHPSN--VTEDEIKAV-KVPIAVLG 186 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~-----------------~------~i~~~i~~~~~~--~~~~~~~~~-~~Pvl~i~ 186 (259)
+..++.|+|+|+|+-+.-..- .. . .+.+.+...+.. ....++.++ ...+..||
T Consensus 324 ~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~~~~l~~~~v~CiY 403 (456)
T COG3946 324 GAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGAGDVVPDIAKLPLARVQCIY 403 (456)
T ss_pred CcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCCCCcchhhhhCCcceeEEEe
Confidence 778999999999997654422 10 1 233333333322 222344444 44789999
Q ss_pred cCCCC--CCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 187 AERDN--GLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 187 g~~D~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
|.+|+ .+| .+.. . ..+.+.+|| ||.|..+ .+...+.+++=++
T Consensus 404 G~~e~d~~Cp-----~l~~-----~--~~~~v~lpG-gHHFd~d-----------y~~la~~il~~~~ 447 (456)
T COG3946 404 GQEEKDTACP-----SLKA-----K--GVDTVKLPG-GHHFDGD-----------YEKLAKAILQGMR 447 (456)
T ss_pred cCccccccCC-----cchh-----h--cceeEecCC-CcccCcc-----------HHHHHHHHHHHHH
Confidence 97654 333 2111 1 346678897 6767432 3555555555543
No 156
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.23 E-value=2.1e-06 Score=72.37 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=72.8
Q ss_pred CCeeEEEEeccCCCC--chhHHHHHHHHHhc---CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHH
Q 025027 55 SKKAVLMISDIYGDE--PPIYRSVADKVAGA---GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAA 129 (259)
Q Consensus 55 ~~~~vil~~~~~g~~--~~~~~~~a~~la~~---G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~ 129 (259)
.+|.+|++||+.+.. ..+...+.+.+.++ ++.|+++|+..+.. . .+..... .....-+.+..+|..
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~--~-----~Y~~a~~--n~~~vg~~la~~l~~ 140 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS--N-----NYPQAVA--NTRLVGRQLAKFLSF 140 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS--S------HHHHHH--HHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc--c-----cccchhh--hHHHHHHHHHHHHHH
Confidence 457888898887765 35667777766554 79999999942211 0 0111110 112333456667777
Q ss_pred HHHc---CCCcEEEEeechhHHHHHHHhc--Cc--ccceEEEecCCCCChh------hhh-ccCCcEEEeecCCCC
Q 025027 130 LKAK---GVSAVGAAGFCWGGKVAVKLAS--NQ--DVQAAVLLHPSNVTED------EIK-AVKVPIAVLGAERDN 191 (259)
Q Consensus 130 l~~~---~~~~i~l~G~S~Gg~~a~~~a~--~~--~i~~~i~~~~~~~~~~------~~~-~~~~Pvl~i~g~~D~ 191 (259)
|... +.++|.|+|||+||.++-.++. .. +|..+..+.|...... .+. ....=|-+||...+.
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdvIHT~~~~ 216 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVDVIHTNAGT 216 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEEEE-SSES-
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhccCCceEEEEEcCCcc
Confidence 7632 5789999999999999999883 23 7999999998643211 121 123357788886654
No 157
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.19 E-value=7.5e-05 Score=58.00 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=68.1
Q ss_pred eeEEEEeccCCCC---chhHHHHHHHHHhcCCEEEeeccCCC-CCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 57 KAVLMISDIYGDE---PPIYRSVADKVAGAGFLVVAPDFFHG-DAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 57 ~~vil~~~~~g~~---~~~~~~~a~~la~~G~~v~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
...+++-||.|+. ......+++.+-+.+|..+.+.++.. .++... +..+..+|+..+++.+..
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~-------------slk~D~edl~~l~~Hi~~ 102 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF-------------SLKDDVEDLKCLLEHIQL 102 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc-------------cccccHHHHHHHHHHhhc
Confidence 3556666777753 45667899999999999999988521 122221 234556889999997764
Q ss_pred cC-CCcEEEEeechhHHHHHHHhcC----cccceEEEecCC
Q 025027 133 KG-VSAVGAAGFCWGGKVAVKLASN----QDVQAAVLLHPS 168 (259)
Q Consensus 133 ~~-~~~i~l~G~S~Gg~~a~~~a~~----~~i~~~i~~~~~ 168 (259)
.+ ...|+|+|||.|.--.+.+..+ ..+++.|+-+|.
T Consensus 103 ~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 103 CGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred cCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 43 3489999999999888776622 356666665554
No 158
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.16 E-value=7e-05 Score=60.14 Aligned_cols=131 Identities=13% Similarity=0.184 Sum_probs=78.0
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCC--EEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGF--LVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~--~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
+..+|++||....-.+.....++-....+| .++.+.|+. .+.... . +............+..+++.|...
T Consensus 18 ~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS-~g~~~~-Y------~~d~~~a~~s~~~l~~~L~~L~~~ 89 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPS-DGSLLG-Y------FYDRESARFSGPALARFLRDLARA 89 (233)
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCC-CCChhh-h------hhhhhhHHHHHHHHHHHHHHHHhc
Confidence 345666665444323333444443333344 688888852 211100 0 000111123345677777777766
Q ss_pred -CCCcEEEEeechhHHHHHHHhc-----C------cccceEEEecCCCCCh------hhhhccCCcEEEeecCCCCCCC
Q 025027 134 -GVSAVGAAGFCWGGKVAVKLAS-----N------QDVQAAVLLHPSNVTE------DEIKAVKVPIAVLGAERDNGLP 194 (259)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a~-----~------~~i~~~i~~~~~~~~~------~~~~~~~~Pvl~i~g~~D~~~~ 194 (259)
+..+|.|++||||+.+...+.. . .++..+++.+|-.... ..+.+...++.+.+..+|....
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL~ 168 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRALK 168 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHHH
Confidence 6789999999999999999651 1 2578889988876542 1234446789999999998653
No 159
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.12 E-value=2.3e-05 Score=68.50 Aligned_cols=88 Identities=10% Similarity=0.138 Sum_probs=62.0
Q ss_pred chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHH
Q 025027 70 PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGK 148 (259)
Q Consensus 70 ~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~ 148 (259)
...|..+.+.|.+.||.+ ..|++ |.+.+-... ...+...+++...++.+.+. +.+++.|+||||||.
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~-g~gYDwR~~----------~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGl 174 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLF-GFGYDFRQS----------NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGL 174 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcc-cCCCCcccc----------ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHH
Confidence 357889999999999876 67874 544321110 01123346788888887654 567999999999999
Q ss_pred HHHHHh-cCc-----ccceEEEecCCC
Q 025027 149 VAVKLA-SNQ-----DVQAAVLLHPSN 169 (259)
Q Consensus 149 ~a~~~a-~~~-----~i~~~i~~~~~~ 169 (259)
++..++ .++ .|+.+|++++..
T Consensus 175 va~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 175 LVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 999876 333 488888887654
No 160
>COG3150 Predicted esterase [General function prediction only]
Probab=98.11 E-value=0.0001 Score=54.75 Aligned_cols=108 Identities=16% Similarity=0.160 Sum_probs=67.5
Q ss_pred ccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC----------h-------------h----
Q 025027 121 EDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT----------E-------------D---- 173 (259)
Q Consensus 121 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~----------~-------------~---- 173 (259)
+.+..+|... ..+.++|+|-|+||+.+-.++..-.+++++. +|...+ + .
T Consensus 47 ~ele~~i~~~---~~~~p~ivGssLGGY~At~l~~~~Girav~~-NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~ 122 (191)
T COG3150 47 KELEKAVQEL---GDESPLIVGSSLGGYYATWLGFLCGIRAVVF-NPAVRPYELLTGYLGRPENPYTGQEYVLESRHIAT 122 (191)
T ss_pred HHHHHHHHHc---CCCCceEEeecchHHHHHHHHHHhCChhhhc-CCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHH
Confidence 3344444433 4456999999999999999998777776654 343222 0 0
Q ss_pred ----hhhcc-CCcEEEeecCC-CCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHH
Q 025027 174 ----EIKAV-KVPIAVLGAER-DNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDM 247 (259)
Q Consensus 174 ----~~~~~-~~Pvl~i~g~~-D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~ 247 (259)
.+... +...+++.... |++.....+.+.+... ...+.+|..|+|. ..+...+.+
T Consensus 123 l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~--------~~~V~dgg~H~F~------------~f~~~l~~i 182 (191)
T COG3150 123 LCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPC--------YEIVWDGGDHKFK------------GFSRHLQRI 182 (191)
T ss_pred HHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhh--------hheeecCCCcccc------------chHHhHHHH
Confidence 11222 22345555545 9988776666665554 3345667899993 236777888
Q ss_pred HHHHH
Q 025027 248 INWFE 252 (259)
Q Consensus 248 ~~fl~ 252 (259)
..|+.
T Consensus 183 ~aF~g 187 (191)
T COG3150 183 KAFKG 187 (191)
T ss_pred HHHhc
Confidence 88864
No 161
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.11 E-value=3.5e-05 Score=68.69 Aligned_cols=167 Identities=16% Similarity=0.103 Sum_probs=105.2
Q ss_pred CCCeeEEEEeccCCCCc-hhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDEP-PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~-~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
++.|+++.-.|.+|... +.+....-.|..+||+-.+.=-|+|.-..... ..-+.. ..-.....|..++.++|.+
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~W--Ye~GK~---l~K~NTf~DFIa~a~~Lv~ 520 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAW--YEDGKL---LNKKNTFTDFIAAARHLVK 520 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHH--HHhhhh---hhccccHHHHHHHHHHHHH
Confidence 45577888888888553 34555555788889876665555443211110 000111 1124556788889999887
Q ss_pred c---CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC------------------------h---------hh
Q 025027 133 K---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------E---------DE 174 (259)
Q Consensus 133 ~---~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~------------------------~---------~~ 174 (259)
+ ..++|+++|-|.||+++-.++ ..| .++++|+-.|+.+. + ..
T Consensus 521 ~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSP 600 (682)
T COG1770 521 EGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSP 600 (682)
T ss_pred cCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCc
Confidence 6 457999999999999999987 444 78999987776432 0 01
Q ss_pred hhcc----CCcEEEeecCCCCCCChHHHHHHHHHHhc--CCCCCceEEecCCCCccc
Q 025027 175 IKAV----KVPIAVLGAERDNGLPPAQMKRFDEILSA--KPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 175 ~~~~----~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~g~~H~~ 225 (259)
+.++ -.|+|+..|..|.-|.+=....+...|+. ..+.+.-+++--.+||+=
T Consensus 601 YdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG 657 (682)
T COG1770 601 YDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGG 657 (682)
T ss_pred hhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCC
Confidence 2222 34799999999999875333334344432 222356677756689953
No 162
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.07 E-value=6.7e-05 Score=62.19 Aligned_cols=101 Identities=13% Similarity=0.197 Sum_probs=68.1
Q ss_pred HHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc----CCCcEEEEeechhHHHHH
Q 025027 77 ADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK----GVSAVGAAGFCWGGKVAV 151 (259)
Q Consensus 77 a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~ 151 (259)
-..++++ |-+|++++|+ |.+.+.+.. +.++...+..+.+++|+.+ ..++|++.|||+||.++.
T Consensus 163 ~~~~ak~~~aNvl~fNYp-GVg~S~G~~-----------s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 163 IQRFAKELGANVLVFNYP-GVGSSTGPP-----------SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred HHHHHHHcCCcEEEECCC-ccccCCCCC-----------CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 3344544 8999999994 665554322 1245567888999999853 357999999999999988
Q ss_pred HHhcCc------ccceEEEecCCCC--------------------------ChhhhhccCCcEEEeecCC
Q 025027 152 KLASNQ------DVQAAVLLHPSNV--------------------------TEDEIKAVKVPIAVLGAER 189 (259)
Q Consensus 152 ~~a~~~------~i~~~i~~~~~~~--------------------------~~~~~~~~~~Pvl~i~g~~ 189 (259)
.+..+. .++.++.-.-.+. ..+...++.+|=+++++.+
T Consensus 231 ~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 231 EALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHhcccccCCCeeEEEEecCCcchHHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 866432 3554554322211 1345677889999999853
No 163
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.04 E-value=1.1e-05 Score=66.41 Aligned_cols=124 Identities=20% Similarity=0.176 Sum_probs=83.3
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc---
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK--- 133 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~--- 133 (259)
..||++-|.-|..+ ......=++.||.|+-++++ |...+...+ . .......+.+++++..+.
T Consensus 244 ~LvIC~EGNAGFYE---vG~m~tP~~lgYsvLGwNhP-GFagSTG~P-~----------p~n~~nA~DaVvQfAI~~Lgf 308 (517)
T KOG1553|consen 244 DLVICFEGNAGFYE---VGVMNTPAQLGYSVLGWNHP-GFAGSTGLP-Y----------PVNTLNAADAVVQFAIQVLGF 308 (517)
T ss_pred eEEEEecCCccceE---eeeecChHHhCceeeccCCC-CccccCCCC-C----------cccchHHHHHHHHHHHHHcCC
Confidence 45667666666542 23444556779999999994 543322211 0 122234556667766543
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCcccceEEEecCCCCC----------------------------hhhhhccCCcEEE
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT----------------------------EDEIKAVKVPIAV 184 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~~~~~~----------------------------~~~~~~~~~Pvl~ 184 (259)
..+.|+|.|||-||..+..+| ..|+++++|+-..+.+. .+-+.+-+.|+.+
T Consensus 309 ~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~l 388 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRL 388 (517)
T ss_pred CccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhH
Confidence 467899999999999999877 77999999997755321 1234556889999
Q ss_pred eecCCCCCCCh
Q 025027 185 LGAERDNGLPP 195 (259)
Q Consensus 185 i~g~~D~~~~~ 195 (259)
|.-.+|+++..
T Consensus 389 IRRt~dEIitt 399 (517)
T KOG1553|consen 389 IRRTQDEIITT 399 (517)
T ss_pred hhhhhHhhhhc
Confidence 99999988643
No 164
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.02 E-value=0.0004 Score=55.85 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=54.8
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCChh--------hhhcc-CCcEEEeec--CCCC---CCC---
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTED--------EIKAV-KVPIAVLGA--ERDN---GLP--- 194 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~~~--------~~~~~-~~Pvl~i~g--~~D~---~~~--- 194 (259)
+.++.+|+|||+||.+++... .+| .+...++.+|++.... ..... ..++.+..| +.|. ...
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~e~~~~~~~~~~~~ 214 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSGELDSSRSIRMAEN 214 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEecccccCcchhhhhhhH
Confidence 567899999999999999966 664 7888999998653211 01111 334444444 3333 222
Q ss_pred hHHHHHHHHHHhcCCCCCceEEecCCCCcc
Q 025027 195 PAQMKRFDEILSAKPKFDHLVKTYPGVCHG 224 (259)
Q Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 224 (259)
.+.+....+.+....+....+..+++.+|+
T Consensus 215 ~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~ 244 (264)
T COG2819 215 KQEAAELSSLLEKRTGARLVFQEEPLEHHG 244 (264)
T ss_pred HHHHHHHHHHHhhccCCceEeccccccccc
Confidence 233333334442325667778888877774
No 165
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.97 E-value=0.00083 Score=54.83 Aligned_cols=186 Identities=15% Similarity=0.205 Sum_probs=105.0
Q ss_pred eCCeeeEEeCCCC-CCeeEEEEeccCCCC-chhHHHH-----HHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhcc
Q 025027 42 LGGLKAYVTGPPH-SKKAVLMISDIYGDE-PPIYRSV-----ADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 114 (259)
Q Consensus 42 ~~~~~~~~~~~~~-~~~~vil~~~~~g~~-~~~~~~~-----a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 114 (259)
.|.+..++..... .+|++|=+|. .|.+ ..++..+ .+.+.+ .|.++=+|.+ |+.........+ ....
T Consensus 8 ~G~v~V~v~G~~~~~kp~ilT~HD-vGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aP-Gqe~ga~~~p~~----y~yP 80 (283)
T PF03096_consen 8 YGSVHVTVQGDPKGNKPAILTYHD-VGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAP-GQEEGAATLPEG----YQYP 80 (283)
T ss_dssp TEEEEEEEESS--TTS-EEEEE---TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-T-TTSTT-----TT--------
T ss_pred ceEEEEEEEecCCCCCceEEEecc-ccccchHHHHHHhcchhHHHHhh-ceEEEEEeCC-CCCCCccccccc----cccc
Confidence 3557777776554 3455555554 5544 2334443 344555 4999999994 543322211111 1112
Q ss_pred CCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC---------------------
Q 025027 115 TTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT--------------------- 171 (259)
Q Consensus 115 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~--------------------- 171 (259)
+.++..+++..+++++ +.+.++-+|--.||++-.++| .+| ++.++|++++....
T Consensus 81 smd~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp -HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred CHHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 3477778898999988 456899999999999999988 555 89999998875432
Q ss_pred ------------------------------------------------------hhhhhccCCcEEEeecCCCCCCChHH
Q 025027 172 ------------------------------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQ 197 (259)
Q Consensus 172 ------------------------------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~ 197 (259)
....+...+|+|++.|++-+. .+.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhh
Confidence 112344478999999998886 567
Q ss_pred HHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 198 MKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 198 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
+..+...+.. ...++...+++|=.... +...+..+.+.-||+
T Consensus 236 vv~~ns~Ldp---~~ttllkv~dcGglV~e----------EqP~klaea~~lFlQ 277 (283)
T PF03096_consen 236 VVEMNSKLDP---TKTTLLKVADCGGLVLE----------EQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHS-C---CCEEEEEETT-TT-HHH----------H-HHHHHHHHHHHHH
T ss_pred HHHHHhhcCc---ccceEEEecccCCcccc----------cCcHHHHHHHHHHHc
Confidence 7888888732 25677777776443321 334556666666654
No 166
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.92 E-value=0.00028 Score=70.42 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=61.7
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-C
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-G 134 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~ 134 (259)
.++++++|++.|.. ..|..+++.|.. ++.|+.++.+ |.+.... ... +.+...+++ ++.+... .
T Consensus 1068 ~~~l~~lh~~~g~~-~~~~~l~~~l~~-~~~v~~~~~~-g~~~~~~-~~~---------~l~~la~~~---~~~i~~~~~ 1131 (1296)
T PRK10252 1068 GPTLFCFHPASGFA-WQFSVLSRYLDP-QWSIYGIQSP-RPDGPMQ-TAT---------SLDEVCEAH---LATLLEQQP 1131 (1296)
T ss_pred CCCeEEecCCCCch-HHHHHHHHhcCC-CCcEEEEECC-CCCCCCC-CCC---------CHHHHHHHH---HHHHHhhCC
Confidence 46789999888875 578899998866 5999999984 4432111 111 112222333 3333332 2
Q ss_pred CCcEEEEeechhHHHHHHHhc----C-cccceEEEecC
Q 025027 135 VSAVGAAGFCWGGKVAVKLAS----N-QDVQAAVLLHP 167 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~----~-~~i~~~i~~~~ 167 (259)
..+..++|||+||.+++.++. . .++..++++.+
T Consensus 1132 ~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1132 HGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 358999999999999999884 2 36777766553
No 167
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.91 E-value=0.00019 Score=59.20 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=54.3
Q ss_pred hhccC-CcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 175 IKAVK-VPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 175 ~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
...+. .|+|+++|.+|..+|......+++..+.. +.+...+++++|........ ..++.+.++.+||++
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~-------~~~~~~~~~~~f~~~ 296 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER---PKKLLFVPGGGHIDLYDNPP-------AVEQALDKLAEFLER 296 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccC---CceEEEecCCccccccCccH-------HHHHHHHHHHHHHHH
Confidence 34455 69999999999999999999999887432 45677888889977542111 236899999999998
Q ss_pred hh
Q 025027 254 HV 255 (259)
Q Consensus 254 ~~ 255 (259)
.+
T Consensus 297 ~l 298 (299)
T COG1073 297 HL 298 (299)
T ss_pred hc
Confidence 75
No 168
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=0.0001 Score=59.66 Aligned_cols=98 Identities=18% Similarity=0.159 Sum_probs=70.2
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GV 135 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~ 135 (259)
++++++|+..|.- ..|..++..|... ..|+..+.+ |.+.... ......+.+...++.+++. +.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~-~~v~~l~a~-g~~~~~~-------------~~~~l~~~a~~yv~~Ir~~QP~ 64 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPL-LPVYGLQAP-GYGAGEQ-------------PFASLDDMAAAYVAAIRRVQPE 64 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccC-ceeeccccC-ccccccc-------------ccCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998886 5789999999998 899999884 3221100 0112224456667777654 55
Q ss_pred CcEEEEeechhHHHHHHHhc-----CcccceEEEecCCCC
Q 025027 136 SAVGAAGFCWGGKVAVKLAS-----NQDVQAAVLLHPSNV 170 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~-----~~~i~~~i~~~~~~~ 170 (259)
.+..|+|||+||.+++.+|. ...+..++++.+...
T Consensus 65 GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 65 GPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 69999999999999999983 236888888876655
No 169
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.72 E-value=0.0044 Score=52.99 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=29.5
Q ss_pred cEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEec
Q 025027 181 PIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTY 218 (259)
Q Consensus 181 Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (259)
-....|+..|+..|.+.-.++.+.+ .+-|-+++++.+
T Consensus 295 ~yvsYHs~~D~~~p~~~K~~l~~~l-~~lgfda~l~lI 331 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAEDKEELYEIL-KNLGFDATLHLI 331 (403)
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHH-HHcCCCeEEEEe
Confidence 3556789999999999999999999 445667777666
No 170
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.67 E-value=0.0056 Score=49.88 Aligned_cols=118 Identities=18% Similarity=0.207 Sum_probs=75.0
Q ss_pred eeCCeeeEEeCCCC-CCeeEEEEeccCCCC-chhHHHH-----HHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhc
Q 025027 41 ELGGLKAYVTGPPH-SKKAVLMISDIYGDE-PPIYRSV-----ADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN 113 (259)
Q Consensus 41 ~~~~~~~~~~~~~~-~~~~vil~~~~~g~~-~~~~~~~-----a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 113 (259)
..|.+..++.+... .+|+ |+-.|-.|.+ ..++..+ +..+.++ |.++-+|.+ |+-........++ .-
T Consensus 30 ~~G~v~V~V~Gd~~~~kpa-iiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~P-Gqe~gAp~~p~~y----~y 102 (326)
T KOG2931|consen 30 AHGVVHVTVYGDPKGNKPA-IITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAP-GQEDGAPSFPEGY----PY 102 (326)
T ss_pred ccccEEEEEecCCCCCCce-EEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCC-ccccCCccCCCCC----CC
Confidence 34568888876543 4455 5444555544 2334443 4567776 999999984 5432222111110 01
Q ss_pred cCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCC
Q 025027 114 HTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPS 168 (259)
Q Consensus 114 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~ 168 (259)
.+.++..+++..+++++ ..+.|+-+|--.|+++-.++| .+| +|.++|++++.
T Consensus 103 Psmd~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred CCHHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 12366667778888877 456899999999999999988 555 89999997754
No 171
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.67 E-value=0.0013 Score=52.41 Aligned_cols=161 Identities=18% Similarity=0.221 Sum_probs=90.7
Q ss_pred eEEeCCCCCCeeEEEEeccCC-C--CchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccH
Q 025027 47 AYVTGPPHSKKAVLMISDIYG-D--EPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDA 123 (259)
Q Consensus 47 ~~~~~~~~~~~~vil~~~~~g-~--~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 123 (259)
.++..|+.+ .+||-+-||-- . ..-.|+.+.+.|+++||.|++.-+..+. + .... ..+..+..
T Consensus 8 ~wvl~P~~P-~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf--D--H~~~----------A~~~~~~f 72 (250)
T PF07082_consen 8 SWVLIPPRP-KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF--D--HQAI----------AREVWERF 72 (250)
T ss_pred cEEEeCCCC-CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC--c--HHHH----------HHHHHHHH
Confidence 355666544 35665555422 2 2347889999999999999998764221 1 0000 01222345
Q ss_pred HHHHHHHHHcC-----CCcEEEEeechhHHHHHHHhcC--cccce--EEEecCCCC--------------------Ch-h
Q 025027 124 KPVIAALKAKG-----VSAVGAAGFCWGGKVAVKLASN--QDVQA--AVLLHPSNV--------------------TE-D 173 (259)
Q Consensus 124 ~~~i~~l~~~~-----~~~i~l~G~S~Gg~~a~~~a~~--~~i~~--~i~~~~~~~--------------------~~-~ 173 (259)
..+++.+.... .-++.=+|||+|+-+-+.+... ..-++ +++++-... .+ +
T Consensus 73 ~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~E 152 (250)
T PF07082_consen 73 ERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEE 152 (250)
T ss_pred HHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHHH
Confidence 55566665431 2367889999999999887732 12233 333331100 00 1
Q ss_pred h---h--hccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 174 E---I--KAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 174 ~---~--~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
. + .-....++++-=.+|.+ +....+.+.++.+...-.+....+| .|.-.
T Consensus 153 T~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTP 206 (250)
T PF07082_consen 153 TRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTP 206 (250)
T ss_pred HHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCc
Confidence 0 0 00133578887778876 4556666666544443567888986 89553
No 172
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.48 E-value=0.00064 Score=59.90 Aligned_cols=110 Identities=18% Similarity=0.108 Sum_probs=68.6
Q ss_pred eeEEEEeccCCCCchh--HHHHHHHHHhc-CCEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 57 KAVLMISDIYGDEPPI--YRSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~--~~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
.||+++.+|-+.-... ...+...||++ |-.++++.+| +|.+....... ..-++..+.+++++|+..++++++.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s---~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLS---TENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGG---GSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccc---hhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 4677777777754221 12355667766 8889999998 78876433211 1123445668999999999999985
Q ss_pred c----CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCC
Q 025027 133 K----GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSN 169 (259)
Q Consensus 133 ~----~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~ 169 (259)
+ +..|++++|-|+||+++..+- ..| -+.+.++.++..
