Query 025039
Match_columns 259
No_of_seqs 219 out of 2929
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 18:58:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pxx_A Uncharacterized protein 99.9 6.2E-27 2.1E-31 190.4 16.6 197 22-220 3-202 (215)
2 2gb4_A Thiopurine S-methyltran 99.8 2.6E-21 9E-26 161.9 10.6 141 23-178 30-192 (252)
3 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.6E-19 5.6E-24 151.8 13.7 118 48-180 60-181 (261)
4 2kw5_A SLR1183 protein; struct 99.8 5.9E-19 2E-23 142.2 12.8 135 28-182 1-136 (202)
5 4hg2_A Methyltransferase type 99.8 1.5E-19 5E-24 151.7 9.2 113 46-181 27-139 (257)
6 2xvm_A Tellurite resistance pr 99.8 8.9E-19 3.1E-23 140.4 13.4 133 23-178 5-137 (199)
7 1pjz_A Thiopurine S-methyltran 99.8 1.7E-19 5.7E-24 146.1 9.1 116 48-177 11-140 (203)
8 3sm3_A SAM-dependent methyltra 99.8 4.1E-19 1.4E-23 146.0 10.6 138 25-180 2-144 (235)
9 3lcc_A Putative methyl chlorid 99.8 6.3E-19 2.2E-23 145.5 10.2 140 25-180 32-174 (235)
10 1vl5_A Unknown conserved prote 99.8 1.5E-18 5.2E-23 145.3 12.0 108 56-179 35-142 (260)
11 3ofk_A Nodulation protein S; N 99.8 2.8E-18 9.6E-23 139.6 12.3 141 24-180 12-157 (216)
12 3pfg_A N-methyltransferase; N, 99.8 2.3E-18 7.7E-23 144.5 10.9 135 26-180 19-154 (263)
13 3l8d_A Methyltransferase; stru 99.8 1.9E-18 6.3E-23 142.9 10.1 116 46-180 41-156 (242)
14 1ve3_A Hypothetical protein PH 99.8 6.9E-18 2.4E-22 138.0 13.2 122 45-181 25-146 (227)
15 2ex4_A Adrenal gland protein A 99.8 3.2E-18 1.1E-22 141.8 10.7 110 58-180 79-188 (241)
16 2p7i_A Hypothetical protein; p 99.8 2.5E-18 8.7E-23 142.2 10.0 135 25-181 9-145 (250)
17 3f4k_A Putative methyltransfer 99.8 8.5E-18 2.9E-22 140.3 13.0 107 56-178 44-151 (257)
18 3g5l_A Putative S-adenosylmeth 99.8 4E-18 1.4E-22 142.1 11.0 104 58-179 44-147 (253)
19 1xxl_A YCGJ protein; structura 99.8 5.2E-18 1.8E-22 140.5 11.4 109 56-180 19-127 (239)
20 4htf_A S-adenosylmethionine-de 99.8 4.7E-18 1.6E-22 144.2 11.3 116 48-179 58-175 (285)
21 3dh0_A SAM dependent methyltra 99.7 5.9E-18 2E-22 137.9 11.3 110 56-180 35-146 (219)
22 2o57_A Putative sarcosine dime 99.7 8.7E-18 3E-22 143.3 11.9 109 55-179 79-189 (297)
23 3mgg_A Methyltransferase; NYSG 99.7 7.9E-18 2.7E-22 142.1 11.2 118 46-178 23-143 (276)
24 3jwh_A HEN1; methyltransferase 99.7 2.2E-17 7.7E-22 134.5 13.5 109 57-178 28-142 (217)
25 2a14_A Indolethylamine N-methy 99.7 2.4E-18 8.2E-23 144.7 7.9 143 23-178 15-198 (263)
26 3hnr_A Probable methyltransfer 99.7 1.9E-17 6.5E-22 135.0 12.9 103 58-179 45-147 (220)
27 3h2b_A SAM-dependent methyltra 99.7 1.3E-17 4.4E-22 134.4 11.7 104 59-181 42-145 (203)
28 3ujc_A Phosphoethanolamine N-m 99.7 1.8E-17 6.2E-22 138.6 13.0 109 56-180 53-162 (266)
29 3mti_A RRNA methylase; SAM-dep 99.7 2.2E-17 7.6E-22 131.1 12.8 124 48-179 12-137 (185)
30 3bus_A REBM, methyltransferase 99.7 1.2E-17 4.1E-22 140.6 11.7 109 56-179 59-168 (273)
31 3g2m_A PCZA361.24; SAM-depende 99.7 1.4E-17 4.7E-22 142.5 12.1 119 50-183 74-196 (299)
32 3kkz_A Uncharacterized protein 99.7 1.5E-17 5.3E-22 139.8 12.1 107 56-178 44-151 (267)
33 3m70_A Tellurite resistance pr 99.7 2.2E-17 7.4E-22 140.2 13.0 105 58-178 120-224 (286)
34 1nkv_A Hypothetical protein YJ 99.7 1.9E-17 6.6E-22 138.0 12.2 107 56-178 34-141 (256)
35 3dtn_A Putative methyltransfer 99.7 3.2E-17 1.1E-21 134.9 13.1 109 56-180 42-151 (234)
36 3jwg_A HEN1, methyltransferase 99.7 3.4E-17 1.2E-21 133.5 13.1 109 57-178 28-142 (219)
37 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.8E-17 6.3E-22 137.9 11.5 107 57-178 92-198 (254)
38 2yqz_A Hypothetical protein TT 99.7 3.6E-17 1.2E-21 136.7 12.6 105 55-176 36-140 (263)
39 3dlc_A Putative S-adenosyl-L-m 99.7 1.8E-17 6.2E-22 134.5 10.4 105 59-178 44-149 (219)
40 3ou2_A SAM-dependent methyltra 99.7 4.9E-17 1.7E-21 132.0 12.9 114 48-181 37-150 (218)
41 1y8c_A S-adenosylmethionine-de 99.7 4.2E-17 1.4E-21 134.7 12.7 118 48-180 27-145 (246)
42 3lec_A NADB-rossmann superfami 99.7 1.1E-16 3.6E-21 131.3 14.8 151 51-218 14-166 (230)
43 2p8j_A S-adenosylmethionine-de 99.7 4.6E-17 1.6E-21 131.5 12.3 113 55-182 20-133 (209)
44 3ggd_A SAM-dependent methyltra 99.7 1.5E-17 5.1E-22 138.0 9.6 112 53-181 51-167 (245)
45 3e23_A Uncharacterized protein 99.7 3.4E-17 1.2E-21 132.8 11.5 111 47-179 33-143 (211)
46 3cgg_A SAM-dependent methyltra 99.7 4.6E-17 1.6E-21 129.6 12.0 112 50-180 38-150 (195)
47 3p9n_A Possible methyltransfer 99.7 4.2E-17 1.4E-21 130.2 11.8 110 57-180 43-156 (189)
48 3thr_A Glycine N-methyltransfe 99.7 2E-17 6.8E-22 140.8 9.7 140 26-179 28-177 (293)
49 3evz_A Methyltransferase; NYSG 99.7 1.6E-16 5.5E-21 130.5 14.8 127 52-180 49-182 (230)
50 1ri5_A MRNA capping enzyme; me 99.7 8.5E-17 2.9E-21 136.8 13.4 117 54-181 60-178 (298)
51 3kr9_A SAM-dependent methyltra 99.7 1.8E-16 6.1E-21 129.7 14.6 149 52-218 9-160 (225)
52 2i62_A Nicotinamide N-methyltr 99.7 2.6E-17 8.9E-22 137.7 9.8 145 23-178 16-199 (265)
53 3vc1_A Geranyl diphosphate 2-C 99.7 4.9E-17 1.7E-21 139.9 11.8 107 56-179 115-223 (312)
54 2gs9_A Hypothetical protein TT 99.7 4.9E-17 1.7E-21 131.7 11.1 109 50-181 28-136 (211)
55 3gnl_A Uncharacterized protein 99.7 1.4E-16 4.6E-21 131.7 13.5 150 51-217 14-165 (244)
56 3bxo_A N,N-dimethyltransferase 99.7 2.3E-17 7.9E-22 136.0 8.8 136 26-181 9-145 (239)
57 3ocj_A Putative exported prote 99.7 4E-17 1.4E-21 140.0 10.3 119 50-181 110-231 (305)
58 3d2l_A SAM-dependent methyltra 99.7 1.3E-16 4.6E-21 131.7 12.9 132 26-180 8-140 (243)
59 1wzn_A SAM-dependent methyltra 99.7 7.3E-17 2.5E-21 134.3 11.0 136 26-178 9-146 (252)
60 3bkw_A MLL3908 protein, S-aden 99.7 9.5E-17 3.2E-21 132.6 11.4 105 57-179 42-146 (243)
61 3g5t_A Trans-aconitate 3-methy 99.7 6.1E-17 2.1E-21 138.4 10.5 117 47-179 24-151 (299)
62 3hem_A Cyclopropane-fatty-acyl 99.7 1.4E-16 4.7E-21 136.4 12.0 116 56-181 70-187 (302)
63 3ccf_A Cyclopropane-fatty-acyl 99.7 1.1E-16 3.9E-21 135.3 11.4 103 56-180 55-157 (279)
64 2ift_A Putative methylase HI07 99.7 1.7E-16 6E-21 128.1 11.9 108 58-181 53-167 (201)
65 2vdw_A Vaccinia virus capping 99.7 4.7E-17 1.6E-21 139.6 8.9 113 58-182 48-174 (302)
66 2avn_A Ubiquinone/menaquinone 99.7 5.9E-17 2E-21 135.8 9.4 131 26-180 25-155 (260)
67 2frn_A Hypothetical protein PH 99.7 2.1E-16 7.3E-21 133.9 12.7 121 40-180 107-228 (278)
68 3g07_A 7SK snRNA methylphospha 99.7 7.1E-17 2.4E-21 137.8 9.8 112 57-177 45-220 (292)
69 1zx0_A Guanidinoacetate N-meth 99.7 4.2E-17 1.4E-21 134.7 8.1 112 56-179 58-172 (236)
70 3i9f_A Putative type 11 methyl 99.7 1.9E-16 6.4E-21 124.0 11.2 101 56-180 15-115 (170)
71 3grz_A L11 mtase, ribosomal pr 99.7 2E-16 6.8E-21 127.7 11.4 113 48-180 50-162 (205)
72 3dli_A Methyltransferase; PSI- 99.7 5.9E-17 2E-21 134.1 8.3 105 55-181 38-144 (240)
73 3gu3_A Methyltransferase; alph 99.7 2.1E-16 7.3E-21 134.1 11.7 107 56-179 20-128 (284)
74 4fsd_A Arsenic methyltransfera 99.7 4.4E-17 1.5E-21 144.2 7.4 108 56-178 81-204 (383)
75 2b3t_A Protein methyltransfera 99.7 2.1E-16 7.2E-21 133.7 11.2 170 26-196 75-258 (276)
76 3e05_A Precorrin-6Y C5,15-meth 99.7 4.5E-16 1.5E-20 125.6 12.5 106 56-179 38-144 (204)
77 3ege_A Putative methyltransfer 99.7 5.9E-17 2E-21 135.9 7.4 103 57-182 33-135 (261)
78 3eey_A Putative rRNA methylase 99.7 4.6E-16 1.6E-20 124.7 11.8 123 51-179 15-141 (197)
79 3bgv_A MRNA CAP guanine-N7 met 99.7 7.3E-16 2.5E-20 132.6 13.7 120 51-181 27-159 (313)
80 2fhp_A Methylase, putative; al 99.7 4.2E-16 1.5E-20 123.6 11.3 110 57-182 43-159 (187)
81 1kpg_A CFA synthase;, cyclopro 99.7 3.5E-16 1.2E-20 132.7 11.5 108 56-180 62-171 (287)
82 2p35_A Trans-aconitate 2-methy 99.7 3.8E-16 1.3E-20 130.3 11.4 102 57-179 32-134 (259)
83 2fk8_A Methoxy mycolic acid sy 99.7 4.1E-16 1.4E-20 134.3 11.9 109 56-181 88-198 (318)
84 2fpo_A Methylase YHHF; structu 99.7 4.6E-16 1.6E-20 125.7 11.5 107 58-180 54-163 (202)
85 3iv6_A Putative Zn-dependent a 99.7 3.6E-16 1.2E-20 130.9 10.6 104 56-177 43-148 (261)
86 3fpf_A Mtnas, putative unchara 99.7 5.7E-16 1.9E-20 131.3 11.5 103 55-178 119-223 (298)
87 3tma_A Methyltransferase; thum 99.7 9.3E-16 3.2E-20 134.3 13.2 151 56-215 201-353 (354)
88 3orh_A Guanidinoacetate N-meth 99.7 2.2E-16 7.4E-21 130.7 8.7 112 55-177 57-170 (236)
89 1dus_A MJ0882; hypothetical pr 99.7 1.1E-15 3.9E-20 121.4 12.5 109 57-181 51-161 (194)
90 3lbf_A Protein-L-isoaspartate 99.7 1.5E-15 5.2E-20 122.9 13.5 102 56-179 75-176 (210)
91 3fzg_A 16S rRNA methylase; met 99.7 6.9E-16 2.4E-20 121.9 10.7 146 46-209 37-194 (200)
92 2g72_A Phenylethanolamine N-me 99.6 5E-16 1.7E-20 132.1 10.6 110 57-177 70-215 (289)
93 2esr_A Methyltransferase; stru 99.6 1.6E-15 5.6E-20 119.4 12.8 111 56-182 29-143 (177)
94 3njr_A Precorrin-6Y methylase; 99.6 1.6E-15 5.4E-20 122.8 12.9 104 56-180 53-157 (204)
95 3dmg_A Probable ribosomal RNA 99.6 1.2E-15 4.1E-20 134.7 13.1 111 58-180 233-343 (381)
96 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.1E-15 3.9E-20 124.2 12.0 114 57-179 40-158 (214)
97 1jsx_A Glucose-inhibited divis 99.6 3.9E-15 1.3E-19 120.1 14.3 101 58-178 65-166 (207)
98 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.5E-16 1.2E-20 128.0 7.8 113 58-179 34-152 (218)
99 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.2E-15 4.1E-20 126.2 11.0 115 56-179 44-170 (235)
100 1xdz_A Methyltransferase GIDB; 99.6 5.5E-16 1.9E-20 128.4 8.9 102 57-177 69-174 (240)
101 1ws6_A Methyltransferase; stru 99.6 3.8E-16 1.3E-20 122.0 7.5 108 56-182 39-152 (171)
102 2fca_A TRNA (guanine-N(7)-)-me 99.6 9.8E-16 3.3E-20 124.8 10.1 113 58-179 38-155 (213)
103 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.6E-15 5.6E-20 119.2 11.0 105 56-180 23-130 (178)
104 3lpm_A Putative methyltransfer 99.6 1.9E-15 6.5E-20 126.6 11.7 123 56-178 46-177 (259)
105 3q7e_A Protein arginine N-meth 99.6 1.1E-15 3.7E-20 133.7 10.5 107 56-175 64-171 (349)
106 2fyt_A Protein arginine N-meth 99.6 2E-15 6.9E-20 131.5 11.8 106 56-174 62-168 (340)
107 4dzr_A Protein-(glutamine-N5) 99.6 1.2E-16 4.1E-21 129.2 3.2 121 57-179 29-166 (215)
108 1vlm_A SAM-dependent methyltra 99.6 9.3E-16 3.2E-20 125.2 8.3 102 51-180 41-142 (219)
109 3dp7_A SAM-dependent methyltra 99.6 4.7E-15 1.6E-19 130.3 13.3 109 57-180 178-290 (363)
110 3g89_A Ribosomal RNA small sub 99.6 1.5E-15 5.1E-20 126.7 9.6 103 57-178 79-185 (249)
111 3r0q_C Probable protein argini 99.6 8.5E-16 2.9E-20 135.6 8.2 106 56-175 61-167 (376)
112 1vbf_A 231AA long hypothetical 99.6 8.8E-15 3E-19 120.1 13.7 101 56-180 68-168 (231)
113 1nt2_A Fibrillarin-like PRE-rR 99.6 6.6E-15 2.2E-19 119.7 12.4 102 56-177 55-161 (210)
114 2aot_A HMT, histamine N-methyl 99.6 1.1E-15 3.6E-20 130.4 7.7 109 57-180 51-175 (292)
115 3bkx_A SAM-dependent methyltra 99.6 2.1E-15 7.3E-20 126.9 9.4 111 56-181 41-163 (275)
116 1l3i_A Precorrin-6Y methyltran 99.6 7.8E-15 2.7E-19 116.3 11.6 105 56-180 31-137 (192)
117 2nxc_A L11 mtase, ribosomal pr 99.6 3.2E-15 1.1E-19 125.0 9.7 112 48-180 110-221 (254)
118 1af7_A Chemotaxis receptor met 99.6 3E-15 1E-19 126.3 9.4 105 58-175 105-250 (274)
119 2yxe_A Protein-L-isoaspartate 99.6 1.1E-14 3.8E-19 118.2 12.5 104 56-180 75-180 (215)
120 4df3_A Fibrillarin-like rRNA/T 99.6 1.2E-14 4.3E-19 119.3 12.7 118 41-177 55-182 (233)
121 2pjd_A Ribosomal RNA small sub 99.6 6.3E-15 2.2E-19 128.5 11.6 110 58-180 196-306 (343)
122 3cc8_A Putative methyltransfer 99.6 4.1E-15 1.4E-19 121.4 9.7 101 57-180 31-133 (230)
123 4dcm_A Ribosomal RNA large sub 99.6 5.9E-15 2E-19 130.1 11.2 113 58-181 222-338 (375)
124 2r3s_A Uncharacterized protein 99.6 8.6E-15 2.9E-19 126.8 11.9 110 57-181 164-275 (335)
125 3gdh_A Trimethylguanosine synt 99.6 7.2E-17 2.5E-21 133.6 -1.2 102 58-176 78-180 (241)
126 3i53_A O-methyltransferase; CO 99.6 1.1E-14 3.9E-19 126.2 12.6 107 58-180 169-277 (332)
127 1ixk_A Methyltransferase; open 99.6 8.8E-15 3E-19 126.1 11.7 125 56-180 116-249 (315)
128 3e8s_A Putative SAM dependent 99.6 2.2E-15 7.6E-20 122.7 7.6 102 58-182 52-157 (227)
129 3htx_A HEN1; HEN1, small RNA m 99.6 9.5E-15 3.3E-19 137.4 12.6 108 58-179 721-836 (950)
130 1g6q_1 HnRNP arginine N-methyl 99.6 6.3E-15 2.1E-19 127.7 10.1 105 57-174 37-142 (328)
131 3uwp_A Histone-lysine N-methyl 99.6 9.8E-15 3.4E-19 128.3 11.2 110 55-180 170-291 (438)
132 1x19_A CRTF-related protein; m 99.6 1.9E-14 6.3E-19 126.2 13.0 110 56-181 188-299 (359)
133 3a27_A TYW2, uncharacterized p 99.6 1.5E-14 5.2E-19 122.1 12.0 107 54-180 115-222 (272)
134 1qzz_A RDMB, aclacinomycin-10- 99.6 1.7E-14 5.7E-19 127.0 12.7 107 56-178 180-288 (374)
135 1o9g_A RRNA methyltransferase; 99.6 1.1E-14 3.6E-19 121.3 10.7 117 58-180 51-217 (250)
136 2ozv_A Hypothetical protein AT 99.6 1.3E-14 4.4E-19 121.7 11.2 123 56-178 34-171 (260)
137 2pbf_A Protein-L-isoaspartate 99.6 1.5E-14 5.3E-19 118.4 11.3 109 50-179 72-195 (227)
138 3gwz_A MMCR; methyltransferase 99.6 2.7E-14 9.1E-19 125.7 13.6 108 57-180 201-310 (369)
139 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.6E-14 5.6E-19 120.0 11.6 113 56-177 47-173 (246)
140 1i1n_A Protein-L-isoaspartate 99.6 2E-14 6.9E-19 117.6 11.8 109 50-179 69-184 (226)
141 3ntv_A MW1564 protein; rossman 99.6 8.5E-15 2.9E-19 120.7 9.4 103 57-177 70-176 (232)
142 3mb5_A SAM-dependent methyltra 99.6 9.1E-15 3.1E-19 121.9 9.5 104 56-180 91-197 (255)
143 3m33_A Uncharacterized protein 99.6 1.1E-14 3.7E-19 119.5 9.8 99 50-175 40-140 (226)
144 2qe6_A Uncharacterized protein 99.6 1.8E-14 6.1E-19 121.8 11.2 108 58-180 77-199 (274)
145 2igt_A SAM dependent methyltra 99.6 1.1E-14 3.9E-19 126.2 10.0 117 57-179 152-274 (332)
146 1jg1_A PIMT;, protein-L-isoasp 99.6 3.7E-14 1.3E-18 116.9 12.7 103 56-180 89-192 (235)
147 1dl5_A Protein-L-isoaspartate 99.6 1.9E-14 6.4E-19 124.1 11.2 102 56-178 73-176 (317)
148 3mq2_A 16S rRNA methyltransfer 99.5 3.3E-15 1.1E-19 121.7 5.8 111 56-177 25-140 (218)
149 2y1w_A Histone-arginine methyl 99.5 1.5E-14 5.1E-19 126.4 10.2 104 57-175 49-153 (348)
150 3mcz_A O-methyltransferase; ad 99.5 2.4E-14 8.3E-19 124.9 11.4 107 59-179 180-289 (352)
151 1fbn_A MJ fibrillarin homologu 99.5 4.9E-14 1.7E-18 115.9 12.5 101 56-176 72-177 (230)
152 3k6r_A Putative transferase PH 99.5 2.6E-14 8.9E-19 120.6 11.1 110 50-179 117-227 (278)
153 2yxd_A Probable cobalt-precorr 99.5 3.3E-14 1.1E-18 111.8 11.0 103 56-181 33-135 (183)
154 1p91_A Ribosomal RNA large sub 99.5 2.7E-14 9.1E-19 119.9 11.1 108 48-182 74-183 (269)
155 3tfw_A Putative O-methyltransf 99.5 2.5E-14 8.5E-19 119.1 10.6 104 57-178 62-171 (248)
156 1tw3_A COMT, carminomycin 4-O- 99.5 3.4E-14 1.2E-18 124.4 12.0 107 57-179 182-290 (360)
157 3p2e_A 16S rRNA methylase; met 99.5 1.6E-14 5.5E-19 118.6 9.0 112 56-177 22-139 (225)
158 4hc4_A Protein arginine N-meth 99.5 1.6E-14 5.5E-19 126.8 9.5 103 58-174 83-186 (376)
159 4e2x_A TCAB9; kijanose, tetron 99.5 1.7E-15 5.9E-20 135.3 3.1 103 57-179 106-210 (416)
160 2ipx_A RRNA 2'-O-methyltransfe 99.5 5.1E-14 1.7E-18 115.9 11.8 104 56-178 75-183 (233)
161 2as0_A Hypothetical protein PH 99.5 3E-14 1E-18 126.5 10.9 135 41-181 200-339 (396)
162 3dr5_A Putative O-methyltransf 99.5 1.1E-14 3.8E-19 119.3 7.5 101 59-177 57-163 (221)
163 3u81_A Catechol O-methyltransf 99.5 3E-14 1E-18 116.4 10.1 108 57-180 57-173 (221)
164 1nv8_A HEMK protein; class I a 99.5 9.9E-14 3.4E-18 117.8 13.6 116 58-176 123-248 (284)
165 2b78_A Hypothetical protein SM 99.5 2.9E-14 1E-18 126.1 10.5 135 42-182 196-336 (385)
166 3b3j_A Histone-arginine methyl 99.5 8.8E-15 3E-19 132.8 7.3 104 57-175 157-261 (480)
167 2pwy_A TRNA (adenine-N(1)-)-me 99.5 2.4E-14 8E-19 119.3 9.2 105 56-180 94-201 (258)
168 3ajd_A Putative methyltransfer 99.5 2.7E-14 9.3E-19 120.7 9.5 125 56-180 81-214 (274)
169 3tm4_A TRNA (guanine N2-)-meth 99.5 1.5E-13 5.2E-18 121.1 14.6 134 56-199 215-350 (373)
170 1yb2_A Hypothetical protein TA 99.5 2.1E-14 7.3E-19 121.3 8.8 104 56-180 108-214 (275)
171 4azs_A Methyltransferase WBDD; 99.5 2.3E-14 7.7E-19 133.0 9.2 109 56-178 64-174 (569)
172 4dmg_A Putative uncharacterize 99.5 6.3E-14 2.2E-18 124.0 11.7 133 41-181 197-330 (393)
173 2ip2_A Probable phenazine-spec 99.5 3.7E-14 1.3E-18 122.9 9.7 104 60-179 169-274 (334)
174 3q87_B N6 adenine specific DNA 99.5 4.5E-14 1.5E-18 110.8 9.1 120 57-195 22-143 (170)
175 1u2z_A Histone-lysine N-methyl 99.5 1.4E-13 4.8E-18 122.8 13.0 106 56-177 240-359 (433)
176 3bzb_A Uncharacterized protein 99.5 1.1E-13 3.9E-18 117.2 11.8 105 57-176 78-204 (281)
177 3duw_A OMT, O-methyltransferas 99.5 5.5E-14 1.9E-18 114.8 9.3 104 57-178 57-168 (223)
178 3tr6_A O-methyltransferase; ce 99.5 3.2E-14 1.1E-18 116.3 7.8 105 57-179 63-176 (225)
179 1g8a_A Fibrillarin-like PRE-rR 99.5 2.5E-13 8.5E-18 111.2 13.1 102 56-176 71-177 (227)
180 1r18_A Protein-L-isoaspartate( 99.5 4E-14 1.4E-18 116.1 8.1 108 50-179 76-196 (227)
181 2gpy_A O-methyltransferase; st 99.5 5.5E-14 1.9E-18 115.7 8.7 104 57-178 53-161 (233)
182 3c0k_A UPF0064 protein YCCW; P 99.5 6.8E-14 2.3E-18 124.3 9.9 135 40-181 203-343 (396)
183 1wxx_A TT1595, hypothetical pr 99.5 6.7E-14 2.3E-18 123.7 9.3 133 40-181 193-329 (382)
184 2qm3_A Predicted methyltransfe 99.5 2.6E-13 8.8E-18 119.6 13.1 104 58-178 172-279 (373)
185 3v97_A Ribosomal RNA large sub 99.5 1.5E-13 5.2E-18 130.0 12.3 134 41-179 523-659 (703)
186 2h00_A Methyltransferase 10 do 99.5 5.2E-14 1.8E-18 117.3 7.9 81 58-138 65-153 (254)
187 1i9g_A Hypothetical protein RV 99.5 7.1E-14 2.4E-18 118.0 8.3 105 56-180 97-206 (280)
188 3c3p_A Methyltransferase; NP_9 99.5 6E-14 2.1E-18 113.6 7.4 101 58-177 56-160 (210)
189 3adn_A Spermidine synthase; am 99.5 1.4E-13 4.9E-18 117.3 9.9 108 57-177 82-198 (294)
190 3id6_C Fibrillarin-like rRNA/T 99.5 4.6E-13 1.6E-17 110.1 12.4 103 56-177 74-181 (232)
191 1o54_A SAM-dependent O-methylt 99.5 9.4E-14 3.2E-18 117.3 8.3 104 56-180 110-216 (277)
192 3reo_A (ISO)eugenol O-methyltr 99.5 1.5E-13 5.2E-18 120.8 9.7 102 56-180 201-303 (368)
193 3r3h_A O-methyltransferase, SA 99.5 1.7E-14 5.7E-19 119.8 3.3 104 57-178 59-171 (242)
194 2frx_A Hypothetical protein YE 99.5 3.3E-13 1.1E-17 122.3 11.9 122 58-179 117-248 (479)
195 3lst_A CALO1 methyltransferase 99.5 1.5E-13 5.1E-18 119.9 9.3 106 56-180 182-289 (348)
196 1ej0_A FTSJ; methyltransferase 99.5 5.1E-14 1.8E-18 109.9 5.8 105 56-181 20-140 (180)
197 2yvl_A TRMI protein, hypotheti 99.5 2.2E-13 7.4E-18 112.8 9.8 104 56-180 89-193 (248)
198 2yxl_A PH0851 protein, 450AA l 99.5 2.6E-13 8.9E-18 122.4 11.0 125 56-180 257-392 (450)
199 3bwc_A Spermidine synthase; SA 99.5 2.6E-13 9E-18 116.3 10.5 110 57-179 94-212 (304)
200 2b25_A Hypothetical protein; s 99.5 3.8E-13 1.3E-17 116.8 11.4 105 56-180 103-222 (336)
201 1ne2_A Hypothetical protein TA 99.5 2.3E-13 7.9E-18 109.2 9.3 97 57-176 50-146 (200)
202 3m6w_A RRNA methylase; rRNA me 99.5 1.5E-13 5E-18 123.8 8.9 123 56-179 99-231 (464)
203 4a6d_A Hydroxyindole O-methylt 99.4 4.8E-13 1.7E-17 117.0 11.9 107 57-179 178-285 (353)
204 1wy7_A Hypothetical protein PH 99.4 5.4E-13 1.9E-17 107.5 11.0 101 57-176 48-148 (207)
205 3p9c_A Caffeic acid O-methyltr 99.4 2.1E-13 7.3E-18 119.7 9.2 102 56-180 199-301 (364)
206 3sso_A Methyltransferase; macr 99.4 3.5E-13 1.2E-17 118.2 10.4 109 46-179 204-326 (419)
207 2yx1_A Hypothetical protein MJ 99.4 3.1E-13 1.1E-17 117.4 9.7 104 54-181 191-295 (336)
208 2plw_A Ribosomal RNA methyltra 99.4 4.2E-13 1.4E-17 107.6 9.7 110 56-180 20-157 (201)
209 1fp1_D Isoliquiritigenin 2'-O- 99.4 1.7E-13 5.7E-18 120.7 7.9 101 56-179 207-308 (372)
210 1sui_A Caffeoyl-COA O-methyltr 99.4 1.6E-13 5.6E-18 114.1 7.1 103 57-177 78-190 (247)
211 2hnk_A SAM-dependent O-methylt 99.4 1.9E-13 6.4E-18 113.0 7.4 104 57-178 59-182 (239)
212 3cbg_A O-methyltransferase; cy 99.4 5.1E-13 1.7E-17 110.0 9.3 104 57-178 71-183 (232)
213 3dou_A Ribosomal RNA large sub 99.4 1.9E-13 6.4E-18 109.4 6.3 111 56-182 23-144 (191)
214 1fp2_A Isoflavone O-methyltran 99.4 3.5E-13 1.2E-17 117.7 8.4 101 56-179 186-290 (352)
215 2avd_A Catechol-O-methyltransf 99.4 3E-13 1E-17 110.7 7.5 104 57-178 68-180 (229)
216 3m4x_A NOL1/NOP2/SUN family pr 99.4 3.9E-13 1.3E-17 120.8 8.6 125 56-180 103-237 (456)
217 1xj5_A Spermidine synthase 1; 99.4 4.8E-13 1.6E-17 116.0 8.8 109 57-176 119-234 (334)
218 3c3y_A Pfomt, O-methyltransfer 99.4 3.9E-13 1.3E-17 111.1 7.9 103 57-177 69-181 (237)
219 3giw_A Protein of unknown func 99.4 5.6E-13 1.9E-17 111.7 8.6 110 60-181 80-204 (277)
220 2zfu_A Nucleomethylin, cerebra 99.4 3.9E-13 1.3E-17 109.0 7.4 97 48-180 58-154 (215)
221 1uir_A Polyamine aminopropyltr 99.4 5.8E-13 2E-17 114.6 8.8 113 57-177 76-195 (314)
222 1mjf_A Spermidine synthase; sp 99.4 5.3E-13 1.8E-17 113.1 8.3 106 57-177 74-193 (281)
223 1sqg_A SUN protein, FMU protei 99.4 6.9E-13 2.3E-17 119.0 9.4 124 56-180 244-377 (429)
224 2i7c_A Spermidine synthase; tr 99.4 6.7E-13 2.3E-17 112.6 8.8 109 57-178 77-193 (283)
225 2o07_A Spermidine synthase; st 99.4 7.5E-13 2.6E-17 113.4 9.1 110 57-177 94-209 (304)
226 1inl_A Spermidine synthase; be 99.4 1.3E-12 4.4E-17 111.6 9.8 111 57-179 89-207 (296)
227 3lcv_B Sisomicin-gentamicin re 99.4 8.5E-13 2.9E-17 109.0 8.3 149 45-209 119-278 (281)
228 2b2c_A Spermidine synthase; be 99.4 7E-13 2.4E-17 114.0 8.0 108 57-177 107-222 (314)
229 3gjy_A Spermidine synthase; AP 99.4 6E-13 2E-17 114.0 7.3 109 60-179 91-202 (317)
230 1zq9_A Probable dimethyladenos 99.4 1.4E-12 4.8E-17 110.8 8.9 78 56-136 26-104 (285)
231 2pt6_A Spermidine synthase; tr 99.4 1.3E-12 4.5E-17 112.7 8.6 110 57-179 115-232 (321)
232 3hp7_A Hemolysin, putative; st 99.4 4.2E-13 1.4E-17 113.7 5.3 96 58-176 85-184 (291)
233 3frh_A 16S rRNA methylase; met 99.4 1.7E-11 5.7E-16 100.3 14.2 134 57-208 104-247 (253)
234 2bm8_A Cephalosporin hydroxyla 99.4 6.9E-13 2.4E-17 109.6 6.2 97 58-177 81-187 (236)
235 2nyu_A Putative ribosomal RNA 99.4 2.5E-12 8.6E-17 102.5 9.3 112 55-182 19-150 (196)
236 1iy9_A Spermidine synthase; ro 99.3 1.2E-12 4.3E-17 110.5 7.6 112 57-179 74-191 (275)
237 2f8l_A Hypothetical protein LM 99.3 2.1E-12 7.3E-17 112.5 8.7 119 58-178 130-257 (344)
238 1zg3_A Isoflavanone 4'-O-methy 99.3 2.1E-12 7E-17 113.1 8.4 100 57-179 192-295 (358)
239 2h1r_A Dimethyladenosine trans 99.3 1.1E-11 3.9E-16 105.8 11.7 78 56-136 40-117 (299)
240 2b9e_A NOL1/NOP2/SUN domain fa 99.3 3.6E-11 1.2E-15 103.1 14.3 124 56-180 100-237 (309)
241 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.8E-11 6.3E-16 109.8 12.5 100 57-176 285-388 (433)
242 2jjq_A Uncharacterized RNA met 99.3 1.3E-11 4.5E-16 110.3 11.2 100 56-177 288-387 (425)
243 2oxt_A Nucleoside-2'-O-methylt 99.3 1.4E-12 4.9E-17 109.5 4.0 108 55-179 71-187 (265)
244 2wa2_A Non-structural protein 99.3 1.7E-12 5.9E-17 109.6 4.1 109 55-179 79-195 (276)
245 2cmg_A Spermidine synthase; tr 99.3 4.1E-12 1.4E-16 106.6 6.3 97 57-177 71-171 (262)
246 3ldu_A Putative methylase; str 99.3 6.1E-11 2.1E-15 104.7 13.8 113 56-180 193-347 (385)
247 3k0b_A Predicted N6-adenine-sp 99.3 3.1E-11 1.1E-15 106.9 11.7 113 56-180 199-353 (393)
248 2p41_A Type II methyltransfera 99.3 4.6E-12 1.6E-16 108.5 6.0 111 55-180 79-194 (305)
249 3ldg_A Putative uncharacterize 99.3 4.6E-11 1.6E-15 105.3 12.5 113 56-180 192-346 (384)
250 2ld4_A Anamorsin; methyltransf 99.2 2.7E-12 9.1E-17 100.9 3.7 91 54-177 8-101 (176)
251 3opn_A Putative hemolysin; str 99.2 6.4E-12 2.2E-16 103.5 5.2 96 58-176 37-136 (232)
252 3bt7_A TRNA (uracil-5-)-methyl 99.2 4.4E-11 1.5E-15 105.1 9.8 103 58-182 213-331 (369)
253 3gru_A Dimethyladenosine trans 99.2 6.8E-11 2.3E-15 100.6 10.6 78 56-136 48-125 (295)
254 2dul_A N(2),N(2)-dimethylguano 99.2 4.5E-11 1.5E-15 105.2 7.9 100 58-176 47-163 (378)
255 1yub_A Ermam, rRNA methyltrans 99.2 3E-12 1E-16 106.3 0.3 104 56-177 27-145 (245)
256 2okc_A Type I restriction enzy 99.2 2.9E-11 1E-15 108.8 6.5 118 57-178 170-308 (445)
257 2ih2_A Modification methylase 99.2 5.5E-11 1.9E-15 106.0 7.8 110 58-179 39-166 (421)
258 3axs_A Probable N(2),N(2)-dime 99.1 6.2E-11 2.1E-15 104.5 7.7 101 58-177 52-158 (392)
259 3ll7_A Putative methyltransfer 99.1 1E-10 3.4E-15 103.5 8.6 155 53-215 88-246 (410)
260 2qfm_A Spermine synthase; sper 99.1 1.3E-10 4.6E-15 100.7 8.5 116 57-180 187-317 (364)
261 4fzv_A Putative methyltransfer 99.1 2E-10 6.7E-15 100.1 9.4 126 55-180 145-287 (359)
262 3tqs_A Ribosomal RNA small sub 99.1 9.4E-10 3.2E-14 91.7 13.1 76 56-135 27-106 (255)
263 1qam_A ERMC' methyltransferase 99.1 1.3E-09 4.4E-14 90.3 12.7 75 57-135 29-104 (244)
264 3v97_A Ribosomal RNA large sub 99.1 1.1E-09 3.7E-14 103.7 13.6 116 57-180 189-350 (703)
265 3fut_A Dimethyladenosine trans 99.1 8E-10 2.8E-14 92.8 11.4 77 56-137 45-122 (271)
266 2xyq_A Putative 2'-O-methyl tr 99.1 2.4E-10 8.1E-15 96.9 8.2 106 55-180 60-174 (290)
267 2r6z_A UPF0341 protein in RSP 99.0 9.4E-11 3.2E-15 98.0 2.5 80 57-137 82-173 (258)
268 3cvo_A Methyltransferase-like 99.0 2.7E-09 9.4E-14 85.4 10.6 109 47-177 19-154 (202)
269 3lkd_A Type I restriction-modi 99.0 3.5E-09 1.2E-13 97.2 11.7 122 58-179 221-360 (542)
270 2ar0_A M.ecoki, type I restric 99.0 1E-09 3.5E-14 101.0 8.0 121 57-178 168-313 (541)
271 1m6y_A S-adenosyl-methyltransf 98.9 1.5E-09 5.2E-14 92.5 6.8 77 56-133 24-106 (301)
272 3uzu_A Ribosomal RNA small sub 98.9 1.6E-08 5.4E-13 85.3 12.2 75 56-135 40-124 (279)
273 3khk_A Type I restriction-modi 98.9 3.1E-09 1.1E-13 97.7 7.3 134 46-179 231-397 (544)
274 3ftd_A Dimethyladenosine trans 98.9 9.8E-09 3.3E-13 85.3 9.4 76 56-135 29-105 (249)
275 4gqb_A Protein arginine N-meth 98.8 3.6E-09 1.2E-13 98.2 7.2 101 59-174 358-464 (637)
276 3o4f_A Spermidine synthase; am 98.8 3.9E-08 1.3E-12 83.1 11.8 111 56-177 81-198 (294)
277 3s1s_A Restriction endonucleas 98.8 2.5E-08 8.6E-13 94.1 11.2 123 57-179 320-467 (878)
278 3ua3_A Protein arginine N-meth 98.8 3.5E-09 1.2E-13 98.4 4.0 102 59-174 410-531 (745)
279 1qyr_A KSGA, high level kasuga 98.7 8.9E-09 3E-13 85.6 5.8 75 56-135 19-100 (252)
280 2k4m_A TR8_protein, UPF0146 pr 98.7 6.7E-08 2.3E-12 72.6 8.2 99 46-180 23-124 (153)
281 2oyr_A UPF0341 protein YHIQ; a 98.7 1.7E-08 5.8E-13 84.1 5.3 79 57-136 85-175 (258)
282 3evf_A RNA-directed RNA polyme 98.6 5.9E-08 2E-12 80.6 6.2 121 48-179 63-186 (277)
283 3b5i_A S-adenosyl-L-methionine 98.5 3.7E-07 1.3E-11 79.8 8.0 124 59-182 53-230 (374)
284 2efj_A 3,7-dimethylxanthine me 98.4 1.1E-06 3.8E-11 77.0 9.8 122 59-182 53-230 (384)
285 3gcz_A Polyprotein; flavivirus 98.4 1.1E-07 3.8E-12 79.1 3.3 114 55-179 87-203 (282)
286 2wk1_A NOVP; transferase, O-me 98.4 1.1E-06 3.9E-11 73.9 9.2 105 57-178 105-245 (282)
287 3c6k_A Spermine synthase; sper 98.4 9.5E-07 3.3E-11 76.9 8.9 115 57-176 204-330 (381)
288 2qy6_A UPF0209 protein YFCK; s 98.4 2.8E-07 9.4E-12 76.8 5.2 105 58-175 60-211 (257)
289 3ufb_A Type I restriction-modi 98.4 1.2E-06 4E-11 80.4 9.2 133 46-178 203-363 (530)
290 4auk_A Ribosomal RNA large sub 98.3 2.3E-06 7.8E-11 74.3 10.1 100 55-178 208-307 (375)
291 1m6e_X S-adenosyl-L-methionnin 98.3 2.2E-06 7.4E-11 74.5 8.3 125 58-182 51-214 (359)
292 1wg8_A Predicted S-adenosylmet 98.2 3.5E-06 1.2E-10 70.4 7.8 72 56-132 20-96 (285)
293 3eld_A Methyltransferase; flav 98.1 1.2E-05 4E-10 67.4 9.7 113 54-179 77-193 (300)
294 2zig_A TTHA0409, putative modi 98.1 7.7E-06 2.6E-10 69.4 7.7 56 48-104 225-280 (297)
295 3p8z_A Mtase, non-structural p 97.8 4E-05 1.4E-09 62.0 7.0 114 55-182 75-191 (267)
296 1g60_A Adenine-specific methyl 97.8 2.8E-05 9.7E-10 64.6 6.4 57 48-105 202-258 (260)
297 2px2_A Genome polyprotein [con 97.8 1.1E-05 3.8E-10 66.1 3.4 107 55-180 70-186 (269)
298 3lkz_A Non-structural protein 97.7 0.00022 7.7E-09 59.5 9.8 111 55-180 91-207 (321)
299 2oo3_A Protein involved in cat 97.6 3.6E-05 1.2E-09 64.3 3.4 100 58-175 91-196 (283)
300 2vz8_A Fatty acid synthase; tr 97.4 7E-05 2.4E-09 79.8 3.0 103 58-178 1240-1349(2512)
301 1i4w_A Mitochondrial replicati 97.3 0.00086 3E-08 58.0 9.0 58 59-119 59-117 (353)
302 1rjd_A PPM1P, carboxy methyl t 97.3 0.0027 9.2E-08 54.6 11.7 108 57-179 96-234 (334)
303 3tka_A Ribosomal RNA small sub 97.2 0.00039 1.3E-08 59.5 5.5 73 56-132 55-135 (347)
304 3g7u_A Cytosine-specific methy 97.2 0.00064 2.2E-08 59.5 7.0 70 60-134 3-80 (376)
305 3r24_A NSP16, 2'-O-methyl tran 97.2 0.00088 3E-08 56.0 7.1 117 47-182 95-222 (344)
306 1g55_A DNA cytosine methyltran 97.1 0.00038 1.3E-08 60.2 4.1 71 59-134 2-77 (343)
307 1boo_A Protein (N-4 cytosine-s 97.0 0.001 3.6E-08 56.9 5.9 70 47-118 241-310 (323)
308 2c7p_A Modification methylase 96.9 0.0023 7.9E-08 54.9 7.4 71 59-136 11-82 (327)
309 1eg2_A Modification methylase 96.7 0.0015 5.2E-08 55.8 5.2 57 47-104 231-290 (319)
310 1f8f_A Benzyl alcohol dehydrog 96.7 0.0073 2.5E-07 52.4 9.0 97 55-178 187-290 (371)
311 3tos_A CALS11; methyltransfera 96.5 0.021 7.2E-07 47.0 10.3 107 57-180 68-220 (257)
312 2qrv_A DNA (cytosine-5)-methyl 96.4 0.01 3.4E-07 50.1 7.8 77 54-135 11-93 (295)
313 2py6_A Methyltransferase FKBM; 96.4 0.0082 2.8E-07 53.0 7.4 61 56-116 224-291 (409)
314 3fpc_A NADP-dependent alcohol 96.3 0.013 4.5E-07 50.4 8.2 99 54-179 162-268 (352)
315 4h0n_A DNMT2; SAH binding, tra 96.3 0.0048 1.6E-07 53.0 5.2 70 60-134 4-78 (333)
316 3ubt_Y Modification methylase 96.2 0.008 2.7E-07 51.2 6.4 67 61-133 2-69 (331)
317 3two_A Mannitol dehydrogenase; 96.2 0.012 4.1E-07 50.5 7.5 94 55-180 173-268 (348)
318 3qv2_A 5-cytosine DNA methyltr 96.1 0.0082 2.8E-07 51.4 6.0 71 58-134 9-85 (327)
319 1pl8_A Human sorbitol dehydrog 96.0 0.0092 3.2E-07 51.5 6.0 97 55-178 168-274 (356)
320 3m6i_A L-arabinitol 4-dehydrog 96.0 0.047 1.6E-06 47.0 10.5 100 55-179 176-285 (363)
321 3vyw_A MNMC2; tRNA wobble urid 96.0 0.016 5.6E-07 48.9 7.2 121 58-194 96-241 (308)
322 3s2e_A Zinc-containing alcohol 96.0 0.028 9.7E-07 47.9 8.7 97 55-179 163-265 (340)
323 3uko_A Alcohol dehydrogenase c 95.9 0.02 6.8E-07 49.8 7.7 97 55-178 190-296 (378)
324 4ej6_A Putative zinc-binding d 95.9 0.037 1.3E-06 48.0 9.3 99 54-179 178-286 (370)
325 4dvj_A Putative zinc-dependent 95.9 0.0028 9.7E-08 55.0 2.1 92 58-176 171-269 (363)
326 1e3j_A NADP(H)-dependent ketos 95.9 0.017 5.8E-07 49.7 6.9 96 55-178 165-272 (352)
327 2dph_A Formaldehyde dismutase; 95.9 0.015 5.3E-07 50.9 6.7 110 55-178 182-300 (398)
328 1kol_A Formaldehyde dehydrogen 95.8 0.029 9.9E-07 49.0 8.4 111 55-178 182-301 (398)
329 3uog_A Alcohol dehydrogenase; 95.8 0.022 7.4E-07 49.3 7.4 97 54-179 185-289 (363)
330 2uyo_A Hypothetical protein ML 95.7 0.12 4.1E-06 43.7 11.5 105 59-179 103-220 (310)
331 3ip1_A Alcohol dehydrogenase, 95.6 0.03 1E-06 49.2 7.6 103 55-179 210-320 (404)
332 3goh_A Alcohol dehydrogenase, 95.6 0.01 3.5E-07 50.2 4.5 89 55-177 139-229 (315)
333 3jv7_A ADH-A; dehydrogenase, n 95.6 0.014 4.7E-07 50.1 5.3 98 55-179 168-272 (345)
334 1uuf_A YAHK, zinc-type alcohol 95.6 0.013 4.6E-07 50.8 5.1 94 55-178 191-289 (369)
335 1p0f_A NADP-dependent alcohol 95.6 0.038 1.3E-06 47.8 8.0 97 55-178 188-294 (373)
336 2h6e_A ADH-4, D-arabinose 1-de 95.5 0.0063 2.2E-07 52.2 2.7 94 55-178 168-270 (344)
337 2fzw_A Alcohol dehydrogenase c 95.4 0.052 1.8E-06 46.9 8.3 97 55-178 187-293 (373)
338 3fwz_A Inner membrane protein 95.4 0.17 5.8E-06 37.1 10.0 95 59-179 7-107 (140)
339 3qwb_A Probable quinone oxidor 95.2 0.044 1.5E-06 46.6 7.2 95 55-178 145-248 (334)
340 3jyn_A Quinone oxidoreductase; 95.2 0.04 1.4E-06 46.7 6.8 96 55-179 137-241 (325)
341 4a2c_A Galactitol-1-phosphate 95.2 0.15 5.1E-06 43.4 10.4 99 54-179 156-262 (346)
342 3me5_A Cytosine-specific methy 95.2 0.02 6.9E-07 51.5 5.0 59 59-119 88-146 (482)
343 2b5w_A Glucose dehydrogenase; 95.2 0.042 1.4E-06 47.3 6.9 93 56-178 164-274 (357)
344 2d8a_A PH0655, probable L-thre 95.1 0.071 2.4E-06 45.6 8.2 96 55-178 165-268 (348)
345 1pqw_A Polyketide synthase; ro 95.1 0.042 1.5E-06 42.8 6.2 93 55-178 35-138 (198)
346 1vj0_A Alcohol dehydrogenase, 95.1 0.036 1.2E-06 48.2 6.3 96 56-178 193-299 (380)
347 4eez_A Alcohol dehydrogenase 1 95.0 0.051 1.8E-06 46.4 7.0 99 55-178 160-264 (348)
348 4eye_A Probable oxidoreductase 94.9 0.048 1.6E-06 46.6 6.6 94 55-178 156-258 (342)
349 1cdo_A Alcohol dehydrogenase; 94.9 0.064 2.2E-06 46.4 7.4 97 55-178 189-295 (374)
350 1e3i_A Alcohol dehydrogenase, 94.9 0.064 2.2E-06 46.5 7.4 97 55-178 192-298 (376)
351 4b7c_A Probable oxidoreductase 94.9 0.064 2.2E-06 45.6 7.3 96 55-178 146-249 (336)
352 1rjw_A ADH-HT, alcohol dehydro 94.9 0.078 2.7E-06 45.2 7.8 93 55-178 161-262 (339)
353 2jhf_A Alcohol dehydrogenase E 94.8 0.082 2.8E-06 45.7 7.8 97 55-178 188-294 (374)
354 3gms_A Putative NADPH:quinone 94.8 0.05 1.7E-06 46.4 6.2 95 55-178 141-244 (340)
355 2zig_A TTHA0409, putative modi 94.7 0.021 7.1E-07 48.1 3.7 70 108-177 21-97 (297)
356 3nx4_A Putative oxidoreductase 94.7 0.042 1.5E-06 46.4 5.6 90 61-178 149-242 (324)
357 2c0c_A Zinc binding alcohol de 94.6 0.095 3.3E-06 45.2 7.8 95 55-178 160-262 (362)
358 3fbg_A Putative arginate lyase 94.5 0.025 8.4E-07 48.5 3.7 92 58-177 150-248 (346)
359 3krt_A Crotonyl COA reductase; 94.4 0.16 5.4E-06 45.2 8.9 96 55-178 225-345 (456)
360 2j3h_A NADP-dependent oxidored 94.4 0.078 2.7E-06 45.2 6.7 96 55-178 152-256 (345)
361 1piw_A Hypothetical zinc-type 94.3 0.014 4.6E-07 50.5 1.6 98 54-178 175-277 (360)
362 1v3u_A Leukotriene B4 12- hydr 94.2 0.11 3.7E-06 44.1 7.1 96 55-178 142-245 (333)
363 3c85_A Putative glutathione-re 94.1 0.39 1.3E-05 36.7 9.6 95 59-179 39-141 (183)
364 3tqh_A Quinone oxidoreductase; 94.1 0.17 5.7E-06 42.7 7.9 94 54-177 148-245 (321)
365 2cf5_A Atccad5, CAD, cinnamyl 94.0 0.035 1.2E-06 47.8 3.5 98 55-178 176-276 (357)
366 1jvb_A NAD(H)-dependent alcoho 93.9 0.15 5.2E-06 43.5 7.5 97 54-178 166-272 (347)
367 4dup_A Quinone oxidoreductase; 93.9 0.14 4.7E-06 44.0 7.2 95 55-178 164-266 (353)
368 1yb5_A Quinone oxidoreductase; 93.9 0.17 6E-06 43.3 7.8 95 55-178 167-270 (351)
369 4dcm_A Ribosomal RNA large sub 93.8 0.63 2.1E-05 40.3 11.3 114 41-178 22-137 (375)
370 3gaz_A Alcohol dehydrogenase s 93.8 0.2 6.7E-06 42.8 7.9 91 55-177 147-246 (343)
371 3llv_A Exopolyphosphatase-rela 93.8 0.63 2.1E-05 33.8 9.8 66 59-132 6-77 (141)
372 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.66 2.3E-05 37.6 10.9 120 58-178 6-148 (266)
373 2eih_A Alcohol dehydrogenase; 93.7 0.3 1E-05 41.6 8.9 93 55-178 163-266 (343)
374 2j8z_A Quinone oxidoreductase; 93.7 0.18 6.3E-06 43.2 7.6 95 55-178 159-262 (354)
375 1yqd_A Sinapyl alcohol dehydro 93.6 0.067 2.3E-06 46.2 4.7 97 55-178 183-283 (366)
376 2cdc_A Glucose dehydrogenase g 93.6 0.18 6.2E-06 43.4 7.4 89 59-178 181-279 (366)
377 2dq4_A L-threonine 3-dehydroge 93.2 0.015 5.1E-07 49.8 -0.1 95 55-178 162-263 (343)
378 3o26_A Salutaridine reductase; 93.0 0.61 2.1E-05 38.5 9.7 77 58-135 11-101 (311)
379 1iz0_A Quinone oxidoreductase; 93.0 0.056 1.9E-06 45.3 3.1 93 56-178 123-219 (302)
380 2hcy_A Alcohol dehydrogenase 1 93.0 0.21 7.1E-06 42.7 6.8 94 55-178 166-270 (347)
381 1tt7_A YHFP; alcohol dehydroge 92.9 0.094 3.2E-06 44.4 4.4 96 55-178 146-248 (330)
382 1xa0_A Putative NADPH dependen 92.9 0.088 3E-06 44.6 4.2 96 55-178 145-247 (328)
383 3swr_A DNA (cytosine-5)-methyl 92.6 0.14 4.9E-06 50.0 5.7 72 58-134 539-627 (1002)
384 4fs3_A Enoyl-[acyl-carrier-pro 92.6 1.1 3.7E-05 36.4 10.4 76 58-134 5-95 (256)
385 4fgs_A Probable dehydrogenase 92.6 0.97 3.3E-05 37.3 10.1 111 58-177 28-159 (273)
386 4a0s_A Octenoyl-COA reductase/ 92.6 0.38 1.3E-05 42.5 8.1 97 55-178 217-337 (447)
387 2vn8_A Reticulon-4-interacting 92.5 0.038 1.3E-06 47.9 1.4 94 56-177 181-280 (375)
388 1zkd_A DUF185; NESG, RPR58, st 92.4 0.3 1E-05 42.6 7.0 53 58-112 80-140 (387)
389 1wly_A CAAR, 2-haloacrylate re 92.3 0.37 1.3E-05 40.8 7.4 93 55-178 142-245 (333)
390 1id1_A Putative potassium chan 92.3 1.3 4.6E-05 32.6 9.8 98 59-179 3-107 (153)
391 1qor_A Quinone oxidoreductase; 92.2 0.27 9.2E-06 41.5 6.4 95 55-178 137-240 (327)
392 3grk_A Enoyl-(acyl-carrier-pro 92.2 1.6 5.4E-05 36.2 11.1 118 58-178 30-170 (293)
393 1lss_A TRK system potassium up 92.2 1.8 6.3E-05 30.8 10.3 67 59-132 4-76 (140)
394 3l9w_A Glutathione-regulated p 92.2 0.64 2.2E-05 40.9 9.0 94 59-178 4-103 (413)
395 1boo_A Protein (N-4 cytosine-s 92.2 0.097 3.3E-06 44.5 3.6 68 108-178 14-85 (323)
396 3ggo_A Prephenate dehydrogenas 92.2 0.55 1.9E-05 39.6 8.2 91 60-176 34-127 (314)
397 2zb4_A Prostaglandin reductase 92.1 0.37 1.3E-05 41.2 7.2 95 55-178 155-261 (357)
398 3pxx_A Carveol dehydrogenase; 91.9 1.5 5.1E-05 35.8 10.6 112 58-177 9-153 (287)
399 4eso_A Putative oxidoreductase 91.9 0.98 3.3E-05 36.5 9.2 111 58-177 7-138 (255)
400 4g81_D Putative hexonate dehyd 91.8 1 3.5E-05 36.8 9.2 76 58-135 8-96 (255)
401 3ado_A Lambda-crystallin; L-gu 91.1 0.66 2.3E-05 39.3 7.6 100 59-179 6-125 (319)
402 3gqv_A Enoyl reductase; medium 90.8 0.94 3.2E-05 38.9 8.5 92 57-177 163-263 (371)
403 2ew2_A 2-dehydropantoate 2-red 90.7 2.1 7.1E-05 35.4 10.3 92 60-177 4-108 (316)
404 3pvc_A TRNA 5-methylaminomethy 90.6 0.25 8.4E-06 46.4 4.9 104 58-175 58-209 (689)
405 3edm_A Short chain dehydrogena 90.5 1.1 3.7E-05 36.3 8.2 115 58-177 7-143 (259)
406 2g1u_A Hypothetical protein TM 90.4 0.57 2E-05 34.8 6.0 97 57-178 17-119 (155)
407 3ius_A Uncharacterized conserv 90.3 2.5 8.5E-05 34.3 10.3 62 60-133 6-71 (286)
408 1zsy_A Mitochondrial 2-enoyl t 90.2 0.42 1.4E-05 40.9 5.7 95 55-177 164-270 (357)
409 3is3_A 17BETA-hydroxysteroid d 90.0 2.3 7.7E-05 34.6 9.8 115 58-178 17-153 (270)
410 3l4b_C TRKA K+ channel protien 89.9 2.1 7.3E-05 33.5 9.3 91 61-176 2-98 (218)
411 3ek2_A Enoyl-(acyl-carrier-pro 89.9 2.2 7.5E-05 34.4 9.6 118 57-177 12-153 (271)
412 2dpo_A L-gulonate 3-dehydrogen 89.9 1.6 5.5E-05 36.9 9.0 97 60-177 7-123 (319)
413 2eez_A Alanine dehydrogenase; 89.9 0.19 6.6E-06 43.5 3.2 101 58-178 165-267 (369)
414 3g0o_A 3-hydroxyisobutyrate de 89.9 0.95 3.3E-05 37.7 7.5 90 59-176 7-101 (303)
415 1zcj_A Peroxisomal bifunctiona 89.8 2.3 8E-05 37.8 10.4 95 60-176 38-149 (463)
416 1gu7_A Enoyl-[acyl-carrier-pro 89.7 0.099 3.4E-06 44.9 1.3 95 55-178 163-276 (364)
417 2f1k_A Prephenate dehydrogenas 89.4 1.9 6.6E-05 35.2 8.9 86 61-175 2-89 (279)
418 4e12_A Diketoreductase; oxidor 89.3 1.4 4.7E-05 36.4 8.0 96 60-176 5-120 (283)
419 1wma_A Carbonyl reductase [NAD 89.1 1.5 5E-05 35.3 8.0 114 58-177 3-138 (276)
420 3k31_A Enoyl-(acyl-carrier-pro 89.0 2.5 8.7E-05 34.9 9.5 118 58-178 29-169 (296)
421 3v2g_A 3-oxoacyl-[acyl-carrier 88.8 3.8 0.00013 33.3 10.3 114 58-177 30-165 (271)
422 3r3s_A Oxidoreductase; structu 88.7 2.1 7.2E-05 35.4 8.8 115 58-177 48-185 (294)
423 3ps9_A TRNA 5-methylaminomethy 88.4 0.81 2.8E-05 42.8 6.6 105 58-176 66-218 (676)
424 3hwr_A 2-dehydropantoate 2-red 88.2 2 7E-05 36.0 8.4 101 58-179 18-122 (318)
425 3ijr_A Oxidoreductase, short c 88.2 3.7 0.00013 33.8 10.0 115 58-177 46-182 (291)
426 3c24_A Putative oxidoreductase 88.1 2.8 9.4E-05 34.4 9.1 85 60-175 12-99 (286)
427 4a27_A Synaptic vesicle membra 88.1 0.68 2.3E-05 39.4 5.4 94 55-178 139-239 (349)
428 4fn4_A Short chain dehydrogena 88.1 1.8 6.2E-05 35.3 7.8 75 58-134 6-93 (254)
429 3u5t_A 3-oxoacyl-[acyl-carrier 88.1 2.3 7.9E-05 34.6 8.5 114 58-177 26-161 (267)
430 3pi7_A NADH oxidoreductase; gr 87.7 0.59 2E-05 39.8 4.8 92 58-178 163-264 (349)
431 1pjc_A Protein (L-alanine dehy 87.7 0.16 5.3E-06 43.9 1.1 102 59-180 167-270 (361)
432 3ce6_A Adenosylhomocysteinase; 87.6 0.7 2.4E-05 41.6 5.4 91 56-180 271-364 (494)
433 2g5c_A Prephenate dehydrogenas 87.5 2.8 9.5E-05 34.2 8.7 89 61-176 3-95 (281)
434 3av4_A DNA (cytosine-5)-methyl 87.5 1 3.5E-05 45.4 6.8 53 59-116 851-904 (1330)
435 1zej_A HBD-9, 3-hydroxyacyl-CO 87.4 2.8 9.6E-05 34.9 8.7 93 59-176 12-106 (293)
436 2vhw_A Alanine dehydrogenase; 87.4 0.14 5E-06 44.4 0.7 101 58-178 167-269 (377)
437 1g60_A Adenine-specific methyl 87.2 0.25 8.4E-06 40.5 2.0 67 109-176 5-73 (260)
438 3t4x_A Oxidoreductase, short c 87.2 3.9 0.00013 33.0 9.4 76 58-134 9-94 (267)
439 4f3n_A Uncharacterized ACR, CO 86.9 0.73 2.5E-05 40.7 5.0 45 59-103 138-188 (432)
440 3k6j_A Protein F01G10.3, confi 86.7 6.2 0.00021 35.1 10.9 98 59-178 54-167 (460)
441 3zwc_A Peroxisomal bifunctiona 86.6 4.5 0.00015 38.3 10.5 98 60-179 317-431 (742)
442 3o38_A Short chain dehydrogena 86.4 2.6 8.8E-05 34.0 7.8 77 58-135 21-111 (266)
443 3d1l_A Putative NADP oxidoredu 86.3 4.1 0.00014 32.9 9.1 91 59-177 10-102 (266)
444 1g0o_A Trihydroxynaphthalene r 86.0 4.7 0.00016 32.9 9.3 114 58-177 28-163 (283)
445 4ft4_B DNA (cytosine-5)-methyl 86.0 0.7 2.4E-05 44.0 4.7 54 59-117 212-271 (784)
446 1eg2_A Modification methylase 85.8 0.53 1.8E-05 39.9 3.4 66 109-178 39-107 (319)
447 3mog_A Probable 3-hydroxybutyr 85.7 2.5 8.5E-05 37.9 7.9 96 60-177 6-120 (483)
448 3ksu_A 3-oxoacyl-acyl carrier 85.6 3.1 0.00011 33.6 7.9 114 58-177 10-147 (262)
449 1f0y_A HCDH, L-3-hydroxyacyl-C 85.4 3.5 0.00012 34.1 8.3 94 60-174 16-133 (302)
450 3i83_A 2-dehydropantoate 2-red 85.4 1.6 5.4E-05 36.7 6.2 99 60-179 3-107 (320)
451 3iei_A Leucine carboxyl methyl 85.3 8.8 0.0003 32.6 10.8 106 58-178 90-230 (334)
452 3b1f_A Putative prephenate deh 84.9 4.9 0.00017 32.9 9.0 88 60-174 7-98 (290)
453 2cvz_A Dehydrogenase, 3-hydrox 84.6 3.6 0.00012 33.6 8.0 85 61-176 3-89 (289)
454 3k96_A Glycerol-3-phosphate de 84.4 3.8 0.00013 35.0 8.2 95 59-176 29-132 (356)
455 3ucx_A Short chain dehydrogena 84.2 4.2 0.00015 32.8 8.2 74 58-133 10-96 (264)
456 3qiv_A Short-chain dehydrogena 84.1 3.4 0.00012 33.0 7.5 75 58-134 8-95 (253)
457 3tjr_A Short chain dehydrogena 83.5 3.9 0.00013 33.8 7.8 76 58-135 30-118 (301)
458 3f9i_A 3-oxoacyl-[acyl-carrier 83.2 3.6 0.00012 32.7 7.3 74 57-135 12-94 (249)
459 3pk0_A Short-chain dehydrogena 83.2 3.4 0.00012 33.4 7.2 77 58-135 9-98 (262)
460 2h78_A Hibadh, 3-hydroxyisobut 82.9 2.5 8.5E-05 35.0 6.3 88 60-176 4-96 (302)
461 2gdz_A NAD+-dependent 15-hydro 82.8 10 0.00034 30.4 9.9 76 58-134 6-95 (267)
462 4imr_A 3-oxoacyl-(acyl-carrier 82.8 1.9 6.4E-05 35.3 5.4 76 58-135 32-119 (275)
463 3h7a_A Short chain dehydrogena 82.7 2.4 8.2E-05 34.1 6.0 76 58-135 6-93 (252)
464 3h8v_A Ubiquitin-like modifier 82.7 1.3 4.6E-05 36.9 4.5 54 58-112 35-108 (292)
465 3qha_A Putative oxidoreductase 82.1 2.4 8.3E-05 35.1 5.9 88 60-177 16-105 (296)
466 2hmt_A YUAA protein; RCK, KTN, 82.0 4.8 0.00016 28.6 6.9 66 59-132 6-77 (144)
467 4g65_A TRK system potassium up 81.7 1.7 5.7E-05 38.8 5.0 67 59-131 3-74 (461)
468 3dmg_A Probable ribosomal RNA 81.6 10 0.00034 32.7 9.9 96 58-178 45-140 (381)
469 2wtb_A MFP2, fatty acid multif 81.6 9.4 0.00032 36.0 10.3 95 60-176 313-426 (725)
470 3gaf_A 7-alpha-hydroxysteroid 81.5 4.2 0.00014 32.7 7.1 76 58-135 11-99 (256)
471 1bg6_A N-(1-D-carboxylethyl)-L 81.4 3.8 0.00013 34.5 7.1 95 60-176 5-108 (359)
472 3sju_A Keto reductase; short-c 81.4 4.9 0.00017 32.8 7.5 76 58-135 23-111 (279)
473 3imf_A Short chain dehydrogena 81.4 3.9 0.00013 32.9 6.9 75 58-134 5-92 (257)
474 3hn2_A 2-dehydropantoate 2-red 81.3 2.5 8.6E-05 35.3 5.8 92 60-179 3-105 (312)
475 3lf2_A Short chain oxidoreduct 81.3 5.8 0.0002 32.0 7.9 77 58-135 7-97 (265)
476 3rkr_A Short chain oxidoreduct 81.2 4 0.00014 32.9 6.9 76 58-135 28-116 (262)
477 1xu9_A Corticosteroid 11-beta- 81.0 4 0.00014 33.3 6.9 74 58-132 27-113 (286)
478 3v8b_A Putative dehydrogenase, 80.9 5.7 0.0002 32.5 7.8 76 58-135 27-115 (283)
479 2y0c_A BCEC, UDP-glucose dehyd 80.7 3.2 0.00011 37.1 6.5 105 58-175 7-126 (478)
480 3gg2_A Sugar dehydrogenase, UD 80.6 2.8 9.5E-05 37.2 6.1 104 60-176 3-121 (450)
481 4e21_A 6-phosphogluconate dehy 80.6 1.9 6.7E-05 37.0 4.9 93 58-177 21-115 (358)
482 3tfo_A Putative 3-oxoacyl-(acy 80.3 4.4 0.00015 32.9 6.8 75 59-135 4-91 (264)
483 3lyl_A 3-oxoacyl-(acyl-carrier 80.3 5.2 0.00018 31.7 7.2 74 59-134 5-91 (247)
484 1np3_A Ketol-acid reductoisome 80.2 2.5 8.4E-05 35.9 5.4 86 59-175 16-105 (338)
485 3nyw_A Putative oxidoreductase 79.8 5.8 0.0002 31.7 7.3 77 58-135 6-97 (250)
486 1qsg_A Enoyl-[acyl-carrier-pro 79.8 13 0.00044 29.8 9.5 74 58-134 8-96 (265)
487 3awd_A GOX2181, putative polyo 79.7 6.7 0.00023 31.2 7.7 75 58-134 12-99 (260)
488 3iht_A S-adenosyl-L-methionine 79.7 2.8 9.6E-05 31.5 4.8 32 58-89 40-72 (174)
489 2vz8_A Fatty acid synthase; tr 79.6 1.8 6.2E-05 46.7 5.2 101 55-177 1664-1770(2512)
490 3rih_A Short chain dehydrogena 79.4 3.1 0.00011 34.4 5.7 77 58-135 40-129 (293)
491 4hp8_A 2-deoxy-D-gluconate 3-d 79.3 6.2 0.00021 31.9 7.3 74 58-135 8-89 (247)
492 1yb1_A 17-beta-hydroxysteroid 79.3 6.9 0.00024 31.6 7.7 75 58-134 30-117 (272)
493 3i1j_A Oxidoreductase, short c 79.3 5.2 0.00018 31.6 6.9 76 58-134 13-103 (247)
494 4dkj_A Cytosine-specific methy 79.2 1.5 5.2E-05 38.3 3.8 45 59-103 10-60 (403)
495 4ezb_A Uncharacterized conserv 79.0 4.6 0.00016 33.9 6.7 90 60-177 25-121 (317)
496 3ioy_A Short-chain dehydrogena 79.0 7 0.00024 32.6 7.8 77 58-135 7-97 (319)
497 4dll_A 2-hydroxy-3-oxopropiona 79.0 4.5 0.00015 33.9 6.6 91 58-177 30-124 (320)
498 2h7i_A Enoyl-[acyl-carrier-pro 78.7 5.5 0.00019 32.2 6.9 116 58-178 6-149 (269)
499 3d4o_A Dipicolinate synthase s 78.7 4.4 0.00015 33.5 6.4 90 58-179 154-246 (293)
500 2nwq_A Probable short-chain de 78.7 12 0.0004 30.4 9.0 72 60-134 22-106 (272)
No 1
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.95 E-value=6.2e-27 Score=190.43 Aligned_cols=197 Identities=38% Similarity=0.764 Sum_probs=172.0
Q ss_pred CCCCccchhhhcCCCC---cccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHH
Q 025039 22 AYLDPHYWDERFSDEE---HYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQ 98 (259)
Q Consensus 22 ~~~~~~~w~~~~~~~~---~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~ 98 (259)
.|.+.+||+++|.... .+.|+.....+..++...+.++.+|||+|||+|.++..+++.+..+++++|+++.+++.++
T Consensus 3 ~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~ 82 (215)
T 2pxx_A 3 GYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQ 82 (215)
T ss_dssp GGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHH
T ss_pred cccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHH
Confidence 5678999999998754 4679988888889888888889999999999999999999998668999999999999999
Q ss_pred HHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 99 ERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 99 ~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++.. .+++.+.++|+.++++++++||+|+++++++++......+|.+.+++..+...+++++.++|+|||.+++.++
T Consensus 83 ~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 83 ACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred Hhccc--CCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 98764 2478999999988887778999999999998887666777877777788899999999999999999999999
Q ss_pred CCccccccccCCCCCCcEEEEEEeCCeEEEEEEEEEeCCCCC
Q 025039 179 GQPHFRRPFFNAPQFTWSVEWITFGDGFHYFFYILRKGKRSS 220 (259)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
+.++....++...++.|......++++.+++++++++.+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (215)
T 2pxx_A 161 AAPHFRTRHYAQAYYGWSLRHATYGSGFHFHLYLMHKGGKLS 202 (215)
T ss_dssp CCHHHHHHHHCCGGGCEEEEEEEESGGGCEEEEEEEETCCCC
T ss_pred CCcHHHHHHHhccccCcEEEEEEecCcceEEEEEEEeCCCCC
Confidence 998888788877878898888888888899899998876553
No 2
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.85 E-value=2.6e-21 Score=161.90 Aligned_cols=141 Identities=11% Similarity=0.230 Sum_probs=108.9
Q ss_pred CCCccchhhhcCCCCccccc--ccchHHHHhhccc--CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHH
Q 025039 23 YLDPHYWDERFSDEEHYEWL--KDYSHFRHLVQPH--IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQ 98 (259)
Q Consensus 23 ~~~~~~w~~~~~~~~~~~w~--~~~~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~ 98 (259)
..+.+||+++|..... .|. ...+.+...+... ..++.+|||+|||+|..+..|++.|. +|+|+|+|+.|++.|+
T Consensus 30 ~~~~~~Wd~~y~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~ 107 (252)
T 2gb4_A 30 VLTLEDWKEKWVTRHI-SFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFF 107 (252)
T ss_dssp CCCHHHHHHHHHHTCC-TTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCC-CcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHH
Confidence 4568999999976532 232 2223344444332 24678999999999999999999998 9999999999999998
Q ss_pred HHHhh-----------------cCCCCeEEEEcccCCCcCCC-CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHH
Q 025039 99 ERLLL-----------------KGYKEVKVLEADMLDLPFSN-DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAML 160 (259)
Q Consensus 99 ~~~~~-----------------~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 160 (259)
++... ....++++.++|+.+++..+ ++||+|++.++++++ +..+...++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l-------------~~~~~~~~l 174 (252)
T 2gb4_A 108 AEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAI-------------NPGDHDRYA 174 (252)
T ss_dssp HHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTS-------------CGGGHHHHH
T ss_pred HhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhC-------------CHHHHHHHH
Confidence 77532 01246999999999987653 789999999888776 334667899
Q ss_pred HHHHhcccCCcEEEEEec
Q 025039 161 EGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 161 ~~~~~~LkpgG~l~~~~~ 178 (259)
+++.++|||||+++++++
T Consensus 175 ~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 175 DIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCeEEEEEEE
Confidence 999999999999976543
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.81 E-value=1.6e-19 Score=151.78 Aligned_cols=118 Identities=20% Similarity=0.318 Sum_probs=100.0
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCC--C-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCC
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGI--T-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSN 123 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 123 (259)
+..++..+++++.+|||+|||+|..+..+++... . +|+|+|+|+.|++.|++++...+.. +++++++|+.++++
T Consensus 60 i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-- 137 (261)
T 4gek_A 60 IGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-- 137 (261)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--
T ss_pred HHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--
Confidence 3445556788999999999999999999988632 2 8999999999999999998877654 59999999998875
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+.||+|+++.+++++ ...+...+|++++++|||||+|++.+...
