BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025041
(259 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255536995|ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis]
gi|223549463|gb|EEF50951.1| thymidylate kinase, putative [Ricinus communis]
Length = 264
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/261 (72%), Positives = 213/261 (81%), Gaps = 4/261 (1%)
Query: 1 MTHACSFTLSKALNFGALFVRRS-KFHLNCLPKCSCTPFRMES---SSSLRIGNIDSRGA 56
MT+AC+ + KAL FGA RRS HLN K S RMES + +LR+ N +SRGA
Sbjct: 1 MTYACALKVPKALTFGASAARRSLNAHLNYPGKSSIRSIRMESDISTGNLRVENCESRGA 60
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+VLEGLDR GKTSQC +L+SYLE LGH ELWRFPDRTT++GQMISAYLSNQS LDD T
Sbjct: 61 FIVLEGLDRSGKTSQCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLSNQSQLDDRT 120
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IHLL+SANRWEK S+ME KLK+GTTLIVDRYSYSGVAFS+AKG+D EWCKAPEIGLLAPD
Sbjct: 121 IHLLYSANRWEKNSLMETKLKSGTTLIVDRYSYSGVAFSAAKGLDFEWCKAPEIGLLAPD 180
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQL 236
VLYLDIPPEKAAERGGYGGERYE LEFQ KV CYQ LRDSSW+IIDA Q +E+V+KQ+
Sbjct: 181 LVLYLDIPPEKAAERGGYGGERYEKLEFQMKVGNCYQTLRDSSWEIIDASQPMEEVQKQI 240
Query: 237 KEIVLDQVTACKKGKPFSLLW 257
+EIVLD V A +KGKP S LW
Sbjct: 241 QEIVLDHVLASEKGKPLSHLW 261
>gi|224055681|ref|XP_002298600.1| predicted protein [Populus trichocarpa]
gi|222845858|gb|EEE83405.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/221 (81%), Positives = 200/221 (90%), Gaps = 2/221 (0%)
Query: 40 MESSSS--LRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTS 97
MESSS+ LR + +SRGAL+VLEGLDR GKTSQ SRLLSYLEGLGHS ELWRFPDR+TS
Sbjct: 1 MESSSNCNLRASSSESRGALIVLEGLDRSGKTSQSSRLLSYLEGLGHSTELWRFPDRSTS 60
Query: 98 VGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA 157
VGQMISAYLSN+SHLDD TIHLLFSANRWEKRS+ME +LK GTTL+VDRYSYSGVAFSSA
Sbjct: 61 VGQMISAYLSNKSHLDDRTIHLLFSANRWEKRSLMETQLKNGTTLVVDRYSYSGVAFSSA 120
Query: 158 KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
KG+DIEWCKAPE+GLLAPD VLYLDIPPEKAAERGGYGGERYE LEFQ+KVA+CYQ L D
Sbjct: 121 KGLDIEWCKAPEVGLLAPDIVLYLDIPPEKAAERGGYGGERYEQLEFQKKVAKCYQALCD 180
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
SSWK+IDACQ IED+EKQL++ VLD V AC++G+P S LWS
Sbjct: 181 SSWKVIDACQPIEDIEKQLQDAVLDHVMACERGRPLSYLWS 221
>gi|225452175|ref|XP_002264926.1| PREDICTED: thymidylate kinase [Vitis vinifera]
gi|296090257|emb|CBI40076.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/259 (71%), Positives = 206/259 (79%), Gaps = 6/259 (2%)
Query: 1 MTHACSFTLSKALNFGALFVRR-SKFHLNCLPKCSCTPFRMESSSSLRIGNIDSRGALVV 59
M+HA F L K LNFGA R KF N CS ME++ N DSRGAL+V
Sbjct: 1 MSHASHFRLPKLLNFGAGSARGLVKFGSNLRCNCSFRNMHMENNR-----NSDSRGALIV 55
Query: 60 LEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHL 119
LEGLDR GK+SQ SR++SYLEGLG S ELWRFPDR+T VGQMIS+YL+N+S LDDHTIHL
Sbjct: 56 LEGLDRSGKSSQSSRMMSYLEGLGVSAELWRFPDRSTCVGQMISSYLANKSDLDDHTIHL 115
Query: 120 LFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVL 179
LFSANRWEKRS+ME KL+ GTTLIVDRYSYSGVAFSSAKG+DIEWCKAPE+GLLAPD V+
Sbjct: 116 LFSANRWEKRSLMETKLRTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEMGLLAPDLVV 175
Query: 180 YLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEI 239
YL+IPPEKAAERGGYGGERYE L+FQRKVA YQ+LRD SWKIIDA IEDVEK L+++
Sbjct: 176 YLNIPPEKAAERGGYGGERYEQLDFQRKVAHHYQVLRDPSWKIIDASLPIEDVEKPLRDM 235
Query: 240 VLDQVTACKKGKPFSLLWS 258
VLD V CKKGK LWS
Sbjct: 236 VLDCVKTCKKGKTLLNLWS 254
>gi|297793501|ref|XP_002864635.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310470|gb|EFH40894.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 213/265 (80%), Gaps = 10/265 (3%)
Query: 1 MTHACSFTLSKALN--FGALFVRRS-KFHLNCLPKCSCTPFRMESS---SSLRIG-NIDS 53
M CSF+ + + F AL RS + L L + S RMESS S +R ++
Sbjct: 1 MKRICSFSSVQLFSRSFRALASPRSLNYPLQSLKRSSV---RMESSNFSSGVRTDTSVKP 57
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEGLDR GK++QC++LLS+LEGLGH ELWRFPDR TSVGQMISAYLSN+S LD
Sbjct: 58 RGALIVLEGLDRSGKSTQCAKLLSFLEGLGHPTELWRFPDRETSVGQMISAYLSNKSQLD 117
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DHTIHLLFSANRWEKRS+ME KLK GTTLIVDRYSYSGVAFSSAKG++I+WCKAPEIGLL
Sbjct: 118 DHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLNIDWCKAPEIGLL 177
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVE 233
APDSVLYLDI PE+AAERGGYG ERYE +EFQ+KVA YQ LRDSSWKII+A +++E+VE
Sbjct: 178 APDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTLRDSSWKIINAGEAMEEVE 237
Query: 234 KQLKEIVLDQVTACKKGKPFSLLWS 258
K+++E+ LD+V C KGKP SLLWS
Sbjct: 238 KKIQEVALDKVKECTKGKPLSLLWS 262
>gi|255644957|gb|ACU22978.1| unknown [Glycine max]
Length = 299
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/256 (70%), Positives = 204/256 (79%), Gaps = 3/256 (1%)
Query: 1 MTHACSFTLSKALNFGALFVRRS-KFHLNCLPKCSCTPFRMESS--SSLRIGNIDSRGAL 57
M + T SK+L F AL +++ F + KC T RMES+ S+ N SRGAL
Sbjct: 1 MIYGTCVTASKSLIFRALVLQKPLNFQVKFSSKCFPTKIRMESNLNHSIEGNNKASRGAL 60
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTI 117
VVLEGLDR GK+SQCSRL+ +LEG G S ELWRFPDRTT+VGQMISAYL+N S LDDHTI
Sbjct: 61 VVLEGLDRSGKSSQCSRLVPFLEGQGISAELWRFPDRTTNVGQMISAYLTNTSQLDDHTI 120
Query: 118 HLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDS 177
HLLFSANRWEKRS+ME+KLK GTTLIVDRYSYSGVAFSSAKG+D EWCK PEIGL APD
Sbjct: 121 HLLFSANRWEKRSLMESKLKTGTTLIVDRYSYSGVAFSSAKGLDFEWCKVPEIGLPAPDV 180
Query: 178 VLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLK 237
V+YLDI PEKAAERGGYGGERYE LEFQ+KVA Y++L D SWK +DACQ IEDVEKQL+
Sbjct: 181 VVYLDISPEKAAERGGYGGERYEKLEFQKKVADWYKVLHDVSWKDVDACQPIEDVEKQLQ 240
Query: 238 EIVLDQVTACKKGKPF 253
EIVLD VT C+KG PF
Sbjct: 241 EIVLDCVTECRKGSPF 256
>gi|145334853|ref|NP_001078772.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
gi|332009807|gb|AED97190.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
Length = 271
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 177/250 (70%), Positives = 206/250 (82%), Gaps = 8/250 (3%)
Query: 14 NFGALFVRRS-KFHLNCLPKCSCTPFRMESS---SSLRI-GNIDSRGALVVLEGLDRCGK 68
+F AL RS + L C+ + S RMESS S +R ++ RGAL+VLEGLDR GK
Sbjct: 24 SFRALASPRSLNYPLQCIKRSSV---RMESSNFSSGVRTESSVKPRGALIVLEGLDRSGK 80
Query: 69 TSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEK 128
++QC++LLS+L GLGH ELWRFPDR TSVGQMISAYLSN+S LDDHTIHLLFSANRWEK
Sbjct: 81 STQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEK 140
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
RS+ME KLK GTTLIVDRYSYSGVAFSSAKG+DIEWCKAPEIGLLAPDSVLYLDI PE+A
Sbjct: 141 RSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERA 200
Query: 189 AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
AERGGYG ERYE +EFQ+KVA YQ L DSSWKII+A ++E+VEK+++++VLDQV C
Sbjct: 201 AERGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVEKKIQQVVLDQVKECT 260
Query: 249 KGKPFSLLWS 258
+GKP SLLWS
Sbjct: 261 EGKPLSLLWS 270
>gi|357452915|ref|XP_003596734.1| Thymidylate kinase [Medicago truncatula]
gi|355485782|gb|AES66985.1| Thymidylate kinase [Medicago truncatula]
Length = 263
Score = 358 bits (920), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 208/262 (79%), Gaps = 4/262 (1%)
Query: 1 MTHACSFTLSKALNFGALFVRRS-KFHLNCLPKCSCTPFRMES---SSSLRIGNIDSRGA 56
M + T K+L+F AL + S F + KCS RME+ S S+ +SRGA
Sbjct: 1 MIYGTCITALKSLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGA 60
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+VLEGLDR GK+SQCSRL+SYLEG G S ELWRFPDRTT+VGQMISAYL+N S LDDHT
Sbjct: 61 LIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHT 120
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IHLLFSANRWEKRS+ME KLK+GTTLIVDRYSYSGVAFSSAKG+DI+WCK+PE GLLAPD
Sbjct: 121 IHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPD 180
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQL 236
V YLDI P+KAAERGGYG ERYE LEFQ+KVA+ Y++L D+SWKI+DACQ IEDVEKQL
Sbjct: 181 LVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDASWKIVDACQPIEDVEKQL 240
Query: 237 KEIVLDQVTACKKGKPFSLLWS 258
+EI L V C++GKP S LWS
Sbjct: 241 QEIALACVKQCQQGKPLSSLWS 262
>gi|30697225|ref|NP_851222.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
gi|110741098|dbj|BAE98643.1| thymidylate kinase - like protein [Arabidopsis thaliana]
gi|332009806|gb|AED97189.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
Length = 263
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/250 (70%), Positives = 206/250 (82%), Gaps = 8/250 (3%)
Query: 14 NFGALFVRRS-KFHLNCLPKCSCTPFRMESS---SSLRI-GNIDSRGALVVLEGLDRCGK 68
+F AL RS + L C+ + S RMESS S +R ++ RGAL+VLEGLDR GK
Sbjct: 16 SFRALASPRSLNYPLQCIKRSSV---RMESSNFSSGVRTESSVKPRGALIVLEGLDRSGK 72
Query: 69 TSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEK 128
++QC++LLS+L GLGH ELWRFPDR TSVGQMISAYLSN+S LDDHTIHLLFSANRWEK
Sbjct: 73 STQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEK 132
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
RS+ME KLK GTTLIVDRYSYSGVAFSSAKG+DIEWCKAPEIGLLAPDSVLYLDI PE+A
Sbjct: 133 RSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERA 192
Query: 189 AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
AERGGYG ERYE +EFQ+KVA YQ L DSSWKII+A ++E+VEK+++++VLDQV C
Sbjct: 193 AERGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVEKKIQQVVLDQVKECT 252
Query: 249 KGKPFSLLWS 258
+GKP SLLWS
Sbjct: 253 EGKPLSLLWS 262
>gi|357442919|ref|XP_003591737.1| Thymidylate kinase [Medicago truncatula]
gi|355480785|gb|AES61988.1| Thymidylate kinase [Medicago truncatula]
Length = 263
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 207/262 (79%), Gaps = 4/262 (1%)
Query: 1 MTHACSFTLSKALNFGAL-FVRRSKFHLNCLPKCSCTPFRMES---SSSLRIGNIDSRGA 56
M + T K+L+F AL F F + KCS RME+ S S+ +SRGA
Sbjct: 1 MIYGTCITALKSLSFRALVFPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGA 60
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+VLEGLDR GK+SQCSRL+SYLEG G S ELWRFPDRTT+VGQMISAYL+N S LDDHT
Sbjct: 61 LIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHT 120
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IHLLFSANRWEKRS+ME KLK+GTTLIVDRYSYSGVAFSSAKG+DI+WCKAPE GLLAPD
Sbjct: 121 IHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPENGLLAPD 180
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQL 236
V YLDI P+KAAERGGYG ERYE LEFQ+KVA+ Y++L D+SWKI+DACQ I+DVEKQL
Sbjct: 181 LVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDASWKIVDACQPIQDVEKQL 240
Query: 237 KEIVLDQVTACKKGKPFSLLWS 258
+EI L V C++GKP S LWS
Sbjct: 241 QEIALACVKQCQQGKPLSSLWS 262
>gi|21553651|gb|AAM62744.1| thymidylate kinase-like protein [Arabidopsis thaliana]
Length = 263
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/250 (70%), Positives = 206/250 (82%), Gaps = 8/250 (3%)
Query: 14 NFGALFVRRS-KFHLNCLPKCSCTPFRMESS---SSLRI-GNIDSRGALVVLEGLDRCGK 68
+F AL RS + L C+ + S RMESS S +R ++ RGAL+VLEGLDR GK
Sbjct: 16 SFRALASPRSLNYPLQCIKRSSV---RMESSNCSSGVRTESSVKPRGALIVLEGLDRSGK 72
Query: 69 TSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEK 128
++QC++LLS+L GLGH ELWRFPDR TSVGQMISAYLSN+S LDDHTIHLLFSANRWEK
Sbjct: 73 STQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEK 132
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
RS+ME KLK GTTLIVDRYSYSGVAFSSAKG+DIEWCKAPEIGLLAPDSVLYLDI PE+A
Sbjct: 133 RSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERA 192
Query: 189 AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
AERGGYG ERYE +EFQ+KVA YQ L DSSWKII+A ++E+VEK+++++VLDQV C
Sbjct: 193 AERGGYGDERYERVEFQKKVADFYQTLGDSSWKIINASDAMEEVEKKIQQVVLDQVKECT 252
Query: 249 KGKPFSLLWS 258
+GKP SLLWS
Sbjct: 253 EGKPLSLLWS 262
>gi|388518205|gb|AFK47164.1| unknown [Medicago truncatula]
Length = 263
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/261 (68%), Positives = 207/261 (79%), Gaps = 4/261 (1%)
Query: 1 MTHACSFTLSKALNFGALFVRRS-KFHLNCLPKCSCTPFRMES---SSSLRIGNIDSRGA 56
M + T K+L+F AL + S F + KCS RME+ S S+ +SRGA
Sbjct: 1 MIYGTCITALKSLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGA 60
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+VLEGLDR GK+SQCSRL+SYLEG G S ELWRFPDRTT+VGQMISAYL+N S LDDHT
Sbjct: 61 LIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHT 120
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IHLLFSANRWEKRS+ME KLK+GTTLIVDRYSYSGVAFSSAKG+DI+WCK+PE GLLAPD
Sbjct: 121 IHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPD 180
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQL 236
V YLDI P+KAAERGGYG ERYE LEFQ+KVA+ Y++L D+SWKI+DACQ IEDVEKQL
Sbjct: 181 LVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDTSWKIVDACQPIEDVEKQL 240
Query: 237 KEIVLDQVTACKKGKPFSLLW 257
+EI L V C++GKP S LW
Sbjct: 241 QEIALACVKQCQQGKPLSSLW 261
>gi|30697228|ref|NP_568907.2| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
gi|332009805|gb|AED97188.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
Length = 224
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/223 (75%), Positives = 193/223 (86%), Gaps = 4/223 (1%)
Query: 40 MESS---SSLRI-GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT 95
MESS S +R ++ RGAL+VLEGLDR GK++QC++LLS+L GLGH ELWRFPDR
Sbjct: 1 MESSNFSSGVRTESSVKPRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRE 60
Query: 96 TSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS 155
TSVGQMISAYLSN+S LDDHTIHLLFSANRWEKRS+ME KLK GTTLIVDRYSYSGVAFS
Sbjct: 61 TSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFS 120
Query: 156 SAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
SAKG+DIEWCKAPEIGLLAPDSVLYLDI PE+AAERGGYG ERYE +EFQ+KVA YQ L
Sbjct: 121 SAKGLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTL 180
Query: 216 RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
DSSWKII+A ++E+VEK+++++VLDQV C +GKP SLLWS
Sbjct: 181 GDSSWKIINASDAMEEVEKKIQQVVLDQVKECTEGKPLSLLWS 223
>gi|15912289|gb|AAL08278.1| AT5g59440/f2o15_100 [Arabidopsis thaliana]
gi|19548005|gb|AAL87366.1| AT5g59440/f2o15_100 [Arabidopsis thaliana]
Length = 224
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 192/223 (86%), Gaps = 4/223 (1%)
Query: 40 MESS---SSLRI-GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT 95
MESS S +R ++ RGAL+VLEGLDR GK++QC++LLS+L GLGH ELWRFPDR
Sbjct: 1 MESSNFSSGVRTESSVKPRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRE 60
Query: 96 TSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS 155
TSVGQMISAYLSN+S LDDHTIHLLFSANRWEKRS+ME KLK GTTLIV RYSYSGVAFS
Sbjct: 61 TSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRSLMEEKLKTGTTLIVYRYSYSGVAFS 120
Query: 156 SAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
SAKG+DIEWCKAPEIGLLAPDSVLYLDI PE+AAERGGYG ERYE +EFQ+KVA YQ L
Sbjct: 121 SAKGLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTL 180
Query: 216 RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
DSSWKII+A ++E+VEK+++++VLDQV C +GKP SLLWS
Sbjct: 181 GDSSWKIINASDAMEEVEKKIQQVVLDQVKECTEGKPLSLLWS 223
>gi|449468962|ref|XP_004152190.1| PREDICTED: thymidylate kinase-like [Cucumis sativus]
Length = 260
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/258 (64%), Positives = 196/258 (75%), Gaps = 10/258 (3%)
Query: 8 TLSKALNFGALFVRRSKFHLNCLPKCSCTPF------RMESSSSLRIGNIDSRGALVVLE 61
T K LNFG R S + PK C F +S R + +SRGALVVLE
Sbjct: 5 TFFKPLNFGVATTRISS---SFRPKVVCKNFIRKIQMGTNQNSISRDSSSNSRGALVVLE 61
Query: 62 GLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLF 121
GLDRCGKT+Q SRL YLEGLGHSVELWRFPDRTTSVGQMIS+YLSN+S LDDHTIHLLF
Sbjct: 62 GLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDDHTIHLLF 121
Query: 122 SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYL 181
SANRWEKRS+ME KLK GTT+I+DRYSYSGVAFS AKG++ EWCKAPE+GLLAPD VLYL
Sbjct: 122 SANRWEKRSLMETKLKGGTTIILDRYSYSGVAFSCAKGLNFEWCKAPEVGLLAPDLVLYL 181
Query: 182 DIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ-MLRDSSWKIIDACQSIEDVEKQLKEIV 240
+I P+ AAER GYG ERYE +EFQ +V + Y+ ++ S+W+I+DACQ +E +EK+L+EIV
Sbjct: 182 NISPKMAAERKGYGSERYEQIEFQNQVVEAYRDLMIGSNWQIVDACQPMEVIEKELQEIV 241
Query: 241 LDQVTACKKGKPFSLLWS 258
LD V C+ G P S LWS
Sbjct: 242 LDCVKKCQNGAPLSDLWS 259
>gi|449520785|ref|XP_004167413.1| PREDICTED: thymidylate kinase-like [Cucumis sativus]
Length = 260
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/258 (64%), Positives = 196/258 (75%), Gaps = 10/258 (3%)
Query: 8 TLSKALNFGALFVRRSKFHLNCLPKCSCTPF------RMESSSSLRIGNIDSRGALVVLE 61
T K LNFG R S + PK C F +S R + +SRGALVVLE
Sbjct: 5 TFFKPLNFGVATTRISS---SFRPKVVCKNFIRKIQMGTNQNSISRDSSSNSRGALVVLE 61
Query: 62 GLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLF 121
GLDRCGKT+Q SRL YLEGLGHSVELWRFPDRTTSVGQMIS+YLSN+S LDDHTIHLLF
Sbjct: 62 GLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDDHTIHLLF 121
Query: 122 SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYL 181
SANRWEKRS+ME KLK GTT+I+DRYSYSGVAFS AKG++ EWCKAPE+GLLAPD VLYL
Sbjct: 122 SANRWEKRSLMETKLKGGTTIILDRYSYSGVAFSCAKGLNFEWCKAPEVGLLAPDLVLYL 181
Query: 182 DIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ-MLRDSSWKIIDACQSIEDVEKQLKEIV 240
+I P+ AAER GYG ERYE +EFQ +V + Y+ ++ S+W+I+DAC+ +E +EK+L+EIV
Sbjct: 182 NISPKMAAERKGYGSERYEQIEFQNQVVEAYRDLMIGSNWQIVDACRPMEVIEKELQEIV 241
Query: 241 LDQVTACKKGKPFSLLWS 258
LD V C+ G P S LWS
Sbjct: 242 LDCVKKCQNGAPLSDLWS 259
>gi|148907170|gb|ABR16728.1| unknown [Picea sitchensis]
Length = 258
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 178/224 (79%), Gaps = 3/224 (1%)
Query: 37 PFRMESSSSLRIGNID---SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPD 93
P R+ S+ I N+ RGAL+VLEGLDR GK+SQC +L S L G SVE WRFPD
Sbjct: 34 PIRVAQRMSMEIANVSCDSKRGALIVLEGLDRSGKSSQCLKLASSLASQGFSVEAWRFPD 93
Query: 94 RTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVA 153
RTT++G+MISAYLS++ +DD TIHLLFSANRWEKRS+MEAK+KAGT+LIVDRYSYSGVA
Sbjct: 94 RTTAMGKMISAYLSSKEDMDDRTIHLLFSANRWEKRSLMEAKMKAGTSLIVDRYSYSGVA 153
Query: 154 FSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ 213
FS+AKG+D+ WCKAPE+GL APD VLYLDI PEKAAERGGYGGERYE L+FQRKVA+ Y
Sbjct: 154 FSAAKGLDLSWCKAPEVGLPAPDLVLYLDIAPEKAAERGGYGGERYEQLDFQRKVAELYT 213
Query: 214 MLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
L DS+W+I+DA SI+ V K LKE+ + ++ C +GK S LW
Sbjct: 214 ALSDSAWQIVDASLSIDSVHKILKELSIQCISDCHRGKELSFLW 257
>gi|357121763|ref|XP_003562587.1| PREDICTED: thymidylate kinase-like [Brachypodium distachyon]
Length = 252
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 180/221 (81%)
Query: 37 PFRMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT 96
P R + R+ N RGAL+VLEGLDR GKTSQC+RLLS+L+G G E WRFPDR T
Sbjct: 32 PQRRTAFQGARMENGGGRGALIVLEGLDRSGKTSQCARLLSFLQGKGCLAEAWRFPDRET 91
Query: 97 SVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS 156
SVG+MISAYL+N+S LDD TIHLLFSANRWEKR++ME+KL GTTL+VDRYSYSG+AFS+
Sbjct: 92 SVGKMISAYLANESQLDDRTIHLLFSANRWEKRNLMESKLLGGTTLVVDRYSYSGLAFSA 151
Query: 157 AKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR 216
AKG++IEWCKAPE+GLLAPD V+YLD+ PEKAAERGGYGGERYE +EFQ++VA+ Y LR
Sbjct: 152 AKGLEIEWCKAPEVGLLAPDLVIYLDVQPEKAAERGGYGGERYERVEFQKRVAEHYHSLR 211
Query: 217 DSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
DS+WK++D +E V++QL+E+ ++ ++ C+ + +L W
Sbjct: 212 DSTWKVVDGSLPMETVQEQLRELAMNCISECQGKQLTNLTW 252
>gi|125559330|gb|EAZ04866.1| hypothetical protein OsI_27045 [Oryza sativa Indica Group]
gi|125601251|gb|EAZ40827.1| hypothetical protein OsJ_25303 [Oryza sativa Japonica Group]
gi|215769070|dbj|BAH01299.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 253
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/219 (67%), Positives = 175/219 (79%), Gaps = 5/219 (2%)
Query: 39 RMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV 98
RMES SS RGAL+VLEGLDR GK+SQC+RLLS+L+G G E WRFPDR TSV
Sbjct: 40 RMESGSSQ-----GGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSV 94
Query: 99 GQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
GQMISAYL+N+S LDD TIHLLFSANRWEKR++ME KL GTTLIVDRYSYSGVAFS+AK
Sbjct: 95 GQMISAYLANESELDDRTIHLLFSANRWEKRALMERKLLGGTTLIVDRYSYSGVAFSAAK 154
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
G+DIEWCKAPE GL+APD V+YLD+ PEKAAERGGYGGERYE +EFQ+KV + Y LRDS
Sbjct: 155 GLDIEWCKAPENGLIAPDLVVYLDVQPEKAAERGGYGGERYEKIEFQKKVGEHYHSLRDS 214
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+WK++D +E VE+QLKE+ + + C+ + SL W
Sbjct: 215 TWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLAW 253
>gi|219886119|gb|ACL53434.1| unknown [Zea mays]
gi|414590972|tpg|DAA41543.1| TPA: thymidylate kinase [Zea mays]
Length = 255
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 177/219 (80%), Gaps = 5/219 (2%)
Query: 39 RMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV 98
RME+ G+ RGALVVLEGLDR GKTSQC+RLLS+L+G G++ E WRFPDR TSV
Sbjct: 42 RMETG-----GSKGGRGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFPDRATSV 96
Query: 99 GQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
GQMIS+YL+N S LDD TIHLLFSANRWEKR++ME+KL +GTTLIVDRYSYSGVAFS+AK
Sbjct: 97 GQMISSYLANDSQLDDRTIHLLFSANRWEKRALMESKLLSGTTLIVDRYSYSGVAFSAAK 156
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
G+DIEWCKAPE GL+APD V+YLD+ PEKAAERGGYGGERYE +EFQ+KVA+ Y LRDS
Sbjct: 157 GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAEHYHSLRDS 216
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+WK++D +E VE++L+++ + C+ +L W
Sbjct: 217 TWKVVDGFLPMETVEEKLRDLATSCIQDCQGNPLTNLAW 255
>gi|27261100|dbj|BAC45213.1| putative thymidylate kinase [Oryza sativa Japonica Group]
Length = 213
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 174/218 (79%), Gaps = 5/218 (2%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
MES SS RGAL+VLEGLDR GK+SQC+RLLS+L+G G E WRFPDR TSVG
Sbjct: 1 MESGSSQ-----GGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVG 55
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG 159
QMISAYL+N+S LDD TIHLLFSANRWEKR++ME KL GTTLIVDRYSYSGVAFS+AKG
Sbjct: 56 QMISAYLANESELDDRTIHLLFSANRWEKRALMERKLLGGTTLIVDRYSYSGVAFSAAKG 115
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS 219
+DIEWCKAPE GL+APD V+YLD+ PEKAAERGGYGGERYE +EFQ+KV + Y LRDS+
Sbjct: 116 LDIEWCKAPENGLIAPDLVVYLDVQPEKAAERGGYGGERYEKIEFQKKVGEHYHSLRDST 175
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
WK++D +E VE+QLKE+ + + C+ + SL W
Sbjct: 176 WKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLAW 213
>gi|242046716|ref|XP_002461104.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
gi|241924481|gb|EER97625.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
Length = 254
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 178/223 (79%), Gaps = 13/223 (5%)
Query: 39 RMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV 98
RME SS RGALVVLEGLDR GK+SQC+RLLS+L+G G+ E WRFPDR TSV
Sbjct: 41 RMEMGSS-----KGGRGALVVLEGLDRSGKSSQCARLLSFLKGKGYDAEGWRFPDRATSV 95
Query: 99 GQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
GQMISAYL+N+S LDD TIHLLFSANRWEKR++ME+KL +GTTL+VDRYSYSGVAFS+AK
Sbjct: 96 GQMISAYLANESQLDDRTIHLLFSANRWEKRALMESKLLSGTTLVVDRYSYSGVAFSAAK 155
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
G+DIEWCKAPE GL+APD V+YLD+ PEKAAERGGYGGERYE +EFQ+KVA+ Y LR S
Sbjct: 156 GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAEHYHSLRGS 215
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTAC---KKGKPFS-LLW 257
+WK+ID +E VE++L+ D T+C ++G P + L W
Sbjct: 216 TWKVIDGSLPMETVEEKLR----DLATSCIQERQGNPLTNLAW 254
>gi|357519503|ref|XP_003630040.1| Thymidylate kinase [Medicago truncatula]
gi|355524062|gb|AET04516.1| Thymidylate kinase [Medicago truncatula]
Length = 356
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 169/219 (77%), Gaps = 20/219 (9%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTI 117
+ LDR GK+SQCSRL+SYLEG G S ELWRFPDRTT+VGQMISAYL+N S LDDHTI
Sbjct: 139 ITFRCLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTI 198
Query: 118 HLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDS 177
HLLFSANRWEKRS+ME KLK+GTTLIVDRYSYSGVAFSSAKG+DI+W P LLAPD
Sbjct: 199 HLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWF--PRKRLLAPDL 256
Query: 178 VLYLDIPP------------------EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS 219
V YLDI P +KAAERGGYG ERYE LEFQ+KVA+ Y++L D+S
Sbjct: 257 VAYLDISPDLMHASLFFLFVLFAHSYQKAAERGGYGDERYEKLEFQQKVAEHYKVLHDAS 316
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
WKI+DACQ IEDVEKQL+EI L V C++GKP S LWS
Sbjct: 317 WKIVDACQPIEDVEKQLQEIALACVKQCQQGKPLSSLWS 355
>gi|226529697|ref|NP_001150303.1| LOC100283933 [Zea mays]
gi|195638226|gb|ACG38581.1| thymidylate kinase [Zea mays]
Length = 255
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 174/219 (79%), Gaps = 5/219 (2%)
Query: 39 RMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV 98
RME+ G+ RGALVVLEGLDR GKTSQC+RLLS+L+G G++ E W FPDR TSV
Sbjct: 42 RMETG-----GSKGGRGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWSFPDRATSV 96
Query: 99 GQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
GQMIS+YL+N S LDD TIHLLFSANRWEKR++ME+KL +GTTLIVDRYSYSGVAFS+AK
Sbjct: 97 GQMISSYLANDSQLDDRTIHLLFSANRWEKRALMESKLLSGTTLIVDRYSYSGVAFSAAK 156
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
G+DIEWCKAPE GL+APD V+YLD+ PEKAAERGGYG ERYE +EFQ+KVA+ Y L DS
Sbjct: 157 GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGDERYEKIEFQKKVAEHYHSLCDS 216
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+WK++D +E VE++L+++ + C+ +L W
Sbjct: 217 TWKVVDGFLPMETVEERLRDLATSCIQDCQGNPLTNLAW 255
>gi|414590971|tpg|DAA41542.1| TPA: hypothetical protein ZEAMMB73_880960 [Zea mays]
Length = 229
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 160/189 (84%), Gaps = 5/189 (2%)
Query: 39 RMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV 98
RME+ G+ RGALVVLEGLDR GKTSQC+RLLS+L+G G++ E WRFPDR TSV
Sbjct: 42 RMETG-----GSKGGRGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFPDRATSV 96
Query: 99 GQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
GQMIS+YL+N S LDD TIHLLFSANRWEKR++ME+KL +GTTLIVDRYSYSGVAFS+AK
Sbjct: 97 GQMISSYLANDSQLDDRTIHLLFSANRWEKRALMESKLLSGTTLIVDRYSYSGVAFSAAK 156
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
G+DIEWCKAPE GL+APD V+YLD+ PEKAAERGGYGGERYE +EFQ+KVA+ Y LRDS
Sbjct: 157 GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAEHYHSLRDS 216
Query: 219 SWKIIDACQ 227
+WK+ Q
Sbjct: 217 TWKVTQFLQ 225
>gi|3493131|gb|AAC33288.1| thymidylate kinase, partial [Arabidopsis thaliana]
Length = 188
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 131/158 (82%), Positives = 143/158 (90%)
Query: 61 EGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLL 120
+GLDR GK++QC++LLS+L GLGH ELWRFPDR TSVGQMISAYLSN+S LDDHTIHLL
Sbjct: 1 KGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLL 60
Query: 121 FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLY 180
FSANRWEKRS+ME KLK GTTLIVDRYSYSGVAFSSAKG+DIEWCKAPEIGLLAPDSVLY
Sbjct: 61 FSANRWEKRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLY 120
Query: 181 LDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
LDI PE+AAERGGYG ERYE +EFQ+KVA YQ L DS
Sbjct: 121 LDISPERAAERGGYGDERYERVEFQKKVADFYQTLGDS 158
>gi|168050195|ref|XP_001777545.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671030|gb|EDQ57588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 162/209 (77%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G RGAL+VLEGLDR GK+SQC++L SYLE G +VE WRFPDRTT++G+MIS+YLS
Sbjct: 10 GENTGRGALIVLEGLDRSGKSSQCAQLASYLESQGVAVEAWRFPDRTTAMGRMISSYLSC 69
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
Q+ LD IHLLFSANRWEK S+ME+KLKAGTTL++DRYSYSGVAFS AKG+D++WCK P
Sbjct: 70 QTDLDAAAIHLLFSANRWEKCSLMESKLKAGTTLVIDRYSYSGVAFSVAKGLDLDWCKGP 129
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
E GL APD V YLDI E AA RGGYGGERYE LE Q+KV + ++ L+D++W+ +DA QS
Sbjct: 130 EAGLPAPDLVFYLDISAEVAAARGGYGGERYEKLEIQKKVEKVFKSLKDTTWQSVDATQS 189
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
I+ ++ L+E + + C+ GK +W
Sbjct: 190 IDSIQSVLREESVKAINECQSGKQLMQMW 218
>gi|302795849|ref|XP_002979687.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
gi|300152447|gb|EFJ19089.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
Length = 253
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 158/208 (75%), Gaps = 1/208 (0%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ RGAL+VLEGLDR GK+SQC RL+ +L+G G VE WRFPDRTT++G ISAYL +
Sbjct: 4 EKRGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAE 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LDD +HLLFSANRWEKR ME KL AGTTL+VDRYSYSGVAFS+AKG+D+EWCKAPE+G
Sbjct: 64 LDDRAVHLLFSANRWEKRLQMEKKLMAGTTLVVDRYSYSGVAFSAAKGLDLEWCKAPEVG 123
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIED 231
L A D VLYLDI PE+AA RGGYG ERYE L+FQ+KVA Y+ L+ WKI+DA QS +
Sbjct: 124 LPAADLVLYLDISPEEAAVRGGYGDERYEQLDFQKKVALQYKGLQGKRWKIVDARQSFDQ 183
Query: 232 VEKQLKEIVLDQVTACKKG-KPFSLLWS 258
V + ++E + V+ C G S LW+
Sbjct: 184 VHELMRETCVKTVSNCLNGCHHLSRLWT 211
>gi|302807401|ref|XP_002985395.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
gi|300146858|gb|EFJ13525.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
Length = 229
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 158/208 (75%), Gaps = 1/208 (0%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ RGAL+VLEGLDR GK+SQC RL+ +L+G G VE WRFPDRTT++G ISAYL +
Sbjct: 4 EKRGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAE 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LDD +HLLFSANRWEKR ME KL AGTTL+VDRYSYSGVAFS+AKG+D+EWCKAPE+G
Sbjct: 64 LDDRAVHLLFSANRWEKRLQMERKLMAGTTLVVDRYSYSGVAFSAAKGLDLEWCKAPEVG 123
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIED 231
L A D VLYLDI PE+AA RGGYG ERYE L+FQ+KVA Y+ L+ WKI+DA QS +
Sbjct: 124 LPAADLVLYLDISPEEAAVRGGYGDERYEQLDFQKKVALQYKGLQGKRWKIVDARQSFDQ 183
Query: 232 VEKQLKEIVLDQVTACKKG-KPFSLLWS 258
V + ++E + V+ C G S LW+
Sbjct: 184 VHELMRETCVKTVSNCLNGCHHLSWLWT 211
>gi|384246983|gb|EIE20471.1| hypothetical protein COCSUDRAFT_48524 [Coccomyxa subellipsoidea
C-169]
Length = 226
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA ++ EG+DRCGKT+Q RL+ YL+G G + ELWRFPDR T++G+MI +YLS ++ D
Sbjct: 14 RGAFLLFEGVDRCGKTTQSQRLVEYLKGKGVAAELWRFPDRYTAIGRMIDSYLSGETEAD 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
D +HLLFSANRWEKR M A L AG TL+VDRY+YSG AF++AK G+D+EWCKAP+
Sbjct: 74 DAAVHLLFSANRWEKREAMLAALHAGHTLVVDRYAYSGAAFTAAKKVPGLDLEWCKAPDK 133
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIE 230
GL APD+V+YL + PE AA RGGYG ERYE E Q++V++ + +L D +W +DA QS++
Sbjct: 134 GLPAPDAVIYLSMSPEAAALRGGYGKERYEKEEMQKEVSRQFALLADDTWHTVDAAQSVK 193
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLWS 258
VE Q++EI V +C KG P LLW+
Sbjct: 194 AVESQVQEIAEGAVASCSKGPPLRLLWT 221
>gi|303277967|ref|XP_003058277.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460934|gb|EEH58228.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 158/213 (74%), Gaps = 3/213 (1%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+ ++ +RGA ++ EG+DRCGKT+Q ++L+ L+ G + ELWR+PDRTTS+GQMI++YL
Sbjct: 1 MASLVARGAFILFEGVDRCGKTTQSTKLVEALKSSGVNAELWRYPDRTTSMGQMINSYLQ 60
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEW 164
+++ +DD IHLLF+ANRWEKR+ MEAKL G TL+VDRYSYSGVAF++AKGI D+EW
Sbjct: 61 SKTEMDDGAIHLLFAANRWEKRAAMEAKLAEGVTLVVDRYSYSGVAFTAAKGIPGLDLEW 120
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIID 224
CK+PE+GLL PD+VLYL++P E AA RGG+G ERYE + Q+ V + LR+ W I+D
Sbjct: 121 CKSPEVGLLRPDAVLYLNMPVEAAAARGGFGEERYETSDLQKAVRANFDKLREDWWTIVD 180
Query: 225 ACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
A ++++V + + D V C G P++ LW
Sbjct: 181 ATGTVDEVHAACRAVADDAVAKCVAGAPYARLW 213
>gi|307109187|gb|EFN57425.1| hypothetical protein CHLNCDRAFT_20952 [Chlorella variabilis]
Length = 230
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 152/209 (72%), Gaps = 4/209 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V EG DR GK++QC L+ +L+ G + ELWRFPDRTT +G+MI++YL++QS +
Sbjct: 6 ARGAFIVFEGADRAGKSTQCQMLVEHLQAQGVAAELWRFPDRTTPIGKMINSYLTSQSDI 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DD +HLLFSANRWEKR + KL GTTL+VDRY+YSGVAF++AK G+D WC AP+
Sbjct: 66 DDAAVHLLFSANRWEKREELLRKLHEGTTLVVDRYAYSGVAFTAAKGLPGLDRAWCMAPD 125
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
GL APD+V +L + E+AA RGGYG ERYE EFQRKV + +R SSW+++DA QSI
Sbjct: 126 AGLPAPDAVFFLCLTVEQAAARGGYGEERYEKDEFQRKVLDQFHAMRGSSWRVVDASQSI 185
Query: 230 EDVEKQLKEIVLDQVTACKKG-KPFSLLW 257
+ +++QL+E V C++G P LW
Sbjct: 186 DAIQQQLREQAAAVVARCQRGTSPVGKLW 214
>gi|255071733|ref|XP_002499541.1| predicted protein [Micromonas sp. RCC299]
gi|226514803|gb|ACO60799.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 149/209 (71%), Gaps = 3/209 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA ++ EG+DRCGKT+Q ++L+ L+ G + ELWR+PDRTT +G+MI+AYL + +
Sbjct: 8 ARGAFILFEGVDRCGKTTQSTKLVESLKAAGVNAELWRYPDRTTEMGKMINAYLQSSLDM 67
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DD IHLLFSANRWEKR+ ME L G TL+VDRYSYSGVAF++AK G+D+EWCKAPE
Sbjct: 68 DDGAIHLLFSANRWEKRAAMEKALGDGVTLVVDRYSYSGVAFTAAKEVPGLDLEWCKAPE 127
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
GLL PD+VLYLD+P + A RGG+G ERYE E Q +V +++LR+ W IIDA +I
Sbjct: 128 RGLLRPDAVLYLDMPVDAAKTRGGFGEERYETGELQERVRTHFRVLREDWWTIIDASGTI 187
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
+DV + + + C++G + LW
Sbjct: 188 DDVHSKCAAAADEAIQRCREGAELARLWD 216
>gi|308805831|ref|XP_003080227.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
gi|116058687|emb|CAL54394.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
Length = 1006
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 165/256 (64%), Gaps = 7/256 (2%)
Query: 5 CSFTLSKALNFGALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGNIDSRGALVVLEGLD 64
C F LN AL V R+ H CL + S R ++R+ SRGALV+ EG D
Sbjct: 313 CRFLCGFFLN--ALVVIRASTHRRCLSRASTRRRRRARVDAVRMSA--SRGALVLFEGAD 368
Query: 65 RCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSAN 124
RCGK++Q RL+ LE G ELWR+PDRTT G+MI AYL ++S D IHLLF+AN
Sbjct: 369 RCGKSTQARRLVKTLEQRGVRAELWRYPDRTTKTGEMIDAYLRSESDTADAAIHLLFAAN 428
Query: 125 RWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPEIGLLAPDSVLYL 181
RWEK+++ME KL G TL+ DRYSYSG AF++AKG+ D+ WCKAPE+GL PD+++YL
Sbjct: 429 RWEKKALMERKLADGVTLVCDRYSYSGCAFTAAKGVEGLDLTWCKAPEVGLPRPDALMYL 488
Query: 182 DIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVL 241
++ E AA RGG+G ERYE E QR V + ++ +R+ W +IDA + E +E+++ EI L
Sbjct: 489 ELSLEDAARRGGFGEERYETTEMQRAVKEMFESMREPWWDVIDANRDEEVIEREVLEIAL 548
Query: 242 DQVTACKKGKPFSLLW 257
+ K G+P LW
Sbjct: 549 GAIERAKSGEPLGTLW 564
>gi|145348882|ref|XP_001418872.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579102|gb|ABO97165.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 149/212 (70%), Gaps = 3/212 (1%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G + +RGA V+ EG DRCGK++Q RL+ LE G ELWR+PDR T++G+MI YL +
Sbjct: 5 GKVAARGAFVLFEGADRCGKSTQAMRLVHTLEARGVEAELWRYPDRATAMGKMIDQYLRS 64
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWC 165
+S ++D IHLLF+ANRWEK+++ME KL +G TL+ DRYSYSG AF++AKG+ D+EWC
Sbjct: 65 KSEMEDGAIHLLFAANRWEKKALMERKLASGVTLVCDRYSYSGCAFTAAKGVDGLDLEWC 124
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDA 225
+APE+GL PD+++YL++ E AA+RGG+G ERYE E QR V ++ +R+ W +IDA
Sbjct: 125 RAPEVGLPRPDALMYLELSLEDAAKRGGFGEERYETTEMQRAVKASFEAMREDWWDVIDA 184
Query: 226 CQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+ + ++ ++ I L V C+ G+ LW
Sbjct: 185 NREPDVIQDEVLRIALSAVEKCRAGRELKRLW 216
>gi|291221635|ref|XP_002730837.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 211
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 147/205 (71%), Gaps = 2/205 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DRCGK++Q +L+ L G ELWRFP+R++S+GQ+I +YL +S ++
Sbjct: 7 RGALIVLEGCDRCGKSTQARKLVDTLVAGGTPAELWRFPERSSSIGQLIGSYLEKKSEVE 66
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH IHLLFSANRWE M L+ GTT++VDRY+YSGVAF++AK G DIEWCK P+ GL
Sbjct: 67 DHAIHLLFSANRWESVPRMRKLLQDGTTVVVDRYAYSGVAFTAAKEGFDIEWCKQPDRGL 126
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD VLYL I E AA+R +GGERYE +FQ++VA Y +LR+ W+ +DA QSI+D+
Sbjct: 127 PEPDLVLYLTIGAEDAAKRADFGGERYEQTDFQKRVADMYGLLREDRWETLDASQSIKDL 186
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLW 257
Q+ ++ D +T + KP + LW
Sbjct: 187 HDQIAKLTRDIITRVEN-KPINKLW 210
>gi|412986780|emb|CCO15206.1| thymidylate kinase [Bathycoccus prasinos]
Length = 219
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGA ++ EG+DRCGKT+Q S+L+ L G + ELWR+PDRTT++G+MI YL ++
Sbjct: 9 SRGAFILFEGVDRCGKTTQASKLVESLNQSGVASELWRYPDRTTTIGKMIDDYLQCKADS 68
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DD ++HLLF+ANRWEK+ MME KL+AG TL+VDRY YSGVAF+SAK G+D +WCK E
Sbjct: 69 DDASMHLLFAANRWEKKKMMEEKLRAGVTLVVDRYGYSGVAFTSAKKLPGLDQQWCKHSE 128
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
GL+ PD ++Y++I + A +RGG+G ERYE E Q+ V + + LR+ W ++DA ++I
Sbjct: 129 TGLVKPDCLMYMEISEDAAKKRGGFGEERYETTEMQKNVREVFADLREDWWNVVDADRTI 188
Query: 230 EDVEKQLKEIVLDQVTACKKGKPF 253
E+V+K ++ I D V CK+GK
Sbjct: 189 EEVQKDVQTIAKDAVERCKRGKEL 212
>gi|156380955|ref|XP_001632032.1| predicted protein [Nematostella vectensis]
gi|156219082|gb|EDO39969.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 149/210 (70%), Gaps = 2/210 (0%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
+ +RGAL+ EG DR GK++Q L+ YL LG ++E RFPDR+T++GQ I++YL
Sbjct: 2 TLSTRGALICFEGCDRSGKSTQSRLLVDYLRSLGTNIEHMRFPDRSTAIGQCINSYLQGT 61
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAP 168
S LDDH IHLLFSANRWE S + + L GTT++VDRY++SGVAF+SA KG D+EWCKAP
Sbjct: 62 SELDDHAIHLLFSANRWESVSKIRSLLNTGTTIVVDRYAFSGVAFTSAKKGFDLEWCKAP 121
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+ GL APD V++LDI + AAER YGGERYE +FQR VA Y+ L+ SWK++DA +S
Sbjct: 122 DRGLPAPDIVIFLDISVDNAAERSEYGGERYETSDFQRSVANRYKELQADSWKVLDAGKS 181
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
IE++ K++++I + + K LW+
Sbjct: 182 IEELHKEIQKIACETIKLASD-KALETLWT 210
>gi|148231460|ref|NP_001084596.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus laevis]
gi|46250064|gb|AAH68663.1| MGC81047 protein [Xenopus laevis]
Length = 212
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q RL+ L+ G+ E RFP+RTT +GQ+I +YL +S+L+
Sbjct: 5 RGALIVLEGADRAGKSTQARRLVEALKERGYRTEGLRFPERTTEIGQLIGSYLEKKSNLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHTIHLLFSANRWE+ M++ KL++G TL+VDRY++SGVAF+S+K D+ WCK P++GL
Sbjct: 65 DHTIHLLFSANRWEQVPMIKEKLRSGITLVVDRYAFSGVAFTSSKENFDLHWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS---SWKIIDACQSI 229
PD VL+L + PE AA RGG+G E YE FQ KVA+ Y L D +WK++DA Q I
Sbjct: 125 PKPDLVLFLKVSPEVAATRGGFGNEIYETNSFQEKVAKRYAQLMDDKTVNWKLVDASQDI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V +QLKE+ ++ K +P LW
Sbjct: 185 ENVHRQLKELS-EKAIDDAKDQPIGKLW 211
>gi|80751137|ref|NP_001032187.1| thymidylate kinase [Danio rerio]
gi|78070418|gb|AAI07816.1| Zgc:123174 [Danio rerio]
Length = 212
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 152/208 (73%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+QC +L+ ++ G + E+ RFPDRTT +GQ+IS+YL +S+L+
Sbjct: 5 RGALIVLEGVDRAGKTTQCQKLVQAIQQSGRAAEIMRFPDRTTKIGQLISSYLEKKSNLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE +M+ KL+ G L+VDRY++SGVAF+SAK G +EWC P++GL
Sbjct: 65 DHTVHLLFSANRWEMVPVMKQKLEEGINLVVDRYAFSGVAFTSAKPGFSLEWCMNPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD V++L + P AA RG YG ERYE FQR V Q + ++++D+S WK+IDA ++I
Sbjct: 125 PKPDLVMFLQLNPNVAANRGEYGNERYETSAFQRTVQQRFEELMQDTSINWKVIDAARTI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V K +K++ + + + + +P LW
Sbjct: 185 EEVHKDIKDLS-ENIISLAEEQPVGELW 211
>gi|348513456|ref|XP_003444258.1| PREDICTED: thymidylate kinase-like [Oreochromis niloticus]
Length = 249
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 152/215 (70%), Gaps = 5/215 (2%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+G RGAL+VLEG+DR GKT+QCS+L+ L+ G E+ RFPDRTT++GQ+I AYL
Sbjct: 31 LGMAGKRGALIVLEGVDRAGKTTQCSKLVQALQQSGRPAEMMRFPDRTTTIGQLIGAYLE 90
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCK 166
N+S L+DHT+HLLFSANRWE +M+ KL+ G TL+VDRY++SGVAF+SAK G ++WC
Sbjct: 91 NKSDLEDHTVHLLFSANRWEMVPLMKKKLEQGITLVVDRYAFSGVAFTSAKPGFRLDWCM 150
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKII 223
P++GL PD V++L + P +AA RG +G ERYE FQR V Q + Q+++D + W++I
Sbjct: 151 QPDVGLPKPDLVMFLQLNPAEAALRGQFGQERYETSVFQRTVQQRFEQLMKDQTVNWQVI 210
Query: 224 DACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
DA Q+IE+V + + L+ + + P LWS
Sbjct: 211 DAAQNIENVHRDITAHSLNAINKAQN-LPLGELWS 244
>gi|55742029|ref|NP_001006834.1| thymidylate kinase [Xenopus (Silurana) tropicalis]
gi|49899892|gb|AAH76907.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana)
tropicalis]
gi|89266991|emb|CAJ81735.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana)
tropicalis]
Length = 216
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 151/208 (72%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q RL+ L+ G+ E RFP+RTT +G++I +YL +S+L+
Sbjct: 5 RGALIVLEGADRAGKSTQARRLVEALKERGYKTEGLRFPERTTEIGRLIGSYLEKKSNLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHTIHLLFSANRWE+ M++ KL++G TL++DRY++SGVAF+S+K D+ WCK P++GL
Sbjct: 65 DHTIHLLFSANRWEQVPMIKEKLRSGVTLVIDRYAFSGVAFTSSKENFDLHWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L++ PE AA RGG+G E YE FQ KV++ Y +++ D + W +IDA Q+I
Sbjct: 125 PKPDLVLFLNVSPEVAASRGGFGNEIYETNSFQEKVSKRYAELMEDKTVNWTLIDASQNI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
EDV +QLKE+ ++ K KP LW
Sbjct: 185 EDVHRQLKELT-EKAIEDAKDKPIGKLW 211
>gi|327267155|ref|XP_003218368.1| PREDICTED: thymidylate kinase-like [Anolis carolinensis]
Length = 212
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 149/208 (71%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q RL+ L GH EL RFP+RTT +GQ+IS+YL +++L+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRRLVEALGAKGHRAELLRFPERTTKIGQLISSYLEKKNNLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK +EWCK P++GL
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLNQGITLVVDRYAFSGVAFTGAKENFSLEWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC-YQMLRDSS--WKIIDACQSI 229
PD +L+L + +AA+RG +G ERYE+ FQ KV QC Y ++ D + WK+IDA ++I
Sbjct: 125 PKPDVILFLQLNTSEAAKRGDFGSERYENSSFQEKVLQCYYDLMEDKTLNWKVIDASKTI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
ED+ ++K IV + + + KP LW
Sbjct: 185 EDLHNEIKSIVEEAMQEAQH-KPIGELW 211
>gi|410920720|ref|XP_003973831.1| PREDICTED: thymidylate kinase-like isoform 1 [Takifugu rubripes]
Length = 212
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 145/208 (69%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D+ GKT+QC +L+ L GH E+ RFPDRTT++G+MISAYL NQS L
Sbjct: 5 RGALIVLEGVDKAGKTTQCQKLVQALRRKGHPAEMMRFPDRTTTIGKMISAYLENQSELS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
D T+HLLFSANRWE +++ KL+ GTTL+VDRY++SGVAF+SAK G + WCK P++GL
Sbjct: 65 DQTVHLLFSANRWELVPLIKKKLEQGTTLVVDRYAFSGVAFTSAKPGFSLHWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS---SWKIIDACQSI 229
PD VL+L + P +AA RG +G ERYE FQ V Q ++ L + +WK+IDA ++
Sbjct: 125 PKPDLVLFLQLSPAEAALRGHFGMERYEKSSFQCAVQQQFKHLMEDETVNWKVIDASMNV 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
EDV K + E L+ + + P LW
Sbjct: 185 EDVHKDITEHSLNAINIA-QNLPLGELW 211
>gi|358060041|dbj|GAA94100.1| hypothetical protein E5Q_00747 [Mixia osmundae IAM 14324]
Length = 212
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 140/197 (71%), Gaps = 7/197 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VLEGLDR GK++QC+RL+ +L+ G EL RFPDRTT +G+MI +YL++Q+ ++
Sbjct: 2 RGRFFVLEGLDRSGKSTQCARLVEHLQRQGRKAELLRFPDRTTPMGKMIDSYLTSQTDMN 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWEK + + KL+ ++ DRY++SG+AFS AKG+D +WCKAP++GL
Sbjct: 62 DQAIHLLFSANRWEKAASIRQKLRDSIDIVCDRYAFSGIAFSVAKGLDYQWCKAPDVGLP 121
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS------SWKIIDACQ 227
APD VL+LDI PE A +RGGYG ERYE E Q KV + + +RD W ++DA Q
Sbjct: 122 APDQVLFLDISPEHAEQRGGYGQERYEKREMQLKVREVFGRIRDDMTSAQGKWSVVDAGQ 181
Query: 228 SIEDVEKQLKEIVLDQV 244
S+E V Q++ I DQV
Sbjct: 182 SLEAVSLQIQHIA-DQV 197
>gi|157116910|ref|XP_001652904.1| Thymidylate kinase, putative [Aedes aegypti]
gi|108883432|gb|EAT47657.1| AAEL001246-PA [Aedes aegypti]
Length = 249
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 43 SSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMI 102
+SS + I RGAL+VLEG DR GKT+QC R++ L GH + FPDR+T G +I
Sbjct: 35 NSSPNMSIIQKRGALIVLEGCDRAGKTTQCKRIVESLNSAGHKAKFMNFPDRSTQFGALI 94
Query: 103 SAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI 162
++YL+++ + D IHLLF+ NRWE ++ ME L++G TLIVDRYSYSGVAFS+AKG+++
Sbjct: 95 NSYLTSKDNFTDEAIHLLFTLNRWEAKNEMERLLRSGVTLIVDRYSYSGVAFSAAKGLNM 154
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WK 221
+WCKAPE GL PD VL L + E A+RGG+G ERYE E Q+KV + + L+D S WK
Sbjct: 155 DWCKAPETGLPKPDLVLLLTLTAEAMAKRGGFGQERYEVPELQKKVMEKFHTLKDDSYWK 214
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
++DA + + + +L E+VLD + +C KP LW
Sbjct: 215 VVDADKKEDALSLELCEMVLDSMESCSD-KPLGKLW 249