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 4 345899999999999998876 666 577777776654
No 173
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.46 E-value=0.0019 Score=54.09 Aligned_cols=125 Identities=13% Similarity=0.153 Sum_probs=72.9
Q ss_pred eeEEEEeccCCCC-chhHHHHHHHHHhcC--CEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 57 KAVLMISDIYGDE-PPIYRSVADKVAGAG--FLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 57 ~~vil~~~~~g~~-~~~~~~~a~~la~~G--~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
+-|+++-||++.. .+.....++-....| ...+.+.|+ .|.-..... .+.+......++..+|.+|..
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~---------DreS~~~Sr~aLe~~lr~La~ 186 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY---------DRESTNYSRPALERLLRYLAT 186 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc---------chhhhhhhHHHHHHHHHHHHh
Confidence 4455555556543 334455666555555 455556664 222111110 011223444678889999987
Q ss_pred c-CCCcEEEEeechhHHHHHHHhc-----C-----cccceEEEecCCCCCh------hhhhccCCcEEEeecCCC
Q 025027 133 K-GVSAVGAAGFCWGGKVAVKLAS-----N-----QDVQAAVLLHPSNVTE------DEIKAVKVPIAVLGAERD 190 (259)
Q Consensus 133 ~-~~~~i~l~G~S~Gg~~a~~~a~-----~-----~~i~~~i~~~~~~~~~------~~~~~~~~Pvl~i~g~~D 190 (259)
. ..++|.|++||||..++....+ . .+|+-+|+..|-.... ..+.+...|.-+.....|
T Consensus 187 ~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dD 261 (377)
T COG4782 187 DKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDD 261 (377)
T ss_pred CCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccc
Confidence 6 4679999999999999988652 1 2688999988876531 223444555544444444
No 174
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.43 E-value=0.00054 Score=62.14 Aligned_cols=120 Identities=14% Similarity=-0.015 Sum_probs=71.8
Q ss_pred eeeCCeeeEEeCCCCC----CeeEEEEeccCCCCch----hHHHHHHHHHhcCCEEEeeccCCC-CCCCCCCCCcchhhh
Q 025027 40 TELGGLKAYVTGPPHS----KKAVLMISDIYGDEPP----IYRSVADKVAGAGFLVVAPDFFHG-DAANPSNPKYDKDTW 110 (259)
Q Consensus 40 ~~~~~~~~~~~~~~~~----~~~vil~~~~~g~~~~----~~~~~a~~la~~G~~v~~~d~~~g-~~~~~~~~~~~~~~~ 110 (259)
...|.+.+.+..|... .|+++.+|||.-.... ........+..+..+|+++++|=| -|.-........
T Consensus 92 ~sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~--- 168 (545)
T KOG1516|consen 92 GSEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAP--- 168 (545)
T ss_pred CcCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCC---
Confidence 3567788888777643 3667777766321111 122334445555799999999732 121111100000
Q ss_pred hhccCCCcccccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHhcCc----ccceEEEecC
Q 025027 111 RKNHTTDKGYEDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHP 167 (259)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~i~~~~ 167 (259)
-.....|...+++|++++ |+++|.|+|||.||..+..++..| .++.+|..+|
T Consensus 169 -----gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 169 -----GNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred -----CcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 112234888899999876 678999999999999998877443 3444444443
No 175
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.43 E-value=0.00055 Score=54.43 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=16.8
Q ss_pred CcEEEEeechhHHHHHHHh
Q 025027 136 SAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a 154 (259)
.+|.++|||+||.++-.+.
T Consensus 78 ~~IsfIgHSLGGli~r~al 96 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYAL 96 (217)
T ss_pred ccceEEEecccHHHHHHHH
Confidence 5899999999999997755
No 176
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.29 E-value=0.0054 Score=48.20 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=29.7
Q ss_pred CCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCC
Q 025027 134 GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNV 170 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~ 170 (259)
..++|.|+++|||-.++..+....+++..++++|...
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~~~~aiAINGT~~ 91 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIPFKRAIAINGTPY 91 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCCcceeEEEECCCC
Confidence 3568999999999999998876566777888777643
No 177
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.29 E-value=0.00072 Score=57.39 Aligned_cols=97 Identities=21% Similarity=0.243 Sum_probs=65.0
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCE---EEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFL---VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
+-+++++||. +.....+..+...+++.||. ++.+++..... .. ......+.+.+.++.+..
T Consensus 59 ~~pivlVhG~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~-------------~~~~~~~ql~~~V~~~l~ 122 (336)
T COG1075 59 KEPIVLVHGL-GGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDG--TY-------------SLAVRGEQLFAYVDEVLA 122 (336)
T ss_pred CceEEEEccC-cCCcchhhhhhhhhcchHHHhcccccccccccCC--Cc-------------cccccHHHHHHHHHHHHh
Confidence 3478999997 54446778888888888888 88887742211 00 011222444444554443
Q ss_pred c-CCCcEEEEeechhHHHHHHHhcC-c---ccceEEEecCC
Q 025027 133 K-GVSAVGAAGFCWGGKVAVKLASN-Q---DVQAAVLLHPS 168 (259)
Q Consensus 133 ~-~~~~i~l~G~S~Gg~~a~~~a~~-~---~i~~~i~~~~~ 168 (259)
. +.+++.|+|||+||..+..++.. + .++.++.+.+.
T Consensus 123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 3 66899999999999999987733 2 68888887754
No 178
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.22 E-value=0.00099 Score=57.75 Aligned_cols=82 Identities=16% Similarity=0.132 Sum_probs=59.2
Q ss_pred hHHHHHHHHHhcCCEE-----Ee-eccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCCcEEEEeech
Q 025027 72 IYRSVADKVAGAGFLV-----VA-PDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCW 145 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v-----~~-~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~ 145 (259)
.|..+.+.|.+.||.. .+ +|+|.... ..+....+++..|+.+.....+++.|+||||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-----------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSm 128 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-----------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSM 128 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-----------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 6889999999988763 22 56642211 0123346788888888766678999999999
Q ss_pred hHHHHHHHh-cC-------cccceEEEecCCCC
Q 025027 146 GGKVAVKLA-SN-------QDVQAAVLLHPSNV 170 (259)
Q Consensus 146 Gg~~a~~~a-~~-------~~i~~~i~~~~~~~ 170 (259)
||.++..+. .. ..|+.+|.+++...
T Consensus 129 Ggl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 129 GGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred CchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 999999966 21 26999999987654
No 179
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.21 E-value=0.0038 Score=48.56 Aligned_cols=83 Identities=23% Similarity=0.175 Sum_probs=49.6
Q ss_pred chhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHH
Q 025027 70 PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGK 148 (259)
Q Consensus 70 ~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~ 148 (259)
...|..++..+.. .+.|+.++.. |.+..... ..... ......++.+... +..++.++|||+||.
T Consensus 12 ~~~~~~~~~~l~~-~~~v~~~~~~-g~~~~~~~-~~~~~------------~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 12 PHEYARLAAALRG-RRDVSALPLP-GFGPGEPL-PASAD------------ALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred HHHHHHHHHhcCC-CccEEEecCC-CCCCCCCC-CCCHH------------HHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 3467888888876 4899999984 44321110 00100 1122233334332 356899999999999
Q ss_pred HHHHHhcC-----cccceEEEecC
Q 025027 149 VAVKLASN-----QDVQAAVLLHP 167 (259)
Q Consensus 149 ~a~~~a~~-----~~i~~~i~~~~ 167 (259)
++..++.. ..+..++...+
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEcc
Confidence 99887732 25677766543
No 180
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.19 E-value=0.0015 Score=45.31 Aligned_cols=60 Identities=20% Similarity=0.192 Sum_probs=48.5
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
..|+|++.++.|...|.+.+..+.+.+. ..+++..++.+|+... ... .=+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~-~~s---------~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYA-GGS---------PCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceec-CCC---------hHHHHHHHHHHHc
Confidence 5899999999999999999999999984 2478888999998864 222 4566777788875
No 181
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.03 E-value=0.0018 Score=59.16 Aligned_cols=97 Identities=24% Similarity=0.205 Sum_probs=59.1
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHh----------------cCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCccc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAG----------------AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 120 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~----------------~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (259)
-||+++.|.-|+.. ..+.+|..-.. ..|..+++|+ .+. +. .+......+.+
T Consensus 90 IPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDF-nEe----------~t-Am~G~~l~dQt 156 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDF-NEE----------FT-AMHGHILLDQT 156 (973)
T ss_pred ceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcc-cch----------hh-hhccHhHHHHH
Confidence 47999999888764 45666654432 1244555554 111 01 12222334455
Q ss_pred ccHHHHHHHHHHc--C--------CCcEEEEeechhHHHHHHHhcCc-----ccceEEEec
Q 025027 121 EDAKPVIAALKAK--G--------VSAVGAAGFCWGGKVAVKLASNQ-----DVQAAVLLH 166 (259)
Q Consensus 121 ~d~~~~i~~l~~~--~--------~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~i~~~ 166 (259)
+-+..+|.++.+. + +..|+|+||||||.+|..++..+ .|.-++..+
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 6667777776653 1 45699999999999999987443 455556554
No 182
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.00 E-value=0.0044 Score=46.28 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=48.2
Q ss_pred ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHhc---C---cccceEEEecCCCCChhh------hhccCCcEEEeec
Q 025027 121 EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLAS---N---QDVQAAVLLHPSNVTEDE------IKAVKVPIAVLGA 187 (259)
Q Consensus 121 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~---~---~~i~~~i~~~~~~~~~~~------~~~~~~Pvl~i~g 187 (259)
..+...++...+. +..+|.+.|||+||.++..++. . .....++++.+....... .......+.-++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~ 91 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVN 91 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEE
Confidence 3444444444432 5679999999999999999872 1 245667777765543222 2334567888999
Q ss_pred CCCCCC
Q 025027 188 ERDNGL 193 (259)
Q Consensus 188 ~~D~~~ 193 (259)
..|.+-
T Consensus 92 ~~D~v~ 97 (153)
T cd00741 92 DNDIVP 97 (153)
T ss_pred CCCccC
Confidence 899763
No 183
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.93 E-value=0.014 Score=47.75 Aligned_cols=102 Identities=15% Similarity=0.207 Sum_probs=49.4
Q ss_pred CeeEEEEeccCCCC--chhHHHHHHHHHhc--CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 56 KKAVLMISDIYGDE--PPIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 56 ~~~vil~~~~~g~~--~~~~~~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
..|||++||....- ...+..+.+.+.+. |.-|.+++. |.+... +....++. ..-+.+..+.+.++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i--g~~~~~----D~~~s~f~-----~v~~Qv~~vc~~l~ 73 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI--GNDPSE----DVENSFFG-----NVNDQVEQVCEQLA 73 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S--SSSHHH----HHHHHHHS-----HHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE--CCCcch----hhhhhHHH-----HHHHHHHHHHHHHh
Confidence 35788998875432 22345555544443 777777776 221100 00011111 11133445555555
Q ss_pred HcC--CCcEEEEeechhHHHHHHHh---cCcccceEEEecCC
Q 025027 132 AKG--VSAVGAAGFCWGGKVAVKLA---SNQDVQAAVLLHPS 168 (259)
Q Consensus 132 ~~~--~~~i~l~G~S~Gg~~a~~~a---~~~~i~~~i~~~~~ 168 (259)
+.+ ..-+.++|||+||.+.-.++ ..+.++.+|++++.
T Consensus 74 ~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 74 NDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp H-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 432 24699999999999999988 34689999998754
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.86 E-value=0.01 Score=47.72 Aligned_cols=97 Identities=16% Similarity=0.104 Sum_probs=66.2
Q ss_pred eeEEEEeccCCCCc-hhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-
Q 025027 57 KAVLMISDIYGDEP-PIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK- 133 (259)
Q Consensus 57 ~~vil~~~~~g~~~-~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~- 133 (259)
.|+|++||....-. ..+..+.+.+.+. |..|++.+...|..+ .| .....+.+.-+.+.+++-
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~----------s~-----l~pl~~Qv~~~ce~v~~m~ 88 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKD----------SS-----LMPLWEQVDVACEKVKQMP 88 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcch----------hh-----hccHHHHHHHHHHHHhcch
Confidence 57899998766432 2467788888877 999999998433111 01 112224566666666643
Q ss_pred -CCCcEEEEeechhHHHHHHHh---cCcccceEEEecCC
Q 025027 134 -GVSAVGAAGFCWGGKVAVKLA---SNQDVQAAVLLHPS 168 (259)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a---~~~~i~~~i~~~~~ 168 (259)
-.+-+.++|+|+||.++-.++ -.|.++..|.+++.
T Consensus 89 ~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 89 ELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred hccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 245799999999999999888 34788888887653
No 185
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.85 E-value=0.015 Score=51.70 Aligned_cols=67 Identities=16% Similarity=0.095 Sum_probs=52.1
Q ss_pred CcEEEeecCCCCCCChHHHHHHHHHHhcCCCC-------CceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 180 VPIAVLGAERDNGLPPAQMKRFDEILSAKPKF-------DHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 180 ~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
..+++.||..|.++|+.....+++.+....+. =.++...||++|......... -+.+..+.+|.+
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~--------~d~l~aL~~WVE 425 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDP--------FDALTALVDWVE 425 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCC--------CCHHHHHHHHHh
Confidence 36999999999999999999998888654332 357889999999876553332 478888999988
Q ss_pred Hh
Q 025027 253 KH 254 (259)
Q Consensus 253 ~~ 254 (259)
+-
T Consensus 426 ~G 427 (474)
T PF07519_consen 426 NG 427 (474)
T ss_pred CC
Confidence 63
No 186
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.78 E-value=0.023 Score=49.69 Aligned_cols=159 Identities=18% Similarity=0.103 Sum_probs=85.8
Q ss_pred eeeEEeCCCCCCeeEE-EEeccCCCCchhHHHHHHHHHhcCCE-EEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccc
Q 025027 45 LKAYVTGPPHSKKAVL-MISDIYGDEPPIYRSVADKVAGAGFL-VVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYE 121 (259)
Q Consensus 45 ~~~~~~~~~~~~~~vi-l~~~~~g~~~~~~~~~a~~la~~G~~-v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (259)
--.|+..|..-+||+. .+.|..... -+.. .-.+.+.|.- .+.-|.| .|.....++. +..+
T Consensus 277 Ei~yYFnPGD~KPPL~VYFSGyR~aE--GFEg-y~MMk~Lg~PfLL~~DpRleGGaFYlGs~--------------eyE~ 339 (511)
T TIGR03712 277 EFIYYFNPGDFKPPLNVYFSGYRPAE--GFEG-YFMMKRLGAPFLLIGDPRLEGGAFYLGSD--------------EYEQ 339 (511)
T ss_pred eeEEecCCcCCCCCeEEeeccCcccC--cchh-HHHHHhcCCCeEEeeccccccceeeeCcH--------------HHHH
Confidence 4456677877666654 554444421 1111 1223344443 3444665 3443333221 1112
Q ss_pred cHHHHHHH-HHHc--CCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCCC---------------------------
Q 025027 122 DAKPVIAA-LKAK--GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT--------------------------- 171 (259)
Q Consensus 122 d~~~~i~~-l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~~--------------------------- 171 (259)
.+.++|+. |... +.+.++|.|.|||..-|+.+++.-+..|+|.--|-...
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDvl~~~~g 419 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDILLLNTG 419 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCceEEEcCcccchhhhhccccccCCCCCchHHHhHHhhcC
Confidence 33333333 2223 45689999999999999999987666777763332110
Q ss_pred -----------hhhhhc------cCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCc
Q 025027 172 -----------EDEIKA------VKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCH 223 (259)
Q Consensus 172 -----------~~~~~~------~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 223 (259)
...+.. -+....+.+=.+|.. ...+..++.+.+. +.++++.-+-++| .|
T Consensus 420 ~~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDY-D~~A~~~L~~~l~-~~~~~v~~kG~~G-RH 485 (511)
T TIGR03712 420 GTSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDY-DPTAFQDLLPYLS-KQGAQVMSKGIPG-RH 485 (511)
T ss_pred CCCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccC-CHHHHHHHHHHHH-hcCCEEEecCCCC-CC
Confidence 001111 134566666666665 4578888888884 4455555556664 66
No 187
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.74 E-value=0.035 Score=49.48 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=48.6
Q ss_pred CcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 180 VPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 180 ~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
.|+.|+...-|++. +++..+++.+ ++-|..+.+.++++.-|+|.+---.+ ....+..+..++-|+..+.
T Consensus 788 Pp~~i~ac~mDP~L--DD~vmfA~kL-r~lG~~v~l~vle~lPHGFLnft~ls-----~E~~~~~~~CI~rl~~~L~ 856 (880)
T KOG4388|consen 788 PPVHIVACAMDPML--DDSVMFARKL-RNLGQPVTLRVLEDLPHGFLNFTALS-----RETRQAAELCIERLRLVLT 856 (880)
T ss_pred CCceEEEeccCcch--hHHHHHHHHH-HhcCCceeehhhhcCCccceeHHhhC-----HHHHHHHHHHHHHHHHHhC
Confidence 47889999999985 5788888888 45667899999999999996532221 2235555566666665543
No 188
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.65 E-value=0.006 Score=51.99 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=65.6
Q ss_pred eeEEEEeccCCCC------chhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHH
Q 025027 57 KAVLMISDIYGDE------PPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAA 129 (259)
Q Consensus 57 ~~vil~~~~~g~~------~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~ 129 (259)
.||++..|--|+- ...+..+|+++ +-.++.+.+| +|.+..-++....-.......+.+++..|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 5688888777642 22333344444 5568889998 787655443322222233344558888999999999
Q ss_pred HHHc---CCCcEEEEeechhHHHHHHHh-cCc
Q 025027 130 LKAK---GVSAVGAAGFCWGGKVAVKLA-SNQ 157 (259)
Q Consensus 130 l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~ 157 (259)
|+.. ...+++.+|-|+||+++..+= ..|
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcCh
Confidence 9876 456899999999999887754 445
No 189
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.094 Score=44.44 Aligned_cols=179 Identities=11% Similarity=0.071 Sum_probs=111.0
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCC-CCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFH-GDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
....+|+++-+|.|............+.+.||.++..-.+. -........ ......+...+..+.+
T Consensus 36 ~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~-------------~~sl~~~~~~l~~L~~ 102 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRR-------------ILSLSLASTRLSELLS 102 (350)
T ss_pred CccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccc-------------cchhhHHHHHHHHHhh
Confidence 33457899999999877667778888888899998887641 111111111 1111222222333322
Q ss_pred ---cCCCcEEEEeechhHHHHHHHh-----cC-c----ccceEEEecC-CCCC---------------------------
Q 025027 133 ---KGVSAVGAAGFCWGGKVAVKLA-----SN-Q----DVQAAVLLHP-SNVT--------------------------- 171 (259)
Q Consensus 133 ---~~~~~i~l~G~S~Gg~~a~~~a-----~~-~----~i~~~i~~~~-~~~~--------------------------- 171 (259)
-++.+|..--||+||...+... .+ | ...+++..+- ....
T Consensus 103 ~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 182 (350)
T KOG2521|consen 103 DYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYH 182 (350)
T ss_pred hccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeE
Confidence 2567888889999998777632 12 2 2333333221 1000
Q ss_pred -----------------------------------hhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEE
Q 025027 172 -----------------------------------EDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVK 216 (259)
Q Consensus 172 -----------------------------------~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 216 (259)
.........+.+.+++..|.++|.+..+++.+.. +..|..+.-.
T Consensus 183 i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~-~~~g~~v~s~ 261 (350)
T KOG2521|consen 183 ITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALR-REKGVNVKSV 261 (350)
T ss_pred EEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHH-HhcCceEEEe
Confidence 0011222457889999999999999999997766 4556677777
Q ss_pred ecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhh
Q 025027 217 TYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 255 (259)
Q Consensus 217 ~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 255 (259)
-+.++.|.-..+..+ ...++...+|++...
T Consensus 262 ~~~ds~H~~h~r~~p---------~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 262 KFKDSEHVAHFRSFP---------KTYLKKCSEFLRSVI 291 (350)
T ss_pred eccCccceeeeccCc---------HHHHHHHHHHHHhcc
Confidence 777788865444444 889999999998754
No 190
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.58 E-value=0.011 Score=52.59 Aligned_cols=109 Identities=14% Similarity=0.084 Sum_probs=66.5
Q ss_pred CCeeEEEEeccCCCCchhHHHHH------------------HHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVA------------------DKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 116 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a------------------~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 116 (259)
.+|.+|.+.||+|... .+..+. ..+.++ ..++.+|.+.|.|.+....... ..+.
T Consensus 76 ~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~------~~~~ 147 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADY------DHNE 147 (462)
T ss_pred CCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCC------CCCh
Confidence 4578889999999752 111111 012232 6677888765666554322110 1122
Q ss_pred CcccccHHHHHHHHHHc----CCCcEEEEeechhHHHHHHHhcC----------c--ccceEEEecCCCCC
Q 025027 117 DKGYEDAKPVIAALKAK----GVSAVGAAGFCWGGKVAVKLASN----------Q--DVQAAVLLHPSNVT 171 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----------~--~i~~~i~~~~~~~~ 171 (259)
++..+|+..+++...++ ...++.|.|+|+||..+-.++.. . +++++++-+|+..+
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 45567777777765443 34689999999999999887721 1 57888887776643
No 191
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.38 E-value=0.021 Score=43.61 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=52.1
Q ss_pred cccccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHhcC--cccceEEEecCCCCChhhhhcc---CCcEEEeecCCC
Q 025027 118 KGYEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSNVTEDEIKAV---KVPIAVLGAERD 190 (259)
Q Consensus 118 ~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~--~~i~~~i~~~~~~~~~~~~~~~---~~Pvl~i~g~~D 190 (259)
....++..+++-|+.. +..++.++|||+|..++-..++. ..+..++++............. ...++...+..|
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~a~~l~~~~~~v~a~~a~~D 168 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDSASDLGVPPGHVYAMTAPGD 168 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCCHHHcCCCCCcEEEeeCCCC
Confidence 3345677777777654 45699999999999999998865 4788877765433332222222 355899999888
Q ss_pred CC
Q 025027 191 NG 192 (259)
Q Consensus 191 ~~ 192 (259)
.+
T Consensus 169 ~I 170 (177)
T PF06259_consen 169 PI 170 (177)
T ss_pred Cc
Confidence 76
No 192
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.33 E-value=0.012 Score=46.94 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=40.7
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHHhcC------cccceEEEecCCCCC-----hhhhhccCCcEEEeecCCC
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKLASN------QDVQAAVLLHPSNVT-----EDEIKAVKVPIAVLGAERD 190 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~------~~i~~~i~~~~~~~~-----~~~~~~~~~Pvl~i~g~~D 190 (259)
+.++.+.+....+|.+.|||.||.+|..++.. .+|..+..+.+.... ...+..+..++.-+..+.|
T Consensus 73 ~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~~~~~~~~~~~~~kI~~~vp~~s 149 (224)
T PF11187_consen 73 AYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEEFLESPGYQRIKDKIHNYVPQSS 149 (224)
T ss_pred HHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChhhcccHhHHHHhhhhEEEcCCcc
Confidence 33444433344579999999999999997722 478899988765432 2233344444444444444
No 193
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.29 E-value=0.032 Score=41.96 Aligned_cols=106 Identities=11% Similarity=0.169 Sum_probs=66.6
Q ss_pred CcccccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCCCCC----------------------
Q 025027 117 DKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------------------- 171 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~~~~---------------------- 171 (259)
...++.=.+.-.++..+ -+.+...-|-||||..+..+. ++| -+..+|+++|.-..
T Consensus 81 adr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylp 160 (227)
T COG4947 81 ADRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLP 160 (227)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhcc
Confidence 33444444555555543 234678899999999999977 777 46778887764321
Q ss_pred ----hhhhhcc-CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccc
Q 025027 172 ----EDEIKAV-KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGW 225 (259)
Q Consensus 172 ----~~~~~~~-~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 225 (259)
+..+.+. .+.+.++.|..|+..+ ..+.+.+.+ +...++..+.+..|..|.+
T Consensus 161 g~~dp~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l-~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 161 GLADPFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLL-SDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred CCcChHHHHHHhhccEEEEecCcccccc--chHHHHHHh-ccccccHHHHHhccccccc
Confidence 1111111 4458888999888875 456666666 3333455667777777754
No 194
>PLN02606 palmitoyl-protein thioesterase
Probab=96.25 E-value=0.055 Score=44.76 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=58.2
Q ss_pred eeEEEEeccCC--CCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 57 KAVLMISDIYG--DEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 57 ~~vil~~~~~g--~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
.|||++||... .+ +.+..+.+.+.+. |.-+..+-. |.+. .. .++ ...-+.+..+.+.+++.