T Consensus 138 ~~~d~v~~~~~l~~~-------------~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 138 ENASMVVLNFTLQFL-------------EPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp CSEEEEEEESCGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccceeeeeeeec-------------CchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 469999999999887 44677889999999999999999986543
No 4
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.80 E-value=5.9e-19 Score=142.18 Aligned_cols=135 Identities=24% Similarity=0.391 Sum_probs=106.5
Q ss_pred chhhhcCCCCcccccccchH-HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC
Q 025039 28 YWDERFSDEEHYEWLKDYSH-FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY 106 (259)
Q Consensus 28 ~w~~~~~~~~~~~w~~~~~~-~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 106 (259)
||+++|.... ..|...... +..++. .++++ +|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+.
T Consensus 1 ~W~~~y~~~~-~~~~~~~~~~l~~~~~-~~~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~ 76 (202)
T 2kw5_A 1 MWDERFSQSE-YVYGTEPNDFLVSVAN-QIPQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV 76 (202)
T ss_dssp CCCCCCCCCC-CCCCCCCCSSHHHHHH-HSCSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC
T ss_pred Chhhhhcccc-hhhccCchHHHHHHHH-hCCCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC
Confidence 6888887643 233333333 334433 45667 999999999999999999877 999999999999999999887765
Q ss_pred CCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 107 KEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 107 ~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
++.+.++|+.++++++++||+|++.. .++ ...+...+++++.++|+|||.+++.++....
T Consensus 77 -~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 77 -KITTVQSNLADFDIVADAWEGIVSIF--CHL-------------PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp -CEEEECCBTTTBSCCTTTCSEEEEEC--CCC-------------CHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred -ceEEEEcChhhcCCCcCCccEEEEEh--hcC-------------CHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 78999999988877778999999842 222 3467889999999999999999998876543
No 5
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=1.5e-19 Score=151.69 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=96.9
Q ss_pred hHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCc
Q 025039 46 SHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDC 125 (259)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 125 (259)
..+.+.+......+.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++ +++.+.++|+.++++++++
T Consensus 27 ~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~~~~~~s 99 (257)
T 4hg2_A 27 RALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH------PRVTYAVAPAEDTGLPPAS 99 (257)
T ss_dssp HHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC------TTEEEEECCTTCCCCCSSC
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc------CCceeehhhhhhhcccCCc
Confidence 345666666666778999999999999999999987 999999999999877542 5799999999999999999
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
||+|++..++|++ +..++++++.++|||||+|++..++..
T Consensus 100 fD~v~~~~~~h~~----------------~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 100 VDVAIAAQAMHWF----------------DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEEEECSCCTTC----------------CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ccEEEEeeehhHh----------------hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999999988765 345789999999999999999887654
No 6
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.79 E-value=8.9e-19 Score=140.40 Aligned_cols=133 Identities=20% Similarity=0.389 Sum_probs=109.7
Q ss_pred CCCccchhhhcCCCCcccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHh
Q 025039 23 YLDPHYWDERFSDEEHYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLL 102 (259)
Q Consensus 23 ~~~~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~ 102 (259)
+...+||+..|..... ...+...+. ..++.+|||+|||+|..+..+++.+. +++++|+|+.+++.+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~------~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~ 75 (199)
T 2xvm_A 5 IRDENYFTDKYELTRT------HSEVLEAVK--VVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKS 75 (199)
T ss_dssp CCCTTHHHHHHTCCCC------CHHHHHHTT--TSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHH
T ss_pred EechHHHhhhhccccc------cHHHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHH
Confidence 5668899998866432 233444443 23567999999999999999999977 99999999999999999988
Q ss_pred hcCCCCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 103 LKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 103 ~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..+.+++.+..+|+.++++ +++||+|++..+++++ ...+...+++++.++|+|||.++++++
T Consensus 76 ~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~-------------~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 76 IENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFL-------------EAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGS-------------CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhC-------------CHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 8887779999999988776 6789999999988876 334678899999999999999887654
No 7
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.79 E-value=1.7e-19 Score=146.11 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=94.6
Q ss_pred HHHhhcc-cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc------------CCCCeEEEEc
Q 025039 48 FRHLVQP-HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK------------GYKEVKVLEA 114 (259)
Q Consensus 48 ~~~~l~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~v~~~~~ 114 (259)
+..++.. .+.++.+|||+|||+|..+..+++.|. +|+|+|+|+.|++.|+++.... ...++++.++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 4444432 245788999999999999999999988 9999999999999999886531 1246899999
Q ss_pred ccCCCcCCC-CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 115 DMLDLPFSN-DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 115 d~~~~~~~~-~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
|+.++++.+ ++||+|++..+++++ +..+...+++++.++|||||++++++
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l-------------~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIAL-------------PADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGS-------------CHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ccccCCcccCCCEEEEEECcchhhC-------------CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 999988654 789999998888876 34567789999999999999955544
No 8
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.79 E-value=4.1e-19 Score=145.95 Aligned_cols=138 Identities=21% Similarity=0.424 Sum_probs=101.5
Q ss_pred CccchhhhcCCCCcccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc
Q 025039 25 DPHYWDERFSDEEHYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK 104 (259)
Q Consensus 25 ~~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 104 (259)
..+||+..+....... ..+...+...++++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...
T Consensus 2 ~~~yw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~ 75 (235)
T 3sm3_A 2 PESYWEKVSGKNIPSS-----LDLYPIIHNYLQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSP 75 (235)
T ss_dssp ---------------------CCCCTTHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCC
T ss_pred chhHHHHHhhccCCCH-----HHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhc
Confidence 3578988876432111 112223444566889999999999999999999977 9999999999999999998776
Q ss_pred CCC-----CeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 105 GYK-----EVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 105 ~~~-----~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++. ++.+.++|+..+++++++||+|++..+++++ .+......+++++.++|+|||++++.++.
T Consensus 76 ~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 76 GLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSV------------PDPKERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp SCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGC------------CCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCccccCcceEEEEecccccCCCCCceeEEEEcchhhcC------------CCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 652 4789999999888778899999999988877 24455669999999999999999998775
Q ss_pred C
Q 025039 180 Q 180 (259)
Q Consensus 180 ~ 180 (259)
.
T Consensus 144 ~ 144 (235)
T 3sm3_A 144 Q 144 (235)
T ss_dssp C
T ss_pred c
Confidence 4
No 9
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.78 E-value=6.3e-19 Score=145.48 Aligned_cols=140 Identities=19% Similarity=0.305 Sum_probs=110.7
Q ss_pred CccchhhhcCCCCccccc--ccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHh
Q 025039 25 DPHYWDERFSDEEHYEWL--KDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLL 102 (259)
Q Consensus 25 ~~~~w~~~~~~~~~~~w~--~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~ 102 (259)
+.++|+++|..... .|. .....+..++.....++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.+++++.
T Consensus 32 ~~~~w~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~ 109 (235)
T 3lcc_A 32 EEGGWEKCWEEEIT-PWDQGRATPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYG 109 (235)
T ss_dssp HHHHHHHHHHTTCC-TTCCSSCCHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHT
T ss_pred CHHHHHHHHhcCCC-CcccCCCCHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhh
Confidence 36799999976432 233 233455566654444556999999999999999988766 89999999999999999987
Q ss_pred hcCC-CCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 103 LKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 103 ~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
..+. .++++.++|+.+++ +.++||+|++..+++++ ...+...+++++.++|+|||.+++..+..
T Consensus 110 ~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 110 SSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAI-------------EPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp TSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTS-------------CGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcC-------------CHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 6432 35899999999876 45689999999988876 33577899999999999999999987754
No 10
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.77 E-value=1.5e-18 Score=145.31 Aligned_cols=108 Identities=19% Similarity=0.319 Sum_probs=96.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
..++.+|||+|||+|.++..+++.+. +++++|+|+.+++.+++++...+.+++.+.++|+.++++++++||+|++..++
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhh
Confidence 34788999999999999999999987 99999999999999999998888778999999999988888899999999998
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+++ .+...++.++.++|||||.+++.++.
T Consensus 114 ~~~---------------~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 114 HHF---------------PNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp GGC---------------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Hhc---------------CCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 877 45679999999999999999997543
No 11
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=2.8e-18 Score=139.63 Aligned_cols=141 Identities=17% Similarity=0.294 Sum_probs=110.5
Q ss_pred CCccchhhhcCCCCcccccccc---hHHHHhhccc--CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHH
Q 025039 24 LDPHYWDERFSDEEHYEWLKDY---SHFRHLVQPH--IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQ 98 (259)
Q Consensus 24 ~~~~~w~~~~~~~~~~~w~~~~---~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~ 98 (259)
.+.++|++.|...+.+.+...+ ..+..++... ..++.+|||+|||+|..+..+++.+. +++++|+++.+++.++
T Consensus 12 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~ 90 (216)
T 3ofk_A 12 NTYQSLERELANDDPWRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRAC 90 (216)
T ss_dssp SHHHHHHHHHTSSSGGGTTTCHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHH
T ss_pred chHHHHHHHhcCCCCcccccCHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHH
Confidence 3467899988775443332221 1233333322 34568999999999999999999986 9999999999999999
Q ss_pred HHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 99 ERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 99 ~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++...+ ++++.++|+.+++ ++++||+|++..+++++ .+......+++++.++|+|||.+++.++
T Consensus 91 ~~~~~~~--~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 91 QRTKRWS--HISWAATDILQFS-TAELFDLIVVAEVLYYL------------EDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp HHTTTCS--SEEEEECCTTTCC-CSCCEEEEEEESCGGGS------------SSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HhcccCC--CeEEEEcchhhCC-CCCCccEEEEccHHHhC------------CCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9987543 7999999999877 56899999999999887 2446678899999999999999999765
Q ss_pred CC
Q 025039 179 GQ 180 (259)
Q Consensus 179 ~~ 180 (259)
..
T Consensus 156 ~~ 157 (216)
T 3ofk_A 156 RD 157 (216)
T ss_dssp CH
T ss_pred CC
Confidence 43
No 12
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=2.3e-18 Score=144.50 Aligned_cols=135 Identities=19% Similarity=0.257 Sum_probs=109.5
Q ss_pred ccchhhhcCCCCcccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC
Q 025039 26 PHYWDERFSDEEHYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG 105 (259)
Q Consensus 26 ~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 105 (259)
.++|+..+.... ..|......+..++...++++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.|++++.
T Consensus 19 a~~yd~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~--- 93 (263)
T 3pfg_A 19 AELYDLVHQGKG-KDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP--- 93 (263)
T ss_dssp HHHHHHHHHHTT-CCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT---
T ss_pred HHHHHHHhhcCC-CCHHHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC---
Confidence 567777775321 1233334456666666667789999999999999999999987 89999999999999998853
Q ss_pred CCCeEEEEcccCCCcCCCCceeEEEecc-eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 106 YKEVKVLEADMLDLPFSNDCFDVVIEKA-TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 106 ~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++.++++|+.++++ +++||+|++.. +++++ .+..+...+++++.++|+|||.+++..+..
T Consensus 94 --~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~------------~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 94 --DAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHL------------AGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp --TSEEEECCTTTCCC-SCCEEEEEECTTGGGGS------------CHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred --CCEEEECChHHCCc-cCCcCEEEEcCchhhhc------------CCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 68999999998876 67999999997 88877 355688899999999999999999976544
No 13
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.76 E-value=1.9e-18 Score=142.93 Aligned_cols=116 Identities=26% Similarity=0.445 Sum_probs=100.4
Q ss_pred hHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCc
Q 025039 46 SHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDC 125 (259)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 125 (259)
..+...+...++++.+|||+|||+|..+..+++.+. +++++|+++.+++.++++.. ..++.++++|+.++++++++
T Consensus 41 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~ 116 (242)
T 3l8d_A 41 STIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE---GPDLSFIKGDLSSLPFENEQ 116 (242)
T ss_dssp TTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC---BTTEEEEECBTTBCSSCTTC
T ss_pred HHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc---cCCceEEEcchhcCCCCCCC
Confidence 356666676777889999999999999999999977 99999999999999998752 24689999999998887889
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
||+|++..+++++ .+...+++++.++|+|||++++.++..
T Consensus 117 fD~v~~~~~l~~~---------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 117 FEAIMAINSLEWT---------------EEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp EEEEEEESCTTSS---------------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ccEEEEcChHhhc---------------cCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 9999999988776 455689999999999999999987654
No 14
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.76 E-value=6.9e-18 Score=138.04 Aligned_cols=122 Identities=25% Similarity=0.356 Sum_probs=103.7
Q ss_pred chHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCC
Q 025039 45 YSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSND 124 (259)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 124 (259)
...+...+...++++.+|||+|||+|..+..+++.++ +++++|+|+.+++.+++++...+ .++++.++|+.+++++++
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSCTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCCCC
Confidence 3445566666677789999999999999999999988 99999999999999999987766 579999999988777778
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+||+|+++.++++. +..+...+++++.++|+|||.+++.++...
T Consensus 103 ~~D~v~~~~~~~~~-------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 146 (227)
T 1ve3_A 103 TFDYVIFIDSIVHF-------------EPLELNQVFKEVRRVLKPSGKFIMYFTDLR 146 (227)
T ss_dssp CEEEEEEESCGGGC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred cEEEEEEcCchHhC-------------CHHHHHHHHHHHHHHcCCCcEEEEEecChH
Confidence 99999999885433 346788999999999999999999877643
No 15
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.76 E-value=3.2e-18 Score=141.85 Aligned_cols=110 Identities=17% Similarity=0.246 Sum_probs=94.7
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
++.+|||+|||+|..+..+++.+..+++++|+++.+++.+++++...+..++.+..+|+.++++++++||+|++..++++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999998887559999999999999999998766434588999999888777778999999998887
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+ .......+++++.++|+|||++++.++..
T Consensus 159 ~-------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 159 L-------------TDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 7 33456799999999999999999977543
No 16
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.75 E-value=2.5e-18 Score=142.24 Aligned_cols=135 Identities=18% Similarity=0.202 Sum_probs=96.2
Q ss_pred CccchhhhcCCCCc-ccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh
Q 025039 25 DPHYWDERFSDEEH-YEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL 103 (259)
Q Consensus 25 ~~~~w~~~~~~~~~-~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~ 103 (259)
+.+||+.....-.. .........+...+... .++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.|++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~ 86 (250)
T 2p7i_A 9 DQEIKDTAGHKYAYNFDFDVMHPFMVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD 86 (250)
T ss_dssp --------------CHHHHTHHHHHHHHHGGG-CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS
T ss_pred CHHHHhhHHHHhcCccchhhHHHHHHHHHHhh-cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC
Confidence 35677765544211 00011122344444433 3677999999999999999999988 899999999999999998653
Q ss_pred cCCCCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHH-hcccCCcEEEEEecCCc
Q 025039 104 KGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVH-RVLKPDGLFISVSFGQP 181 (259)
Q Consensus 104 ~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~ 181 (259)
++.+.++|+.++ .++++||+|++..+++++ .+...+++++. ++|||||.+++.++...
T Consensus 87 ----~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~---------------~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 87 ----GITYIHSRFEDA-QLPRRYDNIVLTHVLEHI---------------DDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp ----CEEEEESCGGGC-CCSSCEEEEEEESCGGGC---------------SSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred ----CeEEEEccHHHc-CcCCcccEEEEhhHHHhh---------------cCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 689999999887 356899999999999877 35579999999 99999999999886653
No 17
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=8.5e-18 Score=140.27 Aligned_cols=107 Identities=21% Similarity=0.298 Sum_probs=96.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++.++.+++|+|+|+.+++.+++++...++++ +++.++|+.++++++++||+|++..+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 45778999999999999999999976699999999999999999999888766 99999999988888889999999998
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++++ +...+++++.++|+|||++++.++
T Consensus 124 l~~~----------------~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 124 IYNI----------------GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp SCCC----------------CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Hhhc----------------CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 8765 356899999999999999999874
No 18
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.75 E-value=4e-18 Score=142.11 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=93.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
++.+|||+|||+|..+..+++.+..+++|+|+|+.+++.+++++. ..++.+.++|+.++++++++||+|++..++++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCeEEEEEchhhhh
Confidence 678999999999999999999987689999999999999999876 24689999999988887889999999998887
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+ .+...+++++.++|+|||.+++....
T Consensus 121 ~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 121 I---------------ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp C---------------SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred h---------------hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 6 45689999999999999999997654
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=5.2e-18 Score=140.50 Aligned_cols=109 Identities=24% Similarity=0.337 Sum_probs=98.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+.+++.+.++|+.++++++++||+|++..++
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCch
Confidence 56789999999999999999999987 99999999999999999998888778999999999888888899999999888
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++ .+...++.++.++|+|||.+++.++..
T Consensus 98 ~~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 98 HHF---------------SDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGC---------------SCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhc---------------cCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 776 356789999999999999999986543
No 20
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.75 E-value=4.7e-18 Score=144.24 Aligned_cols=116 Identities=17% Similarity=0.306 Sum_probs=99.1
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCc-CCCCc
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-FSNDC 125 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~-~~~~~ 125 (259)
+..++.....++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.+++++...++ +++.++++|+.+++ +.+++
T Consensus 58 l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 136 (285)
T 4htf_A 58 LDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETP 136 (285)
T ss_dssp HHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSC
T ss_pred HHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCC
Confidence 3344544445578999999999999999999977 999999999999999999988887 46999999998876 66789
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
||+|++..+++++ .+...+++++.++|+|||++++..+.
T Consensus 137 fD~v~~~~~l~~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 137 VDLILFHAVLEWV---------------ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEEEEEESCGGGC---------------SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred ceEEEECchhhcc---------------cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 9999999999876 35578999999999999999998764
No 21
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=5.9e-18 Score=137.88 Aligned_cols=110 Identities=23% Similarity=0.334 Sum_probs=98.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcC-CC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++.+ +. +++++|+++.+++.+++++...+++++.+..+|+.++++++++||+|++..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 4578899999999999999999986 43 999999999999999999988888789999999998887788999999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++++ .+...+++++.++|+|||.+++.++..
T Consensus 115 ~l~~~---------------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 115 TFHEL---------------SEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp CGGGC---------------SSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred hhhhc---------------CCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 98776 456789999999999999999987653
No 22
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.74 E-value=8.7e-18 Score=143.34 Aligned_cols=109 Identities=19% Similarity=0.379 Sum_probs=96.9
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
.+.++.+|||+|||+|..+..+++. +. +++|+|+|+.+++.+++++...++. ++++.++|+.++++++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 3467889999999999999999987 65 9999999999999999998887764 5999999999988888899999999
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.+++++ .+...+++++.++|||||++++.++.
T Consensus 158 ~~l~~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 158 DAFLHS---------------PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp SCGGGC---------------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhhc---------------CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 998877 34689999999999999999998764
No 23
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.74 E-value=7.9e-18 Score=142.07 Aligned_cols=118 Identities=31% Similarity=0.470 Sum_probs=101.7
Q ss_pred hHHHHhhcc--cCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCC
Q 025039 46 SHFRHLVQP--HIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS 122 (259)
Q Consensus 46 ~~~~~~l~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 122 (259)
..+..++.. .+.++.+|||+|||+|..+..+++.++. +++++|+++.+++.+++++...+.+++.+..+|+.+++++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFE 102 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSC
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCC
Confidence 344555443 3467899999999999999999998654 9999999999999999999888887899999999998887
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++||+|++..+++++ .+...+++++.++|+|||++++.+.
T Consensus 103 ~~~fD~v~~~~~l~~~---------------~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHL---------------QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp TTCEEEEEEESCGGGC---------------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEEechhhhc---------------CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 8899999999998876 3456899999999999999999764
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.74 E-value=2.2e-17 Score=134.49 Aligned_cols=109 Identities=20% Similarity=0.279 Sum_probs=94.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-----CeEEEEcccCCCcCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-----EVKVLEADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~~~fD~V~ 130 (259)
.++.+|||+|||+|.++..+++.++. +++|+|+|+.+++.+++++...+++ ++.+.++|+...+.+.++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 36789999999999999999998764 9999999999999999998877665 69999999977666667999999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+..+++++ ...+...+++++.++|||||++++...
T Consensus 108 ~~~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHL-------------DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGC-------------CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcC-------------CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 99999887 445678999999999999997776543
No 25
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.74 E-value=2.4e-18 Score=144.72 Aligned_cols=143 Identities=20% Similarity=0.251 Sum_probs=104.8
Q ss_pred CCCccchhhhcCCCCcc-------cccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHH
Q 025039 23 YLDPHYWDERFSDEEHY-------EWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVE 95 (259)
Q Consensus 23 ~~~~~~w~~~~~~~~~~-------~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~ 95 (259)
|....||+..|...... .|.. ..+..++.....++.+|||+|||+|..+..++..+..+|+|+|+|+.|++
T Consensus 15 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~ 92 (263)
T 2a14_A 15 FLPRDYLATYYSFDGSPSPEAEMLKFNL--ECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNRE 92 (263)
T ss_dssp CCHHHHHHHHCCCCCSCCHHHHHHHHHH--HHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHH
T ss_pred cCHHHHHHHhcCCCcccchhhHHHHHHH--HHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHH
Confidence 45578999988764322 1221 23334443344567899999999999988888777658999999999999
Q ss_pred HHHHHHhhcC--C---------------------------CCeE-EEEcccCCC-cC---CCCceeEEEecceeeeeeeC
Q 025039 96 KMQERLLLKG--Y---------------------------KEVK-VLEADMLDL-PF---SNDCFDVVIEKATMEVLFVN 141 (259)
Q Consensus 96 ~a~~~~~~~~--~---------------------------~~v~-~~~~d~~~~-~~---~~~~fD~V~~~~~l~~~~~~ 141 (259)
.|+++++... + .++. +.++|+.+. ++ ..++||+|+++.+++++.
T Consensus 93 ~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~-- 170 (263)
T 2a14_A 93 ELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECAC-- 170 (263)
T ss_dssp HHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC--
T ss_pred HHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhc--
Confidence 9998765431 0 0233 788998873 32 256899999999998752
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 142 SGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+.++...+++++.++|||||.|++.+.
T Consensus 171 ---------~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 171 ---------CSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp ---------SSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---------CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1346788999999999999999999864
No 26
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.74 E-value=1.9e-17 Score=134.95 Aligned_cols=103 Identities=21% Similarity=0.282 Sum_probs=90.6
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
++.+|||+|||+|..+..+++.+. +++|+|+++.+++.+++++. .++.+.++|+.+++.+ ++||+|++..++++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 678999999999999999999977 99999999999999999865 3689999999998876 89999999999988
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+ .......+++++.++|||||.+++.++.
T Consensus 119 ~-------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 119 L-------------TDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp S-------------CHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred C-------------ChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 7 3344456999999999999999998744
No 27
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=1.3e-17 Score=134.41 Aligned_cols=104 Identities=16% Similarity=0.222 Sum_probs=92.7
Q ss_pred CCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeeee
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 138 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~ 138 (259)
+.+|||+|||+|..+..+++.+. +++|+|+++.+++.++++. +++.++++|+.++++++++||+|++..+++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGGGGSCCCEEEEEEESSSTTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----CCCeEEeCcccccccCCCCeEEEEehhhHhcC
Confidence 78999999999999999999977 9999999999999999873 47899999999888778899999999988876
Q ss_pred eeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 139 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
..++...+++++.++|+|||.+++..+...
T Consensus 116 -------------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 116 -------------GPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp -------------CTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred -------------CHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 234778999999999999999999876654
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.74 E-value=1.8e-17 Score=138.64 Aligned_cols=109 Identities=20% Similarity=0.347 Sum_probs=96.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.+++++... +++++.++|+.++++++++||+|++..+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPENNFDLIYSRDA 129 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCTTCEEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCCCcEEEEeHHHH
Confidence 457789999999999999999997 55 9999999999999999987654 5799999999998887889999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++++ +..+...+++++.++|+|||.+++.++..
T Consensus 130 l~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 130 ILAL-------------SLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHhc-------------ChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 8876 44788999999999999999999987643
No 29
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.74 E-value=2.2e-17 Score=131.12 Aligned_cols=124 Identities=13% Similarity=0.128 Sum_probs=94.3
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-CCCCce
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCF 126 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~f 126 (259)
...++...+.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|++++...+++++++++.+...+. +.+++|
T Consensus 12 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~f 90 (185)
T 3mti_A 12 SHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPI 90 (185)
T ss_dssp HHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCE
T ss_pred HHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCc
Confidence 3445556677899999999999999999999855 99999999999999999999888877999987776643 346789
Q ss_pred eEEEecc-eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 127 DVVIEKA-TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 127 D~V~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+|+++. .+... ...+ .........+++++.++|||||.++++.+.
T Consensus 91 D~v~~~~~~~~~~----~~~~---~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 91 RAAIFNLGYLPSA----DKSV---ITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEEEEC------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CEEEEeCCCCCCc----chhc---ccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 9998762 22110 0000 012356678899999999999999998775
No 30
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.74 E-value=1.2e-17 Score=140.63 Aligned_cols=109 Identities=27% Similarity=0.423 Sum_probs=95.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++....+++++|+|+.+++.+++++...+.+ ++.+..+|+.++++++++||+|++..+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 3578899999999999999998864339999999999999999998887765 499999999998888889999999998
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++++ .+...+++++.++|+|||.+++.++.
T Consensus 139 l~~~---------------~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 139 LHHM---------------PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTTS---------------SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhC---------------CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 8776 34578999999999999999998754
No 31
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=1.4e-17 Score=142.47 Aligned_cols=119 Identities=19% Similarity=0.286 Sum_probs=97.7
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC---CCeEEEEcccCCCcCCCCce
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY---KEVKVLEADMLDLPFSNDCF 126 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~f 126 (259)
.++.....++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.+++++...+. .+++++++|+.++++ +++|
T Consensus 74 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f 151 (299)
T 3g2m_A 74 EFATRTGPVSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRF 151 (299)
T ss_dssp HHHHHHCCCCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCE
T ss_pred HHHHhhCCCCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCc
Confidence 33333334456999999999999999999987 899999999999999999887653 469999999999876 5789
Q ss_pred eEEEec-ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccc
Q 025039 127 DVVIEK-ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHF 183 (259)
Q Consensus 127 D~V~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 183 (259)
|+|++. .+++++ +..+...+++++.++|+|||.|++.++.....
T Consensus 152 D~v~~~~~~~~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 152 GTVVISSGSINEL-------------DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp EEEEECHHHHTTS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred CEEEECCcccccC-------------CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 998865 555544 44678899999999999999999998876543
No 32
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=1.5e-17 Score=139.76 Aligned_cols=107 Identities=19% Similarity=0.297 Sum_probs=95.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++.+..+|+|+|+|+.+++.+++++...++++ +++.++|+.++++++++||+|++..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 46789999999999999999999854499999999999999999998888754 99999999998877889999999998
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++++ +...+++++.++|+|||++++.++
T Consensus 124 ~~~~----------------~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 124 IYNI----------------GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp GGGT----------------CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ceec----------------CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8765 457899999999999999999875
No 33
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=2.2e-17 Score=140.22 Aligned_cols=105 Identities=18% Similarity=0.265 Sum_probs=94.4
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.+++++...++ ++++.++|+.+.+. .++||+|+++.++++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc-cCCccEEEEccchhh
Confidence 678999999999999999999987 999999999999999999988886 89999999988776 678999999999987
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+ +.+....+++++.++|+|||.++++..
T Consensus 197 ~-------------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 197 L-------------NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp S-------------CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 7 445678999999999999999887654
No 34
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.73 E-value=1.9e-17 Score=138.00 Aligned_cols=107 Identities=21% Similarity=0.238 Sum_probs=93.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++....+++|+|+|+.+++.+++++...++. ++.+.++|+.++++ +++||+|++..+
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 4678899999999999999999874339999999999999999999888775 69999999998876 689999999888
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++++ .+...+++++.++|||||.+++.+.
T Consensus 113 ~~~~---------------~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 113 TWIA---------------GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp GGGT---------------SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hHhc---------------CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 8765 3567899999999999999999764
No 35
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.73 E-value=3.2e-17 Score=134.94 Aligned_cols=109 Identities=25% Similarity=0.351 Sum_probs=95.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
..++.+|||+|||+|..+..+++..+. +++++|+|+.+++.+++++...+ ++.+.++|+.+++++ ++||+|++..+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~ 118 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE-EKYDMVVSALS 118 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC-SCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC-CCceEEEEeCc
Confidence 456789999999999999999998544 99999999999999999987654 799999999998866 89999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++++ ......++++++.++|+|||.+++.++..
T Consensus 119 l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 119 IHHL-------------EDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred cccC-------------CHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9887 34555689999999999999999987654
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=3.4e-17 Score=133.51 Aligned_cols=109 Identities=19% Similarity=0.320 Sum_probs=93.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-----CeEEEEcccCCCcCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-----EVKVLEADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~~~fD~V~ 130 (259)
.++.+|||+|||+|..+..+++.++. +++|+|+|+.+++.+++++...+++ ++++.++|+...+...++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 36789999999999999999998764 9999999999999999998776654 68999999977776678999999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+..+++++ ...+...+++++.++|+|||+++....
T Consensus 108 ~~~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 108 VIEVIEHL-------------DENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EESCGGGC-------------CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EHHHHHhC-------------CHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 99999887 445668999999999999997766543
No 37
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.73 E-value=1.8e-17 Score=137.88 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=94.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|..+..+++.+..+++++|+++.+++.+++++... +++.+.++|+.++++++++||+|++..+++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 467899999999999999999887548999999999999999987654 468999999988887778999999999988
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++ ...+...+++++.++|+|||++++.+.
T Consensus 170 ~~-------------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 170 YL-------------TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp GS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hC-------------CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 76 346788999999999999999999875
No 38
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.72 E-value=3.6e-17 Score=136.72 Aligned_cols=105 Identities=24% Similarity=0.364 Sum_probs=93.1
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.+.++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.+++++ ....+++.+.++|+.++++++++||+|++..+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 456788999999999999999999876 9999999999999999987 33445799999999888877889999999998
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
++++ .+...+++++.++|+|||.+++.
T Consensus 114 l~~~---------------~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLV---------------PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGC---------------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhc---------------CCHHHHHHHHHHHCCCCcEEEEE
Confidence 8876 45678999999999999999987
No 39
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.72 E-value=1.8e-17 Score=134.48 Aligned_cols=105 Identities=16% Similarity=0.301 Sum_probs=92.6
Q ss_pred CCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
+.+|||+|||+|..+..+++....+++++|+++.+++.+++++...+.. ++++.++|+.++++++++||+|++..++++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 3499999999999999999882229999999999999999999888765 599999999998888889999999998887
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+ .+...+++++.++|+|||.+++.+.
T Consensus 124 ~---------------~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 124 W---------------EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp C---------------SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred c---------------cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 6 4567899999999999999999753
No 40
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.72 E-value=4.9e-17 Score=132.05 Aligned_cols=114 Identities=19% Similarity=0.223 Sum_probs=96.6
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCcee
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFD 127 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 127 (259)
+...+. .+.++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++ .+.+++.+.++|+.++ +++++||
T Consensus 37 ~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~-~~~~~~D 109 (218)
T 3ou2_A 37 ALERLR-AGNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW-TPDRQWD 109 (218)
T ss_dssp HHHHHT-TTTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC-CCSSCEE
T ss_pred HHHHHh-cCCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC-CCCCcee
Confidence 334433 355678999999999999999999977 99999999999999987 3546799999999887 5678999
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+|++..+++++ ..+....+++++.++|+|||.+++.++..+
T Consensus 110 ~v~~~~~l~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 110 AVFFAHWLAHV-------------PDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EEEEESCGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EEEEechhhcC-------------CHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 99999999887 334568999999999999999999987763
No 41
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=4.2e-17 Score=134.74 Aligned_cols=118 Identities=18% Similarity=0.228 Sum_probs=99.5
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCcee
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFD 127 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 127 (259)
+..++.....++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+. ++.+.++|+.+++++ ++||
T Consensus 27 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-~~fD 103 (246)
T 1y8c_A 27 IIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNIN-RKFD 103 (246)
T ss_dssp HHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCS-CCEE
T ss_pred HHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCcc-CCce
Confidence 4444444434678999999999999999999977 899999999999999999887664 789999999887766 7899
Q ss_pred EEEecc-eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 128 VVIEKA-TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 128 ~V~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|++.. +++++ .+..+...+++++.++|+|||.+++..+..
T Consensus 104 ~v~~~~~~l~~~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 104 LITCCLDSTNYI------------IDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp EEEECTTGGGGC------------CSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred EEEEcCcccccc------------CCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 999998 88876 244678899999999999999999866543
No 42
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.72 E-value=1.1e-16 Score=131.27 Aligned_cols=151 Identities=14% Similarity=0.096 Sum_probs=121.7
Q ss_pred hhcccCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeE
Q 025039 51 LVQPHIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDV 128 (259)
Q Consensus 51 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~ 128 (259)
.+..+++++.+|||+|||+|.+++.++..++. +|+++|+++.+++.|+++++.+++.+ +++.++|..+...+.+.||+
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~ 93 (230)
T 3lec_A 14 KVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDT 93 (230)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCE
T ss_pred HHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCE
Confidence 34557788899999999999999999999876 89999999999999999999999865 99999999885544447999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCCCCcEEEEEEeCCeEEE
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHY 208 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
|+..++. -....+++....+.|+++|.|++...........++...+|....+.....++..|
T Consensus 94 IviaGmG-----------------g~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Y 156 (230)
T 3lec_A 94 ITICGMG-----------------GRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAANDFEIVAEDILTENDKRY 156 (230)
T ss_dssp EEEEEEC-----------------HHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEEEC--CEE
T ss_pred EEEeCCc-----------------hHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHCCCEEEEEEEEEECCEEE
Confidence 8865542 25577899999999999999999887666566667777877777777667777777
Q ss_pred EEEEEEeCCC
Q 025039 209 FFYILRKGKR 218 (259)
Q Consensus 209 ~~~~~~~~~~ 218 (259)
....+.++..
T Consensus 157 eii~~~~~~~ 166 (230)
T 3lec_A 157 EILVVKHGHM 166 (230)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEeCCC
Confidence 7777776643
No 43
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.72 E-value=4.6e-17 Score=131.53 Aligned_cols=113 Identities=20% Similarity=0.314 Sum_probs=95.5
Q ss_pred cCCCCCcEEEEcCCCCcch-HHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 55 HIKPNSSVLELGCGNSRLS-EGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~-~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
...++.+|||+|||+|..+ ..++..+. +++++|+|+.+++.+++++...+ .++.+.++|+.++++++++||+|++..
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPFKDESMSFVYSYG 97 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCSCTTCEEEEEECS
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCCCCCceeEEEEcC
Confidence 3456789999999999985 45555565 99999999999999999987666 468899999998887778999999998
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
+++++ ...+...+++++.++|+|||++++.+++.+.
T Consensus 98 ~l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 98 TIFHM-------------RKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp CGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred hHHhC-------------CHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 88776 3478889999999999999999998876543
No 44
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1.5e-17 Score=137.97 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=93.9
Q ss_pred cccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-----Ccee
Q 025039 53 QPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-----DCFD 127 (259)
Q Consensus 53 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~fD 127 (259)
...+.++.+|||+|||+|..+..+++.+. +|+++|+|+.+++.+++++.. .+++++++|+.+++... ..||
T Consensus 51 ~~~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 51 ELLFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA---ANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp TTTSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC---TTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred hhccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc---cCceEEECcccccccccccccccCcc
Confidence 34467789999999999999999999988 999999999999999998732 36899999998854321 2489
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+|++..+++++ ...+...+++++.++|||||++++.++...
T Consensus 127 ~v~~~~~~~~~-------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 127 NIYMRTGFHHI-------------PVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EEEEESSSTTS-------------CGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EEEEcchhhcC-------------CHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 99999988876 334778999999999999999999887643
No 45
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.72 E-value=3.4e-17 Score=132.76 Aligned_cols=111 Identities=23% Similarity=0.373 Sum_probs=95.0
Q ss_pred HHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCce
Q 025039 47 HFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCF 126 (259)
Q Consensus 47 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 126 (259)
.+..++. .++++.+|||+|||+|..+..+++.+. +++++|+|+.+++.+++++ ++.+..+|+..++ .+++|
T Consensus 33 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-~~~~f 103 (211)
T 3e23_A 33 TLTKFLG-ELPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-AIDAY 103 (211)
T ss_dssp HHHHHHT-TSCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC-CCSCE
T ss_pred HHHHHHH-hcCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc------CCceEEeeeccCC-CCCcE
Confidence 3444443 466789999999999999999999977 9999999999999999986 4567788888877 67899
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+|++..+++++ ..++...+++++.++|+|||++++....
T Consensus 104 D~v~~~~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 104 DAVWAHACLLHV-------------PRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEEEECSCGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEecCchhhc-------------CHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999999887 4468889999999999999999998654
No 46
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.72 E-value=4.6e-17 Score=129.61 Aligned_cols=112 Identities=21% Similarity=0.333 Sum_probs=94.8
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEE
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVV 129 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 129 (259)
.++...++++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++ +++.+.++|+.++++++++||+|
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCCCCEEEE
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCCCceeEE
Confidence 34455567889999999999999999999876 9999999999999999875 35889999998877777899999
Q ss_pred Eec-ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 130 IEK-ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 130 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++. .+++++ ...+...+++++.++|+|||.+++.....
T Consensus 112 ~~~~~~~~~~-------------~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 112 VSAGNVMGFL-------------AEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EECCCCGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EECCcHHhhc-------------ChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 998 566654 34677899999999999999999976554
No 47
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=4.2e-17 Score=130.21 Aligned_cols=110 Identities=12% Similarity=0.133 Sum_probs=94.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.+++++...++++++++++|+.++. +++++||+|+++.+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 4678999999999999998888876689999999999999999999888877999999998753 34678999999887
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHh--cccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHR--VLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~ 180 (259)
+++. ..+...++..+.+ +|+|||++++.....
T Consensus 123 ~~~~--------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVD--------------SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSC--------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcc--------------hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 6432 2677889999999 999999999976554
No 48
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.71 E-value=2e-17 Score=140.77 Aligned_cols=140 Identities=19% Similarity=0.281 Sum_probs=103.3
Q ss_pred ccchhhhcCCCCcccccccchHHHHhhcccC--CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh
Q 025039 26 PHYWDERFSDEEHYEWLKDYSHFRHLVQPHI--KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL 103 (259)
Q Consensus 26 ~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~ 103 (259)
.++|+..+..... ....+...+...+ .++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|++++..
T Consensus 28 ~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~ 101 (293)
T 3thr_A 28 ARVWQLYIGDTRS-----RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWN 101 (293)
T ss_dssp HHHHHHHHTCCSC-----BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcc-----hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhh
Confidence 4578777643221 1222223332222 3678999999999999999999988 999999999999999987633
Q ss_pred cC----CCCeEEEEcccCCCc---CCCCceeEEEec-ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 104 KG----YKEVKVLEADMLDLP---FSNDCFDVVIEK-ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 104 ~~----~~~v~~~~~d~~~~~---~~~~~fD~V~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
.+ ..++.+..+|+.+++ +++++||+|+|. .+++++... ....++...+++++.++|||||++++
T Consensus 102 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~--------~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 102 RRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDS--------KGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp TTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCS--------SSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCcc--------ccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 22 235788899988876 677899999998 788777110 00136688999999999999999999
Q ss_pred EecC
Q 025039 176 VSFG 179 (259)
Q Consensus 176 ~~~~ 179 (259)
..++
T Consensus 174 ~~~~ 177 (293)
T 3thr_A 174 DHRN 177 (293)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 8754
No 49
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.71 E-value=1.6e-16 Score=130.46 Aligned_cols=127 Identities=12% Similarity=0.118 Sum_probs=95.0
Q ss_pred hcccCCCCCcEEEEcCC-CCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-cCCCCceeE
Q 025039 52 VQPHIKPNSSVLELGCG-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-PFSNDCFDV 128 (259)
Q Consensus 52 l~~~~~~~~~vLDiGcG-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 128 (259)
+...++++.+|||+||| +|..+..+++. +. +|+++|+++.+++.|++++...+. +++++++|+..+ ++++++||+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCCSCEEE
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcccCceeE
Confidence 34556788999999999 99999999998 44 999999999999999999998887 899999997543 344578999
Q ss_pred EEecceeeeeeeC----CCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 129 VIEKATMEVLFVN----SGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 129 V~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
|+++.++...-.. ....|............+++.+.++|+|||+++++....
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 9998877543110 000011111223445889999999999999999976554
No 50
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.71 E-value=8.5e-17 Score=136.84 Aligned_cols=117 Identities=22% Similarity=0.282 Sum_probs=99.7
Q ss_pred ccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcC-CCCceeEEEe
Q 025039 54 PHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPF-SNDCFDVVIE 131 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~-~~~~fD~V~~ 131 (259)
..+.++.+|||+|||+|..+..+++.+..+++|+|+|+.+++.+++++...+.. ++.+.++|+.+.++ ++++||+|++
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 60 LYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp HHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred HhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 445788999999999999999998887559999999999999999998877653 48999999998776 5789999999
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
..++++.+ .+..+...+++++.++|+|||.+++.++...
T Consensus 140 ~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 178 (298)
T 1ri5_A 140 QFSFHYAF-----------STSESLDIAQRNIARHLRPGGYFIMTVPSRD 178 (298)
T ss_dssp ESCGGGGG-----------SSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred Cchhhhhc-----------CCHHHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 98887631 1457889999999999999999999887643
No 51
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.71 E-value=1.8e-16 Score=129.65 Aligned_cols=149 Identities=17% Similarity=0.157 Sum_probs=118.7
Q ss_pred hcccCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCC-CcCCCCceeE
Q 025039 52 VQPHIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLD-LPFSNDCFDV 128 (259)
Q Consensus 52 l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~-~~~~~~~fD~ 128 (259)
+...++++.+|||+|||+|.+++.++..++. +|+++|+++.+++.|+++++.+++.+ +++..+|..+ ++ +...||+
T Consensus 9 l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~-~~~~~D~ 87 (225)
T 3kr9_A 9 VASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE-ETDQVSV 87 (225)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC-GGGCCCE
T ss_pred HHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc-cCcCCCE
Confidence 3456778899999999999999999999876 89999999999999999999999875 9999999865 32 2236999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCCCCcEEEEEEeCCeEEE
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHY 208 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
|+..++- -....+++......|+|+|++++...........++...+|....+.....++..|
T Consensus 88 IviaG~G-----------------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Y 150 (225)
T 3kr9_A 88 ITIAGMG-----------------GRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAESILEEAGKFY 150 (225)
T ss_dssp EEEEEEC-----------------HHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEEEETTEEE
T ss_pred EEEcCCC-----------------hHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCEEE
Confidence 8865542 24568899999999999999999776555555566777777766666666677777
Q ss_pred EEEEEEeCCC
Q 025039 209 FFYILRKGKR 218 (259)
Q Consensus 209 ~~~~~~~~~~ 218 (259)
....+.++..
T Consensus 151 eii~~~~~~~ 160 (225)
T 3kr9_A 151 EILVVEAGQM 160 (225)
T ss_dssp EEEEEEESCC
T ss_pred EEEEEEeCCC
Confidence 7777776643
No 52
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.71 E-value=2.6e-17 Score=137.72 Aligned_cols=145 Identities=13% Similarity=0.179 Sum_probs=105.2
Q ss_pred CCCccchhhhcCCCCcccc---cccc--hHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHH
Q 025039 23 YLDPHYWDERFSDEEHYEW---LKDY--SHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKM 97 (259)
Q Consensus 23 ~~~~~~w~~~~~~~~~~~w---~~~~--~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a 97 (259)
|...+||+..|........ ...+ ..+..++.....++.+|||+|||+|..+..++..+..+|+++|+|+.+++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a 95 (265)
T 2i62_A 16 FNPRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWEL 95 (265)
T ss_dssp CCHHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHH
T ss_pred cCHHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHH
Confidence 3446788888866432211 1111 1222333333346789999999999999999888766899999999999999
Q ss_pred HHHHhhcCC-----------------------------CCe-EEEEcccCCCc-CCC---CceeEEEecceeeeeeeCCC
Q 025039 98 QERLLLKGY-----------------------------KEV-KVLEADMLDLP-FSN---DCFDVVIEKATMEVLFVNSG 143 (259)
Q Consensus 98 ~~~~~~~~~-----------------------------~~v-~~~~~d~~~~~-~~~---~~fD~V~~~~~l~~~~~~~~ 143 (259)
++++...+. .++ .+..+|+.+.. .+. ++||+|++..+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~---- 171 (265)
T 2i62_A 96 QKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC---- 171 (265)
T ss_dssp HHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC----
T ss_pred HHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc----
Confidence 998765320 016 88999998754 244 7899999999887541
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 144 DPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
....+...+++++.++|+|||.+++.+.
T Consensus 172 -------~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 172 -------PDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp -------SSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -------CChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 1346788999999999999999999764
No 53
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=4.9e-17 Score=139.91 Aligned_cols=107 Identities=18% Similarity=0.287 Sum_probs=96.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++. +. +|+|+|+++.+++.|++++...++. ++++.++|+.++++++++||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 457889999999999999999988 65 8999999999999999999988876 59999999999888888999999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+++++ +...+++++.++|||||++++.++.
T Consensus 194 ~l~~~----------------~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 194 STMYV----------------DLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp CGGGS----------------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhC----------------CHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 88776 2789999999999999999998754
No 54
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.71 E-value=4.9e-17 Score=131.73 Aligned_cols=109 Identities=25% Similarity=0.336 Sum_probs=92.7
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEE
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVV 129 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 129 (259)
..+.....++.+|||+|||+|..+..+ +..+++++|+|+.+++.++++. +++.+.++|+.++++++++||+|
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v 99 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFDVV 99 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEEEE
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEEEE
Confidence 445555567899999999999998877 4338999999999999999886 46889999999888878899999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
++..+++++ .+...+++++.++|+|||.+++.++...
T Consensus 100 ~~~~~l~~~---------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 100 LLFTTLEFV---------------EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEESCTTTC---------------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEcChhhhc---------------CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 999888776 3567899999999999999999887654
No 55
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.71 E-value=1.4e-16 Score=131.66 Aligned_cols=150 Identities=15% Similarity=0.106 Sum_probs=120.2
Q ss_pred hhcccCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeE
Q 025039 51 LVQPHIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDV 128 (259)
Q Consensus 51 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~ 128 (259)
.+...++++.+|||+|||+|.+++.+++.++. +|+++|+++.+++.|+++++.+++.+ +++.++|..+...+...||+
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~ 93 (244)
T 3gnl_A 14 KVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDT 93 (244)
T ss_dssp HHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCE
T ss_pred HHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccE
Confidence 34557788899999999999999999999876 89999999999999999999999865 99999999875533346999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCCCCcEEEEEEeCCeEEE
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHY 208 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
|+..++ +-....+++......|+++|.|++...........++...+|....+.....++..|
T Consensus 94 Iviagm-----------------Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Y 156 (244)
T 3gnl_A 94 IVIAGM-----------------GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVY 156 (244)
T ss_dssp EEEEEE-----------------CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHHTEEEEEEEEEEETTEEE
T ss_pred EEEeCC-----------------chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHCCCEEEEEEEEEECCEEE
Confidence 886554 225678899999999999999999876655555566677777666666666677777
Q ss_pred EEEEEEeCC
Q 025039 209 FFYILRKGK 217 (259)
Q Consensus 209 ~~~~~~~~~ 217 (259)
....+.++.
T Consensus 157 eii~~~~~~ 165 (244)
T 3gnl_A 157 EIMVLAPSE 165 (244)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEeCC
Confidence 777776653
No 56
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.70 E-value=2.3e-17 Score=135.97 Aligned_cols=136 Identities=19% Similarity=0.324 Sum_probs=106.9
Q ss_pred ccchhhhcCCCCcccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC
Q 025039 26 PHYWDERFSDEEHYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG 105 (259)
Q Consensus 26 ~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 105 (259)
.++|+..+.... ..|......+..++.....++.+|||+|||+|..+..+++.+. +++++|+|+.+++.+++++
T Consensus 9 a~~yd~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~---- 82 (239)
T 3bxo_A 9 ADVYDLFYLGRG-KDYAAEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL---- 82 (239)
T ss_dssp HHHHHHHHHHHT-CCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC----
T ss_pred HHHHHHHhhccH-hhHHHHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC----
Confidence 567887764321 1233333455566665567789999999999999999999987 9999999999999999875
Q ss_pred CCCeEEEEcccCCCcCCCCceeEEEec-ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 106 YKEVKVLEADMLDLPFSNDCFDVVIEK-ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 106 ~~~v~~~~~d~~~~~~~~~~fD~V~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+++.+.++|+.+++. .++||+|+|. .+++++ .+..+...+++++.++|+|||.+++.++..+
T Consensus 83 -~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 83 -PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYL------------KTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp -TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGC------------CSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred -CCCEEEECCHHHccc-CCCCcEEEEcCchHhhc------------CCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 368999999988776 5789999964 477766 2446788999999999999999999766543
No 57
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.70 E-value=4e-17 Score=140.04 Aligned_cols=119 Identities=16% Similarity=0.228 Sum_probs=100.0
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHH-hcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCce
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLY-NDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCF 126 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~-~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~f 126 (259)
..+...+.++.+|||+|||+|..+..++ ...+. +++++|+++.+++.+++++...+..+ ++++++|+.+++++ ++|
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~f 188 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGY 188 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCE
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCe
Confidence 4444556788999999999999999885 33333 99999999999999999998887755 99999999998876 899
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
|+|+++.+++++ .+......+++++.++|+|||++++.++..+
T Consensus 189 D~v~~~~~~~~~------------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 189 DLLTSNGLNIYE------------PDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp EEEECCSSGGGC------------CCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred EEEEECChhhhc------------CCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 999999988876 2445666799999999999999999876653
No 58
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.70 E-value=1.3e-16 Score=131.69 Aligned_cols=132 Identities=21% Similarity=0.361 Sum_probs=105.1
Q ss_pred ccchhhhcCCCCcccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC
Q 025039 26 PHYWDERFSDEEHYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG 105 (259)
Q Consensus 26 ~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 105 (259)
.++|+..+.... +..+...+...++++.+|||+|||+|..+..+++. . +++++|+|+.+++.+++++...+
T Consensus 8 a~~yd~~~~~~~-------~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~v~~vD~s~~~~~~a~~~~~~~~ 78 (243)
T 3d2l_A 8 AYVYDELMQDVP-------YPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-Y-EVTGVDLSEEMLEIAQEKAMETN 78 (243)
T ss_dssp THHHHHHTTTCC-------HHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-S-EEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhccc-------HHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-C-eEEEEECCHHHHHHHHHhhhhcC
Confidence 456666553221 23444555556677899999999999999999888 4 99999999999999999987666
Q ss_pred CCCeEEEEcccCCCcCCCCceeEEEecc-eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 106 YKEVKVLEADMLDLPFSNDCFDVVIEKA-TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 106 ~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.++.+.++|+.+++.+ ++||+|++.. +++++ .+..+...+++++.++|+|||.+++..+..
T Consensus 79 -~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 79 -RHVDFWVQDMRELELP-EPVDAITILCDSLNYL------------QTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp -CCCEEEECCGGGCCCS-SCEEEEEECTTGGGGC------------CSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred -CceEEEEcChhhcCCC-CCcCEEEEeCCchhhc------------CCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 4689999999887765 7899999975 77766 245778899999999999999999866543
No 59
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=7.3e-17 Score=134.26 Aligned_cols=136 Identities=19% Similarity=0.346 Sum_probs=102.1
Q ss_pred ccchhhhcCCCCcccccccchHHHHhhccc-CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc
Q 025039 26 PHYWDERFSDEEHYEWLKDYSHFRHLVQPH-IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK 104 (259)
Q Consensus 26 ~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 104 (259)
++||+..|..... .+......+..++... ..++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.+++++...