>gi|443697237|gb|ELT97772.1| hypothetical protein CAPTEDRAFT_132783 [Capitella teleta]
Length = 218
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+ I RGAL+VLEG DR GKT+QC +L+ L G +LWRFP+R T++GQ++S YL
Sbjct: 1 MSRIARRGALIVLEGCDRSGKTTQCRKLVDALNTDGIPAQLWRFPERDTAIGQVVSDYLE 60
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCK 166
+ LDDH +HLLFSANRWE M LK GTTL++DRY++SGVAFS+AK +D EWCK
Sbjct: 61 RKCELDDHAVHLLFSANRWELVPKMLETLKNGTTLVIDRYAFSGVAFSAAKESLDFEWCK 120
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDAC 226
++GL PD +LYL++ E AA+R YGGERYE FQ++VA+ Y L D WK+IDA
Sbjct: 121 KSDVGLPRPDLILYLNLGVEAAAQRSEYGGERYEQKPFQKRVAENYAALMDDDWKVIDAA 180
Query: 227 QSIEDVEKQLKEIVLDQVTACK-KGKPFSLLWS 258
+ I ++ +LK IV + V G+P LW+
Sbjct: 181 KGINELHDELKSIVKNFVLKGDVHGEPVGKLWT 213
>gi|395528688|ref|XP_003766459.1| PREDICTED: thymidylate kinase isoform 1 [Sarcophilus harrisii]
Length = 212
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 151/208 (72%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++QC +L++ L GH EL RFP+R+T +G+++SAYL +S+++
Sbjct: 5 RGALIVLEGMDRAGKSTQCRKLVTTLLESGHRAELLRFPERSTEIGKLLSAYLEKKSNME 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK + WCK P++GL
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTSAKENFSLNWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC-YQMLRDSS--WKIIDACQSI 229
PD +L+L + ++AA+RG +G ERYE+ FQ K QC YQ+++D S WK I+A QSI
Sbjct: 125 PKPDLILFLQLSSQEAAKRGDFGTERYENNAFQEKALQCFYQLMKDDSLNWKTINASQSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
ED+ K++ + + + ++ P LW
Sbjct: 185 EDLHKEIYSLAEETIQMVQE-TPMGELW 211
>gi|170032238|ref|XP_001843989.1| thymidylate kinase [Culex quinquefasciatus]
gi|167872105|gb|EDS35488.1| thymidylate kinase [Culex quinquefasciatus]
Length = 210
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 140/198 (70%), Gaps = 1/198 (0%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+ RGAL+VLEG DR GKT+QC R++ +L G + FPDR+T G++I++YL+N+
Sbjct: 4 VQKRGALIVLEGCDRAGKTTQCKRIVEHLTQSGRKAKFMNFPDRSTDCGKLINSYLTNKD 63
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+ D IHLLF+ NRWE R ME L+ GTTLIVDRYSYSGVAFSSAKG+D+EWCKAPE
Sbjct: 64 NFTDEGIHLLFTLNRWEARKQMEQLLQDGTTLIVDRYSYSGVAFSSAKGLDMEWCKAPEA 123
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKIIDACQSI 229
GLL PD V+ L + E A+RGG+G ERYE EFQR+V + LRD + W+ IDA +
Sbjct: 124 GLLKPDLVILLTLTAEALAKRGGFGEERYEVPEFQRRVMGKFAELRDDTYWRQIDADKGQ 183
Query: 230 EDVEKQLKEIVLDQVTAC 247
+++ +L E+VL + AC
Sbjct: 184 DELTVELSELVLGTIDAC 201
>gi|326925772|ref|XP_003209083.1| PREDICTED: thymidylate kinase-like isoform 1 [Meleagris gallopavo]
Length = 212
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q RL+ L+ GH +L RFP+RTT +G++I AYLS + L+
Sbjct: 5 RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLSRERELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE + M+ KL G TL+VDRY++SGVAF+SAK +EWCK P++GL
Sbjct: 65 DHVVHLLFSANRWEHVTSMKEKLHQGITLVVDRYAFSGVAFTSAKENFCLEWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS---SWKIIDACQSI 229
PD +L+L + PE+AA RG +G ERYE+ FQ+KV Q + L + +WK +DA +SI
Sbjct: 125 PKPDLILFLQLSPEEAAARGNFGRERYENGPFQKKVLQSFHHLMNEKTLNWKTMDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
ED+ +++K V ++ K KP LW
Sbjct: 185 EDLHREIK-TVAEKTMQEVKDKPLGELW 211
>gi|302851470|ref|XP_002957259.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
nagariensis]
gi|300257509|gb|EFJ41757.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
nagariensis]
Length = 546
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 141/208 (67%), Gaps = 3/208 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EG DRCGKT+QC +L+ L G +WRFPDR+TS+GQ I+AYL QSH+
Sbjct: 11 SRGALIVFEGGDRCGKTTQCRKLVERLRSQGVDAVMWRFPDRSTSIGQAINAYLVEQSHM 70
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
DD HLLF+ANR EKR M L TTL+VDRYSYSGVA+++AKG+ +++C+A E
Sbjct: 71 DDAVAHLLFAANRMEKREEMLRLLSGRTTLVVDRYSYSGVAYTAAKGVPHLSMDYCRAVE 130
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
+GL A D V+++D+ E A RGGYG ERYE ++FQ+KV + ++ LRD W +IDA +I
Sbjct: 131 VGLPAADLVIFMDMTAEATAARGGYGQERYEKVDFQQKVMKAFEALRDERWAVIDASGTI 190
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+D+ +++ + V G LW
Sbjct: 191 DDIHQKVAAVAEPVVQRALAGSALGRLW 218
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 135/244 (55%), Gaps = 52/244 (21%)
Query: 47 RIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL 106
++ + SRGA +V EG+DRCGK++Q + L+ +L G VE W FPDR+T +GQ I+ YL
Sbjct: 264 KMQQVRSRGAFIVFEGIDRCGKSTQSNLLVDHLRRRGVKVEHWCFPDRSTRIGQTINDYL 323
Query: 107 SNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIE 163
N + DD IHLLF+ANR+EKR YSGVA+++AKG+ ++
Sbjct: 324 HNGADHDDTAIHLLFTANRFEKR-------------------YSGVAYTAAKGVPHLSMD 364
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRK---------------- 207
+C+A E+GL A D V+++D+ E+AA RGG+G ERYE LEFQRK
Sbjct: 365 YCRAVEVGLPAADLVIFMDMTAEEAAARGGFGAERYEKLEFQRKASLGIVTGAWRRLVVT 424
Query: 208 --------------VAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPF 253
VAQ Y L+DS W +DA Q E +++Q+ + VL V +G
Sbjct: 425 PAILMPLSCRPTKQVAQQYAALKDSHWLRLDATQQPECLQQQVVDAVLPVVEGAARGALL 484
Query: 254 SLLW 257
LW
Sbjct: 485 GRLW 488
>gi|320169555|gb|EFW46454.1| deoxythymidylate kinase [Capsaspora owczarzaki ATCC 30864]
Length = 210
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 138/205 (67%), Gaps = 1/205 (0%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V EG DR GK++QC L+ L+ LG V+ RFPDR+T GQ I+AYL+N S +
Sbjct: 7 ARGALIVFEGCDRSGKSTQCLMLVERLKALGKRVQHLRFPDRSTPTGQKINAYLANASEM 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IH LFS NRWE M LK GTTL+VDRY++SGVAFSSAKG+D+EWCK P+ GL
Sbjct: 67 QDDKIHQLFSENRWEAVPSMLEALKNGTTLVVDRYAFSGVAFSSAKGLDLEWCKKPDAGL 126
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
APD+V+YLDIP E A +RG +G ERYE FQ KVA Y+ L+ SW ++DA I+ +
Sbjct: 127 PAPDAVIYLDIPIEAAMKRGDFGNERYETRAFQEKVAAQYKKLQTPSWMMMDARLPIDQL 186
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLW 257
+ + I +V A + P LW
Sbjct: 187 QADIFNIA-SKVIADAQNAPVGKLW 210
>gi|225716352|gb|ACO14022.1| Thymidylate kinase [Esox lucius]
Length = 212
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 151/208 (72%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D+ GKT+QC++L+ L E+ RFP+RTT +GQ+I++YL +S+L+
Sbjct: 5 RGALIVLEGVDKAGKTTQCNKLIQALLENEQPAEMMRFPERTTMIGQLINSYLEKKSNLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE+ +M+ KL+ G TL+VDRY++SGVAF+SAK G ++WCK P++GL
Sbjct: 65 DHTVHLLFSANRWEQVPLMKEKLEQGITLVVDRYAFSGVAFTSAKPGFTLDWCKNPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD V++L++ P +AA RG +G ERYE FQR V Q + ++++DSS W++I A ++I
Sbjct: 125 PKPDLVMFLNVSPSEAARRGHFGTERYETSVFQRAVQQGFEELMKDSSVNWQVIGASRNI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
EDV +K ++ +T +P LW
Sbjct: 185 EDVHADIKNHTIEAITTAMT-QPIGHLW 211
>gi|260796149|ref|XP_002593067.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
gi|229278291|gb|EEN49078.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
Length = 215
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 148/207 (71%), Gaps = 5/207 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+VLEG+D GKT+QC +L+ L+ G EL RFPDRTT++G +I+ YL N+ L
Sbjct: 4 ARGALIVLEGVDHSGKTTQCMKLVEALKKHGQKAELIRFPDRTTAIGSVINDYLGNKCEL 63
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IHLLFSANRWE ME L GT+LIVDRY+YSGVAF++AKG+D+ + +IGL
Sbjct: 64 HDFAIHLLFSANRWEAVPRMEKLLSEGTSLIVDRYAYSGVAFTAAKGLDMRRLQHSDIGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD V+YL +PPE+AA+R YGGERYE +FQ+KVA+ +++L++ WKI++A Q+IE++
Sbjct: 124 PRPDLVMYLTLPPEEAAKRSEYGGERYEQTDFQKKVAENFKVLQEDDWKILNANQTIEEL 183
Query: 233 EKQLKEIVLDQVT--ACKKGKPFSLLW 257
+ ++ + +T +C +P LW
Sbjct: 184 HTHILQLAKEAITKSSC---QPILPLW 207
>gi|198417043|ref|XP_002128464.1| PREDICTED: similar to deoxythymidylate kinase [Ciona intestinalis]
Length = 209
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EGLDR GKT+QC +L++ L V+L +FPDRTT +G+ I++YL +S+LD
Sbjct: 5 RGALIVVEGLDRSGKTTQCQKLITALNEKNQKVKLLKFPDRTTEIGKTINSYLVKKSNLD 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPEIGL 172
D IHLLFSANRWEKRS M L G TLIVDRY+YSG AFS+A KG++++WCK+P+ GL
Sbjct: 65 DRAIHLLFSANRWEKRSEMLQDLNDGVTLIVDRYAYSGAAFSAAKKGLELDWCKSPDSGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD VL+L++ AA RGGYG ERYE EFQ+KVA + L+ WK+IDA + + +V
Sbjct: 125 PQPDLVLFLELSTSVAATRGGYGEERYETTEFQKKVALNFHGLKTEEWKVIDAGRDMFEV 184
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLWS 258
+ + V ++ K +P LW+
Sbjct: 185 HQDMLSFV-EKTMEKVKLQPVGTLWT 209
>gi|432853377|ref|XP_004067677.1| PREDICTED: thymidylate kinase-like isoform 1 [Oryzias latipes]
Length = 212
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 147/211 (69%), Gaps = 9/211 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+QC L+ L+ G E RFPDRTT++GQ+ISAYL +S L+
Sbjct: 5 RGALIVLEGVDRAGKTTQCKMLVQALQKSGRPAEAMRFPDRTTTIGQLISAYLEKKSELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE M+ KL+ G TL+VDRY++SG AF+SAK G +EWC P++GL
Sbjct: 65 DHTVHLLFSANRWELVPTMKKKLEQGITLVVDRYAFSGAAFTSAKPGFSLEWCMKPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RDSS--WKIIDACQSI 229
PD V++L + P +AA RG +G ERYE FQ V Q +++L +DSS W++IDA +S+
Sbjct: 125 PKPDLVMFLQLSPAEAALRGQFGVERYETRVFQNAVQQKFELLMKDSSVNWQVIDASKSV 184
Query: 230 EDVEKQLKEIVLDQVTACKKGK--PFSLLWS 258
E+V ++I + + A K + P LW+
Sbjct: 185 EEVH---RDITVHSLNAINKAEDIPLGQLWT 212
>gi|390346478|ref|XP_789676.2| PREDICTED: thymidylate kinase-like [Strongylocentrotus purpuratus]
gi|390358306|ref|XP_784160.2| PREDICTED: thymidylate kinase-like [Strongylocentrotus purpuratus]
Length = 214
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVV EG DR GK++QC +L+ + G EL RFP+R+T +G++I +YL N +
Sbjct: 3 RGALVVFEGCDRSGKSTQCKKLVESMLEKGMKAELMRFPERSTVIGKLIDSYLKNSKDVQ 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
D+ IHLLFSANRWE + ME KL G TL+VDRY+YSGVAF++AK GI + WCK P++GL
Sbjct: 63 DNAIHLLFSANRWELKPEMERKLNEGVTLVVDRYAYSGVAFTAAKEGISLNWCKRPDVGL 122
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD VL+L + E A +RGG+G ERYE E Q +VA+ ++ L+++ W+II+A QS+EDV
Sbjct: 123 PLPDLVLFLKVSSEAAEKRGGFGEERYEKSEIQARVAKNFEKLQENDWEIINADQSMEDV 182
Query: 233 EKQLKEIV 240
+KQ++ +V
Sbjct: 183 QKQIQNVV 190
>gi|422933562|ref|YP_007003686.1| thymidylate kinase [Cyprinid herpesvirus 1]
gi|386685968|gb|AFJ20321.1| thymidylate kinase [Cyprinid herpesvirus 1]
Length = 232
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 144/209 (68%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVVLEG+DR GKT+QC +L+ L+G G EL RFPDRTT++G+MIS+YL +++ LD
Sbjct: 21 RGALVVLEGVDRAGKTTQCQKLVEALQGSGRPAELMRFPDRTTTIGKMISSYLESKTELD 80
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE +M+ KL+ GT+L++DRY++SGVAFSSAK + +EWC P++GL
Sbjct: 81 DHAVHLLFSANRWELVPLMKQKLERGTSLVLDRYAFSGVAFSSAKPDMPVEWCMGPDVGL 140
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS--WKIIDACQS 228
PD V++L + P A RGGYG ERYE FQ KV Q + L DSS W+++DA ++
Sbjct: 141 PKPDLVMFLSLNPTAAETRGGYGLERYETNTFQSKVEQRFSTLIQEDSSVDWRVVDAGRT 200
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+E+V + + + P LW
Sbjct: 201 VEEVHSDIMGLCTGVFESGALSTPLGKLW 229
>gi|428184205|gb|EKX53061.1| hypothetical protein GUITHDRAFT_64796 [Guillardia theta CCMP2712]
Length = 212
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 146/212 (68%), Gaps = 11/212 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEGLDR GK++Q RL+ L +G FPDRTT+VG +I+ YL + LD
Sbjct: 4 RGALIVLEGLDRSGKSTQVIRLVEKLVSMGKKASKMNFPDRTTTVGGLINEYLQSGKDLD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG-IDIEWCKAPEIGL 172
D IHLLFSANRWE + +L +G TLIVDRY+YSGVAFS+AKG +DIEWCK P+ GL
Sbjct: 64 DAVIHLLFSANRWEATRSIRDRLSSGETLIVDRYAYSGVAFSAAKGTLDIEWCKGPDRGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
APD V+YLD+ + A +RGGYG ERYE EFQ+KV C++ L + W+ +DA +++
Sbjct: 124 PAPDCVIYLDVSSDVAKQRGGYGEERYEKEEFQKKVRTCFEALMSQEPAMWRRVDANKTM 183
Query: 230 EDVEKQLKEI---VLDQVTACKKGKPFSLLWS 258
++V ++++ I ++DQVT KP LW+
Sbjct: 184 DEVTEEIEGIATKIVDQVT----DKPIGSLWT 211
>gi|159467731|ref|XP_001692045.1| hypothetical protein CHLREDRAFT_128562 [Chlamydomonas reinhardtii]
gi|158278772|gb|EDP04535.1| predicted protein [Chlamydomonas reinhardtii]
Length = 214
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 139/207 (67%), Gaps = 3/207 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EG DRCGKT+QCS+++ L+ G +WRFPDR+TS+G I+AYLSNQS LD
Sbjct: 8 RGALIVFEGGDRCGKTTQCSKMVERLKSQGVDAVMWRFPDRSTSIGAAINAYLSNQSQLD 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPEI 170
D IH+LF ANR EKR M L GTTL++DRYSYSGVA+++AKG+ I++CK+ E+
Sbjct: 68 DAVIHMLFVANRLEKRDEMLRLLAGGTTLVLDRYSYSGVAYTAAKGVPHLSIDYCKSLEV 127
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIE 230
L A D V+++ + E A RGGYG ERYE +EFQ +V + + LRD W IDA +I+
Sbjct: 128 VLPAADLVVHMSMSAEATAARGGYGEERYEKVEFQARVMEAFGQLRDERWAAIDAAGTID 187
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
+ +Q+ +V V +G LW
Sbjct: 188 AIHEQVAAVVEPVVRRTLQGAVLGRLW 214
>gi|391340461|ref|XP_003744559.1| PREDICTED: thymidylate kinase-like [Metaseiulus occidentalis]
Length = 208
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 136/196 (69%), Gaps = 1/196 (0%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+VLEGLDR GK++Q L+ L G EL FPDRTT +G++IS YLS+ L
Sbjct: 3 TRGALIVLEGLDRTGKSTQARTLVKNLNSKGILAELQIFPDRTTQIGKVISEYLSHARDL 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIG 171
DD IHLLFSANRWEK++ M +KL+ G +L+VDRY++SGVAFSSAK G+ EWC+ P++G
Sbjct: 63 DDRAIHLLFSANRWEKKNAMVSKLEKGISLVVDRYAFSGVAFSSAKPGLSQEWCRQPDVG 122
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIED 231
LL PD V +L PE +RGGYG ERYE++EFQ++VA Y L D SW +DA S E
Sbjct: 123 LLKPDVVFFLTADPETLKQRGGYGEERYENVEFQKRVAAEYSELEDPSWIRVDATWSAER 182
Query: 232 VEKQLKEIVLDQVTAC 247
+ + L V + + A
Sbjct: 183 IAEHLLTTVENTMRAL 198
>gi|291415046|ref|XP_002723764.1| PREDICTED: thymidylate kinase isoform 1 [Oryctolagus cuniculus]
Length = 212
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L++ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ ++ KL G TL+VDRY++SGVAF+SAK +EWCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPFIKEKLSQGVTLVVDRYAFSGVAFTSAKENFSLEWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + +AA RG +G ERYE FQ + Q + Q++RD S WK++DA +SI
Sbjct: 125 PRPDLVLFLQLKLAEAASRGEFGCERYESRAFQERALQGFHQLMRDPSLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
EDV ++++ + D + + + +P LW
Sbjct: 185 EDVHEEIRALSEDAILSAAQ-RPLGELW 211
>gi|393221892|gb|EJD07376.1| thymidylate kinase [Fomitiporia mediterranea MF3/22]
Length = 222
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 144/213 (67%), Gaps = 8/213 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V+EGLDR GK++Q + LLS L+ +L +FPDRTT +G+MI AYL ++S +D
Sbjct: 6 RGAFIVIEGLDRSGKSTQAASLLSRLQQSNIPTKLMKFPDRTTPIGKMIDAYLRSESDID 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE + +E L GT +I DRY++SGVAFS++KG+ +WC+AP++GL
Sbjct: 66 DRAIHLLFSANRWELVTSIERALNEGTIIICDRYAFSGVAFSASKGLPFDWCQAPDVGLP 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML------RDS-SWKIIDAC 226
APD L+LDI PEKA +RGGYG ERYE E QR+V + + + RD +W IDA
Sbjct: 126 APDLTLFLDISPEKARQRGGYGEERYEKEEMQRRVREVFSNIAADARRRDEYTWVTIDAG 185
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLLWSC 259
+ +EDV+ + I ++Q+ KP LW+
Sbjct: 186 KELEDVKDDIW-IQVEQLLGSGDLKPIRRLWTS 217
>gi|109101748|ref|XP_001094132.1| PREDICTED: thymidylate kinase-like isoform 2 [Macaca mulatta]
Length = 212
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE+ +++ KL G TLIVDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG YG ERYE+ FQ + QC+ Q++RD++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQLMRDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIHTATE-KPLGELW 211
>gi|261335952|emb|CBH09285.1| putative thymidylate kinase [Heliconius melpomene]
Length = 208
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 139/204 (68%), Gaps = 1/204 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V+EG+DR GKT+Q +L+ L+ S E FPDR T +G++I++YL++++ L
Sbjct: 5 RGAFIVIEGVDRTGKTTQAKKLVESLKNKQVSAEYMNFPDRKTDIGEVINSYLTSKNDLS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+ IHLLFSANRWEK + ++ KL G T+IVDRY +SGVA+S+AKG+D+ WCK+P+ GL
Sbjct: 65 NEAIHLLFSANRWEKVNYIKEKLLNGITVIVDRYCFSGVAYSAAKGLDLSWCKSPDAGLP 124
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVE 233
PD V + +P E +R G+G ERYE EFQ+KV Y L++ +W ++DA +S+E +
Sbjct: 125 KPDKVFFFTLPLEHVQQRNGFGSERYEVPEFQKKVTNTYMKLKEDNWDMLDASRSLEVIH 184
Query: 234 KQLKEIVLDQVTACKKGKPFSLLW 257
K+L E VL V + KP +W
Sbjct: 185 KELVEKVLSVVDSV-DNKPIEKIW 207
>gi|355565357|gb|EHH21846.1| hypothetical protein EGK_05000, partial [Macaca mulatta]
Length = 211
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 4 RGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE+ +++ KL G TLIVDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 64 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG YG ERYE+ FQ + QC+ Q++RD++ WK++DA +SI
Sbjct: 124 PKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQLMRDTTLNWKMVDASKSI 183
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 184 EAVHEDIRVLSEDAIHTATE-KPLGELW 210
>gi|313229292|emb|CBY23878.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 141/208 (67%), Gaps = 4/208 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL++ EG+DR GK++Q R+ + + G +V L RFP+RT+ +GQ I+ YL + + L
Sbjct: 2 ARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSNDL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IHLLFSANRWE + + GT+++VDRY++SGVAF++AKG+D+EWCK P+ GL
Sbjct: 62 SDQAIHLLFSANRWEHAQSILNYMNNGTSVLVDRYAFSGVAFTAAKGLDLEWCKNPDRGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDACQSI 229
PD VL LD+ E A +RGG+G ERYE +EFQR+V + Y LR+ WKIIDA S+
Sbjct: 122 PKPDLVLQLDVDEETAKKRGGFGEERYEKVEFQRQVRKLYSQLREEHSDIWKIIDASASV 181
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+++ L+ V + + +C + K LW
Sbjct: 182 DELTPALQNHVDETIKSC-QNKDIEKLW 208
>gi|402889934|ref|XP_003908252.1| PREDICTED: thymidylate kinase [Papio anubis]
Length = 233
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 145/208 (69%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 26 RGALIVLEGMDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 85
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE+ +++ KL G TLIVDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 86 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 145
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC-YQMLRDSS--WKIIDACQSI 229
PD +L+L + AA+RG YG ERYE+ FQ + QC YQ++RD++ WK++DA +SI
Sbjct: 146 PKPDLILFLQLQLADAAKRGAYGHERYENRAFQERALQCFYQLMRDTTLNWKMVDASKSI 205
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + + + D + + KP LW
Sbjct: 206 EAVHEDICALSEDAIRTATE-KPLGELW 232
>gi|121718363|ref|XP_001276187.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
gi|119404385|gb|EAW14761.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
Length = 221
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 141/207 (68%), Gaps = 11/207 (5%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+GN+ RGAL+V+EGLDR GK+SQC RL L+ G+SV+ RFPDRTT +GQ+I+ YL
Sbjct: 1 MGNMQKRGALIVVEGLDRAGKSSQCERLRDSLQASGYSVKYIRFPDRTTPIGQLINGYLQ 60
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEW 164
QSHLDDH+IHLLFSANRWE +E + G T+IVDRYSYSG +S+AKG + +EW
Sbjct: 61 GQSHLDDHSIHLLFSANRWEIARTIENDIANGVTVIVDRYSYSGAVYSAAKGNQNLSLEW 120
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSW 220
PEIGL PD L+L I PE+AA+RGG+G ERYE+ + Q +V + +Q L
Sbjct: 121 AWQPEIGLPQPDICLFLRISPEEAAKRGGFGIERYENEKMQSRVRELFQTLFKLQLGDYI 180
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTAC 247
++DA ++++ V + +L VTAC
Sbjct: 181 HMVDAGRTLDAVSQD----ILQTVTAC 203
>gi|126338564|ref|XP_001362301.1| PREDICTED: thymidylate kinase-like isoform 1 [Monodelphis
domestica]
Length = 212
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++ +YL + +++
Sbjct: 5 RGALIVLEGMDRAGKTTQGRKLVAALLQSGHPAELLRFPERSTEIGKLLGSYLEKKKNME 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSRGVTLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQ-CYQMLRDSS--WKIIDACQSI 229
PD +L+L + +AA+RG +G ERYE+ FQ K Q YQ+++D S WK IDA ++I
Sbjct: 125 PKPDVILFLQLSSVEAAKRGDFGNERYENNTFQEKALQRFYQLMKDDSLNWKTIDASKNI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
ED+ K++ + + + ++ P LW
Sbjct: 185 EDLHKEIYSLSEETIQMVQE-MPVGELW 211
>gi|313246105|emb|CBY35059.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 141/208 (67%), Gaps = 4/208 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL++ EG+DR GK++Q R+ + + G +V L RFP+RT+ +GQ I+ YL + + L
Sbjct: 2 ARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSNDL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IHLLFSANRWE + + GT+++VDRY++SGVAF++AKG+D+EWCK P+ GL
Sbjct: 62 SDQAIHLLFSANRWEHAQSILNYMNNGTSVLVDRYAFSGVAFTAAKGLDLEWCKNPDRGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDACQSI 229
PD VL LD+ E A +RGG+G ERYE +EFQR+V + Y LR+ WKIIDA S+
Sbjct: 122 PKPDLVLQLDVDEETAKKRGGFGEERYEKVEFQRQVRKLYSQLREEHSDIWKIIDASGSV 181
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+++ L+ V + + +C + K LW
Sbjct: 182 DELTPALQTHVDETIKSC-QNKDIEKLW 208
>gi|449297760|gb|EMC93777.1| hypothetical protein BAUCODRAFT_210361 [Baudoinia compniacensis
UAMH 10762]
Length = 219
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 140/209 (66%), Gaps = 9/209 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+V EGLDR GK++QC RL+S+L GH + RFP+RTT +GQMI+ YLS + +
Sbjct: 5 RGTLIVFEGLDRSGKSTQCERLVSHLRQEGHDAQHMRFPNRTTPIGQMINNYLSGLAQTE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH IHLLFSANRWE + +E + GTT+++DRY YSG+A+++AKG +D+ WC+ PE+
Sbjct: 65 DHVIHLLFSANRWESAAEIERLISEGTTVVIDRYYYSGMAYTAAKGNPDMDLNWCRHPEV 124
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-----SSWKIIDA 225
GL PD L+LD+ E A RGGYG ERYE E Q +V + ++ +RD S ++DA
Sbjct: 125 GLPRPDLCLFLDVSTEVAMSRGGYGAERYEKREMQDRVRELFRDMRDHHDERSDIVLVDA 184
Query: 226 CQSIEDVEKQLKEIV-LDQVTACKKGKPF 253
+SIEDV ++ ++V L K G+P
Sbjct: 185 NRSIEDVAAEINDLVGLTMQQVAKSGQPL 213
>gi|119113986|ref|XP_314179.3| AGAP005260-PA [Anopheles gambiae str. PEST]
gi|116128380|gb|EAA09514.4| AGAP005260-PA [Anopheles gambiae str. PEST]
Length = 211
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 132/205 (64%), Gaps = 2/205 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEG DR GKT+QC L+ L + + FPDR+T GQ+I+ YL+ +
Sbjct: 8 RGAFIVLEGCDRTGKTTQCKTLVDKLMQVNIRAQYMNFPDRSTQCGQLINGYLTRKDDFT 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLF+ NRWE+ ME LKAG LIVDRYSYSGVAFSSAKG+D+EWCKAPE GLL
Sbjct: 68 DEGIHLLFTLNRWERMKEMEKLLKAGVNLIVDRYSYSGVAFSSAKGLDMEWCKAPESGLL 127
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKIIDACQSIEDV 232
PD V+ L + + A RGG+G ERYE FQ+KV + Y ML+D WK IDA ++ +DV
Sbjct: 128 KPDLVILLTLSMDALARRGGFGDERYEVAGFQKKVIERYGMLKDDRYWKAIDADKTFDDV 187
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLW 257
L E VL + KP LW
Sbjct: 188 TAVLYEEVLRAIEHSGD-KPLEKLW 211
>gi|296206035|ref|XP_002750035.1| PREDICTED: thymidylate kinase isoform 1 [Callithrix jacchus]
Length = 212
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L LGH EL RFP+R+T +G+++S+YL +S L+
Sbjct: 5 RGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSDLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL++DRY++SGVAFS AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVMDRYAFSGVAFSGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+R +G ERYE+ FQ + QC+ Q++RD++ WK++DA +SI
Sbjct: 125 PRPDLVLFLQLQLADAAKRSAFGHERYENGAFQERALQCFHQLMRDTTVNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + + + D + + KP LW
Sbjct: 185 EAVHEDILVLAEDAIRTATE-KPLGELW 211
>gi|389739204|gb|EIM80398.1| thymidylate kinase [Stereum hirsutum FP-91666 SS1]
Length = 237
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 140/221 (63%), Gaps = 16/221 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGA +V+EGLDR GK++Q + LL L+ V+ +FPDR T +GQMI +YL ++S L
Sbjct: 6 SRGAFIVIEGLDRSGKSTQAATLLERLQSRNIPVKFHKFPDRVTPIGQMIDSYLRSKSDL 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG--IDIEWCKAPEI 170
DDH IHLLFSANRWE + +E L +GT ++ DRY++SG+AF+++K I EWC+ P+I
Sbjct: 66 DDHVIHLLFSANRWELAATVEQTLNSGTHIVCDRYAFSGIAFTASKPSQIPFEWCRTPDI 125
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS----------- 219
L APD +LYLDI P KA ERGGYG ERYE E Q +V + Y+ +R+ +
Sbjct: 126 SLPAPDLILYLDISPNKAKERGGYGEERYEQEEMQTRVREVYRRMREETMAVGSNRESEN 185
Query: 220 ---WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
W IDA +S+EDV K++ V V KP LW
Sbjct: 186 RPQWVEIDAGRSVEDVGKEIWIHVEPFVQPSGISKPIGRLW 226
>gi|157817466|ref|NP_001100395.1| thymidylate kinase [Rattus norvegicus]
gi|149037469|gb|EDL91900.1| deoxythymidylate kinase (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 212
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 149/208 (71%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+QC RL++ L GH EL RFP+R+T +G+++S+YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++AKL G TL++DRY++SGVAF+SAK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTSAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD +L+L + AA RG +G ERYE FQ +V C+Q L ++ +WK++DA +SI
Sbjct: 125 PKPDLILFLQLQLLDAASRGEFGLERYETGTFQEQVLLCFQQLMSEKNLNWKVVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
EDV ++++ + D + + +P LW
Sbjct: 185 EDVHEEIRALSEDAIQNAAQ-RPLEELW 211
>gi|259480991|tpe|CBF74121.1| TPA: thymidylate and uridylate kinase (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 223
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 141/218 (64%), Gaps = 7/218 (3%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G RGAL+V+EGLDR GK+SQC L + L+ G V+ RFPDRTT +G++I YL
Sbjct: 5 GTHGGRGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPDRTTPIGKLIDGYLRG 64
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWC 165
QSHLDDH+IHLLFSANRWE +EA + GT++I+DRYSYSG +S+AK + +EW
Sbjct: 65 QSHLDDHSIHLLFSANRWEVAQSIEADIANGTSVIIDRYSYSGAVYSAAKANPSLSLEWA 124
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWK 221
PE+GL PD L+L I PE+AA+RGG+GGERYE+ Q +V + + + R + +
Sbjct: 125 WQPEVGLPKPDLCLFLSISPEEAAKRGGFGGERYENEAMQTRVRELFNTIFDLQRATDIR 184
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWSC 259
IIDA +S+ +V + + +V +++ P L S
Sbjct: 185 IIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 222
>gi|255955699|ref|XP_002568602.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590313|emb|CAP96490.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 223
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 135/194 (69%), Gaps = 5/194 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EGLDR GK+SQC L L GH V+ RFPDRTT +G++I +YL SH D
Sbjct: 11 RGALIVVEGLDRAGKSSQCEMLRDSLSRQGHVVKYIRFPDRTTPIGKLIDSYLRGSSHQD 70
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH+IHLLFSANRWE +E + GTT+IVDRYSYSGV +S+AK + +EW PEI
Sbjct: 71 DHSIHLLFSANRWEIAKSIEEDIANGTTVIVDRYSYSGVVYSAAKANPTLSLEWAWRPEI 130
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQS 228
GL PD L+L I PE+AA+RGG+G ERYE+ E Q +V + +Q + + IIDA +S
Sbjct: 131 GLPRPDICLFLSISPEEAAKRGGFGAERYENGEMQTRVRELFQTIFEKQQDVSIIDAGKS 190
Query: 229 IEDVEKQLKEIVLD 242
IE+V ++++ +V D
Sbjct: 191 IEEVSQEIRGVVAD 204
>gi|195383450|ref|XP_002050439.1| GJ22153 [Drosophila virilis]
gi|194145236|gb|EDW61632.1| GJ22153 [Drosophila virilis]
Length = 211
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N + RGAL+V EG DRCGKT+Q +L L G G FPDR+T++G +I+ YL N
Sbjct: 2 NANKRGALIVFEGCDRCGKTTQNRQLFELLTGKGVDTMQTNFPDRSTAIGNVINHYLQNN 61
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L D IHLLFSANRWE+ + ++ L AGTT+I DRY+YSGVA+S AKG+D WC APE
Sbjct: 62 QELSDEVIHLLFSANRWERMNSIKKDLLAGTTVICDRYAYSGVAYSVAKGLDFNWCWAPE 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS-WKIIDAC 226
IGLL PD+V YL P++ RG YG ERYE L+FQRKV Q + +DSS W +A
Sbjct: 122 IGLLKPDAVFYLKATPDELTTRGNYGEERYEKLDFQRKVGQIFDRFSEKDSSYWHTFEAS 181
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+S +++ Q+ IV +++ KP L
Sbjct: 182 KSQQELHAQIA-IVAEKIVMQSAEKPLGKL 210
>gi|344299094|ref|XP_003421223.1| PREDICTED: thymidylate kinase-like [Loxodonta africana]
Length = 212
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 146/209 (69%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L++ L GH EL RFP+R+T +G+++++YL ++ ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVAALCAAGHRAELLRFPERSTEIGKLLNSYLEKKNEVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ ++ KL G TLIVDRY++SGVAF++AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIRNKLDQGVTLIVDRYAFSGVAFTAAKENFSVDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSW--KIIDACQSI 229
PD VL+L + AA RGG+G ERYE FQ + C+ Q+++D S K IDA +S+
Sbjct: 125 PRPDLVLFLQLQLADAARRGGFGQERYEDRAFQERALHCFQQLMQDPSLDCKTIDASRSV 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
EDV K+++ + D + A + P LW+
Sbjct: 185 EDVHKEVRALSEDAIRAAAQ-TPLGQLWT 212
>gi|291900|gb|AAA21719.1| thymidylate kinase [Homo sapiens]
Length = 212
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLKKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V ++L+ + D + + KP LW
Sbjct: 185 EAVHEELRVLSEDAIRTATE-KPLGELW 211
>gi|357608814|gb|EHJ66161.1| putative thymidylate kinase [Danaus plexippus]
Length = 210
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EG+DR GKT+QC L+ L+ + FPDRT+ +G++I+ YL+ ++ +
Sbjct: 5 RGALIVIEGVDRTGKTTQCRNLVEGLKNKDVAAMYSNFPDRTSEIGKVINHYLTRKTEMS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D TIHLLFSANRWEK + +L+ GTTLI+DRY YSGVAFS AKG+DI WCK ++GL
Sbjct: 65 DETIHLLFSANRWEKCGEIIKQLETGTTLIIDRYCYSGVAFSGAKGLDINWCKNSDVGLP 124
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVE 233
PD V +L++P E A +R G+G ERYE FQ+KV Y L+D W I+DA + ++ ++
Sbjct: 125 KPDKVFFLNMPLETAMQRNGFGNERYEVKNFQKKVLDVYMQLKDEKWDILDANRPMDIIQ 184
Query: 234 KQLKEIVLDQVTACKKGKPFSLLW 257
+L + L+ V +P +W
Sbjct: 185 DELLQKTLEVVKNV-SNEPLDKMW 207
>gi|443429410|gb|AGC92695.1| thymidylate kinase-like protein [Heliconius erato]
Length = 212
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V+EG+DR GKT+Q +L+ L+ E FPDR T +G++I++YL++++ L
Sbjct: 9 RGAFIVIEGVDRTGKTTQAKKLVESLKNKQVPAEYMNFPDRKTDIGEVINSYLTSKNDLS 68
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+ IHLLFSANRWEK + ++ K+ G T+IVDRY +SGVA+S+AKG+D+ WCK+P+ GL
Sbjct: 69 NEAIHLLFSANRWEKVNYVKEKILNGVTVIVDRYCFSGVAYSAAKGLDLSWCKSPDAGLP 128
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVE 233
PD V + +P E +R G+G ERYE EFQ+KV Y L++ +W ++DA +S+E +
Sbjct: 129 KPDKVFFFTLPLEHVQQRNGFGSERYEVPEFQKKVTATYMKLKEDNWDMLDASRSLEVIH 188
Query: 234 KQLKEIVLDQVTACKKGKPFSLLW 257
K+L E VL V KP +W
Sbjct: 189 KELVEKVLSVVDGV-DNKPIEKIW 211
>gi|255033420|gb|ACT99401.1| unknown [Lactuca sativa]
gi|255033422|gb|ACT99402.1| unknown [Lactuca sativa]
gi|255033470|gb|ACT99426.1| unknown [Lactuca sativa]
gi|255033472|gb|ACT99427.1| unknown [Lactuca sativa]
gi|255033478|gb|ACT99430.1| unknown [Lactuca sativa]
gi|255033490|gb|ACT99436.1| unknown [Lactuca sativa]
gi|255033498|gb|ACT99440.1| unknown [Lactuca sativa]
gi|255033506|gb|ACT99444.1| unknown [Lactuca sativa]
gi|255033510|gb|ACT99446.1| unknown [Lactuca sativa]
gi|255033524|gb|ACT99453.1| unknown [Lactuca sativa]
gi|255033528|gb|ACT99455.1| unknown [Lactuca sativa]
gi|255033530|gb|ACT99456.1| unknown [Lactuca sativa]
Length = 129
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 108/119 (90%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G I +RGAL+VLEGLDR GKTSQ +RLLSYL LG+ VE WRFPDR T+VG+MIS+YL+N
Sbjct: 11 GEIKARGALIVLEGLDRSGKTSQSARLLSYLNNLGYRVESWRFPDRDTAVGKMISSYLTN 70
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
QS LDDHTIHLLFSANRWEKRS+MEAKLK+G +LIVDRYSYSGVAFSSAKG+DIEWCKA
Sbjct: 71 QSQLDDHTIHLLFSANRWEKRSLMEAKLKSGISLIVDRYSYSGVAFSSAKGLDIEWCKA 129
>gi|417408676|gb|JAA50878.1| Putative thymidylate kinase/adenylate kinase, partial [Desmodus
rotundus]
Length = 210
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 148/209 (70%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++++YL +S ++
Sbjct: 3 RGALIVLEGMDRAGKSTQSGKLVEALCADGHRAELLRFPERSTEIGKLLNSYLKKKSEVE 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE+ +M+ KL G TLIVDRY++SGVAF+SAK + WCK P++GL
Sbjct: 63 DHAVHLLFSANRWEQVPLMKEKLSQGVTLIVDRYAFSGVAFTSAKEHFCLHWCKQPDMGL 122
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L + E+A +RG +G ERYE+ +FQ +V Q + L R +WK+++A +SI
Sbjct: 123 PKPDLVMFLQLQLEEAVKRGEFGCERYENRDFQERVLQRFHQLMGDRTLNWKMVNASRSI 182
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
EDV K+++ + + + A + KP LW+
Sbjct: 183 EDVHKEIRMLSEEAIQATAQ-KPLEELWA 210
>gi|255033412|gb|ACT99397.1| unknown [Lactuca sativa]
gi|255033414|gb|ACT99398.1| unknown [Lactuca sativa]
gi|255033416|gb|ACT99399.1| unknown [Lactuca sativa]
gi|255033418|gb|ACT99400.1| unknown [Lactuca sativa]
gi|255033424|gb|ACT99403.1| unknown [Lactuca sativa]
gi|255033426|gb|ACT99404.1| unknown [Lactuca sativa]
gi|255033428|gb|ACT99405.1| unknown [Lactuca sativa]
gi|255033430|gb|ACT99406.1| unknown [Lactuca sativa]
gi|255033434|gb|ACT99408.1| unknown [Lactuca sativa]
gi|255033436|gb|ACT99409.1| unknown [Lactuca sativa]
gi|255033440|gb|ACT99411.1| unknown [Lactuca sativa]
gi|255033442|gb|ACT99412.1| unknown [Lactuca sativa]
gi|255033444|gb|ACT99413.1| unknown [Lactuca sativa]
gi|255033446|gb|ACT99414.1| unknown [Lactuca sativa]
gi|255033454|gb|ACT99418.1| unknown [Lactuca sativa]
gi|255033466|gb|ACT99424.1| unknown [Lactuca sativa]
gi|255033468|gb|ACT99425.1| unknown [Lactuca sativa]
gi|255033476|gb|ACT99429.1| unknown [Lactuca sativa]
gi|255033482|gb|ACT99432.1| unknown [Lactuca sativa]
gi|255033484|gb|ACT99433.1| unknown [Lactuca sativa]
gi|255033492|gb|ACT99437.1| unknown [Lactuca serriola]
gi|255033494|gb|ACT99438.1| unknown [Lactuca sativa]
gi|255033500|gb|ACT99441.1| unknown [Lactuca sativa]
gi|255033502|gb|ACT99442.1| unknown [Lactuca sativa]
gi|255033504|gb|ACT99443.1| unknown [Lactuca sativa]
gi|255033508|gb|ACT99445.1| unknown [Lactuca sativa]
gi|255033512|gb|ACT99447.1| unknown [Lactuca sativa]
gi|255033514|gb|ACT99448.1| unknown [Lactuca sativa]
gi|255033516|gb|ACT99449.1| unknown [Lactuca sativa]
gi|255033518|gb|ACT99450.1| unknown [Lactuca sativa]
gi|255033520|gb|ACT99451.1| unknown [Lactuca sativa]
gi|255033522|gb|ACT99452.1| unknown [Lactuca sativa]
gi|255033526|gb|ACT99454.1| unknown [Lactuca sativa]
gi|255033532|gb|ACT99457.1| unknown [Lactuca serriola]
gi|255033536|gb|ACT99459.1| unknown [Lactuca sativa]
Length = 129
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 108/119 (90%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G I +RGAL+VLEGLDR GKTSQ +RLLSYL LG+ VE WRFPDR T+VG+MIS+YL+N
Sbjct: 11 GEIKARGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTN 70
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
QS LDDHTIHLLFSANRWEKRS+MEAKLK+G +LIVDRYSYSGVAFSSAKG+DIEWCKA
Sbjct: 71 QSQLDDHTIHLLFSANRWEKRSLMEAKLKSGISLIVDRYSYSGVAFSSAKGLDIEWCKA 129
>gi|431912281|gb|ELK14418.1| Thymidylate kinase [Pteropus alecto]
Length = 212
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL + ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALRAAGHCAELLRFPERSTEIGKLLSSYLEKKREVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLGQGVTLVVDRYAFSGVAFTSAKENFHLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD V++L + AA RG +G ERYE+ FQ +V Q + Q++RD + WK++DA +SI
Sbjct: 125 PKPDLVVFLQLQLAVAAARGEFGRERYENRAFQERVLQRFHQLMRDPALNWKVVDASRSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
EDV ++++ + D + A + +P LW
Sbjct: 185 EDVHEEIRVLSEDIIWAATQ-QPLGELW 211
>gi|255033474|gb|ACT99428.1| unknown [Lactuca sativa]
Length = 129
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 108/119 (90%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G I +RGAL+VLEGLDR GKTSQ +RLLSYL LG+ VE WRFPDR T+VG+MIS+YL+N
Sbjct: 11 GEIKARGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTN 70
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
QS LDDHTIHLLFSANRWEKRS+MEAKLK+G +LIVDRYSYSGVAFSSAKG+DIEWCKA
Sbjct: 71 QSQLDDHTIHLLFSANRWEKRSLMEAKLKSGISLIVDRYSYSGVAFSSAKGLDIEWCKA 129
>gi|14488796|pdb|1E2D|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
gi|14488797|pdb|1E2E|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
Monophosphate, Adenosine Diphosphate,A Magnesium-Ion And
Alf3
gi|14488798|pdb|1E2F|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
gi|14488799|pdb|1E2G|A Chain A, Human Thymidylate Kinase Complexed With Adp, Tdp And A
Magnesium-Ion
gi|14488800|pdb|1E2Q|A Chain A, Human Thymidylate Kinase Complexed With Tp5a And A
Magnesium-Ion
gi|16975361|pdb|1E99|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Adp
gi|16975362|pdb|1E9A|A Chain A, Human Thymidylate Kinase Complexed With The Bisubstrate
Inhibitor Aztp5a
gi|16975363|pdb|1E9B|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Appnp
gi|29726714|pdb|1NMX|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
And Adp
gi|29726716|pdb|1NMZ|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Nh2tmp
And Appnhp
gi|29726717|pdb|1NN0|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
And Adp
gi|29726718|pdb|1NN1|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
And Appnhp
gi|29726719|pdb|1NN3|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
Adp
gi|29726720|pdb|1NN5|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
Appnhp
Length = 215
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 127
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 128 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 187
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 188 EAVHEDIRVLSEDAIATATE-KPLGELW 214
>gi|145242644|ref|XP_001393895.1| thymidylate kinase [Aspergillus niger CBS 513.88]
gi|134078448|emb|CAK40391.1| unnamed protein product [Aspergillus niger]
gi|350640181|gb|EHA28534.1| hypothetical protein ASPNIDRAFT_56895 [Aspergillus niger ATCC 1015]
Length = 224
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 7/196 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EGLDR GK+SQC L L+ LGHSV+ RFPDRTT +G++I YL QS LD
Sbjct: 10 RGALIVVEGLDRAGKSSQCESLHQKLQDLGHSVKYIRFPDRTTPIGKLIDGYLRGQSQLD 69
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH+IHLLFSANRWE +E + AG T+IVDRYSYSG +S+AK + +EW PEI
Sbjct: 70 DHSIHLLFSANRWEIARAIEEDIAAGITVIVDRYSYSGAVYSAAKANPTLSLEWAWTPEI 129
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDAC 226
GL PD L+L I P++AA+RGG+G ERYE+ Q +V + +Q + R ++IDA
Sbjct: 130 GLPQPDLCLFLSIAPDEAAKRGGFGAERYENETMQSRVRELFQTIFRVQRSGDIRVIDAG 189
Query: 227 QSIEDVEKQLKEIVLD 242
+S E V +++ V+D
Sbjct: 190 RSFEAVSVDIEKSVVD 205
>gi|29726715|pdb|1NMY|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
And Appnhp
Length = 209
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 2 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 62 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 122 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 181
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 182 EAVHEDIRVLSEDAIATATE-KPLGELW 208
>gi|296488737|tpg|DAA30850.1| TPA: thymidylate kinase [Bos taurus]
gi|440901287|gb|ELR52262.1| Thymidylate kinase [Bos grunniens mutus]
Length = 212
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 147/209 (70%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE +M+ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEHVPLMKEKLSQGVTLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD V++L + +AA RG +G ERYE FQ++ Q + Q+L D S WK+++A +SI
Sbjct: 125 PKPDLVVFLQLQLAEAAARGEFGRERYESGPFQQRALQRFQQLLADPSLPWKMVNASRSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
EDV ++++ + D + A +P LW+
Sbjct: 185 EDVHREIRALSEDAIRAAAH-RPLGQLWA 212
>gi|60831889|gb|AAX36988.1| deoxythymidylate kinase [synthetic construct]
Length = 213
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>gi|33303857|gb|AAQ02442.1| deoxythymidylate kinase [synthetic construct]
gi|54696972|gb|AAV38858.1| deoxythymidylate kinase (thymidylate kinase) [synthetic construct]
Length = 213
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>gi|42544174|ref|NP_036277.2| thymidylate kinase isoform 1 [Homo sapiens]
gi|114584335|ref|XP_001161768.1| PREDICTED: uncharacterized protein LOC744320 isoform 3 [Pan
troglodytes]
gi|397483839|ref|XP_003813098.1| PREDICTED: thymidylate kinase [Pan paniscus]
gi|56405325|sp|P23919.4|KTHY_HUMAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|12804775|gb|AAH01827.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gi|49456983|emb|CAG46812.1| DTYMK [Homo sapiens]
gi|62822371|gb|AAY14920.1| unknown [Homo sapiens]
gi|119591690|gb|EAW71284.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_b [Homo
sapiens]
gi|187955102|gb|AAI47007.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gi|187955947|gb|AAI47011.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gi|410208480|gb|JAA01459.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410248952|gb|JAA12443.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410300456|gb|JAA28828.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410330053|gb|JAA33973.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
Length = 212
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>gi|359545626|pdb|2XX3|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Butenyl
Phosphonate Monophosphate And Adp
Length = 232
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 25 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 84
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 85 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 144
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 145 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 204
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 205 EAVHEDIRVLSEDAIRTATE-KPLGELW 231
>gi|119498863|ref|XP_001266189.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
gi|119414353|gb|EAW24292.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
Length = 221
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 137/211 (64%), Gaps = 7/211 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK+SQC RL L+ GHSV+ RFPDRTT +G++IS+YL QS
Sbjct: 6 NRGALIVVEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYLQGQSQA 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPE 169
DDH+IHLLFSANRWE +E + G ++IVDRYSYSG +S+AKG + +EW PE
Sbjct: 66 DDHSIHLLFSANRWEIAKSIEDDIANGISVIVDRYSYSGAVYSAAKGNRNLSLEWAWQPE 125
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDA 225
IGL PD L+L I PE+AA+RGG+G ERYE+ Q +V + +Q L D IDA
Sbjct: 126 IGLPQPDMCLFLRISPEEAAKRGGFGVERYENETMQNRVRELFQTLFDLQQGDYVHTIDA 185
Query: 226 CQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+S + V + + +IV D + P L
Sbjct: 186 GRSFDAVSQDIMKIVTDSIERLDAMGPLKRL 216
>gi|119591691|gb|EAW71285.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_c [Homo
sapiens]
Length = 254
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 148/209 (70%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
E V + ++ + D + + KP LW+
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELWN 212
>gi|358371633|dbj|GAA88240.1| thymidylate kinase [Aspergillus kawachii IFO 4308]
Length = 224
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 135/196 (68%), Gaps = 7/196 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EGLDR GK+SQC L L+ LGHSV+ RFPDRTT +G++I +YL QS LD
Sbjct: 10 RGALIVVEGLDRAGKSSQCESLHQKLQELGHSVKYIRFPDRTTPIGKLIDSYLRGQSQLD 69
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH+IHLLFSANRWE +E + AG T+IVDRYSYSG +S+AK + +EW PEI
Sbjct: 70 DHSIHLLFSANRWEIAQAIEEDIAAGITVIVDRYSYSGAVYSAAKANPTLSLEWAWTPEI 129
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDAC 226
GL PD ++L I P++AA+RGG+G ERYE+ Q +V + +Q + R ++IDA
Sbjct: 130 GLPQPDLCVFLSIAPDEAAKRGGFGAERYENETMQTRVRELFQTIFRVQRSGDIRVIDAG 189
Query: 227 QSIEDVEKQLKEIVLD 242
+S E V +++ V+D
Sbjct: 190 RSFEAVSVDIEKSVVD 205
>gi|297669947|ref|XP_002813145.1| PREDICTED: thymidylate kinase isoform 1 [Pongo abelii]
Length = 212
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + C+ Q++RD++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENRAFQERALWCFHQLMRDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRMLSEDVICTATE-KPLGELW 211
>gi|16975313|pdb|1E9C|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And
Appnp
gi|16975314|pdb|1E9D|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
Aztmp And Adp
gi|16975315|pdb|1E9E|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
Dtmp And Adp
Length = 215
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVA++ AK ++WCK P++GL
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAYTGAKENFSLDWCKQPDVGL 127
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 128 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 187
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + A KP LW
