BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025029
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XGM1|VATD_ARATH V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D
PE=1 SV=2
Length = 261
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/259 (79%), Positives = 234/259 (90%), Gaps = 1/259 (0%)
Query: 2 AQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEV 61
QN RL VVPTVTMLGVMK+RLVGATRGHALLKKKSDALTVQFR +LK IVT KESMG++
Sbjct: 3 GQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGDM 62
Query: 62 MKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKND 121
MK SSFAL E KYVAG+N+KH+VLENV+ A++KVRSR ENIAGVK+PKF++F++GETKND
Sbjct: 63 MKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKND 122
Query: 122 LTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRL 181
LTGLARGGQQV+ CR AYVKAIE+LVELASLQTSFLTLDEAIKTTNRRVNALENVVKP+L
Sbjct: 123 LTGLARGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPKL 182
Query: 182 ENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGISI 241
ENTI+YIKGELDELEREDFFRLKKIQGYK+RE+ERQ A++K+F EE E +S+Q+GISI
Sbjct: 183 ENTISYIKGELDELEREDFFRLKKIQGYKRREVERQAANAKEFAEEMVLEDISMQRGISI 242
Query: 242 KSAQNLLSAG-EKDEDIIF 259
+A+N L G EKD DIIF
Sbjct: 243 NAARNFLVGGAEKDSDIIF 261
>sp|Q9V7D2|VATD1_DROME V-type proton ATPase subunit D 1 OS=Drosophila melanogaster
GN=Vha36-1 PE=2 SV=1
Length = 246
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 185/259 (71%), Gaps = 13/259 (5%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ RL + P+ +MK+RL GA +GH LLKKK+DAL ++FR IL I+ TK MG+
Sbjct: 1 MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VMK+++F+L EAK+ +G +I +VL+NV A IK+R++++N+AGV +P FE + DG
Sbjct: 61 VMKEAAFSLAEAKFTSG-DINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+L GLARGGQQ+ + + Y A++LLVELASLQTSF+TLDE IK TNRRVNA+E+V+ PR
Sbjct: 120 ELAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGIS 240
++ T+ YI ELDELERE+F+RLKKIQ KKRE R A +K+ AE LQ+GI
Sbjct: 180 IDRTLAYIISELDELEREEFYRLKKIQD-KKRE-ARIKADAKK------AE--LLQQGID 229
Query: 241 IKSAQNLLSAGEKDEDIIF 259
++ N+L G D+D++F
Sbjct: 230 VRQQANILDEG--DDDVLF 246
>sp|Q9NEF6|VATD2_DROME Probable V-type proton ATPase subunit D 2 OS=Drosophila
melanogaster GN=Vha36-3 PE=3 SV=1
Length = 249
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 181/259 (69%), Gaps = 10/259 (3%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
MA RL + P+ +MKSRL GAT+GH LLKKK+DAL ++FR IL I+ TK MG+
Sbjct: 1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VMK+++F+L E K+ G +I IVL+NV A IK+R++++N+AGV +P FE +TDG
Sbjct: 61 VMKEAAFSLAEVKFTTG-DINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+L GLARGGQQ+ + + Y A+ LLV+LASLQTSF+TLD+ IK TNRRVNA+E+V+ PR
Sbjct: 120 ELAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGIS 240
+ TI YI ELDELERE+F+RLKKIQ KKRE + AS K E++ +++
Sbjct: 180 INRTIEYIISELDELEREEFYRLKKIQD-KKREARK--ASDKLRAEQRLLGQMA-----E 231
Query: 241 IKSAQNLLSAGEKDEDIIF 259
+ QN+L + DED++F
Sbjct: 232 AQEVQNILDE-DGDEDLLF 249
>sp|Q5RCS8|VATD_PONAB V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1
Length = 247
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 185/259 (71%), Gaps = 13/259 (5%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ R+ + P+ +MK+RL GA G LLKKKSDALT++FRQILK I+ TK MGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VM++++F+L EAK+ AG + V++NV A +K+R++++N+AGV +P FE++ +G
Sbjct: 61 VMREAAFSLAEAKFTAG-DFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+LTGLARGG+Q+ + + Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA+E+V+ PR
Sbjct: 120 ELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGIS 240
+E T+ YI ELDE ERE+F+RLKKIQ KK E+ S++ +E++ A L+
Sbjct: 180 IERTLAYIITELDEREREEFYRLKKIQEKKKILKEK----SEKDLEQRRAAGEVLEPA-- 233
Query: 241 IKSAQNLLSAGEKDEDIIF 259
NLL A EKDED++F
Sbjct: 234 -----NLL-AEEKDEDLLF 246
>sp|Q9Y5K8|VATD_HUMAN V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1
Length = 247
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 185/259 (71%), Gaps = 13/259 (5%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ R+ + P+ +MK+RL GA G LLKKKSDALT++FRQILK I+ TK MGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VM++++F+L EAK+ AG + V++NV A +K+R++++N+AGV +P FE++ +G
Sbjct: 61 VMREAAFSLAEAKFTAG-DFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+LTGLARGG+Q+ + + Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA+E+V+ PR
Sbjct: 120 ELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGIS 240
+E T+ YI ELDE ERE+F+RLKKIQ KK E+ S++ +E++ A L+
Sbjct: 180 IERTLAYIITELDEREREEFYRLKKIQEKKKILKEK----SEKDLEQRRAAGEVLEPA-- 233
Query: 241 IKSAQNLLSAGEKDEDIIF 259
NLL A EKDED++F
Sbjct: 234 -----NLL-AEEKDEDLLF 246
>sp|O97755|VATD_RABIT V-type proton ATPase subunit D OS=Oryctolagus cuniculus GN=ATP6V1D
PE=2 SV=1
Length = 247
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 181/259 (69%), Gaps = 13/259 (5%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ R+ + P+ +MK+RL GA G LLKKKSDALT++FRQILK I+ TK MGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VM++++F+L EAK+ AG + ++NV A +K+R++++N+AGV +P FE++ +G
Sbjct: 61 VMREAAFSLAEAKFTAG-DFSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+LTGLARGG+Q+ + + Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA+E+V+ PR
Sbjct: 120 ELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGIS 240
+E T+ YI ELDE ERE+F+RLKKIQ KK E+ S K + + A +V
Sbjct: 180 IERTLAYIITELDEREREEFYRLKKIQEKKKILKEK---SEKDLEQRRAAGEVM------ 230
Query: 241 IKSAQNLLSAGEKDEDIIF 259
NLL A EKDED++F
Sbjct: 231 --EPANLL-AEEKDEDLLF 246