T Consensus 9 a~~yd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~ 86 (252)
T 1wzn_A 9 AEYYDTIYRRRIE-RVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKER 86 (252)
T ss_dssp GGGHHHHTHHHHH-THHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcchh-hhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhc
Confidence 6788887753210 0111122233444332 24678999999999999999999987 9999999999999999998776
Q ss_pred CCCCeEEEEcccCCCcCCCCceeEEEecc-eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 105 GYKEVKVLEADMLDLPFSNDCFDVVIEKA-TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 105 ~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+. ++.+.++|+.+++.+ ++||+|++.. .++++ +..+...+++++.++|+|||.+++...
T Consensus 87 ~~-~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~-------------~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 87 NL-KIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF-------------DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp TC-CCEEEESCGGGCCCC-SCEEEEEECSSGGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-ceEEEECChhhcccC-CCccEEEEcCCchhcC-------------CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 64 689999999887754 6899999863 33332 346788999999999999999987543
No 60
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.70 E-value=9.5e-17 Score=132.59 Aligned_cols=105 Identities=20% Similarity=0.327 Sum_probs=91.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|..+..+++.+..+++++|+++.+++.++++... .++.+.++|+.++++++++||+|++..+++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFDLAYSSLALH 118 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCceEEEEecccc
Confidence 36789999999999999999998765899999999999999988653 258999999988877778999999998887
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++ .+...+++++.++|+|||.+++.++.
T Consensus 119 ~~---------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 119 YV---------------EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp GC---------------SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cc---------------chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 76 35678999999999999999998754
No 61
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.69 E-value=6.1e-17 Score=138.40 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=95.8
Q ss_pred HHHHhhccc-CCCCCcEEEEcCCCCcchHHHHhc--CCCeEEEeeCCHHHHHHHHHHHhhc--CCCCeEEEEcccCCCcC
Q 025039 47 HFRHLVQPH-IKPNSSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLK--GYKEVKVLEADMLDLPF 121 (259)
Q Consensus 47 ~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~v~~~~~d~~~~~~ 121 (259)
.+...+... ..++.+|||+|||+|..+..+++. ...+|+|+|+|+.+++.|++++... ..++++++++|+.++++
T Consensus 24 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 103 (299)
T 3g5t_A 24 DFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKF 103 (299)
T ss_dssp HHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGG
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCc
Confidence 344444433 347899999999999999999964 2339999999999999999998775 23579999999998876
Q ss_pred CC------CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 122 SN------DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 122 ~~------~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.. ++||+|++..+++++ +...+++++.++|+|||.+++.++.
T Consensus 104 ~~~~~~~~~~fD~V~~~~~l~~~----------------~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 104 LGADSVDKQKIDMITAVECAHWF----------------DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp GCTTTTTSSCEEEEEEESCGGGS----------------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccccccCCCeeEEeHhhHHHHh----------------CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 66 799999999888754 5578999999999999999986544
No 62
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=1.4e-16 Score=136.38 Aligned_cols=116 Identities=11% Similarity=0.168 Sum_probs=96.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.+++++...+++ ++++.++|+.++ +++||+|++..
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~ 145 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG 145 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcc
Confidence 467889999999999999999998 64 9999999999999999999988876 599999999876 57899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+++++.. ++. ..+......+++++.++|||||++++.++..+
T Consensus 146 ~~~~~~d----~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 146 AFEHFAD----GAG--DAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CGGGTTC----CSS--CCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred hHHhcCc----ccc--ccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 8877610 000 00225678999999999999999999877543
No 63
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=1.1e-16 Score=135.35 Aligned_cols=103 Identities=24% Similarity=0.428 Sum_probs=90.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
..++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.+++++ +++.+.++|+.++++ +++||+|++..++
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-~~~fD~v~~~~~l 127 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV-DKPLDAVFSNAML 127 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC-SSCEEEEEEESCG
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc-CCCcCEEEEcchh
Confidence 35678999999999999999999665 9999999999999999875 468899999988876 5789999999998
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++ .+...+++++.++|+|||++++..+..
T Consensus 128 ~~~---------------~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 128 HWV---------------KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp GGC---------------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred hhC---------------cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 876 356789999999999999999987654
No 64
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.69 E-value=1.7e-16 Score=128.07 Aligned_cols=108 Identities=18% Similarity=0.228 Sum_probs=89.0
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC--CCeEEEEcccCCCc--CCCCc-eeEEEec
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY--KEVKVLEADMLDLP--FSNDC-FDVVIEK 132 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~--~~~~~-fD~V~~~ 132 (259)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++ ++++++++|+.+.. ..+++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 5789999999999999988888766899999999999999999998887 57999999987643 23568 9999998
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHH--HhcccCCcEEEEEecCCc
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGV--HRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~ 181 (259)
.+++ . .....+++.+ .++|+|||.+++......
T Consensus 133 ~~~~-~---------------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PPFH-F---------------NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSS-S---------------CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCC-C---------------ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 7753 1 3456777777 678999999998766543
No 65
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.69 E-value=4.7e-17 Score=139.57 Aligned_cols=113 Identities=13% Similarity=0.187 Sum_probs=87.2
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC------CeEEEEcccC------CC--cCCC
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK------EVKVLEADML------DL--PFSN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~------~v~~~~~d~~------~~--~~~~ 123 (259)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+.. ++++.+.|+. ++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 47899999999998777676665449999999999999999988765432 2567777772 22 2356
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
++||+|+|..++|+++.. .+...+++++.++|||||++++.+++...
T Consensus 128 ~~FD~V~~~~~lhy~~~~------------~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHP------------RHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp SCEEEEEEESCGGGTCST------------TTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCeeEEEECchHHHhCCH------------HHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 799999999888765311 23469999999999999999998876433
No 66
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=5.9e-17 Score=135.80 Aligned_cols=131 Identities=24% Similarity=0.375 Sum_probs=100.5
Q ss_pred ccchhhhcCCCCcccccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC
Q 025039 26 PHYWDERFSDEEHYEWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG 105 (259)
Q Consensus 26 ~~~w~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 105 (259)
.++|++.+.. ..|......+..++...++++.+|||+|||+|..+..+++.+. +++++|+|+.+++.++++..
T Consensus 25 a~~Yd~~~~~---~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~--- 97 (260)
T 2avn_A 25 ARAYDSMYET---PKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV--- 97 (260)
T ss_dssp HHHHGGGGCS---HHHHHHHHHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC---
T ss_pred HHHHHHhccc---cchhHHHHHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC---
Confidence 3455555521 2232223445566665566788999999999999999999877 89999999999999998864
Q ss_pred CCCeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 106 YKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 106 ~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
. .+.++|+.++++++++||+|++..++.++. .+...+++++.++|+|||.+++..++.
T Consensus 98 --~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 98 --K-NVVEAKAEDLPFPSGAFEAVLALGDVLSYV--------------ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp --S-CEEECCTTSCCSCTTCEEEEEECSSHHHHC--------------SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred --C-CEEECcHHHCCCCCCCEEEEEEcchhhhcc--------------ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 1 278889988887788999999987654431 237789999999999999999987654
No 67
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.69 E-value=2.1e-16 Score=133.92 Aligned_cols=121 Identities=13% Similarity=0.133 Sum_probs=99.9
Q ss_pred cccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCC
Q 025039 40 EWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLD 118 (259)
Q Consensus 40 ~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~ 118 (259)
.|++....-...+...+.++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|++++..+++.+ ++++++|+.+
T Consensus 107 ~f~~~~~~~~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~ 186 (278)
T 2frn_A 107 MFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD 186 (278)
T ss_dssp CCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred eEcCCcHHHHHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHH
Confidence 355554444555555677789999999999999999999987579999999999999999999888876 8999999998
Q ss_pred CcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 119 LPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 119 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+.. .++||+|+++.+.+ ...++..+.++|+|||.+++.+++.
T Consensus 187 ~~~-~~~fD~Vi~~~p~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 187 FPG-ENIADRILMGYVVR-------------------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CCC-CSCEEEEEECCCSS-------------------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred hcc-cCCccEEEECCchh-------------------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 765 67899999865432 1468889999999999999988764
No 68
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.69 E-value=7.1e-17 Score=137.79 Aligned_cols=112 Identities=15% Similarity=0.205 Sum_probs=88.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCC-----------------------------
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGY----------------------------- 106 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~----------------------------- 106 (259)
.++.+|||+|||+|..+..+++... .+|+|+|+++.+++.|++++...+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 4678999999999999999999843 3999999999999999998665431
Q ss_pred -----------------------------CCeEEEEcccCCCc-----CCCCceeEEEecceeeeeeeCCCCCCCCCchh
Q 025039 107 -----------------------------KEVKVLEADMLDLP-----FSNDCFDVVIEKATMEVLFVNSGDPWNPQPET 152 (259)
Q Consensus 107 -----------------------------~~v~~~~~d~~~~~-----~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~ 152 (259)
.++++.++|+.... +..++||+|+|..+++++..+ .+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~---------~~ 195 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLN---------WG 195 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHH---------HH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhc---------CC
Confidence 26899999987643 456799999999988665100 14
Q ss_pred HHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 153 VTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 153 ~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.....++++++.++|+|||+|++..
T Consensus 196 ~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 196 DEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEec
Confidence 4588899999999999999999863
No 69
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=4.2e-17 Score=134.74 Aligned_cols=112 Identities=15% Similarity=0.187 Sum_probs=90.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC--cCCCCceeEEEe-c
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIE-K 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~-~ 132 (259)
..++.+|||+|||+|..+..+++.+..+++++|+|+.|++.|+++....+ .++.++++|+.++ ++++++||+|++ .
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~d~ 136 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEECC
Confidence 45778999999999999999987766589999999999999999987766 4689999999887 777889999998 3
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
..+ .. .. .+......+++++.++|||||+++++++.
T Consensus 137 ~~~-~~-~~---------~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 137 YPL-SE-ET---------WHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCC-BG-GG---------TTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccc-ch-hh---------hhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 332 11 00 12356678899999999999999987643
No 70
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.68 E-value=1.9e-16 Score=123.96 Aligned_cols=101 Identities=20% Similarity=0.436 Sum_probs=88.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.++.+|||+|||+|..+..+++.+. +++++|+++.+++.++++ .+++.+..+| .++++++||+|++..++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~v~~~~~l 85 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDFILFANSF 85 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEEEEEESCS
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEEEEEccch
Confidence 45678999999999999999999987 999999999999999988 2478999988 55667899999999988
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++ .+...+++++.++|+|||.+++.++..
T Consensus 86 ~~~---------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 86 HDM---------------DDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp TTC---------------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred hcc---------------cCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 776 356789999999999999999987754
No 71
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.68 E-value=2e-16 Score=127.71 Aligned_cols=113 Identities=16% Similarity=0.254 Sum_probs=95.0
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCcee
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFD 127 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 127 (259)
+...+...+.++.+|||+|||+|..+..+++.+..+++++|+++.+++.|++++...+..++.+.++|+.+.. .++||
T Consensus 50 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD 127 (205)
T 3grz_A 50 AMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFD 127 (205)
T ss_dssp HHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEE
T ss_pred HHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCce
Confidence 4455555567889999999999999999998765599999999999999999999888767999999997743 47899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|+++.+++ ....+++++.++|+|||.+++.++..
T Consensus 128 ~i~~~~~~~------------------~~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 128 LIVANILAE------------------ILLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp EEEEESCHH------------------HHHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred EEEECCcHH------------------HHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 999876653 34788999999999999999976543
No 72
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.68 E-value=5.9e-17 Score=134.06 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=90.5
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC--cCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~ 132 (259)
.++++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.++++ +.+..+|+.+. ++++++||+|++.
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 456789999999999999999999877 899999999999998865 67788888764 5677899999999
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
.+++++ ..++...+++++.++|||||++++.++...
T Consensus 109 ~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 109 HFVEHL-------------DPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp SCGGGS-------------CGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred CchhhC-------------CcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 999887 334678999999999999999999877643
No 73
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.68 E-value=2.1e-16 Score=134.14 Aligned_cols=107 Identities=23% Similarity=0.302 Sum_probs=93.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++..+ .+++|+|+|+.+++.+++++...+. ++++.++|+.+++++ ++||+|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~v~~~~ 97 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELN-DKYDIAICHA 97 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCS-SCEEEEEEES
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcC-CCeeEEEECC
Confidence 45788999999999999999998843 2899999999999999999877664 799999999988764 6899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+++++ .+...+++++.++|+|||++++.++.
T Consensus 98 ~l~~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHM---------------TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGC---------------SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcC---------------CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88776 45579999999999999999998765
No 74
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.68 E-value=4.4e-17 Score=144.21 Aligned_cols=108 Identities=21% Similarity=0.313 Sum_probs=92.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcC-CC-eEEEeeCCHHHHHHHHHHHhhc-----C-C--CCeEEEEcccCCC------
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLK-----G-Y--KEVKVLEADMLDL------ 119 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~-~v~~vD~s~~~~~~a~~~~~~~-----~-~--~~v~~~~~d~~~~------ 119 (259)
+.++.+|||+|||+|..+..+++.. +. +|+|+|+|+.+++.+++++... | . +++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3467899999999999999998863 33 9999999999999999987644 2 2 4799999999886
Q ss_pred cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 120 PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 120 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++++++||+|+++.+++++ .+...+++++.++|||||++++.++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~---------------~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLS---------------TNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCGGGC---------------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcC---------------CCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 7778899999999998876 3567999999999999999999764
No 75
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.67 E-value=2.1e-16 Score=133.67 Aligned_cols=170 Identities=13% Similarity=0.156 Sum_probs=112.9
Q ss_pred ccchhhhcCC-CCcccccccchHHHHhhcccC-CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHh
Q 025039 26 PHYWDERFSD-EEHYEWLKDYSHFRHLVQPHI-KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLL 102 (259)
Q Consensus 26 ~~~w~~~~~~-~~~~~w~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~ 102 (259)
.+||...|.. +..+........+...+...+ .++.+|||+|||+|..+..++...+. +++++|+|+.+++.+++++.
T Consensus 75 ~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~ 154 (276)
T 2b3t_A 75 REFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ 154 (276)
T ss_dssp EEETTEEEECCTTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH
T ss_pred eEECCceEEeCCCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 5677776653 222222222333444333333 46789999999999999999976444 99999999999999999998
Q ss_pred hcCCCCeEEEEcccCCCcCCCCceeEEEecceeeeee----------eCCCCCCCCCchhHHHHHHHHHHHHhcccCCcE
Q 025039 103 LKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLF----------VNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGL 172 (259)
Q Consensus 103 ~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 172 (259)
..+++++.+.++|+.+. ++.++||+|+++.++...- ..+...+.....+......+++.+.++|+|||+
T Consensus 155 ~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~ 233 (276)
T 2b3t_A 155 HLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGF 233 (276)
T ss_dssp HHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred HcCCCceEEEEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCE
Confidence 88877899999999773 3357899999987653210 011111111222345678999999999999999
Q ss_pred EEEEecC-CccccccccCCCCCCcE
Q 025039 173 FISVSFG-QPHFRRPFFNAPQFTWS 196 (259)
Q Consensus 173 l~~~~~~-~~~~~~~~~~~~~~~~~ 196 (259)
+++.... +......++...+|...
T Consensus 234 l~~~~~~~~~~~~~~~l~~~Gf~~v 258 (276)
T 2b3t_A 234 LLLEHGWQQGEAVRQAFILAGYHDV 258 (276)
T ss_dssp EEEECCSSCHHHHHHHHHHTTCTTC
T ss_pred EEEEECchHHHHHHHHHHHCCCcEE
Confidence 9986432 22222334444555433
No 76
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.67 E-value=4.5e-16 Score=125.60 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=91.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++.++. +++++|+++.+++.+++++...++++++++++|+.+......+||+|++..+
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC
Confidence 457889999999999999999999854 9999999999999999999888887799999999764433467999998765
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++ +...+++++.++|+|||.+++....
T Consensus 118 ~~------------------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 118 GG------------------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TT------------------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred Cc------------------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 42 4468999999999999999998665
No 77
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=5.9e-17 Score=135.90 Aligned_cols=103 Identities=17% Similarity=0.319 Sum_probs=90.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.++++. ++.+.++|+.++++++++||+|++..+++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPDKSVDGVISILAIH 105 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCTTCBSEEEEESCGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCCCCEeEEEEcchHh
Confidence 5788999999999999999998766 9999999999998876653 78999999999888888999999999988
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
++ .+...+++++.++|| ||.+++.++....
T Consensus 106 ~~---------------~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 106 HF---------------SHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp GC---------------SSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred hc---------------cCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 76 567799999999999 9999998876543
No 78
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=4.6e-16 Score=124.74 Aligned_cols=123 Identities=16% Similarity=0.231 Sum_probs=95.8
Q ss_pred hhcccCCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCc-CCCCce
Q 025039 51 LVQPHIKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-FSNDCF 126 (259)
Q Consensus 51 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~-~~~~~f 126 (259)
++...++++.+|||+|||+|..+..+++. ++. +++++|+++.+++.|++++...++ ++++++++|+.+++ ..+++|
T Consensus 15 ~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 15 YIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp HHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCE
T ss_pred HHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCc
Confidence 33445678899999999999999999887 333 999999999999999999998877 56999999988765 455789
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+|+++.++ + .....+. .....+..++++++.++|+|||++++..+.
T Consensus 95 D~v~~~~~~--~--~~~~~~~--~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 95 KAVMFNLGY--L--PSGDHSI--STRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEESB--C--TTSCTTC--BCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eEEEEcCCc--c--cCccccc--ccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 999987655 1 0000000 013346677999999999999999998764
No 79
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.67 E-value=7.3e-16 Score=132.56 Aligned_cols=120 Identities=25% Similarity=0.347 Sum_probs=95.7
Q ss_pred hhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc-------CCCCeEEEEcccCCCc---
Q 025039 51 LVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-------GYKEVKVLEADMLDLP--- 120 (259)
Q Consensus 51 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~v~~~~~d~~~~~--- 120 (259)
.+...+.++.+|||+|||+|..+..+++.+..+++++|+|+.+++.++++.... +..++.++++|+.+++
T Consensus 27 ~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 106 (313)
T 3bgv_A 27 KVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID 106 (313)
T ss_dssp HHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT
T ss_pred HhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh
Confidence 333334577899999999999999998865449999999999999999987654 2336899999998865
Q ss_pred -CC--CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 121 -FS--NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 121 -~~--~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
++ .++||+|++..++|+++ ++..+...+++++.++|+|||.+++.+++..
T Consensus 107 ~~~~~~~~fD~V~~~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 107 KFRDPQMCFDICSCQFVCHYSF-----------ESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp TCSSTTCCEEEEEEETCGGGGG-----------GSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred hcccCCCCEEEEEEecchhhcc-----------CCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 43 35899999999887652 2446788999999999999999999887653
No 80
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.67 E-value=4.2e-16 Score=123.56 Aligned_cols=110 Identities=15% Similarity=0.218 Sum_probs=87.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCc----CCCCceeEEEe
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLP----FSNDCFDVVIE 131 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~----~~~~~fD~V~~ 131 (259)
.++.+|||+|||+|..+..+++.+..+|+++|+++.+++.|++++...++. +++++++|+.+.. ...++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 467899999999999999988876559999999999999999999888763 5999999987632 12578999999
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHH--HhcccCCcEEEEEecCCcc
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGV--HRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~~ 182 (259)
+.+++.. .....++.+ .++|+|||.+++.......
T Consensus 123 ~~~~~~~----------------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 123 DPPYAKQ----------------EIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp CCCGGGC----------------CHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CCCCCch----------------hHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 8775321 223445555 8899999999988766543
No 81
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.67 E-value=3.5e-16 Score=132.74 Aligned_cols=108 Identities=18% Similarity=0.278 Sum_probs=92.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++ .+. +|+|+|+|+.+++.+++++...+.. ++.+..+|+.+++ ++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~ 137 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIG 137 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeC
Confidence 45778999999999999999984 455 9999999999999999998877764 5899999997765 7899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++++ +..+...+++++.++|||||.+++.++..
T Consensus 138 ~l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 138 AFEHF-------------GHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CGGGT-------------CTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred chhhc-------------ChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 98876 22567899999999999999999987654
No 82
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=3.8e-16 Score=130.28 Aligned_cols=102 Identities=22% Similarity=0.248 Sum_probs=89.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
.++.+|||+|||+|..+..+++..+. +++++|+|+.+++.++++. +++.+..+|+.+++ ++++||+|+++.++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~-~~~~fD~v~~~~~l 105 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----PNTNFGKADLATWK-PAQKADLLYANAVF 105 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----TTSEEEECCTTTCC-CSSCEEEEEEESCG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----CCcEEEECChhhcC-ccCCcCEEEEeCch
Confidence 46789999999999999999988322 8999999999999999872 47899999998877 67899999999988
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+++ .+...+++++.++|+|||.+++.++.
T Consensus 106 ~~~---------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 106 QWV---------------PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GGS---------------TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hhC---------------CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 876 46778999999999999999998764
No 83
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.66 E-value=4.1e-16 Score=134.32 Aligned_cols=109 Identities=16% Similarity=0.227 Sum_probs=94.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.+++++...++.+ +.+..+|+.+++ ++||+|++..
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~ 163 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE 163 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeC
Confidence 357789999999999999999987 66 99999999999999999998877654 899999997764 6899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+++++ +..+...+++++.++|+|||.+++.++...
T Consensus 164 ~l~~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 164 AFEHF-------------GHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp CGGGT-------------CGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred hHHhc-------------CHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 88876 335778999999999999999999877653
No 84
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.66 E-value=4.6e-16 Score=125.66 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=87.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC-CcCCCCceeEEEecceee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LPFSNDCFDVVIEKATME 136 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~~~l~ 136 (259)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++++++++++|+.+ ++...++||+|+++.+++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 5789999999999999998888766999999999999999999998887779999999876 344456899999877643
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHh--cccCCcEEEEEecCC
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHR--VLKPDGLFISVSFGQ 180 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~ 180 (259)
. .....+++.+.+ +|+|||++++.....
T Consensus 134 ~----------------~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 134 R----------------GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp T----------------TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C----------------CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 1 234456666654 699999999876543
No 85
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.66 E-value=3.6e-16 Score=130.94 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=82.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC--CcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD--LPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.+++++... .+.....++.. ....+++||+|+++.
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~~~~~~~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR---CVTIDLLDITAEIPKELAGHFDFVLNDR 118 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTSCCCGGGTTCCSEEEEES
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc---cceeeeeecccccccccCCCccEEEEhh
Confidence 45788999999999999999999987 9999999999999999987643 12222222211 011246899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+++++ ...+...++.++.++| |||++++..
T Consensus 119 ~l~~~-------------~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 119 LINRF-------------TTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp CGGGS-------------CHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred hhHhC-------------CHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 98876 4467888999999999 999999864
No 86
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.66 E-value=5.7e-16 Score=131.26 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=86.5
Q ss_pred cCCCCCcEEEEcCCCCcchH-HHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGNSRLSE-GLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~-~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
.+.++.+|||+|||+|.++. .+++. +. +|+++|+++.+++.|+++++..++.+++++++|+.+++ +++||+|++.
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~ 195 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVA 195 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEEC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEEC
Confidence 46789999999999987664 44543 44 99999999999999999998888877999999998865 6789999975
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
... .+..++++++.++|||||++++...
T Consensus 196 a~~------------------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 196 ALA------------------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp TTC------------------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCc------------------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 431 3567899999999999999999764
No 87
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.65 E-value=9.3e-16 Score=134.29 Aligned_cols=151 Identities=17% Similarity=0.195 Sum_probs=109.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcC-CC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
..++.+|||+|||+|.+++.++..+ +. +++|+|+++.+++.|++++...+++++++.++|+.+++.+...||+|++++
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 4577899999999999999999976 33 999999999999999999999988789999999999876667799999998
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCCCCcEEEEEEeCCeEEEEEEEE
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHYFFYIL 213 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (259)
++..... ...+.......+++.+.++|+|||.+++.+...... ..+.. .++........+.++....++++
T Consensus 281 Pyg~r~~-------~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~-~~~~~-~g~~~~~~~~l~~g~l~~~i~vl 351 (354)
T 3tma_A 281 PHGLRLG-------RKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL-KRALP-PGFALRHARVVEQGGVYPRVFVL 351 (354)
T ss_dssp CSCC-----------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH-HHHCC-TTEEEEEEEECCBTTBCCEEEEE
T ss_pred CCcCccC-------CcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH-HHHhh-cCcEEEEEEEEEeCCEEEEEEEE
Confidence 8754311 111223345789999999999999999988765332 22223 33333333333333444445555
Q ss_pred Ee
Q 025039 214 RK 215 (259)
Q Consensus 214 ~~ 215 (259)
+|
T Consensus 352 ~r 353 (354)
T 3tma_A 352 EK 353 (354)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 88
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.65 E-value=2.2e-16 Score=130.70 Aligned_cols=112 Identities=15% Similarity=0.154 Sum_probs=89.3
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC--cCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~ 132 (259)
...++.+|||||||+|..+..+++..+.+++++|+++.+++.|+++....+ .++.++.+|+... .+++++||.|+..
T Consensus 57 ~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 57 ASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp HTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred hccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhcccccccCCceEEEe
Confidence 345789999999999999999998876699999999999999999988766 3688888887653 4667899999854
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.+..... ..+..+...+++++.++|||||+|++..
T Consensus 136 ~~~~~~~----------~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 136 TYPLSEE----------TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGG----------GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eeecccc----------hhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 3321110 0244788899999999999999998754
No 89
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.65 E-value=1.1e-15 Score=121.37 Aligned_cols=109 Identities=17% Similarity=0.348 Sum_probs=93.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC--eEEEEcccCCCcCCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...++++ +.+..+|+.+. .+.++||+|+++.+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADEVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VKDRKYNKIITNPP 128 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CTTSCEEEEEECCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cccCCceEEEECCC
Confidence 4678999999999999999998854 99999999999999999998888776 99999998773 34678999999877
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+++ .......+++++.++|+|||.+++..+...
T Consensus 129 ~~~--------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 129 IRA--------------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp STT--------------CHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred ccc--------------chhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 643 236778999999999999999999887653
No 90
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=1.5e-15 Score=122.86 Aligned_cols=102 Identities=18% Similarity=0.126 Sum_probs=88.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
..++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+++++++..+|+.+.....++||+|++..++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAP 153 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccch
Confidence 45788999999999999999999865 99999999999999999999888878999999998865556789999999888
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+++. +.+.++|+|||++++....
T Consensus 154 ~~~~---------------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIP---------------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCC---------------------THHHHTEEEEEEEEEEECS
T ss_pred hhhh---------------------HHHHHhcccCcEEEEEEcC
Confidence 7651 2578999999999997654
No 91
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.65 E-value=6.9e-16 Score=121.95 Aligned_cols=146 Identities=16% Similarity=0.230 Sum_probs=106.3
Q ss_pred hHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCC
Q 025039 46 SHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSN 123 (259)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 123 (259)
..+...+..++.++.+|||+|||+|.++..++...+. +++++|+|+.|++.+++++...|.. ++++ .|.... .+.
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~ 113 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYK 113 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTT
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCC
Confidence 3444444556678899999999999999999888655 9999999999999999999988876 3555 555443 345
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec---CCc--cccc---cccC--CCCC
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF---GQP--HFRR---PFFN--APQF 193 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~--~~~~---~~~~--~~~~ 193 (259)
++||+|++..++|++ ++.+..+.++.+.|+|||+++-..- +.+ .+.. ..+. ...-
T Consensus 114 ~~~DvVLa~k~LHlL---------------~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~ 178 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVL---------------KQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGW 178 (200)
T ss_dssp SEEEEEEEETCHHHH---------------HHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTT
T ss_pred CCcChhhHhhHHHhh---------------hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCc
Confidence 789999999988876 5666777799999999999997541 111 1100 0100 1334
Q ss_pred CcEEEEEEeCCeEEEE
Q 025039 194 TWSVEWITFGDGFHYF 209 (259)
Q Consensus 194 ~~~~~~~~~~~~~~~~ 209 (259)
.|......+++...|.
T Consensus 179 ~~~~~~~~~~nEl~y~ 194 (200)
T 3fzg_A 179 IKILDSKVIGNELVYI 194 (200)
T ss_dssp SCEEEEEEETTEEEEE
T ss_pred ceeeeeeeeCceEEEE
Confidence 5777888888876543
No 92
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.65 E-value=5e-16 Score=132.10 Aligned_cols=110 Identities=15% Similarity=0.232 Sum_probs=82.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC--------------C---------------
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY--------------K--------------- 107 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~--------------- 107 (259)
.++.+|||+|||+|.....++.....+|+|+|+|+.|++.|++++..... .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 36789999999999966555443333999999999999999986643110 0
Q ss_pred -CeEEEEcccCC-CcC-----CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 108 -EVKVLEADMLD-LPF-----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 108 -~v~~~~~d~~~-~~~-----~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.+.++.+|+.+ +++ ++++||+|+++.+++++. ....+...+++++.++|||||+|++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~-----------~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVS-----------PDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHC-----------SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhc-----------CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 14566778877 443 345699999999987741 124688999999999999999999974
No 93
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=1.6e-15 Score=119.43 Aligned_cols=111 Identities=14% Similarity=0.212 Sum_probs=89.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCC-CcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLD-LPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~-~~~~~~~fD~V~~~~ 133 (259)
..++.+|||+|||+|..+..+++.+..+++++|+++.+++.+++++...++. ++.++++|+.+ ++...+.||+|+++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 3467899999999999999999886559999999999999999999888775 58999999877 333346799999987
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHH--hcccCCcEEEEEecCCcc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVH--RVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~ 182 (259)
+++ ......+++.+. ++|+|||++++.......
T Consensus 109 ~~~----------------~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 109 PYA----------------KETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp SSH----------------HHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CCC----------------cchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 652 134456666666 999999999998765533
No 94
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.65 E-value=1.6e-15 Score=122.76 Aligned_cols=104 Identities=12% Similarity=0.110 Sum_probs=88.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.|+++++..+++ +++++++|+.+.......||+|++...
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 45788999999999999999999955 9999999999999999999988887 799999999873323357999997653
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+ +.. +++++.++|+|||++++.....
T Consensus 132 ~-------------------~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 132 G-------------------SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp C-------------------CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred c-------------------cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 3 223 8999999999999999987654
No 95
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.65 E-value=1.2e-15 Score=134.71 Aligned_cols=111 Identities=21% Similarity=0.275 Sum_probs=95.2
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++..+++ .++++++|+.+...++++||+|+++.++++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 678999999999999999999977 999999999999999999988876 489999999887655679999999988875
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
... ........+++++.++|+|||.++++....
T Consensus 311 ~~~----------~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 311 GGA----------VILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TCS----------SCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccc----------ccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 210 023678899999999999999999986544
No 96
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.65 E-value=1.1e-15 Score=124.23 Aligned_cols=114 Identities=19% Similarity=0.295 Sum_probs=91.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCCCceeEEEecc
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKA 133 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~ 133 (259)
.++.+|||+|||+|..+..+++..+. +++|+|+++.+++.|++++...+++++.++++|+.+++ +++++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 35789999999999999999998755 99999999999999999998888878999999998866 6677899999864
Q ss_pred eeeeeeeCCCCCCCCCchhH--HHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETV--TKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+. +|....+.. .....+++.+.++|+|||.+++.+..
T Consensus 120 ~~---------~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 120 SD---------PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CC---------CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CC---------CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 32 232111110 12367999999999999999987643
No 97
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.64 E-value=3.9e-15 Score=120.14 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=86.5
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
++.+|||+|||+|..+..++...+. +++++|+++.+++.+++++...+++++++.++|+.+.+ +.++||+|+++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 4789999999999999999987543 99999999999999999998888877999999998865 4578999997542
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.....+++.+.++|+|||.+++...
T Consensus 142 -----------------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 -----------------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp -----------------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred -----------------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2346899999999999999998753
No 98
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.63 E-value=3.5e-16 Score=127.95 Aligned_cols=113 Identities=17% Similarity=0.225 Sum_probs=89.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-c--CCCCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P--FSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~fD~V~~~~ 133 (259)
++.+|||+|||+|..+..+++..+. .|+|+|+++.+++.|++++...+++++.++++|+.++ + +++++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 5679999999999999999998775 8999999999999999999988888899999998773 3 5678999999753
Q ss_pred eeeeeeeCCCCCCCCCchhHH--HHHHHHHHHHhcccCCcEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETVT--KVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+ ++|....+... ....+++++.++|||||++++.+..
T Consensus 114 ~---------~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 P---------DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp C---------CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred C---------CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 2 22321111000 1135999999999999999998754
No 99
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.63 E-value=1.2e-15 Score=126.21 Aligned_cols=115 Identities=17% Similarity=0.272 Sum_probs=85.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhh------cCCCCeEEEEcccCC-Cc--CCCCc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLL------KGYKEVKVLEADMLD-LP--FSNDC 125 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~------~~~~~v~~~~~d~~~-~~--~~~~~ 125 (259)
..++.+|||||||+|..+..+++..+. .++|+|+|+.+++.|++++.. .+.+++.++++|+.+ ++ +++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 345678999999999999999998665 899999999999999987653 356689999999987 55 66789
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHH--HHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
||.|++..+ ++|....+.... ...+++++.++|+|||.|++.+..
T Consensus 124 ~D~v~~~~~---------dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 124 LTKMFFLFP---------DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEEESC---------C-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eeEEEEeCC---------CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 999986322 223211111110 147999999999999999997654
No 100
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.63 E-value=5.5e-16 Score=128.44 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=86.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCC---CCceeEEEec
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS---NDCFDVVIEK 132 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~V~~~ 132 (259)
.++.+|||+|||+|..+..++...+. +|+++|+|+.+++.+++++...++++++++++|+.+++.. .++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 46789999999999999999865443 8999999999999999999988887899999998776542 5789999986
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.+ .+...+++.+.++|+|||.+++..
T Consensus 149 ~~-------------------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 149 AV-------------------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp CC-------------------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cc-------------------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 52 235689999999999999999864
No 101
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.63 E-value=3.8e-16 Score=121.95 Aligned_cols=108 Identities=13% Similarity=0.203 Sum_probs=85.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-c-C--CCCceeEEEe
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P-F--SNDCFDVVIE 131 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~-~--~~~~fD~V~~ 131 (259)
++++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+. ++++.++|+.+. + . ..++||+|++
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 33678999999999999999999988 699999999999999999988876 789999998763 2 1 1247999999
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHH--hcccCCcEEEEEecCCcc
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVH--RVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~ 182 (259)
+.+++ . ...++++.+. ++|+|||.+++.......
T Consensus 117 ~~~~~-~----------------~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 117 APPYA-M----------------DLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCCTT-S----------------CTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CCCCc-h----------------hHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 87764 1 1123444444 999999999998766544
No 102
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=9.8e-16 Score=124.79 Aligned_cols=113 Identities=18% Similarity=0.231 Sum_probs=89.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCCCceeEEEecce
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKAT 134 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~ 134 (259)
++.+|||+|||+|..+..+++..+. +++|+|+|+.+++.|++++...+++++.++++|+.+++ +++++||.|++..+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5679999999999999999998654 99999999999999999998888888999999998764 56778999886432
Q ss_pred eeeeeeCCCCCCCCCchhHH--HHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVT--KVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.+|....+... ....+++++.++|+|||.+++.+..
T Consensus 118 ---------~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 118 ---------DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp ---------CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred ---------CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 23322111111 1367899999999999999998643
No 103
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=1.6e-15 Score=119.19 Aligned_cols=105 Identities=12% Similarity=0.228 Sum_probs=86.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCC-CcCCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLD-LPFSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~-~~~~~~~fD~V~~~ 132 (259)
..++.+|||+|||+|..+..+++..+. +++++|+++.+++.+++++...+++ ++ ++++|..+ ++...++||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 456789999999999999999988544 9999999999999999999888887 68 88888754 33222789999987
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.++++ ..+++++.++|+|||.+++.++..
T Consensus 102 ~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 102 GGLTA-------------------PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp C-TTC-------------------TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CcccH-------------------HHHHHHHHHhcCCCCEEEEEeecc
Confidence 76643 368999999999999999987654
No 104
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=1.9e-15 Score=126.62 Aligned_cols=123 Identities=11% Similarity=0.147 Sum_probs=92.4
Q ss_pred CC-CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCc--CCCCceeEEEe
Q 025039 56 IK-PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLP--FSNDCFDVVIE 131 (259)
Q Consensus 56 ~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--~~~~~fD~V~~ 131 (259)
+. ++.+|||+|||+|..+..+++.+..+|+|+|+++.+++.|++++..+++.+ ++++++|+.+.. ++.++||+|++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEE
Confidence 44 688999999999999999999876699999999999999999999888864 999999998865 44679999999
Q ss_pred cceeeeeee-CCCCC----CCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 132 KATMEVLFV-NSGDP----WNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 132 ~~~l~~~~~-~~~~~----~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+.++..... ....+ .............+++.+.++|+|||+++++..
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 887643200 00000 000001224567899999999999999999753
No 105
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.63 E-value=1.1e-15 Score=133.66 Aligned_cols=107 Identities=18% Similarity=0.277 Sum_probs=91.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|++++..+++++ ++++++|+.++++++++||+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 347889999999999999999999766999999995 9999999999888866 99999999998887889999999765
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
.+.+. .......++..+.++|||||+++.
T Consensus 143 ~~~l~------------~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCLF------------YESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTBT------------BTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccc------------CchhHHHHHHHHHHhCCCCCEEcc
Confidence 44431 224567899999999999999873
No 106
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.62 E-value=2e-15 Score=131.46 Aligned_cols=106 Identities=18% Similarity=0.246 Sum_probs=90.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|+++++.+++ ++++++.+|+.++++++++||+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 357889999999999999999998755999999997 99999999988887 4699999999988877789999998764
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEE
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 174 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 174 (259)
...+ ........++.++.++|||||.++
T Consensus 141 ~~~l------------~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFL------------LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTB------------TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhc------------cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3222 123567789999999999999998
No 107
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.62 E-value=1.2e-16 Score=129.21 Aligned_cols=121 Identities=13% Similarity=0.066 Sum_probs=71.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-----CceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-----DCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~fD~V~ 130 (259)
.++.+|||+|||+|..+..+++.++. +++++|+++.+++.+++++...+. +++++++|+.+ +++. ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~-~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIE-WLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-HHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHh-hhhhhhhccCcccEEE
Confidence 57789999999999999999999765 999999999999999999887776 78888888877 4444 7899999
Q ss_pred ecceeeeeeeCC-----------CCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 131 EKATMEVLFVNS-----------GDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++.++....... ...+............+++++.++|+|||++++....
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 987764321000 0000000111223378899999999999995555443
No 108
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.61 E-value=9.3e-16 Score=125.16 Aligned_cols=102 Identities=23% Similarity=0.313 Sum_probs=86.4
Q ss_pred hhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEE
Q 025039 51 LVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 51 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 130 (259)
.+....+ +.+|||+|||+|..+..+++. +++|+++.+++.++++ ++.+.++|+.++++++++||+|+
T Consensus 41 ~l~~~~~-~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~v~ 107 (219)
T 1vlm_A 41 AVKCLLP-EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKDESFDFAL 107 (219)
T ss_dssp HHHHHCC-SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCTTCEEEEE
T ss_pred HHHHhCC-CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCCCCeeEEE
Confidence 4444443 889999999999999988655 9999999999999886 47888999988887778999999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+..+++++ .+...+++++.++|+|||.+++.++..
T Consensus 108 ~~~~l~~~---------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 108 MVTTICFV---------------DDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp EESCGGGS---------------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EcchHhhc---------------cCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 99988766 355789999999999999999987654
No 109
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.61 E-value=4.7e-15 Score=130.27 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=94.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCC--cCCCCceeEEEec
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL--PFSNDCFDVVIEK 132 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~--~~~~~~fD~V~~~ 132 (259)
.++.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...++. ++++..+|+.+. +++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 35689999999999999999998766 9999999 99999999998877764 599999999885 355 689999999
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.++|++ +.++...+|+++.++|+|||++++.+...
T Consensus 256 ~vlh~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 256 QFLDCF-------------SEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp SCSTTS-------------CHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred chhhhC-------------CHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 999876 45677899999999999999999987543
No 110
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.61 E-value=1.5e-15 Score=126.67 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=87.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCC---CCceeEEEec
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS---NDCFDVVIEK 132 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~V~~~ 132 (259)
.++.+|||+|||+|..++.++...+. +|+++|+++.+++.+++++...++.+++++++|+.+++.. .++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 46789999999999999999987554 9999999999999999999999988899999999876532 4789999986
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+. +...+++.+.++|+|||++++...
T Consensus 159 a~~-------------------~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 159 AVA-------------------PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp SSC-------------------CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CcC-------------------CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 532 345789999999999999998653
No 111
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.61 E-value=8.5e-16 Score=135.61 Aligned_cols=106 Identities=18% Similarity=0.271 Sum_probs=90.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.|..+|+|+|+| .+++.|++++..+++.+ ++++++|+.+++++ ++||+|++..+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcCh
Confidence 45788999999999999999999987799999999 99999999999888765 99999999988766 78999999765
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
.+.+ ........++..+.++|+|||++++
T Consensus 139 ~~~l------------~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 139 GYFL------------LRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp BTTB------------TTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred hhcc------------cchHHHHHHHHHHHhhCCCCeEEEE
Confidence 4444 1224567899999999999999986
No 112
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.61 E-value=8.8e-15 Score=120.09 Aligned_cols=101 Identities=18% Similarity=0.102 Sum_probs=85.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+ ++.+..+|+.+.....++||+|++..++
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVD-KVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEEEKPYDRVVVWATA 144 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcC-EEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccccCCCccEEEECCcH
Confidence 45778999999999999999999885 99999999999999999987665 7899999987732245789999999888
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++ .+++.++|+|||++++.....
T Consensus 145 ~~~---------------------~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 145 PTL---------------------LCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SSC---------------------CHHHHHTEEEEEEEEEEECSS
T ss_pred HHH---------------------HHHHHHHcCCCcEEEEEEcCC
Confidence 765 136889999999999986543
No 113
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.60 E-value=6.6e-15 Score=119.68 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=79.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC----cCCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----PFSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~V~ 130 (259)
+.++.+|||+|||+|..+..+++.... +|+|+|+|+.|++.+.+.++.. .++.++.+|+... ++. ++||+|+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~ 131 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIY 131 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEE
Confidence 467889999999999999999887533 8999999999887777665543 3688888888763 333 7899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
++.. .......+++++.++|||||.+++..
T Consensus 132 ~~~~-----------------~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 132 QDIA-----------------QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECCC-----------------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eecc-----------------ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8621 11344567999999999999999974
No 114
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.60 E-value=1.1e-15 Score=130.35 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=82.6
Q ss_pred CCCCcEEEEcCCCCcchHH----HHhcCCC-eE--EEeeCCHHHHHHHHHHHhhc-CCCCeEE--EEcccCCCc------
Q 025039 57 KPNSSVLELGCGNSRLSEG----LYNDGIT-AI--TCIDLSAVAVEKMQERLLLK-GYKEVKV--LEADMLDLP------ 120 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~----l~~~~~~-~v--~~vD~s~~~~~~a~~~~~~~-~~~~v~~--~~~d~~~~~------ 120 (259)
.++.+|||+|||+|..+.. ++..++. .+ +++|+|+.|++.+++++... +.+++.+ ..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3567999999999976543 3333332 44 99999999999999987653 4445554 344544332
Q ss_pred CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 121 FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 121 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++++||+|++..+++++ .++..+|++++++|||||++++...+.
T Consensus 131 ~~~~~fD~V~~~~~l~~~---------------~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYV---------------KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGC---------------SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeec---------------CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 356889999999999887 567889999999999999999986543
No 115
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.60 E-value=2.1e-15 Score=126.94 Aligned_cols=111 Identities=20% Similarity=0.257 Sum_probs=90.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHH------HHHHHHHHHhhcCC-CCeEEEEcc---cCCCcCCC
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAV------AVEKMQERLLLKGY-KEVKVLEAD---MLDLPFSN 123 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~------~~~~a~~~~~~~~~-~~v~~~~~d---~~~~~~~~ 123 (259)
+.++.+|||+|||+|..+..+++. |+. +++|+|+|+. +++.+++++...++ +++++..+| ...+++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCC
Confidence 467889999999999999999988 453 9999999997 99999999887776 359999998 33455667
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
++||+|++..+++++ .+...+++.+.++++|||.+++.++..+
T Consensus 121 ~~fD~v~~~~~l~~~---------------~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYF---------------ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp CCCSEEEEESCGGGS---------------SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred CCEEEEEEccchhhC---------------CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 899999999999876 2234577777788888999999877653
No 116
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.59 E-value=7.8e-15 Score=116.27 Aligned_cols=105 Identities=19% Similarity=0.310 Sum_probs=88.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCC-CceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSN-DCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++.+ .+++++|+++.+++.+++++...+. +++.+.++|+.+ .++. ++||+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECC
Confidence 4578899999999999999999988 4999999999999999999988877 568999998866 2222 5899999876
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++ ....+++.+.++|+|||.+++..+..
T Consensus 109 ~~~------------------~~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 109 SGG------------------ELQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp CTT------------------CHHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred chH------------------HHHHHHHHHHHhcCCCcEEEEEecCc
Confidence 653 23689999999999999999987653
No 117
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.59 E-value=3.2e-15 Score=124.98 Aligned_cols=112 Identities=17% Similarity=0.253 Sum_probs=92.5
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCcee
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFD 127 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 127 (259)
....+...+.++.+|||+|||+|.++..+++.|. +++++|+++.+++.+++++..+++. +++.++|+.+. ++.++||
T Consensus 110 ~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~-~~~~~fD 186 (254)
T 2nxc_A 110 ALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA-LPFGPFD 186 (254)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH-GGGCCEE
T ss_pred HHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc-CcCCCCC
Confidence 3344444567789999999999999999999988 9999999999999999999888875 88889888662 3456899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|+++... .....++..+.++|+|||++++..+..
T Consensus 187 ~Vv~n~~~------------------~~~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 187 LLVANLYA------------------ELHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp EEEEECCH------------------HHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred EEEECCcH------------------HHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 99986543 345789999999999999999976543
No 118
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.59 E-value=3e-15 Score=126.27 Aligned_cols=105 Identities=19% Similarity=0.327 Sum_probs=83.8
Q ss_pred CCCcEEEEcCCCCc----chHHHHhc-CC---C-eEEEeeCCHHHHHHHHHHHhh-----------------------cC
Q 025039 58 PNSSVLELGCGNSR----LSEGLYND-GI---T-AITCIDLSAVAVEKMQERLLL-----------------------KG 105 (259)
Q Consensus 58 ~~~~vLDiGcG~G~----~~~~l~~~-~~---~-~v~~vD~s~~~~~~a~~~~~~-----------------------~~ 105 (259)
++.+|||+|||+|. +++.+++. +. . +|+|+|+|+.|++.|+++.-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 56666665 31 2 899999999999999987410 00
Q ss_pred -C-------CCeEEEEcccCCCcCC-CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 106 -Y-------KEVKVLEADMLDLPFS-NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 106 -~-------~~v~~~~~d~~~~~~~-~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
+ ..+.|.++|+.+.+++ .+.||+|+|.+++.++ ..+...++++++.++|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-------------~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-------------DKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-------------CHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-------------CHHHHHHHHHHHHHHhCCCcEEEE
Confidence 0 2588999999885554 4689999999998877 456778999999999999999987
No 119
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=1.1e-14 Score=118.17 Aligned_cols=104 Identities=22% Similarity=0.140 Sum_probs=86.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcC-C-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDG-I-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++.+ + .+++++|+++.+++.+++++...+++++.+..+|+.......++||+|++..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC
Confidence 4578899999999999999999886 3 3999999999999999999988887789999999855322356899999998
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++++ .+++.++|+|||.+++.....
T Consensus 155 ~~~~~---------------------~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 155 AGPKI---------------------PEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BBSSC---------------------CHHHHHTEEEEEEEEEEESSS
T ss_pred chHHH---------------------HHHHHHHcCCCcEEEEEECCC
Confidence 88765 147899999999999976543
No 120
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.59 E-value=1.2e-14 Score=119.33 Aligned_cols=118 Identities=10% Similarity=0.129 Sum_probs=91.7
Q ss_pred ccccchHHHHhhc-----ccCCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE
Q 025039 41 WLKDYSHFRHLVQ-----PHIKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLE 113 (259)
Q Consensus 41 w~~~~~~~~~~l~-----~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~ 113 (259)
|-...+.+...+. ..++||.+|||+|||+|..+..+++. |+. +|+++|+++.|++.+++++... +++..+.
T Consensus 55 w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~ 132 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPIL 132 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEE
T ss_pred ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEE
Confidence 5555555554433 23579999999999999999999987 665 9999999999999999987755 4788888
Q ss_pred cccCCC---cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 114 ADMLDL---PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 114 ~d~~~~---~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+|.... +...+++|+|++.... ..+...++.++.+.|||||.++++.
T Consensus 133 ~d~~~p~~~~~~~~~vDvVf~d~~~-----------------~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 133 GDARFPEKYRHLVEGVDGLYADVAQ-----------------PEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp SCTTCGGGGTTTCCCEEEEEECCCC-----------------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeccCccccccccceEEEEEEeccC-----------------ChhHHHHHHHHHHhccCCCEEEEEE
Confidence 887653 3455789998864221 1456789999999999999999864
No 121
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.59 E-value=6.3e-15 Score=128.49 Aligned_cols=110 Identities=24% Similarity=0.349 Sum_probs=92.2
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
++.+|||+|||+|.++..+++.++. +++++|+|+.+++.+++++...+. .+.+..+|+.+.. .++||+|+++.+++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEccccccc--cCCeeEEEECCCcc
Confidence 5679999999999999999999875 999999999999999999988775 4677888887643 56899999999887
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+... .+......+++++.++|+|||.++++....
T Consensus 273 ~g~~----------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 273 DGMQ----------TSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSSH----------HHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred cCcc----------CCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 4210 134567899999999999999999987654
No 122
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.59 E-value=4.1e-15 Score=121.40 Aligned_cols=101 Identities=26% Similarity=0.438 Sum_probs=86.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC--CcCCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD--LPFSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|..+..+++.+. +++++|+++.+++.++++. ..+..+|+.+ .++++++||+|++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGT-RVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTC-EEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 4778999999999999999999864 9999999999999998753 3678888876 4566789999999988
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++++ .+...+++++.++|+|||.+++..+..
T Consensus 103 l~~~---------------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 103 LEHL---------------FDPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp GGGS---------------SCHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred hhhc---------------CCHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 8776 345689999999999999999987654
No 123
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=5.9e-15 Score=130.06 Aligned_cols=113 Identities=18% Similarity=0.223 Sum_probs=90.7
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC---CeEEEEcccCCCcCCCCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK---EVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
++.+|||+|||+|.++..+++.++. +|+++|+|+.+++.+++++..+++. ++++..+|+.+ .++.++||+|+++.
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNP 300 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECC
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECC
Confidence 4589999999999999999999754 9999999999999999999888764 47889999987 44567899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+++..... ......++++++.++|+|||.++++.....
T Consensus 301 pfh~~~~~----------~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 301 PFHQQHAL----------TDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp CC-----------------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CcccCccc----------CHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 88643100 112345789999999999999999876543
No 124
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.58 E-value=8.6e-15 Score=126.80 Aligned_cols=110 Identities=15% Similarity=0.257 Sum_probs=95.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|..+..+++..+. +++++|++ .+++.+++++...++.+ +++..+|+.+.+++. .||+|++..+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~v~~~~~ 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGN-DYDLVLLPNF 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCS-CEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCC-CCcEEEEcch
Confidence 56789999999999999999998554 99999999 99999999988777654 999999998866554 4999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
++++ +.++...+++++.++|+|||++++.++..+
T Consensus 242 l~~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 242 LHHF-------------DVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred hccC-------------CHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 8876 456778999999999999999999876543
No 125
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.58 E-value=7.2e-17 Score=133.56 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=85.7
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|++++...++ +++.++++|+.+++ +.++||+|+++.+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM-RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 688999999999999999999985 999999999999999999998887 46999999998866 457899999998887
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
+. ......+.++.++|+|||.+++.
T Consensus 156 ~~---------------~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GP---------------DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SG---------------GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Cc---------------chhhhHHHHHHhhcCCcceeHHH
Confidence 54 22223566778888888886653
No 126
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.58 E-value=1.1e-14 Score=126.15 Aligned_cols=107 Identities=17% Similarity=0.225 Sum_probs=92.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+..+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...++ +++++..+|+.+ +.+. +||+|++..++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCC-SCSEEEEESCG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCC-CCcEEEEehhh
Confidence 4679999999999999999998766 8999999 9999999999887776 359999999973 4444 79999999999
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
|++ +.+...+++++++++|+|||++++.+...
T Consensus 246 h~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 246 HDW-------------DDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp GGS-------------CHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred ccC-------------CHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 887 44567899999999999999999987654
No 127
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.58 E-value=8.8e-15 Score=126.12 Aligned_cols=125 Identities=20% Similarity=0.224 Sum_probs=92.3
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
..++.+|||+|||+|..+..+++... .+|+++|+++.+++.+++++...+++++.++++|+.+++...++||+|++..
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 46788999999999999999998642 3899999999999999999999888789999999988654456899999854
Q ss_pred ee---eeeeeCCCCCCCCCchh----HHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 134 TM---EVLFVNSGDPWNPQPET----VTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l---~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+. ..+...+...|.-.++. .....++++++.++|||||++++.+++.
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 31 11111111112111111 1223689999999999999999988754
No 128
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.58 E-value=2.2e-15 Score=122.72 Aligned_cols=102 Identities=20% Similarity=0.333 Sum_probs=84.7
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC---cCC-CCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL---PFS-NDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~~-~~~fD~V~~~~ 133 (259)
++.+|||+|||+|..+..+++.+. +++|+|+++.+++.++++ .++.+...|+.++ +.. ..+||+|++..
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEECc
Confidence 568999999999999999999977 999999999999999987 2567777777665 333 34599999988
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
+++ . .+...+++++.++|+|||++++.++....
T Consensus 125 ~l~-~---------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 125 ALL-H---------------QDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CCC-S---------------SCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred hhh-h---------------hhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 886 3 34568999999999999999998876543
No 129
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.58 E-value=9.5e-15 Score=137.37 Aligned_cols=108 Identities=18% Similarity=0.299 Sum_probs=92.9
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhh------cCCCCeEEEEcccCCCcCCCCceeEE
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLL------KGYKEVKVLEADMLDLPFSNDCFDVV 129 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~v~~~~~d~~~~~~~~~~fD~V 129 (259)
++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++.. .+.+++++.++|+.++++.+++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 678999999999999999999983 3999999999999999986653 25567999999999988888899999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++..+++|+ .......+++++.++|||| .+++.++.
T Consensus 801 V~~eVLeHL-------------~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 801 TCLEVIEHM-------------EEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCGGGS-------------CHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEeCchhhC-------------ChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 999999987 3455668999999999999 77776543
No 130
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.57 E-value=6.3e-15 Score=127.75 Aligned_cols=105 Identities=22% Similarity=0.338 Sum_probs=88.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
.++.+|||+|||+|.++..+++.|..+|+|+|++ .+++.|++++..+++.+ ++++.+|+.+++++.++||+|++..+.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 4678999999999999999999876699999999 59999999998888754 999999999887777899999997654
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEE
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 174 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 174 (259)
+.+. ....+..++..+.++|+|||.++
T Consensus 116 ~~l~------------~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLL------------YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBS------------TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcc------------cHHHHHHHHHHHHhhcCCCeEEE
Confidence 4431 22356688999999999999997
No 131
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.57 E-value=9.8e-15 Score=128.31 Aligned_cols=110 Identities=12% Similarity=0.080 Sum_probs=87.9
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHH-------hhcCC--CCeEEEEcccCCCcCCC-
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERL-------LLKGY--KEVKVLEADMLDLPFSN- 123 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~-------~~~~~--~~v~~~~~d~~~~~~~~- 123 (259)
.+.++.+|||+|||+|.+++.++.. +..+++|+|+++.+++.|+++. ...++ .+++++++|+.++++.+
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 3568899999999999999999865 4336999999999999998754 33344 46999999999877543
Q ss_pred -CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 124 -DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 124 -~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
..||+|+++.++. . .+....|.++.+.|||||+|++.+...
T Consensus 250 ~~~aDVVf~Nn~~F-~---------------pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 250 IANTSVIFVNNFAF-G---------------PEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHTCSEEEECCTTC-C---------------HHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred cCCccEEEEccccc-C---------------chHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 4799999876642 1 577788899999999999999876543
No 132
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.57 E-value=1.9e-14 Score=126.15 Aligned_cols=110 Identities=13% Similarity=0.198 Sum_probs=94.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
..++.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...++++ +++..+|+.+.+++. +|+|++..
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~ 264 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCR 264 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--CSEEEEES
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--CCEEEEec
Confidence 356789999999999999999998765 9999999 999999999998877765 999999998876553 49999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+++++ ..+....+++++.++|+|||++++.++..+
T Consensus 265 vlh~~-------------~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 265 ILYSA-------------NEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp CGGGS-------------CHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred hhccC-------------CHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 99876 345688999999999999999999876543
No 133
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=1.5e-14 Score=122.09 Aligned_cols=107 Identities=20% Similarity=0.150 Sum_probs=91.0
Q ss_pred ccCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 54 PHIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
..+.++.+|||+|||+|.++..+++.+.. +|+++|+++.+++.|+++++.++++++.++++|+.+.+. .++||+|+++
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d 193 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMG 193 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEEC
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEEC
Confidence 34677899999999999999999998544 999999999999999999999998889999999988733 5689999987
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.+. ...+++..+.+.|+|||++++.++..
T Consensus 194 ~p~-------------------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 194 YVH-------------------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCS-------------------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred Ccc-------------------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 653 22468899999999999999877644
No 134
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.57 E-value=1.7e-14 Score=126.95 Aligned_cols=107 Identities=23% Similarity=0.337 Sum_probs=92.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...++. ++++..+|+.+ +++. .||+|++..
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 356789999999999999999998765 9999999 99999999998887775 59999999976 3333 499999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++++ .......+++++.++|+|||++++.++
T Consensus 257 vl~~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 VLLNW-------------SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CGGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCC-------------CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99876 345567899999999999999999877
No 135
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.57 E-value=1.1e-14 Score=121.34 Aligned_cols=117 Identities=16% Similarity=0.198 Sum_probs=88.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhc--CCC-eEEEeeCCHHHHHHHHHHHhhc---CCCC-----------------------
Q 025039 58 PNSSVLELGCGNSRLSEGLYND--GIT-AITCIDLSAVAVEKMQERLLLK---GYKE----------------------- 108 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~--~~~-~v~~vD~s~~~~~~a~~~~~~~---~~~~----------------------- 108 (259)
++.+|||+|||+|.++..+++. ... +|+|+|+|+.+++.|++++... ++.+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999887 333 8999999999999999887654 3321
Q ss_pred ---eE-------------EEEcccCCCcC-----CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcc
Q 025039 109 ---VK-------------VLEADMLDLPF-----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVL 167 (259)
Q Consensus 109 ---v~-------------~~~~d~~~~~~-----~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 167 (259)
++ +.++|+.+... ...+||+|+++.++..... |.. .........+++++.++|
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~-----~~~-~~~~~~~~~~l~~~~~~L 204 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTH-----WEG-QVPGQPVAGLLRSLASAL 204 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSS-----SSS-CCCHHHHHHHHHHHHHHS
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccc-----ccc-cccccHHHHHHHHHHHhc
Confidence 55 88999877431 3348999999887654310 100 013467789999999999
Q ss_pred cCCcEEEEEecCC
Q 025039 168 KPDGLFISVSFGQ 180 (259)
Q Consensus 168 kpgG~l~~~~~~~ 180 (259)
+|||+++++....
T Consensus 205 kpgG~l~~~~~~~ 217 (250)
T 1o9g_A 205 PAHAVIAVTDRSR 217 (250)
T ss_dssp CTTCEEEEEESSS
T ss_pred CCCcEEEEeCcch
Confidence 9999999965544
No 136
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=1.3e-14 Score=121.75 Aligned_cols=123 Identities=16% Similarity=0.137 Sum_probs=90.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhh---cCCCC-eEEEEcccCCC-------cCCC
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLL---KGYKE-VKVLEADMLDL-------PFSN 123 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~---~~~~~-v~~~~~d~~~~-------~~~~ 123 (259)
..++.+|||+|||+|..+..+++.++. +++++|+++.+++.|++++.. +++.+ +.++++|+.+. .++.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 346789999999999999999998765 999999999999999999988 77753 99999999886 2456
Q ss_pred CceeEEEecceeeeeeeCC-CCC--CCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNS-GDP--WNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~-~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++||+|+++.++...-... ... .............+++.+.++|+|||.++++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 7899999997764320000 000 000000112357889999999999999998654
No 137
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.57 E-value=1.5e-14 Score=118.39 Aligned_cols=109 Identities=16% Similarity=0.153 Sum_probs=88.8
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhcCC-----C-eEEEeeCCHHHHHHHHHHHhhcC-----CCCeEEEEcccCC
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYNDGI-----T-AITCIDLSAVAVEKMQERLLLKG-----YKEVKVLEADMLD 118 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-----~-~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~ 118 (259)
..+...+.++.+|||+|||+|..+..+++.+. . +|+++|+++.+++.+++++...+ .+++.+..+|+.+
T Consensus 72 ~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 72 KRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ 151 (227)
T ss_dssp HHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG
T ss_pred HHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh
Confidence 33333467789999999999999999998753 3 89999999999999999988776 4679999999887
Q ss_pred Cc----CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 119 LP----FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 119 ~~----~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.. ...++||+|++..+++++ ++.+.++|+|||++++....
T Consensus 152 ~~~~~~~~~~~fD~I~~~~~~~~~---------------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 152 VNEEEKKELGLFDAIHVGASASEL---------------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCHHHHHHHCCEEEEEECSBBSSC---------------------CHHHHHHEEEEEEEEEEEEE
T ss_pred cccccCccCCCcCEEEECCchHHH---------------------HHHHHHhcCCCcEEEEEEcc
Confidence 54 445789999998776543 47788999999999987543
No 138
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.57 E-value=2.7e-14 Score=125.71 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=93.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...++. ++++..+|+.+ +.+. .||+|++..+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPD-GADVYLIKHV 277 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCS-SCSEEEEESC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCC-CceEEEhhhh
Confidence 46789999999999999999998766 9999999 99999999998877753 59999999983 4454 7999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++++ +.....++++++.++|+|||++++.+...