Sbjct: 188 EAVHEDIRVLSEDAI-ATATEKPLKELW 214
>gi|255033432|gb|ACT99407.1| unknown [Lactuca sativa]
gi|255033438|gb|ACT99410.1| unknown [Lactuca sativa]
gi|255033448|gb|ACT99415.1| unknown [Lactuca sativa]
gi|255033450|gb|ACT99416.1| unknown [Lactuca sativa]
gi|255033452|gb|ACT99417.1| unknown [Lactuca sativa]
gi|255033456|gb|ACT99419.1| unknown [Lactuca sativa]
gi|255033458|gb|ACT99420.1| unknown [Lactuca sativa]
gi|255033460|gb|ACT99421.1| unknown [Lactuca sativa]
gi|255033462|gb|ACT99422.1| unknown [Lactuca sativa]
gi|255033464|gb|ACT99423.1| unknown [Lactuca sativa]
gi|255033480|gb|ACT99431.1| unknown [Lactuca sativa]
gi|255033486|gb|ACT99434.1| unknown [Lactuca sativa]
gi|255033488|gb|ACT99435.1| unknown [Lactuca sativa]
gi|255033496|gb|ACT99439.1| unknown [Lactuca sativa]
gi|255033534|gb|ACT99458.1| unknown [Lactuca sativa]
gi|255033538|gb|ACT99460.1| unknown [Lactuca sativa]
Length = 129
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 108/119 (90%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G I +RGAL+VLEGLDR GKTSQ +RLLSYL LG+ VE WRFPDR T+VG+MIS+YL+N
Sbjct: 11 GEIKARGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTN 70
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
QS LDDHTIHLLFSANRWEKRS+MEAKLK+G +LIVDRYSYSGVAFSSAKG++IEWCKA
Sbjct: 71 QSQLDDHTIHLLFSANRWEKRSLMEAKLKSGISLIVDRYSYSGVAFSSAKGLNIEWCKA 129
>gi|16975360|pdb|1E98|A Chain A, Wild Type Human Thymidylate Kinase Complexed With Aztmp
And Adp
Length = 215
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 127
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA + I
Sbjct: 128 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKRI 187
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V ++++ + D + + KP LW
Sbjct: 188 EAVHEEIRVLSEDAIRTATE-KPLGELW 214
>gi|321455804|gb|EFX66927.1| hypothetical protein DAPPUDRAFT_331571 [Daphnia pulex]
Length = 212
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GKT+QC + + +L+ L RFPDR+T +G +I+ YL + LD
Sbjct: 4 RGALIVLEGCDRSGKTTQCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTELD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH IHLLFSANRWE ++ L+ GT +IVDRYSYSG+AFS++K +D+ WC+ + GL
Sbjct: 64 DHAIHLLFSANRWELLPDIKKLLQKGTNVIVDRYSYSGIAFSASKPNMDLRWCQQSDSGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
L PD V++LDI P +A RG YG ERYE+LE Q+ V Y L+D SW+++DA +S+E+V
Sbjct: 124 LKPDLVIFLDINPVEAQTRGQYGSERYENLEMQKIVRSNYLKLQDESWRVVDASRSMEEV 183
Query: 233 EKQLKEIV---LDQVTACKKGKPFSLLW 257
+ + +V LD +T P S LW
Sbjct: 184 WRDVCRLVQEALDNIT------PDSALW 205
>gi|70984984|ref|XP_747998.1| thymidylate kinase [Aspergillus fumigatus Af293]
gi|66845626|gb|EAL85960.1| thymidylate kinase [Aspergillus fumigatus Af293]
gi|159126077|gb|EDP51193.1| thymidylate kinase [Aspergillus fumigatus A1163]
Length = 221
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 136/211 (64%), Gaps = 7/211 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V EGLDR GK+SQC RL L+ GHSV+ RFPDRTT +G++IS+YL QS
Sbjct: 6 NRGALIVFEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYLQGQSQA 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPE 169
DDH+IHLLFSANRWE +E + G ++IVDRYSYSG +S+AKG + +EW PE
Sbjct: 66 DDHSIHLLFSANRWEIAKSIEDDIANGISVIVDRYSYSGAVYSAAKGNPNLSLEWAWQPE 125
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDA 225
IGL PD L+L I PE+AA+RGG+G ERYE+ Q +V + +Q L D IDA
Sbjct: 126 IGLPQPDMCLFLRISPEEAAKRGGFGVERYENETMQNRVRELFQTLFDLQQGDYIHTIDA 185
Query: 226 CQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+S + V + + +IV D + P L
Sbjct: 186 GRSFDAVSQDIMKIVTDYIGRLDAMGPLKRL 216
>gi|240277647|gb|EER41155.1| thymidylate kinase [Ajellomyces capsulatus H143]
gi|325093734|gb|EGC47044.1| thymidylate kinase [Ajellomyces capsulatus H88]
Length = 232
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 139/211 (65%), Gaps = 10/211 (4%)
Query: 45 SLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISA 104
SLR N RGAL+VLEGLDR GK++QC+ L L+ GH V+ RFPDRTT +G++I+A
Sbjct: 3 SLRGSNKKQRGALIVLEGLDRAGKSTQCASLQKTLQEEGHEVKYRRFPDRTTEIGKLINA 62
Query: 105 YLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID 161
YL + LDDH+IHLLFSANRWE + ++ + G T+I+DRYSYSG +S+AK G+
Sbjct: 63 YLMQNAQLDDHSIHLLFSANRWEAAAEIQRDISNGITVIIDRYSYSGAVYSAAKNIPGLS 122
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS 219
+EW PEIGL PD L+L+I PE+AA+RGGYG ERYE+ FQ ++ Q +Q L R+
Sbjct: 123 LEWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGMERYENDAFQTRIRQLFQELVAREDP 182
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKKG 250
+ + D + E+ LD + A ++
Sbjct: 183 NNV-----HVVDASRAESEVALDVIRAARRA 208
>gi|426218485|ref|XP_004003477.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate kinase, partial [Ovis
aries]
Length = 209
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 145/209 (69%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 2 RGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE +M+ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 62 DHSVHLLFSANRWEHVPLMKEKLSQGITLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD V++L + +AA RG +G ERYE FQ++ Q + Q+L D S WK ++A +SI
Sbjct: 122 PKPDLVVFLQLQLAEAAARGEFGRERYESGPFQQRALQRFQQLLADPSLPWKTVNASRSI 181
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
EDV ++++ + D + A P LW+
Sbjct: 182 EDVHREIRALSEDAIRAAAH-XPLGQLWA 209
>gi|49456925|emb|CAG46783.1| DTYMK [Homo sapiens]
Length = 212
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH+ HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSAHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>gi|149643009|ref|NP_001092363.1| thymidylate kinase [Bos taurus]
gi|148743918|gb|AAI42259.1| DTYMK protein [Bos taurus]
Length = 212
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 146/209 (69%), Gaps = 5/209 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE +M+ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEHVPLMKEKLSQGVTLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD V++L + +AA RG +G ERY FQ++ Q + Q+L D S WK+++A +SI
Sbjct: 125 PKPDLVVFLQLQLAEAAARGEFGRERYGSGPFQQRALQRFQQLLADPSLPWKMVNASRSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
EDV ++++ + D + A +P LW+
Sbjct: 185 EDVHREIRALSEDAIRAAAH-RPLGQLWA 212
>gi|426339163|ref|XP_004033529.1| PREDICTED: thymidylate kinase isoform 1 [Gorilla gorilla gorilla]
Length = 212
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L G+ EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGYRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>gi|281209668|gb|EFA83836.1| thymidylate kinase [Polysphondylium pallidum PN500]
Length = 219
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEG-LGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG ++ EG DR GK++Q L +L LG + RFPDRTT G +I++YL N + L
Sbjct: 15 RGIFILFEGADRVGKSTQVQSLFGHLSTTLGLPTKQLRFPDRTTQTGTIINSYLQNSTQL 74
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD +HLLFSANRWE + + L G +L+VDRYSYSGVA+S+AKGID +WC E GL
Sbjct: 75 DDRALHLLFSANRWESKDTLLKHLNEGNSLVVDRYSYSGVAYSAAKGIDFDWCFGCEKGL 134
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ-MLRDSSWKIIDACQSIED 231
APD + YL + E A +RG YG ERYE ++FQ+K+ + Y+ L +SSW +I+A + IE+
Sbjct: 135 PAPDLIFYLKMDTEDATKRGDYGNERYEKVDFQKKIKEVYESKLVNSSWNVINANRPIEE 194
Query: 232 VEKQLKEIVLDQVTACKKGKPF 253
V K++ EIV + + KP
Sbjct: 195 VSKEINEIVDRSIKNGIQNKPI 216
>gi|328773773|gb|EGF83810.1| hypothetical protein BATDEDRAFT_8037 [Batrachochytrium
dendrobatidis JAM81]
Length = 181
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 121/169 (71%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V+EG DRCGKTSQCS L+S+L G +V +FPDRT G +I YL +
Sbjct: 11 SRGALIVVEGGDRCGKTSQCSVLVSHLCAAGFNVMAHKFPDRTLDTGVLIDQYLRGTKEV 70
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DDH IHLLFSANRWE +++ + G T++VDRY++SG A+++AKGID+EWCK P++GL
Sbjct: 71 DDHAIHLLFSANRWESMGHIKSLIDQGITIVVDRYAFSGAAYTAAKGIDLEWCKRPDMGL 130
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK 221
L PD VLYLD+ P+ AA R YG ERYE +EFQ V + + + D SWK
Sbjct: 131 LKPDLVLYLDLDPKIAAARAEYGSERYETIEFQAAVRRNFYQIADDSWK 179
>gi|326428009|gb|EGD73579.1| thymidylate kinase [Salpingoeca sp. ATCC 50818]
Length = 213
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 140/210 (66%), Gaps = 6/210 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+VLEG DRCGK++QC L+ L LGH +L RFP+R+T +G +I YL + LD
Sbjct: 4 RGVLIVLEGTDRCGKSTQCKLLVEKLASLGHEAKLMRFPERSTVIGGVIDKYLRKEIELD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH HLLFSANRWE S M+ LK+G +L++DRY++SGVAF+SAKG+D++WCK+P+ L
Sbjct: 64 DHAAHLLFSANRWELVSQMKQALKSGVSLVIDRYAFSGVAFTSAKGLDMDWCKSPDANLP 123
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS----SWKIIDACQSI 229
+PD ++L++ P +AA+R G+G ERYE EFQ KV Y+ L S +I A SI
Sbjct: 124 SPDLHIHLELDPTEAAKRVGFGSERYEVTEFQAKVKAKYEDLYASMTRPPRRIDVAGLSI 183
Query: 230 EDVEKQLKEIVLDQV--TACKKGKPFSLLW 257
EDV ++ E+ L+Q+ A K LW
Sbjct: 184 EDVHAKVLELALEQLQDAALSKVDDMVTLW 213
>gi|62898429|dbj|BAD97154.1| deoxythymidylate kinase (thymidylate kinase) variant [Homo sapiens]
Length = 212
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+ R GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVGRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>gi|348577653|ref|XP_003474598.1| PREDICTED: thymidylate kinase-like isoform 1 [Cavia porcellus]
Length = 212
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 145/208 (69%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+S L GH EL RFPDR+T +G+++S+YL +S L+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVSALCAAGHRAELLRFPDRSTEIGKLLSSYLEKKSELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLYQGVTLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQ-RKVAQCYQMLRDSS--WKIIDACQSI 229
PD +L+L + AA RG +G ERYE FQ R + Q++RDS+ WK++DA + I
Sbjct: 125 PKPDLILFLQLQLTDAATRGEFGHERYEEKTFQERALCGFQQLMRDSTLNWKVVDASRRI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V +++ + + + + KP LW
Sbjct: 185 EEVHEEICTLSKAAILSAAQ-KPLGKLW 211
>gi|219121041|ref|XP_002185752.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582601|gb|ACI65222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 139/220 (63%), Gaps = 16/220 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGA VVLEG+DRCGKT+Q LL L G + RFPDRTT+ G++I YL + +L
Sbjct: 9 SRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQNL 68
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID--------IEW 164
DD IHLLFSANRWE + A L+AGTT++ DRY+YSGVAFS++K ID ++W
Sbjct: 69 DDRAIHLLFSANRWESADALTAHLQAGTTVLCDRYAYSGVAFSASK-IDKKGNSLLSLDW 127
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD------- 217
C+AP+ GL APD V++LD+ +A +RGGYGGERYE E Q +V + L
Sbjct: 128 CQAPDQGLPAPDCVIFLDLSQAEAEQRGGYGGERYEKKEMQIRVRHRFGDLEAIDKASGR 187
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+WK IDA QS+E VE + + V + + A K K +W
Sbjct: 188 VAWKFIDAAQSVEQVENDIWKAVEETIQAVKGSKALGKMW 227
>gi|261202488|ref|XP_002628458.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
gi|239590555|gb|EEQ73136.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
gi|239612282|gb|EEQ89269.1| thymidylate kinase [Ajellomyces dermatitidis ER-3]
Length = 232
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 138/207 (66%), Gaps = 14/207 (6%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N RGAL+V+EGLDR GK++QC+ L L+ GH V+ RFPDRTT +G+MI+AYL
Sbjct: 8 NEGQRGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYLMGN 67
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCK 166
+HLDDH IHLLFSANRWE + ++ + G T+I+DRYSYSGV +S+AK G+ ++W
Sbjct: 68 THLDDHAIHLLFSANRWEAATEIQQDISNGITVIIDRYSYSGVVYSAAKDIPGLSLDWAW 127
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKI 222
PEIGL PD L+L+I PE+AA+RGGYG ERYE+ FQ ++ Q +Q L + I
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKRGGYGLERYENDTFQSRIRQLFQTLIAREDPDNVHI 187
Query: 223 IDACQSIEDVEKQLKEIVLDQVTACKK 249
IDA ++ +E+ LD + +K
Sbjct: 188 IDAGRT-------EREVALDVIETARK 207
>gi|225557103|gb|EEH05390.1| thymidylate kinase [Ajellomyces capsulatus G186AR]
Length = 232
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 139/211 (65%), Gaps = 10/211 (4%)
Query: 45 SLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISA 104
+LR N RGAL+VLEGLDR GK++QC+ L L+ GH V+ RFPDRTT +G++I+A
Sbjct: 3 ALRGSNKKQRGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINA 62
Query: 105 YLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID 161
YL + LDDH+IHLLFSANRWE + ++ + G T+I+DRYSYSG +S+AK G+
Sbjct: 63 YLMQNAQLDDHSIHLLFSANRWEAAAEIQRDISNGITVIIDRYSYSGAVYSAAKNIPGLS 122
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS 219
+EW PEIGL PD L+L+I PE+AA+RGGYG ERYE+ FQ ++ Q +Q L R+
Sbjct: 123 LEWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGMERYENDAFQTRIRQLFQELVAREDP 182
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKKG 250
+ + D + E+ LD + A ++
Sbjct: 183 NNV-----HVVDAGRAESEVALDVIRAARRA 208
>gi|298709115|emb|CBJ31061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 228
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 138/212 (65%), Gaps = 8/212 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA ++ EG+DRCGKT+Q + L+ L+ GH RFPDRTT +G MI+ +L N + +D
Sbjct: 14 RGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLRNTTDID 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
D +HLLFSANRWE S + LKAGTT++ DRY+YSGVAFS++K G+ + WCK P+ GL
Sbjct: 74 DRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPGLSVRWCKDPDRGL 133
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS------SWKIIDAC 226
APD +L+LDI E A +RG +G ERYE EFQR V + L + +W++IDA
Sbjct: 134 PAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAN 193
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
+ I ++ ++++I V +GK LWS
Sbjct: 194 REIGSIQDEIQKIGT-SVVGEVEGKEIGSLWS 224
>gi|66804303|ref|XP_635930.1| thymidylate kinase [Dictyostelium discoideum AX4]
gi|74851984|sp|Q54GN2.1|KTHY_DICDI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|60464271|gb|EAL62422.1| thymidylate kinase [Dictyostelium discoideum AX4]
Length = 222
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 129/188 (68%), Gaps = 2/188 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGH-SVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG ++ EG+DR GK++Q L +++ + + RFPDRTT +GQ+I+ YL N +++
Sbjct: 18 RGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYLQNATNM 77
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD +HLLFS+NRWE R + L GT ++VDRYSYSGVA+S+AKGID +WC A E GL
Sbjct: 78 DDRALHLLFSSNRWEARDSILELLNNGTNIVVDRYSYSGVAYSAAKGIDFDWCYACEKGL 137
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
PD + YL + E A +RG YGGERYE LEFQ+K+ Q Y + L D WKII+A +SI++
Sbjct: 138 PKPDLIFYLSMSSEDATKRGEYGGERYEKLEFQKKIKQIYEEKLVDDQWKIINANRSIDE 197
Query: 232 VEKQLKEI 239
+ ++ I
Sbjct: 198 ISNEISSI 205
>gi|330797527|ref|XP_003286811.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum]
gi|325083184|gb|EGC36643.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum]
Length = 219
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 141/209 (67%), Gaps = 3/209 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGH-SVELWRFPDRTTSVGQMISAYLSN 108
NI RG ++ EG DR GK++Q L +++ + + RFPDRTT +GQ+++ YL N
Sbjct: 11 NIMKRGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYLQN 70
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
+++DD +HLLFS+NRWE + + L +GT ++VDRYSYSGVA+++AKGID++WC +
Sbjct: 71 ATNMDDRALHLLFSSNRWEAKDSILELLNSGTNIVVDRYSYSGVAYTAAKGIDVDWCYSC 130
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
E GL PD V YL + E A +RG YGGERYE +EFQ K+ Q Y + L+ SWK+I+A +
Sbjct: 131 EKGLPEPDIVFYLSMSTEDATKRGDYGGERYEKVEFQMKIKQIYEEKLKRPSWKVINANR 190
Query: 228 SIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
++E+V ++ +I ++ + +K KP L
Sbjct: 191 TVEEVSNEINQIFDSELESLQK-KPIGTL 218
>gi|195150817|ref|XP_002016347.1| GL10538 [Drosophila persimilis]
gi|194110194|gb|EDW32237.1| GL10538 [Drosophila persimilis]
Length = 211
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 136/210 (64%), Gaps = 4/210 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
++ RGAL V EG DRCGKT+Q L +L+ G FP+R +S GQ+I++YL+N
Sbjct: 2 SVGKRGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNS 61
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
+ L D IHL+FSANRWE + + +L AGTTLIVDRYSYSGVA+++AKG+D +WC APE
Sbjct: 62 NDLPDEVIHLMFSANRWEYMNKIRKELLAGTTLIVDRYSYSGVAYTAAKGLDFDWCYAPE 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDAC 226
GL+ PD+V YL + RG YG ERYE LEFQ+KVA+ + + S W IDA
Sbjct: 122 RGLIKPDAVFYLKTASDNLLSRGKYGEERYEKLEFQQKVAEVFNRICEQESSYWHQIDAN 181
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
QS+ ++ Q+ I +++ G+P + L
Sbjct: 182 QSVAEIHTQISGIA-EKLQQQVDGQPLNKL 210
>gi|321452944|gb|EFX64236.1| hypothetical protein DAPPUDRAFT_231894 [Daphnia pulex]
Length = 209
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 135/205 (65%), Gaps = 1/205 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GKT+ C + + +L+ L RFPDR+T +G +I+ YL + LD
Sbjct: 4 RGALIVLEGCDRSGKTTLCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTELD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
D+ IHLLFSANRWE ++ L+ GT +IVDRYSYSG+AFS+AK +D+ WC+ + GL
Sbjct: 64 DYAIHLLFSANRWELLPDIKKLLQKGTNVIVDRYSYSGIAFSAAKPNMDLRWCQQSDSGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
L PD V++LDI P +A RG YG ERYE+LE Q+ V Y L+D SWK++DA +S+E+V
Sbjct: 124 LKPDLVIFLDIDPVEAQTRGQYGSERYENLEMQKVVRSNYLKLQDESWKVVDASRSMEEV 183
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLW 257
+ + +V + + LW
Sbjct: 184 GRDVCRLVQEALDNITPDSALKQLW 208
>gi|449548017|gb|EMD38984.1| hypothetical protein CERSUDRAFT_112696 [Ceriporiopsis subvermispora
B]
Length = 227
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 131/192 (68%), Gaps = 5/192 (2%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
+ RGA +V+EGLDR GK++Q ++LL L G +L FPDRTT++G+MI +YL ++
Sbjct: 3 EVQKRGAFIVVEGLDRSGKSTQSTQLLEKLRSAGIDAKLLNFPDRTTTIGKMIDSYLRSE 62
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
S LDD IHLLFSANRWE S +E+ L+AGT ++ DRY++SG+AFS+AKG+ WC+AP+
Sbjct: 63 SELDDRAIHLLFSANRWEAASSIESSLRAGTLILCDRYAFSGLAFSAAKGLPYTWCRAPD 122
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-----SSWKIID 224
+GL APD L LD+ PE+ A+RGG+G ERYE E Q +V ++ + D W ++D
Sbjct: 123 VGLPAPDLTLLLDVSPEQQAKRGGFGAERYEKAEMQERVRAVFERVGDEMGAGGRWVVVD 182
Query: 225 ACQSIEDVEKQL 236
A + V +L
Sbjct: 183 ADAEQDAVAYEL 194
>gi|154285394|ref|XP_001543492.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
gi|150407133|gb|EDN02674.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
Length = 232
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 10/211 (4%)
Query: 45 SLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISA 104
+LR N RGAL+VLEGLDR GK++QC+ L L+ GH V+ RFPDRTT +G++I+
Sbjct: 3 ALRGSNKKQRGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLING 62
Query: 105 YLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID 161
YL + LDDH+IHLLFSANRWE + ++ + G T+I+DRYSYSG +S+AK G+
Sbjct: 63 YLMQNAQLDDHSIHLLFSANRWEAAAEIQRDISNGITVIIDRYSYSGAVYSAAKNIPGLS 122
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS 219
+EW PEIGL PD L+L+I PE+AA+RGGYG ERYE+ FQ ++ Q +Q L R+
Sbjct: 123 LEWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGMERYENDAFQTRIRQLFQELIAREDP 182
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKKG 250
I + D + E+ LD + A ++
Sbjct: 183 NNI-----HVVDAGRAESEVALDVIRAARRA 208
>gi|169776481|ref|XP_001822707.1| thymidylate kinase [Aspergillus oryzae RIB40]
gi|83771442|dbj|BAE61574.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 225
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 7/192 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK+SQC L YL+ GHSV+ RFPDRTT++G++I +YL QS L
Sbjct: 10 TRGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLRGQSQL 69
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
DDH+IHLLFSANRWE ++E + G T+IVDRYSYSG +S+AKGI + W PE
Sbjct: 70 DDHSIHLLFSANRWEIAKVIEEDIAKGITVIVDRYSYSGAVYSAAKGIPTLSLGWAWQPE 129
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDA 225
+GL PD L+L I P +AA+RGG+G ERYE+ Q +V + +Q L D +++A
Sbjct: 130 VGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVRELFQTLFDLQPNGDIHVVNA 189
Query: 226 CQSIEDVEKQLK 237
+S ++V ++++
Sbjct: 190 GRSFQEVSEEIR 201
>gi|296817147|ref|XP_002848910.1| thymidylate kinase [Arthroderma otae CBS 113480]
gi|238839363|gb|EEQ29025.1| thymidylate kinase [Arthroderma otae CBS 113480]
Length = 233
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVV+EGLDR GK++QC+ L +L GH V+ RFPDRTTS+GQMI YL + LD
Sbjct: 10 RGALVVVEGLDRAGKSTQCATLYQFLINQGHKVKYIRFPDRTTSIGQMIDKYLRGEIQLD 69
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA---KGIDIEWCKAPEI 170
DH +HLLFSANRWE + + ++ G T+IVDRYSYSG +S+A K + ++W PEI
Sbjct: 70 DHAVHLLFSANRWEAAAQIRQDIEGGITVIVDRYSYSGAVYSAAKENKELQLDWAWRPEI 129
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR----DSSWKIIDAC 226
GL PD +L+I E AA+RGGYG ERYE + Q+KV + + L + +++DA
Sbjct: 130 GLPRPDIWFFLNISTESAAKRGGYGTERYETVNLQKKVGKLFISLSGLKGNEDMRVVDAG 189
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+ IE++ ++L+ VL + P L
Sbjct: 190 REIEEISRELQSEVLQTIANIDSMGPLRKL 219
>gi|223996301|ref|XP_002287824.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976940|gb|EED95267.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 276
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 21/225 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
RGA ++LEG+DRCGKT+Q S L+ +L L + +RFPDR+T VG +I++YL++ +
Sbjct: 35 RGAFILLEGVDRCGKTTQVSLLVKHLLSLSLATVAYRFPDRSTQVGSLINSYLTSSTPTA 94
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----------G 159
LDD IHLLFSANRWE + + L +GT ++ DRY+YSGVAF+SAK
Sbjct: 95 PLDDRAIHLLFSANRWEASTSLARTLASGTNIVCDRYAYSGVAFTSAKVEEDRGSMSGGE 154
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-- 217
+ +EWC AP++GL APD V++LD+ ++A +RGGYGGERYE + Q +V + + L+
Sbjct: 155 LGLEWCIAPDVGLPAPDCVIFLDLEQDEAEKRGGYGGERYEKRDLQMRVRKRFAELQSLD 214
Query: 218 -----SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
W ++DA QSIE+V +L IV D + G P +W
Sbjct: 215 EQNGRVPWHVVDASQSIEEVTGELVSIVNDTIERVNNGSPLRRMW 259
>gi|238503185|ref|XP_002382826.1| thymidylate kinase [Aspergillus flavus NRRL3357]
gi|220691636|gb|EED47984.1| thymidylate kinase [Aspergillus flavus NRRL3357]
Length = 225
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 7/192 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK+SQC L YL+ GHSV+ RFPDRTT++G++I +YL QS L
Sbjct: 10 TRGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLRGQSQL 69
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
DDH+IHLLFSANRWE ++E + G T+IVDRYSYSG +S+AKGI + W PE
Sbjct: 70 DDHSIHLLFSANRWEIAKVIEEDIAKGITVIVDRYSYSGAVYSAAKGIPTLSLGWAWQPE 129
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDA 225
+GL PD L+L I P +AA+RGG+G ERYE+ Q +V + +Q L D +++A
Sbjct: 130 VGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVRELFQTLFDLQPNGDIHVVNA 189
Query: 226 CQSIEDVEKQLK 237
+S ++V ++++
Sbjct: 190 GRSFKEVSEEIR 201
>gi|391870631|gb|EIT79808.1| thymidylate kinase/adenylate kinase [Aspergillus oryzae 3.042]
Length = 225
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 7/192 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK+SQC L YL+ GHSV+ RFPDRTT++G++I +YL QS L
Sbjct: 10 TRGALIVVEGLDRAGKSSQCESLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLRGQSQL 69
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
DDH+IHLLFSANRWE ++E + G T+IVDRYSYSG +S+AKGI + W PE
Sbjct: 70 DDHSIHLLFSANRWEIAKVIEEDIAKGITVIVDRYSYSGAVYSAAKGIPTLSLGWAWQPE 129
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDA 225
+GL PD L+L I P +AA+RGG+G ERYE+ Q +V + +Q L D +++A
Sbjct: 130 VGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVRELFQTLFDLQPNGDIHVVNA 189
Query: 226 CQSIEDVEKQLK 237
+S ++V ++++
Sbjct: 190 GRSFQEVSEEIR 201
>gi|195436525|ref|XP_002066218.1| GK22056 [Drosophila willistoni]
gi|194162303|gb|EDW77204.1| GK22056 [Drosophila willistoni]
Length = 209
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 7/198 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTS-VGQMISAYLSNQSHL 112
RGA +V EG DR GKT+Q L+ L+ G S FP+R +S +GQ+I++YL+N L
Sbjct: 3 RGAFIVFEGCDRSGKTTQSRLLVEKLQANGVSTVHLNFPERKSSQIGQVINSYLTNSQDL 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IHL+FSANRWE + M +L+AGTTL+VDRYSYSGVA++ AKG+D+ WC APE GL
Sbjct: 63 PDEVIHLMFSANRWEHLNRMRKQLEAGTTLVVDRYSYSGVAYTVAKGLDLNWCYAPERGL 122
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS-WKIIDACQSI 229
L PD+V YL ++ A+RG YG ERYE LEFQRKV+ + L R+SS W ++A +
Sbjct: 123 LKPDAVFYLKTELDELAKRGSYGTERYEKLEFQRKVSSVFDCLYERESSYWHRLNASDKV 182
Query: 230 EDVEKQLKEI---VLDQV 244
ED+ +Q+ +I +L+QV
Sbjct: 183 EDLHQQIAQISEKLLEQV 200
>gi|388582945|gb|EIM23248.1| putative thymidylate kinase, partial [Wallemia sebi CBS 633.66]
Length = 200
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRG +V+EGLDR GK++QC++LL+Y G L +FPDRTT++GQMI++YL +++ L
Sbjct: 2 SRGLFIVVEGLDRTGKSTQCAQLLNYFSNAGRQATLMKFPDRTTNIGQMINSYLQSKTEL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+D IHLLFSANRWE + + +GTT+I DRY+YSGVA+S AKG+D ++CK+P+ GL
Sbjct: 62 NDKAIHLLFSANRWELSQYIIDTINSGTTIIADRYAYSGVAYSIAKGLDYDYCKSPDKGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSW--KIIDACQSI 229
PD V +LD+PP+ A +R YG ERYE L+ Q +V + +++ ++ + KI S+
Sbjct: 122 PIPDKVFFLDLPPQLAQQREDYGEERYESLDIQTRVRSSFMKIIAENQYINKIDVTGLSV 181
Query: 230 EDVEKQL-KEIVLDQVTA 246
EDV ++L K+I D + A
Sbjct: 182 EDVHRELVKQIPSDTLDA 199
>gi|125808374|ref|XP_001360729.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
gi|54635901|gb|EAL25304.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
Length = 211
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
++ RGAL V EG DRCGKT+Q L +L+ G FP+R +S GQ+I++YL+N
Sbjct: 2 SVGKRGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNS 61
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
+ L D IHL+FSANRWE + + +L AGTTLIVDRYSYSGVA+++AKG+D +WC APE
Sbjct: 62 NDLPDEVIHLMFSANRWEYMNKIRKELLAGTTLIVDRYSYSGVAYTAAKGLDFDWCYAPE 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDAC 226
GL+ PD+V YL + RG YG ERYE LEFQ+KVA+ + + S W IDA
Sbjct: 122 RGLIKPDAVFYLKTASDNLLSRGKYGEERYEKLEFQQKVAEVFNRICEQESSYWHQIDAN 181
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
Q + ++ Q+ I +++ G+P + L
Sbjct: 182 QPVAEIHTQISGIA-EKLQQQVDGQPLNKL 210
>gi|425772476|gb|EKV10877.1| hypothetical protein PDIG_53650 [Penicillium digitatum PHI26]
gi|425774908|gb|EKV13199.1| hypothetical protein PDIP_48870 [Penicillium digitatum Pd1]
Length = 230
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 139/214 (64%), Gaps = 11/214 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EGLDR GK+SQC L L G V+ RFPDRTT +GQ+I +YL SH D
Sbjct: 11 RGALIVVEGLDRAGKSSQCEMLRDSLSRQGRVVKYIRFPDRTTPIGQLIDSYLRGTSHQD 70
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH+IHLLFSANRWE +E + G T+IVDRYSYSGV +S+AK + +EW PEI
Sbjct: 71 DHSIHLLFSANRWEIAKSIEEDITNGKTVIVDRYSYSGVVYSAAKANPTLSLEWAWQPEI 130
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQS 228
GL PD L+L I PE+AA+RGG+G ERYE+ Q +V + ++++ + IIDA ++
Sbjct: 131 GLPRPDICLFLSISPEEAAKRGGFGAERYENEAMQTRVRELFRVIFEKQHDVSIIDAGKA 190
Query: 229 IEDVEKQLKEIV------LDQVTACKKGKPFSLL 256
I++V ++++ V LD A K +PF L
Sbjct: 191 IDEVSREIQGAVAGCIARLDATGALGKLEPFGEL 224
>gi|157785665|ref|NP_001099137.1| thymidylate kinase isoform 1 [Mus musculus]
gi|193806346|sp|P97930.2|KTHY_MOUSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|20987342|gb|AAH30178.1| Dtymk protein [Mus musculus]
gi|148707983|gb|EDL39930.1| deoxythymidylate kinase, isoform CRA_a [Mus musculus]
Length = 212
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++++YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++AKL G TL++DRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD +L+L + AA RG +G ERYE FQ++V C+Q L ++ +WK++DA +SI
Sbjct: 125 PKPDLILFLQLQLLDAAARGEFGLERYETGTFQKQVLLCFQQLMEEKNLNWKVVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V K+++ D + + +P LW
Sbjct: 185 EEVHKEIRAHSEDAIRNAAQ-RPLGELW 211
>gi|195027421|ref|XP_001986581.1| GH20447 [Drosophila grimshawi]
gi|193902581|gb|EDW01448.1| GH20447 [Drosophila grimshawi]
Length = 211
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
++ RGA +V EG DR GKT+Q L S L G ++ FPDRTT++G MI+AYL+N
Sbjct: 2 HVGKRGAFIVFEGCDRSGKTTQSRHLSSVLTSKGVDIKQINFPDRTTTIGGMINAYLTNT 61
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L D IHLLFSANRWE ++ L AGTT+I DRYSYSG A+S+AKG+D +WC AP+
Sbjct: 62 QDLKDEVIHLLFSANRWECVDSIKKDLLAGTTVICDRYSYSGAAYSAAKGVDFDWCCAPD 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDAC 226
GLL PD+V YL ++ RG YG ERYE L+FQRKV + + L R S W ++DA
Sbjct: 122 RGLLEPDAVFYLKANLDELTSRGSYGEERYEKLDFQRKVGEQFDRLYAQRSSYWHLLDAS 181
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+S+++++ Q+ + D V +P S +
Sbjct: 182 KSLQELQDQIAAVA-DGVLQQAAEQPLSTI 210
>gi|134109297|ref|XP_776763.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259443|gb|EAL22116.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 217
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 129/192 (67%), Gaps = 8/192 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V EGLDRCGK++Q RL+ LE GH L +FPDRTT +G+MI AYL +++ +
Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPDRTTQIGKMIDAYLQSKTEI 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DDH IHLLFSANRWE + + L G T+I DRY++SG+AFS+AKG+ ++C P+ GL
Sbjct: 65 DDHAIHLLFSANRWECSAAIRRDLANGITVIADRYAFSGIAFSAAKGLPFDFCLHPDAGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD--------SSWKIID 224
PD LYL +PPE AA+R YG ERYE + Q+ V Q ++++ + W I+
Sbjct: 125 PLPDVTLYLTLPPETAAKRSAYGEERYESVSIQQAVRQQFKLVANEIKNRHGSDKWIEIE 184
Query: 225 ACQSIEDVEKQL 236
A + EDVE+++
Sbjct: 185 ADGTFEDVEERI 196
>gi|443924579|gb|ELU43577.1| thymidylate kinase [Rhizoctonia solani AG-1 IA]
Length = 414
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 139/187 (74%), Gaps = 7/187 (3%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L L GLDR GK++QC+R++S +EG G V+ +FPDRTT +G++I AYL +++ +DDHT
Sbjct: 201 LRSLTGLDRSGKSTQCARMVSRIEGEGKPVKAIKFPDRTTEIGKLIDAYLQSKAEVDDHT 260
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEIGL 172
IHLLFSANRWE RS +++ L++GTT++ DRY+YSG+AFS+AK + EWC +P++GL
Sbjct: 261 IHLLFSANRWELHRSSIKSLLESGTTIVCDRYAYSGLAFSAAKQKPDLSYEWCLSPDVGL 320
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RD--SSWKIIDACQSI 229
APD+ +L++ PE A +RGGYG ERYE+ E QR V Q +Q + +D W+++DA ++
Sbjct: 321 PAPDAAFFLEVAPEVAKQRGGYGQERYENEEMQRAVRQTFQRIGKDVQERWQVVDANRTQ 380
Query: 230 EDVEKQL 236
+VE+ L
Sbjct: 381 GEVEEDL 387
>gi|406702600|gb|EKD05587.1| hypothetical protein A1Q2_00077 [Trichosporon asahii var. asahii
CBS 8904]
Length = 214
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 123/164 (75%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EGLDR GKT+Q RL++ L+ G L +FPDRTT +G+MI AYL +++ +D
Sbjct: 4 RGALIVFEGLDRSGKTTQVDRLIARLQKEGRKARLQKFPDRTTGIGKMIDAYLQSKAEMD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH IHLLFSANRWE S + A L AG +++VDRY++SG+AFS+AKG+D +C+AP++GL
Sbjct: 64 DHAIHLLFSANRWECVSSILASLDAGESVVVDRYAFSGLAFSAAKGLDFGYCQAPDVGLP 123
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
PD LYL + PE AA+RG YG ERYE++E Q++V + + + D
Sbjct: 124 LPDLTLYLTLSPEVAAQRGAYGQERYENVELQKEVRRQFAAVFD 167
>gi|336366715|gb|EGN95061.1| hypothetical protein SERLA73DRAFT_187350 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379395|gb|EGO20550.1| hypothetical protein SERLADRAFT_399491 [Serpula lacrymans var.
lacrymans S7.9]
Length = 225
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 139/213 (65%), Gaps = 14/213 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
R +V+EGLDR GK++Q S L +L LG VEL++FPDR T++G+MI +YL ++S LD
Sbjct: 4 RAPFIVVEGLDRSGKSTQASILCDHLTSLGLPVELFKFPDRRTAIGKMIDSYLRSESDLD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE S + + L+ GTT+I DRY++SG+AFS+ KG+ +WC+AP++GL
Sbjct: 64 DRAIHLLFSANRWELASTISSHLEKGTTIIADRYAFSGIAFSARKGLSYKWCQAPDVGLP 123
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD------SSWKIIDACQ 227
APD ++LDI P+ A RGGYG ERYE E QR V Q ++ + + W IDA +
Sbjct: 124 APDLTMFLDIEPDIAQARGGYGTERYEQEEVQRDVRQVFERIEKEMTHAGARWVKIDAGR 183
Query: 228 SIEDVEKQL---KEIVLDQVTACKKGKPFSLLW 257
+ ++V + + + +LD V P LW
Sbjct: 184 TQKEVSQDVWVHVQSILDSVH-----HPVGTLW 211
>gi|37206|emb|CAA38528.1| thymidylate kinase [Homo sapiens]
Length = 211
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 146/208 (70%), Gaps = 6/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L G EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEAL-SRGPPPELLRFPERSTEIGKLLSSYLQKKSDVE 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 64 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA + +
Sbjct: 124 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKRL 183
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V ++L+ + D + + KP LW
Sbjct: 184 EAVHEELRVLSEDAIRTATE-KPLGELW 210
>gi|323446155|gb|EGB02432.1| hypothetical protein AURANDRAFT_35261 [Aureococcus anophagefferens]
gi|323448063|gb|EGB03967.1| hypothetical protein AURANDRAFT_33306 [Aureococcus anophagefferens]
Length = 214
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 127/181 (70%), Gaps = 2/181 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VV EG+DR GK++QC L+ L G S EL RFP+R+T +GQ+I YL + LD
Sbjct: 9 RGVFVVFEGVDRSGKSTQCKLLVEGLRAKGRSAELRRFPERSTGIGQLIDKYLKRELELD 68
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG--IDIEWCKAPEIG 171
D +HLLFSANRW++ + +E L +G ++ DRY++SGVAFS+AK D++WCKAP+ G
Sbjct: 69 DRAVHLLFSANRWDEAAKIERALASGVDVVCDRYAFSGVAFSAAKPNIDDLDWCKAPDAG 128
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIED 231
L PD V++L+IP KA RGG+G ERYE Q++VAQ + LR SW+++DA +++++
Sbjct: 129 LPKPDVVVFLEIPAAKAEARGGFGDERYEESAMQKRVAQHFVDLRGPSWRVLDAARTVDE 188
Query: 232 V 232
V
Sbjct: 189 V 189
>gi|327353237|gb|EGE82094.1| thymidylate kinase [Ajellomyces dermatitidis ATCC 18188]
Length = 225
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 135/202 (66%), Gaps = 14/202 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
GAL+V+EGLDR GK++QC+ L L+ GH V+ RFPDRTT +G+MI+AYL +HLDD
Sbjct: 6 GALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYLMGNTHLDD 65
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPEIG 171
H IHLLFSANRWE + ++ + G T+I+DRYSYSGV +S+AK I ++W PEIG
Sbjct: 66 HAIHLLFSANRWEAATEIQQDISNGITVIIDRYSYSGVVYSAAKDIPELSLDWAWQPEIG 125
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQ 227
L PD L+L+I PE+AA+RGGYG ERYE+ FQ ++ Q +Q L + IIDA +
Sbjct: 126 LPQPDIWLFLNISPEEAAKRGGYGLERYENDTFQSRIRQLFQTLIAREDPDNVHIIDAGR 185
Query: 228 SIEDVEKQLKEIVLDQVTACKK 249
+ +E+ LD + +K
Sbjct: 186 T-------EREVALDVIETARK 200
>gi|213409950|ref|XP_002175745.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
gi|212003792|gb|EEB09452.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
Length = 209
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 124/195 (63%), Gaps = 9/195 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VV EGLDR GK++Q L L G L RFPDR T++G+ I AYL N++ L
Sbjct: 2 RGKFVVFEGLDRSGKSTQAELLKKALIDRGQRAILLRFPDRGTTIGKQIDAYLKNKNKLP 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE S +EA L G IVDRYS+SGVAFS+AKG+D +WCK PE GL
Sbjct: 62 DEAIHLLFSANRWELASTIEAALADGVHCIVDRYSFSGVAFSAAKGMDWDWCKQPERGLP 121
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR---------DSSWKIID 224
+PD VL+ + P A++R G+G ERYE FQR VA+ Y +LR D SW +ID
Sbjct: 122 SPDIVLFFQVDPNIASKRAGFGNERYELPVFQRTVAEKYALLRQEFVKERKNDDSWLMID 181
Query: 225 ACQSIEDVEKQLKEI 239
QSIE V ++ I
Sbjct: 182 GNQSIEQVHLKILTI 196
>gi|28573735|ref|NP_611290.3| CG5757, isoform A [Drosophila melanogaster]
gi|442624090|ref|NP_001261065.1| CG5757, isoform B [Drosophila melanogaster]
gi|28380736|gb|AAF57756.2| CG5757, isoform A [Drosophila melanogaster]
gi|220949114|gb|ACL87100.1| CG5757-PA [synthetic construct]
gi|220958186|gb|ACL91636.1| CG5757-PA [synthetic construct]
gi|223967371|emb|CAR93416.1| CG5757-PA [Drosophila melanogaster]
gi|223967373|emb|CAR93417.1| CG5757-PA [Drosophila melanogaster]
gi|223967377|emb|CAR93419.1| CG5757-PA [Drosophila melanogaster]
gi|223967379|emb|CAR93420.1| CG5757-PA [Drosophila melanogaster]
gi|223967385|emb|CAR93423.1| CG5757-PA [Drosophila melanogaster]
gi|223967387|emb|CAR93424.1| CG5757-PA [Drosophila melanogaster]
gi|223967391|emb|CAR93426.1| CG5757-PA [Drosophila melanogaster]
gi|440214494|gb|AGB93597.1| CG5757, isoform B [Drosophila melanogaster]
Length = 211
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFNRICSKEGSYFHQFDARQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIASIT 195
>gi|196015603|ref|XP_002117658.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
gi|190579827|gb|EDV19916.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
Length = 211
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 134/196 (68%), Gaps = 4/196 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+++EG DR GK++Q L+ L G EL +FPDRTT +G++ +YL L
Sbjct: 6 NRGALIIIEGGDRTGKSTQSKMLVDALLADGKQAELVKFPDRTTPIGKLAGSYLQKTLDL 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIG 171
+DH IHL+FSANRWEK + +L+ G TL+VDRY++SGVA++SAK G DIEWCK + G
Sbjct: 66 EDHAIHLIFSANRWEKVPSIIERLENGITLVVDRYAFSGVAYTSAKRGFDIEWCKQSDTG 125
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIED 231
+ APD V+YL +P ++A R YG ERYE +FQ++ + ++ L +W +DA QSI+
Sbjct: 126 IPAPDLVIYLTLPVDQATSRDQYGTERYESTQFQKRAVENFEKLMTKNWTTLDASQSIDA 185
Query: 232 VEKQLKEI---VLDQV 244
+ +Q+K++ ++ QV
Sbjct: 186 IHQQMKDLTTEIMQQV 201
>gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster]
Length = 225
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 20 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 79
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 80 DEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 139
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 140 KPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFNRICSKEGSYFHQFDARQSVE 199
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 200 DLHAQIASIT 209
>gi|58265708|ref|XP_570010.1| thymidylate kinase [Cryptococcus neoformans var. neoformans JEC21]
gi|57226242|gb|AAW42703.1| thymidylate kinase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 217
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 132/200 (66%), Gaps = 8/200 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V EGLDRCGK++Q RL+ LE GH L +FP+RTT +G+MI AYL +++ +
Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPERTTQIGKMIDAYLQSKTEI 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DDH IHLLFSANRWE + + L G T+I DRY++SG+AFS+AKG+ ++C P+ GL
Sbjct: 65 DDHAIHLLFSANRWECSAAIRRDLANGITVIADRYAFSGIAFSAAKGLPFDFCLHPDAGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD--------SSWKIID 224
PD LYL +PPE AA+R YG ERYE + Q+ V Q ++++ + W I+
Sbjct: 125 PLPDVTLYLTLPPETAAKRSAYGEERYESVSIQQAVRQQFKLVANEIKKRHGADKWIEIE 184
Query: 225 ACQSIEDVEKQLKEIVLDQV 244
A + EDVE+++ + D V
Sbjct: 185 ADGTFEDVEERIWSQISDVV 204
>gi|118351574|ref|XP_001009062.1| thymidylate kinase family protein [Tetrahymena thermophila]
gi|89290829|gb|EAR88817.1| thymidylate kinase family protein [Tetrahymena thermophila SB210]
Length = 211
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 135/210 (64%), Gaps = 9/210 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V EGLDRCGKTSQC L+++L+ G + R+PDRTT++GQ I+ YL + +L
Sbjct: 4 RGLFIVFEGLDRCGKTSQCENLVNFLKESGKKAIMKRYPDRTTTIGQTINNYLQGKQNLS 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE++ ++ L GT ++ DRY YSG ++SAKG DIEWCK P+ GL+
Sbjct: 64 DQAIHLIFSANRWEQQEEIKKILDEGTNIVCDRYCYSGAVYTSAKGYDIEWCKNPDKGLI 123
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQSIED 231
PD VLYL P E ++R G+GGE YE EFQ+KV + + L ++ + IDA + E+
Sbjct: 124 KPDIVLYLHAPKEVISKRSGFGGEVYEKEEFQQKVREAFDNLLQKEDNVVFIDASGTKEE 183
Query: 232 V----EKQLKEIVLDQVTACKKGKPFSLLW 257
V + +K++ D A K + S LW
Sbjct: 184 VFDLINQNIKKVFED---ASTKDQKISHLW 210
>gi|116805958|emb|CAL26358.1| CG5757 [Drosophila melanogaster]
Length = 211
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFDRICSKEGSYFHQFDARQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIASIT 195
>gi|116805956|emb|CAL26357.1| CG5757 [Drosophila melanogaster]
gi|116805970|emb|CAL26364.1| CG5757 [Drosophila melanogaster]
gi|223967375|emb|CAR93418.1| CG5757-PA [Drosophila melanogaster]
gi|223967383|emb|CAR93422.1| CG5757-PA [Drosophila melanogaster]
Length = 211
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFDRICSKEGSYFHQFDARQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIANIT 195
>gi|407925805|gb|EKG18785.1| Thymidylate kinase [Macrophomina phaseolina MS6]
Length = 216
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 139/199 (69%), Gaps = 8/199 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+V EGLDR GKT+Q RL++ L+ LG V+ RFPDRTT +GQMI+AYL+ S +
Sbjct: 2 RGKLIVFEGLDRAGKTTQSGRLVTCLQELGQRVQHMRFPDRTTPIGQMINAYLTGASEQE 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE + +++ + GTT+++DRY YSG +S+AK + +EW + PE+
Sbjct: 62 DHVIHLLFSANRWEAAAKIKSLIAEGTTVVIDRYYYSGCVYSAAKDNPSLSLEWARHPEV 121
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV----AQCYQMLRD-SSWKIIDA 225
GL PD V++LDI PEKAA+RGG+G E+YE+ + Q++V A+ QM ++ + +DA
Sbjct: 122 GLPRPDLVIFLDISPEKAAQRGGFGSEKYENSKMQKRVRELFAEMKQMQQEGQDFVTVDA 181
Query: 226 CQSIEDVEKQLKEIVLDQV 244
+S V + ++E VL+ +
Sbjct: 182 GESEAVVARTVEEAVLEVI 200
>gi|401880710|gb|EJT45028.1| hypothetical protein A1Q1_06612 [Trichosporon asahii var. asahii
CBS 2479]
Length = 214
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 123/164 (75%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EGLDR GKT+Q RL++ L+ G L +FPDRTT +G+MI AYL +++ +D
Sbjct: 4 RGALIVFEGLDRSGKTTQVDRLIARLQKEGRKARLQKFPDRTTGIGKMIDAYLQSKAEMD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH IHLLFSANRWE S + A L AG +++VDRY++SG+AFS+AKG++ +C+AP++GL
Sbjct: 64 DHAIHLLFSANRWECVSSILASLDAGESVVVDRYAFSGLAFSAAKGLNFGYCQAPDVGLP 123
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
PD LYL + PE AA+RG YG ERYE++E Q++V + + + D
Sbjct: 124 LPDLTLYLTLSPEVAAQRGAYGQERYENVELQKEVRRQFAAVFD 167
>gi|195487624|ref|XP_002091984.1| GE13938 [Drosophila yakuba]
gi|194178085|gb|EDW91696.1| GE13938 [Drosophila yakuba]
Length = 211
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPALPMNFPERSSSIGQVINSYLTNSKDLK 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + M+ KL G TL+VDRYS+SGVA+SSAKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHMNQMKQKLLEGHTLVVDRYSFSGVAYSSAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + L S W DA Q ++
Sbjct: 126 KPDAVFYLRAPPNDLTNRGQYGEERYEKVEFQSRVAKVFDRLCANEASYWHQFDASQPVD 185
Query: 231 DVEKQLKEIV 240
++ ++ I
Sbjct: 186 ELHARIASIT 195
>gi|326480672|gb|EGE04682.1| thymidylate kinase [Trichophyton equinum CBS 127.97]
Length = 235
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVV+EGLDR GK++QC+RL +L GH + RFPDRTT++G+MI+ YL + LD
Sbjct: 12 RGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYLRGEIQLD 71
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA---KGIDIEWCKAPEI 170
DH +HLLFSANRWE + + +++G T+IVDRYSYSG +S+A K + ++W PE+
Sbjct: 72 DHAVHLLFSANRWEAAAQIRRDIESGITVIVDRYSYSGAVYSAAKENKELQLDWAWRPEV 131
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR----DSSWKIIDAC 226
GL PD +L+I E AA RGGYG ERYE + Q+KV + + L + +++DA
Sbjct: 132 GLPRPDIWFFLNISTEVAAARGGYGTERYETVNLQKKVGKLFLSLTGLKGNEDMRVVDAG 191
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+ I+++ ++++E VL + P L
Sbjct: 192 REIDEISREIQEEVLQTMAKVDSIGPLRRL 221
>gi|131840166|ref|YP_001096175.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|71068047|gb|AAZ23013.1| thymidylate kinase [Cyprinid herpesvirus 3]
gi|84181500|gb|ABC55103.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706741|gb|ABG42967.1| thymidylate kinase [Cyprinid herpesvirus 3]
gi|129560659|dbj|BAF48954.1| deoxythymidylate kinase [Cyprinid herpesvirus 3]
Length = 233
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 4/198 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++LEG+DR GK++QC L+ L +G EL RFPDRTT +GQMI++YL N+S LD
Sbjct: 20 RGALIILEGVDRSGKSTQCRMLVKALLEMGVEAELMRFPDRTTPIGQMINSYLLNKSDLD 79
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE S ++ KL GTT+++DRY++SGVAF++AK G ++EWCK ++GL
Sbjct: 80 DHVVHLLFSANRWEAASDLKRKLMKGTTIVLDRYAFSGVAFTAAKPGFELEWCKRTDVGL 139
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS---SWKIIDACQSI 229
PD V++L I RGG+G ERYE FQ V + +++L +W+ +DA ++
Sbjct: 140 PKPDLVVFLAIEASAVESRGGFGDERYEVSAFQAAVRENFEVLMKDVTVNWRKVDAARTP 199
Query: 230 EDVEKQLKEIVLDQVTAC 247
E V + + D A
Sbjct: 200 EQVHGDILRLTDDAHNAI 217
>gi|26353426|dbj|BAC40343.1| unnamed protein product [Mus musculus]
Length = 212