>sp|P39942|VATD_BOVIN V-type proton ATPase subunit D OS=Bos taurus GN=ATP6V1D PE=1 SV=1
Length = 247
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/259 (51%), Positives = 184/259 (71%), Gaps = 13/259 (5%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ R+ + P+ +MK+RL GA G LLKKKSDALT++FRQILK I+ TK MGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VM++++F+L EAK+ AG + V++NV A +K+R++++N+AGV +P FE++ +G
Sbjct: 61 VMREAAFSLAEAKFTAG-DFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+LTGLARGG+Q+ + + Y KA+ELLVELASLQTSF+TLDEAIK TNRRVN +E+V+ PR
Sbjct: 120 ELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNRIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGIS 240
+E T+ YI ELDE ERE+F+RLKKIQ KK E+ S K + + A +V
Sbjct: 180 IERTLAYIITELDEREREEFYRLKKIQEKKKILKEK---SDKDLEQRRAAGEV------- 229
Query: 241 IKSAQNLLSAGEKDEDIIF 259
I+ A NLL A EKDED++F
Sbjct: 230 IEPA-NLL-AEEKDEDLLF 246
>sp|P34462|VATD_CAEEL V-type proton ATPase subunit D OS=Caenorhabditis elegans GN=vha-14
PE=3 SV=1
Length = 257
Score = 241 bits (614), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 176/254 (69%), Gaps = 5/254 (1%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
R+ V P+ +MK+RL GA +GH+LLKKK+DAL ++FR IL+ IV K MGEVMK++
Sbjct: 8 RIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVMKEA 67
Query: 66 SFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGL 125
+F+L EAK+ AG+ H V++NV A +VR ++EN+ GV +P F+ + DG DLTGL
Sbjct: 68 AFSLAEAKFTAGD-FSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDLTGL 126
Query: 126 ARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTI 185
+GG + + + Y KAIELLVELA+LQT F+TLDEAIK TNRRVNA+E+V+ PR+ENT+
Sbjct: 127 GKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIENTL 186
Query: 186 TYIKGELDELEREDFFRLKKIQGYKKREIERQLASSKQFVEEQFAEKVSLQKGISIKSAQ 245
TYI ELDE+ERE+FFR+KKIQ KK+ ++ Q A+ K E + + +
Sbjct: 187 TYIVTELDEMEREEFFRMKKIQANKKK-LKEQEAAQKALEGPGPGEDAAHSEN---NPPR 242
Query: 246 NLLSAGEKDEDIIF 259
NLL++ E + ++F
Sbjct: 243 NLLASEEDNLPVLF 256
>sp|Q61IU3|VATD_CAEBR V-type proton ATPase subunit D OS=Caenorhabditis briggsae GN=vha-14
PE=3 SV=1
Length = 259
Score = 240 bits (613), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
R+ V P+ +MK+RL GA +GH+LLKKK+DAL ++FR ILK IV K MGEVMK++
Sbjct: 9 RIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILKKIVENKVLMGEVMKEA 68
Query: 66 SFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGL 125
+F+L EAK+ AG+ H V++NV A +VR ++EN+ GV +P F+ + DG DLTGL
Sbjct: 69 AFSLAEAKFTAGD-FSHTVIQNVSQAQYRVRMKKENVVGVLLPVFDAYQDGPDAYDLTGL 127
Query: 126 ARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTI 185
+GG + + + Y KAIELLVELA+LQT F+TLDEAIK TNRRVNA+E+V+ PR+ENT+
Sbjct: 128 GKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIENTL 187
Query: 186 TYIKGELDELEREDFFRLKKIQGYKKREIERQLA 219
TYI ELDE+ERE+FFR+KKIQ KK+ E++ A
Sbjct: 188 TYIVTELDEMEREEFFRMKKIQANKKKLKEQEAA 221
>sp|Q86A77|VATD_DICDI V-type proton ATPase subunit D OS=Dictyostelium discoideum
GN=atp6v1d PE=1 SV=1
Length = 257
Score = 238 bits (607), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 154/205 (75%), Gaps = 3/205 (1%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ RL + PT L VMK++L GA GH+LLKKKSDALT++FR+IL NIV K+ MG
Sbjct: 1 MSGKNRLNIFPTRMALTVMKTKLKGAVTGHSLLKKKSDALTIRFRRILANIVENKQLMGT 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
M+D+SF+L AKY AGE + V+ENV N +I V+ EN+AGV +P FE ++G N
Sbjct: 61 TMRDASFSLAAAKYAAGE-FSNSVIENVSNPTIAVKMTTENVAGVHLPTFEKISEGVVSN 119
Query: 121 --DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVK 178
+LTGL++GGQQ+ + R +++KA+E L+ LASLQT+F+TLDE IK TNRRVNA+E VVK
Sbjct: 120 SQELTGLSKGGQQINKSRESHIKAVEALIALASLQTAFITLDEVIKITNRRVNAIEYVVK 179
Query: 179 PRLENTITYIKGELDELEREDFFRL 203
P+LENTI+YI ELDE ERE+F+RL
Sbjct: 180 PKLENTISYIITELDESEREEFYRL 204
>sp|P57747|VATD_SUBDO V-type proton ATPase subunit D OS=Suberites domuncula GN=VATPD PE=2
SV=1
Length = 250
Score = 234 bits (596), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 158/203 (77%), Gaps = 1/203 (0%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ R+ V P+ L +MK+RL GA +GH+LLK+K+DALT++FRQIL I+ TK MGE
Sbjct: 1 MSGKDRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VMK+++F+L EAK+VAG + +VL+NV A I++ ++++N+AGV +P FE ++DG
Sbjct: 61 VMKEATFSLAEAKFVAG-DFSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSDGSDTY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+LTGL+RGGQ V +C+ + KA+ LLVELASLQT+F+TLDE IK TNRRVNA+E+V+ P+
Sbjct: 120 ELTGLSRGGQLVSKCKEVFGKAVRLLVELASLQTAFVTLDEVIKVTNRRVNAIEHVIIPK 179
Query: 181 LENTITYIKGELDELEREDFFRL 203
++ T++YI ELDE ERE+F+RL
Sbjct: 180 IQRTLSYISIELDEREREEFYRL 202
>sp|P57746|VATD_MOUSE V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1
Length = 247
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 181/266 (68%), Gaps = 27/266 (10%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ R+ + P+ +MK+RL GA G LLKKKSDALT++FRQILK I+ TK MGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VM++++F+L EAK+ AG + V++NV A +K+R++++N+AGV +P FE++ +G
Sbjct: 61 VMREAAFSLAEAKFTAG-DFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+LTGLARGG+Q+ + + Y KA+ELLVELASLQTSF+TLDEAIK TNRRVNA+E+V+ PR
Sbjct: 120 ELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRL-------KKIQGYKKREIERQLASSKQFVEEQFAEKV 233
+E T+ YI ELDE ERE+F+RL K I+ ++++ER+ A+ +
Sbjct: 180 IERTLAYIITELDEREREEFYRLKKIQEKKKIIKEKFEKDLERRRAAGE----------- 228
Query: 234 SLQKGISIKSAQNLLSAGEKDEDIIF 259
+ NLL A EKDED++F
Sbjct: 229 -------VMEPANLL-AEEKDEDLLF 246
>sp|P32610|VATD_YEAST V-type proton ATPase subunit D OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA8 PE=1 SV=1