T Consensus 278 lh~~-------------~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 278 LHDW-------------DDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp GGGS-------------CHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred hccC-------------CHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9877 44566789999999999999999987643
No 139
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.57 E-value=1.6e-14 Score=120.00 Aligned_cols=113 Identities=19% Similarity=0.344 Sum_probs=86.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhc--------CCCCeEEEEcccCC-Cc--CCC
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLK--------GYKEVKVLEADMLD-LP--FSN 123 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--------~~~~v~~~~~d~~~-~~--~~~ 123 (259)
+.++.+|||+|||+|.++..+++.++. +++|+|+|+.+++.+++++... +++++.++++|+.+ ++ ++.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 446789999999999999999999875 8999999999999999988766 67789999999987 44 556
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHH--HHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVT--KVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+++|.|+... .++|........ ....++.++.++|+|||.+++.+
T Consensus 127 ~~~d~v~~~~---------p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCF---------PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEES---------CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEEC---------CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 7899887431 122321100000 01479999999999999999965
No 140
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.57 E-value=2e-14 Score=117.61 Aligned_cols=109 Identities=18% Similarity=0.177 Sum_probs=88.0
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcC-----CCCeEEEEcccCCCcCC
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKG-----YKEVKVLEADMLDLPFS 122 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~ 122 (259)
..+...+.++.+|||+|||+|..+..+++. ++. +|+++|+++.+++.+++++...+ .+++.+..+|+......
T Consensus 69 ~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 148 (226)
T 1i1n_A 69 ELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE 148 (226)
T ss_dssp HHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG
T ss_pred HHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc
Confidence 333334667899999999999999999887 443 99999999999999999987754 34789999998765544
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.++||+|++..+++++ ++++.++|+|||++++....
T Consensus 149 ~~~fD~i~~~~~~~~~---------------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPVV---------------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GCCEEEEEECSBBSSC---------------------CHHHHHTEEEEEEEEEEESC
T ss_pred CCCcCEEEECCchHHH---------------------HHHHHHhcCCCcEEEEEEec
Confidence 6789999988776543 46788999999999997654
No 141
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=8.5e-15 Score=120.69 Aligned_cols=103 Identities=17% Similarity=0.290 Sum_probs=86.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCC-c-CCCCceeEEEec
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-FSNDCFDVVIEK 132 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~-~~~~~fD~V~~~ 132 (259)
.++.+|||+|||+|..+..+++..+. +|+++|+++.+++.|++++...++. +++++++|+.+. + ...++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 36789999999999999999996544 9999999999999999999988875 699999999774 2 225789999975
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
... .....+++.+.++|+|||++++..
T Consensus 150 ~~~------------------~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 150 AAK------------------AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TTS------------------SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CcH------------------HHHHHHHHHHHHhcCCCeEEEEee
Confidence 432 345679999999999999998843
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.56 E-value=9.1e-15 Score=121.85 Aligned_cols=104 Identities=21% Similarity=0.326 Sum_probs=88.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
+.++.+|||+|||+|.++..+++. ++. +++++|+++.+++.|+++++..++++ +++.++|+.+. ++.++||+|+++
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~ 169 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILD 169 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEEC
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEEC
Confidence 457889999999999999999998 544 99999999999999999999888877 99999999864 556789999974
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.. +...+++++.++|+|||.+++.....
T Consensus 170 ~~--------------------~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 170 LP--------------------QPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp SS--------------------CGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CC--------------------CHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 22 22468999999999999999987543
No 143
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.56 E-value=1.1e-14 Score=119.46 Aligned_cols=99 Identities=17% Similarity=0.288 Sum_probs=82.9
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc-CCCcCC-CCcee
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LDLPFS-NDCFD 127 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~fD 127 (259)
.++...+.++.+|||+|||+|..+..+++.+. +|+++|+|+.+++.++++ .++++++++|+ ..++++ +++||
T Consensus 40 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD 113 (226)
T 3m33_A 40 LWLSRLLTPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFG 113 (226)
T ss_dssp HHHHHHCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEE
T ss_pred HHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEE
Confidence 44444567889999999999999999999976 999999999999999988 24789999999 456766 78999
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
+|+++. +...+++++.++|||||.++.
T Consensus 114 ~v~~~~---------------------~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 114 LIVSRR---------------------GPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEEES---------------------CCSGGGGGHHHHEEEEEEEEE
T ss_pred EEEeCC---------------------CHHHHHHHHHHHcCCCcEEEE
Confidence 999862 123678899999999999993
No 144
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.56 E-value=1.8e-14 Score=121.81 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=88.3
Q ss_pred CCCcEEEEcCCC---CcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----------CC
Q 025039 58 PNSSVLELGCGN---SRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----------FS 122 (259)
Q Consensus 58 ~~~~vLDiGcG~---G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----------~~ 122 (259)
+..+|||+|||+ |..+..+.+..+. +|+++|+|+.|++.+++++... ++++++++|+.+.. ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD--PNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC--TTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC--CCeEEEEeeCCCchhhhccchhhccCC
Confidence 347999999999 9887777666554 9999999999999999988542 46999999997631 22
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
..+||+|++..++|++ ...+...+++++.++|+|||+|++.++..
T Consensus 155 ~~~~d~v~~~~vlh~~-------------~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYL-------------SPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TTSCCEEEETTTGGGS-------------CTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCEEEEEechhhhC-------------CcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3479999999999987 22257899999999999999999987764
No 145
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=1.1e-14 Score=126.23 Aligned_cols=117 Identities=17% Similarity=0.168 Sum_probs=91.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC--eEEEEcccCCCcC----CCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLDLPF----SNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~~~----~~~~fD~V~ 130 (259)
.++.+|||+|||+|..++.++..|. +|+++|+|+.+++.|++++..+++.+ +.++++|+.+... ..++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999999999888 99999999999999999999888764 8999999877431 146899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++.+....... ... .....+...++..+.++|+|||.+++....
T Consensus 231 ~dPP~~~~~~~-~~~----~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTH-GEV----WQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTT-CCE----EEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCch-HHH----HHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 97663221000 000 023467789999999999999997775543
No 146
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=3.7e-14 Score=116.94 Aligned_cols=103 Identities=25% Similarity=0.226 Sum_probs=85.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-CceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++.+..+|+++|+++.+++.+++++...+++++.+..+|+. .+++. ..||+|++..+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-KGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-GCCGGGCCEEEEEECSB
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc-cCCCCCCCccEEEECCc
Confidence 45788999999999999999998863489999999999999999998888878999999973 23333 35999999888
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++++ .+++.++|+|||++++.....
T Consensus 168 ~~~~---------------------~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 168 APKI---------------------PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp BSSC---------------------CHHHHHTEEEEEEEEEEECSS
T ss_pred HHHH---------------------HHHHHHhcCCCcEEEEEEecC
Confidence 7654 136789999999999976543
No 147
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.55 E-value=1.9e-14 Score=124.13 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=87.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC--eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT--AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|.++..+++.+.. +|+++|+++.+++.|++++...+++++.+..+|+.+.....++||+|++..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcC
Confidence 457899999999999999999988651 599999999999999999998888789999999987544457899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++++ . +.+.++|||||++++...
T Consensus 153 ~~~~~-------------~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 153 GVDEV-------------P--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp BBSCC-------------C--------HHHHHHEEEEEEEEEEBC
T ss_pred CHHHH-------------H--------HHHHHhcCCCcEEEEEEC
Confidence 88766 1 467889999999998753
No 148
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.55 E-value=3.3e-15 Score=121.66 Aligned_cols=111 Identities=17% Similarity=0.221 Sum_probs=82.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHH----HHHhhcCCCCeEEEEcccCCCcCCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQ----ERLLLKGYKEVKVLEADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~----~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 130 (259)
..++.+|||+|||+|..+..+++.++. +|+|+|+|+.|++.+. ++....+.+++.+.++|+.++++.++. |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 457889999999999999999998654 9999999999888643 333445667899999999998877666 8777
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
...+..... .+...+...+++++.++|||||.+++..
T Consensus 104 ~~~~~~~~~----------~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 104 VLMPWGSLL----------RGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EESCCHHHH----------HHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccchhhh----------hhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 332211100 0011223689999999999999999853
No 149
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.55 E-value=1.5e-14 Score=126.35 Aligned_cols=104 Identities=17% Similarity=0.293 Sum_probs=87.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ +++.|+++++.+++ ++++++.+|+.+++.+ ++||+|++..++
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 126 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCB
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCch
Confidence 46789999999999999999998766999999996 88999999988887 4699999999887655 689999998877
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
+++ ..+.....+..+.++|+|||.+++
T Consensus 127 ~~~-------------~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 127 YML-------------FNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp TTB-------------TTTSHHHHHHHGGGGEEEEEEEES
T ss_pred hcC-------------ChHHHHHHHHHHHhhcCCCeEEEE
Confidence 665 123455677889999999999985
No 150
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.55 E-value=2.4e-14 Score=124.94 Aligned_cols=107 Identities=15% Similarity=0.275 Sum_probs=93.0
Q ss_pred CCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCc-CCCCceeEEEeccee
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLP-FSNDCFDVVIEKATM 135 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~~~fD~V~~~~~l 135 (259)
+.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...+..+ +++..+|+.+.+ +..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999998766 9999999 889999999988777654 999999998865 134569999999999
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|++ +.++...+++++.++|+|||++++.++.
T Consensus 259 h~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 259 HYF-------------DAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GGS-------------CHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccC-------------CHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 877 4566789999999999999999998754
No 151
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.55 E-value=4.9e-14 Score=115.89 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=82.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC----CcCCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD----LPFSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~V~ 130 (259)
+.++.+|||+|||+|..+..+++... .+|+++|+|+.+++.+++++... +++.++.+|+.+ .++. ++||+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~-~~~D~v~ 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIV-EKVDVIY 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTS-CCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccC-ccEEEEE
Confidence 45778999999999999999998843 39999999999999999987655 579999999987 5555 6899998
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
.. + ........+++++.++|+|||.+++.
T Consensus 149 ~~-----~------------~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 ED-----V------------AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EC-----C------------CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ee-----c------------CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 32 1 02234567899999999999999996
No 152
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.55 E-value=2.6e-14 Score=120.56 Aligned_cols=110 Identities=14% Similarity=0.171 Sum_probs=92.2
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeE
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDV 128 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~ 128 (259)
..+...+.++.+|||+|||+|.+++.++..|..+|+++|+++.+++.++++++.+++.+ ++++++|..++. ..+.||.
T Consensus 117 ~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~ 195 (278)
T 3k6r_A 117 VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADR 195 (278)
T ss_dssp HHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEE
T ss_pred HHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCE
Confidence 34455677899999999999999999999986699999999999999999999999876 999999998876 3468999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+++.+.. ..+++..+.++|+|||++.+.++.
T Consensus 196 Vi~~~p~~-------------------~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 196 ILMGYVVR-------------------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEECCCSS-------------------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCCCc-------------------HHHHHHHHHHHcCCCCEEEEEeee
Confidence 99765432 135788888999999999876653
No 153
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3.3e-14 Score=111.83 Aligned_cols=103 Identities=14% Similarity=0.224 Sum_probs=86.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
..++.+|||+|||+|..+..+++.+. +++++|+++.+++.+++++...+++++.+.++|+.+ +++.++||+|++..+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAKRCK-FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHTTSS-EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-
Confidence 35678999999999999999998433 999999999999999999998887779999999877 555578999998766
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+ ....+++.+.++ |||.+++..+...
T Consensus 110 ~------------------~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 110 K------------------NIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp S------------------CHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred c------------------cHHHHHHHHhhC--CCCEEEEEecccc
Confidence 2 235788888888 9999999876543
No 154
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.54 E-value=2.7e-14 Score=119.94 Aligned_cols=108 Identities=25% Similarity=0.418 Sum_probs=87.6
Q ss_pred HHHhhcccC-CCCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCc
Q 025039 48 FRHLVQPHI-KPNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDC 125 (259)
Q Consensus 48 ~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 125 (259)
+...+...+ .++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++. +++.+..+|+.++++++++
T Consensus 74 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~ 148 (269)
T 1p91_A 74 IVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSDTS 148 (269)
T ss_dssp HHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCTTC
T ss_pred HHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCCCc
Confidence 344444433 5678999999999999999998732 29999999999999998874 3688999999888877789
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
||+|++..+. ..++++.++|+|||.+++.++...+
T Consensus 149 fD~v~~~~~~----------------------~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 149 MDAIIRIYAP----------------------CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp EEEEEEESCC----------------------CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred eeEEEEeCCh----------------------hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 9999985432 2578999999999999999876544
No 155
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=2.5e-14 Score=119.13 Aligned_cols=104 Identities=19% Similarity=0.206 Sum_probs=85.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCC-CcC--CCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLD-LPF--SNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~-~~~--~~~~fD~V~ 130 (259)
.++.+|||+|||+|..+..+++..+ . +|+++|+++.+++.|++++...++. ++++.++|+.+ ++. ..++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4678999999999999999998843 2 9999999999999999999988886 59999999866 232 234899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+.... .....+++++.++|+|||++++...
T Consensus 142 ~d~~~------------------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDADK------------------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSCG------------------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCch------------------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 75432 3456789999999999999998654
No 156
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.54 E-value=3.4e-14 Score=124.38 Aligned_cols=107 Identities=19% Similarity=0.299 Sum_probs=92.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|..+..+++.++. +++++|+ +.+++.+++++...++. ++++..+|+.+ +++. .||+|++..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 46789999999999999999998766 8999999 99999999998887765 59999999876 3333 4999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++++ ...+...+++++.++|+|||++++.++.
T Consensus 259 l~~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 259 LLNW-------------PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccCC-------------CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 8876 3455678999999999999999998766
No 157
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.54 E-value=1.6e-14 Score=118.63 Aligned_cols=112 Identities=18% Similarity=0.141 Sum_probs=80.3
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCC-HHHHHHH---HHHHhhcCCCCeEEEEcccCCCcCC-CCceeEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLS-AVAVEKM---QERLLLKGYKEVKVLEADMLDLPFS-NDCFDVV 129 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s-~~~~~~a---~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~V 129 (259)
..++.+|||+|||+|..+..+++..+. +|+|+|+| +.|++.| ++++...+++++.+.++|+.+++.. .+.+|.|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEE
Confidence 457789999999999999999976555 89999999 6677666 8887777888899999999887521 1345555
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.++.+..... .....+...+++++.++|||||.++++.
T Consensus 102 ~~~~~~~~~~----------~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 102 SILFPWGTLL----------EYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEESCCHHHH----------HHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEeCCCcHHh----------hhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 4433221100 0000122468999999999999999843
No 158
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.54 E-value=1.6e-14 Score=126.77 Aligned_cols=103 Identities=20% Similarity=0.310 Sum_probs=86.7
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecceee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
++++|||+|||+|.+++.+++.|..+|+++|.|+ +++.|++.++.+++.+ |+++++++.++.++ ++||+|++...-.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 6889999999999999999999987999999996 8899999999999865 99999999988765 6899999854332
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 174 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 174 (259)
.++ ....+..++....++|+|||.++
T Consensus 161 ~l~------------~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLL------------HESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBT------------TTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccc------------ccchhhhHHHHHHhhCCCCceEC
Confidence 221 22356788888899999999987
No 159
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.54 E-value=1.7e-15 Score=135.26 Aligned_cols=103 Identities=22% Similarity=0.354 Sum_probs=83.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeE--EEEcccCCCcCCCCceeEEEecce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVK--VLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~--~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++ +.+... +...+...+++++++||+|++..+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v 180 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANT 180 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECCh
Confidence 4678999999999999999999988 999999999999999876 222211 222333344555689999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++|+ .++..+++++.++|||||++++..+.
T Consensus 181 l~h~---------------~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 181 LCHI---------------PYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp GGGC---------------TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHhc---------------CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9887 47889999999999999999997653
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.53 E-value=5.1e-14 Score=115.91 Aligned_cols=104 Identities=15% Similarity=0.193 Sum_probs=83.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC---CcCCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD---LPFSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD~V~ 130 (259)
+.++.+|||+|||+|..+..+++. ++. +|+++|+++.+++.+.+++..+ +++.++++|+.+ ++...++||+|+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 457889999999999999999987 333 9999999999888888777654 479999999987 334467899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+..+ .......++.++.++|+|||.+++...
T Consensus 153 ~~~~-----------------~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 153 ADVA-----------------QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp ECCC-----------------CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcCC-----------------CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 8543 113445678899999999999999543
No 161
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.53 E-value=3e-14 Score=126.55 Aligned_cols=135 Identities=17% Similarity=0.203 Sum_probs=101.4
Q ss_pred ccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCC
Q 025039 41 WLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL 119 (259)
Q Consensus 41 w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 119 (259)
++........++.....++.+|||+|||+|..+..++..|..+|+++|+++.+++.|++++..+++. +++++++|+.+.
T Consensus 200 ~f~~~~~~~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~ 279 (396)
T 2as0_A 200 FFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEE 279 (396)
T ss_dssp CCSTTHHHHHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred ccCCHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHH
Confidence 3444444445555555578899999999999999999987559999999999999999999998887 699999998764
Q ss_pred cC----CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 120 PF----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 120 ~~----~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
.. ..++||+|++.++....... ...........++..+.++|+|||.+++++++..
T Consensus 280 ~~~~~~~~~~fD~Vi~dpP~~~~~~~------~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 280 MEKLQKKGEKFDIVVLDPPAFVQHEK------DLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp HHHHHHTTCCEEEEEECCCCSCSSGG------GHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred HHHHHhhCCCCCEEEECCCCCCCCHH------HHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 21 24689999987654211000 0001225677899999999999999999887653
No 162
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.53 E-value=1.1e-14 Score=119.26 Aligned_cols=101 Identities=17% Similarity=0.328 Sum_probs=83.3
Q ss_pred CCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCC--CeEEEEcccCCC-c-CCCCceeEEEec
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDL-P-FSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~-~-~~~~~fD~V~~~ 132 (259)
+.+|||+|||+|..+..+++..+ . +|+++|+++.+++.|+++++..++. +++++++|+.+. + +.+++||+|++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 34999999999999999998632 3 9999999999999999999998886 599999998763 2 335789999975
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
... .....+++.+.++|+|||++++..
T Consensus 137 ~~~------------------~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 137 VSP------------------MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCT------------------TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CcH------------------HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 432 344578999999999999999843
No 163
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.53 E-value=3e-14 Score=116.42 Aligned_cols=108 Identities=18% Similarity=0.185 Sum_probs=85.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCC-Cc-CC----CCcee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLD-LP-FS----NDCFD 127 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~-~~-~~----~~~fD 127 (259)
.++.+|||+|||+|..+..+++... . +|+++|+++.+++.|++++...++.+ ++++++|+.+ ++ .. .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 3678999999999999999998632 2 99999999999999999999888764 9999999855 22 12 16899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|++....++ .....+++..+ ++|+|||++++.....
T Consensus 137 ~V~~d~~~~~---------------~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 137 MVFLDHWKDR---------------YLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEEECSCGGG---------------HHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEEcCCccc---------------chHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 9998765432 24555677777 9999999999865543
No 164
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.53 E-value=9.9e-14 Score=117.80 Aligned_cols=116 Identities=13% Similarity=0.173 Sum_probs=86.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCce---eEEEec
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCF---DVVIEK 132 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~f---D~V~~~ 132 (259)
++.+|||+|||+|..+..++.. +. +|+++|+|+.+++.|++++..+++.+ ++++++|+.+. ++ ++| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSN 199 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEEC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEc
Confidence 5679999999999999999988 43 99999999999999999999888875 99999999873 22 478 999998
Q ss_pred ceeeeeee--CCCCCCCCCc--hhHHHHHHHHHHHH-hcccCCcEEEEE
Q 025039 133 ATMEVLFV--NSGDPWNPQP--ETVTKVMAMLEGVH-RVLKPDGLFISV 176 (259)
Q Consensus 133 ~~l~~~~~--~~~~~~~~~~--~~~~~~~~~l~~~~-~~LkpgG~l~~~ 176 (259)
+++...-. .....|+|.. ....+...+++++. +.|+|||.+++.
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 76542210 0000021100 00011127899999 999999999985
No 165
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.53 E-value=2.9e-14 Score=126.13 Aligned_cols=135 Identities=14% Similarity=0.112 Sum_probs=101.1
Q ss_pred cccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC--CeEEEEcccCCC
Q 025039 42 LKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDL 119 (259)
Q Consensus 42 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~ 119 (259)
+...+....++...+.++.+|||+|||+|.+++.++..+..+|+++|+|+.+++.|+++++.+++. +++++++|+.+.
T Consensus 196 f~~~~~~~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~ 275 (385)
T 2b78_A 196 FLDQRQVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY 275 (385)
T ss_dssp CGGGHHHHHHHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH
T ss_pred CCcHHHHHHHHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH
Confidence 333344445555443678899999999999999999887668999999999999999999999886 799999998763
Q ss_pred -c-C--CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 120 -P-F--SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 120 -~-~--~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
+ . ...+||+|++.++...... + ..........+++..+.++|+|||.+++.+.....
T Consensus 276 l~~~~~~~~~fD~Ii~DPP~~~~~~--~----~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 276 FKYARRHHLTYDIIIIDPPSFARNK--K----EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp HHHHHHTTCCEEEEEECCCCC-----------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred HHHHHHhCCCccEEEECCCCCCCCh--h----hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 2 1 2458999998766521100 0 00134567788999999999999999998766543
No 166
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.53 E-value=8.8e-15 Score=132.80 Aligned_cols=104 Identities=17% Similarity=0.293 Sum_probs=87.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ +++.|++++..+++ ++++++.+|+.+++++ ++||+|+++.++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 36789999999999999999987655999999998 99999999988887 4599999999887654 589999998776
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
+++ ..+.....+..+.++|+|||.+++
T Consensus 235 ~~~-------------~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YML-------------FNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHH-------------TCHHHHHHHHHGGGGEEEEEEEES
T ss_pred Hhc-------------CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 554 224556677789999999999984
No 167
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=2.4e-14 Score=119.32 Aligned_cols=105 Identities=17% Similarity=0.219 Sum_probs=89.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhc-CCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLK-GYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
+.++.+|||+|||+|.++..+++. ++. +++++|+++.+++.+++++... +.+++.+..+|+.+.++++++||+|++.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC
Confidence 467889999999999999999988 543 9999999999999999998877 6567999999998876666789999973
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
. .+...+++++.++|+|||.+++.....
T Consensus 174 ~--------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 174 L--------------------MEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp S--------------------SCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred C--------------------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 2 122378999999999999999988764
No 168
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.52 E-value=2.7e-14 Score=120.66 Aligned_cols=125 Identities=12% Similarity=0.151 Sum_probs=90.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc--CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC----CCCceeEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF----SNDCFDVV 129 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~V 129 (259)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++...+++++.++++|+.+++. ..++||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 457889999999999999999985 323899999999999999999999888889999999877543 25689999
Q ss_pred Eecceeeeeee-CCCCCCCCC--chhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 130 IEKATMEVLFV-NSGDPWNPQ--PETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 130 ~~~~~l~~~~~-~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++..+....-. .....|.+. .+......++++.+.++|||||.+++.+++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 98754322100 000001000 0001234689999999999999999988754
No 169
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.52 E-value=1.5e-13 Score=121.06 Aligned_cols=134 Identities=15% Similarity=0.132 Sum_probs=97.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
..++.+|||+|||+|.+++.++..+.. +++|+|+++.+++.|++++...++ +++++.++|+.+++.++++||+|+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 567889999999999999999998865 899999999999999999999887 469999999999887778999999998
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCCCCcEEEE
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEW 199 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (259)
++........ .......++++.+.++| +|.+++++.+...+. ..+...++......
T Consensus 295 Pyg~r~~~~~-------~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~-~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 295 PYGLKIGKKS-------MIPDLYMKFFNELAKVL--EKRGVFITTEKKAIE-EAIAENGFEIIHHR 350 (373)
T ss_dssp CCC------C-------CHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHH-HHHHHTTEEEEEEE
T ss_pred CCCcccCcch-------hHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHH-HHHHHcCCEEEEEE
Confidence 8754321100 11223478889999988 566666655443332 23334444433333
No 170
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.52 E-value=2.1e-14 Score=121.26 Aligned_cols=104 Identities=17% Similarity=0.276 Sum_probs=87.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhc-CCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLK-GYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
+.++.+|||+|||+|..+..+++. ++. +++++|+++.+++.+++++... +.+++.+.++|+.+ ++++++||+|++.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD 186 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc
Confidence 457789999999999999999987 333 9999999999999999999887 76679999999987 4556789999972
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
. .+...+++++.++|+|||++++.+...
T Consensus 187 ~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 187 I--------------------PDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp C--------------------SCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred C--------------------cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 1 122478999999999999999987654
No 171
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.52 E-value=2.3e-14 Score=132.96 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=87.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC--cCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|.++..|++.|. +|+|+|+++.+++.|+..+...+..++++.++++.++ ...+++||+|+|..
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 45678999999999999999999998 8999999999999999998887755799999999876 34567899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++|+ .+ ......+..+.+.|+++|..++...
T Consensus 143 ~~ehv------------~~-~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 143 VFHHI------------VH-LHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp CHHHH------------HH-HHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred chhcC------------CC-HHHHHHHHHHHHHhccccceeeEEe
Confidence 99887 11 2222334456677788877776554
No 172
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=6.3e-14 Score=124.05 Aligned_cols=133 Identities=16% Similarity=0.192 Sum_probs=98.2
Q ss_pred ccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc
Q 025039 41 WLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP 120 (259)
Q Consensus 41 w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 120 (259)
++...+.....+...++++.+|||+|||+|..++.++..|. .|+++|+|+.+++.++++++.+++. ..+.++|+.+..
T Consensus 197 ~f~dqr~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l 274 (393)
T 4dmg_A 197 YYLDQRENRRLFEAMVRPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTL 274 (393)
T ss_dssp SCGGGHHHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHH
T ss_pred cCCCHHHHHHHHHHHhcCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHH
Confidence 33344445566666666789999999999999999999988 5999999999999999999998875 456688887632
Q ss_pred -CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 121 -FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 121 -~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
...+.||+|+++.+.... ... ..........+++..+.++|+|||.+++++++..
T Consensus 275 ~~~~~~fD~Ii~dpP~f~~---~~~---~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 275 RGLEGPFHHVLLDPPTLVK---RPE---ELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp HTCCCCEEEEEECCCCCCS---SGG---GHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHhcCCCCEEEECCCcCCC---CHH---HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 112349999987654110 000 0001234567899999999999999998887654
No 173
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.51 E-value=3.7e-14 Score=122.90 Aligned_cols=104 Identities=14% Similarity=0.205 Sum_probs=89.9
Q ss_pred CcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 60 SSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 60 ~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...++ +++++..+|+.+ +++ ++||+|++..++|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 89999999999999999988655 8999999 9999999998776554 359999999987 544 57999999999987
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+ .......+++++.++|+|||++++.+..
T Consensus 246 ~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 246 L-------------DEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp C-------------CHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 6 4456679999999999999999998764
No 174
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.51 E-value=4.5e-14 Score=110.85 Aligned_cols=120 Identities=14% Similarity=0.130 Sum_probs=85.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|.++..+++.+ +++|+|+|+.+++. .+++++.++|+.+ ++++++||+|+++.+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCCCc
Confidence 467799999999999999999988 89999999999987 1468999999987 55568999999988775
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc--cccccccCCCCCCc
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP--HFRRPFFNAPQFTW 195 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~~~ 195 (259)
..-.. ..|... .+...++.++.+.+ |||.++++..... .....++...+|..
T Consensus 90 ~~~~~--~~~~~~----~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 90 PDTDD--PIIGGG----YLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGT 143 (170)
T ss_dssp TTCCC--TTTBCC----GGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEE
T ss_pred cCCcc--ccccCC----cchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcE
Confidence 42100 001111 12345777777777 9999999875432 22223444455543
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.51 E-value=1.4e-13 Score=122.75 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=84.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcC-CCeEEEeeCCHHHHHHH-------HHHHhhcC--CCCeEEEEcccCCC--cC--
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKM-------QERLLLKG--YKEVKVLEADMLDL--PF-- 121 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a-------~~~~~~~~--~~~v~~~~~d~~~~--~~-- 121 (259)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.| ++++...+ +.+++++++|.... ++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 4578899999999999999999864 33899999999999998 88888877 56799988765431 11
Q ss_pred CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 122 SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 122 ~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
..++||+|+++..+. . .+...+|.++.++|||||.+++..
T Consensus 320 ~~~~FDvIvvn~~l~-~---------------~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 320 LIPQCDVILVNNFLF-D---------------EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp HGGGCSEEEECCTTC-C---------------HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccCCCCEEEEeCccc-c---------------ccHHHHHHHHHHhCCCCeEEEEee
Confidence 246899999865441 1 466788999999999999999874
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.51 E-value=1.1e-13 Score=117.22 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=81.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeC-CHHHHHHHHHHH-----hhcCCC-----CeEEEEcccCCCc--C--
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDL-SAVAVEKMQERL-----LLKGYK-----EVKVLEADMLDLP--F-- 121 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~-s~~~~~~a~~~~-----~~~~~~-----~v~~~~~d~~~~~--~-- 121 (259)
.++.+|||+|||+|.+++.+++.+..+|+++|+ ++.+++.+++++ ...++. ++.+...++.+.. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 467899999999999999999987658999999 899999999998 555543 5777766654421 1
Q ss_pred --CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhccc---C--CcEEEEE
Q 025039 122 --SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLK---P--DGLFISV 176 (259)
Q Consensus 122 --~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---p--gG~l~~~ 176 (259)
..++||+|++..++++. .....+++.+.++|+ | ||.++++
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~---------------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH---------------QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG---------------GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hccCCCCCEEEEeCcccCh---------------HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 35789999987776543 567789999999999 9 9988765
No 177
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.50 E-value=5.5e-14 Score=114.76 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=85.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCc--CC---CCceeE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLP--FS---NDCFDV 128 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--~~---~~~fD~ 128 (259)
.++.+|||+|||+|..+..+++..+ . +++++|+++.+++.+++++...++.+ ++++++|+.+.. +. .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 4678999999999999999999843 2 99999999999999999999888865 999999986531 11 157999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|++.... .....+++.+.++|+|||++++...
T Consensus 137 v~~d~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDADK------------------QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSCG------------------GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCCc------------------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9976542 3446899999999999999988654
No 178
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.50 E-value=3.2e-14 Score=116.26 Aligned_cols=105 Identities=11% Similarity=0.081 Sum_probs=85.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCC-c-CCC----Ccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDL-P-FSN----DCFD 127 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~-~~~----~~fD 127 (259)
.++.+|||+|||+|..+..+++..+ . +|+++|+++.+++.+++++...++.+ ++++++|+.+. + ... ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3678999999999999999998733 2 99999999999999999999888865 99999998653 2 111 6899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|++.... .....+++.+.++|+|||++++....
T Consensus 143 ~v~~~~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 143 LIYIDADK------------------ANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEECSCG------------------GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEECCCH------------------HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 99965432 34567999999999999999986543
No 179
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.50 E-value=2.5e-13 Score=111.21 Aligned_cols=102 Identities=20% Similarity=0.225 Sum_probs=81.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc---CCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~ 130 (259)
+.++.+|||+|||+|..+..+++. ++ .+|+++|+++.+++.++++++.. +++.++++|+.+.. ...++||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 457889999999999999999987 44 39999999999999999988765 57999999997732 1235899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
+..+. ......++.++.++|+|||.+++.
T Consensus 149 ~~~~~-----------------~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 149 EDVAQ-----------------PTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCCS-----------------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCC-----------------HhHHHHHHHHHHHhcCCCCEEEEE
Confidence 75431 123345699999999999999987
No 180
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.50 E-value=4e-14 Score=116.08 Aligned_cols=108 Identities=19% Similarity=0.252 Sum_probs=86.2
Q ss_pred HhhcccCCCCCcEEEEcCCCCcchHHHHhc-CC------CeEEEeeCCHHHHHHHHHHHhhcC-----CCCeEEEEcccC
Q 025039 50 HLVQPHIKPNSSVLELGCGNSRLSEGLYND-GI------TAITCIDLSAVAVEKMQERLLLKG-----YKEVKVLEADML 117 (259)
Q Consensus 50 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~------~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~ 117 (259)
..+...+.++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.+++++...+ .+++.+..+|+.
T Consensus 76 ~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 155 (227)
T 1r18_A 76 EYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR 155 (227)
T ss_dssp HHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG
T ss_pred HHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcc
Confidence 333334667899999999999999999885 32 389999999999999999987655 457999999987
Q ss_pred CCcCCC-CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 118 DLPFSN-DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 118 ~~~~~~-~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+ .++. ++||+|++..+++++ ++++.++|+|||++++....
T Consensus 156 ~-~~~~~~~fD~I~~~~~~~~~---------------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 156 K-GYPPNAPYNAIHVGAAAPDT---------------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp G-CCGGGCSEEEEEECSCBSSC---------------------CHHHHHTEEEEEEEEEEESC
T ss_pred c-CCCcCCCccEEEECCchHHH---------------------HHHHHHHhcCCCEEEEEEec
Confidence 7 3333 689999998877554 36789999999999987543
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=5.5e-14 Score=115.67 Aligned_cols=104 Identities=18% Similarity=0.246 Sum_probs=86.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCC-cCC--CCceeEEEe
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-PFS--NDCFDVVIE 131 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~~~--~~~fD~V~~ 131 (259)
.++.+|||+|||+|..+..+++..+. +++++|+++.+++.|++++...++. ++.+..+|+.+. +.. +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 36789999999999999999998543 9999999999999999999888875 499999998774 322 468999998
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..+. .+...+++.+.++|+|||++++.+.
T Consensus 133 ~~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAK------------------GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGG------------------SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCH------------------HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 6543 2456899999999999999998643
No 182
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.49 E-value=6.8e-14 Score=124.26 Aligned_cols=135 Identities=14% Similarity=0.131 Sum_probs=100.5
Q ss_pred cccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-C-CeEEEEcccC
Q 025039 40 EWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-K-EVKVLEADML 117 (259)
Q Consensus 40 ~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~-~v~~~~~d~~ 117 (259)
.+++.......++... .++.+|||+|||+|..+..+++.|..+|+++|+++.+++.|++++..+++ + +++++++|+.
T Consensus 203 gff~~~~~~~~~l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~ 281 (396)
T 3c0k_A 203 GYYLDQRDSRLATRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVF 281 (396)
T ss_dssp SSCGGGHHHHHHHHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred CcCcCHHHHHHHHHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 3444444444444443 57889999999999999999998755999999999999999999999988 6 7999999987
Q ss_pred CCcC----CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 118 DLPF----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 118 ~~~~----~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
+... ...+||+|++.++...... . .+ .........++..+.++|+|||++++.+....
T Consensus 282 ~~~~~~~~~~~~fD~Ii~dpP~~~~~~--~-~~---~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 282 KLLRTYRDRGEKFDVIVMDPPKFVENK--S-QL---MGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSTTTCS--S-SS---SCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHhcCCCCCEEEECCCCCCCCh--h-HH---HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 7421 1468999998765421100 0 00 01225677899999999999999999876653
No 183
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.49 E-value=6.7e-14 Score=123.73 Aligned_cols=133 Identities=19% Similarity=0.167 Sum_probs=99.8
Q ss_pred cccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC
Q 025039 40 EWLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL 119 (259)
Q Consensus 40 ~w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 119 (259)
.|+.........+... ++.+|||+|||+|..+..++..+ .+|+++|+++.+++.|++++..++++++.++++|+.+.
T Consensus 193 g~f~~~~~~~~~~~~~--~~~~VLDlg~G~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~ 269 (382)
T 1wxx_A 193 GAYLDQRENRLYMERF--RGERALDVFSYAGGFALHLALGF-REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL 269 (382)
T ss_dssp CCCGGGHHHHHHGGGC--CEEEEEEETCTTTHHHHHHHHHE-EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH
T ss_pred ccccchHHHHHHHHhc--CCCeEEEeeeccCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHH
Confidence 3554444444455544 78899999999999999999883 39999999999999999999999987799999998764
Q ss_pred cC----CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 120 PF----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 120 ~~----~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
.. ...+||+|++.++..... .. ...........++..+.++|+|||.+++.+++..
T Consensus 270 ~~~~~~~~~~fD~Ii~dpP~~~~~--~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 270 LRRLEKEGERFDLVVLDPPAFAKG--KK----DVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHHHHHTTCCEEEEEECCCCSCCS--TT----SHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHhcCCCeeEEEECCCCCCCC--hh----HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 21 246899999876542110 00 0012235667899999999999999999887653
No 184
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=2.6e-13 Score=119.58 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=87.4
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC-CcC-CCCceeEEEecce
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LPF-SNDCFDVVIEKAT 134 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~-~~~~fD~V~~~~~ 134 (259)
++.+|||+| |+|.++..++..++ .+|+++|+++.+++.|++++...++.+++++++|+.+ ++. .+++||+|+++.+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 578999999 99999999999887 4999999999999999999998887789999999988 553 3468999999877
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEE-EEEec
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLF-ISVSF 178 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l-~~~~~ 178 (259)
++. .....+++++.++|+|||.+ ++...
T Consensus 251 ~~~----------------~~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 251 ETL----------------EAIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SSH----------------HHHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred Cch----------------HHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 642 23588999999999999954 44433
No 185
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.49 E-value=1.5e-13 Score=130.03 Aligned_cols=134 Identities=17% Similarity=0.193 Sum_probs=101.3
Q ss_pred ccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC--CeEEEEcccCC
Q 025039 41 WLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLD 118 (259)
Q Consensus 41 w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~ 118 (259)
++...+.....+... .++.+|||+|||+|.+++.++..|..+|+++|+|+.+++.++++++.+++. +++++++|+.+
T Consensus 523 ~f~d~r~~r~~l~~~-~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~ 601 (703)
T 3v97_A 523 LFLDHRIARRMLGQM-SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 601 (703)
T ss_dssp CCGGGHHHHHHHHHH-CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH
T ss_pred CcccHHHHHHHHHHh-cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH
Confidence 444444455555543 368899999999999999999888767999999999999999999999886 59999999987
Q ss_pred C-cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 119 L-PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 119 ~-~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
. +...++||+|+++++.......... ..+...+..+++..+.++|+|||++++.+..
T Consensus 602 ~l~~~~~~fD~Ii~DPP~f~~~~~~~~----~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 602 WLREANEQFDLIFIDPPTFSNSKRMED----AFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHHHCCCCEEEEEECCCSBC-----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHhcCCCccEEEECCccccCCccchh----HHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3 3345789999998764211000000 0134578889999999999999999987655
No 186
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.48 E-value=5.2e-14 Score=117.30 Aligned_cols=81 Identities=10% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCC---cCC---CCceeEE
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDL---PFS---NDCFDVV 129 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~---~~~---~~~fD~V 129 (259)
++.+|||+|||+|.++..++...+ .+++|+|+++.+++.|++++...++.+ ++++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 567999999999999998887742 299999999999999999998888765 99999997652 333 2589999
Q ss_pred Eecceeeee
Q 025039 130 IEKATMEVL 138 (259)
Q Consensus 130 ~~~~~l~~~ 138 (259)
+++.+++..
T Consensus 145 ~~npp~~~~ 153 (254)
T 2h00_A 145 MCNPPFFAN 153 (254)
T ss_dssp EECCCCC--
T ss_pred EECCCCccC
Confidence 999887543
No 187
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.48 E-value=7.1e-14 Score=118.02 Aligned_cols=105 Identities=20% Similarity=0.290 Sum_probs=87.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhc-C--CCCeEEEEcccCCCcCCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLK-G--YKEVKVLEADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~fD~V~ 130 (259)
+.++.+|||+|||+|.++..+++. ++. +++++|+++.+++.|++++... + .+++.+.++|+.+.++++++||+|+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEE
Confidence 567889999999999999999985 433 9999999999999999998876 5 4579999999988776677899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+... +...+++++.++|+|||.+++.+...
T Consensus 177 ~~~~--------------------~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 177 LDML--------------------APWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp EESS--------------------CGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ECCc--------------------CHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7321 22368999999999999999987653
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.47 E-value=6e-14 Score=113.59 Aligned_cols=101 Identities=22% Similarity=0.216 Sum_probs=82.9
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCC-cCCCCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDL-PFSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~~~~~~fD~V~~~~ 133 (259)
++.+|||+|||+|..+..+++..+ . +++++|+++.+++.|++++...++.+ ++++++|+.+. +...+ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 568999999999999999998743 2 99999999999999999988877654 89999998663 33345 99999753
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.. .....+++++.++|+|||++++..
T Consensus 135 ~~------------------~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 DV------------------FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT------------------SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred Ch------------------hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 21 345689999999999999999854
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.47 E-value=1.4e-13 Score=117.30 Aligned_cols=108 Identities=22% Similarity=0.335 Sum_probs=81.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhc-----CCCCeEEEEcccCCC-cCCCCceeEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLK-----GYKEVKVLEADMLDL-PFSNDCFDVV 129 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~-----~~~~v~~~~~d~~~~-~~~~~~fD~V 129 (259)
+++.+|||+|||+|..+..+++.... +|+++|+++.+++.|++++... .-++++++.+|+.+. ....++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45789999999999999999987433 8999999999999999987654 234689999998774 3345789999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCcEEEEEe
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 177 (259)
++...-... ..... .++++.+.++|+|||++++..
T Consensus 162 i~D~~~p~~-------------~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIG-------------PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC-----------------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccC-------------cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 985432110 11122 679999999999999999865
No 190
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.47 E-value=4.6e-13 Score=110.12 Aligned_cols=103 Identities=16% Similarity=0.100 Sum_probs=77.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc---CCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~ 130 (259)
+.++.+|||+|||+|..+..+++. ++. +|+++|+++.+++.+.+..... +++.++++|+.... ...++||+|+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEEE
Confidence 568899999999999999999886 434 9999999999976665544433 47999999987632 1236899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
++.+. ......++..+.++|||||.|++..
T Consensus 152 ~d~a~-----------------~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 152 VDIAQ-----------------PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp ECCCC-----------------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecCCC-----------------hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 86442 0223344556667999999999874
No 191
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=9.4e-14 Score=117.34 Aligned_cols=104 Identities=15% Similarity=0.234 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
+.++.+|||+|||+|.++..+++. ++. +++++|+++.+++.|++++...++ +++.+..+|+.+. ++.++||+|+++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC
Confidence 457889999999999999999988 544 999999999999999999988776 4689999998875 455789999974
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.. +...+++.+.++|+|||.+++.....
T Consensus 189 ~~--------------------~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 189 VP--------------------DPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp CS--------------------CGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred Cc--------------------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 21 22368999999999999999987653
No 192
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.46 E-value=1.5e-13 Score=120.85 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=86.3
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.+..+|||+|||+|..+..+++..+. +++++|+ +.+++.++++ ++++++.+|+.+ +++.+ |+|++..+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~p~~--D~v~~~~v 270 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFD-GVPKG--DAIFIKWI 270 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCCCC--SEEEEESC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCC-CCCCC--CEEEEech
Confidence 345689999999999999999998776 8999999 8888776542 479999999987 55543 99999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|++ +.++..++|++++++|+|||++++.+...
T Consensus 271 lh~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 271 CHDW-------------SDEHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp GGGB-------------CHHHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred hhcC-------------CHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9887 55677899999999999999999987653
No 193
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.46 E-value=1.7e-14 Score=119.82 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=85.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCC------CCcee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFS------NDCFD 127 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~------~~~fD 127 (259)
.++.+|||+|||+|..+..+++..+ . +|+++|+++.+++.|++++...++. +++++++|+.+.... .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3578999999999999999998643 2 9999999999999999999988875 599999998763211 47899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|++.... .....+++.+.++|+|||++++...
T Consensus 139 ~V~~d~~~------------------~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDADK------------------TNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEESCG------------------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcCCh------------------HHhHHHHHHHHHhcCCCeEEEEECC
Confidence 99975432 3456789999999999999998644
No 194
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.46 E-value=3.3e-13 Score=122.32 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=92.3
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC-CCCceeEEEecce
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-SNDCFDVVIEKAT 134 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~~~ 134 (259)
++.+|||+|||+|..+..+++... ..|+++|+++.+++.++++++..+++++.++++|+.+++. ..++||+|++..+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 789999999999999999998732 3899999999999999999999998889999999987653 3568999998543
Q ss_pred ee---eeeeCCCCCCCCCchhH----HHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 ME---VLFVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~---~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.. .+..++...|.-.++.. ....++|.++.++|||||++++.+++
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 21 11111222222111121 22457899999999999999998875
No 195
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.46 E-value=1.5e-13 Score=119.94 Aligned_cols=106 Identities=19% Similarity=0.207 Sum_probs=84.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
+.++.+|||+|||+|..+..+++..+. +++++|+ +.++. +++....+. +++++..+|+.+ +.+ +||+|++..
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p--~~D~v~~~~ 255 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP--HADVHVLKR 255 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC--CCcEEEEeh
Confidence 356789999999999999999998776 8999999 45554 333333333 359999999973 444 899999999
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
++|++ ...+...+|++++++|||||++++.+...
T Consensus 256 vlh~~-------------~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 256 ILHNW-------------GDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp CGGGS-------------CHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred hccCC-------------CHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 99877 44566899999999999999999987643
No 196
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.46 E-value=5.1e-14 Score=109.90 Aligned_cols=105 Identities=25% Similarity=0.280 Sum_probs=82.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--------CCCCc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDC 125 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~ 125 (259)
+.++.+|||+|||+|..+..+++. ++. +++++|+++ +++. +++.+..+|+.+.+ +++++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCc
Confidence 567889999999999999999988 553 999999998 6432 46899999998765 56678
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHH------HHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTK------VMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
||+|+++.+++... . ..... ...+++++.++|+|||.+++.++...
T Consensus 89 ~D~i~~~~~~~~~~---------~-~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 89 VQVVMSDMAPNMSG---------T-PAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp EEEEEECCCCCCCS---------C-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred eeEEEECCCccccC---------C-CccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 99999988776441 0 01111 26899999999999999999877554
No 197
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.46 E-value=2.2e-13 Score=112.79 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=86.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++...++ +++.+..+|+.+...++++||+|++...
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEVAG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR 167 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS
T ss_pred CCCCCEEEEeCCCccHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc
Confidence 35788999999999999999998844 999999999999999999988776 4689999998875435568999997321
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+...+++.+.++|+|||.+++.....
T Consensus 168 --------------------~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 168 --------------------EPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp --------------------CGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred --------------------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 22467899999999999999987653
No 198
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.46 E-value=2.6e-13 Score=122.39 Aligned_cols=125 Identities=20% Similarity=0.276 Sum_probs=93.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCCCceeEEEe
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIE 131 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~ 131 (259)
..++.+|||+|||+|..+..+++... .+++++|+++.+++.+++++...+++++.+.++|+.+++ +++++||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 56788999999999999999998632 389999999999999999999988878999999998765 44468999997
Q ss_pred cceeeee---eeCCCCCCCCCchhHHH----HHHHHHHHHhcccCCcEEEEEecCC
Q 025039 132 KATMEVL---FVNSGDPWNPQPETVTK----VMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 132 ~~~l~~~---~~~~~~~~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
..+.... ...+...|...+..... ...+++.+.++|||||.+++++++.
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 5432111 11111112111112211 2678999999999999999988764
No 199
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.46 E-value=2.6e-13 Score=116.30 Aligned_cols=110 Identities=22% Similarity=0.297 Sum_probs=83.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhh----cCCCCeEEEEcccCCCcC--CCCceeEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLL----KGYKEVKVLEADMLDLPF--SNDCFDVV 129 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~~~d~~~~~~--~~~~fD~V 129 (259)
+++.+|||+|||+|..+..+++.... +++++|+++.+++.+++++.. ...++++++.+|+.+... .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 56789999999999999999987433 999999999999999998732 122469999999877542 36789999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCcEEEEEecC
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++..+.... ....+ .++++.+.++|+|||++++...+
T Consensus 174 i~d~~~~~~-------------~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 174 IIDTTDPAG-------------PASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEECC----------------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCCCccc-------------cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 986543211 11122 58999999999999999987543
No 200
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.45 E-value=3.8e-13 Score=116.76 Aligned_cols=105 Identities=18% Similarity=0.167 Sum_probs=81.9
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcC-----------CCCeEEEEcccCCC--c
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKG-----------YKEVKVLEADMLDL--P 120 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~-----------~~~v~~~~~d~~~~--~ 120 (259)
+.++.+|||+|||+|.++..+++. |+. +|+++|+++.+++.|++++...+ ..++++..+|+.+. +
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 567899999999999999999987 663 99999999999999999987532 24699999999875 3
Q ss_pred CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 121 FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 121 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++++||+|++.... ...++.++.++|+|||.+++.....
T Consensus 183 ~~~~~fD~V~~~~~~--------------------~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 183 IKSLTFDAVALDMLN--------------------PHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp -----EEEEEECSSS--------------------TTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred cCCCCeeEEEECCCC--------------------HHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 456689999974321 1137899999999999999877654
No 201
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.45 E-value=2.3e-13 Score=109.22 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=75.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|..+..+++.+..+++++|+++.+++.+++++. +++++++|+.+++ ++||+|+++++++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---GKYDTWIMNPPFG 121 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC---CCEEEEEECCCC-
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC---CCeeEEEECCCch
Confidence 4678999999999999999998865479999999999999999864 6899999998864 6899999999987
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
+. .......+++++.+++ |+++++.
T Consensus 122 ~~-------------~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 122 SV-------------VKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp -------------------CHHHHHHHHHHE--EEEEEEE
T ss_pred hc-------------cCchhHHHHHHHHHhc--CcEEEEE
Confidence 76 1122357888888888 4544433
No 202
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.45 E-value=1.5e-13 Score=123.75 Aligned_cols=123 Identities=18% Similarity=0.169 Sum_probs=92.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-CCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~ 132 (259)
..++.+|||+|||+|..+..+++... .+|+++|+++.+++.+++++...++. +.++++|+.+++ ...++||+|++.
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 45789999999999999999998733 28999999999999999999999987 999999987754 235789999975
Q ss_pred ceee---eeeeCCCCCCCCCchhH----HHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 133 ATME---VLFVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 133 ~~l~---~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.+.. .+..++...|.-.+... ....++|+.+.++|||||+|++.+++
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 4421 11111222222222222 23378999999999999999998775
No 203
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.45 E-value=4.8e-13 Score=116.98 Aligned_cols=107 Identities=18% Similarity=0.195 Sum_probs=91.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
.+..+|||+|||+|..+..++++.+. +++..|. +.+++.+++++...+.++++++.+|+++.+.+ .+|+|++..++
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 35679999999999999999999887 8889997 88999999988766666799999999875543 57999999999
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|.+ +.++..++|++++++|+|||++++++.-
T Consensus 255 h~~-------------~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 255 HDW-------------ADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp GGS-------------CHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ccC-------------CHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 887 5577889999999999999999998764
No 204
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.44 E-value=5.4e-13 Score=107.48 Aligned_cols=101 Identities=21% Similarity=0.228 Sum_probs=82.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|..+..+++.+..+++|+|+++.+++.+++++...++ ++.++++|+.+++ ++||+|+++.+++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 46789999999999999999998765899999999999999999988876 7999999998864 4899999998876
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
... ......+++.+.+++ ||.+++.
T Consensus 124 ~~~-------------~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 124 SQR-------------KHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSS-------------TTTTHHHHHHHHHHC--SEEEEEE
T ss_pred ccc-------------CCchHHHHHHHHHhc--CcEEEEE
Confidence 541 122356788888888 5544433
No 205
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.44 E-value=2.1e-13 Score=119.74 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=86.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
..+..+|||+|||+|..+..+++..+. +++++|+ +.+++.+++. ++++++.+|+.+ +++.+ |+|++..+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~D~~~-~~p~~--D~v~~~~v 268 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF------PGVTHVGGDMFK-EVPSG--DTILMKWI 268 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCCCC--SEEEEESC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc------CCeEEEeCCcCC-CCCCC--CEEEehHH
Confidence 446789999999999999999998776 8999999 8888776542 479999999987 66643 99999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|++ +.++...+|++++++|+|||++++.+...
T Consensus 269 lh~~-------------~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 269 LHDW-------------SDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred hccC-------------CHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9877 55678899999999999999999987643
No 206
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=3.5e-13 Score=118.16 Aligned_cols=109 Identities=18% Similarity=0.302 Sum_probs=83.3
Q ss_pred hHHHHhhcccCCCCCcEEEEcCC------CCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccC
Q 025039 46 SHFRHLVQPHIKPNSSVLELGCG------NSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML 117 (259)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLDiGcG------~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 117 (259)
..+..++.....++.+||||||| +|..+..+++. .+. +|+|+|+|+.|. . ..++++++++|+.
T Consensus 204 ~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---~~~rI~fv~GDa~ 274 (419)
T 3sso_A 204 PHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---DELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---CBTTEEEEECCTT
T ss_pred HHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---cCCCcEEEEeccc
Confidence 34555565555678899999999 66666666654 333 999999999872 1 2257999999999
Q ss_pred CCcCC------CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 118 DLPFS------NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 118 ~~~~~------~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++++. +++||+|++.+. ++. .+...+|+++.++|||||++++.+..
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgs-H~~---------------~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGS-HIN---------------AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSC-CCH---------------HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccchhhhhhcccCCccEEEECCc-ccc---------------hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 87665 579999998753 322 57789999999999999999997653
No 207
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.44 E-value=3.1e-13 Score=117.43 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=87.4
Q ss_pred ccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEec
Q 025039 54 PHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
..+.++.+|||+|||+|.+++. ++ +..+|+++|+|+.+++.+++++..+++. +++++++|+.+.. ++||+|+++
T Consensus 191 ~~~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~d 265 (336)
T 2yx1_A 191 KKVSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMN 265 (336)
T ss_dssp HHCCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEEC
T ss_pred HhcCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEEC
Confidence 3456789999999999999999 77 4449999999999999999999999884 6999999998765 689999986
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
.+.. ...++..+.++|+|||.+++.+++..
T Consensus 266 pP~~-------------------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 266 LPKF-------------------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CTTT-------------------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CcHh-------------------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 4321 12788999999999999999877654
No 208
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.44 E-value=4.2e-13 Score=107.57 Aligned_cols=110 Identities=12% Similarity=0.217 Sum_probs=78.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC--C-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------------
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI--T-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------------ 120 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------------ 120 (259)
+.++.+|||+|||+|..+..+++..+ . +|+|+|+++.+ ..+++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 56788999999999999999998754 3 89999999831 2246899999998765
Q ss_pred -------------CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 121 -------------FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 121 -------------~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+++++||+|+++.++++.... .............+++++.++|+|||.+++..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~----~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK----IDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH----HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc----ccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 455789999998766542000 00000001112358999999999999999876654
No 209
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.43 E-value=1.7e-13 Score=120.70 Aligned_cols=101 Identities=23% Similarity=0.298 Sum_probs=85.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++.++. +++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++..+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~--~D~v~~~~~ 276 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SVPQ--GDAMILKAV 276 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCC--EEEEEEESS
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CCCC--CCEEEEecc
Confidence 356789999999999999999999876 8999999 988887764 2469999999987 5553 999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|++ .......+|++++++|+|||++++.++.
T Consensus 277 lh~~-------------~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 277 CHNW-------------SDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccC-------------CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9877 3455669999999999999999998653
No 210
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.43 E-value=1.6e-13 Score=114.13 Aligned_cols=103 Identities=12% Similarity=0.097 Sum_probs=84.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCC-c-C-----CCCce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-F-----SNDCF 126 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~-~-----~~~~f 126 (259)
.++.+|||+|||+|..+..+++..+ . +++++|+++.+++.|++++...++. +++++.+|+.+. + + ..++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3568999999999999999998743 2 9999999999999999999888874 599999998653 2 1 14789
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
|+|++.... .....+++.+.++|+|||++++..
T Consensus 158 D~V~~d~~~------------------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK------------------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS------------------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch------------------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 999975431 345688999999999999999854
No 211
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.43 E-value=1.9e-13 Score=112.99 Aligned_cols=104 Identities=17% Similarity=0.207 Sum_probs=85.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCC-c------------
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDL-P------------ 120 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~------------ 120 (259)
.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.|++++...++.+ +.+..+|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4678999999999999999998843 299999999999999999998888765 99999987652 2
Q ss_pred --CC-C-CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 121 --FS-N-DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 121 --~~-~-~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++ . ++||+|++.... .....+++.+.++|+|||++++...
T Consensus 139 ~~f~~~~~~fD~I~~~~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK------------------ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG------------------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccccCCCCCcCEEEEeCCH------------------HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 11 2 689999976432 3446889999999999999998653
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=5.1e-13 Score=110.03 Aligned_cols=104 Identities=16% Similarity=0.105 Sum_probs=84.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCC----cCCC--Ccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDL----PFSN--DCFD 127 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~----~~~~--~~fD 127 (259)
.++.+|||+|||+|..+..+++..+ . +++++|+++.+++.|++++...++.+ +++..+|+.+. +..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3578999999999999999998743 2 99999999999999999998888754 99999987542 2222 6899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|++.... .....+++.+.++|+|||++++...
T Consensus 151 ~V~~d~~~------------------~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDADK------------------RNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSCG------------------GGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCCH------------------HHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 99975431 3456789999999999999998654
No 213
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=1.9e-13 Score=109.41 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=79.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC--------C---CC
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF--------S---ND 124 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------~---~~ 124 (259)
++++.+|||+|||+|..+..+++.+. +|+|+|+++.. ..++++++++|+.+... . .+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCS-EEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCC-cEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 56789999999999999999999854 99999999741 23578999999987541 1 14
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
+||+|++++..... +...............+++.+.++|||||.|++..+..+.
T Consensus 91 ~~D~Vlsd~~~~~~----g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 91 KVDDVVSDAMAKVS----GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp SEEEEEECCCCCCC----SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred cceEEecCCCcCCC----CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 89999997643221 0000000012233467889999999999999998776543
No 214
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.41 E-value=3.5e-13 Score=117.72 Aligned_cols=101 Identities=14% Similarity=0.197 Sum_probs=84.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++. +++++..+|+.+ +++ .||+|++..+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~p--~~D~v~~~~~ 255 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------NNLTYVGGDMFT-SIP--NADAVLLKYI 255 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------TTEEEEECCTTT-CCC--CCSEEEEESC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------CCcEEEeccccC-CCC--CccEEEeehh
Confidence 346789999999999999999988665 8999999 9998877642 469999999976 544 3999999999
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccC---CcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP---DGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 179 (259)
+|++ .......++++++++|+| ||++++.++.
T Consensus 256 lh~~-------------~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 256 LHNW-------------TDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred hccC-------------CHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 9877 344566999999999999 9999998754
No 215
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.41 E-value=3e-13 Score=110.72 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=84.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCC-c-CCC----Ccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-FSN----DCFD 127 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~-~~~----~~fD 127 (259)
.++.+|||+|||+|..+..+++..+ . +++++|+++.+++.+++++...++. +++++++|+.+. + +.. ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4678999999999999999998743 2 9999999999999999999888774 599999988653 1 111 6899
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|++.... .....+++.+.++|+|||++++...
T Consensus 148 ~v~~d~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDADK------------------ENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSCS------------------TTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCH------------------HHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99985431 3456789999999999999998643
No 216
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.41 E-value=3.9e-13 Score=120.84 Aligned_cols=125 Identities=16% Similarity=0.112 Sum_probs=91.2
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcC-C-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-CCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDG-I-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~ 132 (259)
..++.+|||+|||+|..+..+++.. . .+|+++|+++.+++.++++++..++.++.+.++|..++. ...++||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 4678999999999999999998862 2 389999999999999999999999988999999987754 234789999976
Q ss_pred ceeeee---eeCCCCCCCCCchhH----HHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVL---FVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~---~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.+-... ..++...|...+... ....++|..+.++|||||.|++++++.
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 542111 000000000001111 233488999999999999999988753
No 217
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.41 E-value=4.8e-13 Score=115.99 Aligned_cols=109 Identities=18% Similarity=0.311 Sum_probs=83.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhc--CC--CCeEEEEcccCCC-c-CCCCceeEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLK--GY--KEVKVLEADMLDL-P-FSNDCFDVV 129 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~-~-~~~~~fD~V 129 (259)
+++.+|||+|||+|..+..+++..+. +|+++|+++.+++.|++++... ++ ++++++.+|+.+. + .+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 46789999999999999999987543 9999999999999999987642 22 4699999998763 2 335689999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
++...- ++.+ ...-...++++.+.++|+|||++++.
T Consensus 199 i~d~~~---------p~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSD---------PIGP--AKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCC---------TTSG--GGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCC---------ccCc--chhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 985431 1100 01011368999999999999999986
No 218
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.41 E-value=3.9e-13 Score=111.10 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=84.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-C-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCC-c-C-----CCCce
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-T-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDL-P-F-----SNDCF 126 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~-~-----~~~~f 126 (259)
.++.+|||+|||+|..+..+++..+ . +++++|+++.+++.|++++...++.+ ++++.+|+.+. + + +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3578999999999999999998743 2 99999999999999999998888754 99999998763 2 2 14689
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
|+|++... ......+++.+.++|+|||++++..
T Consensus 149 D~I~~d~~------------------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD------------------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC------------------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc------------------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99997532 1355789999999999999999864
No 219
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.40 E-value=5.6e-13 Score=111.67 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=83.4
Q ss_pred CcEEEEcCCC--CcchHHHHh-cCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--C--C--CCcee--
Q 025039 60 SSVLELGCGN--SRLSEGLYN-DGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--F--S--NDCFD-- 127 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~-~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~--~--~~~fD-- 127 (259)
.+|||+|||+ +..+..+++ ..+. +|+++|.|+.|++.|++++...+..+++++++|+.+.. + + .+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 6899999997 444555544 3444 99999999999999999987544335899999998742 0 1 24455
Q ss_pred ---EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCc
Q 025039 128 ---VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 181 (259)
Q Consensus 128 ---~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 181 (259)
.|+++.+||++ ...++...++.++.+.|+|||+|++......
T Consensus 160 ~p~av~~~avLH~l------------~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 160 RPVALTVIAIVHFV------------LDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp SCCEEEEESCGGGS------------CGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcchHHhhhhHhcC------------CchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 58889999988 2223367899999999999999999876643
No 220
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.40 E-value=3.9e-13 Score=109.01 Aligned_cols=97 Identities=26% Similarity=0.502 Sum_probs=77.7
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCcee
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFD 127 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 127 (259)
+...+.. ..++.+|||+|||+|..+..++ . +++++|+++. ++.+.++|+.++++++++||
T Consensus 58 ~~~~l~~-~~~~~~vLDiG~G~G~~~~~l~---~-~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD 117 (215)
T 2zfu_A 58 IARDLRQ-RPASLVVADFGCGDCRLASSIR---N-PVHCFDLASL---------------DPRVTVCDMAQVPLEDESVD 117 (215)
T ss_dssp HHHHHHT-SCTTSCEEEETCTTCHHHHHCC---S-CEEEEESSCS---------------STTEEESCTTSCSCCTTCEE
T ss_pred HHHHHhc-cCCCCeEEEECCcCCHHHHHhh---c-cEEEEeCCCC---------------CceEEEeccccCCCCCCCEe
Confidence 3444432 3567899999999999988772 3 8999999986 35678899988887778999
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|++..++++ .+...+++++.++|+|||.+++.++..