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++++YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++AKL G TL++DRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD +L+L + AA RG +G ER E FQ++V C+Q L ++ +WK++DA +SI
Sbjct: 125 PKPDLILFLQLQLLDAAARGEFGLERNETGTFQKQVLLCFQQLMEEKNLNWKVVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V K+++ D + + +P LW
Sbjct: 185 EEVHKEIRAHSEDAIRNAAQ-RPLGELW 211
>gi|116805954|emb|CAL26356.1| CG5757 [Drosophila melanogaster]
gi|116805960|emb|CAL26359.1| CG5757 [Drosophila melanogaster]
gi|116805962|emb|CAL26360.1| CG5757 [Drosophila melanogaster]
gi|116805964|emb|CAL26361.1| CG5757 [Drosophila melanogaster]
gi|116805966|emb|CAL26362.1| CG5757 [Drosophila melanogaster]
gi|116805968|emb|CAL26363.1| CG5757 [Drosophila melanogaster]
gi|116805972|emb|CAL26365.1| CG5757 [Drosophila melanogaster]
gi|116805974|emb|CAL26366.1| CG5757 [Drosophila melanogaster]
gi|116805976|emb|CAL26367.1| CG5757 [Drosophila melanogaster]
Length = 211
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRSPPNDLTHRGQYGKERYEKVEFQGRVAEVFDRICSKEGSYFHQFDARQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIASIT 195
>gi|440632592|gb|ELR02511.1| thymidylate kinase [Geomyces destructans 20631-21]
Length = 229
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 134/206 (65%), Gaps = 9/206 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V+EGLDR GKT+Q R+ + L G G+ V+L RFPDRTT +G+MI+ YL ++S L+
Sbjct: 9 RGPFIVVEGLDRSGKTTQTKRIEAALVGEGYKVKLRRFPDRTTVIGEMINNYLQSKSDLE 68
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH IHLLFSANRWE +E + G T+I DRY YSGV +S+AK + + W + PE+
Sbjct: 69 DHVIHLLFSANRWELAKQIEKDIADGYTVICDRYYYSGVVYSAAKSNPQLSLPWAREPEV 128
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK------IID 224
GL PD V++LD+ PE A ERGGYG E+YE E Q KV + + L DS + I D
Sbjct: 129 GLPRPDLVIFLDLEPEVAEERGGYGDEKYEKREMQEKVRKLFHALNDSEEEEASDMVIYD 188
Query: 225 ACQSIEDVEKQLKEIVLDQVTACKKG 250
A +S+E+V K + + V A K+G
Sbjct: 189 AGKSLEEVTKDVLQSVSSVSLAVKQG 214
>gi|229365992|gb|ACQ57976.1| Thymidylate kinase [Anoplopoma fimbria]
Length = 183
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 127/174 (72%), Gaps = 4/174 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D+ GKT+QC +L+ L+ G E+ RFPDRTT++GQ+ISAYL +S L+
Sbjct: 5 RGALIVLEGVDKAGKTTQCKKLVQALQQSGRPAEMMRFPDRTTTIGQLISAYLEKKSDLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE M KL+ G TL+VDRY++SGVAF+SAK G ++WC P++GL
Sbjct: 65 DHTVHLLFSANRWELVPQMRKKLEQGITLVVDRYAFSGVAFTSAKQGFCLDWCMKPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKII 223
PD V++L + P +A RG +G ERY FQR V Q + Q++++ S W++I
Sbjct: 125 PKPDLVIFLQLSPAEATLRGQFGEERYGTSVFQRAVQQRFEQLMKEPSVNWQVI 178
>gi|398392850|ref|XP_003849884.1| hypothetical protein MYCGRDRAFT_47065 [Zymoseptoria tritici IPO323]
gi|339469762|gb|EGP84860.1| hypothetical protein MYCGRDRAFT_47065 [Zymoseptoria tritici IPO323]
Length = 220
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 132/196 (67%), Gaps = 8/196 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRG L+V EGLDR GK++QC+RL+ +L G V RFPDRTT +GQMI++YLS S
Sbjct: 6 SRGHLIVFEGLDRSGKSTQCARLVDHLRSQGKEVFHQRFPDRTTVIGQMINSYLSGTSSQ 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
+DH IHLLFSANRWE + ++ GTT++VDRY YSG +S+AK +D+ WC+ PE
Sbjct: 66 EDHAIHLLFSANRWEASESIRQHIERGTTVVVDRYYYSGCVYSAAKQNPAMDLAWCRHPE 125
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR---DSSWKI--ID 224
IGL PD L+LDI E+AA+RGG+G ERYE E Q +V + L+ D + I ID
Sbjct: 126 IGLPRPDLCLFLDIAAEEAAKRGGFGTERYEKQELQDRVRDLFAELQTHPDEAEDIVVID 185
Query: 225 ACQSIEDVEKQLKEIV 240
A QS+E VE+ + + V
Sbjct: 186 AGQSVETVEQSIHDAV 201
>gi|328867446|gb|EGG15828.1| thymidylate kinase [Dictyostelium fasciculatum]
Length = 214
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 129/194 (66%), Gaps = 2/194 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG ++ EG DR GK++Q +L YL+ GL ++ RFPDRTT G +I+ YL N + L
Sbjct: 10 RGLFILFEGADRVGKSTQVQKLGDYLKNGLQLDAKVLRFPDRTTPTGSIINGYLQNTTQL 69
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD IHLL++ANRWE + + L +GT+++VDRYSYSGVA+++AKGID++WC E GL
Sbjct: 70 DDRAIHLLYAANRWEAKDNLMKLLNSGTSIVVDRYSYSGVAYTAAKGIDVDWCFNCEKGL 129
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
PD V+YL + E A RG YG ERYE ++FQ K+ Q Y Q L SWK+I+A + I+
Sbjct: 130 PEPDLVIYLKMTTEDATLRGEYGTERYEKVDFQNKIKQIYEQHLIKPSWKVINANRDIDT 189
Query: 232 VEKQLKEIVLDQVT 245
V ++ I+ ++
Sbjct: 190 VSNEINNIIKTEIN 203
>gi|223967381|emb|CAR93421.1| CG5757-PA [Drosophila melanogaster]
gi|223967389|emb|CAR93425.1| CG5757-PA [Drosophila melanogaster]
gi|223967393|emb|CAR93427.1| CG5757-PA [Drosophila melanogaster]
Length = 211
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL PP RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRSPPNDLTYRGQYGKERYEKVEFQGRVAEVFDRICSKEGSYFHQFDARQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIASIT 195
>gi|16975316|pdb|1E9F|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Adp
Length = 217
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 145/210 (69%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 8 RGALIVLEGVDGAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 127
Query: 173 LAPDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQ 227
PD VL+L + AA+RG G ERYE+ FQ + +C+ Q+++D++ WK++DA +
Sbjct: 128 PKPDLVLFLQLQLADAAKRGRARGELERYENGAFQERALRCFHQLMKDTTLNWKMVDASK 187
Query: 228 SIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
SIE V + ++ + D + + KP LW
Sbjct: 188 SIEAVHEDIRVLSEDAIATATE-KPLGELW 216
>gi|116805978|emb|CAL26368.1| CG5757 [Drosophila simulans]
Length = 211
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHMNQVKQKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL P RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRAPSNDLTNRGQYGEERYEKVEFQSRVAEVFDRICSKEASYFHKFDATQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIGSIT 195
>gi|405119073|gb|AFR93846.1| thymidylate kinase [Cryptococcus neoformans var. grubii H99]
Length = 217
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 8/200 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V EGLDRCGK++Q RL+ LE GH L +FPDRTT +G+MI AYL +++ +
Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDRLVQRLEHQGHRARLQKFPDRTTQIGKMIDAYLQSKTEI 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD IHLLFSANRWE + + L G T+I DRY++SG+AFS AKG+ ++C P+ GL
Sbjct: 65 DDRAIHLLFSANRWECSATIRRDLANGVTVIADRYAFSGIAFSVAKGLPFDFCLQPDAGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD--------SSWKIID 224
PD LYL + PE AA+R YG ERYE + Q+ V Q ++++ D W I+
Sbjct: 125 PLPDVTLYLTLSPEAAAKRSAYGEERYESVSVQQAVRQQFKLVADEIKKRHGSDKWIEIE 184
Query: 225 ACQSIEDVEKQLKEIVLDQV 244
A +IEDVE+++ + D V
Sbjct: 185 ADGTIEDVEERIWSQISDVV 204
>gi|345569862|gb|EGX52688.1| hypothetical protein AOL_s00007g471 [Arthrobotrys oligospora ATCC
24927]
Length = 227
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 138/213 (64%), Gaps = 15/213 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+ +EGLDR GK++QC LL L G +L +FPDRTT +G MI++YL++ S+LD
Sbjct: 8 RGALIAIEGLDRAGKSTQCDLLLKRLLSSGIPAKLQKFPDRTTPIGTMINSYLTSTSNLD 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---------GIDIEW 164
D IHLLFSANRWE R + + L +GTTL++DRY YSG+ FS+AK + I W
Sbjct: 68 DQAIHLLFSANRWEARDHLLSSLNSGTTLLLDRYIYSGIVFSAAKPPTPVQNPNPLSISW 127
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR------DS 218
CK+P+IGL PD +++L+I E A +R G+G ERYE E Q KV + ++ LR
Sbjct: 128 CKSPDIGLPRPDIIIFLNISQEDAEKRAGFGDERYEKRELQDKVRRLFEELRGEGSNDKD 187
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
W ++DA ++E+V ++ + VL+ + K+G
Sbjct: 188 DWWVVDAGGTVEEVADEVWKGVLEGLKRVKEGN 220
>gi|355750994|gb|EHH55321.1| hypothetical protein EGM_04505 [Macaca fascicularis]
Length = 212
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 140/208 (67%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L F +R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVETLXXXXXXXXXXXFLERSTEIGKLLSSYLEKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH +HLLFSANRWE+ +++ KL G TLIVDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG YG ERYE+ FQ + QC+ Q++RD++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQLMRDATLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIHTATE-KPLGELW 211
>gi|123438337|ref|XP_001309954.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
gi|121891703|gb|EAX97024.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
Length = 194
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+ +RG ++ EG D GK++QC L + GL VE FPDRTT +GQMI+AYL S
Sbjct: 1 MSTRGKFILFEGCDGSGKSTQCKLLAN--SGLFPKVEQMCFPDRTTEIGQMINAYLKKSS 58
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+L D IHLLF+ANRWE ++ L GTT+I DRY YSGV +S+AKG+D++WC APE
Sbjct: 59 NLVDEAIHLLFTANRWELSPKIKELLNNGTTIICDRYYYSGVVYSAAKGMDVDWCLAPEK 118
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIE 230
GL PD V+++DI PE A+R G+G E YE EFQ KV + + L+D W+IID Q +E
Sbjct: 119 GLPQPDLVIFIDISPEVQAKRKGFGEEIYEKTEFQNKVRELFLSLKDDRWRIIDGNQPLE 178
Query: 231 DVEKQLKEIV 240
V + +++++
Sbjct: 179 KVSEDIQKVI 188
>gi|315049351|ref|XP_003174050.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
gi|311342017|gb|EFR01220.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
Length = 237
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 135/210 (64%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVV+EGLDR GK++QC+RL +L GH + RFPDRTTS+G+MI+ YL + LD
Sbjct: 14 RGALVVVEGLDRAGKSTQCTRLHQFLVDQGHKAKYIRFPDRTTSIGKMINQYLRAEIQLD 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA---KGIDIEWCKAPEI 170
DH +HLLFSANRWE + + ++AG T+IVDRYSYSG +S+A K + ++W PE+
Sbjct: 74 DHAVHLLFSANRWEAAAQIRQDIEAGITVIVDRYSYSGAVYSAAKENKELQLDWAWRPEV 133
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR----DSSWKIIDAC 226
GL PD +L+I E AA RGGYG ERYE + Q++V + + L + +I+DA
Sbjct: 134 GLPRPDIWFFLNISTEVAAARGGYGTERYETVNLQQRVGKLFLSLSGLKGNEDMRIVDAG 193
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+ ++++ +++ VL +T P L
Sbjct: 194 REMDEISSDIRDEVLQTMTKIDSIGPLRRL 223
>gi|195584457|ref|XP_002082023.1| GD25418 [Drosophila simulans]
gi|194194032|gb|EDX07608.1| GD25418 [Drosophila simulans]
Length = 211
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++ KL GTTL+VDRYS+SGVA+S+AKG+D +WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHMNQVKQKLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL P RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 126 KPDAVFYLRAPSNDLTNRGQYGEERYEKVEFQGRVAEVFDRICSKEASYFHKFDATQSVE 185
Query: 231 DVEKQLKEIV 240
D+ Q+ I
Sbjct: 186 DLHAQIGSIT 195
>gi|170097605|ref|XP_001880022.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645425|gb|EDR09673.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 228
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 138/225 (61%), Gaps = 21/225 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
R +V+EGLDR GKT+Q S L + LE G +L +FPDRTT +GQMI +YL + S LD
Sbjct: 2 RAPFIVIEGLDRSGKTTQTSLLHTRLEAEGIQAKLMKFPDRTTVIGQMIDSYLRSDSELD 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---------DIEW 164
DH IHLLFSANRWE S + L+AGT +I DRY++SG+AFS++KGI EW
Sbjct: 62 DHVIHLLFSANRWELASYITQLLEAGTPIICDRYAFSGIAFSASKGIPSSTPSPKLPYEW 121
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD------- 217
C++P+IGL APD VL+LDI PE+A RGGYG ERYE E Q +V +Q L
Sbjct: 122 CRSPDIGLPAPDLVLFLDIAPERAKLRGGYGEERYEKEELQARVRGIFQRLGSEMQNETQ 181
Query: 218 ----SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
+W +DA + + V ++ +V + + + P + LWS
Sbjct: 182 RPVRPNWVTVDAGRERKVVANEVWSLV-EPLVINRIDDPVAKLWS 225
>gi|119183198|ref|XP_001242660.1| hypothetical protein CIMG_06556 [Coccidioides immitis RS]
gi|392865564|gb|EAS31362.2| thymidylate kinase [Coccidioides immitis RS]
Length = 228
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 132/203 (65%), Gaps = 7/203 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK++QC+ L+ L GH + RFPDRTTS+G++I YL ++ L
Sbjct: 15 ARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLRGETQL 74
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPE 169
DDH IHLLFSANRWE S + + G ++++DRYSYSG +S+AK + +EW PE
Sbjct: 75 DDHAIHLLFSANRWELASQIRQDISNGISIVIDRYSYSGAVYSAAKNNRELSLEWAWQPE 134
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ----MLRDSSWKIIDA 225
IGL PD +L+I PE+A RGGYG ERYE++ Q +V + ++ M + +IIDA
Sbjct: 135 IGLPRPDLWFFLNISPEEAESRGGYGLERYENVTLQLRVGELFKSMQGMENNEEMRIIDA 194
Query: 226 CQSIEDVEKQLKEIVLDQVTACK 248
QS E V + + VL V + +
Sbjct: 195 NQSKEQVARDISAQVLSAVDSIE 217
>gi|327301613|ref|XP_003235499.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
gi|326462851|gb|EGD88304.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
Length = 235
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 136/210 (64%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVV+EGLDR GK++QC+RL +L GH + RFPDRTTS+G+MI+ YL + LD
Sbjct: 12 RGALVVVEGLDRAGKSTQCARLHQFLVDQGHKTKYIRFPDRTTSIGKMINQYLRGEIQLD 71
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA---KGIDIEWCKAPEI 170
DH +HL+FSANRWE + ++ +++G T+IVDRYSYSG +S+A K + ++W PE+
Sbjct: 72 DHAVHLVFSANRWEAAAQIQRDIESGITVIVDRYSYSGAVYSAAKENKELQLDWAWRPEV 131
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR----DSSWKIIDAC 226
GL PD +L++ E AA RGGYG ERYE + Q+KV + + L + +I+DA
Sbjct: 132 GLPRPDIWFFLNVSTEVAAARGGYGTERYETVNLQKKVGKLFLSLTGLKGNEDMRIVDAG 191
Query: 227 QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+ ++++ +++E VL + P L
Sbjct: 192 REVDEISHEIREEVLQTMAKLDSIGPLRKL 221
>gi|194755687|ref|XP_001960115.1| GF13205 [Drosophila ananassae]
gi|190621413|gb|EDV36937.1| GF13205 [Drosophila ananassae]
Length = 211
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 124/189 (65%), Gaps = 3/189 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EG DR GK++Q RL L+ G E FPDR+T +GQ+I++YL+N L
Sbjct: 6 RGALIVFEGCDRSGKSTQSRRLAELLKSRGIPTESLNFPDRSTDIGQVINSYLTNSKDLQ 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFS NRWE + KL AGTTLIVDRYSYSGVA+S AKG+D +WC APE GL+
Sbjct: 66 DEVIHLLFSVNRWELMGKLRQKLLAGTTLIVDRYSYSGVAYSVAKGMDFDWCYAPERGLI 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL P++ AER +G ERYE +EFQ +V+ Y + + W +DA + +
Sbjct: 126 KPDAVFYLRAVPDRLAERSEFGEERYEKVEFQSRVSAVYDRIFSNESTYWHQLDASVTAD 185
Query: 231 DVEKQLKEI 239
++ + EI
Sbjct: 186 ELHFLIAEI 194
>gi|452982252|gb|EME82011.1| hypothetical protein MYCFIDRAFT_77678 [Pseudocercospora fijiensis
CIRAD86]
Length = 227
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 138/211 (65%), Gaps = 8/211 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+V EGLDR GK++QC+RL +L+ H V RFPDRTTS+GQMI++YLS S +
Sbjct: 14 RGHLIVFEGLDRSGKSTQCARLAQHLQSRAHKVHAHRFPDRTTSIGQMINSYLSGSSSQE 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE ++ + +GTT+++DRY YSG +S+AK +D+ WC+ E+
Sbjct: 74 DHAIHLLFSANRWEAAERIKELINSGTTVVIDRYYYSGCVYSAAKQNPTMDLAWCRHMEV 133
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY---QMLRDSSWKI--IDA 225
GL PD L+LDI E AA+RGG+G ERYE E Q +V + + Q D I IDA
Sbjct: 134 GLPRPDLCLFLDISTELAAKRGGFGTERYEKQEMQDRVRELFREMQTHEDEKEDIVRIDA 193
Query: 226 CQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
S+E+VEK +++ V +++ + + P +
Sbjct: 194 GASMEEVEKMIQKTVQEKLGSKSQLGPLRYI 224
>gi|453083655|gb|EMF11700.1| thymidylate kinase [Mycosphaerella populorum SO2202]
Length = 227
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 135/200 (67%), Gaps = 8/200 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+V EGLDR GK++QC+RL+ +L V+ RFP+R+T +GQMI+ YL S+ +
Sbjct: 13 RGRLIVFEGLDRSGKSTQCARLVDHLTARNQKVKHMRFPNRSTVIGQMINNYLVGSSNQE 72
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE ++ ++AGTT+++DRY YSG +S+AK +D+ WC+ PE+
Sbjct: 73 DHAIHLLFSANRWEAADEIQQHVQAGTTVVIDRYYYSGCVYSAAKQNPTMDLAWCRHPEV 132
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK-----IIDA 225
GL PD L+LDI E AA+RGG+G ERYE E Q +V ++ +R + ++DA
Sbjct: 133 GLPRPDLCLFLDISAEDAAQRGGFGSERYEKQEMQDRVRSLFKEMRTHPDEADDIVVVDA 192
Query: 226 CQSIEDVEKQLKEIVLDQVT 245
+S+++V K ++ IV DQ +
Sbjct: 193 GKSVDEVAKIIERIVDDQFS 212
>gi|242792112|ref|XP_002481887.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
gi|218718475|gb|EED17895.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
Length = 238
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 141/226 (62%), Gaps = 13/226 (5%)
Query: 44 SSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMIS 103
+ L + + RGALVV+EGLDR GK+SQC L L G+ + + RFPDR+T +G+ I
Sbjct: 2 AELSASDKEKRGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQID 61
Query: 104 AYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---I 160
+YL QS LDDH+IHLLFSANRWE + + GTT+IVDRYSYSG +S+AKG +
Sbjct: 62 SYLRGQSQLDDHSIHLLFSANRWELAQSIHEYIANGTTVIVDRYSYSGAVYSAAKGNPNL 121
Query: 161 DIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSW 220
+ W PE+GL PD L+L I PE+AA+RGGYG ERYE Q++V + + L D
Sbjct: 122 SLHWAWQPEVGLPRPDLCLFLSISPEEAAKRGGYGVERYETDSMQKRVRELFLSLLDLPH 181
Query: 221 K----IIDACQSIEDVEKQLKEIVL------DQVTACKKGKPFSLL 256
+IDA QS+++V + + + VL D + KK P++ +
Sbjct: 182 NDEICVIDAGQSVDEVAQDILDPVLECMKNVDSIGPLKKLGPWTFI 227
>gi|321254063|ref|XP_003192951.1| thymidylate kinase [Cryptococcus gattii WM276]
gi|317459420|gb|ADV21164.1| thymidylate kinase, putative [Cryptococcus gattii WM276]
Length = 217
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 131/200 (65%), Gaps = 8/200 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V EGLDRCGK++Q L+ LE G L +FPDRTT +G+MI AYL +++ +
Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDHLVQRLERQGRRARLQKFPDRTTQIGKMIDAYLQSKTEI 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DDH IHLLFSANRWE + + L +G T+I DRY++SG+AFS+AKG+ ++C P+ GL
Sbjct: 65 DDHAIHLLFSANRWECSAAIRRDLASGITVIADRYAFSGIAFSAAKGLCFDFCLQPDAGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD--------SSWKIID 224
PD+ LYL +PPE AA R YG ERYE + Q+ V Q ++++ + W ID
Sbjct: 125 PLPDATLYLTLPPETAARRSAYGEERYESVSIQQAVRQQFKLVANEIKKRHGADKWIEID 184
Query: 225 ACQSIEDVEKQLKEIVLDQV 244
A +I DV++++ + D V
Sbjct: 185 ADGTITDVKERVWSQISDVV 204
>gi|392577333|gb|EIW70462.1| hypothetical protein TREMEDRAFT_38210 [Tremella mesenterica DSM
1558]
Length = 220
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 8/194 (4%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
I RGA +V EGLDR GK++Q +++ L+ G V L +FPDRTT +G MI AYL
Sbjct: 4 IAMTSQRGAFIVFEGLDRSGKSTQVGAVVARLQREGRKVRLQKFPDRTTRIGGMIDAYLQ 63
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
++S LDDH+IHLLFSANRWE + +E + +GT +I DRY++SG+AFS+AKG+ ++C
Sbjct: 64 SKSELDDHSIHLLFSANRWECANAIERDVSSGTIVIADRYAFSGIAFSAAKGLSFQYCLN 123
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR--------DSS 219
P+ GL PD +YL + PE AA RG YG ERYE LE Q++V + + ++ D
Sbjct: 124 PDTGLPLPDRTVYLTLSPEVAASRGAYGEERYETLEMQKRVREQFTLVAEETRRRHGDDR 183
Query: 220 WKIIDACQSIEDVE 233
W I+A ++E+VE
Sbjct: 184 WAEINADGTVEEVE 197
>gi|212535132|ref|XP_002147722.1| thymidylate kinase [Talaromyces marneffei ATCC 18224]
gi|210070121|gb|EEA24211.1| thymidylate kinase [Talaromyces marneffei ATCC 18224]
Length = 238
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 137/218 (62%), Gaps = 13/218 (5%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ RGALVV+EGLDR GK+SQC L L G+ + + RFPDR+T +G+ I +YL +S
Sbjct: 10 EKRGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLRGESQ 69
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAP 168
LDDH+IHLLFSANRWE ++ + GTT+IVDRYSYSG +S+AKG + + W P
Sbjct: 70 LDDHSIHLLFSANRWEVAQSIQKDIADGTTVIVDRYSYSGAVYSAAKGNPNLSLHWAWQP 129
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK----IID 224
E+GL PD L+L I PE+AA+RGGYG ERYE Q++V + L D +ID
Sbjct: 130 EVGLPRPDLCLFLSISPEEAAKRGGYGVERYETDSMQKRVRDLFLSLLDLPHNDEICVID 189
Query: 225 ACQSIEDVEKQLKEIVL------DQVTACKKGKPFSLL 256
A QS+++V + E VL D + KK P++ +
Sbjct: 190 AGQSVDEVALDILEPVLECMKNVDSIGPLKKLGPWTFI 227
>gi|226287197|gb|EEH42710.1| thymidylate kinase [Paracoccidioides brasiliensis Pb18]
Length = 232
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 132/195 (67%), Gaps = 7/195 (3%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
GN RGAL+V+EGLDR GK++QC+ L L+ GH V+ RFPDRTT++G++I+AYL
Sbjct: 7 GNKTQRGALIVVEGLDRAGKSTQCALLQKTLQREGHEVKYRRFPDRTTAIGKLINAYLVG 66
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWC 165
S LDDH+IHLLFSANRWE ++ + G ++I+DRYSYSG +S+AK G+ ++W
Sbjct: 67 DSQLDDHSIHLLFSANRWEAAKEIQKDISNGISIIIDRYSYSGAVYSAAKDVPGLSLDWA 126
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWK-- 221
PEIGL PD L+L+I PE+AA RGGYG ERYE+ Q +V Q +Q R+
Sbjct: 127 WQPEIGLPQPDIWLFLNISPEEAARRGGYGLERYENDILQARVRQLFQTFIEREDPANVC 186
Query: 222 IIDACQSIEDVEKQL 236
+I+A +S DV + +
Sbjct: 187 VINAGRSEADVAQDI 201
>gi|303319671|ref|XP_003069835.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109521|gb|EER27690.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320034114|gb|EFW16059.1| thymidylate kinase [Coccidioides posadasii str. Silveira]
Length = 228
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 131/203 (64%), Gaps = 7/203 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK++QC+ L+ L GH + RFPDRTTS+G++I YL ++ L
Sbjct: 15 ARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLRGETQL 74
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPE 169
DDH IHLLFSANRWE S + + G ++++DRYSYSG +S+AK + +EW E
Sbjct: 75 DDHAIHLLFSANRWELASQIRQDISNGISIVIDRYSYSGAVYSAAKNNRELSLEWAWQSE 134
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ----MLRDSSWKIIDA 225
IGL PD +L+I PEKA RGGYG ERYE++ Q +V + ++ M + +IIDA
Sbjct: 135 IGLPRPDLWFFLNISPEKAESRGGYGLERYENVTLQLRVGELFKSMQGMENNEEMRIIDA 194
Query: 226 CQSIEDVEKQLKEIVLDQVTACK 248
QS E V + + VL V + +
Sbjct: 195 NQSKEQVARDISAQVLAAVDSIE 217
>gi|451993659|gb|EMD86131.1| hypothetical protein COCHEDRAFT_1198102 [Cochliobolus
heterostrophus C5]
gi|451999805|gb|EMD92267.1| hypothetical protein COCHEDRAFT_1173969 [Cochliobolus
heterostrophus C5]
Length = 216
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 131/193 (67%), Gaps = 7/193 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+V EGLDR GK++QC +L++ L+ G V RFPDRTT +GQMI++YLS QS
Sbjct: 2 ARGKLIVFEGLDRAGKSTQCEKLVADLQNDGIKVRHMRFPDRTTPIGQMINSYLSGQSDQ 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
+DH IHLLFSANRWE + A L AGTT+I+DRY YSG +S+AK + +EWC+ P+
Sbjct: 62 EDHVIHLLFSANRWETAPSIRANLAAGTTVIIDRYYYSGCVYSAAKQNPNMSLEWCRQPD 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDA 225
+GL PD L+LDI + AA+RGG+G E+YE + Q +V + ++ L + IDA
Sbjct: 122 VGLPRPDLCLFLDISADDAAKRGGFGTEKYEKKDMQDRVRELFETLMQKKEGEDFVRIDA 181
Query: 226 CQSIEDVEKQLKE 238
S+E+V +++E
Sbjct: 182 GASLEEVAAKVRE 194
>gi|342320529|gb|EGU12469.1| Deoxythymidylate kinase Thymidylate kinase [Rhodotorula glutinis
ATCC 204091]
Length = 228
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 125/187 (66%), Gaps = 4/187 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V EGLDR GK++Q RL+ L G + RFPDRT S G+MI +YLS ++ LD
Sbjct: 12 RGAFIVFEGLDRSGKSTQVQRLVDALNARGVQTKGARFPDRTLSTGKMIDSYLSQKADLD 71
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE+ S + L+ G T++ DRY++SG+AFS+ KG+ WC+AP++GL
Sbjct: 72 DRAIHLLFSANRWERASQILEDLRNGVTVVCDRYAFSGIAFSAIKGLSWNWCRAPDVGLP 131
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS----SWKIIDACQSI 229
PD VL+L + PE A +RGG+G ERYE E Q KV + + L S W IDA + +
Sbjct: 132 QPDLVLFLRVSPEVAQQRGGFGQERYETSEVQAKVEKAFTKLGQSVGKDVWTEIDADKGV 191
Query: 230 EDVEKQL 236
++V +++
Sbjct: 192 DEVHEEI 198
>gi|19076042|ref|NP_588542.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe 972h-]
gi|14286144|sp|P36590.2|KTHY_SCHPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|3192027|emb|CAA19357.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe]
Length = 210
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 6/194 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+V+EGLDR GK++QC L+ L EL++FPDRTT++G+ I YL L
Sbjct: 5 NRGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKESVQL 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+D IHLLFSANRWE + ++ G T I+DRY++SG+AFS+AKG+D EWCK+P+ GL
Sbjct: 65 NDQVIHLLFSANRWETIQYIYEQINKGVTCILDRYAFSGIAFSAAKGLDWEWCKSPDRGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKII--DAC 226
PD V++L++ P AA RG YG ERYE +E Q KV + +Q L R+ + I DA
Sbjct: 125 PRPDLVIFLNVDPRIAATRGQYGEERYEKIEMQEKVLKNFQRLQKEFREEGLEFITLDAS 184
Query: 227 QSIEDVEKQLKEIV 240
S+EDV Q+ ++V
Sbjct: 185 SSLEDVHSQIVDLV 198
>gi|295666950|ref|XP_002794025.1| thymidylate kinase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277678|gb|EEH33244.1| thymidylate kinase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 232
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
GN RGAL+V+EGLDR GK++QC+ L L+ GH V+ RFP+RTT++G++I+AYL
Sbjct: 7 GNEGQRGALIVVEGLDRAGKSTQCALLQKTLQQEGHEVKYRRFPNRTTAIGKLINAYLVG 66
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWC 165
SHLDDH+IHLLFSANRWE + + G ++I+DRYSYSG +S+AK G+ ++W
Sbjct: 67 DSHLDDHSIHLLFSANRWEAAKEIRKDISNGISIIIDRYSYSGAVYSAAKDVPGLSLDWA 126
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
PEIGL PD L+L+I PE+AA RGGYG ERYE+ Q +V Q +Q
Sbjct: 127 WQPEIGLPQPDIWLFLNISPEEAARRGGYGLERYENDILQARVRQLFQTF 176
>gi|258571125|ref|XP_002544366.1| thymidylate kinase [Uncinocarpus reesii 1704]
gi|237904636|gb|EEP79037.1| thymidylate kinase [Uncinocarpus reesii 1704]
Length = 212
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 132/194 (68%), Gaps = 7/194 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+V+EGLDR GK++QC+ L+ L +G+ RFPDRTTS+G++I YL + L
Sbjct: 2 TRGALIVMEGLDRAGKSTQCAVLVDKLREMGYKTNYIRFPDRTTSIGKIIDGYLRGEVQL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPE 169
+DH IHLLFSANRWE S + + G ++++DRYSYSG +S+AKG + ++W PE
Sbjct: 62 EDHAIHLLFSANRWELASRIHEDISNGISIVIDRYSYSGAVYSAAKGNKDLSLDWAWRPE 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR----DSSWKIIDA 225
IGL PD +L++ PE+A RGGYG ERYE++ Q +V + ++ L+ + +I+DA
Sbjct: 122 IGLPRPDMWFFLNVSPEEAERRGGYGLERYENVTLQLRVGKLFKSLQGMENNEEMRIVDA 181
Query: 226 CQSIEDVEKQLKEI 239
QS E+V +Q+ E+
Sbjct: 182 NQSKEEVAQQIFEL 195
>gi|452820201|gb|EME27247.1| dTMP kinase [Galdieria sulphuraria]
Length = 236
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 128/198 (64%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+VLEGLD+ GKT+Q L L G V FPDRTTS GQ+IS++L Q+ L
Sbjct: 28 SRGALIVLEGLDKSGKTTQIKSCLEILRADGFDVCQLSFPDRTTSTGQLISSFLREQTML 87
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD +HLLFSANRWEK M L GT+++VDRY+YSGVA++++KG D++WC P+ G
Sbjct: 88 DDRAVHLLFSANRWEKWKEMNDWLSNGTSILVDRYAYSGVAYTASKGYDLDWCLGPDKGF 147
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
+APD V+YL P R GYG ERYE+ FQ +V++ + L+ W + + + IE++
Sbjct: 148 IAPDLVVYLSAPSTVLQGRSGYGEERYENKAFQSRVSETFGKLKTKKWLTVQSDRPIEEI 207
Query: 233 EKQLKEIVLDQVTACKKG 250
+ + + + +C+ G
Sbjct: 208 THDIITPMRNIIRSCQSG 225
>gi|395332035|gb|EJF64415.1| thymidylate kinase [Dichomitus squalens LYAD-421 SS1]
Length = 230
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 10/213 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V+EGLDR GK++Q + L L+ G V L +FPDRTT +G++I +YL + S +D
Sbjct: 7 RGAFIVVEGLDRSGKSTQVALLEERLKAEGVPVRLVKFPDRTTPIGKLIDSYLRSGSEMD 66
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
D IHLLFSANRWE M+ L++GTT++ DRY++SG+AFS+AK G+ EWC+ P+I
Sbjct: 67 DRAIHLLFSANRWELAKSMQDSLESGTTVVCDRYAFSGIAFSAAKNAPGMSYEWCRGPDI 126
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-----QMLRDSSWKIIDA 225
L APD L+L + PE+ RGG+G ERYE +FQ +V + +M S W +DA
Sbjct: 127 ALPAPDVTLFLAVSPEQQHTRGGFGEERYEKSDFQERVEHVFERIGVEMGDGSRWFAVDA 186
Query: 226 CQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
Q E+V +++ +V Q A +P + LW+
Sbjct: 187 DQGKEEVAQEVWRLV--QPLAKGTDRPLARLWA 217
>gi|241613926|ref|XP_002407467.1| thymidylate kinase, putative [Ixodes scapularis]
gi|215502816|gb|EEC12310.1| thymidylate kinase, putative [Ixodes scapularis]
Length = 214
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VV EG DR GKT+Q L L LGH E FP+R+T+ G ++ +YL + LD
Sbjct: 6 RGLFVVFEGCDRTGKTTQIKLLSESLSKLGHKTETVAFPNRSTTTGTLLDSYLKASTDLD 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH +HLLFSANRWE + + L TT+I DRY+YSGVAFS+AK +D WC+ ++GL
Sbjct: 66 DHAVHLLFSANRWEAAPSLLSTLARNTTVIADRYAYSGVAFSAAKSLDFRWCQQCDVGLP 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-----RDSSWKIIDACQS 228
PD VLY+ +PPE A RGG+G ERYE+ FQ KV Y L + W +D +S
Sbjct: 126 EPDLVLYMSVPPETLAARGGFGEERYENSSFQEKVRANYNHLASLEAKGGRWIEVDCSKS 185
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
+++V ++ +VL+ +T K+ LWS
Sbjct: 186 VQEVHHIIESVVLEALT--KERADVGKLWS 213
>gi|392589555|gb|EIW78885.1| thymidylate kinase [Coniophora puteana RWD-64-598 SS2]
Length = 221
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 131/216 (60%), Gaps = 15/216 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL---EGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
RG +V EGLDR GK++Q L L G S +FPDRTT +GQ+I +YL Q+
Sbjct: 7 RGMFIVFEGLDRSGKSTQVELLRQELIRESGSDTSTVTMKFPDRTTPIGQIIDSYLQQQT 66
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
LDD IHLLFSANRWE S + + L++G T+IVDRY++SGVAFS KG EWC++P+
Sbjct: 67 SLDDQAIHLLFSANRWEDASDIMSHLESGVTVIVDRYAFSGVAFSLQKGFSYEWCQSPDR 126
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS------SWKIID 224
GL APD +L+LDI PE A RGGYG ERYE + Q+ V + + +++ W ID
Sbjct: 127 GLPAPDLILFLDINPEVAGSRGGYGDERYEQKKVQKSVLEAFSCVKNEVIKEGYKWVDID 186
Query: 225 ACQSIEDVEKQLKEIVLDQV--TACKKGKPFSLLWS 258
A Q + Q+K+ VL V A + P LW+
Sbjct: 187 ASQGV----NQVKDAVLKAVREAASQVNGPVRQLWA 218
>gi|380795897|gb|AFE69824.1| thymidylate kinase isoform 1, partial [Macaca mulatta]
Length = 196
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 134/196 (68%), Gaps = 5/196 (2%)
Query: 66 CGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANR 125
GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++DH +HLLFSANR
Sbjct: 1 AGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVEDHAVHLLFSANR 60
Query: 126 WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIP 184
WE+ +++ KL G TLIVDRY++SGVAF+ AK ++WCK P++GL PD VL+L +
Sbjct: 61 WEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQ 120
Query: 185 PEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIEDVEKQLKEIVL 241
AA+RG YG ERYE+ FQ + QC+ Q++RD++ WK++DA +SIE V + ++ +
Sbjct: 121 LADAAKRGAYGHERYENRAFQERALQCFHQLMRDTTLNWKMVDASKSIEAVHEDIRVLSE 180
Query: 242 DQVTACKKGKPFSLLW 257
D + + KP LW
Sbjct: 181 DAIHTATE-KPLGELW 195
>gi|326925774|ref|XP_003209084.1| PREDICTED: thymidylate kinase-like isoform 2 [Meleagris gallopavo]
Length = 188
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 131/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q RL+ L+ GH +L RFP+RTT +G++I AYLS + L+
Sbjct: 5 RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLSRERELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH +HLLFSANRWE + M+ KL G TL+VDRY++SGVAF+SAK
Sbjct: 65 DHVVHLLFSANRWEHVTSMKEKLHQGITLVVDRYAFSGVAFTSAK--------------- 109
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS---SWKIIDACQSIE 230
++ PE+AA RG +G ERYE+ FQ+KV Q + L + +WK +DA +SIE
Sbjct: 110 --------ELSPEEAAARGNFGRERYENGPFQKKVLQSFHHLMNEKTLNWKTMDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
D+ +++K V ++ K KP LW
Sbjct: 162 DLHREIK-TVAEKTMQEVKDKPLGELW 187
>gi|348690421|gb|EGZ30235.1| hypothetical protein PHYSODRAFT_263927 [Phytophthora sojae]
Length = 214
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 128/197 (64%), Gaps = 6/197 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEG--LGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
RG V+ EG+DRCGKT+Q L L L FPDR+T++GQ I +YL++
Sbjct: 4 RGIFVLFEGVDRCGKTTQTKLLHEALNASSPAQPSALLHFPDRSTAIGQSIHSYLTSSEA 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEI 170
+DDH IHLLFSANRWE S +E+ L +G +I+DRYS+SGVAFS+AK G+ ++WC APEI
Sbjct: 64 MDDHAIHLLFSANRWEAASKIESLLASGQHIIMDRYSFSGVAFSAAKSGMSLDWCWAPEI 123
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDACQ 227
GL PD+V++LD+P +A+ R +G ERYE FQ KV Q + + + + W ++DA
Sbjct: 124 GLPKPDAVIFLDVPVTQASTRADFGQERYETTAFQEKVYQNFHDIMERTTPKWHVVDATG 183
Query: 228 SIEDVEKQLKEIVLDQV 244
+IE V ++ I D +
Sbjct: 184 TIEQVHDEVMAITKDTI 200
>gi|395528690|ref|XP_003766460.1| PREDICTED: thymidylate kinase isoform 2 [Sarcophilus harrisii]
Length = 188
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 137/207 (66%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++QC +L++ L GH EL RFP+R+T +G+++SAYL +S+++
Sbjct: 5 RGALIVLEGMDRAGKSTQCRKLVTTLLESGHRAELLRFPERSTEIGKLLSAYLEKKSNME 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DHT+HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTSAK--------------- 109
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC-YQMLRDSS--WKIIDACQSIE 230
++ ++AA+RG +G ERYE+ FQ K QC YQ+++D S WK I+A QSIE
Sbjct: 110 --------ELSSQEAAKRGDFGTERYENNAFQEKALQCFYQLMKDDSLNWKTINASQSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
D+ K++ + + + ++ P LW
Sbjct: 162 DLHKEIYSLAEETIQMVQE-TPMGELW 187
>gi|67902452|ref|XP_681482.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
gi|40739679|gb|EAA58869.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
Length = 227
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 137/222 (61%), Gaps = 11/222 (4%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT----TSVGQMISA 104
G RGAL+V+EGLDR GK+SQC L + L+ G V+ RFP + T ++I
Sbjct: 5 GTHGGRGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPGDSSFARTLRRKLIDG 64
Query: 105 YLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---ID 161
YL QSHLDDH+IHLLFSANRWE +EA + GT++I+DRYSYSG +S+AK +
Sbjct: 65 YLRGQSHLDDHSIHLLFSANRWEVAQSIEADIANGTSVIIDRYSYSGAVYSAAKANPSLS 124
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RD 217
+EW PE+GL PD L+L I PE+AA+RGG+GGERYE+ Q +V + + + R
Sbjct: 125 LEWAWQPEVGLPKPDLCLFLSISPEEAAKRGGFGGERYENEAMQTRVRELFNTIFDLQRA 184
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWSC 259
+ +IIDA +S+ +V + + +V +++ P L S
Sbjct: 185 TDIRIIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 226
>gi|40556108|ref|NP_955193.1| CNPV170 thymidylate kinase [Canarypox virus]
gi|40233933|gb|AAR83516.1| CNPV170 thymidylate kinase [Canarypox virus]
Length = 212
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 139/210 (66%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +VLEGLDR GKT QC +LL Y+ G+ E +FP+R T +G++I++YL + +++
Sbjct: 3 RGMFIVLEGLDRSGKTVQCEKLLQYMLEKGYKTESLKFPNRETEIGKVINSYLEKKININ 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
D IHLLFSANRWE +++ KL LIVDRY++SG AF++AK + +EWCK + GL
Sbjct: 63 DRAIHLLFSANRWELADLIKDKLSHNINLIVDRYAFSGAAFTAAKNNVSLEWCKLTDSGL 122
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV-AQCYQMLRDS---SWKIIDACQS 228
PD V++LDI ++++R +G ERYE FQ +V + Y +++ + +WK+IDA ++
Sbjct: 123 PLPDLVIFLDISASESSDRENFGMERYETASFQDEVRKRFYDLIKGTDSINWKVIDATKT 182
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
IED+ +++K +V D + K P LW+
Sbjct: 183 IEDIHEEIKLLVEDVID--KLNDPIGSLWT 210
>gi|426198013|gb|EKV47939.1| hypothetical protein AGABI2DRAFT_219178 [Agaricus bisporus var.
bisporus H97]
Length = 240
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 137/227 (60%), Gaps = 23/227 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SR +V+EGLDR GKT+Q + L S L+ L +L +FPDRTT +GQMI +YL +QS L
Sbjct: 10 SRAPFIVIEGLDRSGKTTQAALLHSKLQSLNIPTKLLKFPDRTTPIGQMIDSYLRSQSEL 69
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG-------IDIEWC 165
DDH IHLLFSANRWE S + L +GTT++ DRY++SG+AFS++K +EWC
Sbjct: 70 DDHVIHLLFSANRWELASTITDLLHSGTTILCDRYAFSGIAFSASKPSLIQQDLAALEWC 129
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---------- 215
+AP+I L APD ++LD P +A R GYG ERYE ++ Q +V + + L
Sbjct: 130 RAPDISLPAPDLTIFLDFSPAEAQRRSGYGEERYEKIDVQNRVREIFHRLGQEMVHNDND 189
Query: 216 ---RDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
RDSS W ++DA + E + +L +V T +G+ LW
Sbjct: 190 NHRRDSSQEWVVVDASKDREVIADELWRLVEPLATKGVEGE-IKQLW 235
>gi|154308900|ref|XP_001553785.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10]
Length = 242
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 139/216 (64%), Gaps = 17/216 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRG+ +++EGLDR GKT+Q +L L G +V+L RFPDRTT++GQ I++YL + + L
Sbjct: 19 SRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDRTTAIGQQINSYLQSSTAL 78
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GID------IEWC 165
D +IHLLFSANRWEK + + G T++ DRY YSG+ ++S+K ID +EWC
Sbjct: 79 PDQSIHLLFSANRWEKAQEIRDLIAQGYTIVCDRYYYSGMIYTSSKYSIDSPNHLSLEWC 138
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS------ 219
K PEIGL PD V++LD+ PE+A +RGGYG E+YE E QR+V + L++S+
Sbjct: 139 KNPEIGLPMPDRVIFLDLEPEEAEKRGGYGDEKYETREMQRRVRNGFLSLQNSAVPGFEQ 198
Query: 220 ----WKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
K IDA +++V +++ V D V +KG+
Sbjct: 199 EQRIMKAIDAGDGLDEVAEKIWHAVKDIVEQIEKGE 234
>gi|194880945|ref|XP_001974613.1| GG20995 [Drosophila erecta]
gi|190657800|gb|EDV55013.1| GG20995 [Drosophila erecta]
Length = 211
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N RGAL++ EG DR GK++Q L++ L G FP+R++ +GQ+I++YL+N
Sbjct: 2 NAGKRGALIIFEGCDRSGKSTQSQLLVALLNSKGIPALPMNFPERSSIIGQVINSYLTNS 61
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L D IHL+FS NRWE + ++ L G T++VDRYS+SGVA+S+AKG+D +WC APE
Sbjct: 62 KDLPDEVIHLMFSTNRWEHMNYIKQNLHEGRTVVVDRYSFSGVAYSAAKGLDFDWCYAPE 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDAC 226
GL+ PD+V YL PP R YG ERYE +EFQ +VA+ + + + S W DA
Sbjct: 122 RGLIKPDAVFYLRAPPADLTNRTQYGEERYEKVEFQGRVAKVFDRICSEQGSYWHQFDAT 181
Query: 227 QSIEDVEKQLKEIV 240
+ +ED+ Q+ I
Sbjct: 182 KPVEDLHAQIASIT 195
>gi|410920722|ref|XP_003973832.1| PREDICTED: thymidylate kinase-like isoform 2 [Takifugu rubripes]
Length = 188
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 129/207 (62%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D+ GKT+QC +L+ L GH E+ RFPDRTT++G+MISAYL NQS L
Sbjct: 5 RGALIVLEGVDKAGKTTQCQKLVQALRRKGHPAEMMRFPDRTTTIGKMISAYLENQSELS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D T+HLLFSANRWE +++ KL+ GTTL+VDRY++SGVAF+SAK +
Sbjct: 65 DQTVHLLFSANRWELVPLIKKKLEQGTTLVVDRYAFSGVAFTSAKPLS------------ 112
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS---SWKIIDACQSIE 230
P +AA RG +G ERYE FQ V Q ++ L + +WK+IDA ++E
Sbjct: 113 -----------PAEAALRGHFGMERYEKSSFQCAVQQQFKHLMEDETVNWKVIDASMNVE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
DV K + E L+ + + P LW
Sbjct: 162 DVHKDITEHSLNAINIA-QNLPLGELW 187
>gi|393240722|gb|EJD48247.1| thymidylate kinase [Auricularia delicata TFB-10046 SS5]
Length = 246
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 132/235 (56%), Gaps = 30/235 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLG-HSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RGA +V+EG+DR GKT+Q + L L VEL +FPDRTT++G+MI AYL + + L
Sbjct: 12 RGAFIVIEGMDRAGKTTQAALLCDRLASASPRPVELIKFPDRTTAIGKMIDAYLRSATEL 71
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DD IHLLFSANRWE + +EA L GTTL+ DRY++SG+AFS+AK +WC P+
Sbjct: 72 DDRAIHLLFSANRWECAARIEAALAQGTTLVCDRYAFSGIAFSAAKPALADQFDWCATPD 131
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-------------- 215
GL APD ++LD+ P+ AA RGGYG ERYE + QR V + +
Sbjct: 132 TGLPAPDVAVFLDVSPQTAAARGGYGLERYEREDVQRAVRAVFARIGAPANSSSAPSSLS 191
Query: 216 ------------RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
R +W+++DA +S+E V + + V P LW+
Sbjct: 192 ADNTRAPGPMLGRARNWRVVDAGESVERVAASVWDAVEGAALTDGTEAPLGRLWA 246
>gi|193631931|ref|XP_001951558.1| PREDICTED: thymidylate kinase-like isoform 3 [Acyrthosiphon pisum]
gi|193631933|ref|XP_001951544.1| PREDICTED: thymidylate kinase-like isoform 2 [Acyrthosiphon pisum]
gi|193631935|ref|XP_001951524.1| PREDICTED: thymidylate kinase-like isoform 1 [Acyrthosiphon pisum]
gi|328724839|ref|XP_003248266.1| PREDICTED: thymidylate kinase-like [Acyrthosiphon pisum]
Length = 212
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GKT+QC++L+ L + + FPDR+T +G +I+ YLS + L
Sbjct: 7 RGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYLSRKIELP 66
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG-IDIEWCKAPEIGL 172
D ++HLLFSANRWE + ++++G TLIVDRYSYSGV F+SAK +D +WC PE GL
Sbjct: 67 DRSVHLLFSANRWELEPEIRKQIESGVTLIVDRYSYSGVVFTSAKQCVDFKWCCGPENGL 126
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD V++L + + A+R G+G ERYE++EFQ KV Y ++ ++ +DA Q + +
Sbjct: 127 PKPDIVMFLKLSIGEMAKRSGFGDERYENIEFQNKVDINYDKFKNDNFIQVDAAQDVSIL 186
Query: 233 EKQLKEIVLDQVTACK 248
L E VL + K
Sbjct: 187 TNTLLEQVLKTIDTVK 202
>gi|409075363|gb|EKM75744.1| hypothetical protein AGABI1DRAFT_79501 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 240
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 22/205 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
R +V+EGLDR GKT+Q S L S L+ L +L +FPDRTT +GQMI +YL +QS LD
Sbjct: 11 RAPFIVIEGLDRSGKTTQASLLHSKLQSLNIPTKLLKFPDRTTPIGQMIDSYLRSQSELD 70
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG-------IDIEWCK 166
DH IHLLFSANRWE S + L +GTT++ DRY++SG+AFS++K +EWC+
Sbjct: 71 DHVIHLLFSANRWELASTITDLLHSGTTILCDRYAFSGIAFSASKPSLIQQDLAALEWCR 130
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----------- 215
AP+I L APD ++LD P +A R GYG ERYE ++ Q +V + + L
Sbjct: 131 APDISLPAPDLTIFLDFSPAEAQRRSGYGEERYEKIDVQSRVREIFHRLGQEMVHNDNDN 190
Query: 216 --RDSS--WKIIDACQSIEDVEKQL 236
RDSS W ++DA + E + +L
Sbjct: 191 HRRDSSQEWVVVDASKDREVIADEL 215
>gi|325187412|emb|CCA21950.1| thymidylate kinase putative [Albugo laibachii Nc14]
Length = 228
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 127/196 (64%), Gaps = 10/196 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-SNQSHL 112
RG +++EGLD CGKT+Q L L + + EL RFPDRTT G++I AYL S +
Sbjct: 5 RGVFILIEGLDCCGKTTQTKLLHEALTKMSSAAELLRFPDRTTPTGKLIDAYLTSKDEQV 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIG 171
+D IHLLF+ANRWE +EA L +G +++DRY+YSG FS++K G+D+ WC PEIG
Sbjct: 65 NDRAIHLLFTANRWEAAEKIEAILNSGKNIVMDRYAYSGAVFSASKSGMDMNWCWQPEIG 124
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--------RDSSWKII 223
L PD+V++LD+P + A++R YG ERYE++EFQ KV + L +S W I
Sbjct: 125 LPRPDAVIFLDLPVDSASKREDYGAERYENVEFQEKVRLNFHKLIELDHSQKDESRWHFI 184
Query: 224 DACQSIEDVEKQLKEI 239
DA +IE V+ ++ E+
Sbjct: 185 DANDTIEKVQARVFEV 200
>gi|157116912|ref|XP_001652905.1| Thymidylate kinase, putative [Aedes aegypti]
gi|108883433|gb|EAT47658.1| AAEL001246-PB [Aedes aegypti]
Length = 181
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 83 GHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTL 142
GH + FPDR+T G +I++YL+++ + D IHLLF+ NRWE ++ ME L++G TL
Sbjct: 7 GHKAKFMNFPDRSTQFGALINSYLTSKDNFTDEAIHLLFTLNRWEAKNEMERLLRSGVTL 66
Query: 143 IVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHL 202
IVDRYSYSGVAFS+AKG++++WCKAPE GL PD VL L + E A+RGG+G ERYE
Sbjct: 67 IVDRYSYSGVAFSAAKGLNMDWCKAPETGLPKPDLVLLLTLTAEAMAKRGGFGQERYEVP 126
Query: 203 EFQRKVAQCYQMLRDSS-WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E Q+KV + + L+D S WK++DA + + + +L E+VLD + +C KP LW
Sbjct: 127 ELQKKVMEKFHTLKDDSYWKVVDADKKEDALSLELCEMVLDSMESC-SDKPLGKLW 181
>gi|156044845|ref|XP_001588978.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980]
gi|154694006|gb|EDN93744.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 242
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 138/216 (63%), Gaps = 17/216 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRG+ +++EGLDR GKT+Q +L L G +V+L RFPDRTTS+GQ I++YL + + L
Sbjct: 19 SRGSFILIEGLDRAGKTTQVRKLCDRLYASGRNVKLMRFPDRTTSIGQQINSYLQSSTIL 78
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-------GIDIEWC 165
D IHLLFSANRWEK + + G T++ DRY YSG+ ++S+K + +EWC
Sbjct: 79 PDQAIHLLFSANRWEKAQEIHQFIAQGYTIVCDRYYYSGMIYTSSKYPTDSPNHLSLEWC 138
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS------ 219
K PEIGL PD V++LD+ PE+A +RGGYG E+YE E QR+V + L++++
Sbjct: 139 KNPEIGLPMPDKVIFLDLEPEEAEKRGGYGDEKYETREMQRRVRDGFLRLQNTAIKGFEH 198
Query: 220 ----WKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
K I+A +++V +++ + V+ V +KG+
Sbjct: 199 ERSIMKAINAGSGVDEVAEKIWDTVVTLVEQIEKGE 234
>gi|171676382|ref|XP_001903144.1| hypothetical protein [Podospora anserina S mat+]
gi|170936257|emb|CAP60916.1| unnamed protein product [Podospora anserina S mat+]
Length = 274
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 126/179 (70%), Gaps = 5/179 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+VLEGLDR GKT+Q L LG SV++ RFPDRTT +GQMI++YL++Q+ +
Sbjct: 12 TRGALIVLEGLDRSGKTTQVKLLEQRFVELGKSVKVMRFPDRTTPIGQMINSYLTSQTTM 71
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPE 169
DH IHLLFSANRWE S++ + L GTT+I DRY YSG+ +S+AK + + W ++PE
Sbjct: 72 SDHVIHLLFSANRWEAASLITSLLSHGTTVICDRYYYSGIVYSAAKHNPFLPLSWARSPE 131
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GL PD VL+LD+ ++A +RGG+GGE YE E QR+V + + L S KI+ A S
Sbjct: 132 VGLPRPDLVLFLDLDEQEAKKRGGWGGEVYEKAEMQRRVRELFWGL--SLGKIVGAPHS 188
>gi|1836042|gb|AAB46838.1| thymidylate kinase [Mus sp.]