T Consensus 27 ~PvViwHGlgD~~~~-~~~~~~~~~i~~~~~~pg~~v~i--g~~~-----~~---s~~-----~~~~~Qv~~vce~l~~~ 90 (306)
T PLN02606 27 VPFVLFHGFGGECSN-GKVSNLTQFLINHSGYPGTCVEI--GNGV-----QD---SLF-----MPLRQQASIACEKIKQM 90 (306)
T ss_pred CCEEEECCCCcccCC-chHHHHHHHHHhCCCCCeEEEEE--CCCc-----cc---ccc-----cCHHHHHHHHHHHHhcc
Confidence 57899998763 33 4677788777533 654444433 2111 00 111 11124566666666552
Q ss_pred --CCCcEEEEeechhHHHHHHHh---cC-cccceEEEecC
Q 025027 134 --GVSAVGAAGFCWGGKVAVKLA---SN-QDVQAAVLLHP 167 (259)
Q Consensus 134 --~~~~i~l~G~S~Gg~~a~~~a---~~-~~i~~~i~~~~ 167 (259)
-.+-+.++|||+||.++-.++ .. |.++..|.+.+
T Consensus 91 ~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 91 KELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred hhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 124699999999999999888 23 67999998764
No 195
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.23 E-value=0.068 Score=44.31 Aligned_cols=98 Identities=15% Similarity=0.130 Sum_probs=59.9
Q ss_pred CeeEEEEeccCCCC-chhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 56 KKAVLMISDIYGDE-PPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 56 ~~~vil~~~~~g~~-~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
..|+|++||....- .+.+..+.+.+.+. |.-+.++.. |.+.. ..|+. ..-+.+..+.+.+++.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i--g~~~~--------~s~~~-----~~~~Qve~vce~l~~~ 89 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI--GNGVG--------DSWLM-----PLTQQAEIACEKVKQM 89 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE--CCCcc--------cccee-----CHHHHHHHHHHHHhhc
Confidence 35788888864422 23566677766543 666666654 33211 11111 1124555666666542
Q ss_pred --CCCcEEEEeechhHHHHHHHh---cC-cccceEEEecCC
Q 025027 134 --GVSAVGAAGFCWGGKVAVKLA---SN-QDVQAAVLLHPS 168 (259)
Q Consensus 134 --~~~~i~l~G~S~Gg~~a~~~a---~~-~~i~~~i~~~~~ 168 (259)
-.+-+.++|||+||.++-.++ .+ |.++..|.+.+.
T Consensus 90 ~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 90 KELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred hhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 123699999999999999887 23 679999997753
No 196
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.97 E-value=0.023 Score=45.73 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=38.4
Q ss_pred EEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 182 IAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 182 vl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
+.++.+++|..+|+.....+.+.++ | +++...+ .||--...... ..+...|.+=|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP---g--~eVr~~e-gGHVsayl~k~---------dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP---G--CEVRYLE-GGHVSAYLFKQ---------DLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC---C--CEEEEee-cCceeeeehhc---------hHHHHHHHHHHHh
Confidence 6778899999999999999999883 4 4555666 48854333222 4455555555554
No 197
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.92 E-value=0.038 Score=44.15 Aligned_cols=71 Identities=17% Similarity=0.102 Sum_probs=40.6
Q ss_pred cHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHhc-------CcccceEEEecCCCCChhhhh---ccCCcEEEeecCCC
Q 025027 122 DAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLAS-------NQDVQAAVLLHPSNVTEDEIK---AVKVPIAVLGAERD 190 (259)
Q Consensus 122 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~-------~~~i~~~i~~~~~~~~~~~~~---~~~~Pvl~i~g~~D 190 (259)
++...+..+..+ +..+|.+.|||+||.+|..++. ..++.++..-.|.....+... ....-++-+.-.+|
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~~~~a~~~~~~~~~~~rvv~~~D 192 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGNAAFAEYLESTKGRVYRVVHGND 192 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCCHHHHHHhhccCCCEEEEEECCC
Confidence 344444444333 4568999999999999999772 224554444444443333222 33334555555577
Q ss_pred CC
Q 025027 191 NG 192 (259)
Q Consensus 191 ~~ 192 (259)
.+
T Consensus 193 ~V 194 (229)
T cd00519 193 IV 194 (229)
T ss_pred cc
Confidence 65
No 198
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.89 E-value=0.056 Score=45.71 Aligned_cols=102 Identities=24% Similarity=0.342 Sum_probs=66.4
Q ss_pred eeeCCeeeEEe--CCCC----C-CeeEEEEeccCCCCchhHHHHHHHHHhc---C------CEEEeeccCCCCCCCCCCC
Q 025027 40 TELGGLKAYVT--GPPH----S-KKAVLMISDIYGDEPPIYRSVADKVAGA---G------FLVVAPDFFHGDAANPSNP 103 (259)
Q Consensus 40 ~~~~~~~~~~~--~~~~----~-~~~vil~~~~~g~~~~~~~~~a~~la~~---G------~~v~~~d~~~g~~~~~~~~ 103 (259)
+++.|++.++. .|+. . -.|++++||+.|+-.+ +..+...|-.. | |.|++|.. .|.+++....
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E-FykfIPlLT~p~~hg~~~d~~FEVI~PSl-PGygwSd~~s 206 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE-FYKFIPLLTDPKRHGNESDYAFEVIAPSL-PGYGWSDAPS 206 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHH-HHhhhhhhcCccccCCccceeEEEeccCC-CCcccCcCCc
Confidence 36788887764 3331 1 1479999999998654 34455555433 3 88999999 5777766554
Q ss_pred CcchhhhhhccCCCcccccHHHHHHH-HHHcCCCcEEEEeechhHHHHHHHh
Q 025027 104 KYDKDTWRKNHTTDKGYEDAKPVIAA-LKAKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~d~~~~i~~-l~~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+..++.. ....++.. +...+..+..|=|-.||..++..+|
T Consensus 207 k~GFn~~-----------a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snla 247 (469)
T KOG2565|consen 207 KTGFNAA-----------ATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLA 247 (469)
T ss_pred cCCccHH-----------HHHHHHHHHHHHhCcceeEeecCchHHHHHHHHH
Confidence 4443221 12223333 3344788999999999999999988
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.88 E-value=0.016 Score=42.26 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh
Q 025027 122 DAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 122 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a 154 (259)
.+...+..+.+. ...+|.+.|||+||.+|..++
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAA 82 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHH
Confidence 334444444333 447899999999999999977
No 200
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.82 E-value=0.22 Score=42.94 Aligned_cols=100 Identities=16% Similarity=0.131 Sum_probs=64.6
Q ss_pred eEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCC
Q 025027 58 AVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGV 135 (259)
Q Consensus 58 ~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (259)
|.|+...|++.. .+......+-|. -+-+.+.+| .+.+..... .|.. .++.+.+.|.=.+++.++..-.
T Consensus 64 PtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~------DW~~-Lti~QAA~D~Hri~~A~K~iY~ 133 (448)
T PF05576_consen 64 PTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPA------DWSY-LTIWQAASDQHRIVQAFKPIYP 133 (448)
T ss_pred CeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCC------Cccc-ccHhHhhHHHHHHHHHHHhhcc
Confidence 456666667643 223334444443 446777776 344443332 2222 3457778899999999988766
Q ss_pred CcEEEEeechhHHHHHHHh-cCc-ccceEEEecC
Q 025027 136 SAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHP 167 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~ 167 (259)
.+-+--|-|=||++++..= -.| ++.+.|.+..
T Consensus 134 ~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 134 GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred CCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 7888999999999987765 334 7888888543
No 201
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.80 E-value=0.017 Score=48.55 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=68.8
Q ss_pred CCCcEEEEeechhHHHHHHHh-cCcccceEEEec-----------------C-CCCC-----------------------
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLH-----------------P-SNVT----------------------- 171 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~i~~~-----------------~-~~~~----------------------- 171 (259)
...+..+-|-|--|..++..| .+|++.+++.+. | ....
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~ 311 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLL 311 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHH
Confidence 456899999999999999987 889999888632 1 1100
Q ss_pred ----h------hhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCcccc
Q 025027 172 ----E------DEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWT 226 (259)
Q Consensus 172 ----~------~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 226 (259)
+ .-..+...|-.++.++.|++++++.+..+.+.|+ | .+.+...|+..|...
T Consensus 312 ~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LP---G-~kaLrmvPN~~H~~~ 372 (507)
T COG4287 312 EIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLP---G-EKALRMVPNDPHNLI 372 (507)
T ss_pred HhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCC---C-ceeeeeCCCCcchhh
Confidence 0 0124567899999999999999999999999984 4 446889999999764
No 202
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.80 E-value=0.012 Score=45.94 Aligned_cols=73 Identities=19% Similarity=0.203 Sum_probs=44.4
Q ss_pred HHHHHHhcCCEEEeeccCCCC--CCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc--CCCcEEEEeechhHHHHH
Q 025027 76 VADKVAGAGFLVVAPDFFHGD--AANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAV 151 (259)
Q Consensus 76 ~a~~la~~G~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~ 151 (259)
.+..|++. ..|++|-||.-. .......... ....+....|+.++.++-.++ +.++++|.|||+|+.+..
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~------~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~ 110 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDA------EKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLL 110 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchh------HHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHH
Confidence 44455544 788888886221 1110111110 111245557888777775443 457999999999999999
Q ss_pred HHhc
Q 025027 152 KLAS 155 (259)
Q Consensus 152 ~~a~ 155 (259)
.+..
T Consensus 111 ~LL~ 114 (207)
T PF11288_consen 111 RLLK 114 (207)
T ss_pred HHHH
Confidence 9883
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.62 E-value=0.016 Score=44.53 Aligned_cols=73 Identities=15% Similarity=0.090 Sum_probs=44.7
Q ss_pred ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHhcC--------cccceEEEecCCCCCh---hhhhccCCcEEEeecC
Q 025027 121 EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLASN--------QDVQAAVLLHPSNVTE---DEIKAVKVPIAVLGAE 188 (259)
Q Consensus 121 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~--------~~i~~~i~~~~~~~~~---~~~~~~~~Pvl~i~g~ 188 (259)
.++...|+...+. +..+|+|+|+|+|+.++..++.. .+|.+++++.-..... .........++-++-.
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~~~~~~~~~~~~~~C~~ 144 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQPGIPGDYSDRVRSYCNP 144 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTTTBTCSCGGGEEEE-BT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCccccCcccccceeEEcCC
Confidence 4555556555555 45699999999999999998743 3788888876332211 1111223357777777
Q ss_pred CCCCC
Q 025027 189 RDNGL 193 (259)
Q Consensus 189 ~D~~~ 193 (259)
.|.+.
T Consensus 145 gD~vC 149 (179)
T PF01083_consen 145 GDPVC 149 (179)
T ss_dssp T-GGG
T ss_pred CCccc
Confidence 77765
No 204
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.62 E-value=0.019 Score=51.58 Aligned_cols=90 Identities=12% Similarity=0.107 Sum_probs=56.8
Q ss_pred hHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CCCcEEEEeechhHHHH
Q 025027 72 IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFCWGGKVA 150 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a 150 (259)
.|..+.+.|++.||. --|+ .+-+++=...... ....+....+++..|+.+... +.+|++|+||||||.++
T Consensus 157 vw~kLIe~L~~iGY~--~~nL-~gAPYDWRls~~~------le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNM-YMAAYDWRLSFQN------TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eHHHHHHHHHHcCCC--CCce-eecccccccCccc------hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 347899999999997 3344 2322110000000 001133346788999988765 46899999999999999
Q ss_pred HHHhc-----------------CcccceEEEecCCCC
Q 025027 151 VKLAS-----------------NQDVQAAVLLHPSNV 170 (259)
Q Consensus 151 ~~~a~-----------------~~~i~~~i~~~~~~~ 170 (259)
+.+.. +..|+++|.++|.+.
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 98652 114788888877543
No 205
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.56 E-value=0.019 Score=49.93 Aligned_cols=69 Identities=14% Similarity=0.178 Sum_probs=47.9
Q ss_pred hHHHHHHHHHhcCCE------EEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc-CCCcEEEEeec
Q 025027 72 IYRSVADKVAGAGFL------VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK-GVSAVGAAGFC 144 (259)
Q Consensus 72 ~~~~~a~~la~~G~~------v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S 144 (259)
.|..+.+.++.-||. -+.+|+|.+... ....++...+++..|+...+. +.+|++|++||
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~--------------~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHS 190 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHN--------------SEERDQYLSKLKKKIETMYKLNGGKKVVLISHS 190 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCC--------------hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecC
Confidence 556777888888887 334455422110 011245557788888888776 45899999999
Q ss_pred hhHHHHHHHh
Q 025027 145 WGGKVAVKLA 154 (259)
Q Consensus 145 ~Gg~~a~~~a 154 (259)
||+.+++.+.
T Consensus 191 MG~l~~lyFl 200 (473)
T KOG2369|consen 191 MGGLYVLYFL 200 (473)
T ss_pred CccHHHHHHH
Confidence 9999999987
No 206
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=95.16 E-value=1 Score=37.17 Aligned_cols=71 Identities=15% Similarity=0.045 Sum_probs=45.0
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
++-++-+-|++|.+.-..+.+...+....-+....+...-|++||.=. -.+. .-.+.....+.+|+.++-+
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGV-FnGs------rfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGV-FNGS------RFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccce-eccc------hHHHHHHHHHHHHHHHhCc
Confidence 345788889999986554555544444222222345667789999322 1222 3468899999999988754
No 207
>PLN02847 triacylglycerol lipase
Probab=94.87 E-value=0.11 Score=46.78 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=18.7
Q ss_pred CCCcEEEEeechhHHHHHHHh
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+.-+|.+.|||+||.+|..++
T Consensus 249 PdYkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred CCCeEEEeccChHHHHHHHHH
Confidence 456999999999999999977
No 208
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.37 E-value=0.4 Score=37.57 Aligned_cols=85 Identities=15% Similarity=0.191 Sum_probs=46.3
Q ss_pred HHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH-HcCCCcEEEEeechhHHHHHHHh-
Q 025027 77 ADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK-AKGVSAVGAAGFCWGGKVAVKLA- 154 (259)
Q Consensus 77 a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~-~~~~~~i~l~G~S~Gg~~a~~~a- 154 (259)
.++--+.||-|++.+.-...-.. +..+.+. .-....++.+..+...+- ......+.++.||+||..++.+.
T Consensus 137 i~rAv~~Gygviv~N~N~~~kfy-e~k~np~------kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~ 209 (297)
T KOG3967|consen 137 IKRAVAEGYGVIVLNPNRERKFY-EKKRNPQ------KYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVE 209 (297)
T ss_pred HHHHHHcCCcEEEeCCchhhhhh-hcccCcc------hhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHH
Confidence 45555669999999872111111 1000000 001122233444333332 22567899999999999999988
Q ss_pred c---CcccceEEEecCC
Q 025027 155 S---NQDVQAAVLLHPS 168 (259)
Q Consensus 155 ~---~~~i~~~i~~~~~ 168 (259)
+ +.+|-++.+-...
T Consensus 210 ~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 210 RFPDDESVFAIALTDSA 226 (297)
T ss_pred hcCCccceEEEEeeccc
Confidence 2 2466666655443
No 209
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.27 E-value=0.15 Score=44.53 Aligned_cols=111 Identities=16% Similarity=0.079 Sum_probs=59.7
Q ss_pred CCCeeEEEEeccCCCCchhHHHHH-------------------HHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhcc
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVA-------------------DKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 114 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a-------------------~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 114 (259)
..+|.+|.+.||+|... .+..+. ..+.+ -..++.+|.+-|.|.+....... ...
T Consensus 38 ~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~PvGtGfS~~~~~~~-----~~~ 110 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQPVGTGFSYGNDPSD-----YVW 110 (415)
T ss_dssp CSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--STTSTT-EESSGGG-----GS-
T ss_pred CCccEEEEecCCceecc-ccccccccCceEEeeccccccccccccccc-ccceEEEeecCceEEeecccccc-----ccc
Confidence 34578889999999753 222211 11222 26677778765666554332221 001
Q ss_pred CCCcccccHHHHHHHHHHc----CCCcEEEEeechhHHHHHHHhc-----C-------cccceEEEecCCCCC
Q 025027 115 TTDKGYEDAKPVIAALKAK----GVSAVGAAGFCWGGKVAVKLAS-----N-------QDVQAAVLLHPSNVT 171 (259)
Q Consensus 115 ~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~-----~-------~~i~~~i~~~~~~~~ 171 (259)
+.++..+++..++...-++ ...++.|.|-|+||..+-.+|. . -+++++++.+|...+
T Consensus 111 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 111 NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 1233344444444444332 3458999999999999877761 1 258999998887654
No 210
>PLN02454 triacylglycerol lipase
Probab=93.72 E-value=0.26 Score=42.79 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=25.0
Q ss_pred cccHHHHHHHHHHc-CCC--cEEEEeechhHHHHHHHh
Q 025027 120 YEDAKPVIAALKAK-GVS--AVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 120 ~~d~~~~i~~l~~~-~~~--~i~l~G~S~Gg~~a~~~a 154 (259)
.+++...++.+.+. ... +|.+.|||+||.+|...|
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA 246 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAA 246 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHH
Confidence 34555555555543 222 599999999999999987
No 211
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.06 E-value=0.35 Score=41.12 Aligned_cols=60 Identities=22% Similarity=0.186 Sum_probs=43.3
Q ss_pred CCCcEEEEeechhHHHHHHHh----cC---cccceEEEecCCCC-Chhhh----hccCCcEEEeecCCCCCC
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA----SN---QDVQAAVLLHPSNV-TEDEI----KAVKVPIAVLGAERDNGL 193 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a----~~---~~i~~~i~~~~~~~-~~~~~----~~~~~Pvl~i~g~~D~~~ 193 (259)
+.++|.|+|||+|+.+.+... .. .-|+.++++..... ....+ .-++.++.-+|.++|.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS~~D~vL 289 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYSENDWVL 289 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEecCcHHHH
Confidence 566899999999999999866 12 24777887765433 33333 235779999999999874
No 212
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.96 E-value=0.22 Score=37.13 Aligned_cols=34 Identities=12% Similarity=0.183 Sum_probs=28.1
Q ss_pred CcEEEEeechhHHHHHHHhcCcccceEEEecCCC
Q 025027 136 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSN 169 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~ 169 (259)
+.|-++.+|||-.++-++.+.-+++..++++|..
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~lksatAiNGTg 90 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIRLKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhccccceeeecCCC
Confidence 4688999999999999998777777788777653
No 213
>PLN02310 triacylglycerol lipase
Probab=92.82 E-value=0.077 Score=45.81 Aligned_cols=61 Identities=18% Similarity=0.296 Sum_probs=36.5
Q ss_pred CcEEEEeechhHHHHHHHhcC-----ccc-ceEEEecCCCCCh----hhhhccCCcEEEeecCCCCC--CChH
Q 025027 136 SAVGAAGFCWGGKVAVKLASN-----QDV-QAAVLLHPSNVTE----DEIKAVKVPIAVLGAERDNG--LPPA 196 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~-----~~i-~~~i~~~~~~~~~----~~~~~~~~Pvl~i~g~~D~~--~~~~ 196 (259)
.+|.+.|||+||.+|...+.+ +.+ -.++.|.+..... +.+.+....++=+.-..|.+ +|+.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~RVvn~~DiVP~lPp~ 281 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLRVVVKQDKVPKLPGL 281 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEEEEECCCccCccCcc
Confidence 489999999999999997721 221 1244444332221 22333445666666678865 6653
No 214
>PLN02209 serine carboxypeptidase
Probab=92.76 E-value=0.68 Score=40.90 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=27.6
Q ss_pred CCcEEEEeechhHHHHHHHhc-----C-----c--ccceEEEecCCCCC
Q 025027 135 VSAVGAAGFCWGGKVAVKLAS-----N-----Q--DVQAAVLLHPSNVT 171 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~-----~-----~--~i~~~i~~~~~~~~ 171 (259)
..++.|.|.|+||..+-.+|. + + .++++++.+|...+
T Consensus 166 ~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 166 SNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred CCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 358999999999987777661 1 1 57888888876543
No 215
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=92.55 E-value=0.64 Score=41.01 Aligned_cols=110 Identities=15% Similarity=0.074 Sum_probs=70.3
Q ss_pred CeeEEEEeccCCCCchhH----HHHHHHHHhc-CCEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHH
Q 025027 56 KKAVLMISDIYGDEPPIY----RSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAA 129 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~----~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~ 129 (259)
..|+.++.||-|.-...| ...--.+|++ |-.|+...+| +|.+.+...... .. ++..+..+++.|+.++|+.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st--~n-lk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLST--SN-LKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcc--cc-hhhhhHHHHHHHHHHHHHH
Confidence 346777777777432212 1122234444 8889999998 787644332221 11 4555668889999999999
Q ss_pred HHHc----CCCcEEEEeechhHHHHHHHh-cCc-ccceEEEecCC
Q 025027 130 LKAK----GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPS 168 (259)
Q Consensus 130 l~~~----~~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~i~~~~~ 168 (259)
+..+ +..+.+..|-|+-|.++..+= ..| -+.+.++.++.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 9876 335899999999887776654 556 45555555443
No 216
>PLN00413 triacylglycerol lipase
Probab=92.36 E-value=0.21 Score=43.96 Aligned_cols=22 Identities=23% Similarity=0.350 Sum_probs=19.2
Q ss_pred cCCCcEEEEeechhHHHHHHHh
Q 025027 133 KGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 133 ~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
.+..+|.+.|||+||++|..++
T Consensus 281 ~p~~kliVTGHSLGGALAtLaA 302 (479)
T PLN00413 281 NPTSKFILSGHSLGGALAILFT 302 (479)
T ss_pred CCCCeEEEEecCHHHHHHHHHH
Confidence 3556899999999999999976
No 217
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.23 E-value=0.39 Score=42.72 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=38.9
Q ss_pred CcEEEEeechhHHHHHHHhc-----Cccc--ceEEEecC-CCCCh---hhhhccCCcEEEeecCCCCC--CChHHH
Q 025027 136 SAVGAAGFCWGGKVAVKLAS-----NQDV--QAAVLLHP-SNVTE---DEIKAVKVPIAVLGAERDNG--LPPAQM 198 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~-----~~~i--~~~i~~~~-~~~~~---~~~~~~~~Pvl~i~g~~D~~--~~~~~~ 198 (259)
.+|.+.|||+||.+|...|. .+.. -.++.|.. ..... +.+......++=+.-..|.+ +|+...
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~~~lRVVN~~DiVP~lPp~~~ 393 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGVKVLRVVNKQDIVPKLPGIIF 393 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCCCEEEEEECCCccccCCchhh
Confidence 47999999999999999872 2222 22344432 22222 23344456778777888976 666433
No 218
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.04 E-value=0.4 Score=37.02 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=58.7
Q ss_pred cceEEEecCCCCChhhhhccCCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhh
Q 025027 159 VQAAVLLHPSNVTEDEIKAVKVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVN 238 (259)
Q Consensus 159 i~~~i~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~ 238 (259)
.++...+.+....+..+. +.++|-+-|++|.+..+-+.....+....-+......++.+|+||.=.- .+. .
T Consensus 116 ~~G~~~~~Gr~Vdp~aI~--~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF-~G~------r 186 (202)
T PF06850_consen 116 PRGTWTVRGRPVDPAAIR--RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLF-NGS------R 186 (202)
T ss_pred cCCceEECCEEcchHHcc--cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecc-cch------h
Confidence 445555555554444443 5678889999999998888877777764333345567788999993221 111 3
Q ss_pred HHHHHHHHHHHHHHHh
Q 025027 239 SAAEAHEDMINWFEKH 254 (259)
Q Consensus 239 ~~~~~~~~~~~fl~~~ 254 (259)
..++++..+.+|+.++
T Consensus 187 wr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 187 WREEIYPRIREFIRQH 202 (202)
T ss_pred hhhhhhHHHHHHHHhC
Confidence 5688999999998764
No 219
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=91.92 E-value=0.21 Score=43.95 Aligned_cols=136 Identities=19% Similarity=0.119 Sum_probs=72.8
Q ss_pred CCccCCCCCCCCCCCC------ceEeeeCCeeeEEeCC--CCCCeeEEEEeccCCC--Cchh-HHHHHHHHHhc-CCEEE
Q 025027 21 APCYREPPPFCPTCGA------GTVTELGGLKAYVTGP--PHSKKAVLMISDIYGD--EPPI-YRSVADKVAGA-GFLVV 88 (259)
Q Consensus 21 ~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~--~~~~~~vil~~~~~g~--~~~~-~~~~a~~la~~-G~~v~ 88 (259)
..|++..+.--|..+. .+-...|.+-+.+..| +...+.|++.--|.|. ..+. -..-.+.|+.. ..+|+
T Consensus 91 ~~C~Q~~D~yfp~F~GsEMWNpNt~lSEDCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvV 170 (601)
T KOG4389|consen 91 NTCYQTRDTYFPGFWGSEMWNPNTELSEDCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVV 170 (601)
T ss_pred hhhhccccccCCCCCcccccCCCCCcChhceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEE
Confidence 4566665554433221 1223446666666666 2223444444333332 1111 11234566665 58888
Q ss_pred eeccCCC-CCC-----CCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHh--
Q 025027 89 APDFFHG-DAA-----NPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLA-- 154 (259)
Q Consensus 89 ~~d~~~g-~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a-- 154 (259)
.++||-| .|. .++ ...+++- -|-+-++.|++++ ++.+|.|.|-|.|+..+..-.