T Consensus 118 ~v~~~~~l~~----------------~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 118 VAVFCLSLMG----------------TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp EEEEESCCCS----------------SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred EEEEehhccc----------------cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 9999888752 255789999999999999999987654
No 221
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.40 E-value=5.8e-13 Score=114.65 Aligned_cols=113 Identities=18% Similarity=0.189 Sum_probs=84.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhc--C---CCCeEEEEcccCCC-cCCCCceeEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLK--G---YKEVKVLEADMLDL-PFSNDCFDVV 129 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~---~~~v~~~~~d~~~~-~~~~~~fD~V 129 (259)
+++.+|||+|||+|..+..+++.... +++++|+++.+++.|++++... + -++++++.+|+.+. +...++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999987433 9999999999999999987541 1 25699999998763 3345789999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
++....+.. ...+...-...++++.+.++|+|||++++..
T Consensus 156 i~d~~~~~~--------~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVG--------EDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBS--------TTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccc--------ccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 986543210 0000000013689999999999999999864
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.40 E-value=5.3e-13 Score=113.12 Aligned_cols=106 Identities=15% Similarity=0.267 Sum_probs=81.3
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc--C---------CCCeEEEEcccCCC-cCCCC
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK--G---------YKEVKVLEADMLDL-PFSND 124 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~---------~~~v~~~~~d~~~~-~~~~~ 124 (259)
.++.+|||+|||+|..+..+++.+..+++++|+++.+++.|++++ .. + -++++++.+|+.+. .. .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 457899999999999999999884349999999999999999987 33 2 24689999998653 22 56
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHH--HHHHHHHHHhcccCCcEEEEEe
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+||+|++..... . . .... ..++++.+.++|+|||++++..
T Consensus 152 ~fD~Ii~d~~~~-~--------~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDP-V--------G----PAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCC-C-----------------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCC-C--------C----cchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 899999864321 1 0 1112 2678999999999999999864
No 223
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.40 E-value=6.9e-13 Score=118.96 Aligned_cols=124 Identities=12% Similarity=0.187 Sum_probs=92.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCCCceeEEEec
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEK 132 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~ 132 (259)
..++.+|||+|||+|..+..+++.+.. +++++|+++.+++.+++++...++ ++.+.++|+.+++ ++.++||+|++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccCCCCEEEEe
Confidence 457889999999999999999998754 999999999999999999998886 5788999998765 455789999975
Q ss_pred ceeeee---eeCCCCCCCCCchhH----HHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVL---FVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~---~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.+.... ...+...|...+... ....++++.+.++|||||++++.+++.
T Consensus 323 ~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 432211 111111111111111 123688999999999999999988754
No 224
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.40 E-value=6.7e-13 Score=112.61 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=84.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcC----CCCeEEEEcccCCC-cCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKG----YKEVKVLEADMLDL-PFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~-~~~~~~fD~V~ 130 (259)
+++.+|||+|||+|..+..+++..+. +++++|+++.+++.+++++...+ .++++++.+|+.+. +...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 46789999999999999999987543 99999999999999999876532 25689999998763 22257899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+..... +. ..... .++++.+.++|+|||++++...
T Consensus 157 ~d~~~~---------~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDP---------IG----PAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCT---------TT----GGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCC---------CC----cchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 854321 10 11122 6899999999999999998754
No 225
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.39 E-value=7.5e-13 Score=113.40 Aligned_cols=110 Identities=15% Similarity=0.219 Sum_probs=82.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhh--cC--CCCeEEEEcccCC-CcCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLL--KG--YKEVKVLEADMLD-LPFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~--~~--~~~v~~~~~d~~~-~~~~~~~fD~V~ 130 (259)
..+.+|||+|||+|..+..+++.... +++++|+++.+++.|++++.. .+ .++++++.+|+.+ ++...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 46689999999999999999988543 999999999999999998764 12 2469999999866 333457899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+....... + .......++++.+.++|+|||++++..
T Consensus 174 ~d~~~~~~---------~--~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMG---------P--AESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC----------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCC---------c--chhhhHHHHHHHHHhccCCCeEEEEec
Confidence 85432110 0 000123578999999999999999865
No 226
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.38 E-value=1.3e-12 Score=111.58 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=82.3
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhh----cCCCCeEEEEcccCC-CcCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLL----KGYKEVKVLEADMLD-LPFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~~~d~~~-~~~~~~~fD~V~ 130 (259)
+.+.+|||+|||+|..+..+++... .+++++|+++.+++.+++++.. ...++++++.+|+.+ ++...++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999998743 4999999999999999998753 122569999999866 333356899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHH--HHHHHHHHHHhcccCCcEEEEEecC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVT--KVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+...-... .... ...++++.+.++|+|||++++...+
T Consensus 169 ~d~~~~~~------------~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTA------------GQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCccc------------CchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 75321101 0001 1268899999999999999997543
No 227
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.38 E-value=8.5e-13 Score=108.99 Aligned_cols=149 Identities=16% Similarity=0.211 Sum_probs=107.2
Q ss_pred chHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC
Q 025039 45 YSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN 123 (259)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 123 (259)
...+...+...+.++.+|||+|||.|-++..+....+. +++++|+++.+++.+++++..++. ..++...|...-+ +.
T Consensus 119 lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D~~~~~-p~ 196 (281)
T 3lcv_B 119 LDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-PHRTNVADLLEDR-LD 196 (281)
T ss_dssp HHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECCTTTSC-CC
T ss_pred HHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeeecccC-CC
Confidence 33444444455667889999999999999999888665 999999999999999999998886 4788888887644 45
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec---CC--ccccc---cccCC--CCC
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF---GQ--PHFRR---PFFNA--PQF 193 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~--~~~~~---~~~~~--~~~ 193 (259)
+.+|++++.-+++++ ..+.....+ ++.+.|+|+|+++-..- +. +.+.. ..+.. ..-
T Consensus 197 ~~~DvaL~lkti~~L-------------e~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~ 262 (281)
T 3lcv_B 197 EPADVTLLLKTLPCL-------------ETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARER 262 (281)
T ss_dssp SCCSEEEETTCHHHH-------------HHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHh-------------hhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhc
Confidence 789999998888776 233334555 89999999999996543 11 11100 11111 113
Q ss_pred CcEEEEEEeCCeEEEE
Q 025039 194 TWSVEWITFGDGFHYF 209 (259)
Q Consensus 194 ~~~~~~~~~~~~~~~~ 209 (259)
+|......+++...|.
T Consensus 263 g~~~~~~~~~nEl~y~ 278 (281)
T 3lcv_B 263 SCRIQRLEIGNELIYV 278 (281)
T ss_dssp TCCEEEEEETTEEEEE
T ss_pred CCceeeeeecCeeEEE
Confidence 5777778888876654
No 228
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.38 E-value=7e-13 Score=114.04 Aligned_cols=108 Identities=17% Similarity=0.294 Sum_probs=80.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhc--C--CCCeEEEEcccCCC-cCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLDL-PFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~-~~~~~~fD~V~ 130 (259)
+.+.+|||+|||+|..+..+++..+. +++++|+++.+++.|++++... + -++++++.+|+.+. +...++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45689999999999999999987543 9999999999999999988653 2 24689999998762 33457899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+... +.. . ..... .++++.+.++|+|||++++..
T Consensus 187 ~d~~-~~~--------~----~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPV--------G----PAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCC--------C----cchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8643 111 0 11111 689999999999999999864
No 229
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=6e-13 Score=114.02 Aligned_cols=109 Identities=20% Similarity=0.264 Sum_probs=83.2
Q ss_pred CcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCCCceeEEEecceee
Q 025039 60 SSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKATME 136 (259)
Q Consensus 60 ~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~l~ 136 (259)
.+|||||||+|.++..+++..+. +++++|+++.+++.|++++.....++++++.+|+.+.. .++++||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 49999999999999999985444 89999999999999999986554457999999987642 3457899999753221
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.. + +.. -...++++.++++|+|||++++...+
T Consensus 171 ~~---------~-~~~-L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AI---------T-PQN-FTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SC---------C-CGG-GSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cc---------c-chh-hhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 10 0 000 01258999999999999999987654
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.37 E-value=1.4e-12 Score=110.76 Aligned_cols=78 Identities=21% Similarity=0.400 Sum_probs=67.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++...+. ++++++++|+.+.+++ +||+|+++.+
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlp 102 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLP 102 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECC
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecC
Confidence 35678999999999999999999987 999999999999999999876655 4699999999887654 7999999877
Q ss_pred ee
Q 025039 135 ME 136 (259)
Q Consensus 135 l~ 136 (259)
++
T Consensus 103 y~ 104 (285)
T 1zq9_A 103 YQ 104 (285)
T ss_dssp GG
T ss_pred cc
Confidence 64
No 231
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.36 E-value=1.3e-12 Score=112.73 Aligned_cols=110 Identities=20% Similarity=0.304 Sum_probs=83.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhc--C--CCCeEEEEcccCCC-cCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLDL-PFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~-~~~~~~fD~V~ 130 (259)
+++.+|||+|||+|..+..+++..+ .+++++|+++.+++.|++++... + .++++++++|+.+. +...++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4568999999999999999998743 39999999999999999987652 2 24699999998663 22356899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCcEEEEEecC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
++.. + ++. ..... .++++.+.++|+|||++++...+
T Consensus 195 ~d~~-~--------p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSS-D--------PIG----PAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECC-C--------SSS----GGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCc-C--------CCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 8542 1 111 11111 68999999999999999986543
No 232
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.36 E-value=4.2e-13 Score=113.71 Aligned_cols=96 Identities=9% Similarity=0.214 Sum_probs=73.0
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEE-EcccCCCc---CCCCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVL-EADMLDLP---FSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---~~~~~fD~V~~~~ 133 (259)
++.+|||+|||||.++..+++.|..+|+|+|+++.|++.+.++- +++... ..|+..+. ++..+||+|++..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchhhCCCCCCCEEEEEe
Confidence 56799999999999999999997669999999999999855431 233322 23443332 2334599999877
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
+++.+ ..+|.++.++|+|||.++++
T Consensus 160 sf~sl------------------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 160 SFISL------------------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSSCG------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred eHhhH------------------HHHHHHHHHHcCcCCEEEEE
Confidence 66433 57899999999999999987
No 233
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.35 E-value=1.7e-11 Score=100.33 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=96.3
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++.+|||+|||+|.++..+. +..+++++|+++.+++.+++++..++ .+..+...|....+.+ +++|+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSCCC-CBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCCCC-CCcchHHHHHHHH
Confidence 568899999999999999887 33399999999999999999988777 4688889998876644 5899999987777
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec---CCc--cc---cccccCC--CCCCcEEEEEEeCCeE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF---GQP--HF---RRPFFNA--PQFTWSVEWITFGDGF 206 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~--~~---~~~~~~~--~~~~~~~~~~~~~~~~ 206 (259)
++ ..+.....+ ++.+.|+++|+++-..- +.+ .+ -...+.. ..-.|......+++..
T Consensus 180 ~L-------------E~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~nEl 245 (253)
T 3frh_A 180 LL-------------EREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTEL 245 (253)
T ss_dssp HH-------------HHHSTTHHH-HHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEETTEE
T ss_pred Hh-------------hhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecCceE
Confidence 66 222233444 88889999999887641 111 11 0111111 3345777778888875
Q ss_pred EE
Q 025039 207 HY 208 (259)
Q Consensus 207 ~~ 208 (259)
.|
T Consensus 246 ~~ 247 (253)
T 3frh_A 246 IY 247 (253)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 234
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.35 E-value=6.9e-13 Score=109.60 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=76.7
Q ss_pred CCCcEEEEcCCCCcchHHHHhc----CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC---cC-CCCceeE
Q 025039 58 PNSSVLELGCGNSRLSEGLYND----GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL---PF-SNDCFDV 128 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~----~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~-~~~~fD~ 128 (259)
++.+|||+|||+|..+..+++. ++. +|+++|+++.+++.|+. . . ++++++++|+.+. +. ...+||+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~---~-~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D---M-ENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G---C-TTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c---C-CceEEEECcchhHHHHHhhccCCCCE
Confidence 4679999999999999999986 443 99999999999988872 1 1 4699999999874 43 2347999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHh-cccCCcEEEEEe
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHR-VLKPDGLFISVS 177 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~LkpgG~l~~~~ 177 (259)
|++... + .+...++.++.+ +|+|||++++.+
T Consensus 156 I~~d~~-~-----------------~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 156 IFIDNA-H-----------------ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEEESS-C-----------------SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EEECCc-h-----------------HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 997543 1 134578999997 999999999864
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.35 E-value=2.5e-12 Score=102.52 Aligned_cols=112 Identities=16% Similarity=0.261 Sum_probs=78.4
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc-CC---------CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEE-EcccCCCc---
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND-GI---------TAITCIDLSAVAVEKMQERLLLKGYKEVKVL-EADMLDLP--- 120 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~---------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~--- 120 (259)
.+.++.+|||+|||+|..+..+++. +. .+|+++|+++.+ ..+++.++ .+|+....
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHH
Confidence 3567899999999999999999987 42 489999999831 22467888 88876532
Q ss_pred -----CCCCceeEEEecceeeeeeeCCCCCCCC-CchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 121 -----FSNDCFDVVIEKATMEVLFVNSGDPWNP-QPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 121 -----~~~~~fD~V~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
+++++||+|++..+++.... |.. ..........+++++.++|+|||.+++..+....
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGF-----RDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSC-----HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCC-----cccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 23468999999765543210 000 0000111258899999999999999998776543
No 236
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.35 E-value=1.2e-12 Score=110.50 Aligned_cols=112 Identities=20% Similarity=0.257 Sum_probs=83.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhc--C--CCCeEEEEcccCC-CcCCCCceeEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLD-LPFSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~-~~~~~~~fD~V~ 130 (259)
+.+.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++... + -++++++.+|+.+ ++...++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35789999999999999999987 3349999999999999999987431 2 2469999999876 233357899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+....... . ...+ ...++++.+.++|+|||++++...+
T Consensus 154 ~d~~~~~~-~--~~~l--------~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVG-P--AVNL--------FTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCS-C--CCCC--------STTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCC-c--chhh--------hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 86432110 0 0000 1247899999999999999987543
No 237
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.34 E-value=2.1e-12 Score=112.47 Aligned_cols=119 Identities=19% Similarity=0.198 Sum_probs=88.0
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC------CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEe
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI------TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIE 131 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 131 (259)
++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...+. ++.+.++|..... ....||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~-~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL-LVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC-CCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc-ccCCccEEEE
Confidence 567999999999999998887642 3899999999999999999888776 6889999987633 3568999999
Q ss_pred cceeeeeeeCC-CCCCCCC-chhHH-HHHHHHHHHHhcccCCcEEEEEec
Q 025039 132 KATMEVLFVNS-GDPWNPQ-PETVT-KVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 132 ~~~l~~~~~~~-~~~~~~~-~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+++++++-.+. ...|.+. +.+.. ....++..+.+.|+|||+++++.+
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 99986641100 0001110 00011 123689999999999999999874
No 238
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.34 E-value=2.1e-12 Score=113.08 Aligned_cols=100 Identities=15% Similarity=0.227 Sum_probs=83.8
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
.++.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++ .+++++..+|+.+ +++ .||+|++..++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP--SADAVLLKWVL 261 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC--CCSEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC--CceEEEEcccc
Confidence 35689999999999999999998776 8999999 788876653 2469999999987 554 49999999999
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccC---CcEEEEEecC
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP---DGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 179 (259)
|++ .......+|+++.++|+| ||++++.++.
T Consensus 262 h~~-------------~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 262 HDW-------------NDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp GGS-------------CHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred cCC-------------CHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 877 345566999999999999 9999998754
No 239
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=1.1e-11 Score=105.83 Aligned_cols=78 Identities=29% Similarity=0.539 Sum_probs=64.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.+++++...+.++++++++|+.++++ .+||+|+++.++
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n~py 116 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTANIPY 116 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEECCG
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEcCCc
Confidence 35678999999999999999999876 999999999999999999877777779999999988764 379999998766
Q ss_pred e
Q 025039 136 E 136 (259)
Q Consensus 136 ~ 136 (259)
+
T Consensus 117 ~ 117 (299)
T 2h1r_A 117 K 117 (299)
T ss_dssp G
T ss_pred c
Confidence 4
No 240
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.31 E-value=3.6e-11 Score=103.08 Aligned_cols=124 Identities=15% Similarity=0.076 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC---CceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN---DCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~V~ 130 (259)
..++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.++++++..++.++.++++|+.++.... .+||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 567899999999999999999886 32 389999999999999999999999888999999988764321 4799999
Q ss_pred eccee---eeeeeCCCCCCCC--CchhH----HHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 131 EKATM---EVLFVNSGDPWNP--QPETV----TKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 131 ~~~~l---~~~~~~~~~~~~~--~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+..+. ..+...+...|.. .++.. ....++|..+.++++ ||++++.+++.
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 75432 1121112222211 11121 223567888888887 99999887763
No 241
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.30 E-value=1.8e-11 Score=109.78 Aligned_cols=100 Identities=20% Similarity=0.363 Sum_probs=80.0
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC----CcCCCCceeEEEec
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD----LPFSNDCFDVVIEK 132 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~V~~~ 132 (259)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..++++++.+.++|+.+ +++.+++||+|+++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~-~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAA-SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCC-EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 4678999999999999999999855 999999999999999999998888889999999987 23445689999987
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
.+..-. . ++++.+.+ ++|++++++.
T Consensus 364 PPr~g~---------------~---~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 364 PARAGA---------------A---GVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp CCTTCC---------------H---HHHHHHHH-HCCSEEEEEE
T ss_pred CCCccH---------------H---HHHHHHHh-cCCCeEEEEE
Confidence 654221 1 34444443 6888877764
No 242
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.29 E-value=1.3e-11 Score=110.31 Aligned_cols=100 Identities=15% Similarity=0.197 Sum_probs=80.3
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++..++++ +++.++|+.++.. . +||+|+++.+.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~-~-~fD~Vv~dPPr 363 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV-K-GFDTVIVDPPR 363 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-T-TCSEEEECCCT
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-c-CCCEEEEcCCc
Confidence 56788999999999999999999866 9999999999999999999988886 9999999988642 2 89999986553
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
... ...+++.+. .|+|+|++++..
T Consensus 364 ~g~-----------------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 364 AGL-----------------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TCS-----------------CHHHHHHHH-HHCCSEEEEEES
T ss_pred cch-----------------HHHHHHHHH-hcCCCcEEEEEC
Confidence 211 123444444 489999988863
No 243
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.28 E-value=1.4e-12 Score=109.48 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=76.1
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHh---hcCCCCeEEE--EcccCCCcCCCCceeEE
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLL---LKGYKEVKVL--EADMLDLPFSNDCFDVV 129 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~v~~~--~~d~~~~~~~~~~fD~V 129 (259)
.+.++.+|||+|||+|..+..+++. . +|+|+|+++ ++..++++.. ..+ .++.++ ++|+.+++ +++||+|
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~-~-~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR-P-HVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS-T-TEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc-C-cEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC--CCCCcEE
Confidence 4567889999999999999999988 4 899999998 4332221100 011 157888 88998865 5789999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCc--EEEEEecC
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDG--LFISVSFG 179 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG--~l~~~~~~ 179 (259)
+|..+ ++. +. ...+.. ..+|..+.++|+||| .+++..+.
T Consensus 145 ~sd~~-~~~----~~------~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 145 MCDVG-ESS----PK------WSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EECCC-CCC----SC------HHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEeCc-ccC----Cc------cchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99765 322 00 011111 238899999999999 99987776
No 244
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.27 E-value=1.7e-12 Score=109.59 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=76.3
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHh-hcCC-CCeEEE--EcccCCCcCCCCceeEEE
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLL-LKGY-KEVKVL--EADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~-~~v~~~--~~d~~~~~~~~~~fD~V~ 130 (259)
.+.++.+|||+|||+|..+..+++. . +|+|+|+++ ++..++++.. .... .++.++ ++|+.+++ +++||+|+
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~-~-~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ-P-NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS-T-TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc-C-CEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 3457889999999999999999988 4 899999998 5433322110 0011 167888 88988765 57899999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHH--HHHHHHHHhcccCCc--EEEEEecC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDG--LFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG--~l~~~~~~ 179 (259)
|..+ +.. +. ...... ..+|..+.++|+||| .+++..+.
T Consensus 154 sd~~-~~~----~~------~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIG-ESN----PT------AAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCC-CCC----SC------HHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCC-cCC----Cc------hhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9765 322 00 011111 237899999999999 99987776
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.27 E-value=4.1e-12 Score=106.56 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=78.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc----CCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK----GYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
+.+.+|||+|||+|..+..+++.+ .+++++|+++.+++.|++++... .-+++++..+|..+.. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 356899999999999999998886 69999999999999999876431 2246899999987754 689999975
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.. +...+++.+.++|+|||++++..
T Consensus 147 ~~--------------------dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 QE--------------------PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp SC--------------------CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CC--------------------ChHHHHHHHHHhcCCCcEEEEEc
Confidence 21 11238999999999999999864
No 246
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.26 E-value=6.1e-11 Score=104.74 Aligned_cols=113 Identities=13% Similarity=0.171 Sum_probs=89.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC---------------------------------------CeEEEeeCCHHHHHH
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI---------------------------------------TAITCIDLSAVAVEK 96 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~~~~ 96 (259)
..++.+|||++||+|.+++.++..+. .+|+|+|+++.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 34678999999999999999877642 269999999999999
Q ss_pred HHHHHhhcCCC-CeEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccC--CcEE
Q 025039 97 MQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP--DGLF 173 (259)
Q Consensus 97 a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp--gG~l 173 (259)
|++++...++. .+++.++|+.+++.+ .+||+|++++++..-. ........+...+.+.|++ ||.+
T Consensus 273 Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl-----------~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 273 ARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERL-----------EDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp HHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSH-----------HHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred HHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCcc-----------CCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 99999999886 499999999987654 5899999998874321 2334566777777777766 8888
Q ss_pred EEEecCC
Q 025039 174 ISVSFGQ 180 (259)
Q Consensus 174 ~~~~~~~ 180 (259)
++++...
T Consensus 341 ~iit~~~ 347 (385)
T 3ldu_A 341 YLITSYE 347 (385)
T ss_dssp EEEESCT
T ss_pred EEEECCH
Confidence 8887654
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=3.1e-11 Score=106.85 Aligned_cols=113 Identities=15% Similarity=0.168 Sum_probs=88.5
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC---------------------------------------CeEEEeeCCHHHHHH
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI---------------------------------------TAITCIDLSAVAVEK 96 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~~~~ 96 (259)
..++..|||++||+|.+++.++..+. .+|+|+|+++.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 35678999999999999998887543 159999999999999
Q ss_pred HHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccC--CcEE
Q 025039 97 MQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP--DGLF 173 (259)
Q Consensus 97 a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp--gG~l 173 (259)
|++++...++.+ +++.++|+.+++.+ .+||+|++++++..-. ........+...+.+.|++ ||.+
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl-----------~~~~~l~~ly~~lg~~lk~~~g~~~ 346 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERL-----------EDEEAVRQLYREMGIVYKRMPTWSV 346 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSH-----------HHHHHHHHHHHHHHHHHHTCTTCEE
T ss_pred HHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCcccc-----------CCchhHHHHHHHHHHHHhcCCCCEE
Confidence 999999999865 99999999987754 5899999998874321 1234555666666666655 9999
Q ss_pred EEEecCC
Q 025039 174 ISVSFGQ 180 (259)
Q Consensus 174 ~~~~~~~ 180 (259)
++++...
T Consensus 347 ~iit~~~ 353 (393)
T 3k0b_A 347 YVLTSYE 353 (393)
T ss_dssp EEEECCT
T ss_pred EEEECCH
Confidence 9887654
No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.26 E-value=4.6e-12 Score=108.52 Aligned_cols=111 Identities=15% Similarity=0.194 Sum_probs=75.9
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeC----CHHHHHHHHHHHhhcCCCCeEEEEc-ccCCCcCCCCceeEE
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDL----SAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVV 129 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~----s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~V 129 (259)
.++++.+|||+|||+|..+..+++. . +|+++|+ ++.+++.+ .....+.+++.++++ |+..++ .++||+|
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~-~-~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V 152 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL-K-NVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP--PERCDTL 152 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS-T-TEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc-C-CEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC--cCCCCEE
Confidence 4567889999999999999999988 3 7999999 55433211 111112246888888 887764 4689999
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+|..+++ . +. |. ........+|..+.++|||||.|++..+..
T Consensus 153 ~sd~~~~-~----g~-~~---~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 153 LCDIGES-S----PN-PT---VEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EECCCCC-C----SS-HH---HHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EECCccc-c----Cc-ch---hhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9976653 1 00 00 001111257899999999999999876654
No 249
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=4.6e-11 Score=105.34 Aligned_cols=113 Identities=14% Similarity=0.171 Sum_probs=89.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC---------------------------------------eEEEeeCCHHHHHH
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT---------------------------------------AITCIDLSAVAVEK 96 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------------------------------------~v~~vD~s~~~~~~ 96 (259)
..++..|||++||+|.+++.++..+.+ +++|+|+++.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 356789999999999999988875431 59999999999999
Q ss_pred HHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccC--CcEE
Q 025039 97 MQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP--DGLF 173 (259)
Q Consensus 97 a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp--gG~l 173 (259)
|++++...++.+ +++.++|+.+++.+ .+||+|++++++..-. ........+...+.+.||+ ||.+
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl-----------~~~~~l~~ly~~lg~~lk~~~g~~~ 339 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERL-----------LDDKAVDILYNEMGETFAPLKTWSQ 339 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTT-----------SCHHHHHHHHHHHHHHHTTCTTSEE
T ss_pred HHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhcc-----------CCHHHHHHHHHHHHHHHhhCCCcEE
Confidence 999999999875 99999999987754 4899999998874221 1234566666666666665 9999
Q ss_pred EEEecCC
Q 025039 174 ISVSFGQ 180 (259)
Q Consensus 174 ~~~~~~~ 180 (259)
++++...
T Consensus 340 ~iit~~~ 346 (384)
T 3ldg_A 340 FILTNDT 346 (384)
T ss_dssp EEEESCT
T ss_pred EEEECCH
Confidence 9887654
No 250
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.25 E-value=2.7e-12 Score=100.87 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=75.4
Q ss_pred ccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC---CCCceeEEE
Q 025039 54 PHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---SNDCFDVVI 130 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~V~ 130 (259)
..+.++.+|||+|||. +++|+|+.|++.|+++... ++++.++|+.++++ ++++||+|+
T Consensus 8 ~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~V~ 68 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDIIL 68 (176)
T ss_dssp TTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEEEE
T ss_pred cCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeEEE
Confidence 3477899999999986 1399999999999998642 48899999988776 678999999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+..+++++. .+...++++++++|||||++++..
T Consensus 69 ~~~~l~~~~--------------~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 69 SGLVPGSTT--------------LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp ECCSTTCCC--------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECChhhhcc--------------cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 988887651 133689999999999999999954
No 251
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.23 E-value=6.4e-12 Score=103.50 Aligned_cols=96 Identities=11% Similarity=0.195 Sum_probs=65.2
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEE-EcccCCCc---CCCCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVL-EADMLDLP---FSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---~~~~~fD~V~~~~ 133 (259)
++.+|||+|||+|.++..+++.|..+|+|+|+|+.|++.++++.. .+... ..++.... ++...+|.+.+..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~ 111 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE-----RVVVMEQFNFRNAVLADFEQGRPSFTSIDV 111 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT-----TEEEECSCCGGGCCGGGCCSCCCSEEEECC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc-----cccccccceEEEeCHhHcCcCCCCEEEEEE
Confidence 467999999999999999999976699999999999999877532 22211 11111111 1111234444332
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
++..+ ..++.++.++|||||.+++.
T Consensus 112 v~~~l------------------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 112 SFISL------------------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SSSCG------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred EhhhH------------------HHHHHHHHHhccCCCEEEEE
Confidence 22111 46899999999999999986
No 252
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.21 E-value=4.4e-11 Score=105.12 Aligned_cols=103 Identities=12% Similarity=0.183 Sum_probs=80.9
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CCC------------
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSN------------ 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~------------ 123 (259)
.+.+|||+|||+|.+++.+++.+. +|+++|+++.+++.|+++++.+++++++++++|+.+.. +..
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~~~-~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARNFD-RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGGSS-EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCCEEEEccCCCCHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 357899999999999999988654 99999999999999999999999888999999986632 111
Q ss_pred --CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 124 --DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 124 --~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
..||+|++.++... +..++.+.|+++|.++++++++..
T Consensus 292 ~~~~fD~Vv~dPPr~g---------------------~~~~~~~~l~~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 292 KSYQCETIFVDPPRSG---------------------LDSETEKMVQAYPRILYISCNPET 331 (369)
T ss_dssp GGCCEEEEEECCCTTC---------------------CCHHHHHHHTTSSEEEEEESCHHH
T ss_pred ccCCCCEEEECcCccc---------------------cHHHHHHHHhCCCEEEEEECCHHH
Confidence 37999997654321 234455666789999998877543
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.21 E-value=6.8e-11 Score=100.59 Aligned_cols=78 Identities=18% Similarity=0.302 Sum_probs=68.6
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++. +.++++++++|+.+++++...||+|+++.++
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLNKLDFNKVVANLPY 124 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGGGSCCSEEEEECCG
T ss_pred CCCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCcccCCccEEEEeCcc
Confidence 45778999999999999999999866 99999999999999999987 3357999999999988777789999988776
Q ss_pred e
Q 025039 136 E 136 (259)
Q Consensus 136 ~ 136 (259)
+
T Consensus 125 ~ 125 (295)
T 3gru_A 125 Q 125 (295)
T ss_dssp G
T ss_pred c
Confidence 4
No 254
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.17 E-value=4.5e-11 Score=105.24 Aligned_cols=100 Identities=18% Similarity=0.126 Sum_probs=81.4
Q ss_pred CCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhc---------------CCCCeEEEEcccCCCc-
Q 025039 58 PNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLK---------------GYKEVKVLEADMLDLP- 120 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---------------~~~~v~~~~~d~~~~~- 120 (259)
++.+|||+|||+|..++.++.. +..+|+++|+++.+++.++++++.+ ++.+++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999987 3338999999999999999999988 7766899999987642
Q ss_pred CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 121 FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 121 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
...+.||+|+..+.. ....+++.+.+.|+|||.+++.
T Consensus 127 ~~~~~fD~I~lDP~~-------------------~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLDPFG-------------------SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HSTTCEEEEEECCSS-------------------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCC-------------------CHHHHHHHHHHhcCCCCEEEEE
Confidence 113579999965421 1147889999999999987775
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.17 E-value=3e-12 Score=106.28 Aligned_cols=104 Identities=19% Similarity=0.283 Sum_probs=79.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-CceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~~~ 134 (259)
+.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++++. ..++++++++|+.+++++. ++| .|+++.+
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~~-~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~P 102 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKISK-QVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNKQRY-KIVGNIP 102 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHSS-EEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCSSEE-EEEEECC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-eEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccCCCc-EEEEeCC
Confidence 35678999999999999999999985 99999999999999988765 2346899999999877653 678 7777766
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHH----------H----HHHHhcccCCcEEEEEe
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAM----------L----EGVHRVLKPDGLFISVS 177 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~----------l----~~~~~~LkpgG~l~~~~ 177 (259)
++.. ......+ + +.+.++|+|||.+.+..
T Consensus 103 y~~~--------------~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 103 YHLS--------------TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSSC--------------HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccc--------------HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 5421 1122222 2 66889999999987653
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.16 E-value=2.9e-11 Score=108.85 Aligned_cols=118 Identities=19% Similarity=0.203 Sum_probs=88.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcC--------------CCeEEEeeCCHHHHHHHHHHHhhcCCC--CeEEEEcccCCCc
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDG--------------ITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDLP 120 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~ 120 (259)
.++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.|+.++..+++. ++.+.++|....+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 356799999999999998887641 127999999999999999998888875 5788999987765
Q ss_pred CCCCceeEEEecceeeeeeeCCCC-----CCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 121 FSNDCFDVVIEKATMEVLFVNSGD-----PWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 121 ~~~~~fD~V~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.. .+||+|++++++......... .+.+ .......+++.+.++|+|||++.++.+
T Consensus 250 ~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~---~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 250 PS-TLVDVILANPPFGTRPAGSVDINRPDFYVE---TKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSC---CSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc-CCcCEEEECCCCCCcccccchhhHhhcCCC---CcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 33 489999999988653211000 0001 111235789999999999999998874
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.15 E-value=5.5e-11 Score=105.98 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=79.2
Q ss_pred CCCcEEEEcCCCCcchHHHHhcC--CCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDG--ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.| .++.+.++|+.+.. ..++||+|++++++
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWE-PGEAFDLILGNPPY 108 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCC-CSSCEEEEEECCCC
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcC-ccCCCCEEEECcCc
Confidence 46799999999999999998752 23999999999988766 36889999998765 34689999999887
Q ss_pred eeeeeCCCCCCCC-CchhHH---------------HHHHHHHHHHhcccCCcEEEEEecC
Q 025039 136 EVLFVNSGDPWNP-QPETVT---------------KVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 136 ~~~~~~~~~~~~~-~~~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
....... .+.. ...... ....+++.+.++|+|||.++++.+.
T Consensus 109 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 109 GIVGEAS--KYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCBSCTT--TCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCccccc--ccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 5431100 0000 000111 1236799999999999999998754
No 258
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=6.2e-11 Score=104.54 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=82.1
Q ss_pred CCCcEEEEcCCCCcchHHHHhc--CCCeEEEeeCCHHHHHHHHHHHhhcCCCC--eEEEEcccCCCc--CCCCceeEEEe
Q 025039 58 PNSSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLDLP--FSNDCFDVVIE 131 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~~--~~~~~fD~V~~ 131 (259)
++.+|||++||+|..++.++.. |..+|+++|+++.+++.++++++.+++.+ ++++++|+.++. ...+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5789999999999999999985 33489999999999999999999999876 899999986632 12357999997
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.+ +. ....+++.+.++|+|||++++..
T Consensus 132 DP-~g------------------~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-FG------------------TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-SS------------------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-Cc------------------CHHHHHHHHHHHhCCCCEEEEEe
Confidence 65 21 11358889999999999887754
No 259
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.14 E-value=1e-10 Score=103.54 Aligned_cols=155 Identities=11% Similarity=0.029 Sum_probs=97.0
Q ss_pred cccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc--CCCCeEEEEcccCCC-cC-CCCceeE
Q 025039 53 QPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK--GYKEVKVLEADMLDL-PF-SNDCFDV 128 (259)
Q Consensus 53 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~v~~~~~d~~~~-~~-~~~~fD~ 128 (259)
...+.++.+|||+|||+|..+..+++.+. +|+++|+|+.+++.|++++... ++.+++++++|+.+. +. ++++||+
T Consensus 88 a~~l~~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDv 166 (410)
T 3ll7_A 88 SRFIREGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDY 166 (410)
T ss_dssp GGGSCTTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSE
T ss_pred HHhcCCCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceE
Confidence 34455589999999999999999998876 9999999999999999999887 776799999999874 31 2358999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCCCCcEEEEEEeCCeEEE
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHY 208 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
|+++++...- ..+.-|. .++...-+..+.+.|...+..+++-.++..-....+..........|...+++...
T Consensus 167 V~lDPPrr~~--~~grv~~-----led~~P~l~~~~~~l~~~~~~~~vK~sP~ld~~~~~~~l~~~~ev~~vSv~ge~kE 239 (410)
T 3ll7_A 167 IYVDPARRSG--ADKRVYA-----IADCEPDLIPLATELLPFCSSILAKLSPMIDLWDTLQSLLHVQELHVVAAHGEVKE 239 (410)
T ss_dssp EEECCEEC-------CCCC-----GGGEESCHHHHHHHHGGGSSEEEEEECTTSCHHHHHHHCSSEEEEEEEEETTEEEE
T ss_pred EEECCCCcCC--CCceEEe-----hhhcCCCHHHHHHHHHhhCCcEEEEcCCCCChHHHHhhCCCCcEEEEEEeCCeEEE
Confidence 9998776421 0011111 11111123334443333223333333332211111111124567788888888766
Q ss_pred EEEEEEe
Q 025039 209 FFYILRK 215 (259)
Q Consensus 209 ~~~~~~~ 215 (259)
...++..
T Consensus 240 ~~l~~~~ 246 (410)
T 3ll7_A 240 LLVRMSL 246 (410)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 5555543
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.12 E-value=1.3e-10 Score=100.73 Aligned_cols=116 Identities=20% Similarity=0.238 Sum_probs=82.5
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC---C-----CCeEEEEcccCCCcC----CCC
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG---Y-----KEVKVLEADMLDLPF----SND 124 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~-----~~v~~~~~d~~~~~~----~~~ 124 (259)
+.+.+||++|||+|..+..+++.+..+|+++|+++.+++.|++++...+ + ++++++.+|+.+... ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3578999999999999999998876689999999999999999976432 1 158999999877431 356
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCc---hhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQP---ETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
+||+|++..+- .|..+.| ...+-...+++.+.++|+|||++++...+.
T Consensus 267 ~fDvII~D~~d--------~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTA--------VPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCS--------SCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceEEEECCCC--------cccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 89999975421 0111111 122333444455599999999999875543
No 261
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.11 E-value=2e-10 Score=100.13 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=91.4
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCC------CCeEEEEcccCCCc-CCCCce
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY------KEVKVLEADMLDLP-FSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~-~~~~~f 126 (259)
...++.+|||+|||+|.-+.++++.+.. .++++|+++..++.+++++...+. .++.+...|...++ ...+.|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 4568999999999999999999998765 899999999999999999887654 35778888877654 345689
Q ss_pred eEEEeccee-e----eeeeCCCCCCCCCchhH----HHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 127 DVVIEKATM-E----VLFVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 127 D~V~~~~~l-~----~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
|.|++..+= . ..-.++...|...+... ....++|..+.++|||||+|+.++++.
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 999954321 1 11111222232222222 223578999999999999999998874
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=9.4e-10 Score=91.68 Aligned_cols=76 Identities=17% Similarity=0.324 Sum_probs=64.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCC----CCceeEEEe
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS----NDCFDVVIE 131 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~fD~V~~ 131 (259)
+.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++.. .++++++++|+.+++++ .+.|| |++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~ 102 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVKTDKPLR-VVG 102 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSCCSSCEE-EEE
T ss_pred CCCcCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhccCCCeE-EEe
Confidence 45678999999999999999999985 999999999999999999865 35799999999987653 24688 677
Q ss_pred ccee
Q 025039 132 KATM 135 (259)
Q Consensus 132 ~~~l 135 (259)
+.++
T Consensus 103 NlPY 106 (255)
T 3tqs_A 103 NLPY 106 (255)
T ss_dssp ECCH
T ss_pred cCCc
Confidence 7665
No 263
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.08 E-value=1.3e-09 Score=90.32 Aligned_cols=75 Identities=16% Similarity=0.386 Sum_probs=62.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-CceeEEEeccee
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKATM 135 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~~~l 135 (259)
.++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++... ++++++++|+.++++++ ..| .|+++.++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~--~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCKTTENKLVDH--DNFQVLNKDILQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHTTTC--CSEEEECCCGGGCCCCSSCCC-EEEEECCG
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHHHHHHhhccC--CCeEEEEChHHhCCcccCCCe-EEEEeCCc
Confidence 4678999999999999999999985 9999999999999999987642 47999999999887653 345 56666555
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.08 E-value=1.1e-09 Score=103.71 Aligned_cols=116 Identities=13% Similarity=0.128 Sum_probs=86.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcC------------------------------------------C-CeEEEeeCCHHH
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDG------------------------------------------I-TAITCIDLSAVA 93 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~------------------------------------------~-~~v~~vD~s~~~ 93 (259)
.++..|||++||+|.+++.++..+ . .+++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 467899999999999999887652 1 279999999999
Q ss_pred HHHHHHHHhhcCCCC-eEEEEcccCCCcCC--CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC
Q 025039 94 VEKMQERLLLKGYKE-VKVLEADMLDLPFS--NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD 170 (259)
Q Consensus 94 ~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~--~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 170 (259)
++.|++++...|+.+ +++.++|+.++..+ .++||+|++++++..-..+ ........+.+.++.+.+.||
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~--------~~~l~~ly~~l~~~lk~~~~g 340 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDS--------EPALIALHSLLGRIMKNQFGG 340 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---C--------CHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccc--------hhHHHHHHHHHHHHHHhhCCC
Confidence 999999999999876 89999999886422 3389999999987532110 012233344455555666689
Q ss_pred cEEEEEecCC
Q 025039 171 GLFISVSFGQ 180 (259)
Q Consensus 171 G~l~~~~~~~ 180 (259)
|.+++++...
T Consensus 341 ~~~~ilt~~~ 350 (703)
T 3v97_A 341 WNLSLFSASP 350 (703)
T ss_dssp CEEEEEESCH
T ss_pred CeEEEEeCCH
Confidence 9999987654
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.08 E-value=8e-10 Score=92.85 Aligned_cols=77 Identities=19% Similarity=0.256 Sum_probs=66.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-CceeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~~~ 134 (259)
+.++ +|||+|||+|.++..+++.+. +|+++|+++.+++.+++++.. .+++++++|+.++++++ ..+|.|+++.+
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWEEVPQGSLLVANLP 119 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGGGSCTTEEEEEEEC
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChhhccCccEEEecCc
Confidence 4567 999999999999999999986 899999999999999998762 47999999999877653 26899999877
Q ss_pred eee
Q 025039 135 MEV 137 (259)
Q Consensus 135 l~~ 137 (259)
++.
T Consensus 120 y~i 122 (271)
T 3fut_A 120 YHI 122 (271)
T ss_dssp SSC
T ss_pred ccc
Confidence 654
No 266
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.08 E-value=2.4e-10 Score=96.90 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=72.0
Q ss_pred cCCCCCcEEEEcCCC------CcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEE-EEcccCCCcCCCCc
Q 025039 55 HIKPNSSVLELGCGN------SRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKV-LEADMLDLPFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~------G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~-~~~d~~~~~~~~~~ 125 (259)
.++++.+|||+|||+ |. ..+++. +.. +|+|+|+++. ++++++ +++|+.+++++ ++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~-~~ 123 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTA-NK 123 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCS-SC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCcc-Cc
Confidence 456789999999955 55 434444 322 8999999987 135788 99999887654 68
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
||+|+++...+.. +..-............+++.+.++|||||.|++..+..
T Consensus 124 fD~Vvsn~~~~~~----g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 124 WDLIISDMYDPRT----KHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp EEEEEECCCCCC-------CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ccEEEEcCCcccc----ccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 9999987532211 00000011122345689999999999999999976654
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.00 E-value=9.4e-11 Score=97.99 Aligned_cols=80 Identities=13% Similarity=0.109 Sum_probs=66.2
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCH-------HHHHHHHHHHhhcCCCC-eEEEEcccCCC-c-CCC--C
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSA-------VAVEKMQERLLLKGYKE-VKVLEADMLDL-P-FSN--D 124 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~-------~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~-~~~--~ 124 (259)
.++.+|||+|||+|..++.+++.+. +|+++|+++ .+++.+++++..+++.+ ++++++|+.++ + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3568999999999999999999876 899999999 99999999887776655 99999998774 2 333 6
Q ss_pred ceeEEEecceeee
Q 025039 125 CFDVVIEKATMEV 137 (259)
Q Consensus 125 ~fD~V~~~~~l~~ 137 (259)
+||+|++++++.+
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 8999999877654
No 268
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.99 E-value=2.7e-09 Score=85.45 Aligned_cols=109 Identities=12% Similarity=0.022 Sum_probs=79.6
Q ss_pred HHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC---CCeEEEEcccCCC----
Q 025039 47 HFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY---KEVKVLEADMLDL---- 119 (259)
Q Consensus 47 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~---- 119 (259)
....++...+.+..+|||+|| |..++++++....+|+.+|.+++..+.|+++++..++ .+++++.+|+.+.
T Consensus 19 ~~~~~L~~~l~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg 96 (202)
T 3cvo_A 19 AEAEALRMAYEEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWG 96 (202)
T ss_dssp HHHHHHHHHHHHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGG
T ss_pred HHHHHHHHHhhCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhccc
Confidence 334444444556789999998 4688888875223999999999999999999998885 3599999986542
Q ss_pred -----------c--------C-CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 120 -----------P--------F-SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 120 -----------~--------~-~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+ . ..++||+|+..+-. ....+..+.++|+|||++++-.
T Consensus 97 ~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k--------------------~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 97 HPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF--------------------RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp CBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS--------------------HHHHHHHHHHHCSSCEEEEETT
T ss_pred ccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC--------------------chhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 23679999965421 1356666789999999997643
No 269
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.97 E-value=3.5e-09 Score=97.22 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=88.5
Q ss_pred CCCcEEEEcCCCCcchHHHHhcC----CCeEEEeeCCHHHHHHHHHHHhhcCC--CCeEEEEcccCCC--c-CCCCceeE
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDG----ITAITCIDLSAVAVEKMQERLLLKGY--KEVKVLEADMLDL--P-FSNDCFDV 128 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~--~-~~~~~fD~ 128 (259)
++.+|||+|||+|.++..+++.. ...++|+|+++.++..|+.++..+++ +++.+.++|.... + .....||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 56799999999999998887762 22899999999999999999988887 4578999998765 3 34578999
Q ss_pred EEecceeeeeeeCC-----CCCCCC---CchhHHHHHHHHHHHHhccc-CCcEEEEEecC
Q 025039 129 VIEKATMEVLFVNS-----GDPWNP---QPETVTKVMAMLEGVHRVLK-PDGLFISVSFG 179 (259)
Q Consensus 129 V~~~~~l~~~~~~~-----~~~~~~---~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 179 (259)
|++++++..-.... ...|.+ .+........++..+.+.|+ |||++.++.+.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 99999985321000 000100 00001111258999999999 99999988754
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.96 E-value=1e-09 Score=100.97 Aligned_cols=121 Identities=12% Similarity=0.034 Sum_probs=86.9
Q ss_pred CCCCcEEEEcCCCCcchHHHHhc----C---------------CCeEEEeeCCHHHHHHHHHHHhhcCCCC-----eEEE
Q 025039 57 KPNSSVLELGCGNSRLSEGLYND----G---------------ITAITCIDLSAVAVEKMQERLLLKGYKE-----VKVL 112 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~----~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~-----v~~~ 112 (259)
.++.+|||+|||+|.++..+++. + ...++|+|+++.+++.|+.++..+++.. +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 35679999999999998887654 1 1279999999999999999988888765 7888
Q ss_pred EcccCCCc-CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 113 EADMLDLP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 113 ~~d~~~~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++|....+ .....||+|++++++....... ..+............++..+.+.|+|||++.++.+
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~-~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTN-ITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCC-CCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchh-hHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 99887643 3346899999999885431100 00000000011234789999999999999998865
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.91 E-value=1.5e-09 Score=92.50 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=64.7
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CC---CCceeEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FS---NDCFDVV 129 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~---~~~fD~V 129 (259)
+.++.+|||+|||+|..+..+++..+. +|+|+|+|+.+++.|++++...+ .+++++++|+.+++ +. ..+||.|
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 357789999999999999999998533 99999999999999999998877 67999999988764 11 1579999
Q ss_pred Eecc
Q 025039 130 IEKA 133 (259)
Q Consensus 130 ~~~~ 133 (259)
++..
T Consensus 103 l~D~ 106 (301)
T 1m6y_A 103 LMDL 106 (301)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8753
No 272
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.89 E-value=1.6e-08 Score=85.33 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=61.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCe----EEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCC------c
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITA----ITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSND------C 125 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~----v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------~ 125 (259)
+.++.+|||+|||+|.++..+++.+. . |+++|+++.+++.++++. .++++++++|+.++++++- .
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~~~~~~~~~~ 114 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFGSIARPGDEP 114 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGGGGSCSSSSC
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChhHhcccccCC
Confidence 45788999999999999999999876 5 999999999999999984 2479999999998765421 2
Q ss_pred eeEEEeccee
Q 025039 126 FDVVIEKATM 135 (259)
Q Consensus 126 fD~V~~~~~l 135 (259)
.+.|+++.++
T Consensus 115 ~~~vv~NlPY 124 (279)
T 3uzu_A 115 SLRIIGNLPY 124 (279)
T ss_dssp CEEEEEECCH
T ss_pred ceEEEEccCc
Confidence 3467776655
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.86 E-value=3.1e-09 Score=97.67 Aligned_cols=134 Identities=11% Similarity=0.067 Sum_probs=87.8
Q ss_pred hHHHHhhcccCC-CCCcEEEEcCCCCcchHHHHhcC----------------CCeEEEeeCCHHHHHHHHHHHhhcCCCC
Q 025039 46 SHFRHLVQPHIK-PNSSVLELGCGNSRLSEGLYNDG----------------ITAITCIDLSAVAVEKMQERLLLKGYKE 108 (259)
Q Consensus 46 ~~~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~~----------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 108 (259)
+.+..++...+. ...+|||+|||+|.+++.+++.. ...++|+|+++.++..|+.++..+++..
T Consensus 231 ~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 310 (544)
T 3khk_A 231 KSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDF 310 (544)
T ss_dssp HHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 444444443332 23499999999999888775421 1279999999999999999998887643
Q ss_pred -eEEEEcccCCCc-CCCCceeEEEecceeeeee-eC----CCCCCCC---------CchhHHHHHHHHHHHHhcccCCcE
Q 025039 109 -VKVLEADMLDLP-FSNDCFDVVIEKATMEVLF-VN----SGDPWNP---------QPETVTKVMAMLEGVHRVLKPDGL 172 (259)
Q Consensus 109 -v~~~~~d~~~~~-~~~~~fD~V~~~~~l~~~~-~~----~~~~~~~---------~~~~~~~~~~~l~~~~~~LkpgG~ 172 (259)
+.+.++|....+ .....||+|++++++..-- .. ....|.. .+........+++.+.+.|+|||+
T Consensus 311 ~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 311 NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp BCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred ccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 334677766543 3457899999999986310 00 0000000 000111123689999999999999
Q ss_pred EEEEecC
Q 025039 173 FISVSFG 179 (259)
Q Consensus 173 l~~~~~~ 179 (259)
+.++.+.
T Consensus 391 ~aiVlP~ 397 (544)
T 3khk_A 391 MALLLAN 397 (544)
T ss_dssp EEEEEET
T ss_pred EEEEecc
Confidence 9988653
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.85 E-value=9.8e-09 Score=85.25 Aligned_cols=76 Identities=21% Similarity=0.321 Sum_probs=60.4
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCc-eeEEEecce
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDC-FDVVIEKAT 134 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~V~~~~~ 134 (259)
..++.+|||+|||+|.++..+++.+..+|+++|+++.+++.++++ . ..+++++++|+.++++++.. ...|+++.+
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---~~~v~~i~~D~~~~~~~~~~~~~~vv~NlP 104 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---DERLEVINEDASKFPFCSLGKELKVVGNLP 104 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---CTTEEEECSCTTTCCGGGSCSSEEEEEECC
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---CCCeEEEEcchhhCChhHccCCcEEEEECc
Confidence 346789999999999999999999644999999999999999887 2 24799999999987754321 236666655
Q ss_pred e
Q 025039 135 M 135 (259)
Q Consensus 135 l 135 (259)
+
T Consensus 105 y 105 (249)
T 3ftd_A 105 Y 105 (249)
T ss_dssp T
T ss_pred h
Confidence 5
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=3.6e-09 Score=98.21 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=75.4
Q ss_pred CCcEEEEcCCCCcchHHHHhc---CCC--eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCCCCceeEEEec
Q 025039 59 NSSVLELGCGNSRLSEGLYND---GIT--AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~---~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
...|||+|||+|-+....+++ +.. +|++||.|+ +...+++..+.+++.+ |+++++|+.++..+ +++|+|++-
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 357999999999985554443 332 789999997 5667888888888876 99999999998765 689999975
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEE
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 174 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 174 (259)
.+=..++ . +...+++....+.|||||+++
T Consensus 436 wMG~fLl------------~-E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFAD------------N-ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBG------------G-GCHHHHHHHHGGGEEEEEEEE
T ss_pred cCccccc------------c-cCCHHHHHHHHHhcCCCcEEc
Confidence 3211111 1 122367888889999999987
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.81 E-value=3.9e-08 Score=83.08 Aligned_cols=111 Identities=23% Similarity=0.351 Sum_probs=82.3
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhc-----CCCCeEEEEcccCCC-cCCCCceeE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK-----GYKEVKVLEADMLDL-PFSNDCFDV 128 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~v~~~~~d~~~~-~~~~~~fD~ 128 (259)
.+.+.+||-+|.|.|..+..+++... .+++.+|+++.+++.+++.+... .-++++++.+|.... ....++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 35678999999999999999998743 39999999999999999876432 225699999999874 334578999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
|+.... +-.. +...+ --.++++.++++|+|||+++.-.
T Consensus 161 Ii~D~~-dp~~--~~~~L--------~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 161 IISDCT-DPIG--PGESL--------FTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEESCC-CCCC--TTCCS--------SCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCC-CcCC--Cchhh--------cCHHHHHHHHHHhCCCCEEEEec
Confidence 996432 1000 00000 11478999999999999999853
No 277
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.80 E-value=2.5e-08 Score=94.07 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=80.4
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCC----CeEEEeeCCHHHHHHH--HHHHhh----cCCCCeEEEEcccCCCc-CCCCc
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGI----TAITCIDLSAVAVEKM--QERLLL----KGYKEVKVLEADMLDLP-FSNDC 125 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~v~~vD~s~~~~~~a--~~~~~~----~~~~~v~~~~~d~~~~~-~~~~~ 125 (259)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.| +.++.. .+.....+...|+.... .....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4578999999999999999987642 2799999999999999 554433 23333455555665532 23468
Q ss_pred eeEEEecceeeeeeeCCCC------------CCCC--CchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGD------------PWNP--QPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~------------~~~~--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
||+|++++++......... +..+ ..........+++.+.++|+|||++.++.+.
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 9999999988321000000 0000 0000012345788899999999999998764
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.76 E-value=3.5e-09 Score=98.38 Aligned_cols=102 Identities=19% Similarity=0.281 Sum_probs=73.7
Q ss_pred CCcEEEEcCCCCcchHHHHh----cC---------CC-eEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCCCcCC-
Q 025039 59 NSSVLELGCGNSRLSEGLYN----DG---------IT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFS- 122 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~----~~---------~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~- 122 (259)
+..|||+|||+|-++...+. .+ .. +|++||.++.++..++.+.. +++.+ |+++.+|+.++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 46899999999999753322 22 22 89999999988766665543 67665 99999999987652
Q ss_pred ----CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEE
Q 025039 123 ----NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 174 (259)
Q Consensus 123 ----~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 174 (259)
.+++|+|++-.. ..+. ..+...+.|..+.+.|||||+++
T Consensus 489 ~~~~~ekVDIIVSElm-Gsfl------------~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL-GSFG------------DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCC-BTTB------------GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecc-cccc------------chhccHHHHHHHHHhCCCCcEEE
Confidence 478999998533 1110 11334568888889999999887
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.75 E-value=8.9e-09 Score=85.63 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=59.8
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCe--EEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC-----CceeE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITA--ITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-----DCFDV 128 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~fD~ 128 (259)
+.++.+|||+|||+|.++. +.. +. + |+++|+++.+++.+++++... ++++++++|+.++++++ +..|.
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~~~~~~~~ 93 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAEKMGQPLR 93 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHHHHTSCEE
T ss_pred CCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhcccCCceE
Confidence 4567899999999999999 654 54 6 999999999999999887543 47999999998876432 23478
Q ss_pred EEeccee
Q 025039 129 VIEKATM 135 (259)
Q Consensus 129 V~~~~~l 135 (259)
|+++.++
T Consensus 94 vvsNlPY 100 (252)
T 1qyr_A 94 VFGNLPY 100 (252)
T ss_dssp EEEECCT
T ss_pred EEECCCC
Confidence 8887665
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.68 E-value=6.7e-08 Score=72.56 Aligned_cols=99 Identities=11% Similarity=0.162 Sum_probs=69.0
Q ss_pred hHHHHhhcccCCCCCcEEEEcCCCC-cchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCC
Q 025039 46 SHFRHLVQPHIKPNSSVLELGCGNS-RLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN 123 (259)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLDiGcG~G-~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 123 (259)
..+...+.....++.+|||+|||.| ..+..|++ .|. .|+++|+++.+++ +++.|+++.....
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~---------------~v~dDiF~P~~~~ 86 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG---------------IVRDDITSPRMEI 86 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT---------------EECCCSSSCCHHH
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc---------------eEEccCCCCcccc
Confidence 4566666666667789999999999 59999997 888 8999999986443 7888888744321
Q ss_pred -CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 124 -DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 124 -~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
..||+|++..+ ..+++..+-++++.+ |.-+++..++.
T Consensus 87 Y~~~DLIYsirP------------------P~El~~~i~~lA~~v--~adliI~pL~~ 124 (153)
T 2k4m_A 87 YRGAALIYSIRP------------------PAEIHSSLMRVADAV--GARLIIKPLTG 124 (153)
T ss_dssp HTTEEEEEEESC------------------CTTTHHHHHHHHHHH--TCEEEEECBTT
T ss_pred cCCcCEEEEcCC------------------CHHHHHHHHHHHHHc--CCCEEEEcCCC
Confidence 37999987432 234444444455433 56777766554
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.67 E-value=1.7e-08 Score=84.10 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=60.4
Q ss_pred CCC--CcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh-------cC-C-CCeEEEEcccCCC-cCCCC
Q 025039 57 KPN--SSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-------KG-Y-KEVKVLEADMLDL-PFSND 124 (259)
Q Consensus 57 ~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~-~-~~v~~~~~d~~~~-~~~~~ 124 (259)
.++ .+|||+|||+|..+..+++.|. +|+++|.++.+.+.++++++. ++ + .+++++++|..++ +....
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~ 163 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITP 163 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcc
Confidence 456 8999999999999999999987 899999999876666655432 22 3 3589999998763 31124
Q ss_pred ceeEEEecceee
Q 025039 125 CFDVVIEKATME 136 (259)
Q Consensus 125 ~fD~V~~~~~l~ 136 (259)
.||+|++.+++.
T Consensus 164 ~fDvV~lDP~y~ 175 (258)
T 2oyr_A 164 RPQVVYLDPMFP 175 (258)
T ss_dssp CCSEEEECCCCC
T ss_pred cCCEEEEcCCCC
Confidence 799999887764
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.59 E-value=5.9e-08 Score=80.61 Aligned_cols=121 Identities=13% Similarity=0.156 Sum_probs=74.9
Q ss_pred HHHhhc-ccCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCc
Q 025039 48 FRHLVQ-PHIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDC 125 (259)
Q Consensus 48 ~~~~l~-~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 125 (259)
+.++.. ..+.++.+|||+|||+|..+..+++. +...++++|+...+...... ....+. ++.....++....++.+.
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~~l~~~~ 140 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIHRLEPVK 140 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceehhcCCCC
Confidence 334333 34567889999999999999988876 33378888887432100000 000111 444455655444556778
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 179 (259)
||+|+|....+ . +.+|. +......+|+.+.++|+|| |.|++-.|.
T Consensus 141 ~DlVlsD~apn-s----G~~~~----D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 141 CDTLLCDIGES-S----SSSVT----EGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSEEEECCCCC-C----SCHHH----HHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccEEEecCccC-c----CchHH----HHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99999976544 2 21110 1112224578889999999 999997776
No 283
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.45 E-value=3.7e-07 Score=79.83 Aligned_cols=124 Identities=14% Similarity=0.175 Sum_probs=78.6
Q ss_pred CCcEEEEcCCCCcchHHHHh--------c----C---CC-eEEEeeCCHHHHHHHHHHHhhcC-------------CCC-
Q 025039 59 NSSVLELGCGNSRLSEGLYN--------D----G---IT-AITCIDLSAVAVEKMQERLLLKG-------------YKE- 108 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~--------~----~---~~-~v~~vD~s~~~~~~a~~~~~~~~-------------~~~- 108 (259)
+.+|+|+|||+|..+..+.. . + +. +|+..|+-.......-+.+.... .+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999998887732 1 1 33 78888877666555444433210 011
Q ss_pred -eEEEEcccCCCcCCCCceeEEEecceeeeeeeCC-------CCCCCCC--------ch--------hHHHHHHHHHHHH
Q 025039 109 -VKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNS-------GDPWNPQ--------PE--------TVTKVMAMLEGVH 164 (259)
Q Consensus 109 -v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~-------~~~~~~~--------~~--------~~~~~~~~l~~~~ 164 (259)
+..+.+.+..-.++++++|+|+++.++|.+-..+ +..|+.. |. -..+...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333455555457889999999999998763111 0111110 00 0125667899999
Q ss_pred hcccCCcEEEEEecCCcc
Q 025039 165 RVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 165 ~~LkpgG~l~~~~~~~~~ 182 (259)
+.|+|||++++...+.+.
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHEEEEEEEEEEEEECCC
T ss_pred HHhCCCCEEEEEEecCCC
Confidence 999999999998776543
No 284
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.41 E-value=1.1e-06 Score=76.96 Aligned_cols=122 Identities=12% Similarity=0.059 Sum_probs=78.2
Q ss_pred CCcEEEEcCCCCcchHHHHhc-----------------CCC-eEEEeeCC-----------HHHHHHHHHHHhhcCCCCe
Q 025039 59 NSSVLELGCGNSRLSEGLYND-----------------GIT-AITCIDLS-----------AVAVEKMQERLLLKGYKEV 109 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~-~v~~vD~s-----------~~~~~~a~~~~~~~~~~~v 109 (259)
..+|+|+||++|..+..+... .+. +|+..|+- +.+.+.+++... ... +.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g-~~~-~~ 130 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG-RKI-GS 130 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC-CCT-TS
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc-CCC-Cc
Confidence 578999999999988877664 133 78888977 555544433211 011 22
Q ss_pred EEE---EcccCCCcCCCCceeEEEecceeeeeeeCCC-------CCCCCC--------chh---------HHHHHHHHHH
Q 025039 110 KVL---EADMLDLPFSNDCFDVVIEKATMEVLFVNSG-------DPWNPQ--------PET---------VTKVMAMLEG 162 (259)
Q Consensus 110 ~~~---~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~-------~~~~~~--------~~~---------~~~~~~~l~~ 162 (259)
.+. .+.+..-.++++++|+|+++.++|.+-..+. .+|+.. |.. ..|...+|+.
T Consensus 131 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 131 CLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 333 3444455578899999999999987632211 112221 111 1244556888
Q ss_pred HHhcccCCcEEEEEecCCcc
Q 025039 163 VHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 163 ~~~~LkpgG~l~~~~~~~~~ 182 (259)
.++.|+|||++++...+.+.
T Consensus 211 Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 211 HSEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHHEEEEEEEEEEEECCCT
T ss_pred HHHHhccCCeEEEEEecCCC
Confidence 99999999999999887654
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.41 E-value=1.1e-07 Score=79.08 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=70.6
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
.+.++.+|||+|||+|..+..+++. +...++|+|+...+...+.. ....+ .++.....++....++...+|+|+|..