Length = 227
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++++YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++AKL G TL++DRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQ 227
PD +L+L + AA RG +G ERYE FQ++V C+Q L ++ +WK++DA +
Sbjct: 125 PKPDLILFLQLQLLDAAARGEFGLERYETGTFQKQVLLCFQQLMEEKNLNWKVVDASK 182
>gi|326469002|gb|EGD93011.1| thymidylate kinase [Trichophyton tonsurans CBS 112818]
Length = 182
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVV+EGLDR GK++QC+RL +L GH + RFPDRTT++G+MI+ YL + LD
Sbjct: 12 RGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYLRGEIQLD 71
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA---KGIDIEWCKAPEI 170
DH +HLLFSANRWE + + +++G T+IVDRYSYSG +S+A K + ++W PE+
Sbjct: 72 DHAVHLLFSANRWEAAAQIRRDIESGITVIVDRYSYSGAVYSAAKENKELQLDWAWRPEV 131
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
GL PD +L+I E AA RGGYG ERYE + Q+KV + +
Sbjct: 132 GLPRPDIWFFLNISTEVAAARGGYGTERYETVNLQKKVGKLF 173
>gi|443897869|dbj|GAC75208.1| thymidylate kinase/adenylate kinase [Pseudozyma antarctica T-34]
Length = 1085
Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 130/193 (67%), Gaps = 11/193 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V+EGLDR GK++Q RL +L + + +FP+RTT++GQMI++YL+ S LD
Sbjct: 408 RGFFIVVEGLDRAGKSTQVERLAQHL-----NAKPIKFPERTTAIGQMINSYLAQTSDLD 462
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE + + L AG +++ DRY++SG+A+S +KG+ +WC+ P+IGL
Sbjct: 463 DQAIHLLFSANRWECVAAIHKTLDAGESIVCDRYAFSGIAYSVSKGLSYDWCRHPDIGLP 522
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRD-----SSWKIIDACQ 227
PD L+LD+ + AA RGGYG ERYE LEFQ KV + + Q+ +D W IDA +
Sbjct: 523 LPDLTLFLDLDAQTAAARGGYGEERYEKLEFQAKVREAFGQVAQDVKAHGGRWVTIDAGK 582
Query: 228 SIEDVEKQLKEIV 240
+++ V +++ V
Sbjct: 583 TLDQVTDDIQKAV 595
>gi|367036341|ref|XP_003648551.1| hypothetical protein THITE_2106135 [Thielavia terrestris NRRL 8126]
gi|346995812|gb|AEO62215.1| hypothetical protein THITE_2106135 [Thielavia terrestris NRRL 8126]
Length = 303
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 138/244 (56%), Gaps = 45/244 (18%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGALVVLEGLDR GKT+Q L LG V++ RFPDRTT +GQMI +YL +Q +
Sbjct: 51 ARGALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLRSQVDM 110
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWE + + L AG T+I DRY +SG+ +S+AK + + W +APE
Sbjct: 111 DDHVIHLLFSANRWEAAKTIASLLTAGVTVICDRYYHSGIVYSAAKQNPSLTLSWARAPE 170
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY----------------- 212
+GL PD VL+LD+ +A RGG+GGE YE E QR+V + +
Sbjct: 171 VGLPRPDLVLFLDLDENQARARGGWGGEAYEKAEMQRRVRELFWGLSLGKIETASVVAEQ 230
Query: 213 ----------------QMLRDSSWK---------IIDACQSIEDVEKQLKEIVLDQVTAC 247
Q L + ++ +IDA S+E+V +++ +V +V A
Sbjct: 231 GAVGPKEEVAVGPPTAQRLTGTEYRFRQEEEDLHVIDASPSVEEVAEEVWRVVKSRVEAV 290
Query: 248 KKGK 251
+KG+
Sbjct: 291 EKGE 294
>gi|389629288|ref|XP_003712297.1| thymidylate kinase [Magnaporthe oryzae 70-15]
gi|351644629|gb|EHA52490.1| thymidylate kinase [Magnaporthe oryzae 70-15]
gi|440470173|gb|ELQ39259.1| thymidylate kinase [Magnaporthe oryzae Y34]
gi|440485569|gb|ELQ65514.1| thymidylate kinase [Magnaporthe oryzae P131]
Length = 240
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 133/220 (60%), Gaps = 22/220 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEGLDR GKT+Q L LG +V++ RFPDRTT +GQMI YL +Q +D
Sbjct: 12 RGALIVLEGLDRSGKTTQVQLLEKRFLDLGRNVKVMRFPDRTTPIGQMIDGYLKSQVDMD 71
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE + L AGTT++ DRY YSG+ +S+AK + + W +APE+
Sbjct: 72 DHVIHLLFSANRWEAAKQITDLLSAGTTVLCDRYYYSGMVYSAAKQNPALPLSWARAPEV 131
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--------------- 215
GL PD VL+LD+ E+A RGG+G E YE E QR+V + + L
Sbjct: 132 GLPRPDLVLFLDLTEEQAKARGGWGDELYERAEMQRRVRELFWGLSMGRIEAGGGSQREE 191
Query: 216 ----RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
+ ++DA S+E V +++ ++V +V A +G+
Sbjct: 192 RARQEEEDLHVVDASPSVEAVCEEIWKVVEPRVDAVGRGE 231
>gi|167516318|ref|XP_001742500.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779124|gb|EDQ92738.1| predicted protein [Monosiga brevicollis MX1]
Length = 171
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 114/159 (71%), Gaps = 1/159 (0%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEG-LGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+VLEG DRCGK++QC RL+ +L+ + E RFPDRTT +G +I+ YL +
Sbjct: 2 NRGLLIVLEGCDRCGKSTQCGRLVEWLKNHRPNGAESMRFPDRTTQIGSLINQYLRKEIE 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
L D HLLFSANRWE R +E KL G +L+VDRY++SGVAF+SAKG+D+EWCK P+ G
Sbjct: 62 LPDKAAHLLFSANRWELRDEIERKLANGVSLVVDRYAFSGVAFTSAKGLDVEWCKQPDAG 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQ 210
L PD ++++++ +A RGG+G ERYE EFQ KV +
Sbjct: 122 LPVPDVLIHMELSQSEAESRGGFGEERYEVSEFQAKVKE 160
>gi|353240335|emb|CCA72209.1| related to thymidylate kinase [Piriformospora indica DSM 11827]
Length = 229
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 133/210 (63%), Gaps = 23/210 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VV+EGLDR GK++Q RL +L+ L +FPDRTT++G+MI YL ++S LD
Sbjct: 4 RGVFVVIEGLDRSGKSTQSQRLFEHLQEKTGKARLLKFPDRTTAIGKMIDGYLRSESDLD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------GIDI--- 162
D IHLLF+ANRWE + +E L AGT+++ DRY++SG+AFS+AK G ++
Sbjct: 64 DRAIHLLFAANRWECAASIERDLLAGTSIVCDRYAFSGIAFSAAKVAVSKSSEGNEVRES 123
Query: 163 ----EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
EWCK+P+ GL APD V++LD+ PE A RGGYG ERYE E Q +V + ++ +
Sbjct: 124 ILTYEWCKSPDTGLPAPDMVIFLDVTPEVARSRGGYGEERYEKEETQLRVKEQFRKIEQD 183
Query: 219 --------SWKIIDACQSIEDVEKQLKEIV 240
W +DA +S++++ + ++ +V
Sbjct: 184 VVKNFTGIEWWNLDASKSLDEISESIRNLV 213
>gi|430812257|emb|CCJ30319.1| unnamed protein product [Pneumocystis jirovecii]
Length = 215
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 124/192 (64%), Gaps = 6/192 (3%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
I +RGAL+V+EG D GKT+QC L + V++ +FPDR+T +G++I++YLS
Sbjct: 5 ILNRGALIVIEGPDNAGKTTQCELLANEFLIKNLPVKIQKFPDRSTEIGKIINSYLSGDL 64
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
L+DH IHLLFSANRWE + L+ GT +I DRY YSG+AFS AKG+DIEWCKAPE
Sbjct: 65 ELEDHAIHLLFSANRWEISEKVRKNLEEGTFVIADRYIYSGIAFSVAKGLDIEWCKAPER 124
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS------WKIID 224
GL PD V+YLD+ EK ++R YG ERYE Q V ++ + +++ W I+
Sbjct: 125 GLPLPDCVIYLDVDQEKTSQRQNYGTERYETNVMQENVRSIFKDISEANNNVCCPWYWIN 184
Query: 225 ACQSIEDVEKQL 236
A SI V+ ++
Sbjct: 185 ASNSILQVKTEI 196
>gi|15078963|ref|NP_149714.1| 251L [Invertebrate iridescent virus 6]
gi|82012170|sp|Q91FS1.1|KTHY_IIV6 RecName: Full=Putative thymidylate kinase 251L; AltName: Full=dTMP
kinase
gi|15042332|gb|AAK82112.1|AF303741_251 251L [Invertebrate iridescent virus 6]
Length = 213
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+++RG L+V EG D+ GK++QC L L+ V + FP+RTT G++I YL +
Sbjct: 10 LETRGLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLKGKI 69
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+L D IH+LFS NRWE ++ + G T+I+DRYSYSG+AFS AKG+D +WCK E
Sbjct: 70 YLSDEDIHILFSKNRWEIIDTIKTNILNGITVIIDRYSYSGIAFSVAKGLDFQWCKQTEN 129
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ-MLRDSSWKIIDACQSI 229
GLL PD ++YL + A R GYG E YE +E Q KV +CY+ M+ W I+A Q +
Sbjct: 130 GLLKPDIIIYLTGQTKNMASRNGYGSEIYERIEIQDKVKKCYEKMIEIPLWNKINADQDV 189
Query: 230 EDVEKQLKEIV 240
++KQ++ I+
Sbjct: 190 LIIKKQIETII 200
>gi|299745593|ref|XP_001831821.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
gi|298406658|gb|EAU90004.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
Length = 237
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 123/201 (61%), Gaps = 35/201 (17%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEG-LGHSVELWRFPDRTTSVGQMISAYLSN 108
N R +V+EGLDR GKT+Q + L S LE LG S +L +FPDRTT++GQMI +YL +
Sbjct: 4 NGSKRAPFIVIEGLDRSGKTTQTALLQSRLESELGASTKLMKFPDRTTTIGQMIDSYLKS 63
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID------- 161
S LDDH IHLLFSANRWE S +E L GT ++ DRY++SG+AFS++K +
Sbjct: 64 DSELDDHVIHLLFSANRWELASTIERLLNEGTVVLCDRYAFSGIAFSASKVVPERSGSGE 123
Query: 162 ------IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
EWC+AP+IGL APD VL+LDI PE+A +RGGYG ER
Sbjct: 124 SVPKLPFEWCRAPDIGLPAPDLVLFLDIAPEQAKQRGGYGEER----------------- 166
Query: 216 RDSSWKIIDACQSIEDVEKQL 236
W++IDA + +E V L
Sbjct: 167 ----WRVIDAGRDVESVAADL 183
>gi|224059750|ref|XP_002191830.1| PREDICTED: thymidylate kinase [Taeniopygia guttata]
Length = 215
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 121/172 (70%), Gaps = 6/172 (3%)
Query: 91 FP-DRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSY 149
FP DR+T +GQ+IS+YL + +L+DHTIHLLFSANRWE MM+ KL G T++VDRY++
Sbjct: 44 FPADRSTEIGQLISSYLGREKNLEDHTIHLLFSANRWEHVPMMKEKLHQGITVVVDRYAF 103
Query: 150 SGVAFSSAKG-IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV 208
SGVAF+SAKG +EWCK P++GL PD +L+L + PE AAERG +G ERYE FQ KV
Sbjct: 104 SGVAFTSAKGNFGLEWCKQPDVGLPKPDLILFLQLNPEAAAERGDFGHERYETSSFQEKV 163
Query: 209 AQC-YQMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
Q Y ++ D S WK +DA +SIED+ +++K I + + + KP LW
Sbjct: 164 LQSFYCLMEDKSLNWKTVDASKSIEDLHREIKSIAKETMEEV-QNKPLGELW 214
>gi|301118893|ref|XP_002907174.1| thymidylate kinase [Phytophthora infestans T30-4]
gi|262105686|gb|EEY63738.1| thymidylate kinase [Phytophthora infestans T30-4]
Length = 216
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHS--VELWRFPDRTTSVGQMISAYLSNQSH 111
RG ++ EG+DRCGKT+Q L L S L FPDR+T++G+ I +YL++
Sbjct: 4 RGIFLLFEGVDRCGKTTQTKLLHDALNASSSSQPSALLHFPDRSTAIGKSIHSYLTSSEA 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEI 170
+DDH IHLLFSANRWE S +E+ L +G +I+DRYS+SGVAFS+AK G+ ++WC APEI
Sbjct: 64 MDDHVIHLLFSANRWEAASKIESILASGQHIIMDRYSFSGVAFSAAKSGMSLDWCWAPEI 123
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDACQ 227
GL PD++++LD+P +A+ R +G ERYE FQ KV + + + + + W ++DA
Sbjct: 124 GLPKPDAIIFLDVPVTQASTRADFGQERYETTAFQEKVYRNFYDIMERATPKWHVVDATG 183
Query: 228 SIEDVEKQLKEIVLDQV 244
+IE V++++ I + +
Sbjct: 184 TIEQVQEKVMAIAKETI 200
>gi|195121060|ref|XP_002005039.1| GI19275 [Drosophila mojavensis]
gi|193910107|gb|EDW08974.1| GI19275 [Drosophila mojavensis]
Length = 211
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 125/192 (65%), Gaps = 3/192 (1%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ RGA +V EG DR GK++Q ++L L+ G + + FP+R+T +G +I+ +L N
Sbjct: 4 NKRGAFIVFEGCDRVGKSTQSNQLCERLKEKGIAAKKINFPNRSTIIGDVINRFLKNTQE 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
L IHLLFSANRWE S ++A L AGTT+I DRY+YSGV +S AKG+D++WC AP++G
Sbjct: 64 LSHEVIHLLFSANRWECMSSIQADLLAGTTIICDRYAYSGVVYSVAKGLDLDWCWAPDLG 123
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD---SSWKIIDACQS 228
LL PD+V YL P++ A RG +G ERYE LE QRKV+ + + S W DA ++
Sbjct: 124 LLKPDAVFYLKANPDQLASRGSFGNERYEKLELQRKVSDLFDHFNEKESSYWHQFDAFET 183
Query: 229 IEDVEKQLKEIV 240
+++ ++ I
Sbjct: 184 EQELHSKISTIA 195
>gi|319411558|emb|CBQ73602.1| related to thymidylate kinase [Sporisorium reilianum SRZ2]
Length = 1229
Score = 181 bits (459), Expect = 3e-43, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 126/193 (65%), Gaps = 11/193 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V+EGLDR GK++Q RL +L + +FP+RTT++GQMI++YL+ S LD
Sbjct: 430 RGFFIVVEGLDRAGKSTQVERLAQHLHA-----KAIKFPERTTAIGQMINSYLAQTSDLD 484
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE + ++ L AG +++ DRY++SG+A+S AKG+ +WC+ P++GL
Sbjct: 485 DQAIHLLFSANRWECVASIKKTLDAGESIVCDRYAFSGIAYSVAKGLSYDWCRNPDVGLP 544
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS------SWKIIDACQ 227
PD ++LD+ E AA RGGYG ERYE L+FQ KV + + W IDA +
Sbjct: 545 LPDLTMFLDLDAETAAARGGYGEERYEKLDFQAKVRDAFTRVSQDVRAHGGRWVTIDASK 604
Query: 228 SIEDVEKQLKEIV 240
+++ V +++ V
Sbjct: 605 TLDQVTDDIQKAV 617
>gi|388854519|emb|CCF51906.1| related to thymidylate kinase [Ustilago hordei]
Length = 1228
Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats.
Identities = 95/228 (41%), Positives = 147/228 (64%), Gaps = 22/228 (9%)
Query: 42 SSSSLRIGNIDS----RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTS 97
++S+ I DS RG +V+EGLDR GK++Q RL +L+ + +FP+RTT+
Sbjct: 394 AASAANINKDDSQPRKRGFFIVVEGLDRAGKSTQVDRLAEHLQA-----KAIKFPERTTA 448
Query: 98 VGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA 157
+GQMI++YL+ S LDD IHLLFSANRWE + ++ L+AG +++ DRY++SG+A+S A
Sbjct: 449 IGQMINSYLAQTSDLDDQAIHLLFSANRWECVASIKNTLEAGESIVCDRYAFSGIAYSVA 508
Query: 158 KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
KG+ +W + P++GL PD ++LD+ + AA RGGYG ERYE LEFQ KV + + +
Sbjct: 509 KGLSYDWSRNPDVGLPLPDLTMFLDLDAQTAAARGGYGEERYEKLEFQAKVREAFTRVSQ 568
Query: 218 ------SSWKIIDACQSI----EDVEKQLKEIV--LDQVTACKKGKPF 253
+ W IDA +++ +D++K ++ + +D+V A K GK F
Sbjct: 569 DVKSHGARWVTIDASKTLDQVTDDIQKAVQRVTSSIDRVGA-KLGKLF 615
>gi|378727720|gb|EHY54179.1| thymidylate kinase [Exophiala dermatitidis NIH/UT8656]
Length = 226
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 122/196 (62%), Gaps = 7/196 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG LVV+EGLDR GK+SQC +L L+ G +FPDRTT GQMI++YL+ Q D
Sbjct: 10 RGLLVVIEGLDRSGKSSQCQQLFDSLQSQGKRARYVKFPDRTTPTGQMINSYLTGQVQQD 69
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH+IHLLFSANRWE + L AG T+IVDRYS+SG +S+AK + ++W PEI
Sbjct: 70 DHSIHLLFSANRWEAIRSIHNDLLAGVTVIVDRYSFSGAVYSAAKENPDLTLDWAWNPEI 129
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ----MLRDSSWKIIDAC 226
GLL PD + +LDI AA+R GYG ERYE + Q +V +Q L + +II+A
Sbjct: 130 GLLKPDVLFFLDISAADAAKRRGYGAERYETEKMQARVRTLFQELFARLENVPVRIINAG 189
Query: 227 QSIEDVEKQLKEIVLD 242
Q ++ V + + D
Sbjct: 190 QPLKAVADDIAAGIAD 205
>gi|340923546|gb|EGS18449.1| thymidylate kinase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 296
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 113/163 (69%), Gaps = 3/163 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+VLEGLDR GKT+Q L LG V++ RFPDRTT +GQ+I +YL +Q +
Sbjct: 41 TRGALIVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQIIDSYLKSQVDI 100
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWE + A L AG T++ DRY YSG+ +S+AK + + W +APE
Sbjct: 101 DDHVIHLLFSANRWEAAKTITALLNAGITVLCDRYYYSGIVYSAAKQNPTLSLAWARAPE 160
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
+GL PD VL+LD+ E+A RGG+GGE YE E Q++V + +
Sbjct: 161 VGLPRPDLVLFLDLDEEQARARGGWGGEAYEKAEMQKRVRELF 203
>gi|71018245|ref|XP_759353.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
gi|46099078|gb|EAK84311.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
Length = 1208
Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 138/214 (64%), Gaps = 18/214 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V+EGLDR GK++Q RL ++L+ + +FP+RTT++GQMI++YL+ S LD
Sbjct: 425 RGFFIVVEGLDRAGKSTQVERLAAHLQA-----KAVKFPERTTAIGQMINSYLAQTSDLD 479
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHLLFSANRWE + + L+AG +++ DRY++SG+A+S AKG+ +WC+ P++GL
Sbjct: 480 DQAIHLLFSANRWECVASLHRTLEAGESIVCDRYAFSGIAYSVAKGLSYDWCRNPDVGLP 539
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS------SWKIIDACQ 227
PD L+LD+ AA RGGYG ERYE L+FQ KV + + + W IDA +
Sbjct: 540 LPDLTLFLDLDANAAAARGGYGEERYEKLDFQAKVREAFTRVSQDVRTHGGRWVTIDASK 599
Query: 228 SIEDVEKQLKEIV------LDQVTACKKGKPFSL 255
+++ V +++ V +D+V A K GK F +
Sbjct: 600 TLDQVTDDMQKAVHRVTSSIDRVGA-KLGKLFVM 632
>gi|397570925|gb|EJK47533.1| hypothetical protein THAOC_33735, partial [Thalassiosira oceanica]
Length = 335
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 139/247 (56%), Gaps = 42/247 (17%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT----------------- 96
RGA ++LEG+DRCGKT+Q S L+ +L L + +RFPDRTT
Sbjct: 66 RGAFILLEGVDRCGKTTQVSLLVKHLLSLSLAATAFRFPDRTTQGRFMYGMGRLSCACSS 125
Query: 97 -------SVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSY 149
+VG +I+ YL + DD IHLLFSANRWE + L GT +I DRY+Y
Sbjct: 126 NNGNLVLAVGGLINQYLQSSVQTDDRAIHLLFSANRWEAAPKLVDTLARGTNIICDRYAY 185
Query: 150 SGVAFSSAKG-----------IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER 198
SGVAF+SAK + ++WC ++GL APD+V++LD+ ++A +RGGYGGER
Sbjct: 186 SGVAFTSAKTAEDRSSMSGGELTLDWCMGGDVGLPAPDAVIFLDLSQDEAEKRGGYGGER 245
Query: 199 YEHLEFQRKVAQCYQMLR-------DSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
YE + Q++V + ++ L+ W ++DA QSIE V + L IV V +G
Sbjct: 246 YEKRDLQKRVRERFRELQAIDEKHGRVPWHVVDAAQSIEQVTEDLVSIVTKTVKKVDEGA 305
Query: 252 PFSLLWS 258
P + ++S
Sbjct: 306 PLNRMFS 312
>gi|346471783|gb|AEO35736.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 124/210 (59%), Gaps = 7/210 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V EG DR GK++Q L L G GH + FP RTT+ G+++ YL ++LD
Sbjct: 6 RGLFIVFEGCDRTGKSTQVKLLAEVLAGKGHKTDTIAFPKRTTATGKLLDGYLKESTNLD 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH +HLLFSANRW++ + + TT+I DRY+YSGVAFS+AK +D WC+ P+ GL
Sbjct: 66 DHAVHLLFSANRWQEAQAIRQTVARHTTVICDRYAYSGVAFSAAKSLDFTWCQQPDKGLP 125
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR-----DSSWKIIDACQS 228
PD V Y+ PE R G+G ERYE +EFQ KV Y+ W ID+ +S
Sbjct: 126 EPDLVFYMSASPEVLNARDGFGTERYEKVEFQTKVRANYERFAALESGSGRWVNIDSARS 185
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
IE+V + + VLD V + +G+ LWS
Sbjct: 186 IEEVHRDILSCVLD-VLSRDRGE-LGKLWS 213
>gi|427798599|gb|JAA64751.1| Putative thymidylate kinase/adenylate kinase, partial
[Rhipicephalus pulchellus]
Length = 184
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 114/180 (63%), Gaps = 5/180 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V EG DR GKT+Q L L GLGH E FP R+T+ G+++ AYL+ ++LD
Sbjct: 5 RGLFIVFEGCDRTGKTTQVKLLAEALAGLGHKTECIAFPKRSTATGKLLDAYLTKGANLD 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH +HLLFSANRW++ + + T+I DRY+YSGVAF++AK +D WC+ P+ GL
Sbjct: 65 DHAVHLLFSANRWQESESIRQAVAQQRTVICDRYAYSGVAFTAAKSLDFAWCQQPDRGLP 124
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR--DSS---WKIIDACQS 228
PD VLY+ +PP+ R G+G ERYE+ EFQ KV Y L DS W +DA QS
Sbjct: 125 EPDVVLYMSVPPDALDARDGFGNERYENAEFQAKVRANYDRLAALDSGSGRWVNVDATQS 184
>gi|50548641|ref|XP_501790.1| YALI0C13354p [Yarrowia lipolytica]
gi|49647657|emb|CAG82100.1| YALI0C13354p [Yarrowia lipolytica CLIB122]
Length = 204
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 126/188 (67%), Gaps = 1/188 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG + +EGLDR GK++QC RL+++L E G+ L++FPDR+T +GQ+I+ YL++ L
Sbjct: 2 RGRFIAIEGLDRSGKSTQCDRLVAHLTETTGNKTHLFKFPDRSTPMGQIINQYLTSGVAL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IHLLFSANRWE+ ++A L+ G +++DRY SG+ ++ AKG++ +WC P++GL
Sbjct: 62 SDQAIHLLFSANRWERIEDIKALLEKGENVVLDRYYISGIVYTQAKGLERQWCTNPDLGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD L+L + PE A++RG YG ERYE + FQ++VA + + + +DA + E+V
Sbjct: 122 PVPDITLFLTVSPEVASQRGAYGEERYEKIAFQKRVAALFHEVAQRNCITVDASGTEEEV 181
Query: 233 EKQLKEIV 240
+ + V
Sbjct: 182 ANAINQCV 189
>gi|85091013|ref|XP_958694.1| thymidylate kinase [Neurospora crassa OR74A]
gi|12718338|emb|CAC28573.1| related to thymidylate kinase [Neurospora crassa]
gi|28920075|gb|EAA29458.1| thymidylate kinase [Neurospora crassa OR74A]
Length = 309
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N +RGAL+V+EGLDR GKT+Q L G V+ RFPDRTT +GQMI +YL +Q
Sbjct: 19 NPIARGALIVIEGLDRSGKTTQVKLLEDRFLKAGKKVKTMRFPDRTTPIGQMIDSYLKSQ 78
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCK 166
+ +DDH IHLLFSANRWE + ++L GTTLI+DRY +SG+ +S+AK + + W +
Sbjct: 79 AQMDDHVIHLLFSANRWEAVKKITSELSQGTTLILDRYYHSGIVYSAAKQNPSLSLSWAR 138
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
APEIGL PD VL+LD+ E+A RGG+G E YE E QR+V + +
Sbjct: 139 APEIGLPRPDLVLFLDLDEEQARLRGGWGHELYEKAEMQRRVRELF 184
>gi|328853928|gb|EGG03063.1| hypothetical protein MELLADRAFT_44639 [Melampsora larici-populina
98AG31]
Length = 222
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 136/224 (60%), Gaps = 23/224 (10%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
D+RGA VV+EGLDRCGK++QC L L G SVEL RFPDR T +G+MI +YL+ +S
Sbjct: 4 DNRGAFVVIEGLDRCGKSTQCKILADRLTNAGRSVELMRFPDRETVIGKMIHSYLNQESD 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------GIDIE 163
LDDH IHLLF+ANRWEKR L++GTTLI DRY++SGVAF+SAK
Sbjct: 64 LDDHAIHLLFAANRWEKR-----HLQSGTTLICDRYAFSGVAFTSAKFQLRTPPQPESFT 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---- 219
+P+ GL PD V++L +P E RGG+G ERYE + Q +V + ++ + + +
Sbjct: 119 SLSSPDRGLPLPDLVIFLTMPMEATVTRGGFGQERYEKEDLQAEVKRQFEQVVEPAFTRL 178
Query: 220 -----WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
W I+A SI++V ++ + V D++ K LW+
Sbjct: 179 HGQGRWVEINASGSIDEVTCRISKTV-DRLLGSKLDPAVGKLWA 221
>gi|403366547|gb|EJY83076.1| Thymidylate kinase [Oxytricha trifallax]
Length = 245
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 12/201 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
RG +V EGLDR GK++Q SR+ Y E L E FP R T+ G+M++ YL N ++
Sbjct: 19 RGLFIVFEGLDRSGKSTQSSRVAKYFKEELQRKTETMSFPKRDTNGGKMLNDYLQNRENK 78
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
L+D +H LF+ NRWE + LK GT +I DRY++SGVA+S+AKG+D EWCK + G
Sbjct: 79 LNDKAVHTLFAFNRWEMVPDIIQMLKNGTNIICDRYAFSGVAYSAAKGLDFEWCKNSDRG 138
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY----QMLRDSS-WKIIDAC 226
L+ PD Y+D+ P+ A+RG YG ERYE L+FQ KV Y Q +DS W IDA
Sbjct: 139 LVTPDLTFYIDVAPDVLAQRGNYGDERYERLDFQTKVGHVYDRFKQDFKDSEHWATIDAS 198
Query: 227 -QSIEDVEKQLKEIVLDQVTA 246
QS+E++ Q ++D++ A
Sbjct: 199 NQSVEELTAQ----IIDKINA 215
>gi|302896090|ref|XP_003046925.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727853|gb|EEU41212.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 257
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 136/224 (60%), Gaps = 25/224 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +VLEGLDR GKT+Q L G+ V++ RFPDR+T +GQMI +YL + +
Sbjct: 33 ARGAFIVLEGLDRSGKTTQVKLLEQRFVEEGNKVKVMRFPDRSTPIGQMIDSYLKSDVEM 92
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWE +++ L AGTT++ DRY +SG+ +S+AK + + W +APE
Sbjct: 93 DDHVIHLLFSANRWEAVKQIQSLLAAGTTIVCDRYYHSGIVYSAAKQNPSLTLPWARAPE 152
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RD-------- 217
GL PD VL+LD+ E+A RGG+GGE YE E QR+V + + L RD
Sbjct: 153 RGLPRPDLVLFLDLTEEQARSRGGWGGEVYERSEMQRRVRELFWGLSMGGRDVTAQGLGL 212
Query: 218 ---SSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
WK ++DA S+E+V +++ V +V ++G+
Sbjct: 213 DEGEGWKQEEEDLVVVDAGGSVEEVAEEVWRKVKGRVEQVERGE 256
>gi|336473462|gb|EGO61622.1| hypothetical protein NEUTE1DRAFT_77740 [Neurospora tetrasperma FGSC
2508]
gi|350293248|gb|EGZ74333.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 309
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N +RGAL+V+EGLDR GKT+Q L G V+ RFPDRTT +GQMI +YL +Q
Sbjct: 19 NPIARGALIVVEGLDRSGKTTQVKLLEDRFLKAGKKVKTMRFPDRTTPIGQMIDSYLKSQ 78
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCK 166
+ +DDH IHLLFSANRWE + ++L GTTLI+DRY +SG+ +S+AK + + W +
Sbjct: 79 AQMDDHVIHLLFSANRWEAVKTITSELSQGTTLILDRYYHSGIVYSAAKQNPSLSLSWAR 138
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
APEIGL PD VL+LD+ E+A RGG+G E YE E QR+V + +
Sbjct: 139 APEIGLPRPDLVLFLDLDEEQARLRGGWGHELYEKAEMQRRVRELF 184
>gi|164658566|ref|XP_001730408.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
gi|159104304|gb|EDP43194.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
Length = 520
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 9/231 (3%)
Query: 30 LPKCSCTPFRMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
L + S TP + + + RG +V+EGLDR GK++Q RL+ + LG L
Sbjct: 286 LEQTSSTPALLGNRMLISNPTNGERGVFIVVEGLDRSGKSTQVDRLV---QTLGPRARLV 342
Query: 90 RFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSY 149
+FP+RTT +G MI +YL NQ+ D T+HLLFSANRWE S + L+ G +I DRY +
Sbjct: 343 KFPERTTPIGSMIHSYLKNQTDACDQTVHLLFSANRWELLSSIVQSLRDGQHVICDRYIF 402
Query: 150 SGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVA 209
SG+A++ AKG+D+ WC AP++GL PD L+LD+ A +R YG ERYE FQR V
Sbjct: 403 SGMAYTHAKGLDLAWCTAPDVGLPVPDLTLFLDLDESTATKRAAYGEERYERRAFQRLVR 462
Query: 210 QCYQ-----MLRDSS-WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFS 254
++ MLR + W+ +DA +++DV + + V + V+A + FS
Sbjct: 463 HAFENVEQLMLRSGARWERLDASGTLDDVWQAVHAQVQEVVSAPRSASLFS 513
>gi|432853379|ref|XP_004067678.1| PREDICTED: thymidylate kinase-like isoform 2 [Oryzias latipes]
Length = 151
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+QC L+ L+ G E RFPDRTT++GQ+ISAYL +S L+
Sbjct: 5 RGALIVLEGVDRAGKTTQCKMLVQALQKSGRPAEAMRFPDRTTTIGQLISAYLEKKSELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DHT+HLLFSANRWE M+ KL+ G TL+VDRY++SG AF+SAK G +EWC P++GL
Sbjct: 65 DHTVHLLFSANRWELVPTMKKKLEQGITLVVDRYAFSGAAFTSAKPGFSLEWCMKPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERG 192
PD V++L + P +AA RG
Sbjct: 125 PKPDLVMFLQLSPAEAALRG 144
>gi|346980090|gb|EGY23542.1| thymidylate kinase [Verticillium dahliae VdLs.17]
Length = 285
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 143/257 (55%), Gaps = 39/257 (15%)
Query: 32 KCSCTPFRMESSSSLRIGNID----------SRGALVVLEGLDRCGKTSQCSRLLSYLEG 81
K + +P + +++L IG D +RGALV+LEGLDR GKT+Q L
Sbjct: 22 KAAVSPEK--EATALSIGMDDEQLVAPESAITRGALVILEGLDRSGKTTQVKLLEQRFVE 79
Query: 82 LGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTT 141
LG V++ RFPDR+T +GQMI AYL + +DDH IHLLFSANRWE + L +GTT
Sbjct: 80 LGKKVKVMRFPDRSTPIGQMIDAYLKSSVEMDDHVIHLLFSANRWEAVKTIRQLLASGTT 139
Query: 142 LIVDRYSYSGVAFSSAK---GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER 198
++ DRY +SG+ +S+AK + + W +AP+IGL PD VL+LD+ A RGG+GGE
Sbjct: 140 ILCDRYYHSGIVYSAAKHNPSLSLHWARAPDIGLPRPDLVLFLDLDEATAKSRGGWGGEV 199
Query: 199 YEHLEFQRKVAQCYQML------------------------RDSSWKIIDACQSIEDVEK 234
YE E QR+V + + L + ++DA S+E+V +
Sbjct: 200 YERGEMQRRVRELFWGLAMGRIGADGGLGDEDRRVDREFRQEEEDLVVVDAGASVEEVAE 259
Query: 235 QLKEIVLDQVTACKKGK 251
+ E V +V +KG+
Sbjct: 260 GIWEKVQPRVELVEKGQ 276
>gi|291415048|ref|XP_002723765.1| PREDICTED: thymidylate kinase isoform 2 [Oryctolagus cuniculus]
Length = 188
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 133/207 (64%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L++ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH++HLLFSANRWE+ ++ KL G TL+VDRY++SGVAF+SAK + +
Sbjct: 65 DHSVHLLFSANRWEQVPFIKEKLSQGVTLVVDRYAFSGVAFTSAKELKL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIE 230
+AA RG +G ERYE FQ + Q + Q++RD S WK++DA +SIE
Sbjct: 114 ------------AEAASRGEFGCERYESRAFQERALQGFHQLMRDPSLNWKMVDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
DV ++++ + D + + + +P LW
Sbjct: 162 DVHEEIRALSEDAILSAAQ-RPLGELW 187
>gi|330916235|ref|XP_003297345.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
gi|311330039|gb|EFQ94563.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
Length = 155
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 108/149 (72%), Gaps = 3/149 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+V EGLDR GK++QC +L+ L+ G V RFPDRTT +GQMI++YLS S
Sbjct: 2 TRGKLIVFEGLDRAGKSTQCQKLVEDLQNDGMKVRHMRFPDRTTPIGQMINSYLSGDSEQ 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
+DH IHLLFSANRWE + ++A L AGTT+I+DRY YSG +S+AK + +EWC+ PE
Sbjct: 62 EDHVIHLLFSANRWEAANSIQADLTAGTTIIIDRYYYSGCVYSAAKQKHDMSLEWCRNPE 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGER 198
+GL PD ++LDI E AA+RGGYG E+
Sbjct: 122 LGLPRPDLCIFLDISAEDAAKRGGYGTEK 150
>gi|302563323|ref|NP_001181704.1| thymidylate kinase [Macaca mulatta]
Length = 188
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 131/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH +HLLFSANRWE+ +++ KL G TLIVDRY++SGVAF+ AK + +
Sbjct: 65 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKELQL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIE 230
AA+RG YG ERYE+ FQ + QC+ Q++RD++ WK++DA +SIE
Sbjct: 114 ------------ADAAKRGAYGHERYENRAFQERALQCFHQLMRDTTLNWKMVDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
V + ++ + D + + KP LW
Sbjct: 162 AVHEDIRVLSEDAIHTATE-KPLGELW 187
>gi|449266948|gb|EMC77926.1| Thymidylate kinase, partial [Columba livia]
Length = 169
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 93 DRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGV 152
+RTT +GQ+IS+YL + +L+DHT+HLLFSANRWE +M+ KL G TL+VDRY++SGV
Sbjct: 1 ERTTEIGQLISSYLLKEKNLEDHTVHLLFSANRWEHVPLMKEKLHQGITLVVDRYAFSGV 60
Query: 153 AFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC 211
AF+SAK ++WCK P++GL PD +L+L + PE+AAERG +G ERYE+ FQ KV Q
Sbjct: 61 AFTSAKENFCLDWCKQPDVGLPKPDLILFLQLSPEEAAERGNFGNERYENSSFQEKVLQS 120
Query: 212 -YQMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
Y +++D + WK ++A + IED+ +++K I + + + KP LW
Sbjct: 121 YYHLMKDKTLNWKTMNASKGIEDLHREIKSIAEETMREV-QNKPLGELW 168
>gi|145505513|ref|XP_001438723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405895|emb|CAK71326.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 122/185 (65%), Gaps = 6/185 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG + LEGLD+ GK++Q L L S FPDRTT +G +IS YL ++
Sbjct: 13 NRGVFIALEGLDKSGKSTQAKLLSQKLNAKKVS-----FPDRTTQLGLIISDYLRGNKNM 67
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D IHLLFSANRWE+ + + +L+ GT ++ DRY+YSGVAFS+AKG+ IEWCKAP+ GL
Sbjct: 68 SDEVIHLLFSANRWEQHTSILKQLQDGTNIVSDRYAYSGVAFSAAKGLPIEWCKAPDAGL 127
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
+ PD YL P E+ ++RG YG E YE+ FQ+KV + Q+ + ++ IDA +SI++
Sbjct: 128 IQPDMTFYLTAPIEELSKRGDYGKEIYENSSFQQKVGSFFDQLALEENFYKIDALKSIDE 187
Query: 232 VEKQL 236
++ ++
Sbjct: 188 IQAEI 192
>gi|302410089|ref|XP_003002878.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
gi|261357902|gb|EEY20330.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
Length = 285
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 141/256 (55%), Gaps = 27/256 (10%)
Query: 23 SKFHLNCLPKCSCTPFRMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGL 82
SK ++ + + M+ L + +RGALV+LEGLDR GKT+Q L L
Sbjct: 21 SKAAVSPEKEATAPSIAMDDGQLLAPESAITRGALVILEGLDRSGKTTQVKLLEQRFVEL 80
Query: 83 GHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTL 142
G V++ RFPDR+T +GQMI AYL + +DDH IHLLFSANRWE + L +GTT+
Sbjct: 81 GKKVKVMRFPDRSTPIGQMIDAYLKSSVEMDDHVIHLLFSANRWEAVKTIRQLLASGTTV 140
Query: 143 IVDRYSYSGVAFSSAK---GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERY 199
+ DRY +SG+ +S+AK + + W +AP++GL PD VL+LD+ A RGG+GGE Y
Sbjct: 141 LCDRYYHSGIVYSAAKHNPSLSLHWARAPDVGLPRPDLVLFLDLDEATAKSRGGWGGELY 200
Query: 200 EHLEFQRKVAQCYQML------------------------RDSSWKIIDACQSIEDVEKQ 235
E E QR+V + + L + ++DA S+E+V +
Sbjct: 201 ERGEMQRRVRELFWGLAMGRIGADGGLGDEDRRVDREFRQEEEDLVVVDAGASVEEVAEG 260
Query: 236 LKEIVLDQVTACKKGK 251
+ E V +V +KG+
Sbjct: 261 IWEKVQPRVELVEKGQ 276
>gi|330803239|ref|XP_003289616.1| thymidylate kinase [Dictyostelium purpureum]
gi|325080317|gb|EGC33878.1| thymidylate kinase [Dictyostelium purpureum]
Length = 192
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 128/204 (62%), Gaps = 17/204 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGH-SVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG ++ EG DR GK++Q L +++ + + RFPDRTT +GQ+++ YL N +++
Sbjct: 4 RGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYLQNSTNM 63
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD +HLLFS+NRWE + + L +GT ++VDRYSYSGVA+++AKGID++WC + E GL
Sbjct: 64 DDRALHLLFSSNRWEAKDSILELLNSGTNIVVDRYSYSGVAYTAAKGIDVDWCYSCESGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD V YL + E A +RG YGGERYE + SWK+I+A +++E+V
Sbjct: 124 PEPDIVFYLSMSTEDATKRGDYGGERYE---------------KRPSWKVINANRTVEEV 168
Query: 233 EKQLKEIVLDQVTACKKGKPFSLL 256
++ +I + + +K KP L
Sbjct: 169 SNEINQIFDFEFESLQK-KPIGTL 191
>gi|402889936|ref|XP_003908253.1| PREDICTED: thymidylate kinase [Papio anubis]
Length = 209
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 26 RGALIVLEGMDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 85
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH +HLLFSANRWE+ +++ KL G TLIVDRY++SGVAF+ AK + +
Sbjct: 86 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGVAFTGAKELQL----------- 134
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC-YQMLRDSS--WKIIDACQSIE 230
AA+RG YG ERYE+ FQ + QC YQ++RD++ WK++DA +SIE
Sbjct: 135 ------------ADAAKRGAYGHERYENRAFQERALQCFYQLMRDTTLNWKMVDASKSIE 182
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
V + + + D + + KP LW
Sbjct: 183 AVHEDICALSEDAIRTATE-KPLGELW 208
>gi|270011758|gb|EFA08206.1| hypothetical protein TcasGA2_TC005833 [Tribolium castaneum]
Length = 242
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EG+DR GK++QC +L+ L+ + L FPDRTTS G +I YL ++HL
Sbjct: 35 RGALIVVEGVDRSGKSTQCRKLVESLKARNVNAALVTFPDRTTSTGGLIDKYLKQETHLC 94
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPEIGL 172
D IHL+F+ANRWEK++ ME LK G TL+VDRYSYSG+ +SS K + ++WC+ PE GL
Sbjct: 95 DEAIHLMFTANRWEKKAEMERLLKQGVTLVVDRYSYSGIVYSSVKKNMSVKWCQEPENGL 154
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-SSWKIIDACQSIED 231
L PD VL L + + +R YG E YE+ E Q KVAQ ++ L + W+++ A +ED
Sbjct: 155 LKPDLVLLLVLSEAEMVKRPNYGSEIYENREMQEKVAQAFRDLSEREKWEVVSADGGVED 214
Query: 232 VEKQLKEIVLDQVT 245
V K+L + V+ +V+
Sbjct: 215 VHKELLDKVIKKVS 228
>gi|334347508|ref|XP_003341935.1| PREDICTED: thymidylate kinase-like isoform 2 [Monodelphis
domestica]
Length = 188
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 132/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++ +YL + +++
Sbjct: 5 RGALIVLEGMDRAGKTTQGRKLVAALLQSGHPAELLRFPERSTEIGKLLGSYLEKKKNME 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DHT+HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSRGVTLVVDRYAFSGVAFTSAK--------------- 109
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQ-CYQMLRDSS--WKIIDACQSIE 230
++ +AA+RG +G ERYE+ FQ K Q YQ+++D S WK IDA ++IE
Sbjct: 110 --------ELSSVEAAKRGDFGNERYENNTFQEKALQRFYQLMKDDSLNWKTIDASKNIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
D+ K++ + + + ++ P LW
Sbjct: 162 DLHKEIYSLSEETIQMVQE-MPVGELW 187
>gi|342881732|gb|EGU82564.1| hypothetical protein FOXB_06930 [Fusarium oxysporum Fo5176]
Length = 254
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 132/223 (59%), Gaps = 25/223 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L G V++ RFPDRTT +GQMI AYL + +D
Sbjct: 23 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDAYLKSDVEMD 82
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE +++ L +GTT++ DRY +SG+ +S+AK + + W +APE
Sbjct: 83 DHVIHLLFSANRWEAVKQIQSLLASGTTIVCDRYYHSGIVYSAAKQNPSLTLPWARAPER 142
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV---------------AQCYQML 215
GL PD VL+LD+ E+A RGG+GGE YE + Q++V AQ +
Sbjct: 143 GLPRPDLVLFLDLTEEQAQARGGWGGEVYERSDMQKRVRELFWGLSMGGKDVAAQGLGLD 202
Query: 216 RDSSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
W ++DA S+E+V +++ + V +V ++G+
Sbjct: 203 EGEGWTQEEEDLVVVDAGGSVEEVAEEVWKKVRGRVEQVERGE 245
>gi|296206037|ref|XP_002750036.1| PREDICTED: thymidylate kinase isoform 2 [Callithrix jacchus]
Length = 188
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 131/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L LGH EL RFP+R+T +G+++S+YL +S L+
Sbjct: 5 RGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSDLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH++HLLFSANRWE+ +++ KL G TL++DRY++SGVAFS AK + +
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVMDRYAFSGVAFSGAKELQL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIE 230
AA+R +G ERYE+ FQ + QC+ Q++RD++ WK++DA +SIE
Sbjct: 114 ------------ADAAKRSAFGHERYENGAFQERALQCFHQLMRDTTVNWKMVDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
V + + + D + + KP LW
Sbjct: 162 AVHEDILVLAEDAIRTATE-KPLGELW 187
>gi|300120775|emb|CBK21017.2| unnamed protein product [Blastocystis hominis]
Length = 208
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 123/198 (62%), Gaps = 4/198 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V+EG+DR GKTSQC R++ L + + + FP+RTT +GQ I+ YL N + ++
Sbjct: 3 RGVFIVIEGVDRSGKTSQCHRIVERLNAEDITAKFYGFPNRTTQIGQQINKYLQNATEIE 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H +HLLFSANRWE + LK G +I DRY SGVA+S +G+D+EWC + GL
Sbjct: 63 NHCVHLLFSANRWELSKSILEDLKNGVNIICDRYIASGVAYSVTRGLDMEWCIHSDKGLP 122
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS----SWKIIDACQSI 229
APD L++P E+ R G+G ER E EFQ+ VA+ ++ L +W + A SI
Sbjct: 123 APDVTFQLELPIEEQMRRAGFGEERLETREFQQSVAEAFRRLSSEFYPYTWTPVSALGSI 182
Query: 230 EDVEKQLKEIVLDQVTAC 247
++V ++L +V + ++ C
Sbjct: 183 DEVHERLYGLVKNAISDC 200
>gi|296425149|ref|XP_002842105.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638364|emb|CAZ86296.1| unnamed protein product [Tuber melanosporum]
Length = 214
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 129/185 (69%), Gaps = 3/185 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGAL+ +EGLDR GK++QC L+ L L +FPDRTT +G+MI+AYLS + L
Sbjct: 8 TRGALIAIEGLDRAGKSTQCQLLMDRLAERNVPARLQKFPDRTTPIGKMINAYLSTSTTL 67
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DHTIHLLFSANRWE + + L G T+++DRY YSG+ FS+AKG+ +++C+AP++GL
Sbjct: 68 EDHTIHLLFSANRWELSAHILKLLNDGVTIVLDRYVYSGIVFSAAKGLSLDYCRAPDVGL 127
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
D VL+LD+ E A RGG+GGERYE QR+V ++ + + W+++DA +S+
Sbjct: 128 PRADVVLFLDLDAEVARRRGGFGGERYEVEAVQRRVRDLFKEVGEKEEGRWRVVDAGRSV 187
Query: 230 EDVEK 234
E+V +
Sbjct: 188 EEVRE 192
>gi|4974|emb|CAA46698.1| thymidylate kinase [Schizosaccharomyces pombe]
Length = 210
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 128/195 (65%), Gaps = 8/195 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+V+EGLDR GK++QC L+ L ++L++FPDRTT++G+ I YL+ L
Sbjct: 5 NRGRLIVIEGLDRSGKSTQCQLLVDKLILNMKRLKLFKFPDRTTAIGKKIDDYLTESVQL 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+D IHLLFSANRWE A + I+DRY++SG+AFS+AKG+D EWCK+P+ GL
Sbjct: 65 NDQVIHLLFSANRWEPSIYYRAN-QQRCNCILDRYAFSGIAFSAAKGLDWEWCKSPDRGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKII--DAC 226
PD V++L++ P AA RG YG ERYE +E Q KV + Q L R+ + I DA
Sbjct: 124 TRPDLVIFLNVDPRIAATRGQYGEERYEKIEMQEKVLKNLQRLQKEFREEGLEFITLDAS 183
Query: 227 Q-SIEDVEKQLKEIV 240
++EDV+ Q+ ++V
Sbjct: 184 SYALEDVDSQIVDLV 198
>gi|294979332|pdb|2WWF|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Tmp And Adp
gi|294979333|pdb|2WWF|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Tmp And Adp
gi|294979334|pdb|2WWF|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Tmp And Adp
gi|294979335|pdb|2WWG|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Dgmp And Adp
gi|294979336|pdb|2WWG|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Dgmp And Adp
gi|294979337|pdb|2WWG|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Dgmp And Adp
gi|294979338|pdb|2WWH|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Ap5dt
gi|294979339|pdb|2WWH|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Ap5dt
gi|294979340|pdb|2WWH|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Ap5dt
gi|294979341|pdb|2WWI|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Aztmp And Adp
gi|294979342|pdb|2WWI|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Aztmp And Adp
gi|294979343|pdb|2WWI|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Aztmp And Adp
Length = 212
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 128/208 (61%), Gaps = 7/208 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +V EGLDR GK++Q L+ YL+ V+ FP+R T +GQ+IS YL ++ +
Sbjct: 9 KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSMS 68
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+ TIHLLFSANRWE + +++ L G ++ DRY+YSGVA+SS A ++ WC P+ GL
Sbjct: 69 NETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKTWCMNPDQGL 128
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RDSSWKIIDACQSIED 231
+ PD V YL++PP A R YG E YE +E Q+K+ + Y+ + W IDA + IED
Sbjct: 129 IKPDVVFYLNVPPNYAQNRSDYGEEIYEKVETQKKIYETYKHFAHEDYWINIDATRKIED 188
Query: 232 VEKQLKEIVLDQVTACK-KGKPFSLLWS 258
+ ++ +VT K + + F+ LWS
Sbjct: 189 IHND----IVKEVTKIKVEPEEFNFLWS 212
>gi|331220445|ref|XP_003322898.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309301888|gb|EFP78479.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 228
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 19/211 (9%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+ N RG+ +V EGLDR GK++QC RL L+ G +VE RFPDRTT++GQMI++YL
Sbjct: 1 MANTTQRGSFIVFEGLDRSGKSTQCRRLEEKLKQAGRTVESIRFPDRTTAIGQMINSYLC 60
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
S LDDH IHLLF+ANRWEK + + L++GTT+I DRY++SG AF++AK I
Sbjct: 61 QTSELDDHAIHLLFAANRWEKSADIHTTLRSGTTIICDRYAFSGTAFTAAK-FSIRTPPE 119
Query: 168 PEI---------GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVA-QCYQMLRD 217
PE GL PD V++L + + R G+G ERYE+ E Q +V Q Q++R
Sbjct: 120 PEPIATLACADRGLPLPDLVIFLTLGDQSLDNREGFGNERYENTELQDEVKRQFTQVVRP 179
Query: 218 --------SSWKIIDACQSIEDVEKQLKEIV 240
W +DA +IE+VE+++ +V
Sbjct: 180 YFEEIHGRDRWVNVDATGTIEEVEQRIWHVV 210
>gi|124807055|ref|XP_001350897.1| thymidylate kinase, putative [Plasmodium falciparum 3D7]
gi|23497027|gb|AAN36577.1|AE014852_21 thymidylate kinase, putative [Plasmodium falciparum 3D7]
Length = 210
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 128/208 (61%), Gaps = 7/208 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +V EGLDR GK++Q L+ YL+ V+ FP+R T +GQ+IS YL ++ +
Sbjct: 7 KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSMS 66
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+ TIHLLFSANRWE + +++ L G ++ DRY+YSGVA+SS A ++ WC P+ GL
Sbjct: 67 NETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKTWCMNPDQGL 126
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RDSSWKIIDACQSIED 231
+ PD V YL++PP A R YG E YE +E Q+K+ + Y+ + W IDA + IED
Sbjct: 127 IKPDVVFYLNVPPNYAQNRSDYGEEIYEKVETQKKIYETYKHFAHEDYWINIDATRKIED 186
Query: 232 VEKQLKEIVLDQVTACK-KGKPFSLLWS 258
+ ++ +VT K + + F+ LWS
Sbjct: 187 IHND----IVKEVTKIKVEPEEFNFLWS 210
>gi|116200466|ref|XP_001226045.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
gi|88175492|gb|EAQ82960.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
Length = 317
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 106/158 (67%), Gaps = 3/158 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGALVVLEGLDR GKT+Q L LG V++ RFPDRTT +GQMI +YL +Q +
Sbjct: 63 ARGALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLKSQVEM 122
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWE + L TT++ DRY +SG+ +SSAK + + W + PE
Sbjct: 123 DDHVIHLLFSANRWEAAKTITHLLTQSTTVLCDRYYHSGIVYSSAKQNPSLTLPWARGPE 182
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRK 207
IGL PD VL+LD+ +A RGG+GGE YE E QR+
Sbjct: 183 IGLPRPDLVLFLDLDENQARARGGWGGEAYERAEMQRR 220
>gi|308472179|ref|XP_003098318.1| hypothetical protein CRE_07671 [Caenorhabditis remanei]
gi|308269166|gb|EFP13119.1| hypothetical protein CRE_07671 [Caenorhabditis remanei]
Length = 210
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGH-SVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG L+V EGLDR GK++Q RL+ L S L FPDR++ +G++I YL + L
Sbjct: 7 RGVLIVFEGLDRSGKSTQAKRLVESLNKRAEGSAVLQAFPDRSSPIGKLIDQYLKKEIDL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D+H++HL+FSA+R+ K M+ + G +I DRY YSGVA+S AKG+ +W ++ ++GL
Sbjct: 67 DEHSLHLMFSADRFLKNQMIRENIAKGIDVICDRYCYSGVAYSLAKGLPEQWVRSSDVGL 126
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKIIDACQSIED 231
PD+VL+ D+ P AA+RGG+G ER E Q+KVA LRD S WK ++A ++
Sbjct: 127 PKPDAVLFFDVSPAVAAQRGGFGAERLETATMQQKVAAVMPTLRDDSFWKTVNADGDLDT 186
Query: 232 VEKQLKEIVLDQVTACKKGKPFSLL 256
VEK V + KPF L
Sbjct: 187 VEKD----VFRLYENLNREKPFESL 207
>gi|320582782|gb|EFW96999.1| Thymidylate and uridylate kinase [Ogataea parapolymorpha DL-1]
Length = 210
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-H 111
+RG L+ +EGLDR GKT+Q SRLL L+ G L +FP+RTT +G++I+ YL++++
Sbjct: 2 TRGVLIAIEGLDRTGKTTQTSRLLERLDKSGVDATLIKFPERTTPIGRIINTYLTDKAFE 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
L D + HLLFSANRWE + L+ G T+++DRY YSGVA+SSAKG+ +WC +P++G
Sbjct: 62 LSDQSAHLLFSANRWELAEKIRNLLEDGKTVVLDRYVYSGVAYSSAKGLPFDWCLSPDLG 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-SSWKIIDA-CQSI 229
L PD VL++ E R G+G ERYE EFQ++V ++ ++ +WK I +SI
Sbjct: 122 LPKPDIVLFMKFKHEDNVTREGFGEERYEVAEFQQRVKTQFEKFQNEDNWKTIYVDNKSI 181
Query: 230 EDV 232
E+V
Sbjct: 182 EEV 184
>gi|406866431|gb|EKD19471.1| thymidylate kinase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 238
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 130/206 (63%), Gaps = 8/206 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V+EGLDR GKT+Q R+ L GH+V+ RFPDRT+ +G MI YL + +
Sbjct: 19 TRGAFIVIEGLDRAGKTTQVKRICDRLYASGHNVKTIRFPDRTSPIGSMIDRYLQSALEM 78
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWEK + L +G+T++ DRY YSG+ +S+AK + + W ++P+
Sbjct: 79 DDHAIHLLFSANRWEKAKWIRNTLASGSTIVCDRYYYSGMVYSAAKQNPSLSLSWAQSPD 138
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-----RDSSWKIID 224
GL PD V++LD+ E+A +RGGYG E+YE + Q +V + + L + ++++
Sbjct: 139 AGLPKPDVVVFLDLEAEEAEKRGGYGEEKYEKRDMQMRVRELFLALLEGEGDEKGMRVVN 198
Query: 225 ACQSIEDVEKQLKEIVLDQVTACKKG 250
A ++ V +++ + V V A +G
Sbjct: 199 AGAGVDVVGERIWKEVEGVVRAVSEG 224
>gi|259013537|ref|NP_001158503.1| thymidylate kinase isoform 2 [Homo sapiens]
gi|114584337|ref|XP_001161587.1| PREDICTED: uncharacterized protein LOC744320 isoform 1 [Pan
troglodytes]
gi|397483841|ref|XP_003813099.1| PREDICTED: thymidylate kinase [Pan paniscus]
gi|219521040|gb|AAI71902.1| LOC727761 protein [Homo sapiens]
gi|410208478|gb|JAA01458.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410248950|gb|JAA12442.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410330051|gb|JAA33972.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