T Consensus 171 s~NYRvG~FGFL~l~~~~e-aPGNmGl-----------~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLls 238 (601)
T KOG4389|consen 171 SMNYRVGAFGFLYLPGHPE-APGNMGL-----------LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLS 238 (601)
T ss_pred EeeeeeccceEEecCCCCC-CCCccch-----------HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecC
Confidence 9998722 121 111 1112222 3556688898876 678999999999998887743
Q ss_pred --cCcccceEEEecCC
Q 025027 155 --SNQDVQAAVLLHPS 168 (259)
Q Consensus 155 --~~~~i~~~i~~~~~ 168 (259)
+++-++..|+=+|+
T Consensus 239 P~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 239 PGSRGLFHRAILQSGS 254 (601)
T ss_pred CCchhhHHHHHhhcCC
Confidence 23345555554444
No 220
>PLN02162 triacylglycerol lipase
Probab=91.80 E-value=0.24 Score=43.51 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=18.5
Q ss_pred CCCcEEEEeechhHHHHHHHh
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+..++.+.|||+||.+|..++
T Consensus 276 p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred CCceEEEEecChHHHHHHHHH
Confidence 456899999999999999865
No 221
>PLN02934 triacylglycerol lipase
Probab=90.96 E-value=0.32 Score=43.14 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=23.4
Q ss_pred HHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh
Q 025027 123 AKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 123 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+...++.+.+. +..+|.+.|||+||.+|..++
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 34444444333 456999999999999999986
No 222
>PLN02408 phospholipase A1
Probab=90.73 E-value=0.31 Score=41.67 Aligned_cols=57 Identities=11% Similarity=0.127 Sum_probs=32.9
Q ss_pred CcEEEEeechhHHHHHHHhcC-----cc--cceEEEecCCCC-Ch---hhhhccCCcEEEeecCCCCC
Q 025027 136 SAVGAAGFCWGGKVAVKLASN-----QD--VQAAVLLHPSNV-TE---DEIKAVKVPIAVLGAERDNG 192 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~-----~~--i~~~i~~~~~~~-~~---~~~~~~~~Pvl~i~g~~D~~ 192 (259)
.+|.+.|||+||.+|...|.+ +. .-.++.+.+... .. +.+......++=+.-..|.+
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~~~~~~lRVvN~~D~V 267 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEKQGTKVLRIVNSDDVI 267 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEEEEeCCCCc
Confidence 369999999999999998721 11 122444443322 21 22333344566666667754
No 223
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.55 E-value=0.7 Score=39.74 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=48.7
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhc--CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
.+...+++.||..|.....+...+....+. +..++.-... +.-....+... ++. . .....+++.+.
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~-~~~~~T~~Gv~----~lG----~---Rla~~~~e~~~ 145 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKM-NNMCQTFDGVD----VLG----E---RLAEEVKETLY 145 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccc-cchhhccccce----eee----c---ccHHHHhhhhh
Confidence 334578999999994445667777777766 4433333331 11111111000 111 0 22333444444
Q ss_pred HcCCCcEEEEeechhHHHHHHHh
Q 025027 132 AKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 132 ~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
.....+|-.+|||+||.++-.+.
T Consensus 146 ~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 146 DYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccccceeeeeeeecCCeeeeEEE
Confidence 33457999999999998876644
No 224
>PLN02571 triacylglycerol lipase
Probab=90.42 E-value=0.34 Score=42.07 Aligned_cols=18 Identities=22% Similarity=0.314 Sum_probs=16.9
Q ss_pred cEEEEeechhHHHHHHHh
Q 025027 137 AVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a 154 (259)
+|.+.|||+||.+|...|
T Consensus 227 sI~VTGHSLGGALAtLaA 244 (413)
T PLN02571 227 SITICGHSLGAALATLNA 244 (413)
T ss_pred cEEEeccchHHHHHHHHH
Confidence 799999999999999977
No 225
>PF03283 PAE: Pectinacetylesterase
Probab=90.09 E-value=1 Score=38.74 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=28.7
Q ss_pred ccHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh
Q 025027 121 EDAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 121 ~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a 154 (259)
.-+++++++|..+ +.++|.|.|-|.||.-++.-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4578899998765 467999999999999999865
No 226
>PLN02719 triacylglycerol lipase
Probab=89.01 E-value=0.49 Score=42.06 Aligned_cols=19 Identities=32% Similarity=0.461 Sum_probs=17.5
Q ss_pred CcEEEEeechhHHHHHHHh
Q 025027 136 SAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a 154 (259)
.+|.+.|||+||.+|...|
T Consensus 298 ~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSA 316 (518)
T ss_pred ceEEEecCcHHHHHHHHHH
Confidence 3899999999999999977
No 227
>PLN02324 triacylglycerol lipase
Probab=89.00 E-value=0.49 Score=41.07 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHHc--C-CCcEEEEeechhHHHHHHHh
Q 025027 121 EDAKPVIAALKAK--G-VSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 121 ~d~~~~i~~l~~~--~-~~~i~l~G~S~Gg~~a~~~a 154 (259)
+.+.+.+..+... + ..+|.+.|||+||.+|...|
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSA 233 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHH
Confidence 3344444444432 2 23799999999999999977
No 228
>PLN02753 triacylglycerol lipase
Probab=88.85 E-value=0.27 Score=43.76 Aligned_cols=19 Identities=26% Similarity=0.455 Sum_probs=17.8
Q ss_pred CcEEEEeechhHHHHHHHh
Q 025027 136 SAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a 154 (259)
.+|.+.|||+||.+|...|
T Consensus 312 ~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 312 LSITVTGHSLGGALAILSA 330 (531)
T ss_pred ceEEEEccCHHHHHHHHHH
Confidence 5899999999999999987
No 229
>PLN02761 lipase class 3 family protein
Probab=88.09 E-value=0.33 Score=43.20 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=17.5
Q ss_pred CcEEEEeechhHHHHHHHh
Q 025027 136 SAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a 154 (259)
.+|.+.|||+||.+|...|
T Consensus 294 ~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 294 ISITVTGHSLGASLALVSA 312 (527)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 4899999999999999877
No 230
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=87.80 E-value=1.9 Score=38.14 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=27.4
Q ss_pred CCcEEEEeechhHHHHHHHhc-----C-----c--ccceEEEecCCCC
Q 025027 135 VSAVGAAGFCWGGKVAVKLAS-----N-----Q--DVQAAVLLHPSNV 170 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~-----~-----~--~i~~~i~~~~~~~ 170 (259)
..++.|.|.|+||..+-.+|. + + .++++++-+|...
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred CCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 457999999999998777761 1 1 6788888887653
No 231
>PLN02802 triacylglycerol lipase
Probab=87.75 E-value=0.65 Score=41.30 Aligned_cols=19 Identities=21% Similarity=0.394 Sum_probs=17.4
Q ss_pred CcEEEEeechhHHHHHHHh
Q 025027 136 SAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a 154 (259)
.+|.+.|||+||.++...+
T Consensus 330 ~sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 330 LSITVTGHSLGAALALLVA 348 (509)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 3799999999999999977
No 232
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=87.09 E-value=1.1 Score=36.69 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=32.5
Q ss_pred ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHhcCcccceEEEecCC
Q 025027 121 EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPS 168 (259)
Q Consensus 121 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~ 168 (259)
.+..+++..++.. +..+|.+-|||+||.+|..+...-.+-.+..-+|.
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPG 308 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEEecCch
Confidence 3344444444444 45699999999999999998866666655554543
No 233
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=87.09 E-value=1.1 Score=36.69 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=32.5
Q ss_pred ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHhcCcccceEEEecCC
Q 025027 121 EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPS 168 (259)
Q Consensus 121 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~ 168 (259)
.+..+++..++.. +..+|.+-|||+||.+|..+...-.+-.+..-+|.
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPG 308 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEEecCch
Confidence 3344444444444 45699999999999999998866666655554543
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=84.82 E-value=1.2 Score=37.92 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=25.5
Q ss_pred ccHHHHHHHHHHc-CCCcEEEEeechhHHHHHHHh
Q 025027 121 EDAKPVIAALKAK-GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 121 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a 154 (259)
..+.+.++.|... +.-+|.+-|||+||.+|...|
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHH
Confidence 3455555555443 456899999999999999987
No 235
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=81.64 E-value=2.6 Score=26.23 Aligned_cols=16 Identities=19% Similarity=0.272 Sum_probs=6.6
Q ss_pred CCeeEEEEeccCCCCc
Q 025027 55 SKKAVLMISDIYGDEP 70 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~ 70 (259)
++++|++.||..++..
T Consensus 42 ~k~pVll~HGL~~ss~ 57 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSD 57 (63)
T ss_dssp T--EEEEE--TT--GG
T ss_pred CCCcEEEECCcccChH
Confidence 3567777777777653
No 236
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=80.93 E-value=7.3 Score=34.58 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=56.8
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhc------------------CCEEEeeccCCCCCCCCCCCCcchhhhhhccC
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGA------------------GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 115 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~------------------G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 115 (259)
..+|.||.+-||+|... ...+..++... --.++..|.+-|.|.+......+.. ..
T Consensus 71 ~~dPlvLWLnGGPGCSS--l~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-----~~ 143 (454)
T KOG1282|consen 71 ETDPLVLWLNGGPGCSS--LGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-----TG 143 (454)
T ss_pred CCCCEEEEeCCCCCccc--hhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-----CC
Confidence 34577888889999752 12222221110 1345666665566555433222111 11
Q ss_pred CCcccccHH-HHHHHHHHc---CCCcEEEEeechhHHHHHHHhc-----C-----c--ccceEEEec
Q 025027 116 TDKGYEDAK-PVIAALKAK---GVSAVGAAGFCWGGKVAVKLAS-----N-----Q--DVQAAVLLH 166 (259)
Q Consensus 116 ~~~~~~d~~-~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-----~-----~--~i~~~i~~~ 166 (259)
.+...+|.- .+++|+.+. ....+.|.|-|++|..+-.+|. + + ++++++.-+
T Consensus 144 D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGN 210 (454)
T KOG1282|consen 144 DDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGN 210 (454)
T ss_pred cHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecC
Confidence 122223333 344445443 3468999999999988877761 1 2 577777733
No 237
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=80.67 E-value=11 Score=31.09 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=28.3
Q ss_pred ccccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHh
Q 025027 119 GYEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 119 ~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a 154 (259)
....+..++.++.+. +.++|.++|||-|+.+|-.++
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a 110 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFA 110 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHH
Confidence 345666777777554 567899999999999999887
No 238
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=78.29 E-value=14 Score=33.09 Aligned_cols=39 Identities=21% Similarity=0.146 Sum_probs=28.4
Q ss_pred CCcccccHHHHHHHHHHc------CCCcEEEEeechhHHHHHHHh
Q 025027 116 TDKGYEDAKPVIAALKAK------GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+...-+|+..+.+.+... ..++..|+|-|+||.-+-.+|
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHH
Confidence 345557777766665432 235899999999999888877
No 239
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=78.10 E-value=4.4 Score=29.11 Aligned_cols=42 Identities=21% Similarity=0.317 Sum_probs=27.8
Q ss_pred CCeeeEEeCCCCCCeeEEEEeccCCCCchhH-HHHHHHHHhcC
Q 025027 43 GGLKAYVTGPPHSKKAVLMISDIYGDEPPIY-RSVADKVAGAG 84 (259)
Q Consensus 43 ~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~-~~~a~~la~~G 84 (259)
+.+..|+..+...+|.|+-+||+.|...+.. +-+|+.|-+.|
T Consensus 39 ~ai~~~l~~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 39 NAIKGHLANPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred HHHHHHHcCCCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 4567777666555677888888888654433 33677766666
No 240
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=77.61 E-value=8.2 Score=38.40 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 54 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
+..|+++++|..-|... .+..++.++. +-.+....-... + .+.........|+.+++.
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle---~PaYglQ~T~~v------P------------~dSies~A~~yirqirkv 2178 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE---IPAYGLQCTEAV------P------------LDSIESLAAYYIRQIRKV 2178 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC---CcchhhhccccC------C------------cchHHHHHHHHHHHHHhc
Confidence 34578999999888763 3444444332 222222221000 0 111112345567777765
Q ss_pred -CCCcEEEEeechhHHHHHHHhc----CcccceEEEecCCC
Q 025027 134 -GVSAVGAAGFCWGGKVAVKLAS----NQDVQAAVLLHPSN 169 (259)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a~----~~~i~~~i~~~~~~ 169 (259)
+..+.-+.|+|+|+.+++.++. ......+|++.|.+
T Consensus 2179 QP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2179 QPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred CCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 4458899999999999999882 23455688888764
No 241
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=77.59 E-value=6.2 Score=31.36 Aligned_cols=30 Identities=13% Similarity=0.136 Sum_probs=21.1
Q ss_pred ccHHHHHHHHHHc-------CCCcEEEEeechhHHHHH
Q 025027 121 EDAKPVIAALKAK-------GVSAVGAAGFCWGGKVAV 151 (259)
Q Consensus 121 ~d~~~~i~~l~~~-------~~~~i~l~G~S~Gg~~a~ 151 (259)
.-++++|||+... ..++++++|.| ||..+.
T Consensus 107 g~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~g~ 143 (219)
T TIGR02690 107 GSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQSF 143 (219)
T ss_pred HHHHHHHHhcccCcccccccCCCcEEEEEeC-CcHhHH
Confidence 4578999999753 24679999999 444333
No 242
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=77.05 E-value=4.3 Score=28.54 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=18.5
Q ss_pred eEeeeCCeeeEEe--CCCCC-CeeEEEEeccCCCCch
Q 025027 38 TVTELGGLKAYVT--GPPHS-KKAVLMISDIYGDEPP 71 (259)
Q Consensus 38 ~~~~~~~~~~~~~--~~~~~-~~~vil~~~~~g~~~~ 71 (259)
..+.++|+++++. ++.++ ..|+|++||+.|+-.+
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGG
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHh
Confidence 4557789888875 33333 3579999999997543
No 243
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=75.11 E-value=5 Score=32.06 Aligned_cols=21 Identities=24% Similarity=0.264 Sum_probs=18.5
Q ss_pred CCCcEEEEeechhHHHHHHHh
Q 025027 134 GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a 154 (259)
..+++.++|+|+|+.++...+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~ 66 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVL 66 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHH
Confidence 456899999999999999866
No 244
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=75.04 E-value=5.9 Score=33.47 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=47.4
Q ss_pred EEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc----CCCcEEEEeechhHHHHHHHhc-----C
Q 025027 86 LVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK----GVSAVGAAGFCWGGKVAVKLAS-----N 156 (259)
Q Consensus 86 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~-----~ 156 (259)
.++.+|.+-|.|.+......... .-+..++|+..++...-++ ...++.|.|-|+||..+-.+|. +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~------~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n 76 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKT------GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 76 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCcc------ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhc
Confidence 57888987677766432211100 0112224444444433222 3468999999999998887762 1
Q ss_pred -----c--ccceEEEecCCCCC
Q 025027 157 -----Q--DVQAAVLLHPSNVT 171 (259)
Q Consensus 157 -----~--~i~~~i~~~~~~~~ 171 (259)
+ .+++++.-+|+..+
T Consensus 77 ~~~~~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 77 YICCEPPINLQGYMLGNPVTYM 98 (319)
T ss_pred ccccCCceeeeEEEeCCCCCCc
Confidence 1 67888888876543
No 245
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=74.78 E-value=7.4 Score=29.95 Aligned_cols=61 Identities=21% Similarity=0.346 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc--CCCcEEEEeechhH
Q 025027 71 PIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK--GVSAVGAAGFCWGG 147 (259)
Q Consensus 71 ~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg 147 (259)
+....+.+..+.. |+.+.+|.|.++.+ .-+++++||+... ..+++.+++.|.|+
T Consensus 56 ~~v~~~~~~i~~aD~li~~tPeYn~s~p-----------------------g~lKnaiD~l~~~~~~~Kpv~~~~~s~g~ 112 (184)
T COG0431 56 PAVQALREAIAAADGLIIATPEYNGSYP-----------------------GALKNAIDWLSREALGGKPVLLLGTSGGG 112 (184)
T ss_pred HHHHHHHHHHHhCCEEEEECCccCCCCC-----------------------HHHHHHHHhCCHhHhCCCcEEEEecCCCc
Confidence 3466777777766 78899998843433 4688899999765 45688999999998
Q ss_pred HHHHHHh
Q 025027 148 KVAVKLA 154 (259)
Q Consensus 148 ~~a~~~a 154 (259)
.-.+...
T Consensus 113 ~~~~~a~ 119 (184)
T COG0431 113 AGGLRAQ 119 (184)
T ss_pred hhHHHHH
Confidence 8888765
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.92 E-value=12 Score=33.53 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=43.5
Q ss_pred HHHHHHH--cCCCcEEEEeechhHHHHHHHh----cC---cccceEEEecCC-CCChhhhhc----cCCcEEEeecCCCC
Q 025027 126 VIAALKA--KGVSAVGAAGFCWGGKVAVKLA----SN---QDVQAAVLLHPS-NVTEDEIKA----VKVPIAVLGAERDN 191 (259)
Q Consensus 126 ~i~~l~~--~~~~~i~l~G~S~Gg~~a~~~a----~~---~~i~~~i~~~~~-~~~~~~~~~----~~~Pvl~i~g~~D~ 191 (259)
+.+.|.. ++.++|.|+|||.|+.+.+... .. .-|..++++... ....+.+.+ +..+..-.|.++|+
T Consensus 435 LAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k~r~vVsGRFVNgYs~nDW 514 (633)
T KOG2385|consen 435 LAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLKARSVVSGRFVNGYSTNDW 514 (633)
T ss_pred HHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHHHHhheecceeeeeecchH
Confidence 3444443 3678999999999999998644 21 236666666543 333333333 35677788888888
Q ss_pred CC
Q 025027 192 GL 193 (259)
Q Consensus 192 ~~ 193 (259)
+.
T Consensus 515 ~L 516 (633)
T KOG2385|consen 515 TL 516 (633)
T ss_pred HH
Confidence 64
No 247
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=70.72 E-value=11 Score=34.41 Aligned_cols=75 Identities=9% Similarity=-0.082 Sum_probs=45.7
Q ss_pred CCcEEEeecCCCCCCChH-HHHHHHHHHhcCCC--CCceEEecCCCCccccc--c--CCCCChhhhhHHHHHHHHHHHHH
Q 025027 179 KVPIAVLGAERDNGLPPA-QMKRFDEILSAKPK--FDHLVKTYPGVCHGWTV--R--YFVNDTFAVNSAAEAHEDMINWF 251 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~-~~~~~~~~l~~~~~--~~~~~~~~~g~~H~~~~--~--~~~~~~~~~~~~~~~~~~~~~fl 251 (259)
.+|.+++||..|.++|.. ..+.++...+...+ .+..|..+.++.|.-.. . +...+-..+....++++.+.+||
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 669999999999999853 34444443322222 36788899987773221 1 11111122355677788888888
Q ss_pred HH
Q 025027 252 EK 253 (259)
Q Consensus 252 ~~ 253 (259)
+.
T Consensus 635 ~~ 636 (690)
T PF10605_consen 635 KS 636 (690)
T ss_pred hc
Confidence 75
No 248
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=69.41 E-value=38 Score=26.82 Aligned_cols=60 Identities=17% Similarity=0.256 Sum_probs=35.8
Q ss_pred eeEEEEeccCCC-CchhHHHHHHHHHhcCC-EEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC
Q 025027 57 KAVLMISDIYGD-EPPIYRSVADKVAGAGF-LVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG 134 (259)
Q Consensus 57 ~~vil~~~~~g~-~~~~~~~~a~~la~~G~-~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 134 (259)
..+|++.||... ....|.-+-..|-++|| .|++... .|. -++..+|++++++.
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v-e~y------------------------P~~d~vi~~l~~~~ 192 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV-EGY------------------------PLVDTVIEYLRKNG 192 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe-cCC------------------------CcHHHHHHHHHHcC
Confidence 345555554443 33455556667778888 6666554 232 26778999998875
Q ss_pred CCcEEEE
Q 025027 135 VSAVGAA 141 (259)
Q Consensus 135 ~~~i~l~ 141 (259)
...+.|+
T Consensus 193 ~~~v~L~ 199 (265)
T COG4822 193 IKEVHLI 199 (265)
T ss_pred CceEEEe
Confidence 5544443
No 249
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.23 E-value=5.3 Score=36.35 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=24.2
Q ss_pred cHHHHHHHHHHc---CCCcEEEEeechhHHHHHHHh
Q 025027 122 DAKPVIAALKAK---GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 122 d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a 154 (259)
....+++.|.+. +.++|..+||||||..+=.+.
T Consensus 509 Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 509 RSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 344566666554 367899999999998887755
No 250
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=64.52 E-value=24 Score=29.81 Aligned_cols=64 Identities=14% Similarity=0.125 Sum_probs=45.8
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCC--------------C------CCceEEecCCCCccccccCCCCChhhhh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKP--------------K------FDHLVKTYPGVCHGWTVRYFVNDTFAVN 238 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~--------------~------~~~~~~~~~g~~H~~~~~~~~~~~~~~~ 238 (259)
..+||+-.|+.|.++|.-..+.+.+.|+-.. | ...++.++.||||.. +..+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV--~~qP------- 303 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA--EYRP------- 303 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCC--CcCH-------
Confidence 4799999999999999988999888885211 0 014555556789965 2333
Q ss_pred HHHHHHHHHHHHHHH
Q 025027 239 SAAEAHEDMINWFEK 253 (259)
Q Consensus 239 ~~~~~~~~~~~fl~~ 253 (259)
+.+.+.+-+|+..
T Consensus 304 --~~al~m~~~fi~~ 316 (319)
T PLN02213 304 --NETFIMFQRWISG 316 (319)
T ss_pred --HHHHHHHHHHHcC
Confidence 7788888888854
No 251
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=64.29 E-value=72 Score=27.11 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=27.4
Q ss_pred cccHHHHHHHHHHc--CCCcEEEEeechhHHHHHHHh
Q 025027 120 YEDAKPVIAALKAK--GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 120 ~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a 154 (259)
.+.+..++.+|..+ +.++|.+.|||-|+..+--+|
T Consensus 104 ~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 104 VQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHH
Confidence 34566677777654 568999999999999987766
No 252
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=59.87 E-value=33 Score=30.44 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=46.4
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCC----------C---------CC-ceEEecCCCCccccccCCCCChhhhh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKP----------K---------FD-HLVKTYPGVCHGWTVRYFVNDTFAVN 238 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~----------~---------~~-~~~~~~~g~~H~~~~~~~~~~~~~~~ 238 (259)
..+||+..|+.|.++|.-..+.+.+.|+-.. + .. .++.++.+|||.. +..+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmV--p~qP------- 417 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA--EYRP------- 417 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCC--CCCH-------
Confidence 4699999999999999999999888884211 0 01 4555666789965 2333
Q ss_pred HHHHHHHHHHHHHHH
Q 025027 239 SAAEAHEDMINWFEK 253 (259)
Q Consensus 239 ~~~~~~~~~~~fl~~ 253 (259)
+.+.+.+.+|++.
T Consensus 418 --~~al~m~~~Fi~~ 430 (433)
T PLN03016 418 --NETFIMFQRWISG 430 (433)
T ss_pred --HHHHHHHHHHHcC
Confidence 7888888888864
No 253
>PLN02209 serine carboxypeptidase
Probab=57.53 E-value=38 Score=30.06 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=45.9
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCC----------C---------CC-ceEEecCCCCccccccCCCCChhhhh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKP----------K---------FD-HLVKTYPGVCHGWTVRYFVNDTFAVN 238 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~----------~---------~~-~~~~~~~g~~H~~~~~~~~~~~~~~~ 238 (259)
.+++|+..|+.|.++|.-..+.+.+.++-.. + .. .++.++.||||.. +..+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV--p~qP------- 421 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA--EYLP------- 421 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc--CcCH-------
Confidence 4689999999999999988888888884210 0 12 4555666789965 3333
Q ss_pred HHHHHHHHHHHHHHH
Q 025027 239 SAAEAHEDMINWFEK 253 (259)
Q Consensus 239 ~~~~~~~~~~~fl~~ 253 (259)
+.+.+.+.+|+..
T Consensus 422 --~~al~m~~~fi~~ 434 (437)
T PLN02209 422 --EESSIMFQRWISG 434 (437)
T ss_pred --HHHHHHHHHHHcC
Confidence 7888888888853
No 254
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=56.91 E-value=56 Score=27.75 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=65.9
Q ss_pred eEEeCCC--CCCeeEEEEeccCCCCchh---HHHHHH----------HHHhcCCEEEeeccCCCCCCCCCCCCcchhhhh
Q 025027 47 AYVTGPP--HSKKAVLMISDIYGDEPPI---YRSVAD----------KVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWR 111 (259)
Q Consensus 47 ~~~~~~~--~~~~~vil~~~~~g~~~~~---~~~~a~----------~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~ 111 (259)
+|+..+. ..+|..+.+.|+.|....- +..+.+ .+.+ -..++.+|.+-|.+.+.-.....+.
T Consensus 20 ly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk-~adllfvDnPVGaGfSyVdg~~~Y~--- 95 (414)
T KOG1283|consen 20 LYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK-DADLLFVDNPVGAGFSYVDGSSAYT--- 95 (414)
T ss_pred EeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh-hccEEEecCCCcCceeeecCccccc---
Confidence 3444444 3446677777887754322 222211 1111 2557778876555443322111111
Q ss_pred hccCCCcccccHHHHHHHHHHc----CCCcEEEEeechhHHHHHHHhcC-----------cccceEEEecCCCCChh
Q 025027 112 KNHTTDKGYEDAKPVIAALKAK----GVSAVGAAGFCWGGKVAVKLASN-----------QDVQAAVLLHPSNVTED 173 (259)
Q Consensus 112 ~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~-----------~~i~~~i~~~~~~~~~~ 173 (259)
.+..+...|+..+++.+-.. ...++.|+--|+||-++..++.. -++.++++-.+++.+.+
T Consensus 96 --~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D 170 (414)
T KOG1283|consen 96 --TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPED 170 (414)
T ss_pred --ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhH
Confidence 11233445555555555433 34589999999999999988721 25677777777765533
No 255
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=56.58 E-value=20 Score=28.51 Aligned_cols=35 Identities=14% Similarity=0.325 Sum_probs=27.0
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeec
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d 91 (259)
..||++|.....+......+.+.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 35889997654444567778899999999998875
No 256
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=55.57 E-value=36 Score=26.22 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=28.0
Q ss_pred CCeeEEEEeccCCCCchh-HHHHHHHHHhcCCEEEeecc
Q 025027 55 SKKAVLMISDIYGDEPPI-YRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~-~~~~a~~la~~G~~v~~~d~ 92 (259)
.++.+|.+.|..|+.... -..+.+.|.++|+.++..|-
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 346788998888865432 23466788888999999984
No 257
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=52.53 E-value=41 Score=30.10 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=24.5
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILS 206 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~ 206 (259)
.++||+..|+.|.++|.-..+++.+.++
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~ 391 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQ 391 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCC
Confidence 4799999999999999888888887774
No 258
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=50.26 E-value=21 Score=29.96 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=29.3
Q ss_pred CCeeeEEeCCCCCCeeEEEEeccCCCCchhHHH-HHHHHHhcCCE
Q 025027 43 GGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRS-VADKVAGAGFL 86 (259)
Q Consensus 43 ~~~~~~~~~~~~~~~~vil~~~~~g~~~~~~~~-~a~~la~~G~~ 86 (259)
..++.|+..+...+|.++=+||+.|...++... +|+.+-+.|-.