Length = 256
Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 154/210 (73%), Gaps = 3/210 (1%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
R V PT LG+MK++L GA +G++LLK+KS+ALT +FR I K I K+ MG VM+ +
Sbjct: 5 REQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTA 64
Query: 66 SFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKND--LT 123
+F+L E Y GENI + V E+V A KVR+RQEN++GV + +FE + D E ND LT
Sbjct: 65 AFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEI-NDFRLT 123
Query: 124 GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
GL RGGQQVQ+ + Y +A+E LVELASLQT+F+ LDE IK TNRRVNA+E+V+ PR EN
Sbjct: 124 GLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTEN 183
Query: 184 TITYIKGELDELEREDFFRLKKIQGYKKRE 213
TI YI ELDEL+RE+F+RLKK+Q K+ E
Sbjct: 184 TIAYINSELDELDREEFYRLKKVQEKKQNE 213
>sp|Q9U0S4|VATD_MANSE V-type proton ATPase subunit D OS=Manduca sexta PE=2 SV=1
Length = 246
Score = 231 bits (588), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M+ RL + P+ +MK RL GA +GH LLKKK+DAL V+FR IL I+ TK MGE
Sbjct: 1 MSGKDRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VMK+++F+L EAK+ G + +VL+NV A IK+RS+++N+AGV +P FE + DG
Sbjct: 61 VMKEAAFSLAEAKFTTG-DFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 119
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
+L GLARGGQQ+ + + + A++LLVELASLQTSF+TLDE IK TNRRVNA+E+V+ PR
Sbjct: 120 ELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPR 179
Query: 181 LENTITYIKGELDELEREDFFRL 203
LE T+ YI ELDELERE+F+RL
Sbjct: 180 LERTLAYIISELDELEREEFYRL 202
>sp|O59941|VATD_NEUCR V-type proton ATPase subunit D OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-8 PE=2 SV=2
Length = 264
Score = 231 bits (588), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 177/261 (67%), Gaps = 10/261 (3%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
R V PT LG+MK++L GA GH+LLK+KS+ALT +FR+I + I K MG VM+ +
Sbjct: 7 REAVFPTRQSLGIMKAKLKGAETGHSLLKRKSEALTKRFREITRRIDEAKRKMGRVMQIA 66
Query: 66 SFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFE-YFTDGETKNDLTG 124
S +L E Y G NI + + E+ ++A ++R++QEN++GV +P FE Y +G +TG
Sbjct: 67 SLSLAEVTYAVGGNIGYQIQESAKSARFRIRAKQENVSGVLLPAFEAYQAEGNDDFAMTG 126
Query: 125 LARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENT 184
L +GGQQVQ+CR Y +A+E LVELASLQT+F+ LDE IK NRRVNA+E+V+ PR ENT
Sbjct: 127 LGKGGQQVQRCRETYARAVEALVELASLQTAFVILDEVIKVVNRRVNAIEHVIIPRTENT 186
Query: 185 ITYIKGELDELEREDFFRLKKIQGYKKR---EIERQLASSKQFVEEQ---FAEKVSLQKG 238
I YI ELDEL+RE+F+RLKK+ K+R E + Q+ + K E+Q A+ + +
Sbjct: 187 IKYINSELDELDREEFYRLKKVAAKKQRDNAETDAQMKAKK--AEQQRLALADSENAEGE 244
Query: 239 ISIKSAQNLLSAGEKDEDIIF 259
+ + ++L+A E+DED+IF
Sbjct: 245 QTENTPADILAA-EEDEDVIF 264
>sp|P87220|VATD_CANAL V-type proton ATPase subunit D OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=VMA8 PE=3 SV=1
Length = 267
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 150/203 (73%), Gaps = 3/203 (1%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
R V PT LGVMKS+L GA +GH+LLK+KS+ALT +FR I + I K MG VM+ +
Sbjct: 7 REQVFPTRMTLGVMKSKLKGAQQGHSLLKRKSEALTKRFRDITQRIDDAKRKMGRVMQTA 66
Query: 66 SFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKND--LT 123
+F+L E +Y G+NI + V E+VQ A V+++QEN++GV +P F+ + E ND LT
Sbjct: 67 AFSLAEVQYATGDNISYQVQESVQKARFTVKAKQENVSGVFLPTFDSHIN-EDVNDFKLT 125
Query: 124 GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
LARGGQQVQ+ + Y KA+E LVELASLQT+F+ LDE IK TNRRVNA+E+V+ PR EN
Sbjct: 126 ALARGGQQVQKAKLIYSKAVETLVELASLQTAFIILDEVIKITNRRVNAIEHVIIPRTEN 185
Query: 184 TITYIKGELDELEREDFFRLKKI 206
TI YI GELDE++RE+F+RLKK+
Sbjct: 186 TIAYINGELDEMDREEFYRLKKV 208
>sp|O59823|VATD_SCHPO V-type proton ATPase subunit D OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma8 PE=1 SV=1
Length = 285
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 151/212 (71%), Gaps = 3/212 (1%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
MA QR V PT L MK+RL GA GH+LLK+KS+AL +FR+I+ NI K+ MG
Sbjct: 1 MASKQRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGR 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN 120
VM+ ++F++ E + G NI + ++V+ ++VRS+QENI+GV +P FE D E+ +
Sbjct: 61 VMQIAAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLD-ESID 119
Query: 121 D--LTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVK 178
D LTGL +GGQQ+Q+ R Y KA+E LV+LAS Q++F+ L + ++ TNRRVN++E+++
Sbjct: 120 DFQLTGLGKGGQQIQKARQVYEKAVETLVQLASYQSAFVLLGDVLQMTNRRVNSIEHIII 179
Query: 179 PRLENTITYIKGELDELEREDFFRLKKIQGYK 210
PRLENTI YI+ EL+ELEREDF RLKK+Q K
Sbjct: 180 PRLENTIKYIESELEELEREDFTRLKKVQKTK 211
>sp|Q8TUS9|VATD_METKA V-type ATP synthase subunit D OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=atpD PE=3 SV=1
Length = 232
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 7/215 (3%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
M Q V PT L ++ R+ A +GH LLK+K DAL ++F +++K +E +
Sbjct: 1 MTQEILEDVNPTRMELLKLQDRIELAKKGHKLLKEKRDALIMEFFEMVKRASEIREQAVK 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNAS---IKVRSRQENIAGVKIPKFEYFTDGE 117
+ ++ L AK GE I +E A+ IKV N+ GV +P E ++
Sbjct: 61 KLMEAYSKLAAAKVTVGE----IGVERASMATGEEIKVDVGSRNVMGVVVPIIERVSEDG 116
Query: 118 TKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVV 177
+ G A + + A+ +AI+ ++ELA ++ + + E I+ T RRVNALE++V
Sbjct: 117 GSKVVYGFADTSGALDEAMRAFTEAIDAVLELAEIEETLRLMAEEIERTKRRVNALEHIV 176
Query: 178 KPRLENTITYIKGELDELEREDFFRLKKIQGYKKR 212
PRLENT YI+ +LDE ERE+F RLK+++ +R
Sbjct: 177 IPRLENTEKYIEMKLDEQERENFVRLKRVKDLIER 211