Length = 188
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 132/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK + +
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKELQL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIE 230
AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SIE
Sbjct: 114 ------------ADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
V + ++ + D + + KP LW
Sbjct: 162 AVHEDIRVLSEDAIRTATE-KPLGELW 187
>gi|322712668|gb|EFZ04241.1| thymidylate kinase, putative [Metarhizium anisopliae ARSEF 23]
Length = 257
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 131/227 (57%), Gaps = 29/227 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L G V + RFPDRTT +GQMI AYL + ++
Sbjct: 22 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVRVMRFPDRTTPIGQMIDAYLKSDVQME 81
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE ++ L AGTT+I DR+ +SG+ +S+AK + + W +APE
Sbjct: 82 DHVIHLLFSANRWEAVDQIKTLLAAGTTVISDRFYHSGIVYSAAKLNPSLPLSWARAPER 141
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-------------QM--- 214
GL PD VL+LD+ E A RGG+GGE YE E Q++V + + +M
Sbjct: 142 GLPRPDVVLFLDLDEETARARGGWGGELYEKAEMQKRVRELFWGLSMGGKDIQGQEMLAG 201
Query: 215 ---LRDSSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
L + W+ ++DA S+E+V ++ + +V ++G+
Sbjct: 202 LGGLEGAQWRQEEEDLVVVDAGGSVEEVADRIWGTLEGRVAQVERGE 248
>gi|268529284|ref|XP_002629768.1| Hypothetical protein CBG01006 [Caenorhabditis briggsae]
Length = 213
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 125/206 (60%), Gaps = 5/206 (2%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ RGAL+V EGLDR GK++Q RL+ + G L FPDR + VG+MI YL +
Sbjct: 9 EERGALIVFEGLDRSGKSTQAQRLVEKIINSGRMAVLQAFPDRQSPVGEMIDRYLRGEID 68
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
+D+H +HLLFSA+R+ K+ M++ + G ++ DRY YSGV++S AKG+ +W + + G
Sbjct: 69 MDEHALHLLFSADRFLKKKMIKQHIAQGVDVVCDRYCYSGVSYSLAKGLPEDWVRVTDQG 128
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKIIDACQSIE 230
L PD VL+ + PE AA RGG+G ER E + Q +VA+ LRD + WK ++A ++
Sbjct: 129 LPKPDIVLFFQVSPEVAASRGGFGNERLETAQLQAEVAKVMPTLRDDAFWKSVNADAALA 188
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLL 256
VEK+ V T + KP +L
Sbjct: 189 AVEKE----VFQLYTELDRSKPLEVL 210
>gi|301775533|ref|XP_002923194.1| PREDICTED: thymidylate kinase-like [Ailuropoda melanoleuca]
Length = 204
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 125/176 (71%), Gaps = 5/176 (2%)
Query: 86 VELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVD 145
EL RFP+R+T +G+++S+YL +S ++DH++HLLFSANRWE+ +++ KL G TL+VD
Sbjct: 29 AELLRFPERSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKKKLSQGITLVVD 88
Query: 146 RYSYSGVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEF 204
RY++SGVAF+SAK ++WCK P++GL PD V++L + +AA RG +G ERYE+ F
Sbjct: 89 RYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARRGEFGRERYENGNF 148
Query: 205 Q-RKVAQCYQMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
Q R + + +Q++ D + WK++DA +SIEDV K++ + + + A + +P LW
Sbjct: 149 QERALHRFHQLMADETLNWKMVDASKSIEDVHKEIHALSVGAIQAAAQ-RPLGELW 203
>gi|422933885|ref|YP_007003944.1| thymidylate kinase [Cyprinid herpesvirus 2]
gi|386686198|gb|AFJ20550.1| thymidylate kinase [Cyprinid herpesvirus 2]
Length = 253
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 134/231 (58%), Gaps = 44/231 (19%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++QC L+ L GH EL RFPDR+T +G++I++YL+N++ LD
Sbjct: 4 RGALIVLEGVDRAGKSTQCKLLVDALVNQGHCAELLRFPDRSTVLGRVINSYLTNKTDLD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------------- 158
HLLFSANRWE ++ +K+++G TL+VDRY++SG+ F++AK
Sbjct: 64 ARAAHLLFSANRWELEPLIRSKIESGVTLVVDRYAFSGICFTAAKVCGGGSSSNSKVAPL 123
Query: 159 --------------------------GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERG 192
+EWCK + GL PD VL+LD+ AA+RG
Sbjct: 124 ECVNSKVEQESARALECINSKVEEEESAVLEWCKNSDRGLPRPDLVLFLDLETSAAAKRG 183
Query: 193 GYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIEDVEKQLKEIV 240
GYG ER+E+ FQ KV + L +D +W+++++ ++ E + + +K +
Sbjct: 184 GYGQERFENEPFQSKVRALFLKLSTEQDINWQVVESDKTKEQLHQDIKRLT 234
>gi|16768438|gb|AAL28438.1| GM04626p [Drosophila melanogaster]
Length = 171
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 107/153 (69%), Gaps = 3/153 (1%)
Query: 91 FPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYS 150
FP+R++S+GQ+I++YL+N L D IHL+FSANRWE + ++ KL GTTL+VDRYS+S
Sbjct: 3 FPERSSSIGQVINSYLTNSKDLPDEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYSFS 62
Query: 151 GVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQ 210
GVA+S+AKG+D +WC APE GL+ PD+V YL PP RG YG ERYE +EFQ +VA+
Sbjct: 63 GVAYSAAKGLDFDWCYAPERGLIKPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAE 122
Query: 211 CYQML---RDSSWKIIDACQSIEDVEKQLKEIV 240
+ + S + DA QS+ED+ Q+ I
Sbjct: 123 VFNRICSKEGSYFHQFDARQSVEDLHAQIASIT 155
>gi|46130830|ref|XP_389146.1| hypothetical protein FG08970.1 [Gibberella zeae PH-1]
Length = 270
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 131/224 (58%), Gaps = 25/224 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +VLEGLDR GKT+Q L G V++ RFPDRTT +GQMI YL + +
Sbjct: 22 NRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDNYLKSNVEM 81
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWE +++ L +GTT++ DRY +SG+ +S+AK + + W +APE
Sbjct: 82 DDHVIHLLFSANRWEAVKQIQSLLASGTTILCDRYYHSGIVYSAAKQNPSLTLPWARAPE 141
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV---------------AQCYQM 214
GL PD VL+LD+ E+A RGG+GGE YE Q++V AQ +
Sbjct: 142 RGLPRPDLVLFLDLTEEQAQARGGWGGEVYERSGMQKRVRELFWGLSMGGKDIAAQGLGL 201
Query: 215 LRDSSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
W ++DA S+E+V +++ + V +V ++G+
Sbjct: 202 DEGEGWTQEEEDLVVVDAGGSVEEVNEEVWKKVRARVEQVERGE 245
>gi|297669949|ref|XP_002813146.1| PREDICTED: thymidylate kinase isoform 2 [Pongo abelii]
Length = 188
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 131/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK + +
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKELQL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIE 230
AA+RG +G ERYE+ FQ + C+ Q++RD++ WK++DA +SIE
Sbjct: 114 ------------ADAAKRGAFGHERYENRAFQERALWCFHQLMRDTTLNWKMVDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
V + ++ + D + + KP LW
Sbjct: 162 AVHEDIRMLSEDVICTATE-KPLGELW 187
>gi|310799971|gb|EFQ34864.1| thymidylate kinase [Glomerella graminicola M1.001]
Length = 271
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 134/241 (55%), Gaps = 26/241 (10%)
Query: 37 PFRMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT 96
P + SS+++ RGA + EGLDR GKT+Q L LG V++ RFPDRTT
Sbjct: 22 PAGEDGSSAVKPPAGVVRGAFIAFEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRTT 81
Query: 97 SVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS 156
+GQMI AYL + ++DH IHLLFSANRWE ++ L +GTT+I DRY +SG+ +S+
Sbjct: 82 PIGQMIDAYLKSSVEMEDHVIHLLFSANRWEAVKNIQTLLASGTTVICDRYYHSGIVYSA 141
Query: 157 AKG---IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ 213
AK + + W + PE+GL PD VL+LD+ A ERGG+G E YE EFQR+V +
Sbjct: 142 AKQNPHLTLHWARQPELGLPRPDLVLFLDLEEAIARERGGWGDEVYEKAEFQRRVRDLFW 201
Query: 214 ML-----------------------RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKG 250
L + ++DA S+E+V +++ V +V +KG
Sbjct: 202 GLSLGRVGPDGGLGEKGRVDREFRQEEEDLVVVDAGASVEEVAEEIWRKVGPRVEGVEKG 261
Query: 251 K 251
+
Sbjct: 262 E 262
>gi|17535647|ref|NP_496151.1| Protein R53.2 [Caenorhabditis elegans]
gi|3024082|sp|Q22018.1|KTHY_CAEEL RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|3879168|emb|CAA91347.1| Protein R53.2 [Caenorhabditis elegans]
Length = 218
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLE---------GLGHSVELWRFPDRTTSVGQMISA 104
RG L+V EGLDR GK++Q RL+ + S L FPDR++S+G++I
Sbjct: 7 RGLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSIGKLIDQ 66
Query: 105 YLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
YL + +D+H +HLLFSA+R+ K M+ + G +I DRY YSGVA+S AKG+ +W
Sbjct: 67 YLRKEIDMDEHALHLLFSADRFSKNQMIRDNIAKGIDVICDRYCYSGVAYSLAKGLPEQW 126
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKII 223
++ ++GL PD+VL+ D+ PE AA+RGG+G ER E Q+KVA LRD + WK +
Sbjct: 127 VRSSDVGLPKPDAVLFFDVSPEVAAQRGGFGEERLETATIQQKVAAVMPTLRDDAYWKTV 186
Query: 224 DACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+A ++ VEK + I + + KPF L
Sbjct: 187 NADGDLDSVEKNVFRIYEN----LDREKPFESL 215
>gi|294950385|ref|XP_002786603.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
gi|239900895|gb|EER18399.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
Length = 233
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLSNQS- 110
+RGA +VLEGLDR GK++Q R+ L + G V FP R++++G+M+ YL + S
Sbjct: 2 ARGAFIVLEGLDRSGKSTQLRRISEALRQRTGKEVVEMGFPRRSSAIGKMLDTYLRDSSS 61
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG-IDIEWCKAPE 169
+ D +HLLFSANRWE S M + L AG ++ DRY +SGVA+++ KG +D EWCK+ +
Sbjct: 62 KMRDEAVHLLFSANRWEAMSEMLSHLAAGRHIVCDRYIFSGVAYTAMKGTVDFEWCKSVD 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQS 228
+GL PD V++LD+ PE AA+RG YG ERYE + Q KV Y + ++ W+I DA +
Sbjct: 122 VGLPKPDLVVFLDLSPEAAAKRGAYGEERYEKEDLQMKVRTMYTKFEKEPFWRIFDADRP 181
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSL 255
E+V + + + + A +K S+
Sbjct: 182 AEEVTRTVTDAAVAVAQALEKDNAMSI 208
>gi|432107262|gb|ELK32676.1| Thymidylate kinase [Myotis davidii]
Length = 178
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 94 RTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVA 153
R+T +G+++S+YL +S ++DH++HLLFSANRWE+ +++ +L G TLIVDRY++SGVA
Sbjct: 11 RSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKERLSQGITLIVDRYAFSGVA 70
Query: 154 FSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
F++AK + WCK P++GL PD V++L + + ERGG+G ERYE FQ +V QCY
Sbjct: 71 FTNAKENFSLHWCKQPDVGLPKPDLVVFLQLRLAEVVERGGFGQERYEDGAFQERVLQCY 130
Query: 213 QML---RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
L R +WK++DA +SIEDV K+++ + D + A + +P LW+
Sbjct: 131 HQLMEDRTLNWKVVDASKSIEDVHKEIRTLSEDIIQAAAQ-RPLGKLWT 178
>gi|358382426|gb|EHK20098.1| hypothetical protein TRIVIDRAFT_77280 [Trichoderma virens Gv29-8]
Length = 264
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 130/230 (56%), Gaps = 32/230 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L G V++ RFPDRTT +GQMI YL + +
Sbjct: 29 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGRPVKVMRFPDRTTPIGQMIDGYLKSHVDMS 88
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH IHLLFSANRWE + A L AG T++ DR+ +SG+ +S+AK + + W +AP+
Sbjct: 89 DHAIHLLFSANRWEAAQQIRAYLAAGITVVSDRFYHSGIVYSAAKKNPHLPLAWARAPDT 148
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--------------- 215
GL PD VL+LD+ E A RGG+G E+YE E QR V + + L
Sbjct: 149 GLPRPDVVLFLDLDEEAARARGGWGSEKYEKEEMQRTVRELFWALSMGGKDIKGQDLLQQ 208
Query: 216 ----RDSSWK-------IIDACQSIEDVEKQLKEIV---LDQVTACKKGK 251
+SW+ ++DA +++E+V + + V +D+V A + GK
Sbjct: 209 LGGIEGASWRQDEEDIVVVDASRTVEEVSEAIWRKVRARVDRVEAGEMGK 258
>gi|340519189|gb|EGR49428.1| predicted protein [Trichoderma reesei QM6a]
Length = 274
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 131/230 (56%), Gaps = 32/230 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L G V++ RFPDRTT +GQMI YL + L+
Sbjct: 39 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGRPVKVMRFPDRTTPIGQMIDGYLKSHVDLN 98
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH IHLLFSANRWE + + A L AG T++ DR+ +SG+ +S+AK + + W +AP+
Sbjct: 99 DHAIHLLFSANRWEAANQIRAYLDAGITVVSDRFYHSGIVYSAAKKNPHLPLTWARAPDT 158
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--------------- 215
GL PD VL+LD+ E A RGG+G E+YE E QR V + + L
Sbjct: 159 GLPRPDVVLFLDLDEEAARARGGWGSEKYEKEELQRTVRELFWALSMGGKDIKGQDLLQQ 218
Query: 216 ----RDSSWK-------IIDACQSIEDVEKQLKEIV---LDQVTACKKGK 251
++W+ ++DA +++E+V + + V +D+V A GK
Sbjct: 219 LGGIEGAAWRQDEEDIVVVDAGRTVEEVSEAIWRKVRARVDRVEAGDMGK 268
>gi|346318170|gb|EGX87774.1| thymidylate kinase, putative [Cordyceps militaris CM01]
Length = 240
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L L G V+L RFPDRTT +GQMI AYL + +D
Sbjct: 15 RGAFIVLEGLDRSGKTTQVKLLEQKLVDQGKKVKLMRFPDRTTQIGQMIDAYLKSAVRMD 74
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEI 170
DH IHLLFSANRWE + L +GTT++ DRY++SG+ +S+AKG + + W +A +
Sbjct: 75 DHAIHLLFSANRWEAAETINTILASGTTIVCDRYAHSGMVYSAAKGLASLRLPWARAADA 134
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-----RDSSWKIIDA 225
GL PD V++LD+ A RGG+G E YE E QR+V + + L RD+ ++++
Sbjct: 135 GLPRPDRVVFLDLDEATARARGGWGEEVYERGEMQRQVRRLFGALARGDGRDADGRLVEG 194
Query: 226 CQSIE 230
E
Sbjct: 195 LTGEE 199
>gi|358392751|gb|EHK42155.1| hypothetical protein TRIATDRAFT_31632 [Trichoderma atroviride IMI
206040]
Length = 268
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 133/235 (56%), Gaps = 32/235 (13%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G RGA +VLEGLDR GKT+Q L G ++ RFPDRTT++GQ+I YL +
Sbjct: 28 GATKKRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGRPAKVMRFPDRTTAIGQLIDGYLKS 87
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWC 165
LDDH IHLLFSANRWE + + A L AG +++ DR+ +SG+ +S+AK + + W
Sbjct: 88 HVELDDHAIHLLFSANRWESAAQIRAYLAAGISVVSDRFYHSGIVYSAAKKNPHLPLSWA 147
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY------------- 212
++P++GL PD VL+LD+ E A RGG+G E+YE E QR V + +
Sbjct: 148 RSPDVGLPRPDVVLFLDLDEETARSRGGWGSEKYEKEEMQRTVRELFWALSMGGKDIKGQ 207
Query: 213 ----QM--LRDSSWK-------IIDACQSIEDVEKQLKEIV---LDQVTACKKGK 251
QM + SW+ ++DA + +EDV + + V +D+V + GK
Sbjct: 208 DLLQQMGGIEGPSWRQDEEDLVVVDASRPVEDVAEAVWRKVKARVDRVDMGEMGK 262
>gi|50303763|ref|XP_451827.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640959|emb|CAH02220.1| KLLA0B06556p [Kluyveromyces lactis]
Length = 208
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 131/201 (65%), Gaps = 13/201 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GK++QC +++ LG+ L +FPDRTT +GQ+I+ YL+++ L
Sbjct: 3 RGKLILIEGLDRTGKSTQCENVVN---ALGNDAVLIKFPDRTTKIGQLINQYLTDKDFEL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
+IHLLFSANRWE + + + LKAG +++DRY YSGVA+S+AKGI DI WC P+
Sbjct: 60 PAQSIHLLFSANRWELKEEIHSMLKAGKHVVLDRYVYSGVAYSAAKGIQGMDISWCFNPD 119
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVA----QCYQMLRDSSWKIIDA 225
GLL PD L+ +R G+G ERYE +EFQR+V + ++DS+ +ID
Sbjct: 120 KGLLKPDLTLFFS-NSSNMRDREGFGEERYEKVEFQRQVRDTFFNVFDQIKDSNRIVIDV 178
Query: 226 C-QSIEDVEKQLKEIVLDQVT 245
+SI++V ++K ++ D +
Sbjct: 179 SDKSIDEVFSEIKPLIHDVIN 199
>gi|426339165|ref|XP_004033530.1| PREDICTED: thymidylate kinase isoform 2 [Gorilla gorilla gorilla]
Length = 188
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 132/207 (63%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L G+ EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGYRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK + +
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKELQL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIE 230
AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SIE
Sbjct: 114 ------------ADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
V + ++ + D + + KP LW
Sbjct: 162 AVHEDIRVLSEDAIRTATE-KPLGELW 187
>gi|348577657|ref|XP_003474600.1| PREDICTED: thymidylate kinase-like isoform 3 [Cavia porcellus]
Length = 188
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 130/207 (62%), Gaps = 27/207 (13%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+S L GH EL RFPDR+T +G+++S+YL +S L+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVSALCAAGHRAELLRFPDRSTEIGKLLSSYLEKKSELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+SAK + +
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLYQGVTLVVDRYAFSGVAFTSAKELQL----------- 113
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQ-RKVAQCYQMLRDSS--WKIIDACQSIE 230
AA RG +G ERYE FQ R + Q++RDS+ WK++DA + IE
Sbjct: 114 ------------TDAATRGEFGHERYEEKTFQERALCGFQQLMRDSTLNWKVVDASRRIE 161
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLW 257
+V +++ + + + + KP LW
Sbjct: 162 EVHEEICTLSKAAILSAAQ-KPLGKLW 187
>gi|408393471|gb|EKJ72735.1| hypothetical protein FPSE_07135 [Fusarium pseudograminearum CS3096]
Length = 254
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 25/224 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +VLEGLDR GKT+Q L V++ RFPDRTT +GQMI YL + +
Sbjct: 22 NRGAFIVLEGLDRSGKTTQVKLLEQRFVEESKKVKVMRFPDRTTPIGQMIDNYLKSNVEM 81
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DDH IHLLFSANRWE +++ L +GTT++ DRY +SG+ +S+AK + + W +APE
Sbjct: 82 DDHVIHLLFSANRWEAVKQIQSLLASGTTILCDRYYHSGIVYSAAKQNPSLTLPWARAPE 141
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV---------------AQCYQM 214
GL PD VL+LD+ E+A RGG+GGE YE Q++V AQ +
Sbjct: 142 RGLPRPDLVLFLDLTEEQAQARGGWGGEVYERSGMQKRVRELFWGLSMGGKDVAAQGLGL 201
Query: 215 LRDSSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
W ++DA S+E+V +++ + V +V ++G+
Sbjct: 202 DEGEGWTQEEEDLVVVDAGGSVEEVNEEVWKKVRARVEQVERGE 245
>gi|324512226|gb|ADY45070.1| Thymidylate kinase [Ascaris suum]
Length = 234
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 8/201 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EG DR GK++Q R++ ++ G EL FPDR+T +G+ I YL ++
Sbjct: 4 RGALIVFEGCDRAGKSTQAQRMVGRIQARGERAELISFPDRSTDLGKFIDQYLKGNVEME 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI--EWCKAPEIG 171
HL+F+ANR M KL+ GT LIVDRY+YSG+A++ AKG+D+ EW K ++G
Sbjct: 64 PREAHLVFAANRQALVGTMRNKLQHGTHLIVDRYTYSGIAYTLAKGLDVSLEWAKIHDVG 123
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDACQS 228
+L PD VLY D+ P++A +R G+G ER E E+Q V + Q L + WK+IDA +S
Sbjct: 124 ILKPDCVLYFDLLPDEARKRSGFGDERLEAYEYQCTVYKFMQTLGSENADIWKVIDASKS 183
Query: 229 IEDVEK---QLKEIVLDQVTA 246
I++V L + VLD A
Sbjct: 184 IDEVSTDVWNLLKPVLDSAAA 204
>gi|400599405|gb|EJP67102.1| thymidylate kinase [Beauveria bassiana ARSEF 2860]
Length = 237
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L G V+L RFPDRTT VGQMI +YL + +D
Sbjct: 14 RGAFIVLEGLDRSGKTTQVKLLEQKFIEQGRLVKLMRFPDRTTPVGQMIDSYLKSAVRMD 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID---IEWCKAPEI 170
DH IHLLFSANRWE +++ L++GT ++ DRY++SG+ +S+AKG+ + W +AP++
Sbjct: 74 DHAIHLLFSANRWEAAEEIKSLLESGTNIVCDRYTHSGMVYSAAKGLPGLRLPWARAPDV 133
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDAC 226
GL PD V++LD+ A RGG+G E YE QR+V + + L RD + ++++
Sbjct: 134 GLPRPDRVVFLDLDETTARARGGWGDEVYEKAAMQRQVRRLFGALANGGRDGNGELVEGL 193
Query: 227 QSIE 230
E
Sbjct: 194 TGEE 197
>gi|242014820|ref|XP_002428083.1| thymidylate kinase, putative [Pediculus humanus corporis]
gi|212512602|gb|EEB15345.1| thymidylate kinase, putative [Pediculus humanus corporis]
Length = 601
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 132/239 (55%), Gaps = 31/239 (12%)
Query: 15 FGALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGNIDSR--------GALVVLEGLDRC 66
FG F+ ++ + + P+ ES + G +++ GAL+V EG DR
Sbjct: 369 FGYNFIYLPSDKIDTIAESEIKPY-FESLFEKKFGKLNNTLTNSDNLPGALIVFEGCDRA 427
Query: 67 GKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRW 126
GKT+QC +L+ L LG + +FP+ L+D T+HLLFSANRW
Sbjct: 428 GKTTQCKKLVEKLNELGIKSQFMQFPED-----------------LNDQTVHLLFSANRW 470
Query: 127 EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPP 185
E + M L TLIVDRYS+SGVA+S+AK G+D +WC PEIGL PD V L +P
Sbjct: 471 ENQPKMVKLLHEEVTLIVDRYSFSGVAYSAAKPGMDFKWCYKPEIGLPKPDLVFLLYVPV 530
Query: 186 EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI----EDVEKQLKEIV 240
+R G+G ERYE+ +FQ+ V Y ++D +W +IDA ++I ED+ KQ + I+
Sbjct: 531 NVLKKRIGFGEERYENNDFQQSVFDNYIKMKDDTWHLIDASKNINEIHEDILKQTQRII 589
>gi|340711578|ref|XP_003394352.1| PREDICTED: thymidylate kinase-like [Bombus terrestris]
Length = 215
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q L++ L+ G VE FPDRTT+ G++I+ YL+ + +
Sbjct: 5 RGALIVLEGCDRAGKSTQAKLLVNALKQRGIPVEQRAFPDRTTATGEIINNYLNKKLNFS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID-IEWCKAPEIGL 172
T H+LFSANRWE + + L +GTT+++DRY+ SG A+++A + WCKAP+ GL
Sbjct: 65 LETAHMLFSANRWECKDEILKSLYSGTTVVIDRYAGSGAAYTAAMTNRCLNWCKAPDRGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
+PD V++L++ E R +G ERYE+ E Q VA Y+ + D +W II+A + +
Sbjct: 125 PSPDVVIFLNVSNETQCSRSNWGSERYENNEIQSHVASNYKKIMDQTWYIINANDNKSSI 184
Query: 233 EKQLKEIVLDQVTACKK 249
Q+ + VLD + K
Sbjct: 185 HSQILQKVLDIIDKVKN 201
>gi|377830034|ref|YP_005296194.1| unnamed protein product [Cotia virus SPAn232]
gi|377830120|ref|YP_005296368.1| unnamed protein product [Cotia virus SPAn232]
gi|377814277|gb|AFB76896.1| thymidylate kinase [Cotia virus SPAn232]
gi|377814363|gb|AFB76982.1| thymidylate kinase [Cotia virus SPAn232]
Length = 210
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 126/194 (64%), Gaps = 7/194 (3%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+DSRGAL+V EGLDR GK++Q L++ L LG+ EL FP R+T +G++I+ YL +
Sbjct: 1 MDSRGALIVFEGLDRVGKSTQTRMLVNKLCNLGYKAELLEFPKRSTDIGRVITLYLEKKI 60
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA--KGIDIEWCKAP 168
L+ H +HLLFSANRWE +++ K+ G TL+VDRYS+SG+A++ A K I +EW
Sbjct: 61 DLEPHCVHLLFSANRWEHVPLIQEKINKGITLVVDRYSFSGIAYTLAKKKNISLEWTIQS 120
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDA 225
+ G+ PD +++L + R +G ERYE ++FQ V + +++ D S W+IIDA
Sbjct: 121 DSGIPKPDMIIFLKF--DNVESRTSFGIERYETVDFQNNVMVYFKKLINDKSLYWEIIDA 178
Query: 226 CQSIEDVEKQLKEI 239
++I D+ ++ ++
Sbjct: 179 SKNINDIHDEITKL 192
>gi|429861336|gb|ELA36027.1| thymidylate kinase [Colletotrichum gloeosporioides Nara gc5]
Length = 261
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 131/225 (58%), Gaps = 26/225 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V EGLDR GKT+Q L L LG + RFPDRT+ G MI YL + +
Sbjct: 28 TRGAFIVFEGLDRSGKTTQVKLLEQRLVELGRKTKAMRFPDRTSPTGNMIDQYLKSNLEM 87
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
+DH IHLLFSANRWE +++ L +GTT++ DRY SG+ +S+AK +++ W +APE
Sbjct: 88 EDHVIHLLFSANRWEAVENIKSLLASGTTVLCDRYYLSGIVYSAAKQNPSLNLHWARAPE 147
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-------------- 215
+GL PD L+LD+ A ERGG+GGE YE EFQ +V + + L
Sbjct: 148 LGLPRPDLTLFLDLDESVAKERGGWGGEVYEKAEFQGRVRELFWGLHRGRIGPDGTLGEE 207
Query: 216 --RDSSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
D+ ++ ++DA S+E+V +++ V ++ A +KG+
Sbjct: 208 DREDADFRQEKEDLVVVDAGASVEEVAEEIWTKVGPRLEAVEKGE 252
>gi|444518590|gb|ELV12253.1| Thymidylate kinase [Tupaia chinensis]
Length = 183
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 94 RTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVA 153
R+T +G+++SAYL +S ++DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVA
Sbjct: 16 RSTEIGRLLSAYLEKRSEVEDHSVHLLFSANRWERVPLIKEKLSQGVTLVVDRYAFSGVA 75
Query: 154 FSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
F+SAK +EWCK P++GL PD VL+L + AA RG +G ERYE FQ +V Q +
Sbjct: 76 FTSAKENFSLEWCKQPDVGLPKPDLVLFLQLQLADAAARGQFGRERYESGPFQERVLQRF 135
Query: 213 -QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLWS 258
Q++ D+S WK++DA +SIEDV ++++ ++ ++ +P S LW+
Sbjct: 136 HQLMEDTSVTWKVVDASRSIEDVHQEIR-VLSEEAIHTAAQRPLSELWT 183
>gi|366995629|ref|XP_003677578.1| hypothetical protein NCAS_0G03390 [Naumovozyma castellii CBS 4309]
gi|342303447|emb|CCC71226.1| hypothetical protein NCAS_0G03390 [Naumovozyma castellii CBS 4309]
Length = 214
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 142/215 (66%), Gaps = 15/215 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+Q S L L+ + +L +FPDR+T++G++I+ YL++++ +L
Sbjct: 3 RGRLILIEGLDRTGKTTQTSILTDRLK---PNAQLIKFPDRSTTIGKLINQYLTDKNFNL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
+ ++HLLFSANRWE ++ L GT +I+DRY YSG+A+S+AK G+D++WC P+
Sbjct: 60 PNQSVHLLFSANRWEVAENIKETLLNGTNVILDRYVYSGIAYSAAKDVDGMDLQWCLNPD 119
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC-------YQMLRDSSWKI 222
GLL PD L+L AER G+G ERYE+++FQ+KV + ++ ++ K+
Sbjct: 120 KGLLKPDLTLFLTNESNDDAERDGFGEERYENVQFQKKVKKQFYAAFTEFETPNSNTLKL 179
Query: 223 IDAC-QSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+D +SIE+V +++ ++V ++ ++ + FS
Sbjct: 180 VDVTNKSIEEVSEEIWKLVQPILSNKEENQEFSFF 214
>gi|302685604|ref|XP_003032482.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
gi|300106176|gb|EFI97579.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
Length = 221
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 114/216 (52%), Gaps = 55/216 (25%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+ +RGA +V+EGLDR GK++Q ++L L G VEL +FPDRTT++G+MI AYL
Sbjct: 1 MPTRGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNI 60
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS--------------- 155
+DDH +HLL+SANRWE S + L GTT+I DRY++SG+AFS
Sbjct: 61 EMDDHVVHLLYSANRWELASRISTLLTEGTTIICDRYAFSGIAFSASKVASTSASTTVTS 120
Query: 156 ----------------------------------SAKGIDIE------WCKAPEIGLLAP 175
+AK D WC+AP+IGL AP
Sbjct: 121 TSSSTSTTAAPPTSTGSSTCGSSPTPAKTKDTCPTAKTTDTSPLLPYAWCRAPDIGLPAP 180
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC 211
D L+ DI PE A RGGYG ERYE + QR+V +
Sbjct: 181 DVTLFFDIAPEAARARGGYGEERYEREDVQRRVMEV 216
>gi|194211528|ref|XP_001497832.2| PREDICTED: thymidylate kinase-like [Equus caballus]
Length = 218
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 123/169 (72%), Gaps = 5/169 (2%)
Query: 93 DRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGV 152
+R+T +G+++S+YL ++ +++H++HLLFSANRWE+ +++ KL G TLIVDRY++SGV
Sbjct: 50 ERSTDIGKLLSSYLEKKNEMENHSVHLLFSANRWEQVPLIKEKLSQGVTLIVDRYAFSGV 109
Query: 153 AFSSAKG-IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC 211
A++SAK ++WCK P++GL PD V++L + +AA RG +G ERYE+ FQ V+Q
Sbjct: 110 AYTSAKADFSLDWCKQPDVGLPKPDLVVFLQLQLAEAAMRGEFGRERYENRTFQESVSQR 169
Query: 212 Y-QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+ Q++ D++ WK++DA QSIEDV K+++E+ D + A + +P LW
Sbjct: 170 FHQLMGDTTLNWKMVDASQSIEDVHKEIRELSEDTIQAAAQ-RPLGELW 217
>gi|260943900|ref|XP_002616248.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
gi|238849897|gb|EEQ39361.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
Length = 208
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 13/209 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GK++Q L S L+ +L++FPDR+T VG++I+ YL N S L
Sbjct: 2 RGRLILIEGLDRSGKSTQAENLASALDA-----QLYKFPDRSTPVGKLINEYLVNSSFDL 56
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI--DIEWCKAPEI 170
D HLLFSANRWE MEA L G +++DRY YSG+A+S AK D EW +P+
Sbjct: 57 SDEAAHLLFSANRWEVAHEMEATLLRGQNIVLDRYIYSGIAYSLAKSSLNDYEWLYSPDK 116
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDAC 226
GL PD L+L I E+ + R G+G ERYE FQ KV QC+ + +DSS +I++
Sbjct: 117 GLPKPDLTLFLTIDLEELSRRKGWGDERYEKSAFQAKVKQCFMQILDPEKDSSVEIVNVD 176
Query: 227 Q-SIEDVEKQLKEIVLDQVTACKKGKPFS 254
SIE V+ +L EI+ ++ KP +
Sbjct: 177 NLSIEQVKAKLMEIIKERKVDQTTEKPLA 205
>gi|307188610|gb|EFN73327.1| Thymidylate kinase [Camponotus floridanus]
Length = 209
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
I RGAL+VLEG DR GK++Q L++ L L E FP+R T VG ++ ++LS +
Sbjct: 2 ISKRGALIVLEGCDRAGKSTQMKMLINALNDLRIPAENIAFPNRKTPVGSILDSFLSKKI 61
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPE 169
++ T HLLFSANRWE + ME L +G TLIVDRY+ SG +++A G + WC+ P+
Sbjct: 62 NVPPETAHLLFSANRWECKEDMEKTLLSGVTLIVDRYAASGAVYTAANTGRSLNWCQQPD 121
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
+GL PD V++L + + +R +G ER+EH EFQ++V Y+ LRD +W I+A Q
Sbjct: 122 LGLPKPDCVMFLKVSKRQQEQRSDWGKERFEHDEFQQRVNANYEKLRDDTWITINADQDE 181
Query: 230 EDVEKQLKEIVL 241
V ++ + L
Sbjct: 182 SAVHSEILRMAL 193
>gi|449017488|dbj|BAM80890.1| dTMP kinase [Cyanidioschyzon merolae strain 10D]
Length = 211
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG DR GK++Q + L ++ E L LW FP+R ++ G+++ YLS +
Sbjct: 4 TRGTLIAFEGGDRAGKSTQAKQALQWIRETLREPAVLWHFPNRHSATGRLLDTYLSGSTE 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEI 170
L HLLF+ANRWE+ + L +G+ +I+DRY+YSGVAFS +A+G+D EWC A +
Sbjct: 64 LTGQVAHLLFAANRWERVEELWQLLDSGSHVILDRYAYSGVAFSVAARGLDPEWCLAADR 123
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY--QMLRDSSWKIIDACQS 228
GL +PD VL+LD+ P+ A++RG +G ERYE L Q++V Q + ++ + +W I A Q
Sbjct: 124 GLPSPDLVLFLDLDPQLASKRGNFGEERYEQLVIQQRVRQFFLDRLFQSENWVRISAEQP 183
Query: 229 IEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+ V+ Q + + + + + P LLW
Sbjct: 184 PDQVQLQCRRAITEMLPRVRS-LPLKLLW 211
>gi|350416175|ref|XP_003490864.1| PREDICTED: thymidylate kinase-like [Bombus impatiens]
Length = 215
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 127/205 (61%), Gaps = 2/205 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGALVVLEG DR GK++Q L+ L+ VE FPDRTT+ G++I+ YLS + +
Sbjct: 5 RGALVVLEGCDRAGKSTQAKLLVHALKQRDIPVEQRAFPDRTTATGEIINNYLSKKLNFS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPEIGL 172
T H+LFSANRWE + + L +GTT+++DRY+ SG A+++A G ++WCKAP+ GL
Sbjct: 65 LETAHMLFSANRWECKDEILRSLYSGTTVVIDRYAGSGAAYTAATTGRCLDWCKAPDKGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
+PD V++L++ E R +G ERYE+ E Q VA Y+ + D +W II+A +
Sbjct: 125 PSPDVVIFLNVSKETQCSRSNWGDERYENNEIQSHVASNYRKIMDQTWYIINADDDKSKI 184
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLW 257
Q+ + +LD + K P S L+
Sbjct: 185 HSQILQKILDVIDQVKD-LPVSKLY 208
>gi|68067163|ref|XP_675552.1| thymidylate kinase [Plasmodium berghei strain ANKA]
gi|56494802|emb|CAH95718.1| thymidylate kinase, putative [Plasmodium berghei]
Length = 218
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +V EG+DR GK++Q L+ +L+ V+ FP+R T++G++I+ YL +S
Sbjct: 14 KGNFIVFEGVDRSGKSTQSKLLVEHLKNNNIQVQYLCFPNRETTIGKIIANYLKMESTFS 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+ TIHLLFSANRWE ++ L G +I DRY+YSGVA+SS A + EWC P+ GL
Sbjct: 74 NETIHLLFSANRWEMMDQIKNLLINGIWVICDRYAYSGVAYSSGALKLPKEWCMNPDKGL 133
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKIIDACQSIED 231
+ PD+V YL++PP A R YG E YE E Q+++ + Y+ + W IDA +SI++
Sbjct: 134 IKPDAVCYLNVPPTYAKNRSEYGKEIYEKFEIQKRIYEAYEHFSNEDYWINIDATKSIQE 193
Query: 232 VEKQLKEIVLDQVTACKKGKPFSLLWS 258
+ + E + ++ K K LWS
Sbjct: 194 IHNTIVEEISKMCSS--KKKQLEYLWS 218
>gi|221062039|ref|XP_002262589.1| thymidylate kinase [Plasmodium knowlesi strain H]
gi|193811739|emb|CAQ42467.1| thymidylate kinase, putative [Plasmodium knowlesi strain H]
Length = 219
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 8/223 (3%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
M+S +S +G +V EGLDR GK++Q L+ +L V FP+R T G
Sbjct: 1 MDSMNSSTNDGTKKKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTG 60
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AK 158
Q+I+ YL Q+ + + TIHLLFSANRWE ++ L G ++ DRY+YSGVA+SS A
Sbjct: 61 QIIAKYLKMQNDMTNETIHLLFSANRWELMGEIKRLLSKGVWVVCDRYAYSGVAYSSGAL 120
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RD 217
+ WC P+ GL+ PD V YL++PP A +R YG E YE +E Q+++ + Y+ ++
Sbjct: 121 KLSKTWCMNPDQGLIKPDVVFYLNVPPNYAQQRSEYGEEIYEKVEVQKRIYEAYKNFSQE 180
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACK--KGKPFSLLWS 258
W +D ++I D+ + V++++T + +PF+ LWS
Sbjct: 181 DYWINLDGTKNINDIHQD----VVNEITKLEPVHEEPFTFLWS 219
>gi|332022461|gb|EGI62769.1| Thymidylate kinase [Acromyrmex echinatior]
Length = 208
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q L++ L L + FP+R T VG +++++LS + ++
Sbjct: 4 RGALIVLEGCDRAGKSTQVKMLMNALNDLRIPAKARAFPNRKTPVGTILNSFLSKEINMP 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
HLLFSANRWE + ME L++GTTL++DRY+ SG +++A G + WC+ ++GL
Sbjct: 64 PEAAHLLFSANRWECKEDMEKTLRSGTTLVIDRYAASGTVYTAANTGRSLSWCQQADLGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
PD V++L + ++ RG +G ER+EH EFQ++V Y+ LRD +W II+A Q V
Sbjct: 124 PKPDCVVFLKVSKQQQELRGDWGKERFEHDEFQQRVNANYEKLRDDTWVIINADQDESAV 183
Query: 233 EKQLKEIVL 241
++ + L
Sbjct: 184 HAEILQKTL 192
>gi|172986|gb|AAA35158.1| thymidylate kinase [Saccharomyces cerevisiae]
gi|190409534|gb|EDV12799.1| thymidylate kinase [Saccharomyces cerevisiae RM11-1a]
gi|207343848|gb|EDZ71181.1| YJR057Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273082|gb|EEU08037.1| Cdc8p [Saccharomyces cerevisiae JAY291]
Length = 216
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ S L
Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSFQL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 181 IVDVTNKDIQEV 192
>gi|259147521|emb|CAY80772.1| Cdc8p [Saccharomyces cerevisiae EC1118]
gi|323308467|gb|EGA61712.1| Cdc8p [Saccharomyces cerevisiae FostersO]
gi|323336951|gb|EGA78208.1| Cdc8p [Saccharomyces cerevisiae Vin13]
gi|365764715|gb|EHN06236.1| Cdc8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ S L
Sbjct: 3 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSFQL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 60 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 119
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 120 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 179
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 180 IVDVTNKDIQEV 191
>gi|328776703|ref|XP_624530.3| PREDICTED: thymidylate kinase-like [Apis mellifera]
Length = 214
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q L++ L L VEL FP+RTT++G++I+ +L+ ++ L
Sbjct: 5 RGALIVLEGCDRAGKSTQAKMLITALNNLNIPVELHSFPNRTTTIGEIINNFLTKKTELP 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI-DIEWCKAPEIGL 172
TIHLLFSANRWE + + L GTTLI+DRY+ SG A+++A ++ WC+ P+ GL
Sbjct: 65 PETIHLLFSANRWECKDEILKTLYKGTTLIIDRYAASGAAYTAATTGKNLNWCREPDSGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
+PD V+YL I + + R +G ER+E++EFQ VA Y+ L D +W +I+A +
Sbjct: 125 PSPDLVIYLSISKKSQSLRSNWGDERFENVEFQELVASNYEKLIDKTWYVINADDDKSVI 184
Query: 233 EKQLKEIVLDQVTACK 248
Q+ E V+D + K
Sbjct: 185 HSQILEKVIDTIKNVK 200
>gi|402074607|gb|EJT70116.1| thymidylate kinase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 249
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 31/217 (14%)
Query: 66 CGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANR 125
GKT+Q L LG V++ RFPDRTT +G+MI YL +Q +DDH IHLLFSANR
Sbjct: 24 SGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGEMIDGYLKSQVDMDDHVIHLLFSANR 83
Query: 126 WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAPEIGLLAPDSVLYLD 182
WE + + L +GTT++ DRY +SG+ +S+AKG + + W +APE+GL PD VL+LD
Sbjct: 84 WEAVKTITSLLASGTTVVCDRYYHSGIVYSAAKGNPALTLPWARAPEVGLPRPDLVLFLD 143
Query: 183 IPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--------------------------- 215
+ +A RGG+GGE YE QR+V + + L
Sbjct: 144 LDEGQARARGGWGGEAYERAGMQRRVRELFWGLSMGRVELSGEGASPQTVAAVVSELRFR 203
Query: 216 -RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
+ ++DA S+EDV +++ ++V +V A ++G+
Sbjct: 204 QEEEDLHVVDASPSVEDVAEEIWKVVRPRVEAVERGE 240
>gi|410969809|ref|XP_003991384.1| PREDICTED: uncharacterized protein LOC101097578 [Felis catus]
Length = 357
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 120/168 (71%), Gaps = 5/168 (2%)
Query: 94 RTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVA 153
R+T +G+++S+YL +S ++DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVA
Sbjct: 190 RSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKKKLSQGITLVVDRYAFSGVA 249
Query: 154 FSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQ-RKVAQC 211
F+SAK ++WCK P++GL PD V++L + +AA RG +G ERYE+ FQ R + +
Sbjct: 250 FTSAKENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAATRGEFGRERYENGNFQERALRRF 309
Query: 212 YQMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+Q++ D + WK++DA +SIEDV K++ + +D + A + +P LW
Sbjct: 310 HQLMADETLNWKMVDASKSIEDVHKEIHALSVDTIRAVTQ-RPLGELW 356
>gi|6322517|ref|NP_012591.1| Cdc8p [Saccharomyces cerevisiae S288c]
gi|1170719|sp|P00572.2|KTHY_YEAST RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|3318768|pdb|2TMK|A Chain A, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
Deoxythymidine Monophosphate (Azt-Mp)
gi|3318769|pdb|2TMK|B Chain B, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
Deoxythymidine Monophosphate (Azt-Mp)
gi|3318847|pdb|1TMK|A Chain A, Yeast Thymidylate Kinase Complexed With Thymidine
Monophosphate (Dtmp)
gi|3318848|pdb|1TMK|B Chain B, Yeast Thymidylate Kinase Complexed With Thymidine
Monophosphate (Dtmp)
gi|4558230|pdb|3TMK|A Chain A, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558231|pdb|3TMK|B Chain B, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558232|pdb|3TMK|C Chain C, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558233|pdb|3TMK|D Chain D, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558234|pdb|3TMK|E Chain E, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558235|pdb|3TMK|F Chain F, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558236|pdb|3TMK|G Chain G, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558237|pdb|3TMK|H Chain H, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|172971|gb|AAB05644.1| thymidylate kinase [Saccharomyces cerevisiae]
gi|1015725|emb|CAA89585.1| CDC8 [Saccharomyces cerevisiae]
gi|1019679|gb|AAB39283.1| ORF YJR057w [Saccharomyces cerevisiae]
gi|151945125|gb|EDN63376.1| thymidylate kinase [Saccharomyces cerevisiae YJM789]
gi|285812946|tpg|DAA08844.1| TPA: Cdc8p [Saccharomyces cerevisiae S288c]
gi|349579242|dbj|GAA24405.1| K7_Cdc8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 216
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ S L
Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSFQL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 181 IVDVTNKGIQEV 192
>gi|392298482|gb|EIW09579.1| Cdc8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 216
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T G +I+ YL++ S L
Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRTGGLINEYLTDDSFQL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 181 IVDVTNKDIQEV 192
>gi|145503822|ref|XP_001437883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405044|emb|CAK70486.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 127/192 (66%), Gaps = 6/192 (3%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ RG +VLEGLD+CGK++Q L L+ + +FPDR+TS+G +IS YL +
Sbjct: 4 NRRGLFIVLEGLDKCGKSTQTELLSEALDA-----KKMQFPDRSTSMGLIISDYLKGKRD 58
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
++D IHLLFSANRWE ++ + L G ++ DRY+YSGVAFSSAKG+ I+WCK + G
Sbjct: 59 INDQVIHLLFSANRWEAQNTIIETLNKGINIVCDRYAYSGVAFSSAKGLPIQWCKQCDSG 118
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIE 230
L PD V+YL P ++ +RG +G ERYE EFQ++V + + +M ++ + II A Q+ E
Sbjct: 119 LPKPDLVIYLRAPIKQLKDRGDFGAERYEKQEFQQQVQEVFDKMAQEEQFNIISAIQTKE 178
Query: 231 DVEKQLKEIVLD 242
++ Q+ E++ D
Sbjct: 179 EIFSQIMELIND 190
>gi|323304253|gb|EGA58027.1| Cdc8p [Saccharomyces cerevisiae FostersB]
Length = 215
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T G +I+ YL++ S L
Sbjct: 3 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRXGGLINEYLTDDSFQL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 60 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 119
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 120 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 179
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 180 IVDVTNKDIQEV 191
>gi|171204|gb|AAA34486.1| CDC8 gene [Saccharomyces cerevisiae]
Length = 216
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ + L
Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDTFQL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 181 IVDVTNKGIQEV 192
>gi|389586600|dbj|GAB69329.1| thymidylate kinase, partial [Plasmodium cynomolgi strain B]
Length = 219
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 8/223 (3%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
M+S++S +G +V EGLDR GK++Q L+ +L V FP+R T G
Sbjct: 1 MDSTNSTTNDGTKKKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNMEVNHLCFPNRETPTG 60
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AK 158
Q+I+ YL QS++ + TIHLLFSANRWE ++ L G ++ DRY+YSGVA+S+ A
Sbjct: 61 QIIAKYLKMQSNMTNETIHLLFSANRWELMGEIKRLLAKGVWVVCDRYAYSGVAYSAGAL 120
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RD 217
+ WC P+ GL+ PD V YL++PP A R YG E YE +E Q+++ + Y+ ++
Sbjct: 121 KLPKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRSEYGEEIYEKVEVQKRIYETYKNFSQE 180
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACKK--GKPFSLLWS 258
W +D ++I+D+ + V+ ++T + + F+ LWS
Sbjct: 181 DYWINLDGTKNIDDIHQD----VVSEITKLETVHEELFTFLWS 219
>gi|156096007|ref|XP_001614038.1| thymidylate kinase [Plasmodium vivax Sal-1]
gi|148802912|gb|EDL44311.1| thymidylate kinase, putative [Plasmodium vivax]
Length = 219
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 8/223 (3%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
M+S++S +G +V EGLDR GK++Q L+ +L V FP+R T G
Sbjct: 1 MDSTNSSTNDGTKKKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTG 60
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AK 158
Q+I+ YL QS + + TIHLLFSANRWE ++ L +G ++ DRY+YSGVA+S+ A
Sbjct: 61 QIIAKYLKMQSDMTNETIHLLFSANRWELMGEIKRLLASGVWVVCDRYAYSGVAYSAGAL 120
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RD 217
+ WC P+ GL+ PD V YL++PP A R YG E YE +E Q+++ + Y+ ++
Sbjct: 121 KLSKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRSEYGEEIYEKVEVQKRIYETYKNFSQE 180
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACK--KGKPFSLLWS 258
W +D ++I+D+ + V++++T + + F+ LWS
Sbjct: 181 DYWINLDGTKNIDDIHQD----VINEITKLEPVHEELFTFLWS 219
>gi|380030541|ref|XP_003698904.1| PREDICTED: thymidylate kinase-like [Apis florea]
Length = 214
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q L++ L VEL+ FP+RTT++G++I+ +L+ + L
Sbjct: 5 RGALIVLEGCDRAGKSTQAKMLITALNNRNIPVELYSFPNRTTAIGEIINNFLTKKIELP 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI-DIEWCKAPEIGL 172
TIHLLFSANRWE + + L+ GTTLI+DRY+ SG A+++A ++ WC+ P+ GL
Sbjct: 65 SETIHLLFSANRWECKDEILKTLQKGTTLIIDRYAASGAAYTAATTGKNLNWCREPDSGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
+PD V+YL I + + R +G ER+E++EFQ VA Y+ L D +W +I+A +
Sbjct: 125 PSPDLVIYLSISKKSQSLRSNWGDERFENVEFQELVASNYEKLIDKTWYVINADDDKSLI 184
Query: 233 EKQLKEIVLDQVTACK 248
Q+ E V+D + K
Sbjct: 185 HSQILEKVIDIIKNIK 200
>gi|441669653|ref|XP_003282020.2| PREDICTED: thymidylate kinase [Nomascus leucogenys]
Length = 169
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 117/167 (70%), Gaps = 5/167 (2%)
Query: 95 TTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF 154
+T +G+++S+YL +S ++DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF
Sbjct: 3 STEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAF 62
Query: 155 SSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY- 212
+ AK ++WCK P+ GL PD VL+L + AA+RG +G ERYE+ FQ + QC+
Sbjct: 63 TGAKENFSLDWCKQPDAGLPKPDLVLFLQLELADAAKRGAFGHERYENGAFQERALQCFH 122
Query: 213 QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
Q++RD++ WK++DA +SIE V + ++ + D + A + +P LW
Sbjct: 123 QLMRDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRAATE-RPLGELW 168
>gi|170582308|ref|XP_001896072.1| thymidylate kinase [Brugia malayi]
gi|158596802|gb|EDP35082.1| thymidylate kinase, putative [Brugia malayi]
Length = 213
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 9/201 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V EG DR GK+ Q +L+ ++ G V+L FPDR++ +G+ I YL + +D
Sbjct: 6 RGAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLKKEVEMD 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID---IEWCKAPEI 170
HL+F+ANR +M KL GT L+VDRY+YSG+A++ AKG D +EW K ++
Sbjct: 66 PKEAHLVFAANRQALMPLMMKKLLKGTHLVVDRYAYSGIAYTLAKGADNITMEWAKLADM 125
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDACQ 227
G L PD V+Y ++ E+A +R G+G ER++ FQ KV++ + L D WK++DA
Sbjct: 126 GELRPDCVIYFNLSFEEAQKRSGFGDERFDFGNFQGKVSKVMEQLADEDRDLWKVVDASL 185
Query: 228 SIEDVEKQLKEIV---LDQVT 245
++E++ + + +V LD V+
Sbjct: 186 TVEEISENVWNLVAPILDNVS 206
>gi|322795260|gb|EFZ18065.1| hypothetical protein SINV_01400 [Solenopsis invicta]
Length = 208
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEG DR GK++Q L++ L L + FP+R T VG +++++LS + ++
Sbjct: 4 RGAFIVLEGCDRAGKSTQVKMLINALNDLQIPAKARGFPNRKTPVGTILNSFLSKEINVP 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
T HLLFSANRWE + ME L +G +L++DRY+ SG +++A G + WC+ P++GL
Sbjct: 64 PETAHLLFSANRWECKEDMEKTLLSGVSLVMDRYAASGAVYTAANTGRSLNWCQQPDLGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
L PD V++L + + R +G ER+EH EFQ++V Y+ L+D SW +I+A Q V
Sbjct: 124 LKPDCVMFLKVSKRQQELRSDWGKERFEHDEFQQRVDANYEELKDDSWFVINADQDESTV 183
Query: 233 EKQLKEIVL 241
++ + L
Sbjct: 184 HAEILQKTL 192
>gi|365759898|gb|EHN01658.1| Cdc8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 218
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 16/216 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L + EL +FP+R+T +G +I+ YL++ S L
Sbjct: 3 RGKLILIEGLDRTGKTTQCNILYKKLL---PNCELIKFPERSTRIGGLINQYLTDDSLQL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE M+ L G +++DRY YSGVA+S+AK G+D+ WC P+
Sbjct: 60 SDQAIHLLFSANRWEMVDGMKKALLEGKNIVMDRYVYSGVAYSAAKKTDGMDLNWCLQPD 119
Query: 170 IGLLAPDSVLYLDIPPEKA-AERGGYGGERYEHLEFQRKVAQCY------QMLR-DSSWK 221
IGLL PD L+L I + A + G+G ERYE L+FQ++V + +M R D S K
Sbjct: 120 IGLLKPDLTLFLSIQDVNSNAGKDGFGEERYETLKFQKQVKHTFITLLENEMKRGDESIK 179
Query: 222 IID-ACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
I+D + I +VE + EI +T FS
Sbjct: 180 IVDVGNKGIHEVEALIWEIAEPALTTHIDHDKFSFF 215
>gi|156544086|ref|XP_001605460.1| PREDICTED: thymidylate kinase-like [Nasonia vitripennis]
Length = 209
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +VLEGLDR GK++Q S ++ L+ VE FPDR+T++G +I+ YL+ + L
Sbjct: 2 ARGAFIVLEGLDRAGKSTQVSMIVEALKERNVPVERRVFPDRSTAIGGIINDYLAKKIEL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDR-YSYSGVAFSSAKGIDIEWCKAPEIG 171
+HLLFSANRWE + + L+ GTTLIVDR + ++ G + WC +P+ G