T Consensus 96 ~alk~~~~n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl~ 140 (344)
T KOG2170|consen 96 NALKSHWANPNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGLR 140 (344)
T ss_pred HHHHHHhcCCCCCCCeEEEecCCCCCchhHHHHHHHHHHHhcccc
Confidence 447778777766667788888888866544333 56666666643
No 259
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=49.34 E-value=18 Score=30.47 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHHh
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
++.+.+++.+..+-.++|||+|=..++.++
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHC
Confidence 345556666777889999999999999876
No 260
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=48.99 E-value=1.3e+02 Score=30.82 Aligned_cols=97 Identities=19% Similarity=0.181 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHH------------hc-C-------cccceEEEecCCCCChhhhhccCCc---
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKL------------AS-N-------QDVQAAVLLHPSNVTEDEIKAVKVP--- 181 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~------------a~-~-------~~i~~~i~~~~~~~~~~~~~~~~~P--- 181 (259)
++++.|...+..+=+|+|||.|-.-+-.+ |. . ..+++.++--| ..-+..+. ++|
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~kGaMAAVG--LsWEq~~~-~~P~~~ 647 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLPKGAMAAVG--LSWEQCKS-RCPPDV 647 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCCCcchhhhc--CCHHHHhc-cCCCcc
Confidence 45555666677778999999985543322 10 0 11222222111 11112211 222
Q ss_pred EEEeecCCCCCC---ChHHHHHHHHHHhcCCCCCceEEecCCCCccccc
Q 025027 182 IAVLGAERDNGL---PPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTV 227 (259)
Q Consensus 182 vl~i~g~~D~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 227 (259)
+=.+|..+|.+. |.+....+.+.++.+ .+-.+.....|-.|..
T Consensus 648 ~paCHNs~D~~TiSGp~a~v~~~v~qL~~~---gvFak~V~t~G~aFHS 693 (2376)
T KOG1202|consen 648 VPACHNSKDNVTISGPQASVFAFVEQLRAE---GVFAKEVRTGGYAFHS 693 (2376)
T ss_pred cccccCCCCceEecCChHHHHHHHHHhhhc---CeeeeEecCCCccccC
Confidence 345777788653 678888999988533 3344455555666643
No 261
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=48.53 E-value=45 Score=25.01 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=25.1
Q ss_pred HHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 73 YRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 73 ~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
...+.+..++. ++..++|.|.+|.+ .-+++++||+...
T Consensus 77 t~aw~~ki~~aD~ivFvtPqYN~gyp-----------------------A~LKNAlD~lyhe 115 (199)
T KOG4530|consen 77 TEAWRQKILEADSIVFVTPQYNFGYP-----------------------APLKNALDWLYHE 115 (199)
T ss_pred HHHHHHHHhhcceEEEecccccCCCc-----------------------hHHHHHHHHhhhh
Confidence 34455555544 68888888854544 4577899999765
No 262
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=47.89 E-value=26 Score=28.95 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=22.6
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHh
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+.+.+.+.+.++-.++|||+|-..++.++
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHh
Confidence 44555555667789999999999998876
No 263
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=47.00 E-value=39 Score=26.94 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=23.9
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
+..|++.+.-.... -..++++|+++||.|++-.-
T Consensus 7 ~k~VlItgcs~GGI--G~ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 7 PKKVLITGCSSGGI--GYALAKEFARNGYLVYATAR 40 (289)
T ss_pred CCeEEEeecCCcch--hHHHHHHHHhCCeEEEEEcc
Confidence 44566655444332 36899999999999998754
No 264
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=46.95 E-value=28 Score=28.82 Aligned_cols=29 Identities=28% Similarity=0.188 Sum_probs=22.5
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHh
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
..+.+++.+.++-.++|||+|=..+..++
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 34445555667889999999999998876
No 265
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=46.37 E-value=35 Score=23.58 Aligned_cols=31 Identities=32% Similarity=0.449 Sum_probs=25.1
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhc-CCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~ 92 (259)
+|++.|..|... ..+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 577888888754 5788899987 999998887
No 266
>PRK02399 hypothetical protein; Provisional
Probab=45.90 E-value=1.9e+02 Score=25.50 Aligned_cols=96 Identities=18% Similarity=0.131 Sum_probs=52.6
Q ss_pred EEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCC-CC--------cchhhhhhccCCCc----ccccHHH
Q 025027 60 LMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSN-PK--------YDKDTWRKNHTTDK----GYEDAKP 125 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~-~~--------~~~~~~~~~~~~~~----~~~d~~~ 125 (259)
|++-+-+..+...+..+.+.+.++|..|+.+|.- .+.+..+.+ .. ..........+..+ ..+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 5566666666677888888899999999999982 121211100 00 11111111111111 1112223
Q ss_pred HHHHHHHc-CCCcEEEEeechhHHHHHHHhc
Q 025027 126 VIAALKAK-GVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 126 ~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
++..|.+. ..+-|+-+|-|.|..++..+++
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr 116 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMR 116 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHH
Confidence 33333333 3567888899999999988774
No 267
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=45.53 E-value=98 Score=21.23 Aligned_cols=26 Identities=8% Similarity=0.162 Sum_probs=16.3
Q ss_pred EEEE-eccCCCCchhHHHHHHHHHhcC
Q 025027 59 VLMI-SDIYGDEPPIYRSVADKVAGAG 84 (259)
Q Consensus 59 vil~-~~~~g~~~~~~~~~a~~la~~G 84 (259)
+|++ ||........|..++..+.+++
T Consensus 3 illvgHGSr~~~~~~~~~l~~~l~~~~ 29 (103)
T cd03413 3 VVFMGHGTDHPSNAVYAALEYVLREED 29 (103)
T ss_pred EEEEECCCCchhhhHHHHHHHHHHhcC
Confidence 4555 4444433467788888887764
No 268
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=43.66 E-value=47 Score=21.57 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=25.4
Q ss_pred ccHHHHHHHHHHc----CCCcEEEEeechhHHHHHHHh
Q 025027 121 EDAKPVIAALKAK----GVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 121 ~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+.+.+-|++++++ +++++-++|-|-|=.++.+++
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa 58 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIA 58 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHH
Confidence 4577778888874 567999999999988887755
No 269
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=43.47 E-value=75 Score=26.66 Aligned_cols=83 Identities=11% Similarity=0.064 Sum_probs=44.7
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC---CCCCCCCCCCCcc----hhh-hh------hccCCCcccccH
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF---HGDAANPSNPKYD----KDT-WR------KNHTTDKGYEDA 123 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~---~g~~~~~~~~~~~----~~~-~~------~~~~~~~~~~d~ 123 (259)
.||++.|-.+... ..++-.||+++-.++..|.+ .|-......+... +.. +. ..++.....+++
T Consensus 5 ~ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 4778878777653 56788888886689999974 2332221111100 000 00 111123334567
Q ss_pred HHHHHHHHHcCCCcEEEEee
Q 025027 124 KPVIAALKAKGVSAVGAAGF 143 (259)
Q Consensus 124 ~~~i~~l~~~~~~~i~l~G~ 143 (259)
..+|+.+.+.+.-+|.+.|-
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 77777776665555655553
No 270
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=43.30 E-value=56 Score=29.20 Aligned_cols=64 Identities=13% Similarity=0.046 Sum_probs=43.7
Q ss_pred CcEEEeecCCCCCCChHHHHHHHHHHhcCCCC--------------------CceEEecCCCCccccccCCCCChhhhhH
Q 025027 180 VPIAVLGAERDNGLPPAQMKRFDEILSAKPKF--------------------DHLVKTYPGVCHGWTVRYFVNDTFAVNS 239 (259)
Q Consensus 180 ~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 239 (259)
.|+|+..|+.|.++|.-..+...+.+...... ...+..+.|+||.. +...
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~V--P~~~-------- 433 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMV--PYDK-------- 433 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccC--CCCC--------
Confidence 69999999999999988888877776311100 12345666889943 3333
Q ss_pred HHHHHHHHHHHHHH
Q 025027 240 AAEAHEDMINWFEK 253 (259)
Q Consensus 240 ~~~~~~~~~~fl~~ 253 (259)
.+.+...+..|+..
T Consensus 434 p~~al~m~~~fl~g 447 (454)
T KOG1282|consen 434 PESALIMFQRFLNG 447 (454)
T ss_pred cHHHHHHHHHHHcC
Confidence 26677888888875
No 271
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=43.20 E-value=31 Score=26.43 Aligned_cols=34 Identities=9% Similarity=0.216 Sum_probs=24.0
Q ss_pred eEEEEeccCC--CCchhHHHHHHHHHhcCCEEEeec
Q 025027 58 AVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 58 ~vil~~~~~g--~~~~~~~~~a~~la~~G~~v~~~d 91 (259)
.||++|.+.. ........+.+.|.++||.++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5899995322 223455668888999999998874
No 272
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=42.13 E-value=51 Score=28.75 Aligned_cols=36 Identities=17% Similarity=-0.031 Sum_probs=25.4
Q ss_pred CeeEEEEe---ccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 56 KKAVLMIS---DIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 56 ~~~vil~~---~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
++-||.+. ||-|.+ .....+|..|+.+|+.|+++|.
T Consensus 105 ~~~vIav~n~KGGVGKT-Tta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 105 NPVVLAVMSHKGGVYKT-SSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred CceEEEEecCCCCCcHH-HHHHHHHHHHHhCCCcEEEEeC
Confidence 34466555 333333 3557789999999999999995
No 273
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=42.12 E-value=28 Score=24.59 Aligned_cols=21 Identities=38% Similarity=0.623 Sum_probs=19.5
Q ss_pred hHHHHHHHHHhcCCEEEeecc
Q 025027 72 IYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+..+|++|+++||.|++.|-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEec
Confidence 568899999999999999998
No 274
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=41.71 E-value=1e+02 Score=20.44 Aligned_cols=20 Identities=25% Similarity=0.315 Sum_probs=13.8
Q ss_pred cHHHHHHHHHHcCCCcEEEE
Q 025027 122 DAKPVIAALKAKGVSAVGAA 141 (259)
Q Consensus 122 d~~~~i~~l~~~~~~~i~l~ 141 (259)
++..+++.+...+.++|.++
T Consensus 46 ~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 46 DTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred CHHHHHHHHHHcCCCeEEEE
Confidence 56677888877666666655
No 275
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=40.73 E-value=1.2e+02 Score=24.51 Aligned_cols=58 Identities=22% Similarity=0.398 Sum_probs=36.5
Q ss_pred hHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccC-----------CCcccccHHHHHHHHHH
Q 025027 72 IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT-----------TDKGYEDAKPVIAALKA 132 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~d~~~~i~~l~~ 132 (259)
.+...++.|.+.|..|.++|. -|.+..+++.= . ..|++.+. .....+.-.++|+.+++
T Consensus 58 Ef~amve~L~~~GvdV~ifdd-tg~~~TPDsvF-P-NNWFSTh~~g~v~LyPM~~~nRRlER~~~lid~lk~ 126 (318)
T COG4874 58 EFNAMVEGLRQAGVDVVIFDD-TGQGETPDSVF-P-NNWFSTHEAGEVFLYPMACANRRLERPEALIDTLKQ 126 (318)
T ss_pred HHHHHHHHHHhcCceEEEeec-CCCCCCCcccC-C-CcccccCcCCeEEEeeccCccccccchHHHHHHHHh
Confidence 345567889999999999999 56655444321 1 23555432 24455667777877764
No 276
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=40.26 E-value=26 Score=30.70 Aligned_cols=67 Identities=13% Similarity=0.185 Sum_probs=36.9
Q ss_pred cCCcEEEeecCCCCCCChHHHHHHH-HHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 025027 178 VKVPIAVLGAERDNGLPPAQMKRFD-EILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 254 (259)
Q Consensus 178 ~~~Pvl~i~g~~D~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 254 (259)
-..|++++.|.-|.+- ++.-.++ +.+ ...|...-....||.|+.......+ ..+..++.+++||...
T Consensus 188 ~p~P~VIv~gGlDs~q--eD~~~l~~~~l-~~rGiA~LtvDmPG~G~s~~~~l~~-------D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQ--EDLYRLFRDYL-APRGIAMLTVDMPGQGESPKWPLTQ-------DSSRLHQAVLDYLASR 255 (411)
T ss_dssp S-EEEEEEE--TTS-G--GGGHHHHHCCC-HHCT-EEEEE--TTSGGGTTT-S-S--------CCHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCcchhH--HHHHHHHHHHH-HhCCCEEEEEccCCCcccccCCCCc-------CHHHHHHHHHHHHhcC
Confidence 3569999999999973 3433333 333 2346566667788888753222222 2367889999999763
No 277
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=39.74 E-value=46 Score=25.18 Aligned_cols=22 Identities=27% Similarity=0.289 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..+|..|+++|+.|+.+|.
T Consensus 14 t~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 14 TIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEE
T ss_pred HHHHHHHhcccccccccccccc
Confidence 3446689999999999999998
No 278
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=38.96 E-value=88 Score=23.41 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=25.2
Q ss_pred eeEEEEeccCCCCch-hHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMISDIYGDEPP-IYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~~~~g~~~~-~~~~~a~~la~~G~~v~~~d~ 92 (259)
+.+|++.|..|.... .-..+.+.|.+.|+.|+.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 568899998887643 223466677788999999985
No 279
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=38.10 E-value=44 Score=27.40 Aligned_cols=28 Identities=32% Similarity=0.290 Sum_probs=21.4
Q ss_pred HHHHHHcC-CCcEEEEeechhHHHHHHHh
Q 025027 127 IAALKAKG-VSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 127 i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a 154 (259)
.+.+.+.+ ..+-.++|||+|=..+..++
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHh
Confidence 33444445 67889999999999988876
No 280
>PF15240 Pro-rich: Proline-rich
Probab=37.39 E-value=18 Score=27.62 Aligned_cols=18 Identities=39% Similarity=0.604 Sum_probs=13.4
Q ss_pred hhHHHHHHhhhccccccC
Q 025027 2 MELILLTSLLLNFASSKA 19 (259)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (259)
|+++||++.|+++-+|..
T Consensus 1 MLlVLLSvALLALSSAQ~ 18 (179)
T PF15240_consen 1 MLLVLLSVALLALSSAQS 18 (179)
T ss_pred ChhHHHHHHHHHhhhccc
Confidence 788888887777766633
No 281
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=37.22 E-value=2.4e+02 Score=26.18 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=27.5
Q ss_pred ccHHHHHHHHHHcCCCcEEEEee------chhHHHHHH-HhcCcccceEEEecC
Q 025027 121 EDAKPVIAALKAKGVSAVGAAGF------CWGGKVAVK-LASNQDVQAAVLLHP 167 (259)
Q Consensus 121 ~d~~~~i~~l~~~~~~~i~l~G~------S~Gg~~a~~-~a~~~~i~~~i~~~~ 167 (259)
..+..++..+-.. .++++++|| |.|+.+++. +|....-.+.+.+.|
T Consensus 324 Rvis~al~d~i~e-~d~VfImGHk~pDmDalGsAig~~~~A~~~~~~a~~v~dp 376 (655)
T COG3887 324 RVISTALSDIIKE-SDNVFIMGHKFPDMDALGSAIGMQKFASMNNKEAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHhh-cCcEEEEccCCCChHHHHHHHHHHHHHHhcccccEEEECc
Confidence 3444455444333 568999999 789999988 453222244444443
No 282
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=36.94 E-value=40 Score=29.25 Aligned_cols=64 Identities=11% Similarity=0.027 Sum_probs=40.4
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcC------------CC---------CCceEEecCCCCccccccCCCCChhhh
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAK------------PK---------FDHLVKTYPGVCHGWTVRYFVNDTFAV 237 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~------------~~---------~~~~~~~~~g~~H~~~~~~~~~~~~~~ 237 (259)
..+||+.+|..|.++|.-..+.+.+.+.-. .+ ...++..+.+|||....
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~---------- 399 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ---------- 399 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH----------
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh----------
Confidence 489999999999999999999998887311 00 13456777788996532
Q ss_pred hHHHHHHHHHHHHHH
Q 025027 238 NSAAEAHEDMINWFE 252 (259)
Q Consensus 238 ~~~~~~~~~~~~fl~ 252 (259)
+..+.+.+.+.+|++
T Consensus 400 dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 400 DQPEAALQMFRRFLK 414 (415)
T ss_dssp HSHHHHHHHHHHHHC
T ss_pred hCHHHHHHHHHHHhc
Confidence 223667777777763
No 283
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=35.62 E-value=1.3e+02 Score=25.40 Aligned_cols=83 Identities=17% Similarity=0.175 Sum_probs=44.6
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccC---CCCCCCCCCCC----c-------chhhhhhccCCCcccc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF---HGDAANPSNPK----Y-------DKDTWRKNHTTDKGYE 121 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~---~g~~~~~~~~~----~-------~~~~~~~~~~~~~~~~ 121 (259)
+.++++.|-.+... ..++-.||++ |-.|+..|.. .|-......+. . ++-...+.++..+..+
T Consensus 3 ~~~i~I~GPTAsGK---T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGK---TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCH---HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 45677766666543 5778888877 7889999964 23221111110 0 0011111222344456
Q ss_pred cHHHHHHHHHHcCCCcEEEEe
Q 025027 122 DAKPVIAALKAKGVSAVGAAG 142 (259)
Q Consensus 122 d~~~~i~~l~~~~~~~i~l~G 142 (259)
++...++.+.+++.-+|.+.|
T Consensus 80 ~a~~~i~~i~~rgk~pIlVGG 100 (308)
T COG0324 80 DALAAIDDILARGKLPILVGG 100 (308)
T ss_pred HHHHHHHHHHhCCCCcEEEcc
Confidence 777788888776544555543
No 284
>PLN02748 tRNA dimethylallyltransferase
Probab=35.21 E-value=99 Score=27.79 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=46.7
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccC---CCCCCCCCCCC----cchhh-------hhhccCCCccc
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF---HGDAANPSNPK----YDKDT-------WRKNHTTDKGY 120 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~---~g~~~~~~~~~----~~~~~-------~~~~~~~~~~~ 120 (259)
.+.+|++.|..|... ..++..||++ +..++..|.+ .|-......+. ..+.. ....++.....
T Consensus 21 ~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~ 97 (468)
T PLN02748 21 KAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFR 97 (468)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHH
Confidence 345788888777653 5677788877 7788888843 33222111110 00000 00112223444
Q ss_pred ccHHHHHHHHHHcCCCcEEEEee
Q 025027 121 EDAKPVIAALKAKGVSAVGAAGF 143 (259)
Q Consensus 121 ~d~~~~i~~l~~~~~~~i~l~G~ 143 (259)
.++..+|+.+.+.+.-+|.+.|-
T Consensus 98 ~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 98 DHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHhcCCCeEEEcCh
Confidence 66777888887766556666553
No 285
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=35.19 E-value=78 Score=27.81 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=24.8
Q ss_pred eEEEEe---ccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 58 AVLMIS---DIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 58 ~vil~~---~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+|.+. ||-|.+ .....+|..|+.+|+.|+++|.
T Consensus 122 ~vIav~n~KGGvGKT-Tta~nLA~~LA~~G~rVLlIDl 158 (405)
T PRK13869 122 QVIAVTNFKGGSGKT-TTSAHLAQYLALQGYRVLAVDL 158 (405)
T ss_pred eEEEEEcCCCCCCHH-HHHHHHHHHHHhcCCceEEEcC
Confidence 456555 333333 4557789999999999999998
No 286
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=34.81 E-value=1.1e+02 Score=25.47 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=43.8
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCC-------EEEeeccCCCC-CCCCCCCCcchhhhhhccCCCcccccHHHHHHHH
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGF-------LVVAPDFFHGD-AANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAAL 130 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~-------~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l 130 (259)
-|++.|........-..+...+.++|. .++.+|. .|- .............+.+... +....++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~-~Gll~~~r~~l~~~~~~~a~~~~-~~~~~~L~e~i~~v 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDS-KGLLTKDRKDLTPFKKPFARKDE-EKEGKSLLEVVKAV 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcC-CCeEeCCCCcchHHHHHHHhhcC-cccCCCHHHHHHhc
Confidence 345555444333344556666666788 8999998 442 1111111111112222211 11234566666655
Q ss_pred HHcCCCcEEEEeec-hhHHHHHHH
Q 025027 131 KAKGVSAVGAAGFC-WGGKVAVKL 153 (259)
Q Consensus 131 ~~~~~~~i~l~G~S-~Gg~~a~~~ 153 (259)
+ +-+|+|-| .||.+.-.+
T Consensus 105 ~-----ptvlIG~S~~~g~ft~ev 123 (279)
T cd05312 105 K-----PTVLIGLSGVGGAFTEEV 123 (279)
T ss_pred C-----CCEEEEeCCCCCCCCHHH
Confidence 3 45999999 467554443
No 287
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=34.34 E-value=78 Score=20.29 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=21.1
Q ss_pred EEeccCCCC-chhHHHHHHHHHhcCCEEEeec
Q 025027 61 MISDIYGDE-PPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 61 l~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d 91 (259)
++.+..|.. ......++..|++.|+.|+..|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344333432 3455678899999999999887
No 288
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=33.75 E-value=1.2e+02 Score=28.64 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=25.7
Q ss_pred eeEEEEeccCCC---------CchhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMISDIYGD---------EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~~~~g~---------~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+||+.|+.... ..+.+....+.|.++||.++.++-
T Consensus 49 ~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~e 93 (672)
T PRK14581 49 FVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQ 93 (672)
T ss_pred eEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHH
Confidence 467777765322 123567788889999999999974
No 289
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=32.99 E-value=83 Score=26.39 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=24.6
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
-||++.|... .+..+.++-.|.++||.|++.-.
T Consensus 4 evVvI~Gs~~--~PltR~la~DLeRRGFIV~v~~~ 36 (299)
T PF08643_consen 4 EVVVIAGSPH--DPLTRSLALDLERRGFIVYVTVS 36 (299)
T ss_pred eEEEEECCCC--CccHHHHHHHHhhCCeEEEEEeC
Confidence 3566655433 45678999999999999998743
No 290
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=31.85 E-value=1.6e+02 Score=24.76 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=25.2
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccC
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF 93 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~ 93 (259)
+.+|++.|..|... ..++..|+++ +..++..|..
T Consensus 4 ~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds~ 38 (307)
T PRK00091 4 PKVIVIVGPTASGK---TALAIELAKRLNGEIISADSM 38 (307)
T ss_pred ceEEEEECCCCcCH---HHHHHHHHHhCCCcEEecccc
Confidence 45788888777653 5788888877 7778888863
No 291
>PLN02572 UDP-sulfoquinovose synthase
Probab=31.84 E-value=1.2e+02 Score=26.99 Aligned_cols=31 Identities=19% Similarity=0.071 Sum_probs=24.8
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
-|++.|+.|.- -..++++|+++|+.|+++|.
T Consensus 49 ~VLVTGatGfI---Gs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 49 KVMVIGGDGYC---GWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred EEEEECCCcHH---HHHHHHHHHHCCCeEEEEec
Confidence 46777777763 26899999999999999884
No 292
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=31.79 E-value=1.6e+02 Score=24.20 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=34.3
Q ss_pred CCeeEEEEeccCCCC-chhHHHHHHHHHhcCCE-EEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 55 SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFL-VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 55 ~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
.+.++|++.||.... ...|..+...|.+.|+. |++--. .|. -++..+++.|+.
T Consensus 140 ~~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtv-EG~------------------------P~~~~vi~~L~~ 194 (262)
T PF06180_consen 140 KDEAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTV-EGY------------------------PSLEDVIARLKK 194 (262)
T ss_dssp TTEEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEET-TSS------------------------SBHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEe-CCC------------------------CCHHHHHHHHHh
Confidence 345666666665533 34677788888888733 443332 222 246778888887
Q ss_pred cCCCcEEEE
Q 025027 133 KGVSAVGAA 141 (259)
Q Consensus 133 ~~~~~i~l~ 141 (259)
.+.+++.|+
T Consensus 195 ~g~k~V~L~ 203 (262)
T PF06180_consen 195 KGIKKVHLI 203 (262)
T ss_dssp HT-SEEEEE
T ss_pred cCCCeEEEE
Confidence 665555544
No 293
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=31.69 E-value=91 Score=29.44 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=26.1
Q ss_pred CeeEEEEeccCCC---------CchhHHHHHHHHHhcCCEEEeecc
Q 025027 56 KKAVLMISDIYGD---------EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 56 ~~~vil~~~~~g~---------~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.-+||+.|+.... ....+....+.|.++||.++.++-
T Consensus 48 ~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~e 93 (671)
T PRK14582 48 GFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQ 93 (671)
T ss_pred ceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHH
Confidence 3567777765321 123567788889999999999984
No 294
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=31.44 E-value=12 Score=14.10 Aligned_cols=6 Identities=67% Similarity=1.453 Sum_probs=2.9
Q ss_pred eechhH
Q 025027 142 GFCWGG 147 (259)
Q Consensus 142 G~S~Gg 147 (259)
||++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 445544
No 295
>PLN02840 tRNA dimethylallyltransferase
Probab=31.41 E-value=1.2e+02 Score=26.78 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=44.2
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccC---CCCCCCCCCCC----cchhh-h------hhccCCCcccc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF---HGDAANPSNPK----YDKDT-W------RKNHTTDKGYE 121 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~---~g~~~~~~~~~----~~~~~-~------~~~~~~~~~~~ 121 (259)
..+|++.|..|... ..++..|+++ +..++..|.. .+.......+. ..+.. + ...++.....+
T Consensus 21 ~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~~ 97 (421)
T PLN02840 21 EKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFFD 97 (421)
T ss_pred CeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHHH
Confidence 45788888777653 5677777777 5667888753 22211111110 00000 0 01111233446
Q ss_pred cHHHHHHHHHHcCCCcEEEEee
Q 025027 122 DAKPVIAALKAKGVSAVGAAGF 143 (259)
Q Consensus 122 d~~~~i~~l~~~~~~~i~l~G~ 143 (259)
++..+|+.+.+.+.-+|++.|-
T Consensus 98 ~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 98 DARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHhcCCCEEEEcCc
Confidence 6778888887766556666554
No 296
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=31.26 E-value=84 Score=24.36 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=24.4
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEee
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAP 90 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~ 90 (259)
..++||++.||+|+.. ..++..++++ ||.-+..