>sp|Q8U4A4|VATD_PYRFU V-type ATP synthase subunit D OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=atpD PE=3 SV=1
Length = 214
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 112/208 (53%), Gaps = 12/208 (5%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESM----GEVM 62
L V PT L +K R+ A RGH LLK+K DAL ++F I ++ + + GE
Sbjct: 5 LKVKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSMRRELIKKIGEAF 64
Query: 63 KDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDL 122
+ A +E V +K I + N I+VRSR NI GV++P E + + K
Sbjct: 65 EALRLAQVE---VGSVRLKEIAIGVNPNKEIEVRSR--NIMGVRVPLIEV-PELKRKPSE 118
Query: 123 TGLA--RGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
G A V + + +EL + LA ++ S L + I+ T RRVNALE ++ PR
Sbjct: 119 RGYAFISTSSAVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPR 178
Query: 181 LENTITYIKGELDELEREDFFRLKKIQG 208
++NTI +I+ LDE+ERE+FFRLK+I+
Sbjct: 179 MKNTIKFIEQHLDEMERENFFRLKRIKA 206
>sp|Q9UXU9|VATD_PYRAB V-type ATP synthase subunit D OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=atpD PE=3 SV=1
Length = 214
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSS 66
L + PT L +K R+ A RGH LLK+K DAL ++F I ++ + + + M+++
Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
Query: 67 FALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGL 125
AL A+ G +K I + N I++R+R NI GV++P E +D G
Sbjct: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTR--NIMGVRVPLIEVPELKRKASD-RGY 121
Query: 126 A--RGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
A V + + +EL + LA ++ S L + I+ T RRVNALE ++ PR++N
Sbjct: 122 AFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKN 181
Query: 184 TITYIKGELDELEREDFFRLKKIQG 208
TI +I+ LDE+ERE+FFRLK+++
Sbjct: 182 TIKFIEQHLDEMERENFFRLKRVKA 206
>sp|O57731|VATD_PYRHO V-type ATP synthase subunit D OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=atpD PE=3 SV=1
Length = 214
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSS 66
L + PT L +K R+ A RGH LLK+K DAL ++F I ++ + + M+++
Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIRKMEEAF 64
Query: 67 FALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGL 125
+L A+ G +K I + N I++++R NI GV++P E + + K G
Sbjct: 65 NSLRRAQVDVGALRLKEIAIGVKPNKEIEIKTR--NIMGVRVPLIEV-PELKRKASERGY 121
Query: 126 A--RGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
A V + + +EL + LA ++ S L + I+ T RRVNALE ++ PR+EN
Sbjct: 122 AFVSTTSTVDMAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMEN 181
Query: 184 TITYIKGELDELEREDFFRLKKIQG 208
TI +I+ LDE+ERE+FFRLK+++
Sbjct: 182 TIKFIEQHLDEMERENFFRLKRVKA 206
>sp|Q5JIR1|VATD_PYRKO V-type ATP synthase subunit D OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpD PE=3 SV=1
Length = 214
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 4/204 (1%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSS 66
L V PT L +K R+ A +GH LLK K DAL ++F I + +E + E M ++
Sbjct: 5 LNVKPTRMELLNLKRRITLAKKGHKLLKDKQDALVMEFFTIYDEALRLREELNEKMMEAF 64
Query: 67 FALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDL-TG 124
AL A+ G +K I L N ++V++R N+ GV +P E + + +
Sbjct: 65 KALQRAEIDVGTLRMKEISLSVKPNREVEVKTR--NVMGVPVPLIEAESFKRSAGERGYA 122
Query: 125 LARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENT 184
+V + + ++L V LA ++ + L + I+ T RRVNALE ++ PR+E T
Sbjct: 123 FVSSSARVDLAAEKFEEVLDLAVRLAEVEETLKRLAKEIEVTKRRVNALEYIIIPRMEAT 182
Query: 185 ITYIKGELDELEREDFFRLKKIQG 208
+ +IK LDE+ERE+FFRLK+++
Sbjct: 183 VKFIKQRLDEMERENFFRLKRVKA 206
>sp|Q58032|VATD_METJA V-type ATP synthase subunit D OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpD PE=3 SV=1
Length = 216
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 10/196 (5%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F QI++ ++ + + ++ LI A+ V G +K
Sbjct: 21 AEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAEAYKDLIMAQTVMGTLAVKEAA 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTD----GETKNDLTGLARGGQQVQQCRAAYV 140
L +N ++V +NI GV +P FE + GE G++ ++ + +
Sbjct: 81 L-AAKNDKLEVDMDTKNIMGVTVPTFEIYNVRRKVGERGYSPYGVS---SKLDEAAKKFE 136
Query: 141 KAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDF 200
+A+EL+ ELA ++TS L E I TT RRVNALE V+ PRL++ YI LDE+ERE+F
Sbjct: 137 EALELITELAEIETSIKLLAEEIITTKRRVNALEYVIIPRLKSLKKYISMRLDEMERENF 196
Query: 201 FRLKKIQG-YKKREIE 215
FRLK I+ +KRE E
Sbjct: 197 FRLKLIKSRIEKREAE 212
>sp|B6YV16|VATD_THEON V-type ATP synthase subunit D OS=Thermococcus onnurineus (strain
NA1) GN=atpD PE=3 SV=1
Length = 212
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 4/204 (1%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSS 66
L V PT L +K R+ A +GH LLK K DAL ++F I ++ +E +G M+++
Sbjct: 5 LNVKPTRMELLNLKRRIKLAKKGHKLLKDKQDALIMEFFTIYDEALSLREELGRKMEEAF 64
Query: 67 FALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDL-TG 124
AL A+ G +K I L N + ++ R N+ GV +P E + + ++
Sbjct: 65 KALQMAEIDVGMLRLKEISLSVEPNKEVDIKKR--NVMGVSVPLIEAESFRRSTSERGYA 122
Query: 125 LARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENT 184
+V + + ++L V LA ++ + L I+ T RRVNALE ++ PR+E T
Sbjct: 123 FVSSSPRVDLAAEKFEEVLDLAVRLAEVEETLKRLAREIEVTKRRVNALEYIIIPRMEAT 182
Query: 185 ITYIKGELDELEREDFFRLKKIQG 208
+ +IK LDE+ERE+FFRLK+++
Sbjct: 183 VKFIKQRLDEMERENFFRLKRVKA 206
>sp|A5UKB0|VATD_METS3 V-type ATP synthase subunit D OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=atpD PE=3 SV=1
Length = 231
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 6/211 (2%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
MAQ+ + PT L +K+R A +GH LLK+K DAL +F IL + +E+
Sbjct: 1 MAQDIIDGINPTRMELLSLKNRTKLAVKGHGLLKEKRDALIKEFFDILDRVKGVREAAER 60