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g-~~ii~~~~~~dv~~l~~~~~DvVLSDm 164 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLG-WNLIRFKDKTDVFNMEVIPGDTLLCDI 164 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCC-CceEEeeCCcchhhcCCCCcCEEEecC
Confidence 4567889999999999999988865 43389999998653221111 00112 133333333222234567899999976
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC--cEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD--GLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~~ 179 (259)
..+ . +.++. +......+|+-+.++|+|| |.|++-.|.
T Consensus 165 Apn-s----G~~~~----D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 165 GES-S----PSIAV----EEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCC-C----SCHHH----HHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ccC-C----CChHH----HHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 654 2 11110 1112224688888999999 999998777
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.40 E-value=1.1e-06 Score=73.87 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=79.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhc----C-CC-eEEEeeCCHH--------------------------HHHHHHHHHhhc
Q 025039 57 KPNSSVLELGCGNSRLSEGLYND----G-IT-AITCIDLSAV--------------------------AVEKMQERLLLK 104 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~----~-~~-~v~~vD~s~~--------------------------~~~~a~~~~~~~ 104 (259)
..+..|||+|+..|..++.++.. + .. +++++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34679999999999999887654 2 13 8999996421 467789999988
Q ss_pred CC--CCeEEEEcccCC-Cc-CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 105 GY--KEVKVLEADMLD-LP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 105 ~~--~~v~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++ ++++++.+++.+ ++ .+.++||+|+...- ..+.....++.+...|+|||++++-++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD-----------------~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD-----------------LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC-----------------SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC-----------------ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 87 469999999865 33 33568999985432 113456889999999999999998665
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.39 E-value=9.5e-07 Score=76.93 Aligned_cols=115 Identities=20% Similarity=0.227 Sum_probs=78.7
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC--------CCCeEEEEcccCCCc----CCCC
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG--------YKEVKVLEADMLDLP----FSND 124 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--------~~~v~~~~~d~~~~~----~~~~ 124 (259)
.++.+||-+|.|.|..+.++++....+++.+|+++.+++.+++.+.... .++++++.+|....- ...+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3568999999999999999998765699999999999999999764321 124788888886532 1345
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
.||+|+....-... ...+. .+....-.+++++.++++|+|||+++.-
T Consensus 284 ~yDvIIvDl~D~~~---s~~p~--g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 284 EFDYVINDLTAVPI---STSPE--EDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CEEEEEEECCSSCC---CCC------CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeEEEECCCCCcc---cCccc--CcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 79999964210000 00000 0011122367899999999999999874
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.39 E-value=2.8e-07 Score=76.77 Aligned_cols=105 Identities=12% Similarity=0.154 Sum_probs=68.4
Q ss_pred CCCcEEEEcCCCCcchHHHHhc-------CC-----C-eEEEeeCCH---HHHH-----------HHHHHHhhc------
Q 025039 58 PNSSVLELGCGNSRLSEGLYND-------GI-----T-AITCIDLSA---VAVE-----------KMQERLLLK------ 104 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~-------~~-----~-~v~~vD~s~---~~~~-----------~a~~~~~~~------ 104 (259)
++.+|||+|+|+|..+..+++. ++ . +++++|..+ +.+. .+++.+...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5579999999999988876553 33 2 799999876 4444 445554431
Q ss_pred --------CCCCeEEEEcccCC-CcC-CC---CceeEEEecceeeeeeeCCCCCCCCCchhHHH-HHHHHHHHHhcccCC
Q 025039 105 --------GYKEVKVLEADMLD-LPF-SN---DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-VMAMLEGVHRVLKPD 170 (259)
Q Consensus 105 --------~~~~v~~~~~d~~~-~~~-~~---~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~Lkpg 170 (259)
+..++++..+|+.+ ++. +. ..||+|+..+ + .|.. +.+. ..++++.+.++|+||
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~----f--------sp~~-~p~lw~~~~l~~l~~~L~pG 206 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG----F--------APAK-NPDMWTQNLFNAMARLARPG 206 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS----S--------CTTT-CGGGCCHHHHHHHHHHEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC----C--------Cccc-ChhhcCHHHHHHHHHHcCCC
Confidence 11246788899876 332 22 2799999532 1 1100 0011 257999999999999
Q ss_pred cEEEE
Q 025039 171 GLFIS 175 (259)
Q Consensus 171 G~l~~ 175 (259)
|+|+.
T Consensus 207 G~l~t 211 (257)
T 2qy6_A 207 GTLAT 211 (257)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99885
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.36 E-value=1.2e-06 Score=80.38 Aligned_cols=133 Identities=18% Similarity=0.210 Sum_probs=86.2
Q ss_pred hHHHHhhcccC--CCCCcEEEEcCCCCcchHHHHhc----C----------CCeEEEeeCCHHHHHHHHHHHhhcCCCCe
Q 025039 46 SHFRHLVQPHI--KPNSSVLELGCGNSRLSEGLYND----G----------ITAITCIDLSAVAVEKMQERLLLKGYKEV 109 (259)
Q Consensus 46 ~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~----~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v 109 (259)
+.+..++...+ .++.+|+|.+||+|.++..+.+. + ...++|+|+++.+...|+-++..++....
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~ 282 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYP 282 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccc
Confidence 44555554333 35679999999999998876542 1 12699999999999999999888887667
Q ss_pred EEEEcccCCCcC----CCCceeEEEecceeeeeeeCCC-CCCCCCchhHHHHHHHHHHHHhccc-------CCcEEEEEe
Q 025039 110 KVLEADMLDLPF----SNDCFDVVIEKATMEVLFVNSG-DPWNPQPETVTKVMAMLEGVHRVLK-------PDGLFISVS 177 (259)
Q Consensus 110 ~~~~~d~~~~~~----~~~~fD~V~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~Lk-------pgG~l~~~~ 177 (259)
.+..+|....+. ....||+|++++++..-..... ..+...+........+++.+.+.|+ |||++.++.
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 788888765432 2357999999999843210000 0000000011122345666666665 799999886
Q ss_pred c
Q 025039 178 F 178 (259)
Q Consensus 178 ~ 178 (259)
+
T Consensus 363 P 363 (530)
T 3ufb_A 363 P 363 (530)
T ss_dssp E
T ss_pred c
Confidence 5
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.34 E-value=2.3e-06 Score=74.26 Aligned_cols=100 Identities=11% Similarity=0.094 Sum_probs=70.3
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecce
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 134 (259)
.+.+|.+|||+||++|..+..++++|. +|++||+.+- -.. +. ..++|+++.+|......+...+|+|+|..+
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l-~~~----l~--~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPM-AQS----LM--DTGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCC-CHH----HH--TTTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhc-Chh----hc--cCCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 357899999999999999999999987 9999998642 111 11 225799999999887766678999999765
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
. ......+++.........++.++.+-+
T Consensus 280 ~----------------~p~~~~~l~~~wl~~~~~~~aI~~lKL 307 (375)
T 4auk_A 280 E----------------KPAKVAALMAQWLVNGWCRETIFNLKL 307 (375)
T ss_dssp S----------------CHHHHHHHHHHHHHTTSCSEEEEEEEC
T ss_pred C----------------ChHHhHHHHHHHHhccccceEEEEEEe
Confidence 3 223344444444444444566555544
No 291
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.27 E-value=2.2e-06 Score=74.51 Aligned_cols=125 Identities=11% Similarity=0.125 Sum_probs=85.3
Q ss_pred CCCcEEEEcCCCCcchHHHHhc------------C----CC-eEEEeeCCHHHHHHHHHHHhhcCC--CC--eEEEEccc
Q 025039 58 PNSSVLELGCGNSRLSEGLYND------------G----IT-AITCIDLSAVAVEKMQERLLLKGY--KE--VKVLEADM 116 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~------------~----~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~--v~~~~~d~ 116 (259)
...+|+|+||++|..+..+... + +. +|+..|+-......+-+.+....- .. +.-+.+.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 4478999999999887766554 2 23 899999988888887776643110 11 23344556
Q ss_pred CCCcCCCCceeEEEecceeeeeeeCCCC-------CCCC-----------CchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 117 LDLPFSNDCFDVVIEKATMEVLFVNSGD-------PWNP-----------QPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 117 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~-------~~~~-----------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
....++.+++|+|+++.++|.+-.-+.. -|.. ...-..|...+|+..++.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 5556788999999999999876322211 0000 001235777889999999999999999877
Q ss_pred CCcc
Q 025039 179 GQPH 182 (259)
Q Consensus 179 ~~~~ 182 (259)
+.+.
T Consensus 211 gr~~ 214 (359)
T 1m6e_X 211 GRRS 214 (359)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 6644
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.20 E-value=3.5e-06 Score=70.35 Aligned_cols=72 Identities=17% Similarity=0.338 Sum_probs=60.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CCCCceeEEE
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCFDVVI 130 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~V~ 130 (259)
+.++..+||.+||.|..+..+++.+. +|+|+|.++.+++.+++ +.. ++++++++++.++. ...+++|.|+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g~~~vDgIL 94 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALGVERVDGIL 94 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcCCCCcCEEE
Confidence 45788999999999999999999844 99999999999999998 654 47999999998753 1225799998
Q ss_pred ec
Q 025039 131 EK 132 (259)
Q Consensus 131 ~~ 132 (259)
+.
T Consensus 95 ~D 96 (285)
T 1wg8_A 95 AD 96 (285)
T ss_dssp EE
T ss_pred eC
Confidence 63
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.14 E-value=1.2e-05 Score=67.39 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=69.5
Q ss_pred ccCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 54 PHIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
..+.++.+|||+||++|..+..+++. +...|+|+|+...+...... ....+ .++.....++.-..+..+.+|+|+|.
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~-~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG-WNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC-CceEEeecCceeeecCCCCcCEEeec
Confidence 34568899999999999999999986 43378999997532110000 00001 12332332222223345789999997
Q ss_pred ceeeeeeeCCCCCCCCCchhHH--HHHHHHHHHHhcccCC-cEEEEEecC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVT--KVMAMLEGVHRVLKPD-GLFISVSFG 179 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~Lkpg-G~l~~~~~~ 179 (259)
...+ . +. ...+ ....+|+-+.++|+|| |.|++-.|.
T Consensus 155 ~APn-s----G~------~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 155 IGES-S----SN------PLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-C----SS------HHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCC-C----CC------HHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 5543 2 11 0111 2235688888999999 999998776
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.08 E-value=7.7e-06 Score=69.41 Aligned_cols=56 Identities=16% Similarity=0.048 Sum_probs=47.7
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK 104 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 104 (259)
+..++.....++..|||++||+|..++.+++.|. +++|+|+++.+++.|++++...
T Consensus 225 ~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 225 AERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 3344444446789999999999999999999987 9999999999999999998654
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.82 E-value=4e-05 Score=62.00 Aligned_cols=114 Identities=20% Similarity=0.272 Sum_probs=73.8
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc-ccCCCcCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~V~~~ 132 (259)
.+.++.+|||+||++|..+..++.. +..+|+++|+-..--+.- ......|++.++|+.+ |+..++ ...+|+|+|.
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcD 151 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCD 151 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEEC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEeccceeecC--CccccEEEEe
Confidence 4568889999999999999977766 444899999875322100 0123446666999988 876654 2579999985
Q ss_pred ceeeeeeeCCCCCCCCCchhHH-HHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 133 ATMEVLFVNSGDPWNPQPETVT-KVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
..= .-+.|.-.. ...++|+-+.++|++ |-+++-.+.+.+
T Consensus 152 Ige----------Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 152 IGE----------SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCC----------CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred cCC----------CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 221 011111111 123477777899998 788876665544
No 296
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.82 E-value=2.8e-05 Score=64.58 Aligned_cols=57 Identities=18% Similarity=0.120 Sum_probs=48.0
Q ss_pred HHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC
Q 025039 48 FRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG 105 (259)
Q Consensus 48 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 105 (259)
+..++.....++..|||+.||+|..+..+.+.|. +++|+|+++..++.+++++...+
T Consensus 202 ~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 202 IERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcc
Confidence 3445555567889999999999999999999987 99999999999999999987654
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.80 E-value=1.1e-05 Score=66.15 Aligned_cols=107 Identities=18% Similarity=0.144 Sum_probs=64.9
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc--CC---CeEEEeeC--CHHHHHHHHHHHhh-cCCCCeEEEEc-ccCCCcCCCCc
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND--GI---TAITCIDL--SAVAVEKMQERLLL-KGYKEVKVLEA-DMLDLPFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~---~~v~~vD~--s~~~~~~a~~~~~~-~~~~~v~~~~~-d~~~~~~~~~~ 125 (259)
.++++.+|||+||++|..+..+++. .. ..++++|+ .|- ... .++.-+.++.+ |+.++. ...
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~--------~~~~~Gv~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPM--------LMQSYGWNIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCC--------CCCSTTGGGEEEECSCCGGGSC--CCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCC--------cccCCCceEEEeeccCCccCCC--CCC
Confidence 5678999999999999999999887 21 13445552 110 000 12111355556 888744 457
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCc-EEEEEecCC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDG-LFISVSFGQ 180 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG-~l~~~~~~~ 180 (259)
+|+|+|...-. . +++. .+..... .+|+-+.++|+||| .|++-.|..
T Consensus 140 ~DvVLSDMAPn-S----G~~~---vD~~Rs~-~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 140 SDTLLCDIGES-S----PSAE---IEEQRTL-RILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CSEEEECCCCC-C----SCHH---HHHHHHH-HHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCEEEeCCCCC-C----CccH---HHHHHHH-HHHHHHHHHhhcCCcEEEEEECCC
Confidence 99999864321 1 1100 0111111 26777779999999 999877764
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.70 E-value=0.00022 Score=59.50 Aligned_cols=111 Identities=17% Similarity=0.260 Sum_probs=71.4
Q ss_pred cCCCCCcEEEEcCCCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc-ccCCCcCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~V~~~ 132 (259)
.+.++..|||+||++|..+..++.. |...|+|+|+-..--+.- ......+...+.++.+ |+..++. ..+|+|+|.
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcD 167 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCD 167 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEEC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCCC--CCCCEEEEE
Confidence 4567889999999999999977766 444899999875311000 0001223334778776 8776653 569999985
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHH---HHHHHHHHhcccCC-cEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKV---MAMLEGVHRVLKPD-GLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~Lkpg-G~l~~~~~~~ 180 (259)
-. ... +....+. ..+|+-+.++|++| |-+++-.+.+
T Consensus 168 ig-eSs-----------~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 168 IG-ESS-----------SSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CC-CCC-----------SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred Cc-cCC-----------CChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 33 111 1111122 33677778999999 8888866665
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.57 E-value=3.6e-05 Score=64.29 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=76.0
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC-Cc---CCCCceeEEEecc
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LP---FSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~---~~~~~fD~V~~~~ 133 (259)
.+..+||+-+|+|.+++.+.+.+ .+++.+|.++..++..+++++. .+++++...|... +. .+...||+|++.+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred cCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 35678999999999999999865 5999999999999999999875 2468999999754 21 2335799999887
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHh--cccCCcEEEE
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHR--VLKPDGLFIS 175 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~ 175 (259)
++.. ..+..++++.+.+ .+.|+|++++
T Consensus 168 PYe~---------------k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 168 SYER---------------KEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CCCS---------------TTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCC---------------CcHHHHHHHHHHHhCccCCCeEEEE
Confidence 7642 1355566666654 4568888886
No 300
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.35 E-value=7e-05 Score=79.76 Aligned_cols=103 Identities=19% Similarity=0.174 Sum_probs=54.6
Q ss_pred CCCcEEEEcCCCCcchHHHHhcC------CCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-cCCCCceeEEE
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDG------ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-PFSNDCFDVVI 130 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~ 130 (259)
+..+|||+|.|+|..+..+.+.. ..+++..|+|+...+.++++++.. ++.....|..+. ++...+||+|+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~~~~~ydlvi 1316 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPGSLGKADLLV 1316 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC-----CCEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccCCCCceeEEE
Confidence 56799999999998766554431 127899999998888888877542 233221233221 22345799999
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+..++|.. .+....+.+++++|||||.+++.+.
T Consensus 1317 a~~vl~~t---------------~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1317 CNCALATL---------------GDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EECC-----------------------------------CCEEEEEEC
T ss_pred Eccccccc---------------ccHHHHHHHHHHhcCCCcEEEEEec
Confidence 99888654 5677899999999999999998753
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.32 E-value=0.00086 Score=58.04 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=49.8
Q ss_pred CCcEEEEcCCCCcchHHHHhcC-CCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC
Q 025039 59 NSSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL 119 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 119 (259)
+..|||||.|.|.++..|++.+ +.+++++|+++..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCccch
Confidence 5889999999999999999863 348999999999999998876 2 35799999999764
No 302
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.28 E-value=0.0027 Score=54.58 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=80.1
Q ss_pred CCCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcC---------------------CCCeEEEEc
Q 025039 57 KPNSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKG---------------------YKEVKVLEA 114 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---------------------~~~v~~~~~ 114 (259)
.+...|+.+|||.......+...+.. .++-+|. |++++.-++.+...+ -++..++..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35688999999999999988876443 6777776 888887777765531 135788888
Q ss_pred ccCCCc--------C-CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 115 DMLDLP--------F-SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 115 d~~~~~--------~-~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+.+.. . ..+...++++-+++.++ ..+...++++.+.+.. |+|.+++.+.-
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL-------------~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYM-------------HNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS-------------CHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC-------------CHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 887632 1 22456788888999888 6678889999998877 78887766543
No 303
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.22 E-value=0.00039 Score=59.46 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=57.1
Q ss_pred CCCCCcEEEEcCCCCcchHHHHhc-CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--CC----CCcee
Q 025039 56 IKPNSSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FS----NDCFD 127 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~----~~~fD 127 (259)
+.++..++|..||.|..+..+++. ++. +|+|+|.++.+++.++ ++. -++++++++++.++. ++ .+++|
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---~~Rv~lv~~nF~~l~~~L~~~g~~~~vD 130 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---DPRFSIIHGPFSALGEYVAERDLIGKID 130 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---CTTEEEEESCGGGHHHHHHHTTCTTCEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---CCcEEEEeCCHHHHHHHHHhcCCCCccc
Confidence 357899999999999999999987 454 9999999999999984 442 246899999887753 11 13689
Q ss_pred EEEec
Q 025039 128 VVIEK 132 (259)
Q Consensus 128 ~V~~~ 132 (259)
.|+..
T Consensus 131 gILfD 135 (347)
T 3tka_A 131 GILLD 135 (347)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 88864
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.20 E-value=0.00064 Score=59.47 Aligned_cols=70 Identities=17% Similarity=0.184 Sum_probs=57.2
Q ss_pred CcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC--------CCCceeEEEe
Q 025039 60 SSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF--------SNDCFDVVIE 131 (259)
Q Consensus 60 ~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------~~~~fD~V~~ 131 (259)
.+++|+.||.|.++..+.++|...+.++|+++.+++..+.++ ++..++++|+.++.. ....+|+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 479999999999999999999867789999999999888775 356778889887531 2357999997
Q ss_pred cce
Q 025039 132 KAT 134 (259)
Q Consensus 132 ~~~ 134 (259)
..+
T Consensus 78 gpP 80 (376)
T 3g7u_A 78 GPP 80 (376)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 305
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.18 E-value=0.00088 Score=55.96 Aligned_cols=117 Identities=11% Similarity=0.036 Sum_probs=71.2
Q ss_pred HHHHhhc---ccCCCCCcEEEEcC------CCCcchHHHHhcCCC--eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc
Q 025039 47 HFRHLVQ---PHIKPNSSVLELGC------GNSRLSEGLYNDGIT--AITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD 115 (259)
Q Consensus 47 ~~~~~l~---~~~~~~~~vLDiGc------G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 115 (259)
.+-+.+. ..++.+.+|||+|+ -+|. ..+.+.++. .|+++|+.+-. ...+ .++++|
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~-----------sda~-~~IqGD 160 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV-----------SDAD-STLIGD 160 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB-----------CSSS-EEEESC
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc-----------cCCC-eEEEcc
Confidence 3445553 22457899999997 4565 334444553 89999998631 1113 448899
Q ss_pred cCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCcc
Q 025039 116 MLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 182 (259)
Q Consensus 116 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 182 (259)
...... ...||+|++...-.. .|..-.+..+...-.+.+++-+.+.|+|||.|++-.|....
T Consensus 161 ~~~~~~-~~k~DLVISDMAPNt----TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 161 CATVHT-ANKWDLIISDMYDPR----TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp GGGEEE-SSCEEEEEECCCCTT----SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred cccccc-CCCCCEEEecCCCCc----CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 766443 478999998543211 11100111112335567788888999999999997775543
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.06 E-value=0.00038 Score=60.19 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=56.6
Q ss_pred CCcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC---CCCceeEEEecc
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---SNDCFDVVIEKA 133 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~V~~~~ 133 (259)
..+|+|+.||.|.+...+.+.|. ..+.++|+++.+++..+.++. +..++++|+.++.. +...+|+|+...
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 35799999999999999999994 379999999999999998864 34567888877541 112589999876
Q ss_pred e
Q 025039 134 T 134 (259)
Q Consensus 134 ~ 134 (259)
+
T Consensus 77 P 77 (343)
T 1g55_A 77 P 77 (343)
T ss_dssp C
T ss_pred C
Confidence 5
No 307
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.96 E-value=0.001 Score=56.87 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=54.2
Q ss_pred HHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC
Q 025039 47 HFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD 118 (259)
Q Consensus 47 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 118 (259)
.+..++.....++..|||..||+|..+....+.|. +.+|+|+++..++.+++++...+. ....++.|+.+
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~ 310 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNI-SEEKITDIYNR 310 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCS-CHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhccc-chHHHHHHHHH
Confidence 34455555567899999999999999999999987 999999999999999999876543 23334444444
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.88 E-value=0.0023 Score=54.86 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=55.9
Q ss_pred CCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC-CCCceeEEEecceee
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-SNDCFDVVIEKATME 136 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~~~l~ 136 (259)
+.+++|+.||.|.+...+.+.|...+.++|+++.+++..+.++... . ++|+.++.. .-..+|+|+...+-.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~----~---~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK----P---EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC----C---BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC----C---cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 5689999999999999999999877889999999999999887432 1 577776531 113589999876544
No 309
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.74 E-value=0.0015 Score=55.78 Aligned_cols=57 Identities=21% Similarity=0.233 Sum_probs=47.0
Q ss_pred HHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCH---HHHHHHHHHHhhc
Q 025039 47 HFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSA---VAVEKMQERLLLK 104 (259)
Q Consensus 47 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~---~~~~~a~~~~~~~ 104 (259)
.+..++.....++..|||..||+|..+....+.|. +.+|+|+++ ..++.+++++...
T Consensus 231 l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 231 VIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 34455555567899999999999999999999987 999999999 9999999987644
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.66 E-value=0.0073 Score=52.40 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=65.5
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC----C-cCCCCcee
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD----L-PFSNDCFD 127 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~-~~~~~~fD 127 (259)
.+.++.+||.+|||. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++..+-.+ + ....+.+|
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT--HVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS--EEEETTTSCHHHHHHHHTTSCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC--EEecCCccCHHHHHHHhcCCCCc
Confidence 466889999999987 8888888775 554799999999988888654 322 222211111 1 11123799
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+..... ...+..+.+.|+++|.++++..
T Consensus 261 ~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 261 FALESTGS---------------------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEECSCC---------------------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCC---------------------HHHHHHHHHHHhcCCEEEEeCC
Confidence 99853211 2467888999999999998654
No 311
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.51 E-value=0.021 Score=47.05 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=71.6
Q ss_pred CCCCcEEEEcCCCCcchHHHHhc-------CCC-eEEEee-----CCH----------------------HHHHHH---H
Q 025039 57 KPNSSVLELGCGNSRLSEGLYND-------GIT-AITCID-----LSA----------------------VAVEKM---Q 98 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~~~~~l~~~-------~~~-~v~~vD-----~s~----------------------~~~~~a---~ 98 (259)
.-+..|+|+||-.|..+..++.. +.. +++++| +.+ +.++.. .
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44679999999999988886652 333 899999 321 112211 1
Q ss_pred HHHhhcCC--CCeEEEEcccCC-Cc-----CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC
Q 025039 99 ERLLLKGY--KEVKVLEADMLD-LP-----FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD 170 (259)
Q Consensus 99 ~~~~~~~~--~~v~~~~~d~~~-~~-----~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 170 (259)
++.+..+. +++.++.+++.+ ++ .+..++|+|+..+- ........++.+...|+||
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-----------------~Y~~t~~~le~~~p~l~~G 210 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-----------------LYEPTKAVLEAIRPYLTKG 210 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-----------------CHHHHHHHHHHHGGGEEEE
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-----------------ccchHHHHHHHHHHHhCCC
Confidence 22233443 469999999865 22 23457999986442 1145567889999999999
Q ss_pred cEEEEEecCC
Q 025039 171 GLFISVSFGQ 180 (259)
Q Consensus 171 G~l~~~~~~~ 180 (259)
|++++-++..
T Consensus 211 GvIv~DD~~~ 220 (257)
T 3tos_A 211 SIVAFDELDN 220 (257)
T ss_dssp EEEEESSTTC
T ss_pred cEEEEcCCCC
Confidence 9999977753
No 312
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.37 E-value=0.01 Score=50.08 Aligned_cols=77 Identities=17% Similarity=0.070 Sum_probs=58.8
Q ss_pred ccCCCCCcEEEEcCCCCcchHHHHhcCCCe--EEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC---C-CCcee
Q 025039 54 PHIKPNSSVLELGCGNSRLSEGLYNDGITA--ITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---S-NDCFD 127 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~-~~~fD 127 (259)
.....+.+++|+.||.|.+...+.+.|... +.++|+++.+++.-+.+. +...+..+|+.++.. + ...+|
T Consensus 11 ~~~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 11 AEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCCCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCS
T ss_pred cccCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcC
Confidence 334456789999999999999999999863 699999999988877765 245677889887641 1 13689
Q ss_pred EEEeccee
Q 025039 128 VVIEKATM 135 (259)
Q Consensus 128 ~V~~~~~l 135 (259)
+++...+=
T Consensus 86 ll~ggpPC 93 (295)
T 2qrv_A 86 LVIGGSPC 93 (295)
T ss_dssp EEEECCCC
T ss_pred EEEecCCC
Confidence 99976543
No 313
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.35 E-value=0.0082 Score=53.03 Aligned_cols=61 Identities=11% Similarity=0.178 Sum_probs=49.0
Q ss_pred CCCCCcEEEEcCCCCcchHHHH-hcCC--CeEEEeeCCHHHHHHHHHHHhh---cCC-CCeEEEEccc
Q 025039 56 IKPNSSVLELGCGNSRLSEGLY-NDGI--TAITCIDLSAVAVEKMQERLLL---KGY-KEVKVLEADM 116 (259)
Q Consensus 56 ~~~~~~vLDiGcG~G~~~~~l~-~~~~--~~v~~vD~s~~~~~~a~~~~~~---~~~-~~v~~~~~d~ 116 (259)
+.++..|+|+||+.|..+..++ +.+. .+|+++|+++...+.++++++. ++. +++.++..-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 3678999999999999999887 4443 3899999999999999999887 234 5677765443
No 314
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.27 E-value=0.013 Score=50.38 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=66.8
Q ss_pred ccCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-----c-CCCCc
Q 025039 54 PHIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDC 125 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~~ 125 (259)
..+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++..+-.++ . .....
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT--DIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC--EEECGGGSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc--eEEcCCCcCHHHHHHHHcCCCC
Confidence 3467899999999987 8888888876 443899999999988888764 321 2222111111 0 12346
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|+|+....- ...+..+.+.|+|+|.++++...
T Consensus 236 ~D~v~d~~g~---------------------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 236 VDKVVIAGGD---------------------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEEEEECSSC---------------------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCEEEECCCC---------------------hHHHHHHHHHHhcCCEEEEeccc
Confidence 9999853211 14678888999999999987543
No 315
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.26 E-value=0.0048 Score=53.00 Aligned_cols=70 Identities=17% Similarity=0.306 Sum_probs=54.7
Q ss_pred CcEEEEcCCCCcchHHHHhcCC--CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc---CCCCceeEEEecce
Q 025039 60 SSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVIEKAT 134 (259)
Q Consensus 60 ~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~ 134 (259)
.+++|+.||.|.+...+.+.|. ..+.++|+++.+++.-+.++. ...+..+|+.++. ++...+|+++...+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 4799999999999999999886 368899999999998888763 3456678887754 22236899987643
No 316
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.21 E-value=0.008 Score=51.25 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=53.8
Q ss_pred cEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC-CCCceeEEEecc
Q 025039 61 SVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-SNDCFDVVIEKA 133 (259)
Q Consensus 61 ~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~~ 133 (259)
+|||+-||.|.+...+.+.|+.-+.++|+++.+++.-+.++. -.++.+|+.++.. .-..+|+++...
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~------~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS------AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC------SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC------CCcccCChhhCCHhhCCcccEEEecC
Confidence 699999999999999999998777899999999988887752 3567889887642 123689988654
No 317
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.18 E-value=0.012 Score=50.50 Aligned_cols=94 Identities=14% Similarity=0.170 Sum_probs=65.4
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
.+.++.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++. |.+. ++ .+...+ . ..+|+|+..
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~~--v~-~~~~~~--~-~~~D~vid~ 241 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM----GVKH--FY-TDPKQC--K-EELDFIIST 241 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT----TCSE--EE-SSGGGC--C-SCEEEEEEC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc----CCCe--ec-CCHHHH--h-cCCCEEEEC
Confidence 567899999999987 7888877775 55 999999999888877653 4322 22 332222 2 279999853
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
..-. ..+..+.+.|+|+|.++++....
T Consensus 242 ~g~~---------------------~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 242 IPTH---------------------YDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp CCSC---------------------CCHHHHHTTEEEEEEEEECCCCC
T ss_pred CCcH---------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence 2210 24677889999999999875443
No 318
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.11 E-value=0.0082 Score=51.38 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=54.9
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC--CeE-EEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc---CCCCceeEEEe
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI--TAI-TCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVIE 131 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v-~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~~ 131 (259)
...+++|+.||.|.+...+.+.|. ..+ .++|+++.+++.-+.++.. . ++++|+.++. ++...+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEe
Confidence 356899999999999999999985 356 7999999999999988742 2 4577887764 22236899997
Q ss_pred cce
Q 025039 132 KAT 134 (259)
Q Consensus 132 ~~~ 134 (259)
..+
T Consensus 83 gpP 85 (327)
T 3qv2_A 83 SPP 85 (327)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.03 E-value=0.0092 Score=51.45 Aligned_cols=97 Identities=21% Similarity=0.219 Sum_probs=64.7
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc------cC-CCc-CCCC
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD------ML-DLP-FSND 124 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~-~~~-~~~~ 124 (259)
.+.++.+||.+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++..+ .. .+. ....
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----GAD--LVLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS--EEEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC--EEEcCcccccchHHHHHHHHhCC
Confidence 467889999999986 8888888775 444899999999888887643 432 222211 11 010 0114
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+|+|+..... ...+....++|+|+|.++++..
T Consensus 242 g~D~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 242 KPEVTIECTGA---------------------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCSEEEECSCC---------------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCEEEECCCC---------------------hHHHHHHHHHhcCCCEEEEEec
Confidence 69999853211 2356778899999999998754
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.03 E-value=0.047 Score=47.03 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=67.1
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE-----cccCC-C--cCCCC
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE-----ADMLD-L--PFSND 124 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-----~d~~~-~--~~~~~ 124 (259)
.+.++.+||-+|+|. |..+..+++. |...|+++|.+++.++.+++. ... .+.... .++.+ + .....
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---VVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---CEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---cccccccccchHHHHHHHHHHhCCC
Confidence 467899999999977 8888888776 553599999999999998875 211 122221 11111 0 01234
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.+|+|+....- ...+..+.++|++||.++++...
T Consensus 252 g~Dvvid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 252 EPAVALECTGV---------------------ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CCSEEEECSCC---------------------HHHHHHHHHHSCTTCEEEECCCC
T ss_pred CCCEEEECCCC---------------------hHHHHHHHHHhcCCCEEEEEccC
Confidence 79999853211 24677888999999999987653
No 321
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.02 E-value=0.016 Score=48.91 Aligned_cols=121 Identities=17% Similarity=0.179 Sum_probs=68.3
Q ss_pred CCCcEEEEcCCCCcchHHHH----hcCCC---eEEEeeCC------------HHHHHHHHHHHhhcCCCC--eEEEEccc
Q 025039 58 PNSSVLELGCGNSRLSEGLY----NDGIT---AITCIDLS------------AVAVEKMQERLLLKGYKE--VKVLEADM 116 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~----~~~~~---~v~~vD~s------------~~~~~~a~~~~~~~~~~~--v~~~~~d~ 116 (259)
+.-+|||+|=|+|....... +.++. +++.+|.. ....+...+........+ .++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 34679999999998764332 22433 45666631 111222222211111123 35667887
Q ss_pred CC-Cc-CCCCceeEEEecceeeeeeeCCCC--CCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCCccccccccCCCC
Q 025039 117 LD-LP-FSNDCFDVVIEKATMEVLFVNSGD--PWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQ 192 (259)
Q Consensus 117 ~~-~~-~~~~~fD~V~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 192 (259)
.+ ++ +....||+|+. |.+ ....+ .|. .++++.++++++|||.+. +++.....+.-+...+
T Consensus 176 ~~~l~~l~~~~~Da~fl----DgF-sP~kNPeLWs---------~e~f~~l~~~~~pgg~la--TYtaag~VRR~L~~aG 239 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFH----DAF-SPYKNPELWT---------LDFLSLIKERIDEKGYWV--SYSSSLSVRKSLLTLG 239 (308)
T ss_dssp HHHGGGCCSCCEEEEEE----CCS-CTTTSGGGGS---------HHHHHHHHTTEEEEEEEE--ESCCCHHHHHHHHHTT
T ss_pred HHHHhhhcccceeEEEe----CCC-CcccCcccCC---------HHHHHHHHHHhCCCcEEE--EEeCcHHHHHHHHHCC
Confidence 65 32 34457999984 332 11111 122 589999999999999887 5666555555555566
Q ss_pred CC
Q 025039 193 FT 194 (259)
Q Consensus 193 ~~ 194 (259)
|.
T Consensus 240 F~ 241 (308)
T 3vyw_A 240 FK 241 (308)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 322
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.95 E-value=0.028 Score=47.95 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=65.0
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeE
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDV 128 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~ 128 (259)
.+.++.+||-.|+|. |..+..+++. |. +|+++|.+++.++.+++. |.+ .++...-.+.. ...+.+|+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~~i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRL----GAE--VAVNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT----TCS--EEEETTTSCHHHHHHHHHSSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc----CCC--EEEeCCCcCHHHHHHHhCCCCCE
Confidence 456889999999986 8888888775 55 999999999988887653 322 22221111110 01136888
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+....- ...++.+.+.|+|+|.++++...
T Consensus 236 vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 236 VLVTAVS---------------------PKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp EEESSCC---------------------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEEeCCC---------------------HHHHHHHHHHhccCCEEEEeCCC
Confidence 8753211 24678888999999999986543
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.92 E-value=0.02 Score=49.78 Aligned_cols=97 Identities=15% Similarity=0.222 Sum_probs=65.1
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc--cCCC-----cCCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD--MLDL-----PFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~-----~~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++... -.++ ....+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GVN--EFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TCC--EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc--EEEccccCchhHHHHHHHhcCCC
Confidence 456889999999986 8888877775 554899999999888877642 432 222211 0111 012237
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 178 (259)
+|+|+....- ...+..+.+.|++| |.++++..
T Consensus 264 ~D~vid~~g~---------------------~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 264 VDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp BSEEEECSCC---------------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCCC---------------------HHHHHHHHHHhhccCCEEEEEcc
Confidence 9999853211 24678889999997 99998754
No 324
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.90 E-value=0.037 Score=47.98 Aligned_cols=99 Identities=24% Similarity=0.273 Sum_probs=66.7
Q ss_pred ccCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE---cccCC-C-c---CCC
Q 025039 54 PHIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE---ADMLD-L-P---FSN 123 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~-~-~---~~~ 123 (259)
..+.++.+||-.|+|. |..+..+++. |..+|+++|.+++..+.+++. |.+ .++. .|+.+ + . ...
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT--ATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS--EEECTTSSCHHHHHHSTTSSST
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC--EEECCCCcCHHHHHHhhhhccC
Confidence 3467899999999976 7788888776 444899999999988887764 432 1221 11111 0 0 123
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+.+|+|+..... ...+..+.++|++||.++++...
T Consensus 252 gg~Dvvid~~G~---------------------~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 252 GGVDVVIECAGV---------------------AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp TCEEEEEECSCC---------------------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCCEEEECCCC---------------------HHHHHHHHHHhccCCEEEEEecc
Confidence 479999853211 24678888999999999987543
No 325
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.89 E-value=0.0028 Score=54.97 Aligned_cols=92 Identities=11% Similarity=0.199 Sum_probs=62.5
Q ss_pred CCCcEEEEc-CCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc--ccCC-C-cCCCCceeEEE
Q 025039 58 PNSSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA--DMLD-L-PFSNDCFDVVI 130 (259)
Q Consensus 58 ~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~--d~~~-~-~~~~~~fD~V~ 130 (259)
++.+||-.| +|. |..+..+++. +..+|++++.+++.++.+++. |.+ .++.. ++.+ + ....+.+|+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----Gad--~vi~~~~~~~~~v~~~~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----GAH--HVIDHSKPLAAEVAALGLGAPAFVF 244 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----TCS--EEECTTSCHHHHHHTTCSCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----CCC--EEEeCCCCHHHHHHHhcCCCceEEE
Confidence 678999999 665 8899999886 444999999999888887652 432 22211 1100 0 12235799988
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
.... ....++.+.++|+++|.++++
T Consensus 245 d~~g---------------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 245 STTH---------------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ECSC---------------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ECCC---------------------chhhHHHHHHHhcCCCEEEEE
Confidence 5321 124678888999999999986
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.87 E-value=0.017 Score=49.67 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=63.8
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc-CCCc------CC---
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LDLP------FS--- 122 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~------~~--- 122 (259)
.+.++.+||-+|+|. |..+..+++. |. +|+++|.+++.++.+++. |.+ .++..+- .+.. ..
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNC----GAD--VTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT----TCS--EEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHh----CCC--EEEcCcccccHHHHHHHHhcccc
Confidence 467889999999876 7777777764 55 799999999988887643 432 2222110 1110 11
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
...+|+|+..... ...++.+.++|+|+|.++.+..
T Consensus 238 g~g~D~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 238 GDLPNVTIDCSGN---------------------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SSCCSEEEECSCC---------------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCCCEEEECCCC---------------------HHHHHHHHHHHhcCCEEEEEec
Confidence 2469999853211 2357778899999999998654
No 327
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.85 E-value=0.015 Score=50.87 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=65.5
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-c------CCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 125 (259)
.+.++.+||.+|||. |..+..+++. |..+|+++|.+++.++.+++ .|. .++...-.+. . .....
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF---ETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC---EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC---cEEcCCCcchHHHHHHHHhCCCC
Confidence 456889999999987 8888888775 54489999999998887764 243 2332111111 0 11236
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+....-..........+ ......+..+.++|++||.++++..
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANT-------ETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTS-------BCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCEEEECCCCccccccccccc-------cccHHHHHHHHHHHhcCCEEEEecc
Confidence 999985422110000000000 0012367888899999999987643
No 328
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.84 E-value=0.029 Score=49.05 Aligned_cols=111 Identities=13% Similarity=0.194 Sum_probs=66.5
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC-----Cc--CCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-----LP--FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~~--~~~~~ 125 (259)
.+.++.+||.+|||. |..+..+++. |..+|+++|.+++.++.+++. |. ..+...-.+ +. .....
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GF---EIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC---EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----CC---cEEccCCcchHHHHHHHHhCCCC
Confidence 466889999999987 8888888875 544799999999988888653 43 222211101 10 12246
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+........... +. ..+.......++.+.++|++||.++++..
T Consensus 255 ~Dvvid~~G~~~~~~~----~~--~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHG----HE--GAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSS----TT--GGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccc----cc--cccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 9999864221100000 00 00000112467888899999999987653
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.82 E-value=0.022 Score=49.28 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=65.3
Q ss_pred ccCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 54 PHIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
..++++.+||-+|+|. |..+..+++. |. +|+++|.+++.++.+++. |.+ .++..+-.++. .....
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL----GAD--HGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS--EEEETTTSCHHHHHHHHHTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc----CCC--EEEcCCcccHHHHHHHHhCCCC
Confidence 3456889999999887 7777777775 55 999999999988887653 432 22222111110 12337
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|+|+.... ...+..+.+.|+|+|.++++...
T Consensus 258 ~D~vid~~g----------------------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 258 ADHILEIAG----------------------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEEEEEETT----------------------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEECCC----------------------hHHHHHHHHHhhcCCEEEEEecC
Confidence 999985321 12467788899999999987643
No 330
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.71 E-value=0.12 Score=43.72 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=75.0
Q ss_pred CCcEEEEcCCCCcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCC---CCeEEEEcccCCCc---------CCCCc
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY---KEVKVLEADMLDLP---------FSNDC 125 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~---------~~~~~ 125 (259)
...|+++|||-=.....+.. ... +++-+| .|.+++..++.+...+. .+..++..|+.+ . +....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 35799999997665544432 222 788899 59999998888864321 347788888876 2 11123
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.=++++-++++++ ..+....+++.+...+.||+.+++....
T Consensus 180 Pt~~i~Egvl~Yl-------------~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMYL-------------PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGGS-------------CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhhC-------------CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 4467778888887 4568889999999999999998886544
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.63 E-value=0.03 Score=49.17 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=63.6
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCce
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~f 126 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++..+-.++. .....+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD--HVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS--EEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC--EEEcCCCCCHHHHHHHHhCCCCC
Confidence 467889999999976 7788888776 444899999999988888754 321 22221111110 123469
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+|+....- .......+++.+.+.++++|.++++...
T Consensus 284 D~vid~~g~----------------~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 284 KLFLEATGV----------------PQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp SEEEECSSC----------------HHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CEEEECCCC----------------cHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 999853211 0012233334444556999999987543
No 332
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.62 E-value=0.01 Score=50.16 Aligned_cols=89 Identities=15% Similarity=0.298 Sum_probs=59.7
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEec
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 132 (259)
.++++.+||-.|+|. |..+..+++. |. +|++++ +++.++.+++. |. -.++ .|...+ ...+|+|+..
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga--~~v~-~d~~~v---~~g~Dvv~d~ 206 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GV--RHLY-REPSQV---TQKYFAIFDA 206 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TE--EEEE-SSGGGC---CSCEEEEECC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CC--CEEE-cCHHHh---CCCccEEEEC
Confidence 456889999999975 8888877775 66 999999 88888887663 32 1222 232222 4679998842
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.. . ..+....++|+++|.++.+.
T Consensus 207 ~g--------------------~--~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 207 VN--------------------S--QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -----------------------------TTGGGEEEEEEEEEEC
T ss_pred CC--------------------c--hhHHHHHHHhcCCCEEEEEe
Confidence 11 0 12356789999999999874
No 333
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.62 E-value=0.014 Score=50.06 Aligned_cols=98 Identities=14% Similarity=0.260 Sum_probs=66.5
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc--cCC-C-c-CCCCcee
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD--MLD-L-P-FSNDCFD 127 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~-~-~-~~~~~fD 127 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+. ++..+ ..+ + . .....+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----Ga~~--~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----GADA--AVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----TCSE--EEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CCCE--EEcCCCcHHHHHHHHhCCCCCe
Confidence 467889999999987 8888888875 344999999999988888653 4322 22211 111 0 0 1223799
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|+....- ...++.+.+.|+++|.++++...
T Consensus 242 ~v~d~~G~---------------------~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 242 AVFDFVGA---------------------QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp EEEESSCC---------------------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEEECCCC---------------------HHHHHHHHHHHhcCCEEEEECCC
Confidence 98853211 24678889999999999987543
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.013 Score=50.80 Aligned_cols=94 Identities=20% Similarity=0.311 Sum_probs=62.8
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc---ccCCCcCCCCceeEE
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA---DMLDLPFSNDCFDVV 129 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~~~~~fD~V 129 (259)
.+.++.+||.+|+|. |..+..+++. |. +|++++.+++.++.+++. |.+ .++.. +..+ ... ..+|+|
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~-~~~-~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL----GAD--EVVNSRNADEMA-AHL-KSFDFI 261 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS--EEEETTCHHHHH-TTT-TCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCc--EEeccccHHHHH-Hhh-cCCCEE
Confidence 467889999999986 7777777765 55 899999999888888753 332 22211 1111 111 479998
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+....- ...++.+.+.|+++|.++.+..
T Consensus 262 id~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 262 LNTVAA---------------------PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EECCSS---------------------CCCHHHHHTTEEEEEEEEECCC
T ss_pred EECCCC---------------------HHHHHHHHHHhccCCEEEEecc
Confidence 853221 0235677889999999987644
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.57 E-value=0.038 Score=47.83 Aligned_cols=97 Identities=15% Similarity=0.188 Sum_probs=64.5
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc-----cCC-C-cCCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d-----~~~-~-~~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++..+ +.+ + ....+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GAT--ECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TCS--EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCc--EEEecccccchHHHHHHHHhCCC
Confidence 456889999999986 7778777775 544799999999888887643 432 222111 111 0 011237
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 178 (259)
+|+|+..... ...+..+.++|+++ |.++++..
T Consensus 262 ~Dvvid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 262 VDYAVECAGR---------------------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp BSEEEECSCC---------------------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCEEEECCCC---------------------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 9999853211 24678888999999 99987654
No 336
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.49 E-value=0.0063 Score=52.22 Aligned_cols=94 Identities=18% Similarity=0.206 Sum_probs=63.3
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc---CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE----cccC-CCcCCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND---GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE----ADML-DLPFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~----~d~~-~~~~~~~~ 125 (259)
.+ ++.+||-+|+|. |..+..+++. |. +|+++|.+++.++.+++. |.+ .++. .+.. .+. ....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~-~g~g 238 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----GAD--YVSEMKDAESLINKLT-DGLG 238 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----TCS--EEECHHHHHHHHHHHH-TTCC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----CCC--EEeccccchHHHHHhh-cCCC
Confidence 45 889999999976 7777777765 55 899999999988888753 322 2221 1111 111 1236
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+..... ...++.+.++|+|+|.++.+..
T Consensus 239 ~D~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 239 ASIAIDLVGT---------------------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEEESSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred ccEEEECCCC---------------------hHHHHHHHHHhhcCCEEEEeCC
Confidence 9999864221 2367788899999999988654
No 337
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.40 E-value=0.052 Score=46.90 Aligned_cols=97 Identities=15% Similarity=0.236 Sum_probs=64.3
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc-c----cCC-C-cCCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-D----MLD-L-PFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d----~~~-~-~~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++.. + +.+ + ....+.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT--ECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS--EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc--eEeccccccccHHHHHHHHhCCC
Confidence 456889999999876 7777777775 544799999999888888653 332 22211 1 111 0 011237
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 178 (259)
+|+|+..... ...+..+.++|+++ |.++++..
T Consensus 261 ~D~vid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 261 VDYSFECIGN---------------------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp BSEEEECSCC---------------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCCc---------------------HHHHHHHHHhhccCCcEEEEEec
Confidence 9998853211 24678888999999 99998654
No 338
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.37 E-value=0.17 Score=37.14 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=60.3
Q ss_pred CCcEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEec
Q 025039 59 NSSVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 132 (259)
..+|+-+|||. |. ++..|.+.|. +|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|+|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~-------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER-------GVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------TCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc-------CCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 45799999986 54 3445555677 899999999988877652 4677888876532 123468888753
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.. +... ...+-...+.+.|+..++.....
T Consensus 79 ~~-----------------~~~~-n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 79 IP-----------------NGYE-AGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp CS-----------------CHHH-HHHHHHHHHHHCSSSEEEEEESS
T ss_pred CC-----------------ChHH-HHHHHHHHHHHCCCCeEEEEECC
Confidence 21 1112 22233355667788887765443
No 339
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.22 E-value=0.044 Score=46.63 Aligned_cols=95 Identities=20% Similarity=0.259 Sum_probs=62.4
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
.+.++.+||-.|+ |. |..+..+++. |. +|++++.+++.++.+++. +. . .++..+-.+.. .....
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga-~-~~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEY----GA-E-YLINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT----TC-S-EEEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC-c-EEEeCCCchHHHHHHHHhCCCC
Confidence 4568899999994 43 7777777665 55 999999999888877653 32 1 22221111110 12346
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+....- ..+..+.+.|+++|.++.+..
T Consensus 218 ~D~vid~~g~----------------------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 218 VDASFDSVGK----------------------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEEEECCGG----------------------GGHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCh----------------------HHHHHHHHHhccCCEEEEEcC
Confidence 9999864211 356778889999999998754
No 340
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.20 E-value=0.04 Score=46.70 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=63.5
Q ss_pred cCCCCCcEEEEc-CCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 55 HIKPNSSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
.++++.+||-.| +|. |..+..+++. |. +|++++.+++.++.+++. +. . .++...-.+.. .....
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga-~-~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----GA-W-ETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TC-S-EEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC-C-EEEeCCCccHHHHHHHHhCCCC
Confidence 456889999999 444 7777777664 66 999999999988888753 32 1 22221111110 12347
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|+|+....- ..+..+.+.|+++|.++++...
T Consensus 210 ~Dvvid~~g~----------------------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 210 CPVVYDGVGQ----------------------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp EEEEEESSCG----------------------GGHHHHHTTEEEEEEEEECCCT
T ss_pred ceEEEECCCh----------------------HHHHHHHHHhcCCCEEEEEecC
Confidence 9998864221 3567788999999999987543
No 341
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.18 E-value=0.15 Score=43.41 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=64.1
Q ss_pred ccCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 54 PHIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
..+.++.+||-.|+|. |..+..+++. |...++++|.+++.++.+++. |.+ .++...-.+.. .....
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~--~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM--QTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS--EEEETTTSCHHHHHHHHGGGCS
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe--EEEeCCCCCHHHHHHhhcccCC
Confidence 3456889999999987 6666666665 554788999999988887753 422 22221111100 12345
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
+|+|+.... ....++...++|++||.+++....
T Consensus 230 ~d~v~d~~G---------------------~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 230 NQLILETAG---------------------VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp SEEEEECSC---------------------SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred ccccccccc---------------------ccchhhhhhheecCCeEEEEEecc
Confidence 788775321 125677888999999999986543
No 342
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.15 E-value=0.02 Score=51.54 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=46.8
Q ss_pred CCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL 119 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 119 (259)
..+++|+.||.|.+...+.+.|...+.++|+++.+++.-+.++... +...++++|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhh
Confidence 3579999999999999999999867899999999998888776321 2345667787654
No 343
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.15 E-value=0.042 Score=47.29 Aligned_cols=93 Identities=19% Similarity=0.289 Sum_probs=61.0
Q ss_pred CCCC------CcEEEEcCCC-Ccch-HHHH-hc-CCCeEEEeeCCHH---HHHHHHHHHhhcCCCCeEEEEcccCCCcCC
Q 025039 56 IKPN------SSVLELGCGN-SRLS-EGLY-ND-GITAITCIDLSAV---AVEKMQERLLLKGYKEVKVLEADMLDLPFS 122 (259)
Q Consensus 56 ~~~~------~~vLDiGcG~-G~~~-~~l~-~~-~~~~v~~vD~s~~---~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 122 (259)
+.++ .+||-+|+|. |..+ ..++ +. |..+|++++.+++ .++.+++. |. ... |..+..+.
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l----Ga---~~v--~~~~~~~~ 234 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL----DA---TYV--DSRQTPVE 234 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT----TC---EEE--ETTTSCGG
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc----CC---ccc--CCCccCHH
Confidence 4577 8999999976 7777 7777 54 5524999999887 77777642 32 211 22211100
Q ss_pred -----CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 -----NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 -----~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+.+|+|+....- ...++.+.++|+++|.++.+..
T Consensus 235 ~i~~~~gg~Dvvid~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 235 DVPDVYEQMDFIYEATGF---------------------PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp GHHHHSCCEEEEEECSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred HHHHhCCCCCEEEECCCC---------------------hHHHHHHHHHHhcCCEEEEEeC
Confidence 2368998853211 2357788899999999998654
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.11 E-value=0.071 Score=45.63 Aligned_cols=96 Identities=21% Similarity=0.200 Sum_probs=62.8
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC----c--CCCCce
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----P--FSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~f 126 (259)
.+ ++.+||-+|+|. |..+..+++. |..+|++++.+++.++.+++. +.+ .++..+-.++ . .....+
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~--~~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD--YVINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS--EEECTTTSCHHHHHHHHTTTSCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC--EEECCCCcCHHHHHHHHcCCCCC
Confidence 45 789999999975 7777777765 443899999999888887653 321 1221111111 0 112369
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|+|+..... ...++.+.+.|+++|.++.+..
T Consensus 238 D~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 238 DVFLEFSGA---------------------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEECSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCC---------------------HHHHHHHHHHHhcCCEEEEEcc
Confidence 999854221 2467788899999999988654
No 345
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.09 E-value=0.042 Score=42.84 Aligned_cols=93 Identities=20% Similarity=0.192 Sum_probs=59.2
Q ss_pred cCCCCCcEEEEcCC--CCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--------CCC
Q 025039 55 HIKPNSSVLELGCG--NSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSN 123 (259)
Q Consensus 55 ~~~~~~~vLDiGcG--~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~~ 123 (259)
.+.++.+||..|++ .|..+..++. .|. +|+++|.+++..+.+++ .+. . ... |..+.. ...
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~-~-~~~--d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGV-E-YVG--DSRSVDFADEILELTDG 105 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCC-S-EEE--ETTCSTHHHHHHHHTTT
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCC-C-EEe--eCCcHHHHHHHHHHhCC
Confidence 45688999999953 3655555544 476 89999999887776643 232 1 112 222110 122
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..+|+++.+.. ...+..+.+.|+|+|.++.+..
T Consensus 106 ~~~D~vi~~~g----------------------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 106 YGVDVVLNSLA----------------------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp CCEEEEEECCC----------------------THHHHHHHHTEEEEEEEEECSC
T ss_pred CCCeEEEECCc----------------------hHHHHHHHHHhccCCEEEEEcC
Confidence 36999885421 1357788899999999987643
No 346
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.08 E-value=0.036 Score=48.23 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=63.9
Q ss_pred CCCCCcEEEEcCCC-CcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc------cCC-Cc--CCCC
Q 025039 56 IKPNSSVLELGCGN-SRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD------MLD-LP--FSND 124 (259)
Q Consensus 56 ~~~~~~vLDiGcG~-G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~-~~--~~~~ 124 (259)
+.++.+||-+|+|. |..+..+++... .+|++++.+++.++.+++. |.+ .++..+ +.+ +. ....
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----GAD--LTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----TCS--EEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----CCc--EEEeccccCcchHHHHHHHHhCCC
Confidence 66789999999876 778887777643 3999999999988887642 432 222211 111 10 1223
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+|+|+..... ...+..+.++|+++|.++.+..
T Consensus 267 g~Dvvid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 267 GADFILEATGD---------------------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp CEEEEEECSSC---------------------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCcEEEECCCC---------------------HHHHHHHHHHHhcCCEEEEEec
Confidence 69999854211 1357778899999999998654
No 347
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.01 E-value=0.051 Score=46.38 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=61.5
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCC-eEEEEcccCC-Cc--CCCCceeE
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLD-LP--FSNDCFDV 128 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~-~~--~~~~~fD~ 128 (259)
.+.++.+||-+|+|. |.++..+++ .+..+|+++|.+++.++.+++. +.+. +.....|..+ +. .....+|.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~~~i~~~~~~~~~~v~~~t~g~g~d~ 235 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GADVTINSGDVNPVDEIKKITGGLGVQS 235 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCSEEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCeEEEeCCCCCHHHHhhhhcCCCCceE
Confidence 457889999999987 455555554 4444999999999888777654 3221 1111222211 00 12335777
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
++....- ...+....+.|+++|.++++..
T Consensus 236 ~~~~~~~---------------------~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 236 AIVCAVA---------------------RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEECCSC---------------------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEeccC---------------------cchhheeheeecCCceEEEEec
Confidence 6642211 2567888899999999988654
No 348
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.93 E-value=0.048 Score=46.64 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=61.8
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
.+.++.+||-.|+ |. |..+..+++. |. +|++++.+++.++.+++. +.+ .++..+ .++. .....
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga~--~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----GAD--IVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS--EEEESS-TTHHHHHHHHTTTSC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc--EEecCc-hhHHHHHHHHhCCCC
Confidence 4568899999998 43 7777777765 55 999999999888877763 322 222222 1111 12336
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+....- ..+..+.+.|+++|.++++..
T Consensus 228 ~Dvvid~~g~----------------------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 228 VDMVVDPIGG----------------------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEEEESCC------------------------CHHHHHHTEEEEEEEEEC--
T ss_pred ceEEEECCch----------------------hHHHHHHHhhcCCCEEEEEEc
Confidence 9999864221 246778899999999998654
No 349
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.92 E-value=0.064 Score=46.40 Aligned_cols=97 Identities=16% Similarity=0.239 Sum_probs=63.9
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc--CCCc-----CCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM--LDLP-----FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~-----~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++...- .++. ...+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GAT--DFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCC--EEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CCc--eEEeccccchhHHHHHHHHhCCC
Confidence 456889999999876 7777777775 443799999999888887643 332 2221110 0110 11236
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 178 (259)
+|+|+..... ...+..+.++|+++ |.++++..
T Consensus 263 ~D~vid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 263 VDFSLECVGN---------------------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp BSEEEECSCC---------------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCCC---------------------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 9998853211 24678888999999 99988654
No 350
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.91 E-value=0.064 Score=46.45 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=64.1
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc-----cCC-C-cCCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d-----~~~-~-~~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++... +.+ + ....+.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GAT--DCLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS--EEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc--EEEccccccchHHHHHHHHhCCC
Confidence 456889999999876 7788887776 443799999999888877643 332 222111 111 0 011237
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 178 (259)
+|+|+....- ...++.+.++|+++ |.++++..
T Consensus 266 ~Dvvid~~G~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 266 VDYSLDCAGT---------------------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp BSEEEESSCC---------------------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ccEEEECCCC---------------------HHHHHHHHHHhhcCCCEEEEECC
Confidence 9998853211 24678889999999 99987654
No 351
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.90 E-value=0.064 Score=45.59 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=62.2
Q ss_pred cCCCCCcEEEEcC-C-CCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-----cCCCCce
Q 025039 55 HIKPNSSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----PFSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~f 126 (259)
.+.++.+||-.|+ | .|..+..+++. |. +|++++.+++.++.+.+.+ +. . .++...-.+. ....+.+
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~---g~-~-~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEEL---GF-D-GAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT---CC-S-EEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CC-C-EEEECCCHHHHHHHHHhcCCCc
Confidence 4678899999998 3 37777776654 66 9999999998887773332 32 1 1221111111 0112469
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|+|+.... ...+..+.+.|+++|.++++..
T Consensus 220 d~vi~~~g----------------------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 220 DVFFDNVG----------------------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEEESSC----------------------HHHHHHHHTTEEEEEEEEECCC
T ss_pred eEEEECCC----------------------cchHHHHHHHHhhCCEEEEEee
Confidence 99885321 1367888899999999998643
No 352
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.89 E-value=0.078 Score=45.20 Aligned_cols=93 Identities=16% Similarity=0.235 Sum_probs=62.2
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-------CCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++ .+.+ .++ |..+.. .. +.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~~--d~~~~~~~~~~~~~~-~~ 230 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD--LVV--NPLKEDAAKFMKEKV-GG 230 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS--EEE--CTTTSCHHHHHHHHH-SS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC--EEe--cCCCccHHHHHHHHh-CC
Confidence 467889999999965 6666666654 55 99999999998887764 2322 122 222111 01 36
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+..... ...++.+.++|+++|.++.+..
T Consensus 231 ~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 231 VHAAVVTAVS---------------------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EEEEEESSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCC---------------------HHHHHHHHHHhhcCCEEEEecc
Confidence 8998853221 2467788899999999987654
No 353
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.81 E-value=0.082 Score=45.70 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=63.8
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc-----cCC-C-cCCCCc
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d-----~~~-~-~~~~~~ 125 (259)
.+.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. |.+ .++..+ +.+ + ....+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GAT--ECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS--EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc--eEecccccchhHHHHHHHHhCCC
Confidence 456889999999876 7777777775 443799999999888887642 332 222111 111 0 011237
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCC-cEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 178 (259)
+|+|+....- ...+..+.++|+++ |.++++..
T Consensus 262 ~D~vid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 262 VDFSFEVIGR---------------------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp BSEEEECSCC---------------------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred CcEEEECCCC---------------------HHHHHHHHHHhhcCCcEEEEecc
Confidence 9998853211 24677888999999 99988654
No 354
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.76 E-value=0.05 Score=46.45 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=60.9
Q ss_pred cCCCCCcEEEEcCCC--CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 55 HIKPNSSVLELGCGN--SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~--G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
.++++.+||-.|+|. |..+..+++. |. +|++++.+++.++.+++. +. . .++...-.+.. .....
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----ga-~-~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL----GA-A-YVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TC-S-EEEETTTSCHHHHHHHHTTTSC
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC----CC-c-EEEeCCcccHHHHHHHHhCCCC
Confidence 457889999999984 6777766664 66 999999999888888763 32 2 22221111110 12347
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+....- . .+....+.|+++|.++++..
T Consensus 214 ~Dvvid~~g~------------------~----~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 214 ADAAIDSIGG------------------P----DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEEESSCH------------------H----HHHHHHHTEEEEEEEEECCC
T ss_pred CcEEEECCCC------------------h----hHHHHHHHhcCCCEEEEEee
Confidence 9999864221 1 12334479999999998754
No 355
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.73 E-value=0.021 Score=48.06 Aligned_cols=70 Identities=16% Similarity=0.258 Sum_probs=43.1
Q ss_pred CeEEEEcccCC-Cc-CCCCceeEEEecceeeee--eeCCCCCCCC---CchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 108 EVKVLEADMLD-LP-FSNDCFDVVIEKATMEVL--FVNSGDPWNP---QPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 108 ~v~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~--~~~~~~~~~~---~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.+.++++|..+ +. +++++||+|++++++... +......+.. ..........++.++.++|+|||.+++..
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 46889999876 22 456899999999887432 1000000000 00011234567889999999999998864
No 356
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.71 E-value=0.042 Score=46.44 Aligned_cols=90 Identities=12% Similarity=0.231 Sum_probs=59.8
Q ss_pred cEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-cCCCCceeEEEecceee
Q 025039 61 SVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-PFSNDCFDVVIEKATME 136 (259)
Q Consensus 61 ~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~~~~~l~ 136 (259)
+||-.|+ |. |..+..+++. |. +|++++.+++.++.+++. |.+. .+-..+.... ....+.+|+|+...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~~-vi~~~~~~~~~~~~~~~~d~v~d~~--- 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL----GANR-ILSRDEFAESRPLEKQLWAGAIDTV--- 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH----TCSE-EEEGGGSSCCCSSCCCCEEEEEESS---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCCE-EEecCCHHHHHhhcCCCccEEEECC---
Confidence 4999998 44 8888888776 55 999999999888888763 4322 1111221111 12235789887521
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+ . ..+..+.+.|+|+|.++.+..