T Consensus 6 ~~~~IifVlGGPGsgK---gTqC~kiv~ky~ftHlSa 39 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSGK---GTQCEKIVEKYGFTHLSA 39 (195)
T ss_pred cCCCEEEEEcCCCCCc---chHHHHHHHHcCceeecH
Confidence 3578999999999875 4677777777 6665554
No 297
>COG0400 Predicted esterase [General function prediction only]
Probab=31.21 E-value=2e+02 Score=22.63 Aligned_cols=44 Identities=11% Similarity=0.074 Sum_probs=31.3
Q ss_pred CCeeEEEEeccCCC--CchhHHHHHHHHHhcCCEEEeeccCCCCCC
Q 025027 55 SKKAVLMISDIYGD--EPPIYRSVADKVAGAGFLVVAPDFFHGDAA 98 (259)
Q Consensus 55 ~~~~vil~~~~~g~--~~~~~~~~a~~la~~G~~v~~~d~~~g~~~ 98 (259)
..++|++.||-... .......+.+.|.+.|..|-.-++..|+..
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i 190 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEI 190 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcC
Confidence 34678888877664 334456678888899999988887556643
No 298
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=31.15 E-value=80 Score=23.69 Aligned_cols=30 Identities=40% Similarity=0.317 Sum_probs=23.7
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
+++.|..++...-.+.|-|.|+.++..++.
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 556665555557799999999999999884
No 299
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=30.75 E-value=98 Score=27.07 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=49.1
Q ss_pred eEEEEe---ccCCCCchhHHHHHHHHHhc-CCEEEeeccC-----------CCCCCCCCCCCcchhhhhhccCCCccccc
Q 025027 58 AVLMIS---DIYGDEPPIYRSVADKVAGA-GFLVVAPDFF-----------HGDAANPSNPKYDKDTWRKNHTTDKGYED 122 (259)
Q Consensus 58 ~vil~~---~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 122 (259)
-||.+- ||.+.....-..+.+.|.++ ||.++++..- .|.+..+...-..+..|+.+ .++
T Consensus 46 RiV~LGE~sHGt~e~~~~k~rm~r~Lvee~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~~~~~~~~~Wr------~~~ 119 (405)
T COG2312 46 RIVLLGEPSHGTGEFFAFKARMFRALVEELGFRAIAFEADFPDAQAVNRYVRGGGDDLREAMDGFIFWVWR------RAE 119 (405)
T ss_pred eEEEecCCCCCccHHHHHHHHHHHHHHHHhCcceEEeccCcHHHHHHHHHHhccCCChHHHHhccchhhhh------HHH
Confidence 356665 33333222224466777766 9999998641 12222222111122223222 358
Q ss_pred HHHHHHHHHHcC-----CCcEEEEeec---hhHHHHHHHh
Q 025027 123 AKPVIAALKAKG-----VSAVGAAGFC---WGGKVAVKLA 154 (259)
Q Consensus 123 ~~~~i~~l~~~~-----~~~i~l~G~S---~Gg~~a~~~a 154 (259)
+.++++|++..+ ..++.+.|+. .+|.++...+
T Consensus 120 v~~lv~wlr~~na~r~~~~~~~f~g~D~~~~n~~~~~~~~ 159 (405)
T COG2312 120 VRDLVEWLREFNAARSAGPQVGFYGFDAQMENGSAAALRA 159 (405)
T ss_pred HHHHHHHHHHHhccCCcccccceeeccccccccchHHHHh
Confidence 899999998752 3578888875 4555544443
No 300
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=30.56 E-value=2.2e+02 Score=20.97 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=52.4
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcC
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKG 134 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 134 (259)
.+|-|++.--|...+...-.-+++.|++.||.|+..-.+ . --.++++...+++
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~----~-----------------------tp~e~v~aA~~~d 63 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLF----Q-----------------------TPEEAVRAAVEED 63 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCCc----C-----------------------CHHHHHHHHHhcC
Confidence 345455555444444344567899999999999986442 1 1123444444556
Q ss_pred CCcEEEEeechhHHHHHHHh----cCcccceEEEecCCCCChhh
Q 025027 135 VSAVGAAGFCWGGKVAVKLA----SNQDVQAAVLLHPSNVTEDE 174 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a----~~~~i~~~i~~~~~~~~~~~ 174 (259)
.+-|++.+.+.|...-..-. +......+..+.|...++++
T Consensus 64 v~vIgvSsl~g~h~~l~~~lve~lre~G~~~i~v~~GGvip~~d 107 (143)
T COG2185 64 VDVIGVSSLDGGHLTLVPGLVEALREAGVEDILVVVGGVIPPGD 107 (143)
T ss_pred CCEEEEEeccchHHHHHHHHHHHHHHhCCcceEEeecCccCchh
Confidence 67788888777766555433 22234444444444444433
No 301
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=30.40 E-value=90 Score=27.23 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=25.4
Q ss_pred CeeEEEEeccCCC--CchhHHHHHHHHHhcCCEEEeecc
Q 025027 56 KKAVLMISDIYGD--EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 56 ~~~vil~~~~~g~--~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+.||.+...-|. +......+|..|+.+|+.|+++|.
T Consensus 105 ~~~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~ 143 (388)
T PRK13705 105 FPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEG 143 (388)
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcC
Confidence 3456666633332 223457789999999999999995
No 302
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=30.20 E-value=82 Score=24.02 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=23.1
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
-+++.|...+...=.+.|-|.||.++..++.
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHc
Confidence 3555555554445689999999999999884
No 303
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=30.04 E-value=91 Score=26.74 Aligned_cols=37 Identities=16% Similarity=0.050 Sum_probs=29.2
Q ss_pred eeEEEE-eccCCCCchhHHHHHHHHHhcCCEEEeeccC
Q 025027 57 KAVLMI-SDIYGDEPPIYRSVADKVAGAGFLVVAPDFF 93 (259)
Q Consensus 57 ~~vil~-~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~ 93 (259)
+.++++ +..|+..+..-..++.+|+++|+.|+.++..
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~ 42 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPP 42 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCC
Confidence 456666 4577766667789999999889999999874
No 304
>COG3233 Predicted deacetylase [General function prediction only]
Probab=29.73 E-value=2.9e+02 Score=22.08 Aligned_cols=69 Identities=9% Similarity=0.112 Sum_probs=40.2
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhc---CCE--EEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGA---GFL--VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~---G~~--v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
+.+|++|...+..++.+..+.+.+.+- +-. .++||+.++.+.. .=..+++++.
T Consensus 4 ~~iillhdVSpv~~~~~~~i~~~ide~~~~~~t~lLViPn~~~~~~l~----------------------~d~rf~~~l~ 61 (233)
T COG3233 4 PLIILLHDVSPVYWPTLSNIDAAIDEYGAQNSTVLLVIPNHANDYPLS----------------------KDPRFVDLLT 61 (233)
T ss_pred cceEEEEecCcccchhHHHHHHHHHHhCCCCceEEEEeeccCCCCCcc----------------------cChHHHHHHH
Confidence 368999988887777666655544444 433 4667774333221 1123455554
Q ss_pred Hc--CCCcEEEEeechhH
Q 025027 132 AK--GVSAVGAAGFCWGG 147 (259)
Q Consensus 132 ~~--~~~~i~l~G~S~Gg 147 (259)
++ ..+.++|-|+-.=+
T Consensus 62 ~r~e~Gdel~lHGy~h~d 79 (233)
T COG3233 62 EREEEGDELVLHGYDHID 79 (233)
T ss_pred HHHhcCCEEEEechhhcc
Confidence 43 34688888887544
No 305
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=29.69 E-value=81 Score=27.20 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=25.3
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
|+++|..+.. .+..+++.|+++|+.|.++-.
T Consensus 2 il~~~~~~p~---~~~~la~~L~~~G~~v~~~~~ 32 (396)
T cd03818 2 ILFVHQNFPG---QFRHLAPALAAQGHEVVFLTE 32 (396)
T ss_pred EEEECCCCch---hHHHHHHHHHHCCCEEEEEec
Confidence 6788877664 468899999999999988765
No 306
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=29.36 E-value=53 Score=23.30 Aligned_cols=33 Identities=12% Similarity=0.007 Sum_probs=22.0
Q ss_pred EEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 60 LMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
++...+.+.+-.-+..+++.|.++|+.|...-.
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~ 34 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATP 34 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEET
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeec
Confidence 444444444445678899999999999875543
No 307
>COG3911 Predicted ATPase [General function prediction only]
Probab=29.28 E-value=1e+02 Score=23.20 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=24.4
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeec
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d 91 (259)
-++++.|+.|... ..+...|++.||.++---
T Consensus 10 ~~fIltGgpGaGK---TtLL~aLa~~Gfatvee~ 40 (183)
T COG3911 10 KRFILTGGPGAGK---TTLLAALARAGFATVEEA 40 (183)
T ss_pred eEEEEeCCCCCcH---HHHHHHHHHcCceeeccc
Confidence 4788889888764 577888999999987653
No 308
>PRK06703 flavodoxin; Provisional
Probab=28.88 E-value=1.8e+02 Score=21.14 Aligned_cols=35 Identities=11% Similarity=0.173 Sum_probs=22.4
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+|++....|.+...-..+++.+.+.|+.|-..+.
T Consensus 4 v~IiY~S~tGnT~~iA~~ia~~l~~~g~~v~~~~~ 38 (151)
T PRK06703 4 ILIAYASMSGNTEDIADLIKVSLDAFDHEVVLQEM 38 (151)
T ss_pred EEEEEECCCchHHHHHHHHHHHHHhcCCceEEEeh
Confidence 45555556666544445566777777888777765
No 309
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=28.83 E-value=1.6e+02 Score=25.05 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=27.3
Q ss_pred eeEEEEe----ccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMIS----DIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~----~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+||.+- ||.|.+ +....+++.|.++|+.+.++.-
T Consensus 35 vpVIsVGNltvGGTGKT-P~v~~L~~~L~~~G~~~~IlSR 73 (326)
T PF02606_consen 35 VPVISVGNLTVGGTGKT-PLVIWLARLLQARGYRPAILSR 73 (326)
T ss_pred CcEEEEcccccCCCCch-HHHHHHHHHHHhcCCceEEEcC
Confidence 4566655 666665 6889999999999999888874
No 310
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=28.63 E-value=92 Score=23.19 Aligned_cols=22 Identities=23% Similarity=0.157 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..+|..+++.|+.|+.+|.
T Consensus 15 t~a~~LA~~la~~g~~vllvD~ 36 (169)
T cd02037 15 TVAVNLALALAKLGYKVGLLDA 36 (169)
T ss_pred HHHHHHHHHHHHcCCcEEEEeC
Confidence 3456789999999999999997
No 311
>COG1647 Esterase/lipase [General function prediction only]
Probab=28.37 E-value=93 Score=24.96 Aligned_cols=63 Identities=16% Similarity=0.290 Sum_probs=38.5
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 252 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 252 (259)
+.-+|++||--- ++.+++.+.+.|+. .|-.+-.-.|| ||+...+.-. ....+++|+.+.+=.+
T Consensus 15 ~~AVLllHGFTG---t~~Dvr~Lgr~L~e-~GyTv~aP~yp--GHG~~~e~fl-----~t~~~DW~~~v~d~Y~ 77 (243)
T COG1647 15 NRAVLLLHGFTG---TPRDVRMLGRYLNE-NGYTVYAPRYP--GHGTLPEDFL-----KTTPRDWWEDVEDGYR 77 (243)
T ss_pred CEEEEEEeccCC---CcHHHHHHHHHHHH-CCceEecCCCC--CCCCCHHHHh-----cCCHHHHHHHHHHHHH
Confidence 456899999433 47899999999954 45555555777 5776432111 1234666666655443
No 312
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=28.29 E-value=91 Score=25.29 Aligned_cols=22 Identities=14% Similarity=0.052 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 15 T~a~nLA~~la~~G~rvlliD~ 36 (267)
T cd02032 15 TTSSNLSVALAKRGKKVLQIGC 36 (267)
T ss_pred HHHHHHHHHHHHCCCcEEEEec
Confidence 4457789999999999999998
No 313
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=28.07 E-value=1.5e+02 Score=24.73 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=22.7
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhc-CCEEEeeccC
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF 93 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~ 93 (259)
+|++.|..|... ..++..|+++ +..++..|..
T Consensus 1 vi~i~G~t~~GK---s~la~~l~~~~~~~iis~Ds~ 33 (287)
T TIGR00174 1 VIFIMGPTAVGK---SQLAIQLAKKLNAEIISVDSM 33 (287)
T ss_pred CEEEECCCCCCH---HHHHHHHHHhCCCcEEEechh
Confidence 356667677643 5778888876 7788888864
No 314
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=27.97 E-value=69 Score=25.47 Aligned_cols=37 Identities=27% Similarity=0.489 Sum_probs=27.9
Q ss_pred CeeEEEEeccCCC-CchhHHHHHHHHHhcCCEEEeecc
Q 025027 56 KKAVLMISDIYGD-EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 56 ~~~vil~~~~~g~-~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
++.|+++.+-+.. +...-..+.+.|.+.|+.|+..|+
T Consensus 183 ~~~Ivl~GrpY~~~D~~in~~I~~~l~~~G~~vit~d~ 220 (221)
T PF09989_consen 183 KPAIVLLGRPYNIYDPFINMGIPDKLRSLGVPVITEDM 220 (221)
T ss_pred CceEEEEcCCCcCCCcccCCchHHHHHHCCCeeeCccc
Confidence 4567777777765 322346689999999999999986
No 315
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=27.86 E-value=1.1e+02 Score=24.36 Aligned_cols=22 Identities=27% Similarity=0.188 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..+|..|+++|+.|+.+|.
T Consensus 16 t~a~~LA~~la~~g~~VlliD~ 37 (251)
T TIGR01969 16 TITANLGVALAKLGKKVLALDA 37 (251)
T ss_pred HHHHHHHHHHHHCCCeEEEEeC
Confidence 3456689999999999999997
No 316
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=27.74 E-value=95 Score=23.02 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..++..++++|+.|+.+|.
T Consensus 15 t~a~~la~~l~~~g~~vllvD~ 36 (179)
T cd02036 15 TTTANLGTALAQLGYKVVLIDA 36 (179)
T ss_pred HHHHHHHHHHHhCCCeEEEEeC
Confidence 4556789999999999999987
No 317
>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=27.73 E-value=1.5e+02 Score=26.14 Aligned_cols=161 Identities=10% Similarity=0.035 Sum_probs=80.5
Q ss_pred HHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcc---cccHHHHHHHHHHcCCCcEEEEeechhH--H
Q 025027 74 RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG---YEDAKPVIAALKAKGVSAVGAAGFCWGG--K 148 (259)
Q Consensus 74 ~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~i~~l~~~~~~~i~l~G~S~Gg--~ 148 (259)
..++..++++||.|.++|.-... ...++........ ...+.++++.|+ .+++|.||=-+- - -
T Consensus 16 ~NLaLNi~~~G~~VavyNRt~~k----------td~f~~~~~~~k~i~~~~sieefV~~Le--~PRkI~lMVkAG-~~VD 82 (473)
T COG0362 16 SNLALNIADHGYTVAVYNRTTEK----------TDEFLAERAKGKNIVPAYSIEEFVASLE--KPRKILLMVKAG-TPVD 82 (473)
T ss_pred HHHHHHHHhcCceEEEEeCCHHH----------HHHHHHhCccCCCccccCcHHHHHHHhc--CCceEEEEEecC-CcHH
Confidence 46888999999999999852110 1222222221111 145666666664 467888875442 1 0
Q ss_pred HHHHHhcCc-ccceEEEec-CCCCCh-----------------------hhhhccCCcEEEeecCCCCCCChHHHHHHHH
Q 025027 149 VAVKLASNQ-DVQAAVLLH-PSNVTE-----------------------DEIKAVKVPIAVLGAERDNGLPPAQMKRFDE 203 (259)
Q Consensus 149 ~a~~~a~~~-~i~~~i~~~-~~~~~~-----------------------~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~ 203 (259)
..+.- ..| --++=|.+. |...-. ........|.++--|..|- .+....+++
T Consensus 83 ~~I~~-L~p~Le~gDIiIDGGNs~y~DT~RR~~eL~~~Gi~FvG~GVSGGEeGA~~GPSiMpGG~~ea---y~~v~pil~ 158 (473)
T COG0362 83 AVIEQ-LLPLLEKGDIIIDGGNSHYKDTIRRNKELSEKGILFVGMGVSGGEEGARHGPSIMPGGQKEA---YELVAPILT 158 (473)
T ss_pred HHHHH-HHhhcCCCCEEEeCCCcCCchHHHHHHHHHhcCCeEEeccccccccccccCCCcCCCCCHHH---HHHHHHHHH
Confidence 11111 111 112222222 222111 1112234577777776665 567777777
Q ss_pred HHhcC-CCCCce-EEecCCCCccccc-cCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 025027 204 ILSAK-PKFDHL-VKTYPGVCHGWTV-RYFVNDTFAVNSAAEAHEDMINWFEKHVK 256 (259)
Q Consensus 204 ~l~~~-~~~~~~-~~~~~g~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 256 (259)
.+..+ .+.++. +.--.|+||..-. ..+-. -..-+...++-.+|++.++
T Consensus 159 ~IaAk~~g~pCc~~iG~~GAGHfVKmVHNGIE-----YgDMQlIaE~Y~ilk~~lg 209 (473)
T COG0362 159 KIAAKVDGEPCCTWIGPDGAGHFVKMVHNGIE-----YGDMQLIAEAYDILKDGLG 209 (473)
T ss_pred HHHhhcCCCCceeeECCCCCCceeeeeecCch-----HHHHHHHHHHHHHHHHhcC
Confidence 77543 244443 3344568996632 21111 1235666777777776553
No 318
>cd01477 vWA_F09G8-8_type VWA F09G8.8 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of mo
Probab=27.64 E-value=1.7e+02 Score=22.65 Aligned_cols=37 Identities=22% Similarity=0.445 Sum_probs=25.5
Q ss_pred CeeEEEEeccCC-CCchhHHHHHHHHHhcCCEEEeecc
Q 025027 56 KKAVLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 56 ~~~vil~~~~~g-~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
++.+|++..+.+ .........++.|.+.|..++++-.
T Consensus 132 ~kvvIllTDg~~~~~~~~~~~~a~~l~~~GI~i~tVGi 169 (193)
T cd01477 132 KKVVIVFASDYNDEGSNDPRPIAARLKSTGIAIITVAF 169 (193)
T ss_pred CeEEEEEecCccCCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 356777775433 2213346789999999999999865
No 319
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=27.39 E-value=1.3e+02 Score=26.23 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=24.1
Q ss_pred eEEEEeccCCC--CchhHHHHHHHHHhcCCEEEeecc
Q 025027 58 AVLMISDIYGD--EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 58 ~vil~~~~~g~--~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+|.+...-|. +...-..+|..|+.+|+.|+++|.
T Consensus 105 ~vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~ 141 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDL 141 (387)
T ss_pred eEEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 45555533332 223456788999999999999998
No 320
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=27.39 E-value=74 Score=26.13 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHHhcCcccceEEEecCCCC------------C------------hhhhhcc-C
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNV------------T------------EDEIKAV-K 179 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~i~~~~~~~------------~------------~~~~~~~-~ 179 (259)
++++.|+++-..+-.|+|-+.|..++...+....++-++.++.... + .+-++.+ +
T Consensus 2 eil~~l~~~i~~~~pIig~gaGtGlsAk~ae~gGaDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp~v~~ 81 (268)
T PF09370_consen 2 EILDRLRAQIKAGKPIIGAGAGTGLSAKCAEKGGADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILPVVKD 81 (268)
T ss_dssp HHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTT-SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGGG-SS
T ss_pred hHHHHHHHHHhCCCceEEEeeccchhhHHHHhcCCCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhhhccC
Confidence 4566666552334577888999999999987777777777653211 1 1223444 4
Q ss_pred CcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCc
Q 025027 180 VPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCH 223 (259)
Q Consensus 180 ~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 223 (259)
.|++.-....|++.. ...+.+.++. .|. .-+.-||..++
T Consensus 82 tPViaGv~atDP~~~---~~~fl~~lk~-~Gf-~GV~NfPTvgl 120 (268)
T PF09370_consen 82 TPVIAGVCATDPFRD---MDRFLDELKE-LGF-SGVQNFPTVGL 120 (268)
T ss_dssp S-EEEEE-TT-TT-----HHHHHHHHHH-HT--SEEEE-S-GGG
T ss_pred CCEEEEecCcCCCCc---HHHHHHHHHH-hCC-ceEEECCccee
Confidence 799999999999864 4555555532 121 12445675554
No 321
>PHA02518 ParA-like protein; Provisional
Probab=27.14 E-value=1.2e+02 Score=23.25 Aligned_cols=22 Identities=18% Similarity=0.265 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..+|..|+++|+.|+++|.
T Consensus 16 T~a~~la~~la~~g~~vlliD~ 37 (211)
T PHA02518 16 TVATNLASWLHADGHKVLLVDL 37 (211)
T ss_pred HHHHHHHHHHHhCCCeEEEEeC
Confidence 3456788999999999999998
No 322
>PRK10279 hypothetical protein; Provisional
Probab=27.13 E-value=95 Score=26.05 Aligned_cols=30 Identities=37% Similarity=0.378 Sum_probs=23.9
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
+++.|...+...=.+.|-|+|+.++..++.
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHc
Confidence 566666666666799999999999998873
No 323
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.08 E-value=1.2e+02 Score=26.66 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=29.4
Q ss_pred CCCCCCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEee
Q 025027 51 GPPHSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAP 90 (259)
Q Consensus 51 ~~~~~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~ 90 (259)
.|...+|.||++-|.-|.. .....-+|.++-++||.+..+
T Consensus 95 ~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~Lv 135 (483)
T KOG0780|consen 95 QPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALV 135 (483)
T ss_pred ccccCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEE
Confidence 4445567889888877743 346678999999999987654
No 324
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.01 E-value=99 Score=25.89 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=25.4
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.-++++.|+.+. --+.+|.+||++|..++..|-
T Consensus 38 g~~vLITGgg~G---lGr~ialefa~rg~~~vl~Di 70 (300)
T KOG1201|consen 38 GEIVLITGGGSG---LGRLIALEFAKRGAKLVLWDI 70 (300)
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHhCCeEEEEec
Confidence 346777765553 237899999999999999987
No 325
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.72 E-value=1.8e+02 Score=24.78 Aligned_cols=27 Identities=22% Similarity=0.097 Sum_probs=21.2
Q ss_pred HHHHHcCCCcEEEEeechhHHHHHHHh
Q 025027 128 AALKAKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 128 ~~l~~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
...+..+.++|-++|-|++++++--+-
T Consensus 109 ~~~k~~~a~kvLvvGDslm~gla~gl~ 135 (354)
T COG2845 109 IAAKSRDADKVLVVGDSLMQGLAEGLD 135 (354)
T ss_pred hhhhCCCCCEEEEechHHhhhhHHHHH
Confidence 355556888999999999888877654
No 326
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=26.65 E-value=1e+02 Score=25.17 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 16 T~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 16 TTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred HHHHHHHHHHHhCCCEEEEEee
Confidence 4457789999999999999998
No 327
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=26.54 E-value=91 Score=23.58 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=25.2
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF 93 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~ 93 (259)
+|.+.|+.|... ..+++.|++.|+.|+..|..