Query: 61 VMKDSSFALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETK 119
+K+++ AL+EA+ G+ ++ L ++ + ++SR ++ GV +P + +
Sbjct: 61 SLKEANEALLEAQIAMGDLAVRKASLSVKESIDVDIKSR--SVMGVSVPVTNVKMEERSI 118
Query: 120 NDLTGLARGGQQVQQCRAA--YVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVV 177
D G + +Q AA + ++I+ L+EL ++ + L E I+ T RRVNALE+++
Sbjct: 119 ID-RGYSFSDTTIQLDEAAKKFEESIKFLIELGEVEKTIFLLAEEIEATKRRVNALEHIM 177
Query: 178 KPRLENTITYIKGELDELEREDFFRLKKIQG 208
PR ENT YI L E+ERE+F RLK I+
Sbjct: 178 IPRFENTEKYIDMRLQEMERENFVRLKMIRS 208
>sp|Q1IWP5|VATD_DEIGD V-type ATP synthase subunit D OS=Deinococcus geothermalis (strain
DSM 11300) GN=atpD PE=3 SV=1
Length = 222
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 121/216 (56%), Gaps = 5/216 (2%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFA 68
+ PT + L K+ L AT G LLK+K DAL +F ++K+ + +E + V K + +
Sbjct: 5 ISPTRSALLASKASLKTATSGADLLKRKRDALIGEFFALVKDALAAREQLAGVSKGAYTS 64
Query: 69 LIEAK-YVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLAR 127
L AK + + E ++ + L + ++ ++ E+I GVK+P+ + + + + +
Sbjct: 65 LFGAKAWDSPEAVESLSLAGTSDYAVDMQI--ESIYGVKVPRIK-IPERQAAAAFSPINV 121
Query: 128 GGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITY 187
G + +Q + +E +V +A+ +T + E IK T+RRVNALE VV P + + I +
Sbjct: 122 GARTIQAA-TDFGTVLEAIVRVAATETKLRRIGEEIKKTSRRVNALEQVVIPGIRDDIRF 180
Query: 188 IKGELDELEREDFFRLKKIQGYKKREIERQLASSKQ 223
I+G LD+ ERE+ FRLKKI+ +RE ++ A + Q
Sbjct: 181 IRGVLDQREREESFRLKKIKAKLEREKNKENAQAGQ 216
>sp|Q6LYE5|VATD_METMP V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
S2 / LL) GN=atpD PE=3 SV=1
Length = 214
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 9/188 (4%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F +IL ++ + + + + LI A+ V G ++K
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKDLIMAQAVMGTLSVKEAS 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT--GLARGGQQVQQCRAA--YV 140
+N I + NI G+ +P FE K D++ G + G + AA +
Sbjct: 81 FA-AKNNDIDLDVDMRNIMGIDVPVFEI---SNVKRDISTRGYSPYGVSSKLDEAAKNFE 136
Query: 141 KAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDF 200
+A+EL+ ELA ++TS L + I TT RRVNALE VV P++ T YI L+E+ERE+F
Sbjct: 137 EALELITELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNETKKYIAMRLEEMERENF 196
Query: 201 FRLKKIQG 208
FRLK I+
Sbjct: 197 FRLKIIKA 204
>sp|A4FXD2|VATD_METM5 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=atpD PE=3 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F +IL ++ + + + + LI A+ V G ++K
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKDLIMAQAVMGTLSVKEAS 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT--GLARGGQQVQQCRAA--YV 140
+N +I + NI G+ +P FE K D++ G + G + AA +
Sbjct: 81 FA-AKNNNIDLDVDMRNIMGIDVPVFEI---SNVKRDISNRGYSPYGVSSKLDEAAKNFE 136
Query: 141 KAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDF 200
+A+EL+ ELA ++TS L + I TT RRVNALE VV P++ T YI L+E+ERE+F
Sbjct: 137 EALELIAELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNETKKYIAMRLEEMERENF 196
Query: 201 FRLKKIQG 208
FRLK I+
Sbjct: 197 FRLKIIKA 204
>sp|A6VFZ4|VATD_METM7 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=atpD PE=3 SV=1
Length = 214
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F +IL ++ + + + + LI A+ V G ++K
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDALSQAYKDLIMAQAVMGTLSVKEAS 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT--GLARGGQQVQQCRAA--YV 140
+N +I + NI G+ +P FE K D++ G + G + AA +
Sbjct: 81 FA-AKNDNIDLDVDMRNIMGIDVPVFEI---SNVKRDISNRGYSPYGVSSKLDEAAKNFE 136
Query: 141 KAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDF 200
+A+EL+ ELA ++TS L + I TT RRVNALE VV P++ T YI L+E+ERE+F
Sbjct: 137 EALELITELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNATKKYIAMRLEEMERENF 196
Query: 201 FRLKKIQG 208
FRLK I+
Sbjct: 197 FRLKIIKA 204
>sp|A9AAQ2|VATD_METM6 V-type ATP synthase subunit D OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=atpD PE=3 SV=1
Length = 214
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F +IL ++ + + + + LI A+ V G ++K
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILDQASGIRDKVNDAISQAYKDLIMAQAVMGTLSVKEAS 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT--GLARGGQQVQQCRAA--YV 140
+N +I + NI G+ +P FE K D++ G + G + AA +
Sbjct: 81 FA-AKNDNIDLDVDMRNIMGIDVPVFEI---SNVKRDISNRGYSPYGVSSKLDEAAKNFE 136
Query: 141 KAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDF 200
+A+EL+ ELA ++TS L + I TT RRVNALE VV P++ T YI L+E+ERE+F
Sbjct: 137 EALELITELAEIETSIKLLAQEIITTKRRVNALEYVVIPKMNATKKYIAMRLEEMERENF 196
Query: 201 FRLKKIQG 208
FRLK I+
Sbjct: 197 FRLKIIKA 204
>sp|A6UP56|VATD_METVS V-type ATP synthase subunit D OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=atpD PE=3 SV=1
Length = 214
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F +IL ++ + + + LI A+ + G ++K
Sbjct: 21 AEKGHKLLKQKRDALMMEFFEILNQASGIRDKVNVALSKAYKDLIMAQALMGTLSVKEAS 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT--GLARGGQQVQQCRAA--YV 140
+N +I++ NI G+ +P FE K D++ G + G + AA +
Sbjct: 81 FA-AKNDTIELDVDMRNIMGIGVPVFEL---QNVKRDISNRGYSPYGVSSKLDEAAKNFE 136
Query: 141 KAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDF 200
+A+EL+ ELA ++TS L + I TT RRVNALE VV PR+ T YI LDE+ERE+F
Sbjct: 137 EALELISELAEIETSIKLLAQEIITTKRRVNALEYVVIPRMNETKKYIGMRLDEMERENF 196
Query: 201 FRLKKIQG 208
FRLK I+
Sbjct: 197 FRLKLIKA 204
>sp|A6UT37|VATD_META3 V-type ATP synthase subunit D OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=atpD PE=3 SV=1
Length = 212
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 5/186 (2%)