T Consensus 220 ---------------g--~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 ---------------G--D--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ---------------C--H--HHHHHHHHTEEEEEEEEECCC
T ss_pred ---------------C--c--HHHHHHHHHHhcCCEEEEEec
Confidence 1 1 278888999999999998754
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.65 E-value=0.095 Score=45.15 Aligned_cols=95 Identities=17% Similarity=0.179 Sum_probs=62.1
Q ss_pred cCCCCCcEEEEc-CCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC----c-CCCCce
Q 025039 55 HIKPNSSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----P-FSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~-~~~~~f 126 (259)
.++++.+||-.| +|. |..+..+++. |. +|++++.+++.++.+++ .+.+ .++..+-.++ . .....+
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD--RPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc--EEEecCChhHHHHHHHhcCCCC
Confidence 466889999999 344 7777777765 55 89999999888887765 2322 2222111111 0 112469
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|+|+.... . ..++.+.+.|+++|.++++..
T Consensus 233 D~vid~~g-----------------~-----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 233 DVVYESVG-----------------G-----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEECSC-----------------T-----HHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----------------H-----HHHHHHHHHHhcCCEEEEEeC
Confidence 99885321 1 467788899999999987653
No 358
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.52 E-value=0.025 Score=48.54 Aligned_cols=92 Identities=15% Similarity=0.288 Sum_probs=60.4
Q ss_pred CCCcEEEE-cCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc--ccCC-C-cCCCCceeEEE
Q 025039 58 PNSSVLEL-GCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA--DMLD-L-PFSNDCFDVVI 130 (259)
Q Consensus 58 ~~~~vLDi-GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~--d~~~-~-~~~~~~fD~V~ 130 (259)
++.+||-. |+|. |..+..+++. |. +|++++.+++.++.+++. |.+ .++.. ++.+ + ......+|+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM----GAD--IVLNHKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH----TCS--EEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc--EEEECCccHHHHHHHhCCCCccEEE
Confidence 78899999 5665 7777777765 55 999999999988888763 322 12211 1100 0 01234699988
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.... ....++.+.++|+++|.++.+.
T Consensus 223 d~~g---------------------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 223 CTFN---------------------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp ESSC---------------------HHHHHHHHHHHEEEEEEEEESS
T ss_pred ECCC---------------------chHHHHHHHHHhccCCEEEEEC
Confidence 5321 1346778889999999998653
No 359
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.42 E-value=0.16 Score=45.24 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=62.7
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-------------
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL------------- 119 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------------- 119 (259)
.+.++.+||-+|+ |. |..+..+++....++++++.+++.++.+++. |.+ .++...-.+.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE--AIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC--EEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc--EEEecCcCcccccccccccchHH
Confidence 4578899999998 54 7888877775333899999999888888653 322 1221110000
Q ss_pred --------c--CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 120 --------P--FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 120 --------~--~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
. .....+|+|+.... . ..+..+.++|+++|.++++..
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G--------------------~--~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPG--------------------R--ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSC--------------------H--HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCC--------------------c--hhHHHHHHHhhCCcEEEEEec
Confidence 0 12247999885321 1 467788889999999998643
No 360
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.41 E-value=0.078 Score=45.20 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=61.8
Q ss_pred cCCCCCcEEEEcC-C-CCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE-cccCCCc-----CCCCc
Q 025039 55 HIKPNSSVLELGC-G-NSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE-ADMLDLP-----FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-~d~~~~~-----~~~~~ 125 (259)
.+.++.+||..|| | .|..+..+++ .|. +|++++.+++.++.+++.+ +. . .++. .+..++. ...+.
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~---g~-~-~~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF---GF-D-DAFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS---CC-S-EEEETTSCSCSHHHHHHHCTTC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CC-c-eEEecCCHHHHHHHHHHHhCCC
Confidence 4567899999997 3 3777766665 466 8999999998888776432 32 1 1121 1111110 11246
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+.... . ..+..+.+.|+++|.++++..
T Consensus 226 ~d~vi~~~g--------------------~--~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 226 IDIYFENVG--------------------G--KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEEESSC--------------------H--HHHHHHHTTEEEEEEEEECCC
T ss_pred CcEEEECCC--------------------H--HHHHHHHHHHhcCCEEEEEcc
Confidence 999885421 1 367888899999999987643
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.32 E-value=0.014 Score=50.47 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=62.8
Q ss_pred ccCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccC-CC--cCCCCceeE
Q 025039 54 PHIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML-DL--PFSNDCFDV 128 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~--~~~~~~fD~ 128 (259)
..+.++.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++. |.+ .++...-. +. ... +.+|+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~v~~~~~~~~~~~~~~-~~~D~ 246 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM----GAD--HYIATLEEGDWGEKYF-DTFDL 246 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TCS--EEEEGGGTSCHHHHSC-SCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc----CCC--EEEcCcCchHHHHHhh-cCCCE
Confidence 3467889999999976 7777777764 66 899999998888887753 322 22221111 11 111 47999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|+...... ....++.+.++|+++|.++.+..
T Consensus 247 vid~~g~~-------------------~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 247 IVVCASSL-------------------TDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp EEECCSCS-------------------TTCCTTTGGGGEEEEEEEEECCC
T ss_pred EEECCCCC-------------------cHHHHHHHHHHhcCCCEEEEecC
Confidence 98642210 00235567789999999987654
No 362
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.21 E-value=0.11 Score=44.12 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=60.2
Q ss_pred cCCCCCcEEEEcCC--CCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-----cCCCCce
Q 025039 55 HIKPNSSVLELGCG--NSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----PFSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiGcG--~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~f 126 (259)
.+.++.+||..||+ .|..+..++. .|. +|+++|.+++.++.+++. +. ...+-..+..+. ....+.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~----g~-~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI----GF-DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT----TC-SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc----CC-cEEEecCCHHHHHHHHHHHhCCCC
Confidence 45678999999983 3666665555 466 999999999888877432 32 211111110111 0112469
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|+++.+.. . ..+..+.+.|++||.++++..
T Consensus 216 d~vi~~~g--------------------~--~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 216 DCYFDNVG--------------------G--EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEESSC--------------------H--HHHHHHHTTEEEEEEEEECCC
T ss_pred eEEEECCC--------------------h--HHHHHHHHHHhcCCEEEEEec
Confidence 99886432 1 247788899999999988653
No 363
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.13 E-value=0.39 Score=36.75 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=57.2
Q ss_pred CCcEEEEcCCC-Cc-chHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----C-CCCceeEEE
Q 025039 59 NSSVLELGCGN-SR-LSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----F-SNDCFDVVI 130 (259)
Q Consensus 59 ~~~vLDiGcG~-G~-~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~fD~V~ 130 (259)
+.+|+-+|||. |. ++..|.+. |. +|+++|.+++.++.+++. .+.+..+|..+.. . ....+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-------g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-------GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-------TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-------CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899999886 54 34455556 77 899999999887766542 3455666664421 1 234689888
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.... +......+ -...+.+.|++.++....+
T Consensus 111 ~~~~-----------------~~~~~~~~-~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 111 LAMP-----------------HHQGNQTA-LEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp ECCS-----------------SHHHHHHH-HHHHHHTTCCSEEEEEESS
T ss_pred EeCC-----------------ChHHHHHH-HHHHHHHCCCCEEEEEECC
Confidence 5321 11222223 3355566777887775443
No 364
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.06 E-value=0.17 Score=42.73 Aligned_cols=94 Identities=20% Similarity=0.186 Sum_probs=58.6
Q ss_pred ccCCCCCcEEEEc-CCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCC-CcCCCCceeEE
Q 025039 54 PHIKPNSSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LPFSNDCFDVV 129 (259)
Q Consensus 54 ~~~~~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V 129 (259)
..+.++.+||-+| +|. |..+..+++. |. ++++++ ++...+.+++ .|.+. ++..+-.+ +...-..+|+|
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~----lGa~~--~i~~~~~~~~~~~~~g~D~v 219 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKA----LGAEQ--CINYHEEDFLLAISTPVDAV 219 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHH----HTCSE--EEETTTSCHHHHCCSCEEEE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHH----cCCCE--EEeCCCcchhhhhccCCCEE
Confidence 3567899999997 665 8888888776 55 899887 5554665554 34322 22211111 11111468998
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+.... ...+..+.++|+++|.++.+.
T Consensus 220 ~d~~g----------------------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 220 IDLVG----------------------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EESSC----------------------HHHHHHHGGGEEEEEEEEECC
T ss_pred EECCC----------------------cHHHHHHHHhccCCCEEEEeC
Confidence 85321 022377889999999999764
No 365
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.98 E-value=0.035 Score=47.82 Aligned_cols=98 Identities=24% Similarity=0.302 Sum_probs=60.6
Q ss_pred cCC-CCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEe
Q 025039 55 HIK-PNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIE 131 (259)
Q Consensus 55 ~~~-~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 131 (259)
.+. ++.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++. .|.+.+ +...+...+....+.+|+|+.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~g~D~vid 250 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQD---LGADDY-VIGSDQAKMSELADSLDYVID 250 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTT---SCCSCE-EETTCHHHHHHSTTTEEEEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH---cCCcee-eccccHHHHHHhcCCCCEEEE
Confidence 455 889999999876 7777777665 66 899999998777766532 243221 111111011101136999885
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
...-. ..++...++|+++|.++.+..
T Consensus 251 ~~g~~---------------------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 251 TVPVH---------------------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCCSC---------------------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCCh---------------------HHHHHHHHHhccCCEEEEeCC
Confidence 42211 134567789999999988654
No 366
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.93 E-value=0.15 Score=43.49 Aligned_cols=97 Identities=20% Similarity=0.321 Sum_probs=62.4
Q ss_pred ccCCCCCcEEEEcCCC--CcchHHHHh-c-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-----cCCC-
Q 025039 54 PHIKPNSSVLELGCGN--SRLSEGLYN-D-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----PFSN- 123 (259)
Q Consensus 54 ~~~~~~~~vLDiGcG~--G~~~~~l~~-~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~- 123 (259)
..+.++.+||..|+|. |..+..+++ . |. +|+++|.+++.++.+++. +. ...+...+ .+. ....
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~----g~-~~~~~~~~-~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GA-DYVINASM-QDPLAEIRRITES 238 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TC-SEEEETTT-SCHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh----CC-CEEecCCC-ccHHHHHHHHhcC
Confidence 3466889999999984 555555554 4 66 899999999888877643 32 21111111 110 0111
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+.+|+|+....- ...++.+.++|+++|.++++..
T Consensus 239 ~~~d~vi~~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 239 KGVDAVIDLNNS---------------------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp SCEEEEEESCCC---------------------HHHHTTGGGGEEEEEEEEECCS
T ss_pred CCceEEEECCCC---------------------HHHHHHHHHHHhcCCEEEEECC
Confidence 479998864321 2467788899999999988654
No 367
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.92 E-value=0.14 Score=43.96 Aligned_cols=95 Identities=19% Similarity=0.208 Sum_probs=61.6
Q ss_pred cCCCCCcEEEEc-CCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CCCCce
Q 025039 55 HIKPNSSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCF 126 (259)
Q Consensus 55 ~~~~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~f 126 (259)
.++++.+||-.| +|. |..+..+++. |. +|++++.+++.++.+++. +.+ .++..+-.+.. .....+
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----GAK--RGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS--EEEETTTSCHHHHHHHHHSSCE
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCC--EEEeCCchHHHHHHHHHhCCCc
Confidence 456889999995 343 7777777665 55 899999999988888763 322 22221111110 113469
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
|+|+....- ..+....+.|+++|.++++..
T Consensus 237 Dvvid~~g~----------------------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 237 DIILDMIGA----------------------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEESCCG----------------------GGHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCCH----------------------HHHHHHHHHhccCCEEEEEEe
Confidence 998864321 256778889999999998654
No 368
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.89 E-value=0.17 Score=43.31 Aligned_cols=95 Identities=19% Similarity=0.221 Sum_probs=60.2
Q ss_pred cCCCCCcEEEEcC-C-CCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC----c--CCCCc
Q 025039 55 HIKPNSSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----P--FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~ 125 (259)
.+.++.+||-.|+ | .|..+..+++. |. +|++++.+++.++.+++. +.. .++..+-.+. . .....
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga~--~~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN----GAH--EVFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT----TCS--EEEETTSTTHHHHHHHHHCTTC
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHc----CCC--EEEeCCCchHHHHHHHHcCCCC
Confidence 4568899999997 3 36666666554 65 899999999888766542 321 1221111110 0 12236
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+|+.... . ..+....+.|+++|.++++..
T Consensus 240 ~D~vi~~~G--------------------~--~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 240 IDIIIEMLA--------------------N--VNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEEEEESCH--------------------H--HHHHHHHHHEEEEEEEEECCC
T ss_pred cEEEEECCC--------------------h--HHHHHHHHhccCCCEEEEEec
Confidence 999885321 1 246778899999999998653
No 369
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.83 E-value=0.63 Score=40.33 Aligned_cols=114 Identities=23% Similarity=0.211 Sum_probs=76.0
Q ss_pred ccccchHHHHhhcccCCCCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCC--eEEEEcccCC
Q 025039 41 WLKDYSHFRHLVQPHIKPNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLD 118 (259)
Q Consensus 41 w~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~ 118 (259)
|-...+.+.+.+... ..+.+||.++.+.|.++..++..++ +.+.=|--....++.|+..++++. +++... ...
T Consensus 22 ~da~d~~ll~~~~~~-~~~~~~~~~~d~~gal~~~~~~~~~---~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~ 96 (375)
T 4dcm_A 22 WEAADEYLLQQLDDT-EIRGPVLILNDAFGALSCALAEHKP---YSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD 96 (375)
T ss_dssp CCHHHHHHHHTTTTC-CCCSCEEEECCSSSHHHHHTGGGCC---EEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC
T ss_pred cchHHHHHHHhhhhc-cCCCCEEEECCCCCHHHHhhccCCc---eEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc
Confidence 444444444443332 2457899999999999998876543 344336556677778888888754 555422 222
Q ss_pred CcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 119 LPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 119 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
....+|+|+..-+ .........|..+...|+||+.+++..-
T Consensus 97 ---~~~~~~~v~~~lp----------------k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 97 ---YPQQPGVVLIKVP----------------KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp ---CCSSCSEEEEECC----------------SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred ---cccCCCEEEEEcC----------------CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 2357999885321 3557788899999999999999987654
No 370
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.80 E-value=0.2 Score=42.78 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=60.0
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCc
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~ 125 (259)
.+.++.+||-+|+ |. |..+..+++. |. +|+++ .+++.++.+++. +.+ . +. +-.+.. .....
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l----Ga~-~--i~-~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL----GAT-P--ID-ASREPEDYAAEHTAGQG 216 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH----TSE-E--EE-TTSCHHHHHHHHHTTSC
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc----CCC-E--ec-cCCCHHHHHHHHhcCCC
Confidence 4568899999994 44 7777777765 55 89999 888887777653 321 1 22 111111 12346
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+|+|+.... ...+..+.+.|+++|.++.+.
T Consensus 217 ~D~vid~~g----------------------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 217 FDLVYDTLG----------------------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEEESSC----------------------THHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEECCC----------------------cHHHHHHHHHHhcCCeEEEEc
Confidence 999885321 146778888999999999754
No 371
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.77 E-value=0.63 Score=33.80 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=45.1
Q ss_pred CCcEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEec
Q 025039 59 NSSVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 132 (259)
..+|+-+|||. |. ++..|.+.|. +|+++|.+++.++.+++. .+.++.+|..+.. .....+|+|+..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 45799999976 33 4445555677 899999999888776642 3567788876632 122468888753
No 372
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.77 E-value=0.66 Score=37.64 Aligned_cols=120 Identities=10% Similarity=0.155 Sum_probs=69.4
Q ss_pred CCCcEEEEcCC--CCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----C
Q 025039 58 PNSSVLELGCG--NSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----S 122 (259)
Q Consensus 58 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 122 (259)
.++++|-.|++ .|. ++..|++.|. +|+.++.++...+.+.+.....+-.++.++..|+.+.. + .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 46789999976 332 5566777788 89999988766666665555444335888889987742 0 1
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+.+|+++.+..+...-..........++... ....+++.+...++++|.++.+..
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 13689888764432100000000000011111 112356677788888899888653
No 373
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.69 E-value=0.3 Score=41.56 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=61.7
Q ss_pred cCCCCCcEEEEcC--CCCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--------CCC
Q 025039 55 HIKPNSSVLELGC--GNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSN 123 (259)
Q Consensus 55 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~~ 123 (259)
.+.++.+||..|+ |.|..+..+++. |. +|++++.+++.++.+++. +.. .++ |..+.. ...
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----ga~--~~~--d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL----GAD--ETV--NYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS--EEE--ETTSTTHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc----CCC--EEE--cCCcccHHHHHHHHhCC
Confidence 4567899999998 347777766664 66 999999999988887642 322 122 221110 122
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..+|+|+.... . ..++.+.+.|+++|.++.+..
T Consensus 234 ~~~d~vi~~~g-~---------------------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 234 KGADKVVDHTG-A---------------------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TCEEEEEESSC-S---------------------SSHHHHHHHEEEEEEEEESSC
T ss_pred CCceEEEECCC-H---------------------HHHHHHHHhhccCCEEEEEec
Confidence 46999986432 1 246778889999999987654
No 374
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.67 E-value=0.18 Score=43.15 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=59.7
Q ss_pred cCCCCCcEEEEcC-C-CCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-----c-CCCCc
Q 025039 55 HIKPNSSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~~ 125 (259)
.+.++.+||-.|+ | .|..+..++.. |. +|++++.+++.++.+++. +. . .++..+-.+. . .....
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----g~-~-~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL----GA-A-AGFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TC-S-EEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CC-c-EEEecCChHHHHHHHHHhcCCC
Confidence 4567899999984 3 36666666554 55 899999999888887543 32 1 1121111110 0 12246
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+++....- ..+....++|+++|.++++..
T Consensus 232 ~d~vi~~~G~----------------------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 232 VNLILDCIGG----------------------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEEESSCG----------------------GGHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCc----------------------hHHHHHHHhccCCCEEEEEec
Confidence 9998864321 145667889999999998654
No 375
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.64 E-value=0.067 Score=46.20 Aligned_cols=97 Identities=20% Similarity=0.274 Sum_probs=59.7
Q ss_pred cCC-CCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEc-ccCCCcCCCCceeEEE
Q 025039 55 HIK-PNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVI 130 (259)
Q Consensus 55 ~~~-~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~V~ 130 (259)
.+. ++.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++.+ |.+ .++.. +...+....+.+|+|+
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~l---Ga~--~v~~~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNF---GAD--SFLVSRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTS---CCS--EEEETTCHHHHHHTTTCEEEEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc---CCc--eEEeccCHHHHHHhhCCCCEEE
Confidence 355 789999999876 7777766665 55 8999999988777665332 322 22211 1001110113699998
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
...... ..++.+.++|+++|.++.+..
T Consensus 257 d~~g~~---------------------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 257 DTVSAV---------------------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ECCSSC---------------------CCSHHHHHHEEEEEEEEECCC
T ss_pred ECCCcH---------------------HHHHHHHHHHhcCCEEEEEcc
Confidence 642211 124566788999999987654
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.61 E-value=0.18 Score=43.40 Aligned_cols=89 Identities=20% Similarity=0.235 Sum_probs=57.6
Q ss_pred CCcEEEEcCCC-CcchHHHHh-cCCCeEEEeeCCH---HHHHHHHHHHhhcCCCCeEEEEcccCCCc--C--CCCceeEE
Q 025039 59 NSSVLELGCGN-SRLSEGLYN-DGITAITCIDLSA---VAVEKMQERLLLKGYKEVKVLEADMLDLP--F--SNDCFDVV 129 (259)
Q Consensus 59 ~~~vLDiGcG~-G~~~~~l~~-~~~~~v~~vD~s~---~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~--~~~~fD~V 129 (259)
+.+||-+|+|. |..+..+++ .|. +|++++.++ +.++.+++. +.+.+ ..+ ++. . ....+|+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~----ga~~v---~~~--~~~~~~~~~~~~~d~v 250 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET----KTNYY---NSS--NGYDKLKDSVGKFDVI 250 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH----TCEEE---ECT--TCSHHHHHHHCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh----CCcee---chH--HHHHHHHHhCCCCCEE
Confidence 89999999954 666666655 466 999999987 777766543 32112 111 111 0 01469998
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHH-HHHHhcccCCcEEEEEec
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAML-EGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~ 178 (259)
+..... ...+ +.+.+.|+++|.++++..
T Consensus 251 id~~g~---------------------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 251 IDATGA---------------------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EECCCC---------------------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred EECCCC---------------------hHHHHHHHHHHHhcCCEEEEEec
Confidence 864321 1245 788999999999988654
No 377
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.23 E-value=0.015 Score=49.80 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=60.7
Q ss_pred cCCCCCcEEEEcCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CCCCcee
Q 025039 55 HIKPNSSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCFD 127 (259)
Q Consensus 55 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD 127 (259)
.+ ++.+||-+|+|. |..+..+++. |..+|++++.+++.++.+++. . . .++..+-.++. .....+|
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~-~v~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D-RLVNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S-EEECTTTSCHHHHHHHHHSSCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H-hccCcCccCHHHHHHHhcCCCCC
Confidence 45 889999999965 7777777775 443899999998877666442 1 1 11211101100 0124699
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+....- ...++.+.++|+++|.++.+..
T Consensus 234 ~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 234 VLLEFSGN---------------------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEECSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCC---------------------HHHHHHHHHHHhcCCEEEEEec
Confidence 99853211 2457788899999999988654
No 378
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.05 E-value=0.61 Score=38.51 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=53.8
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-c--------C--CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P--------F--SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~--------~--~~ 123 (259)
.+++||-.|++.|. ++..|++.|. +|++++.++...+.+.+.+...+-.++.++..|+.+. . . ..
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 45678888876652 4555666787 8999999998887777776655544688889998775 2 0 11
Q ss_pred CceeEEEeccee
Q 025039 124 DCFDVVIEKATM 135 (259)
Q Consensus 124 ~~fD~V~~~~~l 135 (259)
+..|+++.+..+
T Consensus 90 g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 GKLDILVNNAGV 101 (311)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 468999877543
No 379
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.03 E-value=0.056 Score=45.28 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=59.3
Q ss_pred CCCCCcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc-CCCcCCCCceeEEEe
Q 025039 56 IKPNSSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LDLPFSNDCFDVVIE 131 (259)
Q Consensus 56 ~~~~~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~ 131 (259)
+.++.+||-.|+ |. |..+..+++. |. +|++++.+++.++.+++ .+.+ .++..+- .+....-..+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~--~~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGAE--EAATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTCS--EEEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCC--EEEECCcchhHHHHhcCceEEEE
Confidence 678899999998 43 7777777664 55 99999999888777754 2322 2222110 111000046899885
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..- ..++.+.+.|+++|.++.+..
T Consensus 196 -~g~----------------------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 196 -VRG----------------------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp -CSC----------------------TTHHHHHTTEEEEEEEEEC--
T ss_pred -CCH----------------------HHHHHHHHhhccCCEEEEEeC
Confidence 221 246778899999999987643
No 380
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.99 E-value=0.21 Score=42.65 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=61.3
Q ss_pred cCCCCCcEEEEcCC--CCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccC---CCc-----CCC
Q 025039 55 HIKPNSSVLELGCG--NSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML---DLP-----FSN 123 (259)
Q Consensus 55 ~~~~~~~vLDiGcG--~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~-----~~~ 123 (259)
.+.++.+||..|++ .|..+..++. .|. +|++++.+++.++.+++. +. . .++ |.. ++. ...
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~----g~-~-~~~--d~~~~~~~~~~~~~~~~ 236 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSI----GG-E-VFI--DFTKEKDIVGAVLKATD 236 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHT----TC-C-EEE--ETTTCSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHc----CC-c-eEE--ecCccHhHHHHHHHHhC
Confidence 45688999999983 3666666665 466 999999998877766542 32 1 122 322 110 111
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+.+|+|+..... ...++.+.+.|+++|.++.+..
T Consensus 237 ~~~D~vi~~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 237 GGAHGVINVSVS---------------------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp SCEEEEEECSSC---------------------HHHHHHHTTSEEEEEEEEECCC
T ss_pred CCCCEEEECCCc---------------------HHHHHHHHHHHhcCCEEEEEeC
Confidence 268998864321 2467888999999999987654
No 381
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.90 E-value=0.094 Score=44.42 Aligned_cols=96 Identities=18% Similarity=0.286 Sum_probs=60.8
Q ss_pred cCCCCC-cEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc-CC-C-cCCCCcee
Q 025039 55 HIKPNS-SVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LD-L-PFSNDCFD 127 (259)
Q Consensus 55 ~~~~~~-~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~-~-~~~~~~fD 127 (259)
.+.++. +||-.|+ |. |..+..+++. |. ++++++.+++.++.+++. |.+.+ +-..+. .+ . ......+|
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l----Ga~~v-~~~~~~~~~~~~~~~~~~~d 219 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL----GASEV-ISREDVYDGTLKALSKQQWQ 219 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH----TCSEE-EEHHHHCSSCCCSSCCCCEE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCcEE-EECCCchHHHHHHhhcCCcc
Confidence 355664 8999998 44 7777777664 66 899999988777777652 33221 111111 11 1 12234689
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+.... . ..+....+.|+++|.++++..
T Consensus 220 ~vid~~g--------------------~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 220 GAVDPVG--------------------G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEESCC--------------------T--HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCc--------------------H--HHHHHHHHhhcCCCEEEEEec
Confidence 9885321 1 257788899999999998654
No 382
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.87 E-value=0.088 Score=44.58 Aligned_cols=96 Identities=18% Similarity=0.320 Sum_probs=59.5
Q ss_pred cCCCCC-cEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc-CC-C-cCCCCcee
Q 025039 55 HIKPNS-SVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LD-L-PFSNDCFD 127 (259)
Q Consensus 55 ~~~~~~-~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~-~-~~~~~~fD 127 (259)
.+.++. +||-.|+ |. |..+..+++. |. ++++++.+++.++.+++ .|.+.+ +-..+. .+ . ......+|
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~~~~~~~d 218 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAKEV-LAREDVMAERIRPLDKQRWA 218 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCSEE-EECC---------CCSCCEE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCcEE-EecCCcHHHHHHHhcCCccc
Confidence 355664 8999997 44 7777777765 55 89999999887777764 243221 111111 01 1 11234689
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+.... . ..+..+.+.|+++|.++++..
T Consensus 219 ~vid~~g--------------------~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 219 AAVDPVG--------------------G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EEEECST--------------------T--TTHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCc--------------------H--HHHHHHHHhhccCCEEEEEee
Confidence 8875321 0 246778889999999998654
No 383
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.62 E-value=0.14 Score=50.02 Aligned_cols=72 Identities=19% Similarity=0.249 Sum_probs=52.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC---------------cC
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL---------------PF 121 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---------------~~ 121 (259)
...+++|+.||.|.++..+.++|. ..+.++|+++.+++.-+.++ ++..++..|+.++ .+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhhc
Confidence 345899999999999999999997 47889999999998887775 3455555554221 01
Q ss_pred -CCCceeEEEecce
Q 025039 122 -SNDCFDVVIEKAT 134 (259)
Q Consensus 122 -~~~~fD~V~~~~~ 134 (259)
..+.+|+|+...+
T Consensus 614 p~~~~vDll~GGpP 627 (1002)
T 3swr_A 614 PQKGDVEMLCGGPP 627 (1002)
T ss_dssp CCTTTCSEEEECCC
T ss_pred ccCCCeeEEEEcCC
Confidence 1346899987644
No 384
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.61 E-value=1.1 Score=36.41 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=55.2
Q ss_pred CCCcEEEEcCCC--C---cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CC
Q 025039 58 PNSSVLELGCGN--S---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FS 122 (259)
Q Consensus 58 ~~~~vLDiGcG~--G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~ 122 (259)
+++++|--|++. | ..+..|++.|. +|+.++.+++.++.+.+.+...+-..+.++..|+.+.. ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578899999643 3 25666777888 89999999988888888777665456788888887622 11
Q ss_pred CCceeEEEecce
Q 025039 123 NDCFDVVIEKAT 134 (259)
Q Consensus 123 ~~~fD~V~~~~~ 134 (259)
-+..|+++.+..
T Consensus 84 ~G~iD~lvnnAg 95 (256)
T 4fs3_A 84 VGNIDGVYHSIA 95 (256)
T ss_dssp HCCCSEEEECCC
T ss_pred hCCCCEEEeccc
Confidence 257898887644
No 385
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.56 E-value=0.97 Score=37.34 Aligned_cols=111 Identities=11% Similarity=0.077 Sum_probs=70.0
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CCCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 124 (259)
+++.+|--|++.|. .+..|++.|. +|+.+|.+++.++.+.+.+ + .++..+..|+.+.. ..-+
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---G-GGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C-TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57788888888763 5666777888 8999999998888776554 3 24667788887632 1125
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHH--------HHHHHHHHHhcccCCcEEEEEe
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTK--------VMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
..|+++.+...... ...+.-.++..+. .-.+.+.+.+.|+.+|.++.+.
T Consensus 103 ~iDiLVNNAG~~~~----~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 103 RIDVLFVNAGGGSM----LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CEEEEEECCCCCCC----CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCC----CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 78998877543221 1111111112111 1235566778888888887764
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.56 E-value=0.38 Score=42.54 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=61.9
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE--cccCC------------
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE--ADMLD------------ 118 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~--~d~~~------------ 118 (259)
.+.++.+||-.|+ |. |..+..+++....++++++.+++.++.+++. |.+. .+.. .+..+
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l----Ga~~-~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL----GCDL-VINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCCC-EEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCCE-EEecccccccccccccccccchh
Confidence 4678899999998 44 7777777765333899999999888877542 4322 1111 11100
Q ss_pred -------C-cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 119 -------L-PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 119 -------~-~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+ ......+|+|+.... . ..++...+.|+++|.++++..
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G--------------------~--~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTG--------------------R--VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSC--------------------H--HHHHHHHHHSCTTCEEEESCC
T ss_pred hhHHHHHHHHHhCCCceEEEECCC--------------------c--hHHHHHHHHHhcCCEEEEEec
Confidence 0 001246899885321 1 356778889999999998653
No 387
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.51 E-value=0.038 Score=47.93 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=57.2
Q ss_pred CCCCCcEEEEc-CCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc---CCCCceeEE
Q 025039 56 IKPNSSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVV 129 (259)
Q Consensus 56 ~~~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V 129 (259)
+.++.+||-.| +|. |..+..+++. |. +|++++ +++..+.+++ .|.+ .++..+-.+.. .....+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~--~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRK----LGAD--DVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS--EEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHH----cCCC--EEEECCchHHHHHHhhcCCCCEE
Confidence 56789999999 454 7777777765 55 899998 6666666543 3432 22221111110 112468998
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+....- ....+....+.|+++|.++.+.
T Consensus 253 id~~g~--------------------~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 253 LDNVGG--------------------STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EESSCT--------------------THHHHGGGGBCSSSCCEEEESC
T ss_pred EECCCC--------------------hhhhhHHHHHhhcCCcEEEEeC
Confidence 853211 1124567788999999998764
No 388
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.39 E-value=0.3 Score=42.56 Aligned_cols=53 Identities=13% Similarity=0.199 Sum_probs=37.3
Q ss_pred CCCcEEEEcCCCCcchHHHHhc-------CCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEE
Q 025039 58 PNSSVLELGCGNSRLSEGLYND-------GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVL 112 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~ 112 (259)
.+..|+|+|+|.|.++.-+.+. ... +++.||+|+...+.=++++... .++.+.
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--~~v~W~ 140 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--RNIHWH 140 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--SSEEEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--CCeEEe
Confidence 3457999999999998877643 122 7999999998887666655432 245554
No 389
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.32 E-value=0.37 Score=40.76 Aligned_cols=93 Identities=16% Similarity=0.192 Sum_probs=60.5
Q ss_pred cCCCCCcEEEEcC--CCCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc--------CCC
Q 025039 55 HIKPNSSVLELGC--GNSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSN 123 (259)
Q Consensus 55 ~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~~ 123 (259)
.+.++.+||-.|+ |.|..+..++. .|. +|++++.+++.++.+++. +. .. ++ |..+.. ...
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----g~-~~-~~--d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL----GC-HH-TI--NYSTQDFAEVVREITGG 212 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TC-SE-EE--ETTTSCHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC-CE-EE--ECCCHHHHHHHHHHhCC
Confidence 4568899999996 34666665555 466 999999999888877652 32 21 12 221110 112
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..+|+++....- ..++.+.++|+++|.++.+..
T Consensus 213 ~~~d~vi~~~g~----------------------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 213 KGVDVVYDSIGK----------------------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp CCEEEEEECSCT----------------------TTHHHHHHTEEEEEEEEECCC
T ss_pred CCCeEEEECCcH----------------------HHHHHHHHhhccCCEEEEEec
Confidence 368998854221 356788899999999987654
No 390
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.28 E-value=1.3 Score=32.59 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=58.3
Q ss_pred CCcEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCC-HHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEe
Q 025039 59 NSSVLELGCGN-SR-LSEGLYNDGITAITCIDLS-AVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 131 (259)
Q Consensus 59 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s-~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~ 131 (259)
..+|+-+|+|. |. ++..|.+.|. +|+++|.+ ++..+...+... ..+.++.+|..+.. ..-...|+|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 45788888865 33 3334455576 89999997 455555444322 24788888886522 12346888886
Q ss_pred cceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 132 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
... .......+....+.+.|...++....+
T Consensus 78 ~~~------------------~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 78 LSD------------------NDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp CSS------------------CHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred ecC------------------ChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 321 123344555566667777777765433
No 391
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.21 E-value=0.27 Score=41.48 Aligned_cols=95 Identities=19% Similarity=0.150 Sum_probs=60.7
Q ss_pred cCCCCCcEEEEcC-C-CCcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC----c--CCCCc
Q 025039 55 HIKPNSSVLELGC-G-NSRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----P--FSNDC 125 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~ 125 (259)
.+.++.+||-.|+ | .|..+..++. .|. +|++++.+++.++.+++. +. . .++..+-.+. . .....
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g~-~-~~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----GA-W-QVINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TC-S-EEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CC-C-EEEECCCccHHHHHHHHhCCCC
Confidence 4567899999994 3 3666665555 466 899999999888877652 32 2 1121111110 0 11236
Q ss_pred eeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 126 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 126 fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+++.+.. ...++.+.++|+++|.++++..
T Consensus 210 ~D~vi~~~g----------------------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG----------------------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC----------------------GGGHHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc----------------------hHHHHHHHHHhcCCCEEEEEec
Confidence 999886432 1357788899999999987654
No 392
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.20 E-value=1.6 Score=36.16 Aligned_cols=118 Identities=11% Similarity=0.149 Sum_probs=67.7
Q ss_pred CCCcEEEEcCCCC-----cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----C
Q 025039 58 PNSSVLELGCGNS-----RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----S 122 (259)
Q Consensus 58 ~~~~vLDiGcG~G-----~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 122 (259)
.++++|-.|++.| .++..|++.|. +|+.++.++...+.+++.....+ .+.++..|+.+.. + .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHh
Confidence 4678999998743 25566677787 89999998766665555444333 5778888887632 0 1
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+..|+++.+..+..........+...++.. .....+++.+.+.++.+|.++.+..
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 1468999876543210000000000001111 1122356667777888898887653
No 393
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.19 E-value=1.8 Score=30.78 Aligned_cols=67 Identities=19% Similarity=0.277 Sum_probs=41.3
Q ss_pred CCcEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEec
Q 025039 59 NSSVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 132 (259)
+.+|+-+|+|. |. ++..|.+.|. +|+++|.+++.++.+++.. .+.+..+|..+.. .....+|+|+..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc------CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 35789998865 33 3344555676 8999999988776655431 3455666654321 112468988864
No 394
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.18 E-value=0.64 Score=40.86 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=61.9
Q ss_pred CCcEEEEcCCC-Ccc-hHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEec
Q 025039 59 NSSVLELGCGN-SRL-SEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 132 (259)
..+|+-+|+|. |.. +..|.+.|. .|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|+|++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-------g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-------GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 46799999976 443 334445576 899999999999888742 3567888887632 223568888753
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
-. + ......+-...+.+.|+..++....
T Consensus 76 ~~-----------------~-~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 76 ID-----------------D-PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CS-----------------S-HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CC-----------------C-hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 21 1 2334445556677788878877543
No 395
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.17 E-value=0.097 Score=44.51 Aligned_cols=68 Identities=21% Similarity=0.300 Sum_probs=44.6
Q ss_pred CeEEEEcccCC-Cc-CCCCceeEEEecceeeeeeeCCCCCCCCC--chhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 108 EVKVLEADMLD-LP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQ--PETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 108 ~v~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
...++++|..+ +. +++++||+|++.+++..... ..|... .+-.......+.++.++|+|||.+++..-
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~---~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRK---KEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCS---CSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcc---cccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 46788898765 33 55789999999988743210 001000 01123567888999999999999998643
No 396
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.17 E-value=0.55 Score=39.64 Aligned_cols=91 Identities=15% Similarity=0.245 Sum_probs=59.3
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.+|.-||+|. +.++..+.+.|.. +|+++|.+++.++.+.+. |. +.....+..+. .-...|+|+..-+.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~--~~~~~~~~~~~--~~~~aDvVilavp~- 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI--IDEGTTSIAKV--EDFSPDFVMLSSPV- 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS--CSEEESCTTGG--GGGCCSEEEECSCG-
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CC--cchhcCCHHHH--hhccCCEEEEeCCH-
Confidence 6899999997 4566677777865 899999999888776542 32 11112233220 11357998854322
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
....++++++...++|+.+++-+
T Consensus 105 -----------------~~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 105 -----------------RTFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp -----------------GGHHHHHHHHHHHSCTTCEEEEC
T ss_pred -----------------HHHHHHHHHHhhccCCCcEEEEC
Confidence 23457788888899998866543
No 397
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.08 E-value=0.37 Score=41.20 Aligned_cols=95 Identities=13% Similarity=0.159 Sum_probs=60.9
Q ss_pred cCCCC--CcEEEEcC-C-CCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-------CC
Q 025039 55 HIKPN--SSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FS 122 (259)
Q Consensus 55 ~~~~~--~~vLDiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~ 122 (259)
.+.++ .+||-.|+ | .|..+..++.. |..+|++++.+++.++.+++.+ +. . .++ |..+.. ..
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~-~-~~~--d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GF-D-AAI--NYKKDNVAEQLRESC 227 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CC-S-EEE--ETTTSCHHHHHHHHC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CC-c-eEE--ecCchHHHHHHHHhc
Confidence 45678 99999998 3 36666666654 4438999999988777776532 32 1 112 221110 11
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+.+|+++.+.. ...+..+.++|+++|.++++..
T Consensus 228 ~~~~d~vi~~~G----------------------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 228 PAGVDVYFDNVG----------------------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp TTCEEEEEESCC----------------------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCEEEECCC----------------------HHHHHHHHHHhccCcEEEEECC
Confidence 126899885421 1467888899999999997643
No 398
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.93 E-value=1.5 Score=35.82 Aligned_cols=112 Identities=19% Similarity=0.236 Sum_probs=69.2
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCC------------HHHHHHHHHHHhhcCCCCeEEEEcccCCCc--
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLS------------AVAVEKMQERLLLKGYKEVKVLEADMLDLP-- 120 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 120 (259)
.++++|-.|++.|. ++..|++.|. +|+.+|.+ ...++.+...+...+ .++.++..|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHH
Confidence 46788888887653 5556677787 89999987 666776666655544 36788888887632
Q ss_pred ---C-----CCCceeEEEecceeeeeeeCCCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEe
Q 025039 121 ---F-----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 121 ---~-----~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+ ..+..|+++.+..+... . .....+... ....+++.+.+.|+.+|.++.+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~----~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPL----G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCC----C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcc----c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 11368999877543211 0 000111111 12235666777888888888764
No 399
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.87 E-value=0.98 Score=36.55 Aligned_cols=111 Identities=13% Similarity=0.174 Sum_probs=67.7
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CCCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++...+.+. .++.++..|+.+.. ...+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG----PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46788888887653 5556677788 89999999988777766542 35788888887632 0114
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEe
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
..|+++.+...... .......++... ....+++.+.+.++.+|.++.+.
T Consensus 82 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 82 AIDLLHINAGVSEL----EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SEEEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 68998876443211 000000011111 11235566777778888888764
No 400
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.82 E-value=1 Score=36.80 Aligned_cols=76 Identities=22% Similarity=0.310 Sum_probs=56.1
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CCCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 124 (259)
.++.+|--|++.|. .+..|++.|. +|+.+|.+++.++.+.+.+...+. ++..+..|+.+.. ..-+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 57778888877763 5566777788 899999999998888877776663 5777788887621 1235
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+..+
T Consensus 86 ~iDiLVNNAG~ 96 (255)
T 4g81_D 86 HVDILINNAGI 96 (255)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 78999987544
No 401
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.11 E-value=0.66 Score=39.30 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=66.2
Q ss_pred CCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc-------CC-C----------CeEEEEcccCC
Q 025039 59 NSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-------GY-K----------EVKVLEADMLD 118 (259)
Q Consensus 59 ~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~-~----------~v~~~~~d~~~ 118 (259)
..+|.-+|+|+ | ..+..++..|. +|+..|++++.++.+.+++... +. . .++. ..|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchHh
Confidence 46899999998 4 46667788888 8999999999988887655321 10 0 0111 112111
Q ss_pred CcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 119 LPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 119 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.-...|+|+- .. +++.+-.++++.++-++++|+.+|.-.+.+
T Consensus 84 ---a~~~ad~ViE-----av-----------~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 84 ---AVEGVVHIQE-----CV-----------PENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp ---HTTTEEEEEE-----CC-----------CSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred ---HhccCcEEee-----cc-----------ccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 0124677663 22 256678889999999999999988765544
No 402
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.78 E-value=0.94 Score=38.94 Aligned_cols=92 Identities=13% Similarity=0.202 Sum_probs=57.7
Q ss_pred CCCCcEEEEcCC--CCcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCC-----cCCCCceeE
Q 025039 57 KPNSSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----PFSNDCFDV 128 (259)
Q Consensus 57 ~~~~~vLDiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~ 128 (259)
.++.+||-+|++ .|..+..+++. |. +|+++. +++.++.+++. |.+ .++...-.++ ....+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSR----GAE--EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHT----TCS--EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHc----CCc--EEEECCCchHHHHHHHHccCCccE
Confidence 678999999993 48888888776 55 888885 77777766543 432 2222111111 012245999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcc-cCCcEEEEEe
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVL-KPDGLFISVS 177 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~ 177 (259)
|+..-.- ...+..+.+.| +++|.++.+.
T Consensus 235 v~d~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCITN---------------------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSCS---------------------HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCCc---------------------hHHHHHHHHHhhcCCCEEEEEe
Confidence 8853211 24567777788 6999998764
No 403
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.66 E-value=2.1 Score=35.37 Aligned_cols=92 Identities=17% Similarity=0.266 Sum_probs=57.3
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE--------c---ccCCCcCCCCce
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE--------A---DMLDLPFSNDCF 126 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~--------~---d~~~~~~~~~~f 126 (259)
.+|.-+|+|. | .++..|++.|. +|+++|.+++.++..++. + +.... . +..+....-...
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----G---LIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----C---EEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----C---EEEEeCCCeeEecceeecchhhcccCCCC
Confidence 4789999987 4 45556677777 899999999887776654 2 11111 0 111111001258
Q ss_pred eEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 127 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 127 D~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
|+|+..- ......++++.+...++|+..++.+.
T Consensus 76 d~vi~~v------------------~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 76 DLIIALT------------------KAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp SEEEECS------------------CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CEEEEEe------------------ccccHHHHHHHHHHhcCCCCEEEEec
Confidence 9888532 12356788888999999888776553
No 404
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.62 E-value=0.25 Score=46.44 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=61.9
Q ss_pred CCCcEEEEcCCCCcchHHHHhcC------------CC-eEEEeeC---CHHHHHHHHHH-----------Hhhc-----C
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDG------------IT-AITCIDL---SAVAVEKMQER-----------LLLK-----G 105 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~------------~~-~v~~vD~---s~~~~~~a~~~-----------~~~~-----~ 105 (259)
+..+|+|+|-|+|...+.+.+.. .. +++.+|. +.+.+..+-+. +... +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45689999999999877665531 11 6899998 44444433211 1111 1
Q ss_pred -----CC----CeEEEEcccCC-Cc-CC---CCceeEEEecceeeeeeeCCC--CCCCCCchhHHHHHHHHHHHHhcccC
Q 025039 106 -----YK----EVKVLEADMLD-LP-FS---NDCFDVVIEKATMEVLFVNSG--DPWNPQPETVTKVMAMLEGVHRVLKP 169 (259)
Q Consensus 106 -----~~----~v~~~~~d~~~-~~-~~---~~~fD~V~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~Lkp 169 (259)
++ .+++..+|+.+ ++ +. ...+|.++..+ + .... ..|. .+++..+.++++|
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~----f-~p~~np~~w~---------~~~~~~l~~~~~~ 203 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG----F-APAKNPDMWN---------EQLFNAMARMTRP 203 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS----S-CC--CCTTCS---------HHHHHHHHHHEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC----C-CCCCChhhhh---------HHHHHHHHHHhCC
Confidence 01 24566677754 22 21 35799988543 1 1111 1232 5789999999999
Q ss_pred CcEEEE
Q 025039 170 DGLFIS 175 (259)
Q Consensus 170 gG~l~~ 175 (259)
||.+..
T Consensus 204 g~~~~t 209 (689)
T 3pvc_A 204 GGTFST 209 (689)
T ss_dssp EEEEEE
T ss_pred CCEEEe
Confidence 998775
No 405
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.50 E-value=1.1 Score=36.34 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=67.3
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEe-eCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCI-DLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|+.+ +.++...+.+.+.+...+ ..+.++..|+.+.. + ..
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG-RSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT-SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46788888887753 5556677788 78877 667776666666655544 35788888887632 0 11
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+..|+++.+....... .......++... ....+++.+.+.++++|.++.+.
T Consensus 85 g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 85 GEIHGLVHVAGGLIAR---KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp CSEEEEEECCCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCccCCC---CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 3689988765321110 000111111111 12245666777777788888764
No 406
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.44 E-value=0.57 Score=34.79 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=54.3
Q ss_pred CCCCcEEEEcCCC-Ccc-hHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEE
Q 025039 57 KPNSSVLELGCGN-SRL-SEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVI 130 (259)
Q Consensus 57 ~~~~~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 130 (259)
.++.+|+-+|||. |.. +..|.+.|. +|+++|.+++.++.+++ .. ...++.+|..+.. .....+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TC---CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cC---CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 3578999999976 543 344455676 89999999865443321 11 3455566654311 1124689888
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..-.- ......+..+.+.+.+...++....
T Consensus 90 ~~~~~------------------~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 90 AFTND------------------DSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp ECSSC------------------HHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred EEeCC------------------cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 53211 2233444445555566666665443
No 407
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.27 E-value=2.5 Score=34.32 Aligned_cols=62 Identities=13% Similarity=0.075 Sum_probs=43.8
Q ss_pred CcEEEEcCCCCcchHHHH----hcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 60 SSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 60 ~~vLDiGcG~G~~~~~l~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
.+||-.|| |.++..++ +.|. +|++++-++...+.... .+++++.+|+.++. ...+|+|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-------CCCeEEEecccccc--cCCCCEEEECC
Confidence 57999996 66555554 4566 89999988765544332 25888899998865 45789988654
No 408
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.17 E-value=0.42 Score=40.88 Aligned_cols=95 Identities=12% Similarity=0.179 Sum_probs=53.4
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHH---HHHHHHHHHhhcCCCCeEEEEc------ccCCCcCC
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAV---AVEKMQERLLLKGYKEVKVLEA------DMLDLPFS 122 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~---~~~~a~~~~~~~~~~~v~~~~~------d~~~~~~~ 122 (259)
.+.++.+||-.|+ |. |..++.+++. |...+..++.++. ..+.++ ..|.+. ++.. ++.+....
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~~~~~~~ 237 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAEH--VITEEELRRPEMKNFFKD 237 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCSE--EEEHHHHHSGGGGGTTSS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCcE--EEecCcchHHHHHHHHhC
Confidence 4678899999997 44 8888888775 5524445555432 234443 334322 2221 11121111
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
...+|+|+..-. . . .+....++|+++|.++.+.
T Consensus 238 ~~~~Dvvid~~g-----------------~-~----~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 238 MPQPRLALNCVG-----------------G-K----SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SCCCSEEEESSC-----------------H-H----HHHHHHTTSCTTCEEEECC
T ss_pred CCCceEEEECCC-----------------c-H----HHHHHHHhhCCCCEEEEEe
Confidence 124899885321 0 1 1235679999999998864
No 409
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.97 E-value=2.3 Score=34.59 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=67.4
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeC-CHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDL-SAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|+.++. ++...+...+.+...+ .++.++..|+.+.. + ..
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888877653 4556677787 8888765 4556666666555544 36788888987632 0 11
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEec
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+..|+++.+...... +......++... ....+++.+.+.|+.+|.++.+..
T Consensus 95 g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSF----GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 368998876443211 100000111111 122356677788888998887654
No 410
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.94 E-value=2.1 Score=33.53 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=56.1
Q ss_pred cEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEecce
Q 025039 61 SVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEKAT 134 (259)
Q Consensus 61 ~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~~~ 134 (259)
+|+-+|+|. |. ++..|.+.|. .++++|.+++.++...+.. ++.++.+|..+.. ..-..+|+|++...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 577888765 32 3444455676 8999999998887655431 4677888887632 12246888886321
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
.......+..+.+.+.|...++..
T Consensus 75 ------------------~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 75 ------------------RDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp ------------------CHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred ------------------CcHHHHHHHHHHHHHcCCCeEEEE
Confidence 123344555556666666666653
No 411
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.93 E-value=2.2 Score=34.40 Aligned_cols=118 Identities=15% Similarity=0.147 Sum_probs=65.6
Q ss_pred CCCCcEEEEcCC-CCc----chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------C
Q 025039 57 KPNSSVLELGCG-NSR----LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------F 121 (259)
Q Consensus 57 ~~~~~vLDiGcG-~G~----~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~ 121 (259)
.++++||-.|++ +|. ++..|++.|. +|+.++.+....+.+++.....+ .+.++..|+.+.. .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHH
Confidence 357889999975 233 4445566687 89999888655555554444333 4677888887632 0
Q ss_pred CCCceeEEEecceeeeeeeCCCCCCC-CCchhHH--------HHHHHHHHHHhcccCCcEEEEEe
Q 025039 122 SNDCFDVVIEKATMEVLFVNSGDPWN-PQPETVT--------KVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 122 ~~~~fD~V~~~~~l~~~~~~~~~~~~-~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
..+..|+++.+..+.......+..+. ..++... ....+++.+.+.++++|.++.+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 12468999876543211000011111 1111111 11235566777777788888764
No 412
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.93 E-value=1.6 Score=36.88 Aligned_cols=97 Identities=13% Similarity=0.162 Sum_probs=63.0
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHh-------hcCC-C----------CeEEEEcccCCC
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLL-------LKGY-K----------EVKVLEADMLDL 119 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~~-~----------~v~~~~~d~~~~ 119 (259)
.+|--||+|. +.++..+++.|. +|++.|.+++.++.+.+++. ..|+ + ++++ ..|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHHH
Confidence 5788999997 456777788888 89999999999988876432 1121 0 1222 1222211
Q ss_pred cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 120 PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 120 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
-...|+|+..-+ +.......++.++...++|+.+++..+
T Consensus 85 ---v~~aDlVieavp----------------e~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 85 ---VEGVVHIQECVP----------------ENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp ---TTTEEEEEECCC----------------SCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred ---HhcCCEEEEecc----------------CCHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 135798885321 233456778899999999988766443
No 413
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.88 E-value=0.19 Score=43.46 Aligned_cols=101 Identities=17% Similarity=0.233 Sum_probs=55.4
Q ss_pred CCCcEEEEcCCC-CcchHHH-HhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 58 PNSSVLELGCGN-SRLSEGL-YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 58 ~~~~vLDiGcG~-G~~~~~l-~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
++.+|+-+|+|. |..+..+ ...|. +|+++|.++..++.+++.+ +. .+.....+..++...-..+|+|+.....
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~---g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVF---GG-RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TT-SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc---Cc-eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 458999999965 5444433 34466 9999999998877766533 21 2222211111111001358998864332
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
... ....-+.+...+.|++||.++.+..
T Consensus 240 ~~~---------------~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 240 PGA---------------KAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp ---------------------CCSCHHHHTTSCTTCEEEECC-
T ss_pred Ccc---------------ccchhHHHHHHHhhcCCCEEEEEec
Confidence 110 0111124667788999999886543
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.88 E-value=0.95 Score=37.71 Aligned_cols=90 Identities=18% Similarity=0.262 Sum_probs=56.6
Q ss_pred CCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 59 NSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 59 ~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
..+|.-||+|. | .++..|++.|. +|++.|.+++.++.+.+. +. .....+..+.. ...|+|+..-+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g~---~~~~~~~~e~~---~~aDvvi~~vp-- 73 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----GA---CGAAASAREFA---GVVDALVILVV-- 73 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TC---SEEESSSTTTT---TTCSEEEECCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----CC---ccccCCHHHHH---hcCCEEEEECC--
Confidence 35799999987 4 45666777787 899999999887776653 32 11123333321 34688885321
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHH---HHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAML---EGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~LkpgG~l~~~ 176 (259)
.......++ +.+...++||..++-.
T Consensus 74 ---------------~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 74 ---------------NAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp ---------------SHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred ---------------CHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 123344555 6667788888776644
No 415
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.83 E-value=2.3 Score=37.81 Aligned_cols=95 Identities=15% Similarity=0.277 Sum_probs=60.9
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh-------cC------CCC--eEEEEcccCCCcCC
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-------KG------YKE--VKVLEADMLDLPFS 122 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~------~~~--v~~~~~d~~~~~~~ 122 (259)
.+|.-||+|. | .++..++..|. +|+++|.+++.++.+++.... .+ ... ..+ ..|...
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~---- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE---- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG----
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH----
Confidence 5799999998 4 46667777787 899999999988887653221 00 001 222 333311
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
-...|+|+..-+ +.......++.++...++|+.+++..
T Consensus 112 ~~~aDlVIeaVp----------------e~~~~k~~v~~~l~~~~~~~~ii~sn 149 (463)
T 1zcj_A 112 LSTVDLVVEAVF----------------EDMNLKKKVFAELSALCKPGAFLCTN 149 (463)
T ss_dssp GTTCSEEEECCC----------------SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred HCCCCEEEEcCC----------------CCHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 135788885321 23344567888898999988877653
No 416
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.72 E-value=0.099 Score=44.94 Aligned_cols=95 Identities=12% Similarity=0.185 Sum_probs=54.9
Q ss_pred cCCCC-CcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHH----HHHHHHHHhhcCCCCeEEEEc------ccCC-C
Q 025039 55 HIKPN-SSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVA----VEKMQERLLLKGYKEVKVLEA------DMLD-L 119 (259)
Q Consensus 55 ~~~~~-~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~----~~~a~~~~~~~~~~~v~~~~~------d~~~-~ 119 (259)
.++++ .+||-.|+ |. |..+..+++. |. +++++.-++.. .+.++ ..|.+. ++.. ++.+ +
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~~~~i 235 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLK----ELGATQ--VITEDQNNSREFGPTI 235 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHH----HHTCSE--EEEHHHHHCGGGHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHH----hcCCeE--EEecCccchHHHHHHH
Confidence 46678 99999997 54 7788877775 55 77777644432 33333 334322 2221 2111 1
Q ss_pred c-C---CCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 120 P-F---SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 120 ~-~---~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
. . ....+|+|+.... . .... ...++|+++|.++.+..
T Consensus 236 ~~~t~~~~~g~Dvvid~~G--------------------~-~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 236 KEWIKQSGGEAKLALNCVG--------------------G-KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHHHHHHTCCEEEEEESSC--------------------H-HHHH-HHHHTSCTTCEEEECCC
T ss_pred HHHhhccCCCceEEEECCC--------------------c-hhHH-HHHHHhccCCEEEEecC
Confidence 0 1 1246999985321 0 1223 56799999999988653
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.37 E-value=1.9 Score=35.15 Aligned_cols=86 Identities=16% Similarity=0.234 Sum_probs=54.9
Q ss_pred cEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeeee
Q 025039 61 SVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 138 (259)
Q Consensus 61 ~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~ 138 (259)
+|.-+|||. | .++..+.+.|. +|+++|.+++.++.+.+ .+... .. ..+..+. ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~----~g~~~-~~-~~~~~~~----~~~D~vi~av----- 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVE----RQLVD-EA-GQDLSLL----QTAKIIFLCT----- 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTSCS-EE-ESCGGGG----TTCSEEEECS-----
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHh----CCCCc-cc-cCCHHHh----CCCCEEEEEC-----
Confidence 578899987 3 35556666777 89999999987776643 23211 11 2233222 3579988532
Q ss_pred eeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 139 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
.......+++.+...++++..++-
T Consensus 66 -------------~~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 66 -------------PIQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp -------------CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred -------------CHHHHHHHHHHHHhhCCCCCEEEE
Confidence 224556788888888988876653
No 418
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.29 E-value=1.4 Score=36.40 Aligned_cols=96 Identities=19% Similarity=0.257 Sum_probs=61.0
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc---------CC---------CCeEEEEcccCCC
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK---------GY---------KEVKVLEADMLDL 119 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------~~---------~~v~~~~~d~~~~ 119 (259)
.+|.-+|+|. | .++..++..|. +|+++|.+++.++.+.+.+... ++ .++.. ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788899987 3 45666677788 8999999999988887653211 00 01222 2222211
Q ss_pred cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 120 PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 120 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
-...|+|+..-+ +..+....+++++...++|+.+++-.
T Consensus 83 ---~~~aDlVi~av~----------------~~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 83 ---VKDADLVIEAVP----------------ESLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp ---TTTCSEEEECCC----------------SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---hccCCEEEEecc----------------CcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 135798885322 23346678889999999998876543
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.10 E-value=1.5 Score=35.34 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=64.3
Q ss_pred CCCcEEEEcCCCC---cchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CC-----C
Q 025039 58 PNSSVLELGCGNS---RLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----N 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G---~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 123 (259)
++++||-.|++.| .++..|++ .|. +|++++.++...+.+.+.+...+ .++.++..|+.+.. +. .
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3567777765543 23344555 676 89999999887777666655444 35788888887632 00 1
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+.+|+|+.+...... .....+.++.. .....+++.+.+.++++|.++++.
T Consensus 81 g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFK----VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCC----TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCccccc----CCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 368998876433211 00000000111 111235666777777778888764
No 420
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.97 E-value=2.5 Score=34.89 Aligned_cols=118 Identities=13% Similarity=0.157 Sum_probs=66.7
Q ss_pred CCCcEEEEcCCC--Cc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----C
Q 025039 58 PNSSVLELGCGN--SR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----S 122 (259)
Q Consensus 58 ~~~~vLDiGcG~--G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 122 (259)
.++++|-.|++. |. ++..|++.|. +|+.++.++...+.+.+.....+ .+.++..|+.+.. + .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999864 32 5566677788 89999998765555555444333 4677888887632 0 1
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
-+..|+++.+..+..........+....+.. .....+++.+.+.++.+|.++.+..
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 1468999876543210000000000000111 1122356667778888898887653
No 421
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.77 E-value=3.8 Score=33.33 Aligned_cols=114 Identities=13% Similarity=0.164 Sum_probs=67.1
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCC-HHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLS-AVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s-~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.. ....+...+.+...+ ..+.++..|+.+.. + ..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG-GRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999887753 5556677788 78888654 455665555555444 35778888887632 0 11
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+..|+++.+..+... .......++.. .....+++.+.+.|+++|.++.+.
T Consensus 108 g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 108 GGLDILVNSAGIWHS----APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp SCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 368998876543211 00000011111 112235666778888889888764
No 422
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.74 E-value=2.1 Score=35.38 Aligned_cols=115 Identities=12% Similarity=0.116 Sum_probs=66.6
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCC--HHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----C
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLS--AVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----S 122 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 122 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.+ +...+.+.+.+...+ .++.++..|+.+.. + .
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46788888887653 4556667788 89988876 344555555554444 35777888887632 0 1
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEe
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.+..|+++.+......... .....++.. .....+++.+.+.++.+|.++.+.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPE---IKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HTCCCEEEECCCCCCCCSS---GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCC---cccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1468998876543211000 000001111 112245667778888889988764
No 423
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.41 E-value=0.81 Score=42.76 Aligned_cols=105 Identities=13% Similarity=0.197 Sum_probs=62.2
Q ss_pred CCCcEEEEcCCCCcchHHHHhc------------CCC-eEEEeeC---CHHHHHHHHHH-----------HhhcC--CC-
Q 025039 58 PNSSVLELGCGNSRLSEGLYND------------GIT-AITCIDL---SAVAVEKMQER-----------LLLKG--YK- 107 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~------------~~~-~v~~vD~---s~~~~~~a~~~-----------~~~~~--~~- 107 (259)
+.-+|||+|-|+|.......+. ... +++++|. +++.+..+-.. +.... ++
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 3468999999999877765443 112 6899998 77766644331 11111 00
Q ss_pred -----------CeEEEEcccCC-Cc-CC---CCceeEEEecceeeeeeeCCC--CCCCCCchhHHHHHHHHHHHHhcccC
Q 025039 108 -----------EVKVLEADMLD-LP-FS---NDCFDVVIEKATMEVLFVNSG--DPWNPQPETVTKVMAMLEGVHRVLKP 169 (259)
Q Consensus 108 -----------~v~~~~~d~~~-~~-~~---~~~fD~V~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~Lkp 169 (259)
.+++..+|+.+ ++ +. ...||+|+..+ + .... ..| -.+++..+.++++|
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~----f-~p~~np~~w---------~~~~~~~l~~~~~~ 211 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG----F-APAKNPDMW---------TQNLFNAMARLARP 211 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC----S-CGGGCGGGS---------CHHHHHHHHHHEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC----C-CCcCChhhh---------hHHHHHHHHHHhCC
Confidence 13345566644 22 11 35799988533 2 1111 112 25789999999999
Q ss_pred CcEEEEE
Q 025039 170 DGLFISV 176 (259)
Q Consensus 170 gG~l~~~ 176 (259)
||.+...