T Consensus 1 ii~itG~~gsGK---st~~~~l~~~g~~~i~~D~~ 32 (179)
T cd02022 1 IIGLTGGIGSGK---STVAKLLKELGIPVIDADKI 32 (179)
T ss_pred CEEEECCCCCCH---HHHHHHHHHCCCCEEecCHH
Confidence 467888888764 47788888889999988864
No 328
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.54 E-value=2.1e+02 Score=23.44 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=41.4
Q ss_pred HHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCC-CcccccHHHHHHHHHHcCCCcEEEEe
Q 025027 74 RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT-DKGYEDAKPVIAALKAKGVSAVGAAG 142 (259)
Q Consensus 74 ~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~i~~l~~~~~~~i~l~G 142 (259)
..++....++|+.++.+-.+ +..... | ..+++ +-.+.++..++.+++.++.++|++.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~-~eaD~~---------~-~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLR-GEADPE---------L-KEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEec-Cccchh---------h-hcCCCeEEeHHHHHHHHHHHHHcCCcEEEEec
Confidence 57889999999999999884 332111 1 11222 35567889999999988888888887
No 329
>KOG2853 consensus Possible oxidoreductase [General function prediction only]
Probab=26.35 E-value=2.1e+02 Score=24.86 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=19.0
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
|+++ ||.+.....-.++-++....|+.|+++.-
T Consensus 89 VvII-GGG~~GsS~AfWLKer~rd~gl~VvVVEr 121 (509)
T KOG2853|consen 89 VVII-GGGGSGSSTAFWLKERARDEGLNVVVVER 121 (509)
T ss_pred EEEE-CCCccchhhHHHHHHHhhcCCceEEEEec
Confidence 4444 44443333334555555666899999975
No 330
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=26.29 E-value=38 Score=27.56 Aligned_cols=16 Identities=13% Similarity=0.135 Sum_probs=13.3
Q ss_pred CCCcEEEEeechhHHH
Q 025027 134 GVSAVGAAGFCWGGKV 149 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~ 149 (259)
+...|.++|||+|..=
T Consensus 233 ~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVD 248 (270)
T ss_pred CCCEEEEEeCCCchhh
Confidence 5579999999999753
No 331
>PLN02757 sirohydrochlorine ferrochelatase
Probab=26.03 E-value=2.8e+02 Score=20.63 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=33.0
Q ss_pred eeEEEEeccCCCC--chhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 57 KAVLMISDIYGDE--PPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 57 ~~vil~~~~~g~~--~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
..+|++.||.-.. ...+..+++.+.++ ++..+-.-+. . ...-++..+++.+.+.
T Consensus 14 ~~lllvgHGSrd~~a~~~~~~la~~l~~~~~~~~V~~aFl-e----------------------~~~Psl~eal~~l~~~ 70 (154)
T PLN02757 14 DGVVIVDHGSRRKESNLMLEEFVAMYKQKTGHPIVEPAHM-E----------------------LAEPSIKDAFGRCVEQ 70 (154)
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhCCCCcEEEEEE-e----------------------cCCCCHHHHHHHHHHC
Confidence 4677777665543 23556677777654 4433222221 0 0012466677777655
Q ss_pred CCCcEEEE
Q 025027 134 GVSAVGAA 141 (259)
Q Consensus 134 ~~~~i~l~ 141 (259)
+.++|+++
T Consensus 71 g~~~vvVv 78 (154)
T PLN02757 71 GASRVIVS 78 (154)
T ss_pred CCCEEEEE
Confidence 66666665
No 332
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=25.94 E-value=1.3e+02 Score=23.08 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=23.6
Q ss_pred EEEEeccCC-C-CchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYG-D-EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g-~-~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
+|.+...-| . +...-..+|..|++.|+.|+.+|.
T Consensus 19 vI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 19 VLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 455543333 2 233456789999999999999997
No 333
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=25.90 E-value=1.1e+02 Score=24.35 Aligned_cols=22 Identities=23% Similarity=0.206 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..+|..|+++|+.|+.+|.
T Consensus 17 t~a~nla~~la~~g~~VlliD~ 38 (246)
T TIGR03371 17 TLTANLASALKLLGEPVLAIDL 38 (246)
T ss_pred HHHHHHHHHHHhCCCcEEEEeC
Confidence 3456789999999999999998
No 334
>TIGR03566 FMN_reduc_MsuE FMN reductase, MsuE subfamily. Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the NADH-dependent enzyme MsuE from Pseudomonas aeruginosa, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. The NADP-dependent enzyme from E. coli is outside the scope of this model.
Probab=25.71 E-value=1.3e+02 Score=22.59 Aligned_cols=51 Identities=14% Similarity=0.021 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc--CCCcEEEEeec
Q 025027 71 PIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK--GVSAVGAAGFC 144 (259)
Q Consensus 71 ~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S 144 (259)
+.+..+.+.+.+. |+.+.+|.|.++.+ ..++.++|++... ..+++++++.|
T Consensus 57 ~~~~~~~~~i~~AD~iIi~tP~Y~~s~~-----------------------~~LKn~lD~~~~~~l~~K~~~~v~~~ 110 (174)
T TIGR03566 57 PDAERILQAIESADLLVVGSPVYRGSYT-----------------------GLFKHLFDLVDPNALIGKPVLLAATG 110 (174)
T ss_pred HHHHHHHHHHHHCCEEEEECCcCcCcCc-----------------------HHHHHHHHhcCHhHhCCCEEEEEEec
Confidence 4567777777776 78888888843333 4567777776421 34566666655
No 335
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=25.63 E-value=1.6e+02 Score=23.93 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=23.7
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhcCCE-EEeecc
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFL-VVAPDF 92 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~-v~~~d~ 92 (259)
+.+-|+++.-..+..........+.|.+.|+. |...+.
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i 65 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDV 65 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEec
Confidence 34557777755554434455667778888984 555555
No 336
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=25.58 E-value=4.3e+02 Score=22.59 Aligned_cols=79 Identities=13% Similarity=0.051 Sum_probs=46.1
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhcCCE---EEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFL---VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
.++|||+-.|. . +...+...++.+.+.|-. ++..--....+.... .-=...+..|+
T Consensus 132 ~gkPvilStGm-a-tl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~~~-------------------~~nL~~I~~Lk 190 (329)
T TIGR03569 132 FGKPVILSTGM-A-TLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAPFE-------------------DVNLNAMDTLK 190 (329)
T ss_pred cCCcEEEECCC-C-CHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCCcc-------------------cCCHHHHHHHH
Confidence 35677777776 3 446778888888888763 333322111111100 11224566776
Q ss_pred HcCCCcEEEEeechhHHHHHHHh
Q 025027 132 AKGVSAVGAAGFCWGGKVAVKLA 154 (259)
Q Consensus 132 ~~~~~~i~l~G~S~Gg~~a~~~a 154 (259)
+.-.-+|++.+|+.|-.+++...
T Consensus 191 ~~f~~pVG~SdHt~G~~~~~aAv 213 (329)
T TIGR03569 191 EAFDLPVGYSDHTLGIEAPIAAV 213 (329)
T ss_pred HHhCCCEEECCCCccHHHHHHHH
Confidence 65346899999999976665533
No 337
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=25.53 E-value=1.1e+02 Score=24.06 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=27.8
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeecc
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDF 92 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~ 92 (259)
..+-|+++.-..+....+...+.+.|.+. |+.+...+.
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~ 68 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHL 68 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEec
Confidence 34557777766665555667788889999 999888875
No 338
>PRK08177 short chain dehydrogenase; Provisional
Probab=25.42 E-value=1.1e+02 Score=23.82 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=23.1
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|. .-..++++|+++|+.|++.+.
T Consensus 3 ~vlItG~sg~---iG~~la~~l~~~G~~V~~~~r 33 (225)
T PRK08177 3 TALIIGASRG---LGLGLVDRLLERGWQVTATVR 33 (225)
T ss_pred EEEEeCCCch---HHHHHHHHHHhCCCEEEEEeC
Confidence 3556665553 236789999999999999876
No 339
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=25.25 E-value=1.3e+02 Score=22.57 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
-+++.|..++...=.+.|-|.|+.++..++.
T Consensus 17 Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 17 GVLKALEEAGIPIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred HHHHHHHHcCCCeeEEEEECHHHHHHHHHHc
Confidence 3555555544444589999999999999884
No 340
>PF01121 CoaE: Dephospho-CoA kinase; InterPro: IPR001977 This family contains dephospho-CoA kinases (2.7.1.24 from EC), which catalyzes the final step in CoA biosynthesis, the phosphorylation of the 3'-hydroxyl group of ribose using ATP as a phosphate donor. The crystal structures of a number of the proteins in this entry have been determined, including the structure of the protein from Haemophilus influenzae to 2.0-A resolution in a comlex with ATP. The protein consists of three domains: the nucleotide-binding domain with a five-stranded parallel beta-sheet, the substrate-binding alpha-helical domain, and the lid domain formed by a pair of alpha-helices; the overall topology of the protein resembles the structures of other nucleotide kinases [].; GO: 0004140 dephospho-CoA kinase activity, 0005524 ATP binding, 0015937 coenzyme A biosynthetic process; PDB: 1VHL_A 1N3B_A 1VIY_A 1VHT_B 1T3H_B 1UF9_C 2F6R_A 2GRJ_D 2IF2_C 1JJV_A.
Probab=25.21 E-value=1.1e+02 Score=23.37 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=25.2
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF 93 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~ 93 (259)
+|-+.|+.|+.. ..+++.|++.||.|+-.|-.
T Consensus 2 iIglTG~igsGK---Stv~~~l~~~G~~vidaD~i 33 (180)
T PF01121_consen 2 IIGLTGGIGSGK---STVSKILAELGFPVIDADEI 33 (180)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHTT-EEEEHHHH
T ss_pred EEEEECCCcCCH---HHHHHHHHHCCCCEECccHH
Confidence 577888888764 57888999999999999963
No 341
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=24.66 E-value=2.2e+02 Score=18.96 Aligned_cols=25 Identities=12% Similarity=0.264 Sum_probs=14.3
Q ss_pred EEEEeccCCC--CchhHHHHHHHHHhc
Q 025027 59 VLMISDIYGD--EPPIYRSVADKVAGA 83 (259)
Q Consensus 59 vil~~~~~g~--~~~~~~~~a~~la~~ 83 (259)
+|++.||... ....+..+++.+.++
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 4455444433 123567788888776
No 342
>PRK10673 acyl-CoA esterase; Provisional
Probab=24.65 E-value=3.4e+02 Score=21.17 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=35.0
Q ss_pred CCcEEEeecCCCCCCChHHHHHHHHHHhcCCCCCceEEecCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 025027 179 KVPIAVLGAERDNGLPPAQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 253 (259)
Q Consensus 179 ~~Pvl~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 253 (259)
..|++++||..+. ......+...+.. ...++.++--||+.+..... ...++..+++.+++++
T Consensus 16 ~~~iv~lhG~~~~---~~~~~~~~~~l~~----~~~vi~~D~~G~G~s~~~~~------~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGS---LDNLGVLARDLVN----DHDIIQVDMRNHGLSPRDPV------MNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCc---hhHHHHHHHHHhh----CCeEEEECCCCCCCCCCCCC------CCHHHHHHHHHHHHHH
Confidence 5689999997654 2344555666632 23455555557876543221 1234555666666654
No 343
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=24.65 E-value=1.3e+02 Score=23.88 Aligned_cols=30 Identities=30% Similarity=0.311 Sum_probs=22.0
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
+++.|...+.+.=.+.|-|.|+.++..++.
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHc
Confidence 455555444444579999999999999884
No 344
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=24.63 E-value=2.5e+02 Score=19.60 Aligned_cols=23 Identities=13% Similarity=0.057 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHhcCCEEEeeccC
Q 025027 71 PIYRSVADKVAGAGFLVVAPDFF 93 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~~ 93 (259)
.....+++.|.++||.|..+...
T Consensus 11 ~~~~~~~~~L~~~g~~V~ii~~~ 33 (139)
T PF13477_consen 11 TFIYNLAKELKKRGYDVHIITPR 33 (139)
T ss_pred HHHHHHHHHHHHCCCEEEEEEcC
Confidence 35678899999999999998873
No 345
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=24.57 E-value=75 Score=25.96 Aligned_cols=89 Identities=12% Similarity=0.173 Sum_probs=43.0
Q ss_pred EEEeccCCCCchhHHHHHHHHHhcCC-------EEEeeccCCCC-CCCCCCCCcchhhhhhccCCCcccccHHHHHHHHH
Q 025027 60 LMISDIYGDEPPIYRSVADKVAGAGF-------LVVAPDFFHGD-AANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 131 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~a~~la~~G~-------~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 131 (259)
|++.|........-..+...+.++|. +++.+|. .|. .............+.+.........++.++++.++
T Consensus 28 iv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~-~Gll~~~r~~l~~~~~~~a~~~~~~~~~~~L~eav~~~k 106 (255)
T PF03949_consen 28 IVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDS-KGLLTDDREDLNPHKKPFARKTNPEKDWGSLLEAVKGAK 106 (255)
T ss_dssp EEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEET-TEEEBTTTSSHSHHHHHHHBSSSTTT--SSHHHHHHCH-
T ss_pred EEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEec-cceEeccCccCChhhhhhhccCcccccccCHHHHHHhcC
Confidence 44444333322334456666666687 5899998 442 11111111111222222111222246667766664
Q ss_pred HcCCCcEEEEeec-hhHHHHHHHh
Q 025027 132 AKGVSAVGAAGFC-WGGKVAVKLA 154 (259)
Q Consensus 132 ~~~~~~i~l~G~S-~Gg~~a~~~a 154 (259)
+-+|+|-| .||.+.-.+.
T Consensus 107 -----PtvLIG~S~~~g~ft~evv 125 (255)
T PF03949_consen 107 -----PTVLIGLSGQGGAFTEEVV 125 (255)
T ss_dssp ------SEEEECSSSTTSS-HHHH
T ss_pred -----CCEEEEecCCCCcCCHHHH
Confidence 45999999 8887665544
No 346
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=24.52 E-value=1.2e+02 Score=22.83 Aligned_cols=44 Identities=14% Similarity=0.097 Sum_probs=23.8
Q ss_pred cccHHHHHHHHHHcCCCcEEEEeechhHHHHHHHhcC-c-ccceEEE
Q 025027 120 YEDAKPVIAALKAKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVL 164 (259)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~i~ 164 (259)
.+++.+.++.++.. ..+|+++|-|..|.+.+.+..- + .|..++=
T Consensus 54 ~~~l~~~L~~~~~~-gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 54 KAELREFLEKLKAE-GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHHT-T--EEEE---SHHHHHHHHHT--TTTS--EEE
T ss_pred HHHHHHHHHHHHHc-CCEEEEECcchHHHHHHHHhCCCcceeEEEEe
Confidence 34455555555554 4789999999999998887732 3 4555553
No 347
>PHA01735 hypothetical protein
Probab=24.45 E-value=57 Score=20.55 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=17.6
Q ss_pred CcccccHHHHHHHHHHcCCCcEEE
Q 025027 117 DKGYEDAKPVIAALKAKGVSAVGA 140 (259)
Q Consensus 117 ~~~~~d~~~~i~~l~~~~~~~i~l 140 (259)
+....|+.++++||++++..-+..
T Consensus 29 eATtaDL~AA~d~Lk~NdItgv~~ 52 (76)
T PHA01735 29 EATTADLRAACDWLKSNDITGVAV 52 (76)
T ss_pred cccHHHHHHHHHHHHHCCCceeeC
Confidence 445589999999999886544433
No 348
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=24.14 E-value=1.2e+02 Score=24.48 Aligned_cols=22 Identities=14% Similarity=0.016 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 15 T~~~nLA~~La~~g~rVLliD~ 36 (268)
T TIGR01281 15 TTSSNLSVAFAKLGKRVLQIGC 36 (268)
T ss_pred HHHHHHHHHHHhCCCeEEEEec
Confidence 3456789999999999999998
No 349
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=24.12 E-value=2.4e+02 Score=23.86 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=27.1
Q ss_pred eeEEEEe----ccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMIS----DIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~----~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
-+||.+- ||.|.+ +....+++.|.++|+.+.++.-
T Consensus 28 vPVIsVGNitvGGTGKT-P~v~~La~~l~~~G~~~~IlSR 66 (311)
T TIGR00682 28 VPVVIVGNLSVGGTGKT-PVVVWLAELLKDRGLRVGVLSR 66 (311)
T ss_pred CCEEEEeccccCCcChH-HHHHHHHHHHHHCCCEEEEECC
Confidence 3567665 555654 6888999999999999988874
No 350
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=24.06 E-value=1.1e+02 Score=24.29 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=23.3
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|. .-..++++|+++|+.|+..+.
T Consensus 12 ~vlItGa~g~---iG~~ia~~l~~~G~~V~~~~r 42 (255)
T PRK07523 12 RALVTGSSQG---IGYALAEGLAQAGAEVILNGR 42 (255)
T ss_pred EEEEECCcch---HHHHHHHHHHHcCCEEEEEeC
Confidence 4666666554 236899999999999998765
No 351
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=24.05 E-value=1.4e+02 Score=24.14 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 16 T~~~nLA~~La~~G~kVlliD~ 37 (270)
T cd02040 16 TTTQNLSAALAEMGKKVMIVGC 37 (270)
T ss_pred HHHHHHHHHHHhCCCeEEEEEc
Confidence 4457789999999999999998
No 352
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=23.94 E-value=1.5e+02 Score=23.33 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=31.4
Q ss_pred eCCeeeEEeCCCC-CCeeEEEEeccCCC-CchhHHHHHHHHH-hcCCEEEeeccCCCC
Q 025027 42 LGGLKAYVTGPPH-SKKAVLMISDIYGD-EPPIYRSVADKVA-GAGFLVVAPDFFHGD 96 (259)
Q Consensus 42 ~~~~~~~~~~~~~-~~~~vil~~~~~g~-~~~~~~~~a~~la-~~G~~v~~~d~~~g~ 96 (259)
..++++++...+- .+... +.|..|. +......+.+.+. +.|+.++++|. +|.
T Consensus 9 ~~~v~v~l~~~~l~~~H~~--I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~-~GE 63 (229)
T PF01935_consen 9 DSDVPVYLDLNKLFNRHIA--IFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDP-HGE 63 (229)
T ss_pred CCCceEEeeHHHhccceEE--EECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcC-CCc
Confidence 3445666554321 23333 3333442 2346677889999 88999999999 554
No 353
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=23.79 E-value=2.5e+02 Score=19.33 Aligned_cols=19 Identities=32% Similarity=0.352 Sum_probs=14.0
Q ss_pred HHHHHHHHHhcCCEEEeec
Q 025027 73 YRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 73 ~~~~a~~la~~G~~v~~~d 91 (259)
...++..|.+.||.|+...
T Consensus 16 ~~~~~~~l~~~G~~V~~lg 34 (119)
T cd02067 16 KNIVARALRDAGFEVIDLG 34 (119)
T ss_pred HHHHHHHHHHCCCEEEECC
Confidence 3557778888899996654
No 354
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=23.73 E-value=1.3e+02 Score=24.54 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 15 T~a~nLA~~La~~G~~VlliD~ 36 (275)
T TIGR01287 15 TTTQNIAAALAEMGKKVMIVGC 36 (275)
T ss_pred HHHHHHHHHHHHCCCeEEEEeC
Confidence 4457799999999999999998
No 355
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=23.62 E-value=1.7e+02 Score=24.64 Aligned_cols=31 Identities=19% Similarity=0.247 Sum_probs=24.9
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|.-. ..++++|.++|+.|+..+.
T Consensus 8 ~vlVTGatGfiG---~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 8 VALITGITGQDG---SYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred EEEEECCCCccH---HHHHHHHHHCCCEEEEEec
Confidence 477888777642 6899999999999998865
No 356
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=23.33 E-value=1.2e+02 Score=25.45 Aligned_cols=31 Identities=26% Similarity=0.299 Sum_probs=24.0
Q ss_pred HHHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 125 PVIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 125 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
-+++.|..++..-=.+.|-|+|+.++..++.
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 3566666665555689999999999999884
No 357
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=23.06 E-value=1.2e+02 Score=22.77 Aligned_cols=17 Identities=24% Similarity=0.427 Sum_probs=14.5
Q ss_pred HHHHHHHHhcCCEEEee
Q 025027 74 RSVADKVAGAGFLVVAP 90 (259)
Q Consensus 74 ~~~a~~la~~G~~v~~~ 90 (259)
..+|..|+++||..++-
T Consensus 117 ~ELA~qL~~egyL~~C~ 133 (170)
T KOG3349|consen 117 LELAKQLAEEGYLYYCT 133 (170)
T ss_pred HHHHHHHHhcCcEEEee
Confidence 56899999999988774
No 358
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=22.95 E-value=1.4e+02 Score=19.80 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..++..++++|..|+.+|.
T Consensus 15 t~~~~la~~~~~~~~~vl~~d~ 36 (104)
T cd02042 15 TTAVNLAAALARRGKRVLLIDL 36 (104)
T ss_pred HHHHHHHHHHHhCCCcEEEEeC
Confidence 3456788999999999999987
No 359
>PRK06194 hypothetical protein; Provisional
Probab=22.94 E-value=1.1e+02 Score=24.76 Aligned_cols=31 Identities=23% Similarity=0.127 Sum_probs=23.4
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|.- -..++++|+++|+.|++.|.
T Consensus 8 ~vlVtGasggI---G~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 8 VAVITGAASGF---GLAFARIGAALGMKLVLADV 38 (287)
T ss_pred EEEEeCCccHH---HHHHHHHHHHCCCEEEEEeC
Confidence 46676666542 36899999999999998875
No 360
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=22.92 E-value=1e+02 Score=25.98 Aligned_cols=29 Identities=28% Similarity=0.263 Sum_probs=21.7
Q ss_pred HHHHHHc--CCCcEEEEeechhHHHHHHHhc
Q 025027 127 IAALKAK--GVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 127 i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
++.+..+ +.++-.+.|||+|=+.++.++.
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 4444443 3667899999999999998873
No 361
>TIGR03586 PseI pseudaminic acid synthase.
Probab=22.89 E-value=4.8e+02 Score=22.25 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=45.8
Q ss_pred CCeeEEEEeccCCCCchhHHHHHHHHHhcCC-EEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHc
Q 025027 55 SKKAVLMISDIYGDEPPIYRSVADKVAGAGF-LVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 55 ~~~~vil~~~~~g~~~~~~~~~a~~la~~G~-~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 133 (259)
.+.|||+-.|. + +...+...++.+.+.|- .++..-- .+..+. +... -+ ..++..+++.
T Consensus 133 ~gkPvilstG~-~-t~~Ei~~Av~~i~~~g~~~i~LlhC---~s~YP~-~~~~--------------~n-L~~i~~lk~~ 191 (327)
T TIGR03586 133 TGKPIIMSTGI-A-TLEEIQEAVEACREAGCKDLVLLKC---TSSYPA-PLED--------------AN-LRTIPDLAER 191 (327)
T ss_pred cCCcEEEECCC-C-CHHHHHHHHHHHHHCCCCcEEEEec---CCCCCC-Cccc--------------CC-HHHHHHHHHH
Confidence 34677777666 3 45677888888988876 3444322 111111 1010 12 2456667655
Q ss_pred CCCcEEEEeechhHHHHHHH
Q 025027 134 GVSAVGAAGFCWGGKVAVKL 153 (259)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~ 153 (259)
-.-+|++..|+.|-.+++..
T Consensus 192 f~~pVG~SDHt~G~~~~~aA 211 (327)
T TIGR03586 192 FNVPVGLSDHTLGILAPVAA 211 (327)
T ss_pred hCCCEEeeCCCCchHHHHHH
Confidence 34689999999996655553
No 362
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=22.69 E-value=2.1e+02 Score=24.54 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=29.3
Q ss_pred CCCeeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeec
Q 025027 54 HSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 54 ~~~~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d 91 (259)
..+|.||++-|..|.. .....-+|.+|-++|+.|+...
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA 174 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA 174 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe
Confidence 3457788888887743 3456778999999999999874
No 363
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=22.64 E-value=1.6e+02 Score=22.20 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=22.2
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
+++.|..++..-=.+.|-|.|+..+..++.
T Consensus 18 vl~~L~e~g~~~d~i~GtSaGAi~aa~~a~ 47 (175)
T cd07228 18 VLRALEEEGIEIDIIAGSSIGALVGALYAA 47 (175)
T ss_pred HHHHHHHCCCCeeEEEEeCHHHHHHHHHHc
Confidence 455555444445689999999999999874
No 364
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=22.52 E-value=98 Score=26.05 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=22.4
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeec
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d 91 (259)
-.-++.|+.+.- -+..|++||++||.|+.+.
T Consensus 50 ~WAVVTGaTDGI---GKayA~eLAkrG~nvvLIs 80 (312)
T KOG1014|consen 50 SWAVVTGATDGI---GKAYARELAKRGFNVVLIS 80 (312)
T ss_pred CEEEEECCCCcc---hHHHHHHHHHcCCEEEEEe
Confidence 355555544432 3789999999999999885
No 365
>PTZ00445 p36-lilke protein; Provisional
Probab=22.52 E-value=4e+02 Score=21.23 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=56.9
Q ss_pred hHHHHHHHHHhcCCEEEeeccC------CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCCcEEEEeech
Q 025027 72 IYRSVADKVAGAGFLVVAPDFF------HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCW 145 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~ 145 (259)
.-..+.+.|.+.|..+++.|+= +..|+.... .+.... ......++..++..+.+.+ -+|.++-||-
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~--~~~~~~-----~~~~tpefk~~~~~l~~~~-I~v~VVTfSd 101 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD--NDDIRV-----LTSVTPDFKILGKRLKNSN-IKISVVTFSD 101 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC--cchhhh-----hccCCHHHHHHHHHHHHCC-CeEEEEEccc
Confidence 4466888899999999999982 111222111 000001 1123356777777776543 4789999884
Q ss_pred h--------------HHHHHHHhc----CcccceEEEecCC-CCChhhhh
Q 025027 146 G--------------GKVAVKLAS----NQDVQAAVLLHPS-NVTEDEIK 176 (259)
Q Consensus 146 G--------------g~~a~~~a~----~~~i~~~i~~~~~-~~~~~~~~ 176 (259)
= +-++-.... .-.|+.+.+++|. ...+..+.
T Consensus 102 ~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~ 151 (219)
T PTZ00445 102 KELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYR 151 (219)
T ss_pred hhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhh
Confidence 3 335544442 2378889999996 34444443
No 366
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.46 E-value=1.4e+02 Score=23.50 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=23.2
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHhcC
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLASN 156 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (259)
+++.|...+..-=.+.|-|.|+..+..++..
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~ 46 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGG 46 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 4555555544556899999999999998854
No 367
>CHL00175 minD septum-site determining protein; Validated
Probab=22.46 E-value=1.5e+02 Score=24.18 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=23.5
Q ss_pred EEEEeccCC-C-CchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYG-D-EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g-~-~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
+|.+.++-| . +...-..+|..|+++|+.|+.+|.