Query: 26 ATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGE-NIKHIV 84
A +GH LLK+K DAL ++F +IL ++ + ++ + LI A+ V G +++ I
Sbjct: 21 AQKGHKLLKQKRDALIMEFFEILDQASGIRDKVNNALEKAYKDLIMAQAVMGTLSVQEIS 80
Query: 85 LENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAA--YVKA 142
+ +N +I + NI GV +P E T D G G + AA + +A
Sbjct: 81 YAS-KNDNIVLDLDTRNIMGVTVPVLEIENVKRTMAD-RGYGPYGVSSKLDEAAKEFEEA 138
Query: 143 IELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDFFR 202
+EL++ELA ++TS L E I TT RRVNALE VV PR+ YI LDE+ERE+FFR
Sbjct: 139 LELIMELAEIETSIKLLAEEIITTKRRVNALEYVVIPRMAEMQKYIGMRLDEMERENFFR 198
Query: 203 LKKIQG 208
LK I+
Sbjct: 199 LKLIKA 204
>sp|O06506|VATD_DESSY V-type ATP synthase subunit D OS=Desulfurococcus sp. (strain SY)
GN=atpD PE=3 SV=1
Length = 214
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 4/204 (1%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSS 66
L V PT L +K R+ A +GH LLK K DAL ++F I + + + MK++
Sbjct: 5 LNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALVMEFFTIYDEALQLRRELNLKMKEAF 64
Query: 67 FALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDL-TG 124
AL A+ G +K I L N +++R R N+ V +P E + +
Sbjct: 65 EALQMAEIDVGTLRLKEISLSVKPNREVEIRKR--NVMAVPVPLIEAESFKRNAGERGYA 122
Query: 125 LARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENT 184
+V + + ++L V LA ++ + L I+ T RRVNALE ++ PR+E T
Sbjct: 123 FVSSSAKVDLVAEKFEEVLDLAVRLAEVEETLKRLAREIEVTKRRVNALEYIIIPRMEAT 182
Query: 185 ITYIKGELDELEREDFFRLKKIQG 208
+ +IK LDE+ERE+FFRLK+++
Sbjct: 183 VKFIKQRLDEMERENFFRLKRVKA 206
>sp|C5A338|VATD_THEGJ V-type ATP synthase subunit D OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=atpD PE=3 SV=1
Length = 214
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSS 66
L V PT L +K R+ A +GH LLK K DAL ++F I + + + E M +
Sbjct: 5 LNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALIMEFFTIYDEALQLRRELNEKMGVAF 64
Query: 67 FALIEAKYVAGE-NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDG-ETKNDLTG 124
L A+ AG ++ L N ++++ R N+ GV +P E +G + K G
Sbjct: 65 ETLTRAQIEAGTLPLREAALAVKPNKEVEIKRR--NVMGVSVPLIE--AEGFKRKASERG 120
Query: 125 LA--RGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLE 182
A V + + ++L V LA ++ + L I+TT RRVNALE ++ PR+E
Sbjct: 121 YAFVSTSPFVDIAAEKFEEVLDLAVRLAEVEETLKRLAREIETTKRRVNALEYIIIPRME 180
Query: 183 NTITYIKGELDELEREDFFRLKKIQG 208
T+ +IK LDE+ERE+FFRLK+++
Sbjct: 181 ATVKFIKQRLDEMERENFFRLKRVKA 206
>sp|C6A5E6|VATD_THESM V-type ATP synthase subunit D OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=atpD PE=3 SV=1
Length = 214
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTK----ESMGEVM 62
L V PT L +K R+ A +GH +LK+K DAL ++F I + + + + E
Sbjct: 5 LKVKPTRMELLRLKRRIKLAEKGHKILKEKQDALIMEFFTIYDEALALRREVNQKIAEAF 64
Query: 63 KDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDL 122
+ A I+ V + I L N IK++ R NI GV +P E +G ++
Sbjct: 65 EQLRLAEIDVGIV---KLSEIALSVKSNKEIKIKRR--NIMGVPVPLIE--AEGFRRDPY 117
Query: 123 ---TGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 179
+V + + +EL+ LA ++ + L + I+ T RRVNALE ++ P
Sbjct: 118 ERGYAFVSTSPKVDVTAETFEEVLELVTRLAEIEETLKRLAKEIEKTKRRVNALEYIIIP 177
Query: 180 RLENTITYIKGELDELEREDFFRLKKIQG 208
R+ T+ YI LDE+ERE+FFRLK+++
Sbjct: 178 RMAETVKYISQHLDEMERENFFRLKRVKA 206
>sp|B0K5I8|VATD_THEPX V-type ATP synthase subunit D OS=Thermoanaerobacter sp. (strain
X514) GN=atpD PE=3 SV=1
Length = 209
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILK-NIVTTKESMGEVMKD-SS 66
V PT L +K RLV A RGH LLK K D L +F ++K N +E E++ S
Sbjct: 6 VNPTRMELTSLKKRLVTAKRGHKLLKDKQDELVKKFLDMVKQNRALREEVEAELIGAFKS 65
Query: 67 FALIEAKYVAGENIKHIVLEN--VQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT- 123
F + ++ A ++V E+ + +A + + ++ENI V +PK E + E+KN
Sbjct: 66 FTMARSQMSA-----NVVEESLMIPSAKVSINVKKENIMSVNVPKLEILQE-ESKNLYPY 119
Query: 124 GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
G A ++ + +++LA L+ + + + I+ T RRVNALE V+ P+LEN
Sbjct: 120 GFANTSAEMDAAIRTLATMLPKMLKLAELEKACQLMADEIEKTRRRVNALEYVLIPQLEN 179
Query: 184 TITYIKGELDELEREDFFRLKKIQ 207
TI YI +LDE ER RL KI+
Sbjct: 180 TIKYITMKLDENERSSRTRLMKIK 203
>sp|B0K8E6|VATD_THEP3 V-type ATP synthase subunit D OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=atpD PE=3
SV=1
Length = 209
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILK-NIVTTKESMGEVMKD-SS 66
V PT L +K RLV A RGH LLK K D L +F ++K N +E E++ S
Sbjct: 6 VNPTRMELTSLKKRLVTAKRGHKLLKDKQDELVKKFLDMVKQNRALREEVEAELIGAFKS 65
Query: 67 FALIEAKYVAGENIKHIVLEN--VQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT- 123
F + ++ A ++V E+ + +A + + ++ENI V +PK E + E+KN
Sbjct: 66 FTMARSQMSA-----NVVEESLMIPSAKVSINVKKENIMSVNVPKLEILQE-ESKNLYPY 119
Query: 124 GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
G A ++ + +++LA L+ + + + I+ T RRVNALE V+ P+LEN
Sbjct: 120 GFANTSAEMDAAIRTLATMLPKMLKLAELEKACQLMADEIEKTRRRVNALEYVLIPQLEN 179
Query: 184 TITYIKGELDELEREDFFRLKKIQ 207
TI YI +LDE ER RL KI+
Sbjct: 180 TIKYITMKLDENERSSRTRLMKIK 203
>sp|A3DHP2|VATD_CLOTH V-type ATP synthase subunit D OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1
Length = 222
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 7 LTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE-VMKDS 65
+ V PT L +K RL A RGH LLK K D L QF +++ +E + E +MK
Sbjct: 4 MRVNPTRMELTRLKKRLQVARRGHKLLKDKLDELMKQFLDLVRKNKELREKVEEMLMKAH 63
Query: 66 SFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT-- 123
LI ++ E ++ ++ Q+ S+ V + +NI V++P ++ T ++D+
Sbjct: 64 QDFLIARAVMSSEGLEAALMLPKQSISLDVST--QNIMSVEVPVLKFTTSSSDESDIYPY 121
Query: 124 GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLEN 183
G A ++ K + ++ELA ++ S L + I+ T RRVNALE V+ P+L