Sbjct: 62 APEAVHLLFSANRWECKDGILETLEKGTTLIVDRYAASGAAYSAATTGRPLSWCTSPDQG 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS-SWKIIDACQSIE 230
L APD VLYLD+ P+ +R +G ER+E E QRKVA+ ++ L +S +W ++A
Sbjct: 122 LPAPDLVLYLDVTPDTQQQRSNWGEERFERAETQRKVAENFRKLSESGNWAFVEAGLDKL 181
Query: 231 DVEKQLKEIVLDQVTACKKGKPFSLLWS 258
+V ++L + VLD + CK KP L+
Sbjct: 182 EVHQKLLQKVLDLLEGCKD-KPIGKLYE 208
>gi|336260748|ref|XP_003345167.1| hypothetical protein SMAC_09145 [Sordaria macrospora k-hell]
gi|380088368|emb|CCC13744.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 279
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EGLDR GKT+Q L G V+ RFPDRTT +GQMI +YL +Q+ ++
Sbjct: 26 RGALIVVEGLDRSGKTTQVKLLEERFRKEGKRVKTMRFPDRTTPIGQMIDSYLKSQAQME 85
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
DH IHLLFSANRWE + +L GTTLI+DRY YSG+ +S+AK + + W +APEI
Sbjct: 86 DHVIHLLFSANRWEAVKTITTELSLGTTLILDRYYYSGIVYSAAKQNPSLSLSWARAPEI 145
Query: 171 GLLAPDSVLYLDIPPEKA 188
GL PD VL+LD+ E+A
Sbjct: 146 GLPRPDLVLFLDLDEEQA 163
>gi|448089627|ref|XP_004196858.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
gi|448093932|ref|XP_004197889.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
gi|359378280|emb|CCE84539.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
gi|359379311|emb|CCE83508.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 127/202 (62%), Gaps = 19/202 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+++EGLDR GK++Q + L L + EL +FPDR+T VG +I+ YL+ ++ L
Sbjct: 6 RGKLILIEGLDRSGKSTQSALLQRQLP----NCELLKFPDRSTRVGSLINDYLTGKTQLS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI----------DIE 163
D + HLLFSANRWE +E KL G +++DRY YSG+A+S AK + +E
Sbjct: 62 DQSAHLLFSANRWELAKSIEEKLLQGKFIVLDRYIYSGIAYSLAKSLSNDESSPEMKSVE 121
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRD---SS 219
W +P+ GL PD L+L +P E+ A R G+G ERYE +EFQ+KV +C+ ++L+D
Sbjct: 122 WLYSPDKGLPKPDLTLFLSLPTEELARRKGWGEERYEDVEFQKKVRECFLRVLQDIPQDH 181
Query: 220 WKIIDACQ-SIEDVEKQLKEIV 240
+II+ SIE V+ + E++
Sbjct: 182 LEIINVSDLSIEQVKSHIWEVI 203
>gi|401837645|gb|EJT41548.1| CDC8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 253
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 16/216 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L + EL +FP+R+T +G +I+ YL++ S L
Sbjct: 38 RGKLILIEGLDRTGKTTQCNILYKKLL---PNCELIKFPERSTRIGGLINQYLTDDSLQL 94
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE M+ L G +++DRY YSGVA+S+AK G+D+ WC P+
Sbjct: 95 SDQAIHLLFSANRWEMVDGMKKALLEGKNIVMDRYVYSGVAYSAAKKTDGMDLNWCLQPD 154
Query: 170 IGLLAPDSVLYLDIPPEKA-AERGGYGGERYEHLEFQRKVAQCY------QMLR-DSSWK 221
IGLL PD L+L I + A + G+G ERYE L+FQ++V + +M R D S K
Sbjct: 155 IGLLKPDLTLFLSIQDVNSNAGKDGFGEERYETLKFQKQVKHTFITLLENEMKRGDESIK 214
Query: 222 IID-ACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
I+D + I +VE + EI +T FS
Sbjct: 215 IVDVGNRGIHEVEALIWEIAEPVLTTHIDHDKFSFF 250
>gi|402592409|gb|EJW86338.1| thymidylate kinase [Wuchereria bancrofti]
Length = 213
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 127/202 (62%), Gaps = 11/202 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V EG DR GK+ Q +L+ ++ G V+L FPDR++ +G+ I YL + +D
Sbjct: 6 RGAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLKKEVEMD 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID---IEWCKAPEI 170
HL+F+ANR +M KL GT L+VDRY+YSG+A++ AKG D +EW K ++
Sbjct: 66 PKEAHLVFAANRQALMPLMMKKLLKGTHLVVDRYAYSGIAYTLAKGADNITMEWAKLADM 125
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDAC 226
G L PD V+Y ++ E+A +R G+G ER++ +FQ KV++ + L RD WKI+DA
Sbjct: 126 GELRPDCVIYFNLSFEEAQKRSGFGDERFDFGDFQGKVSKIMEQLAAEDRD-LWKIVDAS 184
Query: 227 QSIEDVEKQLKEI---VLDQVT 245
++E++ + + ++ VLD V+
Sbjct: 185 LTVEEISENVWKLVAPVLDNVS 206
>gi|225711618|gb|ACO11655.1| Thymidylate kinase [Caligus rogercresseyi]
Length = 216
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 14/209 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQSHL 112
RGA +VLEG DR GKT+ RL E +RFPDR + + G +I+++L+ + +
Sbjct: 8 RGAFIVLEGCDRSGKTTIAKRLSD-----SPGFEFFRFPDRDSPLTGSLINSFLTGGTPM 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIG 171
IHLLFSANRWEK M + L AG +I DRY+YSG+A+SS+K G+D +WC P+ G
Sbjct: 63 SSQLIHLLFSANRWEKVPSMLSVLSAGKNIICDRYAYSGIAYSSSKPGMDFDWCAGPDNG 122
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ---MLRDSSWKIIDA-CQ 227
L PD V++LD+ PE+A +RGG+G E YE + FQ KV Y + + WK I +
Sbjct: 123 LPTPDLVIFLDVSPEQALKRGGFGEEVYEKVGFQAKVRDIYTTKLVGKGGEWKWISTDGK 182
Query: 228 SIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+++D +K +V D+V + + +P +L+
Sbjct: 183 TLDDTYCAVKTLV-DEVLS--QDRPHNLI 208
>gi|413926758|gb|AFW66690.1| hypothetical protein ZEAMMB73_755612 [Zea mays]
Length = 379
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 85/94 (90%)
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
R+++E+KL +GTTLIVDRYSYSGVAFS+AKG+DIEWCKAPE GL+APD V+YLD+ PEKA
Sbjct: 109 RALVESKLLSGTTLIVDRYSYSGVAFSAAKGLDIEWCKAPENGLIAPDLVIYLDVQPEKA 168
Query: 189 AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
AERGGYGGERYE +EFQ+KVA+ Y LRDS+WK
Sbjct: 169 AERGGYGGERYEKIEFQKKVAEHYHSLRDSTWKF 202
>gi|383865532|ref|XP_003708227.1| PREDICTED: putative thymidylate kinase 251L-like [Megachile
rotundata]
Length = 212
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 120/205 (58%), Gaps = 2/205 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EG DR GK++Q L+ L+ E FPDRTT G +I+ +L N+ L
Sbjct: 5 RGALIVFEGCDRAGKSTQVKMLIEALKKRNIPTEARAFPDRTTPTGTLINNFLCNKLELP 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPEIGL 172
T HLLFSANRWE + + L+ G T+I+DRY+ SG A+++A G + WCK + GL
Sbjct: 65 PETTHLLFSANRWEVKEDIIKSLQNGVTVIIDRYAGSGAAYTAALSGKCLTWCKEADKGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDV 232
+PD V+ L + + R +G ERYE+ EFQ++VA Y+ L + +W IDA ++
Sbjct: 125 PSPDLVILLKVSEKTQCSRSNWGSERYENSEFQKRVALNYEKLIEKTWSSIDANGETLEI 184
Query: 233 EKQLKEIVLDQVTACKKGKPFSLLW 257
Q+ + VL+ V K P +L+
Sbjct: 185 HSQVLKQVLNTVQKV-KNLPIGMLY 208
>gi|354474224|ref|XP_003499331.1| PREDICTED: thymidylate kinase-like [Cricetulus griseus]
Length = 295
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 93 DRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGV 152
+R+T +G+++S+YL ++ L+DH++HLLFSANRWE+ +++AKL G TL++DRY++SGV
Sbjct: 127 ERSTEIGKLLSSYLEKKTDLEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGV 186
Query: 153 AFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC 211
AF+SAK ++WCK P++GL PD +L+L + AA RG +G ERYE FQ +V C
Sbjct: 187 AFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAAARGEFGLERYETGTFQEQVLLC 246
Query: 212 YQML---RDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+Q L ++ +WK++DA +SIEDV ++++ + D + + + P LW
Sbjct: 247 FQQLMKDKNLNWKVVDASKSIEDVHEEIRVLSEDAIRSAAQS-PLEELW 294
>gi|18640403|ref|NP_570559.1| CMLV169 [Camelpox virus]
gi|18483079|gb|AAL73876.1|AF438165_166 thymidylate kinase [Camelpox virus M-96]
Length = 227
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 131/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + L ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESI--LANTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYEFGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ ++ + G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLESGSKEINK--NVGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|56404626|sp|Q8QQ21.1|KTHY_CAMPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56404634|sp|Q8V2K9.2|KTHY_CAMPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|19718140|gb|AAG37665.1| CMP166R [Camelpox virus CMS]
Length = 204
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 131/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + L ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESI--LANTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYEFGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ ++ + G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLESGSKEINKN--VGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|254585257|ref|XP_002498196.1| ZYRO0G04554p [Zygosaccharomyces rouxii]
gi|238941090|emb|CAR29263.1| ZYRO0G04554p [Zygosaccharomyces rouxii]
Length = 218
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 20/205 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-H 111
+RG L+++EGLDR GK++Q S LL + L + EL +FPDRTT +GQ+I+ YL+++S
Sbjct: 2 ARGLLILVEGLDRTGKSTQASILL---DKLKPNAELVKFPDRTTPIGQLINRYLTDESFQ 58
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAP 168
L D +IHLLFSANRWE ++ L +G +I+DRY YSG+A+S AKGI D +WC P
Sbjct: 59 LPDQSIHLLFSANRWELSQSLQNTLLSGKHVIMDRYVYSGIAYSLAKGIDGMDFDWCIQP 118
Query: 169 EIGLLAPDSVLYL-DIPPEKAAERGGYGGERYEHLEFQRKV-AQCYQMLR---------D 217
+ GL+ PD + +L + A R G+G ERYE L FQ KV Q Y++L D
Sbjct: 119 DKGLIKPDLLFFLSNRDSLDTASREGFGQERYESLAFQEKVRDQFYRVLERLENYSQGTD 178
Query: 218 SS-WKIIDAC-QSIEDVEKQLKEIV 240
S+ ++I+ QSI+ V + EIV
Sbjct: 179 SNRLQMINVTNQSIDQVSITIWEIV 203
>gi|323098770|gb|ADX23007.1| thymidylate kinase [Monkeypox virus]
Length = 204
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PXPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|17975072|ref|NP_536586.1| A49R [Monkeypox virus Zaire-96-I-16]
gi|17529939|gb|AAL40617.1|AF380138_159 A49R [Monkeypox virus Zaire-96-I-16]
gi|68449041|gb|AAY97163.1| thymidylate kinase [Monkeypox virus]
gi|68449243|gb|AAY97364.1| thymidylate kinase [Monkeypox virus]
gi|323098573|gb|ADX22811.1| thymidylate kinase [Monkeypox virus]
gi|451327848|gb|AGF36720.1| thymidylate kinase [Monkeypox virus]
gi|451328056|gb|AGF36927.1| thymidylate kinase [Monkeypox virus]
Length = 204
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|51342318|gb|AAU01362.1| MPXV-WRAIR152 [Monkeypox virus]
gi|58220622|gb|AAW67910.1| MPXV-SL-152 [Monkeypox virus]
gi|59858958|gb|AAX09253.1| MPXV-COP-152 [Monkeypox virus]
gi|68448840|gb|AAY96963.1| thymidylate kinase [Monkeypox virus]
gi|68449442|gb|AAY97562.1| thymidylate kinase [Monkeypox virus]
gi|68449642|gb|AAY97761.1| thymidylate kinase [Monkeypox virus]
Length = 204
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NIGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|325514185|gb|ADZ24179.1| thymidylate kinase [Cowpox virus]
Length = 204
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRYS+SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYSFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAMHTVT--GPVGQLW 203
>gi|30519543|emb|CAD90718.1| A51R protein [Cowpox virus]
gi|325557910|gb|ADZ29292.1| thymidylate kinase [Cowpox virus]
gi|325558771|gb|ADZ30149.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|56713570|gb|AAW23610.1| thymidylate kinase [Vaccinia virus]
gi|56713854|gb|AAW23892.1| thymidylate kinase [Vaccinia virus]
Length = 204
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + L ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESI--LSNTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|56404583|sp|Q80DS7.2|KTHY_CWPXG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 204
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|22164753|ref|NP_671666.1| EVM147 [Ectromelia virus]
gi|22123894|gb|AAM92452.1|AF523264_148 EVM147 [Ectromelia virus]
gi|383866872|gb|AFH54715.1| thymidylate kinase [Ectromelia virus]
Length = 227
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAMHTVT--GPVGQLW 226
>gi|414885205|tpg|DAA61219.1| TPA: hypothetical protein ZEAMMB73_575031 [Zea mays]
Length = 423
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 92/116 (79%), Gaps = 6/116 (5%)
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
+++ME+KL +GTTLIVDRYSYSGVAFS+AK +DIEWCKAPE GL+AP+ V+YLD+ P+K
Sbjct: 233 KALMESKLLSGTTLIVDRYSYSGVAFSAAKVLDIEWCKAPENGLIAPNLVIYLDVQPKKV 292
Query: 189 AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQV 244
AERGGYGGERYE +EFQ+KVA+ Y LRDS+WK+ QL +IV++ V
Sbjct: 293 AERGGYGGERYEKIEFQKKVAEHYHSLRDSTWKLYKGLVG------QLMDIVVNAV 342
>gi|347838598|emb|CCD53170.1| similar to thymidylate kinase [Botryotinia fuckeliana]
Length = 221
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 124/216 (57%), Gaps = 38/216 (17%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRG+ +++EGLDR GKT+Q +L L G +V+L RFPD++
Sbjct: 19 SRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDQS----------------- 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GID------IEWC 165
IHLLFSANRWEK + + G T++ DRY YSG+ ++S+K ID +EWC
Sbjct: 62 ----IHLLFSANRWEKAQEIRDLIAQGYTIVCDRYYYSGMIYTSSKYSIDSPNHLSLEWC 117
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS------ 219
K PEIGL PD V++LD+ PE+A +RGGYG E+YE E QR+V + L++S+
Sbjct: 118 KNPEIGLPMPDRVIFLDLEPEEAEKRGGYGDEKYETREMQRRVRNGFLSLQNSAVPGFEQ 177
Query: 220 ----WKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
K IDA +++V +++ V D V +KG+
Sbjct: 178 EQRIMKAIDAGDGLDEVAEKIWHAVKDIVEQIEKGE 213
>gi|56404611|sp|Q8JL72.2|KTHY_ECTVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 204
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAMHTVT--GPVGQLW 203
>gi|325558124|gb|ADZ29505.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESMPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|325558986|gb|ADZ30363.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFAPFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|325559198|gb|ADZ30574.1| thymidylate kinase [Cowpox virus]
Length = 280
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 78 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 135
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 136 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 195
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 196 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 252
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 253 EDVKKELIKNIVIEAIHTVT--GPVGQLW 279
>gi|303389072|ref|XP_003072769.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
gi|303301911|gb|ADM11409.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
Length = 191
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++G +V EGLDR GKT+ L L +G V RFP+R+ ++G++I AYL + +L
Sbjct: 2 TQGKFIVFEGLDRSGKTTIVDSLYDSLSSMG-DVRKMRFPNRSGNIGKVIDAYLRKEINL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
++ TIHLLFS +R+E++S +E +L+ + L+ DRYS SG ++S AKG+D++WC + GL
Sbjct: 61 ENETIHLLFSGDRYEQKSTIE-ELRKSSILLCDRYSLSGASYSVAKGLDLDWCVMVDSGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQSIE 230
PD +++DIP ++ + R G+G E ++HL F KV Y++L R+ + I+D I
Sbjct: 120 PKPDMTIFIDIPLDEISRRKGFGNEVHDHLPFLEKVLSAYKVLLKREKNVLIVDGTFPIS 179
Query: 231 DVEKQLKEIVLD 242
+ + +K +L+
Sbjct: 180 SIVEIVKRKILE 191
>gi|209882114|ref|XP_002142494.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
gi|209558100|gb|EEA08145.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
Length = 208
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EG DR GKT Q ++L + + L FPDR+T++G ++ YL N ++
Sbjct: 3 RGALIVFEGTDRSGKTLQSNKLAEKFKNENINCILIGFPDRSTNIGYLLDLYLRNCENMR 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL 172
HLLFSANRWE ++ L++G T+I DRY++SGVA+S A DIEWC PE GL
Sbjct: 63 PEVSHLLFSANRWEYFEKIKTYLESGVTVICDRYAFSGVAYSVGALKKDIEWCMMPEKGL 122
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
++PD V +LD + +R G+G ERY+ Q V+ Y Q + WK+IDA + D
Sbjct: 123 ISPDIVFFLDADVQIRVDRSGFGDERYDTESTQNSVSTIYSQFKKYDYWKVIDASKDPND 182
Query: 232 VEKQL 236
V + +
Sbjct: 183 VFENI 187
>gi|66275971|ref|YP_233056.1| thymidylate kinase [Vaccinia virus]
gi|29692280|gb|AAO89453.1| thymidylate kinase [Vaccinia virus WR]
gi|37551619|gb|AAQ93271.1| thymidylate kinase [Vaccinia virus]
gi|88854248|gb|ABD52666.1| thymidylate kinase TMK [Vaccinia virus]
gi|90819834|gb|ABD98644.1| VACV-DUKE-182 [Vaccinia virus]
Length = 227
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|56404550|sp|Q76RA8.1|KTHY_VACCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56404558|sp|Q77TG7.1|KTHY_VACCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56405064|sp|P68693.1|KTHY_VACCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56405065|sp|Q80HT9.2|KTHY_VACCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|209870290|pdb|2V54|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Tdp
gi|209870291|pdb|2V54|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Tdp
gi|209870294|pdb|2W0S|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Brivudin-5'-Monophosphate
gi|209870295|pdb|2W0S|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Brivudin-5'-Monophosphate
gi|62232|emb|CAA34345.1| unnamed protein product [Vaccinia virus]
gi|222737|dbj|BAA01822.1| 23.2K protein [Vaccinia virus]
gi|335528|gb|AAA48180.1| putative A48R [Vaccinia virus Copenhagen]
gi|2772800|gb|AAB96539.1| thymidylate kinase [Vaccinia virus]
gi|6969848|gb|AAF34060.1| TA59R [Vaccinia virus Tian Tan]
gi|38349040|gb|AAR18016.1| thymidylate kinase [Vaccinia virus]
gi|47088489|gb|AAT10559.1| thymidylate kinase [Vaccinia virus]
gi|111184359|gb|ABH08279.1| HSPV170 [Horsepox virus]
gi|373447361|gb|AEY72747.1| thymidylate kinase [Vaccinia virus]
gi|373447600|gb|AEY72985.1| thymidylate kinase [Vaccinia virus]
gi|373447836|gb|AEY73220.1| thymidylate kinase [Vaccinia virus]
gi|373448079|gb|AEY73462.1| thymidylate kinase [Vaccinia virus]
gi|373448321|gb|AEY73703.1| thymidylate kinase [Vaccinia virus]
gi|373448551|gb|AEY73932.1| thymidylate kinase [Vaccinia virus]
gi|373448792|gb|AEY74172.1| thymidylate kinase [Vaccinia virus]
gi|373449034|gb|AEY74413.1| thymidylate kinase [Vaccinia virus]
gi|373449263|gb|AEY74641.1| thymidylate kinase [Vaccinia virus]
gi|373449504|gb|AEY74881.1| thymidylate kinase [Vaccinia virus]
gi|373449745|gb|AEY75121.1| thymidylate kinase [Vaccinia virus]
gi|439966017|gb|AGB75891.1| thymidylate kinase [Vaccinia virus]
Length = 204
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|9627681|ref|NP_042204.1| hypothetical protein VARVgp160 [Variola virus]
gi|462468|sp|P33803.1|KTHY_VAR67 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|439072|gb|AAA60903.1| homolog of vaccinia virus CDS A48R (thymidylate kinase); putative
[Variola major virus]
gi|457051|emb|CAA49101.1| J2R [Variola virus]
gi|516401|emb|CAA47543.1| thymidylate kinase [Variola virus]
gi|5830722|emb|CAB54761.1| K2R protein [Variola minor virus]
gi|94483807|gb|ABF22924.1| thymidylate kinase [Variola virus]
gi|94484011|gb|ABF23127.1| thymidylate kinase [Variola virus]
gi|94484214|gb|ABF23329.1| thymidylate kinase [Variola virus]
gi|94484421|gb|ABF23535.1| thymidylate kinase [Variola virus]
gi|94484623|gb|ABF23736.1| thymidylate kinase [Variola virus]
gi|94484821|gb|ABF23933.1| thymidylate kinase [Variola virus]
gi|94485019|gb|ABF24130.1| thymidylate kinase [Variola virus]
gi|94485217|gb|ABF24327.1| thymidylate kinase [Variola virus]
gi|94485419|gb|ABF24528.1| thymidylate kinase [Variola virus]
gi|94485622|gb|ABF24730.1| thymidylate kinase [Variola virus]
gi|94485824|gb|ABF24931.1| thymidylate kinase [Variola virus]
gi|94486028|gb|ABF25134.1| thymidylate kinase [Variola virus]
gi|94486229|gb|ABF25334.1| thymidylate kinase [Variola virus]
gi|94486432|gb|ABF25536.1| thymidylate kinase [Variola virus]
gi|94486635|gb|ABF25738.1| thymidylate kinase [Variola virus]
gi|94486837|gb|ABF25939.1| thymidylate kinase [Variola virus]
gi|94487040|gb|ABF26141.1| thymidylate kinase [Variola virus]
gi|94487242|gb|ABF26342.1| thymidylate kinase [Variola virus]
gi|94487445|gb|ABF26544.1| thymidylate kinase [Variola virus]
gi|94487648|gb|ABF26746.1| thymidylate kinase [Variola virus]
gi|94487849|gb|ABF26946.1| thymidylate kinase [Variola virus]
gi|94488053|gb|ABF27149.1| thymidylate kinase [Variola virus]
gi|94488656|gb|ABF27749.1| thymidylate kinase [Variola virus]
gi|94488857|gb|ABF27949.1| thymidylate kinase [Variola virus]
gi|94489057|gb|ABF28148.1| thymidylate kinase [Variola virus]
gi|94489257|gb|ABF28347.1| thymidylate kinase [Variola virus]
gi|94489458|gb|ABF28547.1| thymidylate kinase [Variola virus]
gi|94489859|gb|ABF28946.1| thymidylate kinase [Variola virus]
gi|94490268|gb|ABF29353.1| thymidylate kinase [Variola virus]
gi|109724203|gb|ABG43329.1| thymidylate kinase [Variola virus]
gi|109724407|gb|ABG43532.1| thymidylate kinase [Variola virus]
gi|109724610|gb|ABG43734.1| thymidylate kinase [Variola virus]
gi|109724814|gb|ABG43937.1| thymidylate kinase [Variola virus]
gi|109725017|gb|ABG44139.1| thymidylate kinase [Variola virus]
gi|109725222|gb|ABG44343.1| thymidylate kinase [Variola virus]
gi|109725427|gb|ABG44547.1| thymidylate kinase [Variola virus]
gi|109725629|gb|ABG44748.1| thymidylate kinase [Variola virus]
gi|109725833|gb|ABG44951.1| thymidylate kinase [Variola virus]
gi|109726036|gb|ABG45153.1| thymidylate kinase [Variola virus]
gi|109726442|gb|ABG45557.1| thymidylate kinase [Variola virus]
gi|109726646|gb|ABG45760.1| thymidylate kinase [Variola virus]
gi|745282|prf||2015436GF J2R gene
Length = 205
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPT--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQS 228
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGEDIHWQII-SSEF 176
Query: 229 IEDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EEDVKKELIKNIVIEAIHTVT--GPVGQLW 204
>gi|90660407|gb|ABD97521.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|160858058|emb|CAM58346.1| thymidylate kinase [Vaccinia virus Ankara]
gi|325558340|gb|ADZ29720.1| thymidylate kinase [Cowpox virus]
Length = 204
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|62288454|gb|AAX78482.1| unknown [synthetic construct]
Length = 253
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 51 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 108
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 109 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 168
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 169 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 225
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 226 EDVKKELIKNIVIEAIHTVT--GPVGQLW 252
>gi|94490065|gb|ABF29151.1| thymidylate kinase [Variola virus]
Length = 205
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCINIMESIPT--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQS 228
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGEDIHWQII-SSEF 176
Query: 229 IEDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EEDVKKELIKNIVIEAIHTVT--GPVGQLW 204
>gi|20178547|ref|NP_619968.1| CPXV186 protein [Cowpox virus]
gi|20153165|gb|AAM13626.1|AF482758_177 CPXV186 protein [Cowpox virus]
gi|325559411|gb|ADZ30786.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAIHTVT--GPVGQLW 226
>gi|56404530|sp|Q6RZD4.1|KTHY_RABPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|44971520|gb|AAS49870.1| RPXV157 [Rabbitpox virus]
gi|167412703|gb|ABZ80137.1| thymidylate kinase [Vaccinia virus GLV-1h68]
Length = 204
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|94489660|gb|ABF28748.1| thymidylate kinase [Variola virus]
Length = 205
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPT--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQS 228
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGEDIHWQII-SSKF 176
Query: 229 IEDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EEDVKKELIKNIVIEAIHTVT--GPVGQLW 204
>gi|56404622|sp|Q8QMQ7.2|KTHY_CWPXB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 204
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|290462111|gb|ADD24103.1| Thymidylate kinase [Lepeophtheirus salmonis]
Length = 214
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQSHL 112
RGA +VLEG DR GKT+ RL + E RFPDR + + G +I+++L+ +
Sbjct: 8 RGAFIVLEGCDRSGKTTLAKRL-----SQDPNFEFLRFPDRDSKLTGSLINSFLTGAKEM 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIG 171
IHLLFSANRWEK + + L +G +I DRY+YSG+A+SS+K G+ +WC + G
Sbjct: 63 CGQLIHLLFSANRWEKVPQILSTLDSGKHIICDRYAYSGIAYSSSKPGMSFDWCANSDNG 122
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ---MLRDSSWKIIDA-CQ 227
L PD +L+LD+ PE+A +RGG+G E YE +EFQ KV Y + WK + +
Sbjct: 123 LPTPDLILFLDVSPEEALKRGGFGDEVYEKVEFQAKVRDIYSKRLFGKGGEWKWVSTDGK 182
Query: 228 SIEDVEKQLKEIVLDQVTACKKGKPFSL 255
S++++ +L+ ++ D + + P L
Sbjct: 183 SLDELYTELRTLIEDTLVKERDSPPSPL 210
>gi|399217927|emb|CCF74814.1| unnamed protein product [Babesia microti strain RI]
Length = 197
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 8/191 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPD------RTTSVGQMISAYLS 107
RG +V+EGLDR GK++ C L LE G V+L FP R +++G ++S YL
Sbjct: 6 RGLFIVIEGLDRSGKSTVCKGLKQLLESEGKKVKLIGFPSNNFYIGRDSTIGNILSEYLK 65
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCK 166
++ L T HLLFSA+RW+ ++ ++ L G LI DRY+YSGVA+S A+G++I W K
Sbjct: 66 CKNDLLPQTAHLLFSADRWQAQNDIKQSLSEGFYLICDRYAYSGVAYSVGAQGLNISWAK 125
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDS-SWKIIDA 225
+ GL++PD YL+I A+R G+G ER E + V YQM ++S +W ++DA
Sbjct: 126 HSDTGLVSPDLTFYLNIKSNIIAKRSGFGNERLEKINLMENVELAYQMFQNSPNWILVDA 185
Query: 226 CQSIEDVEKQL 236
Q IE ++ L
Sbjct: 186 NQDIEAIKNLL 196
>gi|50288903|ref|XP_446881.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526190|emb|CAG59814.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 107/164 (65%), Gaps = 5/164 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+Q L L G G V +FP+R + +GQ+I+ YL+N+ L
Sbjct: 5 RGKLILIEGLDRTGKTTQVDALAERLRGCGLKVVAAKFPNRESEIGQLINRYLTNRDFQL 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D +HLLFSANRWE ++ +L G +++DRY +SGVA+S+AK G+D++WC P+
Sbjct: 65 PDQAVHLLFSANRWEYIEELKQQLNDGYCVVLDRYVFSGVAYSAAKGTPGMDLQWCLQPD 124
Query: 170 IGLLAPDSVLYL-DIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
GLL PD L+L + E A R G+G ERYE +FQ KV Q +
Sbjct: 125 KGLLKPDLTLFLTNEDRESIANRAGFGEERYEDSDFQLKVKQKF 168
>gi|365985734|ref|XP_003669699.1| hypothetical protein NDAI_0D01420 [Naumovozyma dairenensis CBS 421]
gi|343768468|emb|CCD24456.1| hypothetical protein NDAI_0D01420 [Naumovozyma dairenensis CBS 421]
Length = 217
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 108/163 (66%), Gaps = 7/163 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+Q + LL L +L +FPDRTT +G++I YL+++ HL
Sbjct: 3 RGKLILVEGLDRTGKTTQTTLLLKKLSS--QDAKLIKFPDRTTPIGKLIDNYLTDKEFHL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D +HLLFSANRWE ++ L G +I+DRY YSG+A+S+AK G+D++WC P+
Sbjct: 61 PDQAVHLLFSANRWEVADSIKQLLLEGKIVILDRYVYSGIAYSAAKNIPGMDLKWCLQPD 120
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
GLL PD ++L ++ G+G ERYE+++FQ++V +
Sbjct: 121 KGLLKPDLTIFL-TNDNDNDDKKGFGEERYENVQFQKEVKNQF 162
>gi|88900791|gb|ABD57703.1| VACV203 [Vaccinia virus]
Length = 204
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ + +
Sbjct: 3 RGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTYN 60
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 61 DHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGLP 120
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + + E
Sbjct: 121 KPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFEE 177
Query: 231 DVEKQL-KEIVLDQVTACKKGKPFSLLW 257
DV+K+L K IV++ + P LW
Sbjct: 178 DVKKELIKNIVIEAIHTVT--GPVGQLW 203
>gi|325558554|gb|ADZ29933.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 25 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 82
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 83 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 142
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 143 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFD 199
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 200 EDVKKELIKNIVIEAMHTVI--GPVGQLW 226
>gi|312067737|ref|XP_003136884.1| thymidylate kinase [Loa loa]
gi|307767957|gb|EFO27191.1| thymidylate kinase [Loa loa]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +V EG DR GK+ Q +L+ ++ G +V+L FPDR++ +G+ I YL + ++
Sbjct: 6 RGAFIVFEGCDRVGKSLQSRKLVERIKATGGNVDLISFPDRSSDLGKFIDRYLKKEVEME 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID---IEWCKAPEI 170
HL+F+ANR +M +L GT L+VDRY+YSG+A++ AKG D +EW K ++
Sbjct: 66 PKEAHLVFAANRQALMPLMVKELLKGTHLVVDRYAYSGIAYTLAKGADNVTMEWAKLADM 125
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDAC 226
G L PD V+Y ++ E+A +R G+G ER++ FQ KV + L RD WK++DA
Sbjct: 126 GELKPDCVIYFNLSFEEAQKRSGFGDERFDSGSFQGKVNDIMEKLAAEDRD-LWKVVDAS 184
Query: 227 QSIEDVEKQLKEIV---LDQVT 245
IE + + + ++V LD V+
Sbjct: 185 LPIEVISENVWKLVSPILDNVS 206
>gi|367003062|ref|XP_003686265.1| hypothetical protein TPHA_0F03510 [Tetrapisispora phaffii CBS 4417]
gi|357524565|emb|CCE63831.1| hypothetical protein TPHA_0F03510 [Tetrapisispora phaffii CBS 4417]
Length = 224
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLG--HSVELWRFPDRTTSVGQMISAYLSNQSH 111
RG L++LEGLDR GKT+QC RL+ L+ V+ ++FP+R +G++I+ YL+N S+
Sbjct: 4 RGKLILLEGLDRTGKTTQCERLVDILKETMKIEKVKQFKFPNRENEIGKLINGYLTNSSN 63
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKA 167
L D IHLLFSANRWE + ++ L G +I+DRY YSGVA+S AK G+DI+WC
Sbjct: 64 SLSDQAIHLLFSANRWESINEIKNLLNEGYYVILDRYVYSGVAYSLAKEVEGMDIDWCLN 123
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
+ GL+ PD ++L + +R G+G ERYE + FQ KV + +
Sbjct: 124 CDKGLIKPDLTIFL-TNDKTNKDREGFGDERYEKIAFQLKVKEKF 167
>gi|307202789|gb|EFN82074.1| Thymidylate kinase [Harpegnathos saltator]
Length = 209
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q L + L + FP+R T +G +++ +LS + ++
Sbjct: 5 RGALIVLEGCDRAGKSTQVKLLTNALNERSIPTKASAFPNRNTPIGGLLNGFLSKEINIP 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
HLLFSANRWE + +E L +GTTL++DRY+ SG A+++A G + WCK P++GL
Sbjct: 65 PEAAHLLFSANRWECKEDIEKMLLSGTTLVIDRYASSGTAYTAANTGRCLNWCKQPDLGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
PD V+ L + + R +G ER+E + Q +V+ Y+ L+D +W +DA Q++
Sbjct: 125 PKPDCVMLLKVSKHQQELRNNWGEERFEQNDLQVRVSANYEKLKDDTWMTVDADQNV 181
>gi|440300143|gb|ELP92632.1| thymidylate kinase, putative [Entamoeba invadens IP1]
Length = 208
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 122/197 (61%), Gaps = 11/197 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRG LVVLEG+D+CGK+S + L G FPDR+T+VG++I +L + +L
Sbjct: 2 SRGILVVLEGIDQCGKSSASVSVCQKLNSEGIKSVTQPFPDRSTAVGKLIDDFLHGK-NL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+HLL+SANRWE ++E + G T++ DRY++SG+ +S A G+D EWCK P+ GL
Sbjct: 61 PQQAVHLLYSANRWEVAKIIEKNINEGVTVVCDRYAFSGIVYSIANGLDPEWCKIPDSGL 120
Query: 173 LAPDSVLYLDIPPEKAA-ERGGYGGERYEHLEFQRKVAQCYQMLRDS-SWKIIDACQS-- 228
PD V +L++ ++A R +RYE++EFQ+KV ++ +++ W +DA Q+
Sbjct: 121 PKPDIVCFLELSLDEADRRRKSLVADRYENVEFQKKVKSEFEKMKNELLWTSVDANQNRK 180
Query: 229 --IED----VEKQLKEI 239
+ED ++K +KE+
Sbjct: 181 KVVEDICNIIKKNIKEM 197
>gi|156842253|ref|XP_001644495.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156115139|gb|EDO16637.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 217
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 112/169 (66%), Gaps = 11/169 (6%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-H 111
SRG L+++EGLDR GK++QC L L G L +FP R T +GQ+I+ YL+++S
Sbjct: 2 SRGRLILIEGLDRTGKSTQCDILCEKLNGT-----LMKFPQRETKIGQLINNYLTDKSFK 56
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAP 168
+ D +IHLLFSANRWE +++ +L G +I+DRY YSG+A+SSAK G+DI+WC
Sbjct: 57 MPDQSIHLLFSANRWEMSEIIQTELNNGRDVILDRYVYSGIAYSSAKHISGMDIDWCYQC 116
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVA-QCYQMLR 216
+ GL+ PD ++L +R G+G ERYE++EFQ+ V + Y++ +
Sbjct: 117 DKGLIRPDITVFL-TNDSNNDDREGFGEERYENIEFQKVVKLKFYEIFK 164
>gi|94488256|gb|ABF27351.1| thymidylate kinase [Variola virus]
gi|94488456|gb|ABF27550.1| thymidylate kinase [Variola virus]
gi|109726240|gb|ABG45356.1| thymidylate kinase [Variola virus]
Length = 205
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 12/208 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
GAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ + +D
Sbjct: 4 GALIVFEGLDKSGKTTQCMNIMESIPT--NTIKYLNFPQRSTVTGKMIDDYLTRKKTYND 61
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
H ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 62 HIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGLPK 121
Query: 175 PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQSIE 230
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + + E
Sbjct: 122 PDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGEDIHWQII-SSEFEE 178
Query: 231 DVEKQL-KEIVLDQVTACKKGKPFSLLW 257
DV+K+L K IV++ + P LW
Sbjct: 179 DVKKELIKNIVIEAIHTVT--GPVGQLW 204
>gi|254570737|ref|XP_002492478.1| Thymidylate and uridylate kinase [Komagataella pastoris GS115]
gi|238032276|emb|CAY70299.1| Thymidylate and uridylate kinase [Komagataella pastoris GS115]
gi|328353509|emb|CCA39907.1| dTMP kinase [Komagataella pastoris CBS 7435]
Length = 202
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 10/192 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
R L+V+EGLDR GK++Q ++L L G L +FP+R T +G++++ YL++ S+ +
Sbjct: 2 RAPLIVIEGLDRTGKSTQTAKLCHRLNGF-----LVKFPNRETPIGKLLNQYLTDASNPM 56
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
HLLFSANRWE +E L GT +++DRY YSGVA+S AKG+DIEWC AP+ GL
Sbjct: 57 PLEVAHLLFSANRWEMVKNIEDLLSKGTPVVMDRYVYSGVAYSMAKGLDIEWCLAPDKGL 116
Query: 173 LAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRD--SSWK-IIDACQS 228
PD ++L + ++R G+G ERYE Q V +++LR WK II +
Sbjct: 117 PKPDVTIFLKANDLDSISQREGFGEERYEVASLQTSVRNNFEILRSRYDEWKVIIIDGKD 176
Query: 229 IEDVEKQLKEIV 240
I+ V + + E+V
Sbjct: 177 IDQVHEHIWELV 188
>gi|167393075|ref|XP_001740414.1| thymidylate kinase [Entamoeba dispar SAW760]
gi|165895464|gb|EDR23144.1| thymidylate kinase, putative [Entamoeba dispar SAW760]
Length = 210
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+VLEG+D+ GK+S R+ LE G FPDR+T +G++I +L + +L
Sbjct: 4 NRGLLIVLEGIDQSGKSSAAQRVCEMLEKKGIQSIKQPFPDRSTDIGKLIDEFLHGK-NL 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+HLL+SANRWE ++ L+ G T+I DRY++SG+ +S A G+D WC + + GL
Sbjct: 63 PQQVVHLLYSANRWEVAQKIKETLEKGITIICDRYAFSGIVYSIANGLDERWCNSADSGL 122
Query: 173 LAPDSVLYLDIPPEKAAE-RGGYGGERYEHLEFQRKVAQCYQMLRDS-SWKIIDACQSIE 230
PD V +L++ E A + R +RYE+++FQ KV Y+ +DS W IDA QS E
Sbjct: 123 PKPDIVFFLELSLEDAEQRRKTMKTDRYENIKFQSKVKCEYEKFKDSMKWTCIDARQSKE 182
Query: 231 DVEKQLKEIVLDQV 244
+V ++ I+ Q+
Sbjct: 183 EVALEITSIIEQQL 196
>gi|67477898|ref|XP_654383.1| Thymidylate kinase [Entamoeba histolytica HM-1:IMSS]
gi|56471425|gb|EAL48995.1| Thymidylate kinase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710743|gb|EMD49762.1| thymidylate kinase, putative [Entamoeba histolytica KU27]
Length = 210
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+VLEG+D+ GK+S R+ LE G FPDR+T +G++I +L + +L
Sbjct: 4 NRGLLIVLEGIDQSGKSSATQRVCELLEKKGIQSVKQPFPDRSTDIGKLIDEFLHGK-NL 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+HLL+SANRWE ++ L+ G T+I DRY++SG+ +S A G+D +WC + + GL
Sbjct: 63 PQQVVHLLYSANRWEVAQNIKETLEKGITVICDRYAFSGIVYSIANGLDEKWCNSADCGL 122
Query: 173 LAPDSVLYLDIPPEKAAE-RGGYGGERYEHLEFQRKVAQCYQMLRDS-SWKIIDACQSIE 230
PD V +L++ E A + R +RYE+ +FQ KV Y+ +DS W IDA QS E
Sbjct: 123 PKPDIVFFLELSLEDAEKRRKTMKTDRYENTKFQSKVKCEYEKFKDSMKWTCIDASQSKE 182
Query: 231 DVEKQLKEIVLDQV 244
+V ++ I+ Q+
Sbjct: 183 EVALEITSIIEQQL 196
>gi|71030486|ref|XP_764885.1| thymidylate kinase [Theileria parva strain Muguga]
gi|68351841|gb|EAN32602.1| thymidylate kinase, putative [Theileria parva]
Length = 213
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 13/214 (6%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
MES ++LR G L+V EG+DR GK++Q L L E+ FP +TT G
Sbjct: 1 MESETALR-------GKLIVFEGIDRSGKSTQIRLLSQKLSEENIKNEVLTFPYKTTPTG 53
Query: 100 QMISAYLSNQSH-LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SA 157
+++ +YL N+ + +HLLFSANRWE + + LK+GT +I DRY++SG+A+S A
Sbjct: 54 KLLRSYLGNRDESIPKQALHLLFSANRWEVMNRIIKLLKSGTHVITDRYAFSGIAYSVGA 113
Query: 158 KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
+G+D WC P+ G++ PD V Y+D+ PE ++ RG +G E YE+LE V + ++ +
Sbjct: 114 EGLDFNWCLIPDTGIVEPDIVFYMDLAPECSSARGNFGSEIYENLENMENVYEVFKRFGN 173
Query: 218 -SSWKIIDACQSIEDVEKQLKEI---VLDQVTAC 247
S W I A + + +++ I V++ C
Sbjct: 174 LSYWNNIKANHDRDQIHEKIYSITKKVIEPTNKC 207
>gi|444323131|ref|XP_004182206.1| hypothetical protein TBLA_0I00220 [Tetrapisispora blattae CBS 6284]
gi|387515253|emb|CCH62687.1| hypothetical protein TBLA_0I00220 [Tetrapisispora blattae CBS 6284]
Length = 242
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 115/184 (62%), Gaps = 15/184 (8%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSV------ELWRFPDRTTSVGQMISAYL 106
+RG L++ EGLDR GKT+Q LL YL G EL +FP+R+T +G++I+ YL
Sbjct: 2 TRGRLILFEGLDRTGKTTQSEALLKYLNLQGDQSSSSKRCELIKFPERSTPIGKLINNYL 61
Query: 107 SNQS-HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDI 162
++S L D +IHLLFS+NRWE +++ L+ G +++DRY +SG+A+S AK +D
Sbjct: 62 VDKSFKLPDQSIHLLFSSNRWELTEQIKSSLQKGNDVLLDRYVFSGIAYSLAKDTERMDF 121
Query: 163 EWCKAPEIGLLAPDSVLYL----DI-PPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
+WC +P+IGL+ PD ++L DI + R G+G ERYE +FQ KV + ++ +
Sbjct: 122 DWCLSPDIGLIKPDLTIFLTTDSDISTSNQINNRSGFGAERYEKSDFQLKVKAKFDIVFN 181
Query: 218 SSWK 221
+K
Sbjct: 182 YFFK 185
>gi|149246800|ref|XP_001527825.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239]
gi|146447779|gb|EDK42167.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239]
Length = 237
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 38/235 (16%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSV---------ELWRFPDRTTSVGQMISA 104
RG L+++EGLDR GK++Q S L+S LGH+ +L +FPDRTT +G++I+
Sbjct: 3 RGQLILIEGLDRSGKSTQASLLVS---KLGHASSSSSPPCSSKLLKFPDRTTPIGKLINE 59
Query: 105 YLSNQS-HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---- 159
YL+N+ LDD HLLF ANRWE + L G +++DRY YSG+A++ AK
Sbjct: 60 YLTNKEFQLDDQAAHLLFLANRWELNQEIHNLLNQGCFVVLDRYIYSGIAYTLAKNNLDD 119
Query: 160 ----------------IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLE 203
++W P+ GL PD ++L + E+ ++R G+G ERYE +
Sbjct: 120 SEANTSISRGKKSSNLASVDWLLGPDKGLPKPDLTMFLTLDLEEISKRKGWGNERYELQQ 179
Query: 204 FQRKVAQCY-QML---RDSSWKIIDACQ-SIEDVEKQLKEIVLDQVTACKKGKPF 253
FQ KV +C+ Q+L +D S +I+D + SIE+V QL ++++ KP
Sbjct: 180 FQAKVKRCFLQILNSNQDKSIEILDVGEKSIEEVTNQLWDVIVSHNANTLTEKPI 234
>gi|403213637|emb|CCK68139.1| hypothetical protein KNAG_0A04670 [Kazachstania naganishii CBS
8797]
Length = 208
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 125/196 (63%), Gaps = 13/196 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG L+++EGLDR GKT+Q LL+ L + EL +FP R T +G++I YL+++S+ L
Sbjct: 3 RGQLILIEGLDRTGKTTQTELLLN---NLSPNAELIKFPQRQTPIGKIIDRYLTDKSYEL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE +++ L +G +I+DRY +SGVA+S K G+DI WC +P+
Sbjct: 60 PDQAIHLLFSANRWELIDSIKSTLDSGKHVILDRYVFSGVAYSVGKNIPGMDIHWCVSPD 119
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQM----LRDSSWKIIDA 225
GL+ PD L+L + + R G+G ERYE + Q+KV + + + L D++ K ++
Sbjct: 120 KGLMRPDLTLFL-VNEMGSDSRAGFGEERYESVGMQQKVRKQFDLVLKELGDATVKTLNV 178
Query: 226 C-QSIEDVEKQLKEIV 240
++I++VE ++ V
Sbjct: 179 TGKTIDEVELMIRRQV 194
>gi|402466345|gb|EJW01855.1| thymidylate kinase [Edhazardia aedis USNM 41457]
Length = 199
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 123/195 (63%), Gaps = 11/195 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
G +V+EG+D+ GK++ C L+ L G +V L FP+R + G++I YL+ + L
Sbjct: 6 NGKFIVIEGIDKSGKSTLCKNLIEMLAHGTKQTVLLKSFPNRDSITGKVIDKYLNKKIQL 65
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ TIHLLFSANRWE+ + + LK +I DRY SG+A+++AKGI++EW KAP++GL
Sbjct: 66 NPQTIHLLFSANRWEEVQVYK-DLK-NKIIICDRYFLSGIAYTAAKGINLEWAKAPDMGL 123
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK-----IIDACQ 227
PD +++LDI + A+R GYG E+Y+ + +Q K CY +L+ ++ +IDA
Sbjct: 124 PVPDLIVFLDITAMETAKRSGYGDEKYDSICYQSK---CYDLLKKMVFEHPNGVVIDANI 180
Query: 228 SIEDVEKQLKEIVLD 242
+ + K++ ++LD
Sbjct: 181 KEDHLCKKVLNLILD 195
>gi|345107340|ref|YP_004821505.1| thymidylate kinase [Yoka poxvirus]
gi|344267414|gb|AEN03741.1| thymidylate kinase [Yoka poxvirus]
Length = 207
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 120/199 (60%), Gaps = 6/199 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RGA +V+EG+D+ GKT+QC ++ + + + FP R T G+MI+ YL+ +
Sbjct: 2 NRGAFIVIEGIDKSGKTTQCINAINDVSSINKQITYINFPQRNTISGKMINNYLTRKKTY 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ H I +LFS NRWE ++ +LK G ++I DRYS+SGVA+S+A G IE K+ E GL
Sbjct: 62 NSHIISMLFSENRWEFSQFIKDRLKNGISVISDRYSFSGVAYSAANGFSIEVSKSYESGL 121
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQS 228
PD V++LD + + G E YE +EFQ+KV ++ L +D +WK+I + +
Sbjct: 122 PKPDMVIFLDSGTTELEK--NIGEELYEEIEFQKKVLVEFKNLIKNEKDINWKVIPSDLT 179
Query: 229 IEDVEKQLKEIVLDQVTAC 247
++ ++ +K +V + + +
Sbjct: 180 YDEKKQLIKNLVFECINSV 198
>gi|255712129|ref|XP_002552347.1| KLTH0C02728p [Lachancea thermotolerans]
gi|238933726|emb|CAR21909.1| KLTH0C02728p [Lachancea thermotolerans CBS 6340]
Length = 214
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 108/163 (66%), Gaps = 9/163 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL- 112
RG L+++EGLDR GK++Q +L E LG +L +FPDR+T +G +I+ YL++ S L
Sbjct: 3 RGKLILIEGLDRTGKSTQAGKLT---ERLGPDSQLIKFPDRSTKIGGLINQYLTDPSFLL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
D IHLLFSANRWE ++A L G +++DRY YSGVA+S+AKG+ D+ WC +
Sbjct: 60 PDQAIHLLFSANRWEVAEEIKALLLEGRNVVLDRYVYSGVAYSAAKGVPGMDLRWCLQSD 119
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
+GLL PD L+L + + R G+G ERYE+ FQ+KV + +
Sbjct: 120 VGLLKPDLTLFL--TNQGSELRQGFGDERYENSAFQQKVREQF 160
>gi|363750532|ref|XP_003645483.1| hypothetical protein Ecym_3163 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889117|gb|AET38666.1| Hypothetical protein Ecym_3163 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 107/167 (64%), Gaps = 10/167 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GK++Q + LL L+ + +L +FPDRTT +G +I YL+ ++ L
Sbjct: 3 RGRLILIEGLDRTGKSTQATLLLQRLQP---NAQLIKFPDRTTPIGMLIDKYLTQETFEL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D HLLFSANRWE + ++ L GT +I+DRY YSG+A+S+AK G+D+ WC P+
Sbjct: 60 PDQAAHLLFSANRWELGARIKELLLIGTHVILDRYVYSGIAYSAAKNIPGMDLAWCFQPD 119
Query: 170 IGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQ 213
GL+ PD ++ + E R GYG ERYE +EFQR V +Q
Sbjct: 120 KGLVKPDLTIFFLHDEKHGHELENRSGYGNERYERVEFQRAVLAQFQ 166
>gi|237845145|ref|XP_002371870.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
gi|211969534|gb|EEB04730.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
gi|221480782|gb|EEE19211.1| thymidylate kinase, putative [Toxoplasma gondii GT1]
gi|221501447|gb|EEE27223.1| thymidylate kinase, putative [Toxoplasma gondii VEG]
Length = 273
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 126/244 (51%), Gaps = 49/244 (20%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG LVV EG+DR GK++Q L GH+ EL RFPDRTT +GQ++ +L+N S
Sbjct: 8 RGCLVVFEGIDRSGKSTQARLAYERLTKEGHAAELIRFPDRTTPIGQVLDRFLANASWSS 67
Query: 114 D---------HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS--------- 155
D HLLF+ANRWE ++ + L G T++VDRYS+SG+A++
Sbjct: 68 DGQHPQVPPPQLTHLLFAANRWEAQARILRALGEGRTVLVDRYSFSGIAYTVGAAPSVAE 127
Query: 156 ----------SAKG-------------------IDIEWCKAPEIGLLAPDSVLYLDIPPE 186
A G +D +C+ E GLLAPD+V +LD+ P+
Sbjct: 128 TEATRLRREAEASGDVEKTAEAVAASTAATGAPVDATFCRESERGLLAPDAVFFLDVAPQ 187
Query: 187 KAAERGGYGGERYEHLEFQRKVAQCYQMLRD-SSWKIIDACQ-SIEDVEKQLKEIVLDQV 244
+ +RGGYG E YE L Q +V Q Y+ + W+ I A SIE++ ++L E + +
Sbjct: 188 ETQKRGGYGDEVYEKLATQERVYQVYRQFDNLPYWRRIAASSLSIEELHEKLFEQLKSVI 247
Query: 245 TACK 248
A +
Sbjct: 248 EATQ 251
>gi|406604939|emb|CCH43612.1| hypothetical protein BN7_3165 [Wickerhamomyces ciferrii]
Length = 181
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 112/186 (60%), Gaps = 28/186 (15%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+++EGLDR GKT+Q RL+ L+ G VEL +FP
Sbjct: 2 SRGALILIEGLDRAGKTTQTERLVERLKKEGKDVELIKFP-------------------- 41
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
HLLFSANRWE ++++ KL G +++DRY YSGVA+++AKG+D +WC P+IGL
Sbjct: 42 ----AHLLFSANRWELANVIKDKLTQGKYIVLDRYVYSGVAYTAAKGLDHQWCLNPDIGL 97
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-RDSSWK-IIDACQSIE 230
PD L+L + ++ R G+G ERYE EFQ KV Q ++ +S+W II ++IE
Sbjct: 98 PKPDLTLFLKL--NDSSNREGFGDERYEVKEFQLKVRQQFEKFYNESNWNTIIVDGKNIE 155
Query: 231 DVEKQL 236
VE ++
Sbjct: 156 QVENEI 161
>gi|367015158|ref|XP_003682078.1| hypothetical protein TDEL_0F00560 [Torulaspora delbrueckii]
gi|359749740|emb|CCE92867.1| hypothetical protein TDEL_0F00560 [Torulaspora delbrueckii]
Length = 176
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 110/171 (64%), Gaps = 9/171 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+RG L+++EGLDR GKT+Q + LL + L + L +FPDR+T +GQ+I YL+++S
Sbjct: 2 TRGRLILIEGLDRTGKTTQSNILL---DKLKPNATLIKFPDRSTEIGQLIDKYLTDRSFV 58
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAP 168
L D +HLLFSANRWE + L AG +++DRY YSG+A+S+AKG+ D WC P
Sbjct: 59 LPDQAVHLLFSANRWEVAQSIRELLLAGKHVVLDRYVYSGIAYSAAKGVAGMDRNWCLQP 118
Query: 169 EIGLLAPDSVLYLDIPPE-KAAERGGYGGERYEHLEFQRKV-AQCYQMLRD 217
+ GLL PD ++L + R G+G ERYE EFQ++V Q Y++ D
Sbjct: 119 DKGLLKPDLTIFLTNANVCENQSRQGFGDERYEVSEFQQEVKKQFYKVFED 169
>gi|209732338|gb|ACI67038.1| Thymidylate kinase [Salmo salar]
gi|303659245|gb|ADM15955.1| Thymidylate kinase [Salmo salar]
Length = 120
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 87/105 (82%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D+ GKT+QC++L+ L+ G E+ +FP+RTT +GQ+I++YL N+S+L+
Sbjct: 5 RGALIVLEGVDKAGKTTQCNKLVQALQDSGQKAEMMKFPERTTKIGQLINSYLENKSNLE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