T Consensus 17 vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~ 52 (281)
T CHL00175 17 IIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDA 52 (281)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 455544333 2 223456789999999999999987
No 368
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=22.36 E-value=3.4e+02 Score=24.52 Aligned_cols=60 Identities=22% Similarity=0.133 Sum_probs=41.7
Q ss_pred hHHHHHHHHHhcCCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCCcEEEEeechhHHHHH
Q 025027 72 IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVSAVGAAGFCWGGKVAV 151 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~ 151 (259)
.....+..|.+.|..++++|.-+|++ ..+.+.++++++.-++-.++.|+..-.-.+.
T Consensus 225 ~~~~ra~~Lv~aGVd~i~~D~a~g~~-----------------------~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~ 281 (475)
T TIGR01303 225 DVGGKAKALLDAGVDVLVIDTAHGHQ-----------------------VKMISAIKAVRALDLGVPIVAGNVVSAEGVR 281 (475)
T ss_pred cHHHHHHHHHHhCCCEEEEeCCCCCc-----------------------HHHHHHHHHHHHHCCCCeEEEeccCCHHHHH
Confidence 45678889999999999999865553 3466778888775444556667665555555
Q ss_pred HHh
Q 025027 152 KLA 154 (259)
Q Consensus 152 ~~a 154 (259)
.+.
T Consensus 282 ~l~ 284 (475)
T TIGR01303 282 DLL 284 (475)
T ss_pred HHH
Confidence 554
No 369
>PRK12828 short chain dehydrogenase; Provisional
Probab=22.35 E-value=1.4e+02 Score=23.13 Aligned_cols=31 Identities=26% Similarity=0.193 Sum_probs=23.7
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|.- -..+++.|+++|+.|+..+.
T Consensus 9 ~vlItGatg~i---G~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGL---GRATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcH---hHHHHHHHHHCCCeEEEEeC
Confidence 46667766643 36899999999999998875
No 370
>PRK08339 short chain dehydrogenase; Provisional
Probab=22.28 E-value=1.3e+02 Score=24.14 Aligned_cols=31 Identities=23% Similarity=0.059 Sum_probs=22.9
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
++++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 10 ~~lItGas~g---IG~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTASSKG---IGFGVARVLARAGADVILLSR 40 (263)
T ss_pred EEEEeCCCCc---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566665543 236899999999999998764
No 371
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=22.27 E-value=3.8e+02 Score=20.81 Aligned_cols=37 Identities=22% Similarity=0.147 Sum_probs=24.8
Q ss_pred CeeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 56 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 56 ~~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+-|+++.-..+........+.+.|.+.|+.+..+..
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~ 65 (210)
T cd03129 29 GARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLL 65 (210)
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEec
Confidence 4557777665555445566677888888987776654
No 372
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=22.22 E-value=1.5e+02 Score=23.55 Aligned_cols=23 Identities=22% Similarity=0.059 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHhcCCEEEeeccC
Q 025027 71 PIYRSVADKVAGAGFLVVAPDFF 93 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~~ 93 (259)
..-..+|..|+++|+.|+.+|.=
T Consensus 17 t~a~~lA~~la~~g~~vlliD~D 39 (261)
T TIGR01968 17 TTTANLGTALARLGKKVVLIDAD 39 (261)
T ss_pred HHHHHHHHHHHHcCCeEEEEECC
Confidence 34567899999999999999983
No 373
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=22.21 E-value=2.7e+02 Score=26.03 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=40.3
Q ss_pred CeeEEEEeccCCCCc--hhHHHHHHHHHhcCCEEEeeccC-CCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHH
Q 025027 56 KKAVLMISDIYGDEP--PIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKA 132 (259)
Q Consensus 56 ~~~vil~~~~~g~~~--~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 132 (259)
+.|++++||....+. +....+...|.++|..|-..-+. .+|+... .+.....+..+++|++.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---------------~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---------------PENRVKVLKEILDWFKR 615 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---------------chhHHHHHHHHHHHHHH
Confidence 468999999877553 35567888899999887777664 2444322 12223456677777764
No 374
>COG0237 CoaE Dephospho-CoA kinase [Coenzyme metabolism]
Probab=22.03 E-value=1.7e+02 Score=22.92 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=26.3
Q ss_pred eEEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 58 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 58 ~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+|-+.|+.|+.. ..+++.|++.||.|+..|-
T Consensus 3 ~iIglTG~igsGK---Stva~~~~~~G~~vidaD~ 34 (201)
T COG0237 3 LIIGLTGGIGSGK---STVAKILAELGFPVIDADD 34 (201)
T ss_pred eEEEEecCCCCCH---HHHHHHHHHcCCeEEEccH
Confidence 4677888888764 5788899998999999986
No 375
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=21.99 E-value=87 Score=26.02 Aligned_cols=22 Identities=14% Similarity=0.030 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 15 Tta~nLA~~La~~G~rVLlID~ 36 (290)
T CHL00072 15 TTSCNISIALARRGKKVLQIGC 36 (290)
T ss_pred HHHHHHHHHHHHCCCeEEEEec
Confidence 4557789999999999999998
No 376
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=21.98 E-value=1.3e+02 Score=24.82 Aligned_cols=34 Identities=6% Similarity=0.102 Sum_probs=25.3
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhcCCEEEeec
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPD 91 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d 91 (259)
..||++|.... +......+.+.|.++||.++.++
T Consensus 231 G~IILmHd~~~-T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTAS-STEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCcc-HHHHHHHHHHHHHHCCCEEEeHH
Confidence 35888886543 33566778899999999998875
No 377
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.92 E-value=1.3e+02 Score=25.18 Aligned_cols=30 Identities=33% Similarity=0.345 Sum_probs=24.8
Q ss_pred HHHHHHHcCCCcEEEEeechhHHHHHHHhc
Q 025027 126 VIAALKAKGVSAVGAAGFCWGGKVAVKLAS 155 (259)
Q Consensus 126 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (259)
+++.|...+...-.+.|-|+|+.++..+|.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHc
Confidence 566666666677899999999999999884
No 378
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=21.86 E-value=73 Score=26.02 Aligned_cols=22 Identities=14% Similarity=0.081 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|-.|+++|+.|+++|.
T Consensus 16 T~~~nLA~~La~~G~rVLlID~ 37 (274)
T PRK13235 16 TTTQNTVAGLAEMGKKVMVVGC 37 (274)
T ss_pred HHHHHHHHHHHHCCCcEEEEec
Confidence 4557789999999999999998
No 379
>PRK07326 short chain dehydrogenase; Provisional
Probab=21.84 E-value=1.5e+02 Score=23.14 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=23.1
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|. .-..++++|+++|+.|++.+-
T Consensus 8 ~ilItGatg~---iG~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 8 VALITGGSKG---IGFAIAEALLAEGYKVAITAR 38 (237)
T ss_pred EEEEECCCCc---HHHHHHHHHHHCCCEEEEeeC
Confidence 4666666554 236899999999999998864
No 380
>PRK09072 short chain dehydrogenase; Provisional
Probab=21.82 E-value=1.3e+02 Score=23.99 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=23.3
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.+. .-..+++.|+++|+.|++.+.
T Consensus 7 ~vlItG~s~~---iG~~ia~~l~~~G~~V~~~~r 37 (263)
T PRK09072 7 RVLLTGASGG---IGQALAEALAAAGARLLLVGR 37 (263)
T ss_pred EEEEECCCch---HHHHHHHHHHHCCCEEEEEEC
Confidence 4666665553 336899999999999998874
No 381
>PRK06924 short chain dehydrogenase; Provisional
Probab=21.67 E-value=1.3e+02 Score=23.79 Aligned_cols=30 Identities=13% Similarity=0.226 Sum_probs=22.1
Q ss_pred EEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 60 LMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
+++.|+.|. .-..++++|+++|+.|+..+.
T Consensus 4 vlItGasgg---iG~~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 4 VIITGTSQG---LGEAIANQLLEKGTHVISISR 33 (251)
T ss_pred EEEecCCch---HHHHHHHHHHhcCCEEEEEeC
Confidence 555555543 336899999999999988864
No 382
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=21.47 E-value=1.7e+02 Score=24.77 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=25.9
Q ss_pred EEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC-CCC
Q 025027 60 LMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGD 96 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~ 96 (259)
|++.||-|.-. ...+.+|.+.||.|+++|-. .|+
T Consensus 3 iLVtGGAGYIG---SHtv~~Ll~~G~~vvV~DNL~~g~ 37 (329)
T COG1087 3 VLVTGGAGYIG---SHTVRQLLKTGHEVVVLDNLSNGH 37 (329)
T ss_pred EEEecCcchhH---HHHHHHHHHCCCeEEEEecCCCCC
Confidence 67777777532 56788899999999999986 343
No 383
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.46 E-value=4.9e+02 Score=21.78 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=24.2
Q ss_pred CCcEEEEeechhHHHHHHHhc-----CcccceEEEecCC
Q 025027 135 VSAVGAAGFCWGGKVAVKLAS-----NQDVQAAVLLHPS 168 (259)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~-----~~~i~~~i~~~~~ 168 (259)
..|+.+.|-|+|+.-+-..-. ..++.+++...|.
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 458999999999887766431 2367777776653
No 384
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=21.41 E-value=1.4e+02 Score=23.74 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=23.4
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlItGas~~---iG~~ia~~l~~~G~~v~~~~r 38 (257)
T PRK07067 8 VALLTGAASG---IGEAVAERYLAEGARVVIADI 38 (257)
T ss_pred EEEEeCCCch---HHHHHHHHHHHcCCEEEEEcC
Confidence 4566665553 236899999999999998875
No 385
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=21.39 E-value=2.1e+02 Score=24.37 Aligned_cols=35 Identities=14% Similarity=0.028 Sum_probs=24.0
Q ss_pred eEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeecc
Q 025027 58 AVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 58 ~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
-+|.+.+-.|.. ...-..++..|+++|+.|+.+|.
T Consensus 32 ~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 32 QIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 355555544432 23446688999999999999987
No 386
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=21.35 E-value=4.2e+02 Score=21.04 Aligned_cols=99 Identities=10% Similarity=0.166 Sum_probs=53.0
Q ss_pred HHHHHHcCCCcEEEEeechhHHHHHHHhcC-----c-----ccceEEEecCCCCChhhhhccCCcEEEeecCCCCCCC-h
Q 025027 127 IAALKAKGVSAVGAAGFCWGGKVAVKLASN-----Q-----DVQAAVLLHPSNVTEDEIKAVKVPIAVLGAERDNGLP-P 195 (259)
Q Consensus 127 i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~-----~i~~~i~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~-~ 195 (259)
.+.++..+..+.-++|-|+|--+..++..- + ....+..+--...+...+..+..-+-++.--+|.++. |
T Consensus 83 cs~~kkld~mkkkvlGICFGHQiiara~Gg~Vgra~KG~~~~lg~itivk~~~~~~~yFG~~~~~l~IikcHqDevle~P 162 (245)
T KOG3179|consen 83 CSFVKKLDFMKKKVLGICFGHQIIARAKGGKVGRAPKGPDLGLGSITIVKDAEKPEKYFGEIPKSLNIIKCHQDEVLELP 162 (245)
T ss_pred HHHHHHHHhhccceEEEeccHHHHHHhhCCccccCCCCCcccccceEEEEecccchhhcccchhhhhHHhhcccceecCC
Confidence 333333355568899999999998887622 2 1222222222222223333444445566677888753 5
Q ss_pred HHHHHHHHHHhcCCCCCceEEecCCCCccccccCCC
Q 025027 196 AQMKRFDEILSAKPKFDHLVKTYPGVCHGWTVRYFV 231 (259)
Q Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~ 231 (259)
+.++.+... ....+++..++ .|.++..+-+
T Consensus 163 E~a~llasS----e~ceve~fs~~--~~~l~fQGHP 192 (245)
T KOG3179|consen 163 EGAELLASS----EKCEVEMFSIE--DHLLCFQGHP 192 (245)
T ss_pred chhhhhccc----cccceEEEEec--ceEEEecCCc
Confidence 555543322 22244554444 7887765544
No 387
>PRK00131 aroK shikimate kinase; Reviewed
Probab=21.22 E-value=1.5e+02 Score=21.80 Aligned_cols=33 Identities=12% Similarity=0.289 Sum_probs=24.3
Q ss_pred eeEEEEeccCCCCchhHHHHHHHHHhc-CCEEEeecc
Q 025027 57 KAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~ 92 (259)
+..|++.|..|... ..+++.|+++ |+.++-.|.
T Consensus 4 ~~~i~l~G~~GsGK---stla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGFMGAGK---STIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCeEEEEcCCCCCH---HHHHHHHHHHhCCCEEEChH
Confidence 45788888888764 5788888876 787776664
No 388
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=21.14 E-value=3.8e+02 Score=22.83 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=54.2
Q ss_pred EEEeccCCCCchhHHHHHHHHHhcC--CEEEeeccC-CCCCCCCCCCCcchhhhhhc---cCCCcccccHHHHHHHHHHc
Q 025027 60 LMISDIYGDEPPIYRSVADKVAGAG--FLVVAPDFF-HGDAANPSNPKYDKDTWRKN---HTTDKGYEDAKPVIAALKAK 133 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~a~~la~~G--~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~i~~l~~~ 133 (259)
|+++ |+|++......+++.+.... +.|++++-+ .+... +.--..+...... .......+.+..+++.+...
T Consensus 57 lL~Y-G~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~--k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~ 133 (326)
T PF04084_consen 57 LLFY-GYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSI--KDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESR 133 (326)
T ss_pred EEEE-ecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcH--HHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhcc
Confidence 3444 57777777788888777763 556666532 12110 0000001111111 11123334455566666654
Q ss_pred C-CCcEEEEeechhHHH--------HHH-HhcCcccceEEEec
Q 025027 134 G-VSAVGAAGFCWGGKV--------AVK-LASNQDVQAAVLLH 166 (259)
Q Consensus 134 ~-~~~i~l~G~S~Gg~~--------a~~-~a~~~~i~~~i~~~ 166 (259)
. ..++.|+=|+.=|.. ++. +|..|+|.-++.+.
T Consensus 134 ~~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIASiD 176 (326)
T PF04084_consen 134 PSPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIASID 176 (326)
T ss_pred CCCCceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEecc
Confidence 3 678999999977665 222 44667777665543
No 389
>PRK08643 acetoin reductase; Validated
Probab=21.11 E-value=1.5e+02 Score=23.48 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=22.8
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
++++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 4 ~~lItGas~g---iG~~la~~l~~~G~~v~~~~r 34 (256)
T PRK08643 4 VALVTGAGQG---IGFAIAKRLVEDGFKVAIVDY 34 (256)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4556555554 236899999999999998875
No 390
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=21.07 E-value=1.7e+02 Score=23.77 Aligned_cols=22 Identities=14% Similarity=0.057 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 17 T~~~nLA~~la~~G~kVLliD~ 38 (270)
T PRK13185 17 TTSSNLSAAFAKLGKKVLQIGC 38 (270)
T ss_pred HHHHHHHHHHHHCCCeEEEEec
Confidence 4567799999999999999998
No 391
>PRK10037 cell division protein; Provisional
Probab=21.05 E-value=84 Score=25.28 Aligned_cols=22 Identities=23% Similarity=0.060 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.....+|..|+++|+.|+++|.
T Consensus 17 T~a~nLA~~La~~G~rVLlID~ 38 (250)
T PRK10037 17 SITAALAWSLQMLGENVLVIDA 38 (250)
T ss_pred HHHHHHHHHHHhcCCcEEEEeC
Confidence 3457789999999999999998
No 392
>PRK07890 short chain dehydrogenase; Provisional
Probab=21.02 E-value=1.6e+02 Score=23.35 Aligned_cols=31 Identities=29% Similarity=0.275 Sum_probs=23.1
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 7 ~vlItGa~~~---IG~~la~~l~~~G~~V~~~~r 37 (258)
T PRK07890 7 VVVVSGVGPG---LGRTLAVRAARAGADVVLAAR 37 (258)
T ss_pred EEEEECCCCc---HHHHHHHHHHHcCCEEEEEeC
Confidence 3556665553 236899999999999998874
No 393
>PRK03094 hypothetical protein; Provisional
Probab=20.94 E-value=1.1e+02 Score=20.06 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhcCCEEEeecc
Q 025027 72 IYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~ 92 (259)
....+.++|.++||.|+-++.
T Consensus 9 ~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 9 SLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred CcHHHHHHHHHCCCEEEecCc
Confidence 456789999999999997754
No 394
>PRK00081 coaE dephospho-CoA kinase; Reviewed
Probab=20.77 E-value=2e+02 Score=22.14 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=25.2
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeeccC
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF 93 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~~ 93 (259)
+|.+.|+.|+.. ..+++.|++.|+.++-.|-.
T Consensus 4 ~i~ltG~~gsGK---st~~~~l~~~g~~~i~~D~~ 35 (194)
T PRK00081 4 IIGLTGGIGSGK---STVANLFAELGAPVIDADAI 35 (194)
T ss_pred EEEEECCCCCCH---HHHHHHHHHcCCEEEEecHH
Confidence 678888888764 46777888889999888863
No 395
>PRK13236 nitrogenase reductase; Reviewed
Probab=20.77 E-value=1.6e+02 Score=24.46 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=23.6
Q ss_pred EEEEeccCCC-CchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGD-EPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~-~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
+|-+.|=.|. +...-..+|-.|+++|+.|+.+|.
T Consensus 8 ~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~ 42 (296)
T PRK13236 8 QIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGC 42 (296)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 4444543332 233456789999999999999998
No 396
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=20.65 E-value=3.9e+02 Score=22.04 Aligned_cols=26 Identities=19% Similarity=0.249 Sum_probs=19.9
Q ss_pred CCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 67 GDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 67 g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
|........+++.|.++|+.|..+..
T Consensus 12 gG~~~~~~~l~~~L~~~g~~v~v~~~ 37 (360)
T cd04951 12 GGAEKQVVDLADQFVAKGHQVAIISL 37 (360)
T ss_pred CCHHHHHHHHHHhcccCCceEEEEEE
Confidence 44445667899999999998887765
No 397
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=20.65 E-value=2.3e+02 Score=23.05 Aligned_cols=36 Identities=22% Similarity=0.145 Sum_probs=24.0
Q ss_pred eeEEEEeccCCCC-chhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~~~~g~~-~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
+.|.+.....|.. ...-..+|..+++.|..|+.+|.
T Consensus 104 ~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 104 KALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 3344444333322 23456789999999999999998
No 398
>PRK08703 short chain dehydrogenase; Provisional
Probab=20.45 E-value=1.7e+02 Score=22.96 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=22.9
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlItG~sgg---iG~~la~~l~~~g~~V~~~~r 38 (239)
T PRK08703 8 TILVTGASQG---LGEQVAKAYAAAGATVILVAR 38 (239)
T ss_pred EEEEECCCCc---HHHHHHHHHHHcCCEEEEEeC
Confidence 4566665553 236789999999999998874
No 399
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family. This subfamily of the adenylate kinase superfamily contains examples of UMP-CMP kinase, as well as others proteins with unknown specificity, some currently designated adenylate kinase. All known members are eukaryotic.
Probab=20.38 E-value=1.4e+02 Score=22.34 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=22.1
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhc-CCEEEeec
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPD 91 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d 91 (259)
||++.|..|+.. ..+++.|+++ |+..+..+
T Consensus 1 ~i~i~G~pGsGK---st~a~~la~~~~~~~is~~ 31 (183)
T TIGR01359 1 VVFVLGGPGSGK---GTQCAKIVENFGFTHLSAG 31 (183)
T ss_pred CEEEECCCCCCH---HHHHHHHHHHcCCeEEECC
Confidence 578888888764 4677778776 88888773
No 400
>PRK08265 short chain dehydrogenase; Provisional
Probab=20.37 E-value=1.5e+02 Score=23.74 Aligned_cols=31 Identities=26% Similarity=0.181 Sum_probs=23.3
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlItGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (261)
T PRK08265 8 VAIVTGGATL---IGAAVARALVAAGARVAIVDI 38 (261)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 5666665553 347899999999999998875
No 401
>PRK06101 short chain dehydrogenase; Provisional
Probab=20.31 E-value=1.3e+02 Score=23.64 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=22.7
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|. .-..+++.|+++|+.|+..+-
T Consensus 3 ~vlItGas~g---iG~~la~~L~~~G~~V~~~~r 33 (240)
T PRK06101 3 AVLITGATSG---IGKQLALDYAKQGWQVIACGR 33 (240)
T ss_pred EEEEEcCCcH---HHHHHHHHHHhCCCEEEEEEC
Confidence 3566665553 336899999999999988864
No 402
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=20.26 E-value=2.3e+02 Score=23.10 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=21.5
Q ss_pred EEEeccCCCCchhHHHH-HHHHHhcC-CEEEeecc
Q 025027 60 LMISDIYGDEPPIYRSV-ADKVAGAG-FLVVAPDF 92 (259)
Q Consensus 60 il~~~~~g~~~~~~~~~-a~~la~~G-~~v~~~d~ 92 (259)
|.+.|=.|........+ +.+|.++| |.|+++|.
T Consensus 3 IaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 3 IAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred EEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 44555444443445554 77777775 99999997
No 403
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=20.22 E-value=1.6e+02 Score=23.39 Aligned_cols=31 Identities=32% Similarity=0.298 Sum_probs=23.3
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.+. .-..++++|+++|+.|+..+.
T Consensus 10 ~vlVtGas~g---IG~~la~~l~~~G~~v~~~~r 40 (260)
T PRK12823 10 VVVVTGAAQG---IGRGVALRAAAEGARVVLVDR 40 (260)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4666665554 236899999999999998875
No 404
>PRK05876 short chain dehydrogenase; Provisional
Probab=20.20 E-value=1.6e+02 Score=24.01 Aligned_cols=31 Identities=23% Similarity=0.098 Sum_probs=22.5
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlVTGas~g---IG~ala~~La~~G~~Vv~~~r 38 (275)
T PRK05876 8 GAVITGGASG---IGLATGTEFARRGARVVLGDV 38 (275)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566665543 236889999999999988764
No 405
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.17 E-value=3.3e+02 Score=24.75 Aligned_cols=73 Identities=21% Similarity=0.145 Sum_probs=43.2
Q ss_pred EEeccCCCCchhHHHHHHHHHhc-CCEEEeeccCCCCCCCCCCCCcchhhhhhccCCCcccccHHHHHHHHHHcCCCcEE
Q 025027 61 MISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKAKGVSAVG 139 (259)
Q Consensus 61 l~~~~~g~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~ 139 (259)
++--|+|........-|-..|++ ||.|+.+|-- |+-... . .-+.++-..++...++.|.
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTA-GR~~~~-------~------------~lm~~l~k~~~~~~pd~i~ 501 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTA-GRMHNN-------A------------PLMTSLAKLIKVNKPDLIL 501 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEecc-ccccCC-------h------------hHHHHHHHHHhcCCCceEE
Confidence 44566776544445555566655 9999999983 431110 0 1222333334444678999
Q ss_pred EEeechhHHHHHHH
Q 025027 140 AAGFCWGGKVAVKL 153 (259)
Q Consensus 140 l~G~S~Gg~~a~~~ 153 (259)
.+|--+=|.-++.-
T Consensus 502 ~vgealvg~dsv~q 515 (587)
T KOG0781|consen 502 FVGEALVGNDSVDQ 515 (587)
T ss_pred EehhhhhCcHHHHH
Confidence 99988777666653
No 406
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=20.16 E-value=1.1e+02 Score=20.06 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=17.9
Q ss_pred hHHHHHHHHHhcCCEEEeecc
Q 025027 72 IYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 72 ~~~~~a~~la~~G~~v~~~d~ 92 (259)
....+.++|.++||.|+-++-
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 456789999999999999875
No 407
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=20.12 E-value=1.7e+02 Score=24.38 Aligned_cols=22 Identities=14% Similarity=0.031 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHhcCCEEEeecc
Q 025027 71 PIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 71 ~~~~~~a~~la~~G~~v~~~d~ 92 (259)
..-..++..|+++|+.|+.+|.
T Consensus 15 T~a~nLA~~La~~g~rVLlID~ 36 (296)
T TIGR02016 15 FTTTNLSHMMAEMGKRVLQLGC 36 (296)
T ss_pred HHHHHHHHHHHHCCCeEEEEEe
Confidence 4556789999999999999998
No 408
>PRK05717 oxidoreductase; Validated
Probab=20.05 E-value=1.5e+02 Score=23.51 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=24.0
Q ss_pred EEEEeccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 59 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 59 vil~~~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
.+++.|+.|. .-..+++.|+++|+.|+..|.
T Consensus 12 ~vlItG~sg~---IG~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 12 VALVTGAARG---IGLGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred EEEEeCCcch---HHHHHHHHHHHcCCEEEEEcC
Confidence 5667776654 236899999999999999875
No 409
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=20.02 E-value=2.5e+02 Score=24.02 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=26.5
Q ss_pred eeEEEEe----ccCCCCchhHHHHHHHHHhcCCEEEeecc
Q 025027 57 KAVLMIS----DIYGDEPPIYRSVADKVAGAGFLVVAPDF 92 (259)
Q Consensus 57 ~~vil~~----~~~g~~~~~~~~~a~~la~~G~~v~~~d~ 92 (259)
-+||.+- ||.|.+ +....+++.|.++|+.+.++.-
T Consensus 56 vPVIsVGNitvGGTGKT-P~v~~La~~l~~~G~~~~IlSR 94 (338)
T PRK01906 56 VPVVVVGNVTVGGTGKT-PTVIALVDALRAAGFTPGVVSR 94 (338)
T ss_pred CCEEEECCccCCCCChH-HHHHHHHHHHHHcCCceEEEec
Confidence 3566665 556654 6888999999999998888764
Done!