Sbjct: 122 GFASTSGELDGAILTLSKVLPYMLELAQMEKSSQLLAQEIEKTRRRVNALEYVMIPQLTE 181
Query: 184 TITYIKGELDELEREDFFRLKKIQ 207
TI YI +LDE ER + RL K++
Sbjct: 182 TIKYISMKLDENERGNITRLMKVK 205
>sp|Q9RWG6|VATD_DEIRA V-type ATP synthase subunit D OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=atpD PE=3 SV=1
Length = 224
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFA 68
+ PT + L K+ L A G LLK+K DAL +F ++K+ + +E + V K + +
Sbjct: 5 ISPTRSALLASKASLKTANGGADLLKRKRDALIGEFFALVKDALAAREQLSSVSKGAYTS 64
Query: 69 LIEAK-YVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLAR 127
L AK + + E ++ + L + ++ ++ E+I GVK+PK + + D + +
Sbjct: 65 LFGAKAWDSPEAVESLSLAGTGDYAVDMQI--ESIYGVKVPKIN-IPERAAQADFSPINV 121
Query: 128 GGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITY 187
G + +Q + +E +V++A+ +T + E IK T+RRVNALE VV P + + I +
Sbjct: 122 GARTIQASND-FGGVLEAIVKVAATETKLRRIGEEIKKTSRRVNALEQVVIPGIHDDIRF 180
Query: 188 IKGELDELEREDFFRLKKIQ 207
I+ LD+ ERE + KKI+
Sbjct: 181 IRSVLDQREREAGYTQKKIK 200
>sp|C1CXU5|VATD_DEIDV V-type ATP synthase subunit D OS=Deinococcus deserti (strain VCD115
/ DSM 17065 / LMG 22923) GN=atpD PE=3 SV=1
Length = 224
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFA 68
+ PT + L K+ L A+ G LLK+K DAL +F ++K+ + +E +G V K + +
Sbjct: 5 ISPTRSALLASKASLKTASGGADLLKRKRDALIGEFFALVKDALAAREQLGGVSKGAYTS 64
Query: 69 LIEAK-YVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLAR 127
L AK + + E ++ + L + ++ ++ E+I GVK+P+ +T N + +
Sbjct: 65 LFGAKAWDSPEAVESLSLAGSGDYAVNMQI--ESIYGVKVPRINIPERTQTTN-FSPINV 121
Query: 128 GGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITY 187
G + +Q + +E +V++A+ +T + E IK T+RRVNALE VV P +E+ I +
Sbjct: 122 GARTIQAA-TDFGGVMEAIVKVAATETKLRRIGEEIKKTSRRVNALEQVVIPGIEDDIRF 180
Query: 188 IKGELDELEREDFF 201
I+ LD+ ERE +
Sbjct: 181 IRSVLDQREREASY 194
>sp|Q184E4|VATD_CLOD6 V-type ATP synthase subunit D OS=Clostridium difficile (strain 630)
GN=atpD PE=3 SV=1
Length = 222
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 6/205 (2%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
RL + PT + +K L ATRGH LLK K D L QF +I++ +E + +
Sbjct: 3 RLNINPTRMEMTRLKKLLKTATRGHKLLKDKLDELMKQFLEIVRENKRLREEAENALDTA 62
Query: 66 SFALIEAKYVAG-ENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT- 123
I A+ V E + ++ Q+ S+ V +R NI V +P F++ T+ ++D+
Sbjct: 63 YKNFIIARAVMSQEYLGSALMMPKQSVSVDVSTR--NIMSVDVPVFDFKTEN-NQSDIYP 119
Query: 124 -GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLE 182
GLA ++ A+ A++ L+ LA + S L + I+ T RRVNALENV+ P
Sbjct: 120 YGLAFTSGELDSAMEAFSDAMQPLLRLAESEKSAQLLAQEIEKTRRRVNALENVMIPNYI 179
Query: 183 NTITYIKGELDELEREDFFRLKKIQ 207
TI YI +L+E ER RL K++
Sbjct: 180 ETIKYIAMKLEENERASTTRLMKVK 204
>sp|P43435|NTPD_ENTHA V-type sodium ATPase subunit D OS=Enterococcus hirae (strain ATCC
9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 /
NCIMB 6459 / NCDO 1258) GN=ntpD PE=1 SV=2
Length = 210
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 7/207 (3%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
RL V PT L +K +L ATRGH LLK K D L QF +++ ++++ + + +
Sbjct: 2 RLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTA 61
Query: 66 SFALIEAKYVAGEN-IKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLT- 123
+ AK E I ++ +N SI V + NI VK+P + D ET N+
Sbjct: 62 MKDFVLAKSTVEEAFIDELLALPAENVSISVVEK--NIMSVKVPLMNFQYD-ETLNETPL 118
Query: 124 --GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRL 181
G ++ + + + + L++LA ++ + + E I+ T RRVNALE + P+L
Sbjct: 119 EYGYLHSNAELDRSIDGFTQLLPKLLKLAEVEKTCQLMAEEIEKTRRRVNALEYMTIPQL 178
Query: 182 ENTITYIKGELDELEREDFFRLKKIQG 208
E TI YIK +L+E ER + RL K++
Sbjct: 179 EETIYYIKMKLEENERAEVTRLIKVKN 205
>sp|O27034|VATD_METTH V-type ATP synthase subunit D OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=atpD PE=3 SV=1
Length = 213
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 119/214 (55%), Gaps = 14/214 (6%)
Query: 1 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGE 60
MAQ + PT L +K R A +G++LLK+K +AL ++F IL+ + ++E + E
Sbjct: 1 MAQEMIEGINPTRMELLKLKQREKLAVKGYSLLKEKRNALIMEFFNILERVKGSREKVEE 60
Query: 61 VMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQE------NIAGVKIPKFEYFT 114
+K++ L EA+ + G+ V+ A++ VR E +I GV +P +
Sbjct: 61 HLKEAFSDLTEAQVLMGDT-------AVERAAMSVRESVEVDIDSRSIMGVVVPVVDARA 113
Query: 115 DGETKNDL-TGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNAL 173
T + GL ++ + + +++ L++EL ++ + L I++T RRVNAL
Sbjct: 114 TQRTVVERGYGLVDTSVKLDEAARKFEESLALIIELGEIEKTIRLLAGEIESTKRRVNAL 173
Query: 174 ENVVKPRLENTITYIKGELDELEREDFFRLKKIQ 207
E+++ PRL+NT+ YI+ L+E+ERE+F RLK I+
Sbjct: 174 EHIIIPRLKNTVKYIEMRLEEMERENFVRLKMIK 207
>sp|A7IAU6|VATD_METB6 V-type ATP synthase subunit D OS=Methanoregula boonei (strain 6A8)
GN=atpD PE=3 SV=1
Length = 209
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 11 PTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALI 70
PT + L +K ++ + RG+ +LK K D L ++F +IL K+S GE+++ A +
Sbjct: 8 PTRSELINLKRKIQLSQRGYKILKMKRDGLIMEFFKILSE---AKDSRGELLRRYKHA-V 63
Query: 71 EAKYVAGE-----NIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDL-TG 124
E VA +K + I ++S+ NI GV +P+ E +T D G
Sbjct: 64 EMMAVANTVEGALGVKAAAFSVKETPEITLKSK--NIMGVVVPEIESSKVKKTLADRGYG 121
Query: 125 LARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENT 184
+ + + +++ +E ++E A ++T+ L + I+ T RRVNALE V P L
Sbjct: 122 VLGTSPVIDETASSFEDLVEAIIESAEIETTMKRLLDEIEKTKRRVNALEFKVIPELTEA 181
Query: 185 ITYIKGELDELEREDFFRLKKIQG 208
+IK LDE+ERE+ FR+KKI+
Sbjct: 182 RDFIKMRLDEMEREELFRMKKIKA 205