T Consensus 212 g~~~~t~ 218 (676)
T 3ps9_A 212 GGTLATF 218 (676)
T ss_dssp EEEEEES
T ss_pred CCEEEec
Confidence 9998753
No 424
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.21 E-value=2 Score=36.00 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=59.9
Q ss_pred CCCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE-ccc-CCCcCCCCceeEEEecc
Q 025039 58 PNSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE-ADM-LDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 58 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-~d~-~~~~~~~~~fD~V~~~~ 133 (259)
...+|.-+|+|. | .++..|++.|. +|+.+ .+++.++..++.-.....+...+.. ... .+.. ....+|+|+..-
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEEEEc
Confidence 457899999997 4 56667777787 89999 8888887776541100001111110 000 0111 124689887532
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.- .....+++.+...++|+..++...-+
T Consensus 95 k~------------------~~~~~~l~~l~~~l~~~~~iv~~~nG 122 (318)
T 3hwr_A 95 KS------------------TDTQSAALAMKPALAKSALVLSLQNG 122 (318)
T ss_dssp CG------------------GGHHHHHHHHTTTSCTTCEEEEECSS
T ss_pred cc------------------ccHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 21 24578889999999999887766444
No 425
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.19 E-value=3.7 Score=33.75 Aligned_cols=115 Identities=13% Similarity=0.152 Sum_probs=66.2
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHH-HHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAV-AVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~-~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++. ..+.+.+.+...+ .++.++..|+.+.. + ..
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788988887653 5556677787 8999988754 4444444444444 35788888987632 0 11
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+..|+++.+....... ........+.. .....+++.+.+.|+.+|.++.+.
T Consensus 124 g~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCC---SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 3689988764321110 00000000111 112245667778888889888764
No 426
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.13 E-value=2.8 Score=34.45 Aligned_cols=85 Identities=18% Similarity=0.291 Sum_probs=55.4
Q ss_pred CcEEEEcC-CC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 60 SSVLELGC-GN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 60 ~~vLDiGc-G~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.+|.-+|+ |. | .++..+++.|. +|+++|.+++.++.+.+ .++ .. .+..+. -...|+|+..-.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~----~g~---~~--~~~~~~---~~~aDvVi~av~-- 76 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQG----MGI---PL--TDGDGW---IDEADVVVLALP-- 76 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHH----TTC---CC--CCSSGG---GGTCSEEEECSC--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHh----cCC---Cc--CCHHHH---hcCCCEEEEcCC--
Confidence 47999999 87 4 45566677777 89999999887776654 232 11 122221 135799885321
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
.....++++.+...++++..++-
T Consensus 77 ----------------~~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 77 ----------------DNIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp ----------------HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred ----------------chHHHHHHHHHHHhCCCCCEEEE
Confidence 23467888888888888775553
No 427
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.11 E-value=0.68 Score=39.44 Aligned_cols=94 Identities=16% Similarity=0.210 Sum_probs=53.7
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcc--cCC-C-cCCCCcee
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD--MLD-L-PFSNDCFD 127 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~-~-~~~~~~fD 127 (259)
.++++.+||-.|+ |. |..+..+++. |..+|++++ ++...+.++ .+.+ .++..+ +.+ + ....+.+|
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~--~~~~~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT--HLFDRNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS--EEEETTSCHHHHHHHHCTTCEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc--EEEcCCccHHHHHHHhcCCCce
Confidence 4678899999998 43 7777788775 333899888 554444443 2332 222211 111 0 01235799
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+....- ..+....++|+++|.++++..
T Consensus 211 vv~d~~g~----------------------~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 211 IVLDCLCG----------------------DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp EEEEECC-----------------------------CTTEEEEEEEEEEC-
T ss_pred EEEECCCc----------------------hhHHHHHHHhhcCCEEEEECC
Confidence 98853210 123678899999999998754
No 428
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.08 E-value=1.8 Score=35.26 Aligned_cols=75 Identities=20% Similarity=0.249 Sum_probs=56.7
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CCCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 124 (259)
+++.+|--|++.|. .+..+++.|. +|+.+|.+++.++.+.+.+...+ .++..+..|+.+.. ..-+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG-KEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47788888888764 5566777788 89999999999998888887766 36778888987632 1125
Q ss_pred ceeEEEecce
Q 025039 125 CFDVVIEKAT 134 (259)
Q Consensus 125 ~fD~V~~~~~ 134 (259)
..|+++.+..
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899987754
No 429
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=88.07 E-value=2.3 Score=34.58 Aligned_cols=114 Identities=19% Similarity=0.244 Sum_probs=66.2
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEe-eCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCI-DLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|+.+ .-++...+...+.+...+ ..+.++..|+.+.. + ..
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG-GKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888887753 5556677788 77776 445666666665555544 35778888887632 0 11
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+..|+++.+..+... .......++.. .....+++.+.+.++++|.++.+.
T Consensus 104 g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPL----TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp SCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 468998876543211 00000011111 112235666777788889888765
No 430
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.73 E-value=0.59 Score=39.80 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=54.2
Q ss_pred CC-CcEEEE-cCCC-CcchHHHHhc-CCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCcee
Q 025039 58 PN-SSVLEL-GCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDCFD 127 (259)
Q Consensus 58 ~~-~~vLDi-GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD 127 (259)
++ .+||-. |+|. |..+..+++. |. +|++++.+++.++.+++. |.+ .++..+-.++. .....+|
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga~--~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDI----GAA--HVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHH----TCS--EEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC--EEEECCcHHHHHHHHHHhcCCCCc
Confidence 44 455544 4443 6666666554 66 999999999888887653 322 22222111110 0113699
Q ss_pred EEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 128 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 128 ~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
+|+....- ..+..+.+.|+++|.++++..
T Consensus 236 ~vid~~g~----------------------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVTG----------------------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSCH----------------------HHHHHHHHHSCTTCEEEECCC
T ss_pred EEEECCCC----------------------hhHHHHHhhhcCCCEEEEEec
Confidence 98853211 224667889999999998753
No 431
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.66 E-value=0.16 Score=43.93 Aligned_cols=102 Identities=13% Similarity=0.184 Sum_probs=57.8
Q ss_pred CCcEEEEcCCC-CcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 59 NSSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 59 ~~~vLDiGcG~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
+.+|+-+|+|. |..+..++. .|. +|+++|.+++.++.+++.... .+.....+..++...-..+|+|+......
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS----RVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG----GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc----eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 48999999976 555544443 476 999999999888887765432 22222211111110012589988543221
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 180 (259)
.. +.| .-+.+...+.|+|||+++.+.+.+
T Consensus 242 ~~---------~~~------~li~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 242 GR---------RAP------ILVPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp TS---------SCC------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred CC---------CCC------eecCHHHHhhCCCCCEEEEEecCC
Confidence 00 000 001344567889999888765543
No 432
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.60 E-value=0.7 Score=41.62 Aligned_cols=91 Identities=11% Similarity=0.213 Sum_probs=56.7
Q ss_pred CCCCCcEEEEcCCC-CcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecc
Q 025039 56 IKPNSSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 56 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 133 (259)
..++.+|+-+|+|. |......++ .|. +|+++|.++...+.+++. |+ .+ .++.+. . ...|+|+...
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~----Ga---~~--~~l~e~-l--~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMME----GF---DV--VTVEEA-I--GDADIVVTAT 337 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TC---EE--CCHHHH-G--GGCSEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC---EE--ecHHHH-H--hCCCEEEECC
Confidence 45789999999987 655544444 466 999999999877666532 32 22 222221 1 3589988642
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHH-HHHHhcccCCcEEEEEecCC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAML-EGVHRVLKPDGLFISVSFGQ 180 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~~ 180 (259)
.-.. ++ ....+.|||||+++.+....
T Consensus 338 gt~~---------------------~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 338 GNKD---------------------IIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp SSSC---------------------SBCHHHHHHSCTTCEEEECSSSG
T ss_pred CCHH---------------------HHHHHHHHhcCCCcEEEEeCCCC
Confidence 1111 12 24567799999998765543
No 433
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.54 E-value=2.8 Score=34.23 Aligned_cols=89 Identities=18% Similarity=0.290 Sum_probs=54.9
Q ss_pred cEEEEcCCC-C-cchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCC-ceeEEEecceee
Q 025039 61 SVLELGCGN-S-RLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSND-CFDVVIEKATME 136 (259)
Q Consensus 61 ~vLDiGcG~-G-~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~-~fD~V~~~~~l~ 136 (259)
+|.-+|+|. | .++..+.+.|.. +|+++|.+++.++.+++ .+... .. ..+..+. -. ..|+|+..-+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~-~~-~~~~~~~---~~~~aDvVilavp-- 71 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID-EG-TTSIAKV---EDFSPDFVMLSSP-- 71 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS-EE-ESCGGGG---GGTCCSEEEECSC--
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCCcc-cc-cCCHHHH---hcCCCCEEEEcCC--
Confidence 688899987 4 345556666653 79999999988776653 23211 11 2222221 13 5799885322
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
......++.++...++++.+++.+
T Consensus 72 ----------------~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 72 ----------------VRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp ----------------HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ----------------HHHHHHHHHHHHhhCCCCcEEEEC
Confidence 234557788888889988866543
No 434
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=87.46 E-value=1 Score=45.40 Aligned_cols=53 Identities=23% Similarity=0.297 Sum_probs=42.4
Q ss_pred CCcEEEEcCCCCcchHHHHhcCC-CeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM 116 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 116 (259)
..+++|+.||.|.+...+..+|. ..+.++|+++.+++.-+.++ +...+...|+
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI 904 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDC 904 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCH
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccH
Confidence 46799999999999999999997 46889999999998887775 3444555543
No 435
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.41 E-value=2.8 Score=34.91 Aligned_cols=93 Identities=17% Similarity=0.247 Sum_probs=59.7
Q ss_pred CCcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 59 NSSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 59 ~~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.++|--||+|. +.++..++ .|. +|++.|.+++.++.+.+.+......++++ ..|... -...|+|+..-+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~-~~~~~~----~~~aDlVieavp-- 82 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEF-TTTLEK----VKDCDIVMEAVF-- 82 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEE-ESSCTT----GGGCSEEEECCC--
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEE-eCCHHH----HcCCCEEEEcCc--
Confidence 56899999997 45777788 888 89999999999998887621111112332 233322 235799885322
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
++......++.++..+ ||.++...
T Consensus 83 --------------e~~~vk~~l~~~l~~~--~~~Ilasn 106 (293)
T 1zej_A 83 --------------EDLNTKVEVLREVERL--TNAPLCSN 106 (293)
T ss_dssp --------------SCHHHHHHHHHHHHTT--CCSCEEEC
T ss_pred --------------CCHHHHHHHHHHHhcC--CCCEEEEE
Confidence 2334456677777665 77766543
No 436
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.36 E-value=0.14 Score=44.42 Aligned_cols=101 Identities=13% Similarity=0.215 Sum_probs=56.4
Q ss_pred CCCcEEEEcCCC-CcchHHHHh-cCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 58 PNSSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 58 ~~~~vLDiGcG~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
++.+|+-+|+|. |..+..++. .|. +|+++|.++..++.+++.+ +. .+.....+..++...-..+|+|+.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~---g~-~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEF---CG-RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TT-SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhc---CC-eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999976 554444443 466 8999999998887776543 21 2222111111111001257998863211
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
... ....-+.+...+.|+|||+++.+..
T Consensus 242 p~~---------------~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 242 PGA---------------KAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp TTS---------------CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCC---------------CCcceecHHHHhcCCCCcEEEEEec
Confidence 000 0000124566778999999887653
No 437
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.24 E-value=0.25 Score=40.50 Aligned_cols=67 Identities=12% Similarity=0.202 Sum_probs=39.9
Q ss_pred eEEEEcccCCC--cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 109 VKVLEADMLDL--PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 109 v~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
..++++|..+. .+++++||+|++.+++..-..+.. .+....+-.......+..+.++|+|+|.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d-~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWD-SFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGG-CCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCccccc-ccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45677776542 144678999999888743200000 00000011124567788889999999999886
No 438
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.21 E-value=3.9 Score=33.05 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=50.3
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCC-CCeEEEEcccCCCc------CCCCcee
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP------FSNDCFD 127 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~------~~~~~fD 127 (259)
.++++|-.|++.|. ++..+++.|. +|+.++.++..++.+.+.+...+. ..+.++..|+.+.. ..-+..|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 45678888876652 4556666787 899999998887777666554431 23667778876522 1124689
Q ss_pred EEEecce
Q 025039 128 VVIEKAT 134 (259)
Q Consensus 128 ~V~~~~~ 134 (259)
+++.+..
T Consensus 88 ~lv~nAg 94 (267)
T 3t4x_A 88 ILINNLG 94 (267)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9887644
No 439
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=86.94 E-value=0.73 Score=40.69 Aligned_cols=45 Identities=29% Similarity=0.502 Sum_probs=35.0
Q ss_pred CCcEEEEcCCCCcchHHHHhc----C--CCeEEEeeCCHHHHHHHHHHHhh
Q 025039 59 NSSVLELGCGNSRLSEGLYND----G--ITAITCIDLSAVAVEKMQERLLL 103 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~----~--~~~v~~vD~s~~~~~~a~~~~~~ 103 (259)
...|+|+|+|+|.++.-+++. + ..+++.||+|+...+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 468999999999988776543 2 22799999999888777776653
No 440
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.69 E-value=6.2 Score=35.08 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=60.7
Q ss_pred CCcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHH-HHHHH---HHhhcCC----------CCeEEEEcccCCCcCC
Q 025039 59 NSSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAV-EKMQE---RLLLKGY----------KEVKVLEADMLDLPFS 122 (259)
Q Consensus 59 ~~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~---~~~~~~~----------~~v~~~~~d~~~~~~~ 122 (259)
-.+|.-||+|. +.++..+++.|. +|++.|.+++.. +..++ ++...+. .++++ ..|...
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~a---- 127 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHK---- 127 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHH----
Confidence 36799999997 557778888888 999999998721 11111 1112221 12333 233321
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
-...|+|+..-+ ++......++.++...++|+.++...+.
T Consensus 128 l~~aDlVIeAVp----------------e~~~vk~~v~~~l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 128 LSNCDLIVESVI----------------EDMKLKKELFANLENICKSTCIFGTNTS 167 (460)
T ss_dssp CTTCSEEEECCC----------------SCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred HccCCEEEEcCC----------------CCHHHHHHHHHHHHhhCCCCCEEEecCC
Confidence 235798885321 2345567888999999999988865443
No 441
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.60 E-value=4.5 Score=38.34 Aligned_cols=98 Identities=16% Similarity=0.300 Sum_probs=66.5
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc-----------CC----CCeEEEEcccCCCcCC
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-----------GY----KEVKVLEADMLDLPFS 122 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------~~----~~v~~~~~d~~~~~~~ 122 (259)
.+|--+|+|+ +.++..++..|. .|+..|++++.++.+++.+... .. ..+.+ ..+..++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH---
Confidence 5899999998 456667777888 9999999999998887654321 00 01111 1222221
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
...|+|+-. + +++.+-.+++++++-.+++|+.+|.-.+.+
T Consensus 392 -~~aDlVIEA-----V-----------~E~l~iK~~vf~~le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 392 -STVDLVVEA-----V-----------FEDMNLKKKVFAELSALCKPGAFLCTNTSA 431 (742)
T ss_dssp -GSCSEEEEC-----C-----------CSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred -hhCCEEEEe-----c-----------cccHHHHHHHHHHHhhcCCCCceEEecCCc
Confidence 246777732 2 146678889999999999999988865543
No 442
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.40 E-value=2.6 Score=34.03 Aligned_cols=77 Identities=16% Similarity=0.230 Sum_probs=54.7
Q ss_pred CCCcEEEEcC-CCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGC-GNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGc-G~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|+ |.|. ++..|++.|. +|+.++.++..++.+.+.+...+-.++.++..|+.+.. + ..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 4678888887 5543 5556777787 89999999988888777775554346888999987632 0 11
Q ss_pred CceeEEEeccee
Q 025039 124 DCFDVVIEKATM 135 (259)
Q Consensus 124 ~~fD~V~~~~~l 135 (259)
+..|+++.+..+
T Consensus 100 g~id~li~~Ag~ 111 (266)
T 3o38_A 100 GRLDVLVNNAGL 111 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 368999876543
No 443
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.30 E-value=4.1 Score=32.86 Aligned_cols=91 Identities=13% Similarity=0.361 Sum_probs=56.8
Q ss_pred CCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 59 NSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 59 ~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
+.+|.-+|||. | .++..+++.|...|+++|.+++.++.+.+.. + +.. ..+..+.. ...|+|+..-+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~---g---~~~-~~~~~~~~---~~~Dvvi~av~-- 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV---E---AEY-TTDLAEVN---PYAKLYIVSLK-- 77 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT---T---CEE-ESCGGGSC---SCCSEEEECCC--
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---C---Cce-eCCHHHHh---cCCCEEEEecC--
Confidence 35799999986 4 3455566667623899999998877665542 2 222 22332221 35799885321
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.....++++.+...+++|..++-..
T Consensus 78 ----------------~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 78 ----------------DSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp ----------------HHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred ----------------HHHHHHHHHHHHhhcCCCcEEEECC
Confidence 1244678888888888877666543
No 444
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=85.99 E-value=4.7 Score=32.88 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=62.2
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHH-HHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAV-AVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~-~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|++++.++. ..+.+.+.+...+ .++.++..|+.+.. + ..
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC-CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678877776542 4445566677 8999988754 3444444444333 25777888886622 0 01
Q ss_pred CceeEEEecceeeeeeeCCCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEe
Q 025039 124 DCFDVVIEKATMEVLFVNSGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 124 ~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
+..|+++.+..+... +..+...++... ....+++.+.+.|+.+|.++.+.
T Consensus 106 g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSF----GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp SCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 368998876543211 000000111111 11234566677777788888764
No 445
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=85.96 E-value=0.7 Score=44.04 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=43.0
Q ss_pred CCcEEEEcCCCCcchHHHHhcC------CCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccC
Q 025039 59 NSSVLELGCGNSRLSEGLYNDG------ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML 117 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 117 (259)
..+|+|+-||.|.++.-+.+.| +..+.++|+++.+++.-+.|+ ++..+.+.|+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh-----p~~~~~~~di~ 271 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH-----PQTEVRNEKAD 271 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC-----TTSEEEESCHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC-----CCCceecCcHH
Confidence 4679999999999999988876 446789999999999888775 34566666654
No 446
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.81 E-value=0.53 Score=39.90 Aligned_cols=66 Identities=20% Similarity=0.350 Sum_probs=43.3
Q ss_pred eEEE-EcccCCC--cCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 109 VKVL-EADMLDL--PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 109 v~~~-~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..++ ++|..+. .+++++||+|+..+++..-.. .|.....-.......+.++.++|+|||.+++..-
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d----~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLA----DWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGG----GGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCC----CccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 5677 8888652 245678999999888753210 0100011224567888899999999999998643
No 447
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=85.73 E-value=2.5 Score=37.92 Aligned_cols=96 Identities=23% Similarity=0.319 Sum_probs=62.7
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh-------cCC----------CCeEEEEcccCCCc
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-------KGY----------KEVKVLEADMLDLP 120 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~----------~~v~~~~~d~~~~~ 120 (259)
.+|.-||+|. +.++..+++.|. +|++.|.+++.++.+.+.+.. .+. .++++ ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~-- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA-- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH--
Confidence 4688899997 456777788888 899999999999988764311 111 01222 223221
Q ss_pred CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 121 FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 121 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
-...|+|+..-+ ++......++.++...++|+.+++..+
T Consensus 82 --~~~aDlVIeAVp----------------e~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 82 --LAAADLVIEAAS----------------ERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp --GGGCSEEEECCC----------------CCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --hcCCCEEEEcCC----------------CcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 135788885321 233455788999999999988776533
No 448
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=85.58 E-value=3.1 Score=33.63 Aligned_cols=114 Identities=11% Similarity=0.181 Sum_probs=64.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCC---HHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLS---AVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F----- 121 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s---~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~----- 121 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.+ .+.++.+.+.+...+ .++.++..|+.+.. +
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46788888887653 4445556677 88887654 445555555555444 35778888887632 0
Q ss_pred CCCceeEEEecceeeeeeeCCCCCCCCCchhH--------HHHHHHHHHHHhcccCCcEEEEEe
Q 025039 122 SNDCFDVVIEKATMEVLFVNSGDPWNPQPETV--------TKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 122 ~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
..+..|+++.+..+... .......++.. .....+++.+.+.|+++|.++.+.
T Consensus 88 ~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLK----KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHCSEEEEEECCCCCCS----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 11468998876543211 00000011111 112235566677777888888764
No 449
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.43 E-value=3.5 Score=34.13 Aligned_cols=94 Identities=14% Similarity=0.227 Sum_probs=59.0
Q ss_pred CcEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHh-------hcCC---------------CCeEEEEcc
Q 025039 60 SSVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLL-------LKGY---------------KEVKVLEAD 115 (259)
Q Consensus 60 ~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~~---------------~~v~~~~~d 115 (259)
.+|.-+|+|. |. ++..+++.|. +|+++|.+++.++.+++.+. ..+. .++.+ ..|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-STD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-ESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-ecC
Confidence 5799999998 44 6777788887 89999999998887654322 1121 01222 122
Q ss_pred cCCCcCCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEE
Q 025039 116 MLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 174 (259)
Q Consensus 116 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 174 (259)
..+ . -...|+|+..-+ +.......++.++...++|+.+++
T Consensus 94 ~~~-~--~~~aD~Vi~avp----------------~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 AAS-V--VHSTDLVVEAIV----------------ENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHH-H--TTSCSEEEECCC----------------SCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred HHH-h--hcCCCEEEEcCc----------------CcHHHHHHHHHHHHhhCCCCeEEE
Confidence 221 1 135788885321 122345678888888898887654
No 450
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.41 E-value=1.6 Score=36.68 Aligned_cols=99 Identities=14% Similarity=0.151 Sum_probs=55.7
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHH-Hhhc--CCCCeEEEEccc-CCCcCCCCceeEEEecc
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQER-LLLK--GYKEVKVLEADM-LDLPFSNDCFDVVIEKA 133 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~-~~~~--~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~ 133 (259)
.+|+-+|+|. +.++..|++.|. +|+.++-++ .+..++. +... ......+..... .+.......+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav 79 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI 79 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence 4789999997 456666777777 899999876 2444432 1000 011222210111 11111113689988642
Q ss_pred eeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 134 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
... ....+++.+...++++..++.+.-+
T Consensus 80 K~~------------------~~~~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 80 KVV------------------EGADRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp CCC------------------TTCCHHHHHTTSCCTTCEEEEECSS
T ss_pred CCC------------------ChHHHHHHHHhhcCCCCEEEEeCCC
Confidence 221 2235788899999999887766443
No 451
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=85.29 E-value=8.8 Score=32.55 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=68.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcC-CC-eEEEeeCCHHHHHHHHHHHhhc-----------------------CCCCeEEE
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLK-----------------------GYKEVKVL 112 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~-~~-~v~~vD~s~~~~~~a~~~~~~~-----------------------~~~~v~~~ 112 (259)
+...|+-+|||.=.....+...+ .. .++=+|+ |+.++.=++.+... .-++...+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 45789999999877777676543 22 6777776 66655444443321 01346788
Q ss_pred EcccCCCc----------CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 113 EADMLDLP----------FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 113 ~~d~~~~~----------~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
..|+.+.. +.....-++++-+++-++ ..+....+|+.+.+... +|.+++.+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL-------------~~~~~~~ll~~ia~~f~-~~~~i~yE~ 230 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM-------------TPEQSANLLKWAANSFE-RAMFINYEQ 230 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS-------------CHHHHHHHHHHHHHHCS-SEEEEEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC-------------CHHHHHHHHHHHHHhCC-CceEEEEec
Confidence 88887621 223345577888888877 56788899999988774 555555554
No 452
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.86 E-value=4.9 Score=32.85 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=54.5
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCC-eEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceee
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 136 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 136 (259)
.+|.-||+|. | .++..+++.|.. +|+++|.+++.++.+.+ .+... . ...+..+. -...|+|+..-+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~-~-~~~~~~~~---~~~aDvVilavp-- 75 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD-E-ATADFKVF---AALADVIILAVP-- 75 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS-E-EESCTTTT---GGGCSEEEECSC--
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc-c-ccCCHHHh---hcCCCEEEEcCC--
Confidence 4789999997 3 455566666432 89999999987776654 23211 1 12233221 135798885322
Q ss_pred eeeeCCCCCCCCCchhHHHHHHHHHHHHhc-ccCCcEEE
Q 025039 137 VLFVNSGDPWNPQPETVTKVMAMLEGVHRV-LKPDGLFI 174 (259)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-LkpgG~l~ 174 (259)
......+++.+... ++++.+++
T Consensus 76 ----------------~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 76 ----------------IKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ----------------HHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ----------------HHHHHHHHHHHHhcCCCCCCEEE
Confidence 23446788888888 88876655
No 453
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=84.60 E-value=3.6 Score=33.58 Aligned_cols=85 Identities=14% Similarity=0.071 Sum_probs=52.9
Q ss_pred cEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeeee
Q 025039 61 SVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 138 (259)
Q Consensus 61 ~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~ 138 (259)
+|.-+|+|. |. ++..+++ |. +|+++|.+++..+.+.+. +. ... +..+. -...|+|+..-.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~----g~---~~~--~~~~~---~~~~D~vi~~v~---- 64 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEE----FG---SEA--VPLER---VAEARVIFTCLP---- 64 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHH----HC---CEE--CCGGG---GGGCSEEEECCS----
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHC----CC---ccc--CHHHH---HhCCCEEEEeCC----
Confidence 588899987 54 4556666 76 899999998877766543 22 111 11111 135798885321
Q ss_pred eeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 139 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
.......+++.+...+++|..++.+
T Consensus 65 -------------~~~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 65 -------------TTREVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp -------------SHHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred -------------ChHHHHHHHHHHHhhCCCCCEEEEC
Confidence 1223556778888888888766644
No 454
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.35 E-value=3.8 Score=35.05 Aligned_cols=95 Identities=12% Similarity=0.097 Sum_probs=60.1
Q ss_pred CCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc-CCCC------eEEEEcccCCCcCCCCceeEE
Q 025039 59 NSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-GYKE------VKVLEADMLDLPFSNDCFDVV 129 (259)
Q Consensus 59 ~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~------v~~~~~d~~~~~~~~~~fD~V 129 (259)
..+|.-+|+|. | .++..|++.|. +|+..|.+++.++..++.-... -.+. +.+ ..|..+. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHH---HhcCCEE
Confidence 45899999997 4 46667777777 8999999998888776642110 0111 221 1122110 1347888
Q ss_pred EecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 130 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
+..- ......++++.+...++|+..++.+
T Consensus 104 ilaV------------------p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 104 LIVV------------------PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EECC------------------CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EECC------------------CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7532 2246678899999999988876654
No 455
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.23 E-value=4.2 Score=32.78 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=54.1
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788988887763 5566677788 89999999988888877766555 36788888987632 0 124
Q ss_pred ceeEEEecc
Q 025039 125 CFDVVIEKA 133 (259)
Q Consensus 125 ~fD~V~~~~ 133 (259)
..|+++.+.
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 689988765
No 456
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.06 E-value=3.4 Score=32.96 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=53.5
Q ss_pred CCCcEEEEcCCCC---cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.| .++..|++.|. +|+.++.++..++.+.+.+...+ ..+.++..|+.+.. + ..+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678888888765 35566677787 89999999988888777766544 35778888887632 0 113
Q ss_pred ceeEEEecce
Q 025039 125 CFDVVIEKAT 134 (259)
Q Consensus 125 ~fD~V~~~~~ 134 (259)
..|+++.+..
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899887654
No 457
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.47 E-value=3.9 Score=33.84 Aligned_cols=76 Identities=17% Similarity=0.166 Sum_probs=54.8
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.+++||-.|++.|. ++..|++.|. +|++++.++..++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG-FDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 46789988888752 5556677787 89999999998888877776555 36788888987632 0 013
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+..+
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68998877543
No 458
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.21 E-value=3.6 Score=32.70 Aligned_cols=74 Identities=9% Similarity=0.124 Sum_probs=50.8
Q ss_pred CCCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc------CCCCcee
Q 025039 57 KPNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDCFD 127 (259)
Q Consensus 57 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD 127 (259)
.++++||-.|++.|. ++..|++.|. +|+.++.++..++...+.+. ..+.+...|+.+.. ...+..|
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 357788888887652 4556666787 89999999988777766553 35778888886622 1224689
Q ss_pred EEEeccee
Q 025039 128 VVIEKATM 135 (259)
Q Consensus 128 ~V~~~~~l 135 (259)
+++.+...
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 98876543
No 459
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.20 E-value=3.4 Score=33.36 Aligned_cols=77 Identities=18% Similarity=0.161 Sum_probs=53.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+-.++.++..|+.+.. + ..+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 45678877776642 4555666788 89999999988888777766554346888888987632 0 113
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+..+
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 460
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.88 E-value=2.5 Score=34.97 Aligned_cols=88 Identities=20% Similarity=0.316 Sum_probs=55.4
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
.+|.-+|||. | .++..+++.|. +|+++|.+++.++.+.+. + +.. ..+..+. -...|+|+..-+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~----g---~~~-~~~~~~~---~~~aDvvi~~vp--- 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA----G---ASA-ARSARDA---VQGADVVISMLP--- 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT----T---CEE-CSSHHHH---HTTCSEEEECCS---
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---CeE-cCCHHHH---HhCCCeEEEECC---
Confidence 4788999997 4 45666777787 899999999887766543 2 222 1122111 124688875321
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHH---HHHhcccCCcEEEEE
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLE---GVHRVLKPDGLFISV 176 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~LkpgG~l~~~ 176 (259)
.......++. .+...+++|..++-.
T Consensus 69 --------------~~~~~~~v~~~~~~~~~~l~~~~~vi~~ 96 (302)
T 2h78_A 69 --------------ASQHVEGLYLDDDGLLAHIAPGTLVLEC 96 (302)
T ss_dssp --------------CHHHHHHHHHSSSCGGGSSCSSCEEEEC
T ss_pred --------------CHHHHHHHHcCchhHHhcCCCCcEEEEC
Confidence 2234566666 677788888766543
No 461
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=82.80 E-value=10 Score=30.43 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=48.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcC-CCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..|++.|. +|++++.++...+.+.+.+.... -.++.++..|+.+.. + ..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 35678888876642 4455666787 89999999877666555443221 124777888887632 0 01
Q ss_pred CceeEEEecce
Q 025039 124 DCFDVVIEKAT 134 (259)
Q Consensus 124 ~~fD~V~~~~~ 134 (259)
+..|+++.+..
T Consensus 85 g~id~lv~~Ag 95 (267)
T 2gdz_A 85 GRLDILVNNAG 95 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 35799887654
No 462
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.77 E-value=1.9 Score=35.33 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=52.4
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcC---------CCCc
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---------SNDC 125 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~ 125 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++...+.+.+.+...+ ..+.++..|+.+... ..+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 46778888877653 4556667787 89999998877777766665544 367888888876420 1146
Q ss_pred eeEEEeccee
Q 025039 126 FDVVIEKATM 135 (259)
Q Consensus 126 fD~V~~~~~l 135 (259)
.|+++.+...
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8998876543
No 463
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.75 E-value=2.4 Score=34.10 Aligned_cols=76 Identities=12% Similarity=0.187 Sum_probs=54.1
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C----CCCc
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F----SNDC 125 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~----~~~~ 125 (259)
.++++|-.|++.|. ++..|++.|. +|++++.++..++.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 46778888887753 5556677788 89999999888887777766554 36788888987632 0 0147
Q ss_pred eeEEEeccee
Q 025039 126 FDVVIEKATM 135 (259)
Q Consensus 126 fD~V~~~~~l 135 (259)
.|+++.+..+
T Consensus 84 id~lv~nAg~ 93 (252)
T 3h7a_A 84 LEVTIFNVGA 93 (252)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEECCCc
Confidence 8998876543
No 464
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=82.66 E-value=1.3 Score=36.90 Aligned_cols=54 Identities=20% Similarity=0.172 Sum_probs=38.5
Q ss_pred CCCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCH------------------HHHHHHHHHHhhcCCCCeEEE
Q 025039 58 PNSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSA------------------VAVEKMQERLLLKGYKEVKVL 112 (259)
Q Consensus 58 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~------------------~~~~~a~~~~~~~~~~~v~~~ 112 (259)
...+||-+|||. | ..+..|+..|..+++.+|.+. .-.+.+++++...+ +.+.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-P~v~v~ 108 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-PDVLFE 108 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-TTSEEE
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-CCcEEE
Confidence 467999999996 4 466778888988999999765 44566667666655 344443
No 465
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=82.11 E-value=2.4 Score=35.10 Aligned_cols=88 Identities=16% Similarity=0.187 Sum_probs=57.0
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
.+|.-||+|. | .++..+++.|. +|++.|.+++.++.+.+. + +.+ ..+..+. -. .|+|+..-+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~----g---~~~-~~~~~~~---~~-aDvvi~~vp--- 79 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA----G---ATL-ADSVADV---AA-ADLIHITVL--- 79 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT----T---CEE-CSSHHHH---TT-SSEEEECCS---
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC----C---CEE-cCCHHHH---Hh-CCEEEEECC---
Confidence 5799999987 4 35666677777 899999998877766542 2 222 1222221 13 788875321
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
.......+++.+...+++|..++-..
T Consensus 80 --------------~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 80 --------------DDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp --------------SHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred --------------ChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 22455677888889999887776543
No 466
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.00 E-value=4.8 Score=28.61 Aligned_cols=66 Identities=17% Similarity=0.238 Sum_probs=39.0
Q ss_pred CCcEEEEcCCC-Cc-chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEec
Q 025039 59 NSSVLELGCGN-SR-LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEK 132 (259)
Q Consensus 59 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 132 (259)
..+|+-+|+|. |. ++..+.+.|. +|+++|.++..++.+++ . ...+..+|..+.. .....+|+|+..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~----~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYAS----Y---ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTT----T---CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----h---CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 45799999865 33 2334445566 89999999865543321 1 2355666664421 112468988864
No 467
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.73 E-value=1.7 Score=38.77 Aligned_cols=67 Identities=13% Similarity=0.215 Sum_probs=0.0
Q ss_pred CCcEEEEcCCC-CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----CCCCceeEEEe
Q 025039 59 NSSVLELGCGN-SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 131 (259)
Q Consensus 59 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~ 131 (259)
..+|+-+|||. |......+..-...|+.+|.+++.++.+.+.+ ++.++++|..+.. ..-+..|++++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
No 468
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=81.64 E-value=10 Score=32.73 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=60.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEecceeee
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 137 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 137 (259)
.+.+||.++-+-|.++..+... . +++.+.-|...... +..++++. .. ... .......||+|+..-+
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~----l~~~~~~~-~~-~~~---~~~~~~~~d~v~~~~P--- 110 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEGR-M-AVERLETSRAAFRC----LTASGLQA-RL-ALP---WEAAAGAYDLVVLALP--- 110 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBTT-B-EEEEEECBHHHHHH----HHHTTCCC-EE-CCG---GGSCTTCEEEEEEECC---
T ss_pred hCCcEEEecCCCCccccccCCC-C-ceEEEeCcHHHHHH----HHHcCCCc-cc-cCC---ccCCcCCCCEEEEECC---
Confidence 4578999999999888766422 3 67777656544443 44446533 22 111 1123467999885321
Q ss_pred eeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEec
Q 025039 138 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
...........|..+.+.|+|||.++++.-
T Consensus 111 -----------k~k~~~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 111 -----------AGRGTAYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp -----------GGGCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----------cchhHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 001224567889999999999999998763
No 469
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=81.60 E-value=9.4 Score=36.03 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=60.0
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh-------cC----------CCCeEEEEcccCCCc
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-------KG----------YKEVKVLEADMLDLP 120 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~----------~~~v~~~~~d~~~~~ 120 (259)
.+|--||+|. +.++..++..|. +|++.|.+++.++.+++.+.. .+ ..+++.. .|...
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~~~-- 388 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNY-PVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDYES-- 388 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTC-CEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSSGG--
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCHHH--
Confidence 4699999997 456677778888 899999999988876543211 11 0123322 23211
Q ss_pred CCCCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 121 FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 121 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
-...|+|+..-+ ++......++.++...++|+.++...
T Consensus 389 --~~~aDlVIeaVp----------------e~~~vk~~v~~~l~~~~~~~~Ilasn 426 (725)
T 2wtb_A 389 --FRDVDMVIEAVI----------------ENISLKQQIFADLEKYCPQHCILASN 426 (725)
T ss_dssp --GTTCSEEEECCC----------------SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred --HCCCCEEEEcCc----------------CCHHHHHHHHHHHHhhCCCCcEEEeC
Confidence 135788885321 23344567888899999988866543
No 470
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.52 E-value=4.2 Score=32.69 Aligned_cols=76 Identities=14% Similarity=0.209 Sum_probs=53.6
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|+.+|.++..++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46778888877653 4556667788 89999999988888777666554 36788888887632 0 113
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+...
T Consensus 89 ~id~lv~nAg~ 99 (256)
T 3gaf_A 89 KITVLVNNAGG 99 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 471
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=81.45 E-value=3.8 Score=34.54 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=55.6
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh--cC--CCC---eEEEEcccCCCcCCCCceeEEE
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLL--KG--YKE---VKVLEADMLDLPFSNDCFDVVI 130 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~--~~~---v~~~~~d~~~~~~~~~~fD~V~ 130 (259)
.+|.-+|+|. | .++..|++.|. +|+++|.+++.++..++.... .+ ... +.....+..+. ...+|+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~vi 80 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADVIL 80 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCEEE
Confidence 5799999987 4 35556666777 899999999887776654210 00 000 00011111110 13579887
Q ss_pred ecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 131 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
..-.- ....++++.+...++++..++..
T Consensus 81 ~~v~~------------------~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 81 IVVPA------------------IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp ECSCG------------------GGHHHHHHHHGGGCCTTCEEEES
T ss_pred EeCCc------------------hHHHHHHHHHHHhCCCCCEEEEc
Confidence 53221 12357788888899988766654
No 472
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=81.42 E-value=4.9 Score=32.77 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=53.2
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|++++.++..++.+.+.+...+ ..+.++..|+.+.. + ..+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG-HDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46789988887653 5556677788 89999999988888777766554 36888888887632 0 113
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+...
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 68998876543
No 473
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.40 E-value=3.9 Score=32.85 Aligned_cols=75 Identities=11% Similarity=0.171 Sum_probs=52.6
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+ ..+.++..|+.+.. + ..+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35678887776652 4556667787 89999999998888877776544 35788888987632 0 113
Q ss_pred ceeEEEecce
Q 025039 125 CFDVVIEKAT 134 (259)
Q Consensus 125 ~fD~V~~~~~ 134 (259)
..|+++.+..
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899887654
No 474
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=81.31 E-value=2.5 Score=35.26 Aligned_cols=92 Identities=15% Similarity=0.177 Sum_probs=53.8
Q ss_pred CcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE--ccc-------CCCcCCCCceeE
Q 025039 60 SSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE--ADM-------LDLPFSNDCFDV 128 (259)
Q Consensus 60 ~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~--~d~-------~~~~~~~~~fD~ 128 (259)
.+|+-+|+|. +.++..|++.|. +|+.++-++ .+..++ .+ +.+.. ++. ..-+.....+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~----~g---~~~~~~~g~~~~~~~~~~~~~~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRD--YEAIAG----NG---LKVFSINGDFTLPHVKGYRAPEEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTT--HHHHHH----TC---EEEEETTCCEEESCCCEESCHHHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCc--HHHHHh----CC---CEEEcCCCeEEEeeceeecCHHHcCCCCE
Confidence 4789999998 345666777777 899999876 243332 22 11111 000 000001136898
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
|+..-.. ....++++.+...++|+..++.+.-+
T Consensus 73 vilavk~------------------~~~~~~l~~l~~~l~~~~~iv~l~nG 105 (312)
T 3hn2_A 73 VLVGLKT------------------FANSRYEELIRPLVEEGTQILTLQNG 105 (312)
T ss_dssp EEECCCG------------------GGGGGHHHHHGGGCCTTCEEEECCSS
T ss_pred EEEecCC------------------CCcHHHHHHHHhhcCCCCEEEEecCC
Confidence 8853221 23357888999999999877765433
No 475
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.29 E-value=5.8 Score=31.98 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=53.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhh-cCCCCeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLL-KGYKEVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~v~~~~~d~~~~~-----~-----~~ 123 (259)
.++++|-.|++.|. ++..+++.|. +|+.++.++..++.+.+.+.. .+..++.++..|+.+.. + ..
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46788888887753 5556677788 899999999888877776654 33234788888887632 0 11
Q ss_pred CceeEEEeccee
Q 025039 124 DCFDVVIEKATM 135 (259)
Q Consensus 124 ~~fD~V~~~~~l 135 (259)
+..|+++.+..+
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468998876543
No 476
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.21 E-value=4 Score=32.86 Aligned_cols=76 Identities=12% Similarity=0.191 Sum_probs=52.7
Q ss_pred CCCcEEEEcCCCC---cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.+++||-.|++.| .++..|++.|. +|+.++.++..++...+.+...+ ..+.++..|+.+.. + ..+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4667888887654 24455566787 89999999988888777766554 35788888887632 0 114
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+...
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68998876543
No 477
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=81.02 E-value=4 Score=33.31 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=49.6
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CC-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----ND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 124 (259)
.+.+||-.|++.|. ++..+++.|. +|++++.++..++...+.+...+...+.++..|+.+.. +. .+
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 35678888876542 3445566687 89999999888877666555444335778888887632 00 13
Q ss_pred ceeEEEec
Q 025039 125 CFDVVIEK 132 (259)
Q Consensus 125 ~fD~V~~~ 132 (259)
.+|+++.+
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68998876
No 478
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.88 E-value=5.7 Score=32.47 Aligned_cols=76 Identities=24% Similarity=0.383 Sum_probs=53.6
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
+++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+ ..+.++..|+.+.. + ..+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46678888887653 4556667788 89999999988888777766544 35778888887632 0 114
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+..+
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 479
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=80.69 E-value=3.2 Score=37.14 Aligned_cols=105 Identities=13% Similarity=0.197 Sum_probs=60.5
Q ss_pred CCCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc---CC----------CCeEEEEcccCCCcCC
Q 025039 58 PNSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK---GY----------KEVKVLEADMLDLPFS 122 (259)
Q Consensus 58 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~----------~~v~~~~~d~~~~~~~ 122 (259)
...+|.-+|+|. | .++..+++.|. +|+++|.+++.++..++..... ++ .++.+ ..|..+ .
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~---a 81 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEA---A 81 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHH---H
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHH---H
Confidence 457899999997 4 46667788888 8999999999888776531100 00 01222 111111 0
Q ss_pred CCceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEE
Q 025039 123 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 175 (259)
Q Consensus 123 ~~~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 175 (259)
-...|+|+..-+-. ....+ ..+.....++++.+.+.|+||..++.
T Consensus 82 ~~~aDvviiaVptp--~~~~~------~~dl~~v~~v~~~i~~~l~~~~iVV~ 126 (478)
T 2y0c_A 82 VAHGDVQFIAVGTP--PDEDG------SADLQYVLAAARNIGRYMTGFKVIVD 126 (478)
T ss_dssp HHHCSEEEECCCCC--BCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred hhcCCEEEEEeCCC--cccCC------CccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 12468877531100 00000 01235677888889999998776654
No 480
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=80.61 E-value=2.8 Score=37.19 Aligned_cols=104 Identities=13% Similarity=0.196 Sum_probs=59.0
Q ss_pred CcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc---C----------CCCeEEEEcccCCCcCCCC
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK---G----------YKEVKVLEADMLDLPFSND 124 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~----------~~~v~~~~~d~~~~~~~~~ 124 (259)
.+|.-+|+|. | .++..+++.|. +|+++|.+++.++..++..... + -.++.+. .|..+. -.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea---~~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA---VP 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH---GG
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH---Hh
Confidence 4688899987 3 45566777787 9999999999888776531100 0 0122221 222110 12
Q ss_pred ceeEEEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEE
Q 025039 125 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 176 (259)
Q Consensus 125 ~fD~V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 176 (259)
..|+|+..-+-.. ...+ ..+......+++.+.+.|++|..++..
T Consensus 78 ~aDvViiaVptp~--~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~ 121 (450)
T 3gg2_A 78 EADIIFIAVGTPA--GEDG------SADMSYVLDAARSIGRAMSRYILIVTK 121 (450)
T ss_dssp GCSEEEECCCCCB--CTTS------SBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred cCCEEEEEcCCCc--ccCC------CcChHHHHHHHHHHHhhCCCCCEEEEe
Confidence 4688775321100 0000 012246678888999999887766654
No 481
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=80.57 E-value=1.9 Score=36.98 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=57.3
Q ss_pred CCCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 58 PNSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 58 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
...+|.-||+|. | .++..|++.|. +|++.|.+++.++.+.+. ++ .. ..+..+........|+|+..-+-
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~----g~---~~-~~s~~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE----GI---AG-ARSIEEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----TC---BC-CSSHHHHHHHSCSSCEEEECSCG
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----CC---EE-eCCHHHHHhcCCCCCEEEEeCCH
Confidence 356899999987 4 45667777787 899999999877765532 21 11 11221111011235888753221
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
. ....+++.+...|++|.+++-..
T Consensus 92 ----------------~--~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 92 ----------------A--VVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp ----------------G--GHHHHHHHHGGGCCTTCEEEECS
T ss_pred ----------------H--HHHHHHHHHHhhCCCCCEEEeCC
Confidence 1 45677888999999887766543
No 482
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=80.34 E-value=4.4 Score=32.90 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=52.2
Q ss_pred CCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCCc
Q 025039 59 NSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 125 (259)
Q Consensus 59 ~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~~ 125 (259)
++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+ ..+.++..|+.+.. + ..+.
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5678888877653 4556666787 89999999988888877766554 35777788887632 0 1146
Q ss_pred eeEEEeccee
Q 025039 126 FDVVIEKATM 135 (259)
Q Consensus 126 fD~V~~~~~l 135 (259)
.|+++.+..+
T Consensus 82 iD~lVnnAG~ 91 (264)
T 3tfo_A 82 IDVLVNNAGV 91 (264)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8998876543
No 483
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.27 E-value=5.2 Score=31.71 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=52.4
Q ss_pred CCcEEEEcCCCC---cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CCCCc
Q 025039 59 NSSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSNDC 125 (259)
Q Consensus 59 ~~~vLDiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~~~ 125 (259)
++++|-.|++.| .++..|++.|. +|++++.++...+...+.+...+ ..+.++..|+.+.. ...+.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG-FKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567888887665 24556667787 89999999988888777766655 36888888887632 11246
Q ss_pred eeEEEecce
Q 025039 126 FDVVIEKAT 134 (259)
Q Consensus 126 fD~V~~~~~ 134 (259)
.|+++.+..
T Consensus 83 id~li~~Ag 91 (247)
T 3lyl_A 83 IDILVNNAG 91 (247)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899887654
No 484
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.17 E-value=2.5 Score=35.92 Aligned_cols=86 Identities=22% Similarity=0.212 Sum_probs=53.3
Q ss_pred CCcEEEEcCCC--CcchHHHHhcCCCeEEEeeCCHHH-HHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 59 NSSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVA-VEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 59 ~~~vLDiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~-~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
+.+|.-||+|. +.++..+.+.|. +|++.|.++.. .+.+++ .| +.+. +..+. . ...|+|+..-+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~~~~~~~a~~----~G---~~~~--~~~e~-~--~~aDvVilavp- 81 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGSATVAKAEA----HG---LKVA--DVKTA-V--AAADVVMILTP- 81 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHH----TT---CEEE--CHHHH-H--HTCSEEEECSC-
T ss_pred CCEEEEECchHHHHHHHHHHHHCcC-EEEEEECChHHHHHHHHH----CC---CEEc--cHHHH-H--hcCCEEEEeCC-
Confidence 45799999997 445566677777 78999987643 444432 23 2322 32221 1 24798885322
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHH-HHHhcccCCcEEEE
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLE-GVHRVLKPDGLFIS 175 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~ 175 (259)
......++. ++...++||..++.
T Consensus 82 -----------------~~~~~~v~~~~i~~~l~~~~ivi~ 105 (338)
T 1np3_A 82 -----------------DEFQGRLYKEEIEPNLKKGATLAF 105 (338)
T ss_dssp -----------------HHHHHHHHHHHTGGGCCTTCEEEE
T ss_pred -----------------cHHHHHHHHHHHHhhCCCCCEEEE
Confidence 234467777 88888988876663
No 485
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=79.79 E-value=5.8 Score=31.73 Aligned_cols=77 Identities=22% Similarity=0.358 Sum_probs=53.3
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhc--CCCCeEEEEcccCCCc-----C-----C
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLK--GYKEVKVLEADMLDLP-----F-----S 122 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~v~~~~~d~~~~~-----~-----~ 122 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+... +...+.++..|+.+.. + .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 45678888887653 5556677788 8999999998888877766544 2235778888887632 0 1
Q ss_pred CCceeEEEeccee
Q 025039 123 NDCFDVVIEKATM 135 (259)
Q Consensus 123 ~~~fD~V~~~~~l 135 (259)
.+..|+++.+..+
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468998876543
No 486
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=79.76 E-value=13 Score=29.75 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=41.3
Q ss_pred CCCcEEEEcCCC-Ccc----hHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CC
Q 025039 58 PNSSVLELGCGN-SRL----SEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FS 122 (259)
Q Consensus 58 ~~~~vLDiGcG~-G~~----~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~ 122 (259)
.++++|-.|++. |.+ +..|++.|. +|+.++.++...+.+++.....+ ...++..|+.+.. ..
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHH
Confidence 356788888762 444 444555677 89999887621122222111112 2356777876621 11
Q ss_pred CCceeEEEecce
Q 025039 123 NDCFDVVIEKAT 134 (259)
Q Consensus 123 ~~~fD~V~~~~~ 134 (259)
.+..|+++.+..
T Consensus 85 ~g~iD~lv~~Ag 96 (265)
T 1qsg_A 85 WPKFDGFVHSIG 96 (265)
T ss_dssp CSSEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 246899887654
No 487
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=79.66 E-value=6.7 Score=31.17 Aligned_cols=75 Identities=19% Similarity=0.258 Sum_probs=49.9
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CC-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----ND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 124 (259)
.+++||-.|++.|. ++..|++.|. +|++++.++...+...+.+...+ .++.++..|+.+.. +. .+
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678888876542 4445566777 89999999877766665554443 35788888887632 11 13
Q ss_pred ceeEEEecce
Q 025039 125 CFDVVIEKAT 134 (259)
Q Consensus 125 ~fD~V~~~~~ 134 (259)
.+|+|+.+..
T Consensus 90 ~id~vi~~Ag 99 (260)
T 3awd_A 90 RVDILVACAG 99 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899887644
No 488
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=79.65 E-value=2.8 Score=31.52 Aligned_cols=32 Identities=28% Similarity=0.287 Sum_probs=28.8
Q ss_pred CCCcEEEEcCCCCcchHHHHhcCCC-eEEEeeC
Q 025039 58 PNSSVLELGCGNSRLSEGLYNDGIT-AITCIDL 89 (259)
Q Consensus 58 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~ 89 (259)
-..-|||+|-|+|+.-.+|.+..+. +++++|-
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 4578999999999999999999887 8999995
No 489
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=79.64 E-value=1.8 Score=46.69 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=64.2
Q ss_pred cCCCCCcEEEEcC-CC-CcchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeE-EEEcccCC-C-c-CCCCceeE
Q 025039 55 HIKPNSSVLELGC-GN-SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVK-VLEADMLD-L-P-FSNDCFDV 128 (259)
Q Consensus 55 ~~~~~~~vLDiGc-G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~-~~~~d~~~-~-~-~~~~~fD~ 128 (259)
.++++.+||-.|+ |. |..++.+++....+|++++.+++..+.+++.+...+...+- ....++.+ + . .....+|+
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDv 1743 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDL 1743 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEE
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceE
Confidence 4678999999975 43 78888787763338999999998888887654323322211 11111111 0 1 12246999
Q ss_pred EEecceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 129 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 129 V~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
|+.... ...+....+.|+++|.++.+.
T Consensus 1744 Vld~~g----------------------~~~l~~~l~~L~~~Gr~V~iG 1770 (2512)
T 2vz8_A 1744 VLNSLA----------------------EEKLQASVRCLAQHGRFLEIG 1770 (2512)
T ss_dssp EEECCC----------------------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCC----------------------chHHHHHHHhcCCCcEEEEee
Confidence 985221 256888899999999998764
No 490
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=79.40 E-value=3.1 Score=34.41 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=53.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+...+.++..|+.+.. + ..+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 45678888876652 5556667788 89999999888887777766554346788888987632 0 114
Q ss_pred ceeEEEeccee
Q 025039 125 CFDVVIEKATM 135 (259)
Q Consensus 125 ~fD~V~~~~~l 135 (259)
..|+++.+..+
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 491
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=79.31 E-value=6.2 Score=31.95 Aligned_cols=74 Identities=20% Similarity=0.371 Sum_probs=48.6
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----CCCCceeEE
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCFDVV 129 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~V 129 (259)
.++.+|--|++.|. .+..|++.|. +|+.+|.+.. +.+.+.+...+ .++..+..|+.+.. +..+..|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDG-GNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTT-CCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhC-CcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 57788888887764 5667777888 8998988742 22333334444 35777888886632 344678998
Q ss_pred Eeccee
Q 025039 130 IEKATM 135 (259)
Q Consensus 130 ~~~~~l 135 (259)
+.+..+
T Consensus 84 VNNAGi 89 (247)
T 4hp8_A 84 VNNAGI 89 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 877543
No 492
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.28 E-value=6.9 Score=31.62 Aligned_cols=75 Identities=13% Similarity=0.116 Sum_probs=50.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc-----C-----CCC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 124 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 124 (259)
.+++||-.|++.|. ++..|++.|. +|++++.++..++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC-CeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 45788888876542 4445556677 89999999887777666655444 35788888887632 0 113
Q ss_pred ceeEEEecce
Q 025039 125 CFDVVIEKAT 134 (259)
Q Consensus 125 ~fD~V~~~~~ 134 (259)
.+|+|+.+..
T Consensus 108 ~iD~li~~Ag 117 (272)
T 1yb1_A 108 DVSILVNNAG 117 (272)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEECCC
Confidence 6899887654
No 493
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.26 E-value=5.2 Score=31.64 Aligned_cols=76 Identities=8% Similarity=0.192 Sum_probs=51.5
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEccc--CCCc----------CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM--LDLP----------FS 122 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~----------~~ 122 (259)
.++++|-.|++.|. ++..|++.|. +|+.++.++..++.+.+.+...+...+.+...|+ .+.. ..
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 46678888876642 4556666787 8999999999888888777666544567777766 3211 01
Q ss_pred CCceeEEEecce
Q 025039 123 NDCFDVVIEKAT 134 (259)
Q Consensus 123 ~~~fD~V~~~~~ 134 (259)
.+..|+++.+..
T Consensus 92 ~g~id~lv~nAg 103 (247)
T 3i1j_A 92 FGRLDGLLHNAS 103 (247)
T ss_dssp HSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 136899887654
No 494
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=79.17 E-value=1.5 Score=38.33 Aligned_cols=45 Identities=13% Similarity=-0.096 Sum_probs=38.0
Q ss_pred CCcEEEEcCCCCcchHHHHhcCC--Ce----EEEeeCCHHHHHHHHHHHhh
Q 025039 59 NSSVLELGCGNSRLSEGLYNDGI--TA----ITCIDLSAVAVEKMQERLLL 103 (259)
Q Consensus 59 ~~~vLDiGcG~G~~~~~l~~~~~--~~----v~~vD~s~~~~~~a~~~~~~ 103 (259)
..+|+|+.||.|.....+.+.|. .- |.++|+++.+++.-+.++..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 35899999999999999998883 24 78899999999988888753
No 495
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=79.03 E-value=4.6 Score=33.86 Aligned_cols=90 Identities=21% Similarity=0.306 Sum_probs=52.1
Q ss_pred CcEEEEcCCC-C-cchHHHHhcC-CCeEEEeeCCHHH---HHHHHHHHhhcCCCCeEEEEc-ccCCCcCCCCceeEEEec
Q 025039 60 SSVLELGCGN-S-RLSEGLYNDG-ITAITCIDLSAVA---VEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVIEK 132 (259)
Q Consensus 60 ~~vLDiGcG~-G-~~~~~l~~~~-~~~v~~vD~s~~~---~~~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~V~~~ 132 (259)
.+|.-||+|. | .++..|++.| . +|++.|.++.. .+...+.+...+ + .. +..+.. ...|+|+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~-~V~~~dr~~~~~~~~~~~~~~~~~~g---~---~~~s~~e~~---~~aDvVi~a 94 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAA-RLAAYDLRFNDPAASGALRARAAELG---V---EPLDDVAGI---ACADVVLSL 94 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCS-EEEEECGGGGCTTTHHHHHHHHHHTT---C---EEESSGGGG---GGCSEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHcCCC-eEEEEeCCCccccchHHHHHHHHHCC---C---CCCCHHHHH---hcCCEEEEe
Confidence 5799999987 4 4566677778 6 89999998721 111112222223 2 22 332221 346888753
Q ss_pred ceeeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEe
Q 025039 133 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 177 (259)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 177 (259)
-+- ....+.++.+...++||.+++-..
T Consensus 95 vp~------------------~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 95 VVG------------------AATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp CCG------------------GGHHHHHHHHGGGCCTTCEEEECC
T ss_pred cCC------------------HHHHHHHHHHHhhcCCCCEEEECC
Confidence 221 122345678888898887766543
No 496
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=78.99 E-value=7 Score=32.61 Aligned_cols=77 Identities=18% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCCcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCC-CeEEEEcccCCCc-----C-----CC
Q 025039 58 PNSSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLP-----F-----SN 123 (259)
Q Consensus 58 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-----~-----~~ 123 (259)
.+++||-.|++.|. ++..|++.|. +|++++.++..++.+.+.+...+.. .+.++..|+.+.. + ..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 45688988887653 5556666788 8999999998888877766554422 5788888887632 0 11
Q ss_pred CceeEEEeccee
Q 025039 124 DCFDVVIEKATM 135 (259)
Q Consensus 124 ~~fD~V~~~~~l 135 (259)
+..|+++.+..+
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999877543
No 497
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=78.96 E-value=4.5 Score=33.87 Aligned_cols=91 Identities=19% Similarity=0.305 Sum_probs=56.3
Q ss_pred CCCcEEEEcCCC-C-cchHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCcCCCCceeEEEeccee
Q 025039 58 PNSSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM 135 (259)
Q Consensus 58 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 135 (259)
...+|.-||+|. | .++..+++.|. +|++.|.+++.++.+.+. + +.+ ..+..+.. ...|+|+..-+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~----g---~~~-~~~~~e~~---~~aDvVi~~vp- 96 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL----G---ATI-HEQARAAA---RDADIVVSMLE- 96 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----T---CEE-ESSHHHHH---TTCSEEEECCS-
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---CEe-eCCHHHHH---hcCCEEEEECC-
Confidence 346899999997 4 35566777787 899999999877665432 2 222 12222211 24688875321
Q ss_pred eeeeeCCCCCCCCCchhHHHHHHHHH--HHHhcccCCcEEEEEe
Q 025039 136 EVLFVNSGDPWNPQPETVTKVMAMLE--GVHRVLKPDGLFISVS 177 (259)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~LkpgG~l~~~~ 177 (259)
.......++. .+...+++|..++-..
T Consensus 97 ----------------~~~~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 97 ----------------NGAVVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp ----------------SHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred ----------------CHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence 2234556665 6777788887776543
No 498
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=78.73 E-value=5.5 Score=32.17 Aligned_cols=116 Identities=13% Similarity=0.206 Sum_probs=60.7
Q ss_pred CCCcEEEEcC-CCCcchHH----HHhcCCCeEEEeeCCHHH-HHHHHHHHhhcCCCCeEEEEcccCCCc-----CC----
Q 025039 58 PNSSVLELGC-GNSRLSEG----LYNDGITAITCIDLSAVA-VEKMQERLLLKGYKEVKVLEADMLDLP-----FS---- 122 (259)
Q Consensus 58 ~~~~vLDiGc-G~G~~~~~----l~~~~~~~v~~vD~s~~~-~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~---- 122 (259)
.++++|-.|+ |+|.++.. |++.|. +|+.++.++.. ++...+. .+ .++.++..|+.+.. +.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDR---LP-AKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTT---SS-SCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHh---cC-CCceEEEccCCCHHHHHHHHHHHHH
Confidence 3578999998 35554444 455677 89999988643 3333322 12 24667788887632 00
Q ss_pred -CC---ceeEEEecceeeeeeeC-CCCCCCCCchhHH--------HHHHHHHHHHhcccCCcEEEEEec
Q 025039 123 -ND---CFDVVIEKATMEVLFVN-SGDPWNPQPETVT--------KVMAMLEGVHRVLKPDGLFISVSF 178 (259)
Q Consensus 123 -~~---~fD~V~~~~~l~~~~~~-~~~~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 178 (259)
.+ .+|+++.+......... ........++... ....+++.+.+.|+++|.++.+..
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 12 68999876543210000 0000000111111 112355666777777888887653
No 499
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=78.70 E-value=4.4 Score=33.49 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=52.4
Q ss_pred CCCcEEEEcCCC-CcchH-HHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEE-cccCCCcCCCCceeEEEecce
Q 025039 58 PNSSVLELGCGN-SRLSE-GLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE-ADMLDLPFSNDCFDVVIEKAT 134 (259)
Q Consensus 58 ~~~~vLDiGcG~-G~~~~-~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fD~V~~~~~ 134 (259)
++.+|+-+|+|. |.... .+...|. +|+++|.++...+.+.+ .+ +.... .++.+. -...|+|+..-+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~----~g---~~~~~~~~l~~~---l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAE----MG---MEPFHISKAAQE---LRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TT---SEEEEGGGHHHH---TTTCSEEEECCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----CC---CeecChhhHHHH---hcCCCEEEECCC
Confidence 578999999986 54333 3344566 99999999876554432 23 23221 122111 135899987544
Q ss_pred eeeeeeCCCCCCCCCchhHHHHHHHHHHHHhcccCCcEEEEEecC
Q 025039 135 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 179 (259)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 179 (259)
.+.+ + ......++||++++-+..+
T Consensus 223 ~~~i-------------~--------~~~l~~mk~~~~lin~ar~ 246 (293)
T 3d4o_A 223 ALVV-------------T--------ANVLAEMPSHTFVIDLASK 246 (293)
T ss_dssp SCCB-------------C--------HHHHHHSCTTCEEEECSST
T ss_pred hHHh-------------C--------HHHHHhcCCCCEEEEecCC
Confidence 4322 1 1234568999988765443
No 500
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=78.67 E-value=12 Score=30.37 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=48.1
Q ss_pred CcEEEEcCCCCc---chHHHHhcCCCeEEEeeCCHHHHHHHHHHHhhcCCCCeEEEEcccCCCc----------CCCCce
Q 025039 60 SSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSNDCF 126 (259)
Q Consensus 60 ~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~~~f 126 (259)
+++|-.|++.|. ++..|++.|. +|++++.++..++...+.+... .++.++..|+.+.. ..-+..
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 568877776552 4455666787 8999999988777766655432 35778888887621 112467
Q ss_pred eEEEecce
Q 025039 127 DVVIEKAT 134 (259)
Q Consensus 127 D~V~~~~~ 134 (259)
|+++.+..
T Consensus 99 D~lvnnAG 106 (272)
T 2nwq_A 99 RGLINNAG 106 (272)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
Done!