>sp|O29099|VATD_ARCFU V-type ATP synthase subunit D OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=atpD PE=3 SV=1
Length = 209
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMK----- 63
V PT L ++ R+ ATRGHALLK K D L ++FRQ+L+ KE +G +++
Sbjct: 4 VQPTRMELIKLRRRIKMATRGHALLKMKRDGLIMEFRQLLEE---AKEVIGGMVQKYEKA 60
Query: 64 DSSFALIEAKYVAG-ENIKHIVLENVQNASIKVRSRQENIAGVKIP--KFEYFTDGETKN 120
S AL A V G ++ I L Q + +++NI GV +P K E T+
Sbjct: 61 QSKLAL--AIAVDGIVAVRSIALSCCQIPP-EFSMKRKNIMGVVVPVIKREPIRKKPTER 117
Query: 121 DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPR 180
G+ +V + AY + ++ ++E+A ++T+ L E I+ T RRVNALE V P
Sbjct: 118 GY-GILSTSTRVDEAVEAYEELVDAVLEVAEIETTLRKLIEEIERTKRRVNALEYRVIPT 176
Query: 181 LENTITYIKGELDELEREDFFR 202
+E +I +L+E++RE+ R
Sbjct: 177 MEELAKFISFKLEEMDRENIIR 198
>sp|A0PZC8|VATD_CLONN V-type ATP synthase subunit D OS=Clostridium novyi (strain NT)
GN=atpD PE=3 SV=1
Length = 216
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDS 65
RL V PT L +K RL ATRGH LLK K D L +F ++K ++ + E++K+S
Sbjct: 3 RLNVNPTRMELTRLKKRLTTATRGHKLLKDKQDELMRRFIDLVKYNNELRKDVEEMIKNS 62
Query: 66 SFALIEAK-YVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEY---FTDGETKND 121
+ A+ ++ E ++ ++ + S+ V + NI V +P+ ++ D
Sbjct: 63 LKDFVMARALMSSEILEEAIMYPKEKISLDVNIK--NIMSVNVPEMKFKRLLEDDNGSIY 120
Query: 122 LTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRL 181
G + ++ + L+ELA ++ S + + I+ T RRVNALE + P+L
Sbjct: 121 PYGYSNTSAELDDAIEKLYSILPKLLELAEVEKSTQLMADEIEKTRRRVNALEYMTIPQL 180
Query: 182 ENTITYIKGELDELEREDFFRLKKIQGYKKREIE 215
E TI YI+ +L+E ER RL K++ ++E E
Sbjct: 181 EETIKYIQMKLEENERGALTRLMKVKTMLEKEQE 214
>sp|Q834X7|VATD_ENTFA V-type ATP synthase subunit D OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=atpD PE=3 SV=1
Length = 211
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKD- 64
RL V PT L +K +L ATRGH LLK K D L +F ++K + + + + D
Sbjct: 3 RLNVNPTRMELSRLKKQLTTATRGHKLLKDKQDELMRRFIALVKENNELRIQVEQEVTDA 62
Query: 65 -SSFALIEAKYVAG--ENIKHIVLENVQNASIKVRSRQENIAGVKIPK--FEYFTDGETK 119
S+F L A E + I E V+ I ++NI V +PK F+Y +
Sbjct: 63 LSNFVLANATLNEAFIEELVAIPAEKVELEII-----EQNILSVPVPKMIFDYDESVQEA 117
Query: 120 NDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 179
G ++ Q A + L+ LA+++ + L + I+ T RRVNALE + P
Sbjct: 118 PLDYGYVNSNSELDQAFAKISSILPKLLALANVEKTCQLLSKEIEKTRRRVNALEYMTIP 177
Query: 180 RLENTITYIKGELDELEREDFFRLKKIQGYKK 211
+LE TI YI+ +L+E ER + RL KI+ K
Sbjct: 178 QLEETIYYIQMKLEENERGEITRLIKIKSMNK 209
>sp|O87880|VATD_THET8 V-type ATP synthase subunit D OS=Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579) GN=atpD PE=1 SV=2
Length = 223
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 18/207 (8%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFA 68
V PT L + +L A +G LLKKK DAL +F +++ + ++++ + K++ A
Sbjct: 4 VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63
Query: 69 LIE------AKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEY-FTDGETKND 121
L+ + VAG + LE V+ + EN+ G K+P+ + F DG
Sbjct: 64 LLLAQAFDGPEVVAGAALGVPPLEGVE-------AEVENVWGSKVPRLKATFPDGAL--- 113
Query: 122 LTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRL 181
L+ + ++ RA + + E L+ +A+ +T + E IK T RRVNALE VV P +
Sbjct: 114 LSPVGTPAYTLEASRA-FRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVIPGI 172
Query: 182 ENTITYIKGELDELEREDFFRLKKIQG 208
I +I+ L++ ERED FRLK+I+G
Sbjct: 173 RAQIRFIQQVLEQREREDTFRLKRIKG 199
>sp|Q72J74|VATD_THET2 V-type ATP synthase subunit D OS=Thermus thermophilus (strain HB27
/ ATCC BAA-163 / DSM 7039) GN=atpD PE=3 SV=1
Length = 223
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 18/207 (8%)
Query: 9 VVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFA 68
V PT L + +L A +G LLKKK DAL +F +++ + ++++ + K++ A
Sbjct: 4 VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63
Query: 69 LIE------AKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEY-FTDGETKND 121
L+ + VAG + LE V+ + EN+ G K+P+ + F DG
Sbjct: 64 LLLAQAFDGPEVVAGAALGVPPLEGVE-------AEVENVWGSKVPRLKATFPDGAL--- 113
Query: 122 LTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRL 181
L+ + ++ RA + + E L+ +A+ +T + E IK T RRVNALE VV P +
Sbjct: 114 LSPVGTPAYTLEASRA-FRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVIPGI 172
Query: 182 ENTITYIKGELDELEREDFFRLKKIQG 208
I +I+ L++ ERED FRLK+I+G
Sbjct: 173 RAQIRFIQQVLEQREREDTFRLKRIKG 199
>sp|C1FTN5|VATD_CLOBJ V-type ATP synthase subunit D OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=atpD PE=3 SV=1
Length = 216
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 10/209 (4%)
Query: 6 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQF-RQILKNIVTTKESMGEVMKD 64
+L V PT L +K RL ATRGH LLK K D L +F I KN K+ E+ +
Sbjct: 2 KLNVNPTRMELTKLKKRLTTATRGHKLLKDKQDELMRRFIGMIKKNNELRKDVEKEL--E 59
Query: 65 SSFA--LIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYF--TDGETKN 120
SF L+ + ++ E ++ V SI V +++NI V +P F++ +G+ +
Sbjct: 60 GSFKDFLMASAVMSPEFLEEAV--AYPKESISVDVKKQNIMSVNVPVFDFKRKLEGDKGS 117
Query: 121 DLT-GLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 179
G A ++ + L+ELA ++ + + + I+ T RRVNALE + P
Sbjct: 118 IFPYGFANTSAELDGAIEKLYGILPKLLELAKVEKACQLMADEIEKTRRRVNALEYMTIP 177
Query: 180 RLENTITYIKGELDELEREDFFRLKKIQG 208
+LE TI +I+ +LDE ER RL KI+
Sbjct: 178 QLEETIKFIQMKLDENERSTVTRLMKIKS 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,040,945
Number of Sequences: 539616
Number of extensions: 3017879
Number of successful extensions: 13214
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 12975
Number of HSP's gapped (non-prelim): 232
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)