DHT+HLLFSANRWE +M+ KL+ G +L+VDRY++SGVAF+SA
Sbjct: 65 DHTVHLLFSANRWELMPLMKEKLEQGISLVVDRYAFSGVAFTSAN 109
>gi|402216300|gb|EJT96452.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Dacryopinax sp. DJM-731 SS1]
Length = 148
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IHLLFSANRWE + +E L+ G T++ DRY++SG FS+AKG+ +EWCKAP+ GL APD
Sbjct: 1 IHLLFSANRWELAASIERDLQEGITIVCDRYAFSGAVFSAAKGLPLEWCKAPDAGLPAPD 60
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQSIEDVEK 234
+VL+LDI PEKAAERGGYG ERYE E Q +V + +L + W +DA +S+E+V++
Sbjct: 61 AVLFLDISPEKAAERGGYGEERYEKREMQEQVRAQFAVLGKQVKGWTRVDAGRSVEEVQQ 120
Query: 235 QLKEIV 240
+ +V
Sbjct: 121 DISAVV 126
>gi|344230499|gb|EGV62384.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 216
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 19/202 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG L+++EGLDR GK++Q RL + + + +FPDR+T +G +I+ YL+++S L
Sbjct: 2 RGHLILIEGLDRSGKSTQVERLHTAIP----NSSTQKFPDRSTRIGAIINQYLTDESFVL 57
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---------IDIE 163
D +IHLLFSANRWE M L++GTT+I+DRY YSG+A+S AK +E
Sbjct: 58 PDQSIHLLFSANRWELIDSMSRALQSGTTVILDRYIYSGIAYSLAKSHFNHSDNQMASVE 117
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR----DSS 219
W +P+ GLL PD L+L + ++ R +G ERYE FQ V + L DSS
Sbjct: 118 WLYSPDKGLLKPDLTLFLTLNMDEIDTRADFGDERYEKRAFQEVVKDNFLRLLDPKVDSS 177
Query: 220 WKIIDAC-QSIEDVEKQLKEIV 240
ID QSI++V + + ++V
Sbjct: 178 IHFIDVNRQSIDEVGRTIWDVV 199
>gi|395851584|ref|XP_003798333.1| PREDICTED: thymidylate kinase [Otolemur garnettii]
Length = 197
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 20/208 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q RL+S L G EL RFP V Q ++ + S +
Sbjct: 5 RGALIVLEGVDRAGKSTQARRLVSALCSAGRRAELLRFP-VVIVVWQSLAGFEPASSGV- 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
W +++ KL G TLIVDRY++SGVAF+SAK ++WCK P++GL
Sbjct: 63 ----------CGW---PLIKEKLSQGVTLIVDRYAFSGVAFTSAKENFSLDWCKQPDVGL 109
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA RG +G ERYE FQ + QC+ Q++ D++ WKI+DA +SI
Sbjct: 110 PKPDLVLFLQLQLADAAVRGEFGQERYEDRPFQERALQCFHQLMADTTLNWKIVDASRSI 169
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
ED+ +L + D + + +P LW
Sbjct: 170 EDIHMELLALCEDVICTAAQ-RPLGELW 196
>gi|401826104|ref|XP_003887146.1| thymidylate kinase [Encephalitozoon hellem ATCC 50504]
gi|392998304|gb|AFM98165.1| thymidylate kinase [Encephalitozoon hellem ATCC 50504]
Length = 191
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 116/192 (60%), Gaps = 4/192 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
S G VV EGLDR GKT+ + L L + SV RFP+R +G+ I YL + L
Sbjct: 2 SEGKFVVFEGLDRSGKTTVVNSLYESLLPIA-SVSKVRFPNRNGCIGKTIDEYLQKKITL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
TIHLLF+A+R+E ++M+E L+ + ++ DRYS SGVA+S+AKG+D+ WC E L
Sbjct: 61 KSETIHLLFAADRYEHKAMIE-DLRKDSIILCDRYSMSGVAYSAAKGLDLNWCAMSESLL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQSIE 230
PD +++DIP ++ R G+G E ++++ F +KV YQ L + + I+D S+
Sbjct: 120 PKPDLTVFIDIPMDEICRRKGFGEEIFDNIAFLKKVRSAYQTLLKEEKNVLIVDGTLSVN 179
Query: 231 DVEKQLKEIVLD 242
++ K +K+ + +
Sbjct: 180 EIVKIVKKKIFE 191
>gi|159109111|ref|XP_001704822.1| CDC8 [Giardia lamblia ATCC 50803]
gi|157432895|gb|EDO77148.1| CDC8 [Giardia lamblia ATCC 50803]
Length = 254
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 114/198 (57%), Gaps = 7/198 (3%)
Query: 34 SCTPFRMESSS---SLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWR 90
+C P ++ S R G+ +RG VV+EGLDR GK + ++++ L G SV +
Sbjct: 8 NCQPSNLQGSEYPEGRRKGDNVTRGLFVVIEGLDRAGKDTMIGQVVALLRQAGESVVVQA 67
Query: 91 FPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYS 150
FPDRTT G ++ +L + L D H L++ NR E ++ L AGTT+I RY+YS
Sbjct: 68 FPDRTTKSGAVLDRFLQRELDLSDWDCHRLYAENRKELEEVLCNTLLAGTTVICSRYAYS 127
Query: 151 GVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQ 210
GVA+++AKG D+ C + GLL PD V++LD+ A R G+G ERYE +FQ KV
Sbjct: 128 GVAYTAAKGHDMRRCMEADKGLLRPDLVIFLDVDASAVAVRTGFGKERYETQDFQVKVYT 187
Query: 211 CYQMLRDSSWKIIDACQS 228
+Q L W+++ Q+
Sbjct: 188 AFQTL----WELLRNSQN 201
>gi|84995356|ref|XP_952400.1| thymidylate kinase [Theileria annulata strain Ankara]
gi|65302561|emb|CAI74668.1| thymidylate kinase, putative [Theileria annulata]
Length = 214
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 120/223 (53%), Gaps = 25/223 (11%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
MES + LR G L+V EG+DR GK++Q + L L E+ FP +TT G
Sbjct: 1 MESETVLR-------GKLIVFEGIDRSGKSTQINLLSQKLSEENIKNEVLSFPYKTTPTG 53
Query: 100 QMISAYLSNQSH-LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA- 157
+++ YL N+ + +HLLFSANRWE + + LK+GT +I DRY++SG+A+S
Sbjct: 54 KLLREYLRNRDESIPKQALHLLFSANRWEVMNRIIKLLKSGTHVITDRYAFSGIAYSVGA 113
Query: 158 -----------KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQR 206
+G+D WC P+ G++ PD V Y+D+ PE ++ RG +G E YE+LE
Sbjct: 114 EVRLLFYQVFPQGLDFNWCLIPDTGIVEPDVVFYMDLAPECSSARGNFGSEIYENLEHME 173
Query: 207 KVAQCYQMLRD-SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
V + ++ + S W II A D +KQ+ + C+
Sbjct: 174 NVYEVFKRFGNLSYWNIIKA----HDDQKQIHHKIYSIAKKCQ 212
>gi|354545174|emb|CCE41901.1| hypothetical protein CPAR2_804510 [Candida parapsilosis]
Length = 227
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 121/211 (57%), Gaps = 30/211 (14%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSHL 112
RG L+++EGLDR GK++Q S L S +L +FP+R+T++GQ+I+ YL+N Q L
Sbjct: 3 RGQLILIEGLDRSGKSTQASILASRFT----QSKLIKFPERSTAIGQLINEYLTNKQFQL 58
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID----------- 161
D + HLLFSANRWE + L G +I+DRY YSG+A++ AK D
Sbjct: 59 SDQSAHLLFSANRWELNQEILNLLHQGYFVILDRYIYSGIAYTLAKHKDMETTGATEATS 118
Query: 162 ---------IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
+EW AP+ GL PD ++L + ++ + R G+G ERYE +EFQ +V QC+
Sbjct: 119 VDSSTNLSNVEWLLAPDKGLPKPDLTMFLTLDMDEISSRKGWGDERYEMVEFQSRVKQCF 178
Query: 213 -QMLRDSSWKIIDACQSIEDVEKQLKEIVLD 242
++L D+S D I DV K+ E V D
Sbjct: 179 LEVLDDAS----DPSVRIVDVGKKSIEQVAD 205
>gi|403221901|dbj|BAM40033.1| thymidylate kinase [Theileria orientalis strain Shintoku]
Length = 188
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-SNQSHL 112
RG +V EG+DR GK++Q L L ++ FP++ T +G+++ YL S ++
Sbjct: 8 RGKFIVFEGIDRSGKSTQIKLLSQKLVEENIKNQIITFPNKGTPIGRILGDYLKSRDENI 67
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIG 171
+HLLFSANRWE+ + ++ L++GT +I DRY+YSG+++S A+G++ +WC P+ G
Sbjct: 68 PKQALHLLFSANRWEEMNNIKQVLESGTHVITDRYAYSGISYSVGAEGLNFDWCTIPDKG 127
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ 213
L+ PD V Y+DI PE+ RG +G E YE++E R V Q ++
Sbjct: 128 LIQPDVVFYMDIEPEQTTSRGDFGVEIYENIEHLRSVHQAFK 169
>gi|19074200|ref|NP_584806.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1]
gi|19068842|emb|CAD25310.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1]
gi|449329035|gb|AGE95310.1| thymidylate kinase [Encephalitozoon cuniculi]
Length = 191
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
S+G VV EGLDR GKT+ L L + + ++ RFP+R+ VG++I YL +++L
Sbjct: 2 SKGKFVVFEGLDRSGKTTIVGSLYESLLPIVPTSKI-RFPNRSGPVGKIIDGYLQKKTNL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ TIHLLFSA+R+E R M+E +L+ T ++ DRYS SG+A+S AKG+ ++WC A E L
Sbjct: 61 ESETIHLLFSADRYEHRLMIE-ELRRDTIILCDRYSMSGIAYSVAKGLSLDWCIASEALL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQSIE 230
PD +++D+P ++ R G+G E ++ + F +KV YQ L ++ + ++D +
Sbjct: 120 PKPDLTIFIDVPMDEICRRKGFGTEIHDTVPFLKKVLSAYQALLKKEENTLVVDGTLPVR 179
Query: 231 DVEKQLKEIVL 241
+V + +++ +L
Sbjct: 180 EVVEIVRKRIL 190
>gi|385301485|gb|EIF45673.1| thymidylate kinase [Dekkera bruxellensis AWRI1499]
Length = 206
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL- 112
R L+ +EGLDR GK++Q +L+ L+ SV+L +FP+RTT++G++I YL ++
Sbjct: 2 RAPLIAIEGLDRSGKSTQTLKLVRRLQDSXRSVKLLKFPERTTAIGKLIDXYLKDKKXKL 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
D ++HLLFSANRWE + + L + ++VDRY YSGVA+S AKG+ +WC P++G+
Sbjct: 62 SDESVHLLFSANRWELQDKIIBLLTNQSXVVVDRYVYSGVAYSGAKGLKFQWCLNPDLGM 121
Query: 173 LAPDSVLYLDIPPE-KAAERGGYGGERYEHLEFQRKV-AQCYQMLRDSSWKIIDA-CQSI 229
PD ++L + R G+G ERYE EFQ+KV AQ + S W I+ +SI
Sbjct: 122 PKPDVTIFLKFNDMLQVTTRSGFGEERYEESEFQKKVCAQFKKFEGFSEWHNINVDNKSI 181
Query: 230 EDVEKQLKEIV 240
E V ++ +V
Sbjct: 182 EXVHDEIWNLV 192
>gi|448510102|ref|XP_003866278.1| Cdc8 protein [Candida orthopsilosis Co 90-125]
gi|380350616|emb|CCG20838.1| Cdc8 protein [Candida orthopsilosis Co 90-125]
Length = 224
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 124/223 (55%), Gaps = 27/223 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSHL 112
RG L+++EGLDR GK++Q S L S +L +FPDR+TS+G++I+ YL+N Q L
Sbjct: 3 RGQLILIEGLDRSGKSTQASILASKFP----KSKLIKFPDRSTSIGKLINEYLTNKQFQL 58
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI------------ 160
D + HLLFSANRWE + L G +I+DRY YSG+A++ AK
Sbjct: 59 SDQSAHLLFSANRWELNKEIIDLLNQGYFVILDRYIYSGIAYTLAKHKHTNSTISQEDGT 118
Query: 161 -----DIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
+EW +P+ GL PD ++L + ++ + R G+G ERYE +EFQ +V QC+ +
Sbjct: 119 KTNLSSVEWLLSPDKGLPKPDLTMFLTLNMDEISSRKGWGDERYEMVEFQSRVKQCFLEI 178
Query: 216 ----RDSSWKIID-ACQSIEDVEKQLKEIVLDQVTACKKGKPF 253
+D KI+D +SIE V + L ++ + KP
Sbjct: 179 LDEQKDPGVKIVDVGNKSIEQVSELLWHVIESKKVNLLTDKPI 221
>gi|443711881|gb|ELU05444.1| hypothetical protein CAPTEDRAFT_104860 [Capitella teleta]
gi|443718945|gb|ELU09318.1| hypothetical protein CAPTEDRAFT_110243 [Capitella teleta]
Length = 233
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 132/232 (56%), Gaps = 26/232 (11%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYL-----EGLGH------SVELWRFPDRTTSVG 99
I RG L+VLEG D CGK++Q +L+ L EG G ELW+FP+R T++G
Sbjct: 2 IKRRGMLIVLEGCDGCGKSTQARKLVDALNTTPREGEGSLGGHVTHAELWKFPNRDTAIG 61
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-- 157
++I YL N+ ++DH IHLLF+ANRWE + L+ G ++I+DRY++SG+AFS+A
Sbjct: 62 RLIDEYLQNKCEMEDHAIHLLFAANRWEMVPCLLETLEKGISVIMDRYAFSGLAFSAAKK 121
Query: 158 KGIDIEWCKAPEIGLLAPDSVLYLDIPPEK------AAERGG---YGGERYEHLEFQRKV 208
K + +WCK + GL PD VLYL + + ER G Y ERYE + FQ +V
Sbjct: 122 KKLGFQWCKIADQGLPRPDLVLYLSLSSLEMEARWNKKERDGTMVYIRERYEKVAFQNQV 181
Query: 209 AQCYQ--MLRDSSWKIIDA-CQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
Y M+ + +W +I+ +SIE + + L I+ D V + K LW
Sbjct: 182 QAEYGKLMMGEDNWHVIEVNNKSIEVIHRNLLNIIKDNVKISTE-KVIGKLW 232
>gi|255728491|ref|XP_002549171.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404]
gi|240133487|gb|EER33043.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404]
Length = 222
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 128/208 (61%), Gaps = 25/208 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG L+++EGLDR GK++Q S L S S +L +FPDR+T +G++I+ YL+N+S L
Sbjct: 3 RGQLILIEGLDRSGKSTQASILASKF----TSSQLIKFPDRSTPIGKLINEYLTNKSFSL 58
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI------------ 160
+D + HLLFSANRWE ++ L G +I+DRY YSG+A++ AK
Sbjct: 59 NDQSAHLLFSANRWELNQQIQELLNKGYFVILDRYIYSGIAYTLAKNEINDESISSGKNS 118
Query: 161 ----DIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QML 215
D++W AP+ GL PD L+L + E+ ++R G+G ERYE +FQ KV C+ Q+L
Sbjct: 119 KQLGDVDWLLAPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYELQQFQAKVKDCFLQVL 178
Query: 216 --RDSSWKIIDACQ-SIEDVEKQLKEIV 240
+D S I+D + +I+ V KQL +I+
Sbjct: 179 DTKDPSICIVDVGEKNIDQVSKQLWDII 206
>gi|344302122|gb|EGW32427.1| hypothetical protein SPAPADRAFT_138291 [Spathaspora passalidarum
NRRL Y-27907]
Length = 221
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 134/223 (60%), Gaps = 24/223 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG L+++EGLDR GK++Q S L S L +L +FPDRTT +G++I+ YL+N+S L
Sbjct: 3 RGQLILIEGLDRSGKSTQASYLTSKLS----PSKLIKFPDRTTPIGKLINEYLTNKSFAL 58
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK------GI------ 160
+D + HLLFSANRWE + + L G +++DRY YSG+A++ AK G+
Sbjct: 59 NDQSAHLLFSANRWELNEEIHSLLNQGYFIVLDRYIYSGLAYTLAKHDFQGEGVSSGGSK 118
Query: 161 ----DIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY--QM 214
DI+W P+ GL PD L+L + ++ ++R G+G ERYE +FQ +V QC+ +
Sbjct: 119 KQLGDIDWLLGPDKGLPKPDLTLFLTLDLQEISKRKGFGDERYEMEQFQARVKQCFLKVL 178
Query: 215 LRDSSWKIID-ACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
++ + +I+D ++IE V ++L +++ + + P L+
Sbjct: 179 PKEDNVQIVDVGGKTIEQVSEELWNLIVSKSKHIQTNNPIELI 221
>gi|321456428|gb|EFX67536.1| hypothetical protein DAPPUDRAFT_63855 [Daphnia pulex]
Length = 195
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLS-YLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RGAL+VLE DR GK +QC ++ +L+ L RFPD IS+Y+
Sbjct: 4 RGALIVLERCDRSGKPTQCQKVKHLWLQESNKEAHLMRFPDEIVCDQPAISSYICYAKPK 63
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIG 171
D L SA R ++ L+ GT +IVDRYSYSG+AFS+AK +D+ WC+ + G
Sbjct: 64 DGTATELFTSARLLSIRPDIKKLLQKGTNVIVDRYSYSGIAFSAAKPNMDLRWCQQSDSG 123
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKII 223
LL PD V++LDI P +A RG YG ERYE+LE Q+ V Y L+D SW+++
Sbjct: 124 LLKPDLVIFLDIDPVEAETRGQYGSERYENLEMQKVVRSNYLKLQDESWRVM 175
>gi|281340989|gb|EFB16573.1| hypothetical protein PANDA_012286 [Ailuropoda melanoleuca]
Length = 138
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 100/136 (73%), Gaps = 4/136 (2%)
Query: 91 FPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYS 150
F +R+T +G+++S+YL +S ++DH++HLLFSANRWE+ +++ KL G TL+VDRY++S
Sbjct: 3 FLERSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKKKLSQGITLVVDRYAFS 62
Query: 151 GVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQ-RKV 208
GVAF+SAK ++WCK P++GL PD V++L + +AA RG +G ERYE+ FQ R +
Sbjct: 63 GVAFTSAKENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARRGEFGRERYENGNFQERAL 122
Query: 209 AQCYQMLRDSS--WKI 222
+ +Q++ D + WK+
Sbjct: 123 HRFHQLMADETLNWKV 138
>gi|190345821|gb|EDK37769.2| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 16/190 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG L+++EGLDR GKT+Q L + + S L +FPDR+T++G +I+ YL++ + L
Sbjct: 2 RGHLILIEGLDRSGKTTQTQILHNAIP----SSSLIKFPDRSTNIGTIINQYLTDHNFSL 57
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG--------IDIEW 164
D HLLFSANRWE + +E +L+AG T+I+DRY YSG+A+S AK +EW
Sbjct: 58 SDQAAHLLFSANRWELAASIEDQLQAGHTVIMDRYIYSGIAYSLAKSETSSSPEMASVEW 117
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIID 224
AP+ GL PD ++L + + A R +G ERYE +FQ V +C+ + D D
Sbjct: 118 LYAPDRGLPKPDVTIFLTLDIAEMAARKSWGEERYEQTKFQEVVKRCFLKVLDPH---AD 174
Query: 225 ACQSIEDVEK 234
I DV K
Sbjct: 175 PSVVIVDVNK 184
>gi|429962618|gb|ELA42162.1| thymidylate kinase [Vittaforma corneae ATCC 50505]
Length = 186
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+VLEGLDR GKT+ S L L+ + RFP+R T G+++ +L Q DHT
Sbjct: 5 LIVLEGLDRSGKTTVSSMLQQRLQ----PCTIIRFPNRATETGKLLDKFLKKQIKFSDHT 60
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IHLL+SANR+E+ + + LK+ T +I DRY SG +S+AKG+D EWCK+ + L PD
Sbjct: 61 IHLLYSANRYEEETRIRDLLKS-THVICDRYWLSGAVYSTAKGLDFEWCKSTDKLLPQPD 119
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ 213
+LD+P E+ ++R +G E ++ +EFQRKV + Y+
Sbjct: 120 FTFFLDVPVEETSKRTCFGNEVHDKIEFQRKVYEIYK 156
>gi|146420481|ref|XP_001486196.1| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 16/190 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG L+++EGLDR GKT+Q L + + S L +FPDR+T++G +I+ YL++ + L
Sbjct: 2 RGHLILIEGLDRSGKTTQTQILHNAIP----SSSLIKFPDRSTNIGTIINQYLTDHNFSL 57
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------GIDIEW 164
D HLLFSANRWE + +E +L+AG T+I+DRY YSG+A+S AK +EW
Sbjct: 58 SDQAAHLLFSANRWELAASIEDQLQAGHTVIMDRYIYSGIAYSLAKLETSSLPEMASVEW 117
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIID 224
AP+ GL PD ++L + + A R +G ERYE +FQ V +C+ + D D
Sbjct: 118 LYAPDRGLPKPDVTIFLTLDIAEMAARKSWGEERYEQTKFQEVVKRCFLKVLDPH---AD 174
Query: 225 ACQSIEDVEK 234
I DV K
Sbjct: 175 PSVVIVDVNK 184
>gi|410079302|ref|XP_003957232.1| hypothetical protein KAFR_0D04490 [Kazachstania africana CBS 2517]
gi|372463817|emb|CCF58097.1| hypothetical protein KAFR_0D04490 [Kazachstania africana CBS 2517]
Length = 215
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 18/202 (8%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-H 111
+RG +++EGLDR GKT+Q +RL E L + E +FP+R+T +G +I+ YL+N+S
Sbjct: 2 TRGKFILIEGLDRAGKTTQVNRLY---ERLSPNSESMKFPERSTQIGGLINEYLTNKSFQ 58
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIV-DRYSYSGVAFSSAK---GIDIEWCKA 167
+ D TIHLLFS+NRWE++ +E L IV DRY YSG+A+S AK G+D +WC
Sbjct: 59 MPDQTIHLLFSSNRWERQEYIEKTLVTDKKHIVMDRYVYSGIAYSLAKEVDGMDFDWCFG 118
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--------RDSS 219
+ GL+ PD ++L + + R G+G ERYE FQ KV + + + S
Sbjct: 119 CDKGLIRPDMTVFL-VNSKSNDNREGFGKERYEQKCFQEKVHEKFDITFQKLATKDNTSP 177
Query: 220 WKIIDAC-QSIEDVEKQLKEIV 240
+IID +SI +VE+ + ++V
Sbjct: 178 VQIIDVTDKSITEVEELIWKVV 199
>gi|294658466|ref|XP_460810.2| DEHA2F10252p [Debaryomyces hansenii CBS767]
gi|202953154|emb|CAG89151.2| DEHA2F10252p [Debaryomyces hansenii CBS767]
Length = 218
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 115/204 (56%), Gaps = 22/204 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GK++Q L L G +L +FPDR+T VG +I+ YL+N +L
Sbjct: 3 RGQLILIEGLDRSGKSTQSGILSERLPG----GKLIKFPDRSTKVGSIINEYLTNSELNL 58
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG----------IDI 162
D T HLLFSANRWE + L G +++DRY YSG+A+S AK I
Sbjct: 59 SDQTAHLLFSANRWELADSIVNDLNKGHFIVMDRYIYSGIAYSLAKSRFSNDSSPEMASI 118
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
+W +P+ GL PD ++L + E+ + R G+G ERYE FQ+ V C+ + ++
Sbjct: 119 DWLYSPDKGLPKPDLTIFLTLSLEELSNRKGWGEERYEKENFQKSVKNCFLEVLNAD--- 175
Query: 223 IDACQSIEDVEKQLKEIVLDQVTA 246
DA I DV + +DQVTA
Sbjct: 176 NDASVHIIDV----NNLNIDQVTA 195
>gi|323347864|gb|EGA82125.1| Cdc8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 168
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 104/159 (65%), Gaps = 8/159 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ S L
Sbjct: 3 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSFQL 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 60 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 119
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRK 207
+GLL PD L+L + AE+ G+G + + + RK
Sbjct: 120 VGLLKPDLTLFLSTQDVDNNAEKSGFGERKIRNCQVSRK 158
>gi|11875610|gb|AAG40728.1|AF272669_1 thymidine kinase [White spot syndrome virus]
gi|15021563|gb|AAK77840.1|AF369029_171 ORF171, putative chimeric thymidine kinase - thymidylate kinase
[shrimp white spot syndrome virus]
gi|19482046|gb|AAL89322.1| WSSV454 [shrimp white spot syndrome virus]
Length = 388
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
LVVLEG DRCGK++Q LL+ + E FPDR++ G++I+ YL+ + LDDH
Sbjct: 194 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIELDDHA 253
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID-IEWCKAPEIGLLAP 175
HLLFSANRWE S ++ L G +++DRY YSG+ FS A+G+D +EWC A + GL P
Sbjct: 254 AHLLFSANRWEVCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVDTVEWCSASDEGLPQP 313
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDACQSIED 231
D VL + + EK + R +G ER+E Q + + L + + W +DA +IE+
Sbjct: 314 DLVLLMLLDVEKCSNRDTFGVERFETNSIQERARALFLDLANKDEKNVWIKVDARGTIEE 373
Query: 232 VEKQLKEIVLDQV 244
V+ ++ IV + V
Sbjct: 374 VQTKIINIVYNIV 386
>gi|17158497|ref|NP_477917.1| wsv395 [Shrimp white spot syndrome virus]
gi|17016791|gb|AAL33397.1| wsv395 [shrimp white spot syndrome virus]
gi|417072623|gb|AFX59772.1| wsv395 [White spot syndrome virus]
Length = 398
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
LVVLEG DRCGK++Q LL+ + E FPDR++ G++I+ YL+ + LDDH
Sbjct: 204 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIELDDHA 263
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID-IEWCKAPEIGLLAP 175
HLLFSANRWE S ++ L G +++DRY YSG+ FS A+G+D +EWC A + GL P
Sbjct: 264 AHLLFSANRWEVCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVDTVEWCSASDEGLPQP 323
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD----SSWKIIDACQSIED 231
D VL + + EK + R +G ER+E Q + + L + + W +DA +IE+
Sbjct: 324 DLVLLMLLDVEKCSNRDTFGVERFETNSIQERARALFLDLANKDEKNVWIKVDARGTIEE 383
Query: 232 VEKQLKEIVLDQV 244
V+ ++ IV + V
Sbjct: 384 VQTKIINIVYNIV 396
>gi|253744823|gb|EET00963.1| CDC8 [Giardia intestinalis ATCC 50581]
Length = 264
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+V+EGLDR GK + L++ LE G SV + FPDRTT G ++ +L + L
Sbjct: 41 RGLLIVVEGLDRAGKDTLIEHLMNLLEQAGESVMVQAFPDRTTKSGIILDRFLRREIDLS 100
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D H L++ NR E + L +GTT+I RY+YSGVA+++AKG DI C ++GLL
Sbjct: 101 DWDCHELYAENRRELEETLCKALLSGTTVICSRYAYSGVAYTAAKGHDIRKCMKADMGLL 160
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQ 227
PD +++LD+ A R +G ERYE +FQ KV +Q L W+++ Q
Sbjct: 161 RPDLIVFLDVDARTVAMRNSFGKERYETHDFQVKVYTAFQTL----WELLRKSQ 210
>gi|115433106|ref|XP_001216690.1| thymidylate kinase [Aspergillus terreus NIH2624]
gi|114189542|gb|EAU31242.1| thymidylate kinase [Aspergillus terreus NIH2624]
Length = 175
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 7/161 (4%)
Query: 103 SAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG--- 159
S +QS +DDH+IHLLFSANRWE +E + GTT+IVDRYSYSG +S+AKG
Sbjct: 10 SNTFGSQSQMDDHSIHLLFSANRWEVAQSIERDVDNGTTVIVDRYSYSGAVYSAAKGNPS 69
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-- 217
+ + W PE+GL PD L+L I PE+AA+RGG+G ERYE+ Q +V + ++ + D
Sbjct: 70 LSLGWAWQPEVGLPRPDLCLFLQITPEEAAKRGGFGAERYENETMQTRVRELFKTIFDLQ 129
Query: 218 --SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+IDA +S +DV + +++ V D++ + P L
Sbjct: 130 PRGDVTVIDAGRSFQDVAQDMRKAVEDRIACLGRIGPLRKL 170
>gi|68486049|ref|XP_713041.1| hypothetical protein CaO19.8730 [Candida albicans SC5314]
gi|68486114|ref|XP_713007.1| hypothetical protein CaO19.1137 [Candida albicans SC5314]
gi|46434470|gb|EAK93878.1| hypothetical protein CaO19.1137 [Candida albicans SC5314]
gi|46434509|gb|EAK93916.1| hypothetical protein CaO19.8730 [Candida albicans SC5314]
gi|238878423|gb|EEQ42061.1| thymidylate kinase [Candida albicans WO-1]
Length = 224
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 126/210 (60%), Gaps = 26/210 (12%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+RG L+++EGLDR GK++Q S L + L +L +FPDR+T +G++I+ YL+N+S
Sbjct: 2 ARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSFT 57
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG------------ 159
L D HLLFSANRWE ++ L G +I+DRY YSG+A++ AK
Sbjct: 58 LSDQAAHLLFSANRWELSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQGKN 117
Query: 160 ----IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
+I+W +P+ GL PD L+L + E+ ++R G+G ERYE +FQ KV QC+ +
Sbjct: 118 KQQLNNIDWLLSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYELQQFQAKVKQCFLEI 177
Query: 216 ----RDSSWKIID-ACQSIEDVEKQLKEIV 240
+D + +I+D ++I+ V QL EI+
Sbjct: 178 LDTNKDPTIRIVDVGGKTIDQVTTQLWEII 207
>gi|308160228|gb|EFO62726.1| CDC8 [Giardia lamblia P15]
Length = 263
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 35 CTPFRM---ESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRF 91
C P + E S R G+ +RG +V+EGLDR GK + +L++ L+ G SV + F
Sbjct: 18 CQPSNLQDSEYSEERRKGDNITRGLFIVIEGLDRAGKDTMIDQLVALLKQTGESVMVQAF 77
Query: 92 PDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSG 151
PDRTT G ++ +L + L D H L++ NR E + L GTT+I RY+YSG
Sbjct: 78 PDRTTKSGIILDRFLRRELDLSDWDCHKLYAENRKELEEGLCNTLLTGTTVICSRYAYSG 137
Query: 152 VAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC 211
VA+++AKG DI C + GLL PD V++LD+ + A R +G ERYE FQ KV
Sbjct: 138 VAYTAAKGHDIRRCMEADKGLLRPDLVVFLDVDAKTVALRTDFGKERYETQNFQIKVYAA 197
Query: 212 YQML 215
+Q L
Sbjct: 198 FQTL 201
>gi|429965021|gb|ELA47018.1| thymidylate kinase [Vavraia culicis 'floridensis']
Length = 231
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 116/191 (60%), Gaps = 11/191 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLE--GLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
+V+EG+DR GK++ C +L+ L+ S L +PDRTT++G++++ YL Q +
Sbjct: 41 FIVIEGIDRSGKSTLCRKLVERLKETATNSSPVLINYPDRTTTIGKLVNLYLKKQITFNK 100
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T HLLFSANRWEK ++ LK +I DRY YSG+A+S A G+D +W + P+ GL+
Sbjct: 101 ETSHLLFSANRWEKNEEVKKLLK-DHVVICDRYFYSGIAYSIALGVDEKWAREPDRGLIE 159
Query: 175 PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR-----DSSWKIIDACQSI 229
PD +++LD+ P + R +G E Y++L+ Q K+ Y L+ + +ID +S+
Sbjct: 160 PDILVFLDVQPHRTVTREDFGEEIYDNLDIQEKI---YLQLKKCCSESKNCVVIDGHKSV 216
Query: 230 EDVEKQLKEIV 240
E+ ++ +++
Sbjct: 217 EEAVNEVYDLL 227
>gi|159467729|ref|XP_001692044.1| hypothetical protein CHLREDRAFT_94429 [Chlamydomonas reinhardtii]
gi|158278771|gb|EDP04534.1| predicted protein [Chlamydomonas reinhardtii]
Length = 167
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 3/119 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V EG+DRCGK++QCS LL L+ G ELWRFPDRTT +G +I+ YL ++ L+
Sbjct: 49 RGALIVFEGIDRCGKSTQCSLLLESLQKQGVPAELWRFPDRTTLIGGLINEYLQKKASLN 108
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAPE 169
D +H+LF ANR EKR M L GTTL++DRYSYSGVA+++AKG+ ++C++ E
Sbjct: 109 DAAVHMLFVANRHEKRDEMLRLLAGGTTLVLDRYSYSGVAYTAAKGVPHLGPDFCRSVE 167
>gi|358336715|dbj|GAA40579.2| dTMP kinase [Clonorchis sinensis]
Length = 253
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSN 108
N G + +EG DR GK++Q S L L L G + L +FPDR T++G+ + YL
Sbjct: 21 NRSHSGIFIAIEGADRTGKSTQASLLADALTKLTGRTALLLKFPDRDTALGKCLDNYLKG 80
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI---EWC 165
+ +D H +HLLF+ANRWEK+ + + L +G ++ DRYSYSG+A+++AK +WC
Sbjct: 81 DTDVDTHALHLLFTANRWEKQDELRSALSSGCCVVADRYSYSGIAYTAAKPPPTPSWQWC 140
Query: 166 KAPEIGLLAPDSVLYLDIPPE---KAAERGGYGGERYEHLEFQRKVAQCYQML 215
A E GL+ PD V+ L PE +R GYG ERYE +FQR+V + Y L
Sbjct: 141 CAMEKGLVEPDLVICL--TPEHFDHLKDRNGYGNERYETEDFQRRVLENYTRL 191
>gi|225683576|gb|EEH21860.1| thymidylate kinase [Paracoccidioides brasiliensis Pb03]
Length = 224
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 15/195 (7%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
GN RGAL+V+EGLDR GK++QC+ L L+ GH + DR T +L
Sbjct: 7 GNKTQRGALIVVEGLDRAGKSTQCALLQEALQRGGHE----NYGDRKTD---QCPIWLET 59
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWC 165
+ + +I LFSANRWE ++ + G ++I+DRYSYSG +S+AK G+ ++W
Sbjct: 60 HNWMTIQSI-FLFSANRWEAAKEIQKDISNGISIIIDRYSYSGAVYSAAKDVPGLSLDWA 118
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWK-- 221
PEIGL PD L+L+I PE+AA RGGYG ERYE+ Q +V Q +Q R+
Sbjct: 119 WQPEIGLPQPDIWLFLNISPEEAARRGGYGLERYENDILQARVRQLFQTFIEREDPANVC 178
Query: 222 IIDACQSIEDVEKQL 236
+I+A +S DV + +
Sbjct: 179 VINAGRSEADVAQDI 193
>gi|401410945|ref|XP_003884920.1| Thymidylate kinase, related [Neospora caninum Liverpool]
gi|325119339|emb|CBZ54892.1| Thymidylate kinase, related [Neospora caninum Liverpool]
Length = 271
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 121/246 (49%), Gaps = 50/246 (20%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G RG LVV EG+DR GK++Q L G EL RFPDRTTS+GQ++ +L++
Sbjct: 3 GFTPKRGCLVVFEGIDRSGKSTQARLAYERLLKEGQPTELIRFPDRTTSIGQVLDKFLAS 62
Query: 109 QSHLDD--------HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS----- 155
+ ++ HLLF+ANRWE ++ + L G T++VDRYS+SG+A++
Sbjct: 63 ATWSNEGPCQIPPPQLTHLLFAANRWEAQARILRALGEGKTVLVDRYSFSGIAYTVGAAP 122
Query: 156 --------------SAKG-------------------IDIEWCKAPEIGLLAPDSVLYLD 182
+A G +D +C+ E GLLAPD+V +LD
Sbjct: 123 VLAETEAKSLQADANASGDPAKAAWSWAASTAATGASVDPAFCRETERGLLAPDAVFFLD 182
Query: 183 IPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-SSWKIIDACQSIEDVEKQLKEIVL 241
I P + RGGYG E YE L Q +V Q Y+ W+ I A + +L E V+
Sbjct: 183 ISPRETQSRGGYGEEVYEKLATQERVYQVYRQFESLPYWRRIPAASVSPN---ELHETVI 239
Query: 242 DQVTAC 247
+ + A
Sbjct: 240 ENLKAV 245
>gi|241950051|ref|XP_002417748.1| dTMP kinase, putative; thymidylate kinase, putative [Candida
dubliniensis CD36]
gi|223641086|emb|CAX45461.1| dTMP kinase, putative [Candida dubliniensis CD36]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 127/210 (60%), Gaps = 26/210 (12%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+RG L+++EGLDR GK++Q S L + L +L +FPDR+T +G++I+ YL+N+S
Sbjct: 2 ARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSFT 57
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG------------ 159
L D + HLLFSANRWE ++ L G +I+DRY YSG+A++ AK
Sbjct: 58 LSDQSAHLLFSANRWELSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQGKN 117
Query: 160 ----IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
+++W +P+ GL PD L+L + E+ ++R G+G ERYE +FQ KV QC+ +
Sbjct: 118 KQQLNNVDWLLSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYELQQFQAKVKQCFLEI 177
Query: 216 RDS----SWKIID-ACQSIEDVEKQLKEIV 240
D+ + +I+D ++I+ V QL EI+
Sbjct: 178 LDTNDDPTIRIVDVGGKTIDQVTTQLWEII 207
>gi|302506264|ref|XP_003015089.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371]
gi|291178660|gb|EFE34449.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371]
Length = 177
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 7/163 (4%)
Query: 101 MISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA--- 157
MI+ YL + LDDH +HLLFSANRWE + + +++G T+IVDRYSYSG +S+A
Sbjct: 1 MINQYLRGEIQLDDHAVHLLFSANRWEAAAQIRQDIESGITVIVDRYSYSGAVYSAAKEN 60
Query: 158 KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY----Q 213
K + ++W PE+GL PD +L+I E AA RGGYG ERYE + Q+KV + + +
Sbjct: 61 KELQLDWAWRPEVGLPRPDIWFFLNISIEAAAARGGYGTERYETINLQKKVGKLFLSLTE 120
Query: 214 MLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+ + +++DA + I+++ +Q++E VL + P L
Sbjct: 121 LKGNEDMRVVDAGRGIDEISRQIREEVLQTMAKVDSIGPLRKL 163
>gi|195335464|ref|XP_002034385.1| GM19929 [Drosophila sechellia]
gi|194126355|gb|EDW48398.1| GM19929 [Drosophila sechellia]
Length = 182
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 32/190 (16%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL++ EG DR GKT+Q L+ L+ G FP+R++S+GQ+I++YL+N L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D IHL+FSANRWE + ++WC APE GL+
Sbjct: 66 DEVIHLMFSANRWEHMNQT-----------------------------LDWCYAPESGLI 96
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSIE 230
PD+V YL P + RG YG ERYE +EFQ +VA+ + + S + DA QS+E
Sbjct: 97 KPDAVFYLRAPSNELTNRGQYGDERYEKVEFQGRVAEVFDRICSKEASYFHKFDATQSVE 156
Query: 231 DVEKQLKEIV 240
D+ + I
Sbjct: 157 DLHALIGRIT 166
>gi|396081269|gb|AFN82887.1| thymidylate kinase [Encephalitozoon romaleae SJ-2008]
Length = 191
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 117/192 (60%), Gaps = 4/192 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
S+G VV EGLDR GKT+ + L L SV RFP+R VG++I YL + L
Sbjct: 2 SKGKFVVFEGLDRSGKTTIVNTLYESLLP-TVSVNKIRFPNRNGCVGKVIDEYLQKKISL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ TIHLLFSA+R+E ++M+E +L+ + ++ DRYS SGVA+S AKG+ ++WC E L
Sbjct: 61 KNETIHLLFSADRYEHKAMIE-ELRKDSIVLCDRYSMSGVAYSVAKGLSLDWCAMSESLL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDACQSIE 230
PD +++D+P ++ R +G E ++ + F +KV YQ+L + + I+D I+
Sbjct: 120 PKPDLTVFIDVPMDEICRRKEFGKEIHDSITFLKKVFLAYQILLKEEKNVFIVDGTLPID 179
Query: 231 DVEKQLKEIVLD 242
++ + +K+ + +
Sbjct: 180 EIIEIVKKKIFE 191
>gi|440494619|gb|ELQ76984.1| Thymidylate kinase/adenylate kinase [Trachipleistophora hominis]
Length = 228
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEG--LGHSVELWRFPDRTTSVGQMISAYL 106
+++ + +V+EG+DR GK++ C L+ L+ + + L +PDRTT++G++++ YL
Sbjct: 30 AHMNEKRKFIVIEGIDRSGKSTLCQGLVQKLKNSAVNSNPVLINYPDRTTAIGKLVNLYL 89
Query: 107 SNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
+ + T HLLFSANRWEK ++ +L +I DRY YSG+A+S A G D +W
Sbjct: 90 KKELTFNKETSHLLFSANRWEKNEEVK-RLLQDHIVICDRYFYSGIAYSIALGTDEKWAH 148
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV 208
P+ GL+ PD +++LD+PP + + R +G E Y++L+ Q K+
Sbjct: 149 EPDKGLVEPDILVFLDVPPYRTSTRKDFGDEIYDNLDIQEKI 190
>gi|47212537|emb|CAF90553.1| unnamed protein product [Tetraodon nigroviridis]
Length = 166
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 77/96 (80%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+D+ GKT+QC +L+ L+ G E+ RFPDRTT++GQ+ISAYL N+S L
Sbjct: 5 RGALIVLEGVDKAGKTTQCKKLVQALQERGQPAEMMRFPDRTTAIGQLISAYLENKSELT 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSY 149
D T+HLLF+ANRWE +++ KL+ GTTL+VDRY++
Sbjct: 65 DQTVHLLFAANRWEMVPLIKKKLQQGTTLVVDRYAF 100
>gi|29841447|gb|AAP06479.1| SJCHGC06009 protein [Schistosoma japonicum]
Length = 238
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL-WRFPDRTTSVGQMISAYLSNQSH 111
SRG VVLEG DR GKT+Q S L L + L +FP+R T +G + AYL
Sbjct: 6 SRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYLGGNGD 65
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAP 168
++ H +HLLF+ANRWEK+S + + G +++ DRY YSG+A+++AK + EWC
Sbjct: 66 INSHALHLLFTANRWEKQSEIRNAISNGISVVADRYIYSGIAYTAAKLPPTPNWEWCCEM 125
Query: 169 EIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL D V+ L PE E R GYG ERYE +FQ++V + Y L
Sbjct: 126 EKGLLEADLVICL--TPENLDELNSRNGYGNERYEKDDFQKRVLENYVRL 173
>gi|429327425|gb|AFZ79185.1| thymidylate kinase, putative [Babesia equi]
Length = 214
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 118/197 (59%), Gaps = 9/197 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLS---YLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+G L+V EG+DR GKTSQ +LLS LE + H + FPDR+T +G ++ YL +
Sbjct: 9 KGKLIVFEGIDRSGKTSQI-KLLSERLTLENIPH--QTIGFPDRSTRIGSLLEDYLKRKD 65
Query: 111 H-LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAP 168
+ +HLLFSANRWE S + L++GT +++DRY+YSG+++S A+G++ +WCK P
Sbjct: 66 EEMPRQALHLLFSANRWENMSRIAKLLESGTHVLLDRYAYSGISYSVGAEGLNFDWCKVP 125
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-SSWKIIDACQ 227
+ G++ PD V ++++ + R +G E YE ++ KV ++ + W+ IDA
Sbjct: 126 DCGIVEPDVVFFMNVSAQNTCTRSSFGDEIYEKVKTLEKVYDVFRRFDNLPYWRDIDASD 185
Query: 228 SIEDVEKQLKEIVLDQV 244
+ +++ + ++ +
Sbjct: 186 DPSVIHEKIYKTTMEII 202
>gi|297607687|ref|NP_001060418.2| Os07g0639900 [Oryza sativa Japonica Group]
gi|255678005|dbj|BAF22332.2| Os07g0639900 [Oryza sativa Japonica Group]
Length = 131
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 75/94 (79%), Gaps = 5/94 (5%)
Query: 39 RMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV 98
RMES SS RGAL+VLEGLDR GK+SQC+RLLS+L+G G E WRFPDR TSV
Sbjct: 40 RMESGSSQ-----GGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSV 94
Query: 99 GQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMM 132
GQMISAYL+N+S LDD TIHLLFSANRWEKR ++
Sbjct: 95 GQMISAYLANESELDDRTIHLLFSANRWEKRFVL 128
>gi|345307032|ref|XP_001513078.2| PREDICTED: thymidylate kinase-like [Ornithorhynchus anatinus]
Length = 169
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 105/173 (60%), Gaps = 28/173 (16%)
Query: 89 WR-FPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRY 147
WR R+T +G+++S+YL + +L+DHT+HLLFSANRWE+ +M+ KL G TLIVDRY
Sbjct: 19 WRKSKQRSTEIGKLLSSYLERKINLEDHTVHLLFSANRWEQVPLMKEKLNQGITLIVDRY 78
Query: 148 SYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRK 207
++SGVAF+SAK ++ +AA RG +G ERYE+ FQ K
Sbjct: 79 AFSGVAFTSAK-----------------------ELSTVEAATRGSFGTERYENNAFQEK 115
Query: 208 VAQCY-QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
Q + ++++D + WK+IDA ++IED+ K++ + + + K KP LW
Sbjct: 116 ALQSFHKLMKDKTLNWKVIDASKNIEDLHKEIHHLSKEAIKEAGK-KPIGELW 167
>gi|256076848|ref|XP_002574721.1| thymidylate kinase [Schistosoma mansoni]
gi|353230555|emb|CCD76972.1| thymidylate kinase [Schistosoma mansoni]
Length = 235
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 7/166 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL-WRFPDRTTSVGQMISAYLSNQSH 111
S+G VVLEG DR GKT+Q S L L + L +FPDR T +G + +YLS
Sbjct: 6 SQGIFVVLEGADRVGKTTQASLLAKALSEITQRETLSVKFPDRDTPLGHHLDSYLSGIGD 65
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG---IDIEWCKAP 168
++ H +HLLF+ANRWE+++ + + G ++ DRY YSG+A+++AK + EWC
Sbjct: 66 INKHALHLLFTANRWERQAEIRKAISNGIPVVADRYIYSGIAYTAAKAPPTPNWEWCWEM 125
Query: 169 EIGLLAPDSVLYLDIPP--EKAAERGGYGGERYEHLEFQRKVAQCY 212
E GL+ PD V+ L P ++ + R GYG ERYE+ +FQ++V + Y
Sbjct: 126 EKGLVEPDLVICL-TPGNLDELSSRNGYGKERYENDDFQKRVLENY 170
>gi|226468432|emb|CAX69893.1| deoxythymidylate kinase (thymidylate kinase) [Schistosoma
japonicum]
Length = 238
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 99/170 (58%), Gaps = 9/170 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL-WRFPDRTTSVGQMISAYLSNQSH 111
SRG VVLEG DR GKT+Q S L L + L +FP+R T +G + AYL
Sbjct: 6 SRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYLGGNGD 65
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAP 168
++ H +HLLF+ANRWEK+S + + G +++ DRY YSG+A+++AK + EWC
Sbjct: 66 INSHALHLLFTANRWEKQSEIRNAISNGISVVADRYIYSGIAYTAAKLPPTPNWEWCCEM 125
Query: 169 EIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL D V+ L PE E R GYG E YE +FQ++V + Y L
Sbjct: 126 EKGLLEADLVICL--TPENLDELNSRNGYGNECYEKDDFQKRVLENYVRL 173
>gi|308198161|ref|XP_001387114.2| thymidylate kinase [Scheffersomyces stipitis CBS 6054]
gi|149389058|gb|EAZ63091.2| thymidylate kinase [Scheffersomyces stipitis CBS 6054]
Length = 229
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 31/214 (14%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GK++Q + L E LG S +L +FPDR+TSVG++I+ YL+N S L
Sbjct: 3 RGQLILIEGLDRSGKSTQSAILA---EKLGKS-KLLKFPDRSTSVGKIINEYLTNSSFQL 58
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK----------GI-- 160
D T HLLFSANRWE + + L G +I+DRY YSG+A+S AK G+
Sbjct: 59 SDQTAHLLFSANRWELNNEIIELLNDGYFVILDRYIYSGIAYSLAKYEYSKTANNSGVIA 118
Query: 161 ---------DIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQC 211
D+EW P+ GL PD L+L + + +R G+G ERYE EFQ+ V
Sbjct: 119 STTASEQMGDVEWLYGPDKGLPKPDLTLFLTLDLVELGKRKGWGNERYELEEFQKIVKSS 178
Query: 212 YQML----RDSSWKIIDAC-QSIEDVEKQLKEIV 240
+ + D + +++D ++IE+V + E+V
Sbjct: 179 FLRILNHEEDETVELVDVSGKNIEEVTALIWEVV 212
>gi|302685608|ref|XP_003032484.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
gi|300106178|gb|EFI97581.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
Length = 282
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 79/108 (73%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+ +RGA +V+EGLDR GK++Q ++L L G VEL +FPDRTT++G+MI AYL
Sbjct: 1 MPTRGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNI 60
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
+DDH +HLL+SANRWE S + L GTT+I DRY++SG+AFS++K
Sbjct: 61 EMDDHVVHLLYSANRWELASRISTLLSEGTTIICDRYAFSGIAFSASK 108
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML-------R 216
WC+AP+IGL APD L+ DI PE A RGGYG ERYE + QR+V + Y L R
Sbjct: 168 WCRAPDIGLPAPDVTLFFDIAPEAARARGGYGEERYEREDVQRRVMEVYARLGAEMEAAR 227
Query: 217 DSSWKIIDACQSIEDVE-KQLKEIVLDQVTAC 247
SW +DA ++ E+V+ + E V D V A
Sbjct: 228 PGSWVRVDAARAWEEVDAARAIEEVADAVWAV 259
>gi|323332865|gb|EGA74268.1| Cdc8p [Saccharomyces cerevisiae AWRI796]
gi|323354251|gb|EGA86094.1| Cdc8p [Saccharomyces cerevisiae VL3]
Length = 138
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 91/133 (68%), Gaps = 7/133 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-H 111
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ S
Sbjct: 2 GRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSFQ 58
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAP 168
L D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P
Sbjct: 59 LSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQP 118
Query: 169 EIGLLAPDSVLYL 181
++GLL PD L+
Sbjct: 119 DVGLLKPDLTLFF 131
>gi|428164973|gb|EKX33981.1| hypothetical protein GUITHDRAFT_43854, partial [Guillardia theta
CCMP2712]
Length = 155
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Query: 91 FPDRTTSVGQMISAYLSNQS-HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSY 149
FP R T +G+ I +L S LD H +HLLFSANRWE + + L+ G ++VDRYS+
Sbjct: 3 FPRRETILGKFIDHHLRTASARLDIHLVHLLFSANRWEAAAEILRSLREGRHVVVDRYSF 62
Query: 150 SGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVA 209
SG+A+S A+G+ +WC + E+GL APD V LDI P AA+R GYG ERYE +E Q++V
Sbjct: 63 SGLAYSIAQGLGRDWCFSWEVGLPAPDVVFLLDIDPSAAAQRPGYGKERYEKVELQQRVR 122
Query: 210 QCYQMLRD-----SSWKIIDACQSIEDVEKQLK 237
+ + S W ++DA E+ KQ+
Sbjct: 123 NAFLEEAEKGKGASRWIMLDASLPSEETAKQVN 155
>gi|226488066|emb|CAX75698.1| Thymidylate kinase [Schistosoma japonicum]
gi|226488068|emb|CAX75699.1| Thymidylate kinase [Schistosoma japonicum]
Length = 224
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG VV EG+++CGK +Q L L + G L FPD++T VG++++ Y + L
Sbjct: 7 RGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYFDGKLQL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GIDIEWCKA 167
+ H HLL ANRWE++ + LKAG +++VDRYSYSG+A+++AK D +WC++
Sbjct: 67 ELHASHLLHIANRWERQDEISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADWKWCRS 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL PD + L PE AE R GG ++E ++FQ++V + L
Sbjct: 127 VEYGLLQPDFIFCL--APENFAEISVRDSSGGNKFETMDFQKRVLTYFGRL 175
>gi|189502888|gb|ACE06825.1| unknown [Schistosoma japonicum]
gi|226488060|emb|CAX75695.1| Thymidylate kinase [Schistosoma japonicum]
gi|226488064|emb|CAX75697.1| Thymidylate kinase [Schistosoma japonicum]
Length = 224
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG VV EG+++CGK +Q L L + G L FPD++T VG++++ Y + L
Sbjct: 7 RGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYFDGKLQL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GIDIEWCKA 167
+ H HLL ANRWE++ + LKAG +++VDRYSYSG+A+++AK D +WC++
Sbjct: 67 ELHASHLLHIANRWERQDEISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADWKWCRS 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL PD + L PE AE R GG ++E ++FQ++V + L
Sbjct: 127 VEYGLLQPDFIFCL--APENFAEISVRDSSGGNKFETMDFQKRVLTYFGRL 175
>gi|357610935|gb|EHJ67226.1| putative thymidylate kinase [Danaus plexippus]
Length = 192
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 86/127 (67%), Gaps = 9/127 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+V+EG+DR GKT+QC L+ L+ + FPDRT+ +G++I+ YL+ ++ +
Sbjct: 5 RGALIVIEGVDRTGKTTQCRNLVEGLKNKDVAAMYSNFPDRTSEIGKVINHYLTRKTEMS 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D TIHLLFSANRWEK + +L+ GTTLI+DRY YSGVAFS AKGI I +P
Sbjct: 65 DETIHLLFSANRWEKCGEIIKQLETGTTLIIDRYCYSGVAFSGAKGIYI----SPR---- 116
Query: 174 APDSVLY 180
PD LY
Sbjct: 117 -PDIFLY 122
>gi|239788950|dbj|BAH71126.1| ACYPI007604 [Acyrthosiphon pisum]
Length = 131
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GKT+QC++L+ L + + FPDR+T +G +I+ YLS + L
Sbjct: 7 RGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYLSRKIELP 66
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG-IDIEWC 165
D ++HLLFSANRWE + ++++G TLIVDRYSYSGV F+SAK +D +WC
Sbjct: 67 DRSVHLLFSANRWELEPEIRKQIESGVTLIVDRYSYSGVVFTSAKQCVDFKWC 119
>gi|29841168|gb|AAP06181.1| similar to Chain A, Mutant Human Thymidylate Kinase F105y complexed
With Dtmp And Appnp [Schistosoma japonicum]
Length = 219
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG VV EG+++CGK +Q L L + G L FPD++T VG++++ Y + L
Sbjct: 7 RGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYFDGKLQL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GIDIEWCKA 167
+ H HLL ANRWE++ + LKAG +++VDRYSYSG+A+++AK D +WC++
Sbjct: 67 ELHASHLLHIANRWERQDEISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADWKWCRS 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL PD + L PE AE R GG ++E ++FQ++V + L
Sbjct: 127 VEYGLLQPDFIFCL--APENFAEISVRDSSGGNKFETMDFQKRVLTYFGRL 175
>gi|410493634|ref|YP_006908572.1| Thymidylate Kinase [Epinotia aporema granulovirus]
gi|354805068|gb|AER41490.1| Thymidylate Kinase [Epinotia aporema granulovirus]
Length = 224
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G +V EGLDR GK+SQ +RL G ++FPDR+T GQ+++ +L+ D
Sbjct: 2 GFIVAFEGLDRSGKSSQVARLAQTWHG---PTTTFKFPDRSTPTGQILNKHLTEGVEDCD 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
IHLLF ANRWE+ + + + + +I+DRY YSG+A+S+AKG+D ++C G
Sbjct: 59 EYIHLLFCANRWEQMKKINQLAAEESHLVIIDRYLYSGIAYSAAKGLDFDFCVNTNWGQA 118
Query: 174 APDSVLYLD-IPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKII 223
PD V +++ +PP + R GYG E YE FQRKV + Y+ + +W ++
Sbjct: 119 EPDLVFFMNYVPP---STRTGYGEEIYEREMFQRKVFEQYKKIATKTWVML 166
>gi|302813858|ref|XP_002988614.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii]
gi|300143721|gb|EFJ10410.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii]
Length = 399
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 78/102 (76%), Gaps = 4/102 (3%)
Query: 86 VELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVD 145
++LW P RT+ + ++ +L + LDD +H+LFS NRWEKR ME KL A TTL+VD
Sbjct: 1 MKLW--PARTSRLRCLL--FLGRGAELDDRAVHILFSPNRWEKRLQMENKLMARTTLVVD 56
Query: 146 RYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEK 187
RYSYSGVAFS+AKG+D+EWCKAPE+ LLA D VLYLDI PE+
Sbjct: 57 RYSYSGVAFSAAKGLDLEWCKAPEVELLAADLVLYLDISPEE 98
>gi|226488062|emb|CAX75696.1| Thymidylate kinase [Schistosoma japonicum]
Length = 224
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 11/171 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG VV EG+++CGK +Q L L + G L FPD++T VG++++ Y + L
Sbjct: 7 RGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYFDGKLQL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GIDIEWCKA 167
+ H HLL ANRWE++ + LKAG +++VDRYSYSG+A+++AK D +WC++
Sbjct: 67 ELHASHLLHIANRWERQDEISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADWKWCRS 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL PD + L PE AE R G ++E ++FQ++V + L
Sbjct: 127 VEYGLLQPDFIFCL--APENFAEISVRDSSGSNKFETMDFQKRVLTYFGRL 175
>gi|256070556|ref|XP_002571609.1| thymidylate kinase [Schistosoma mansoni]
gi|238656754|emb|CAZ27839.1| thymidylate kinase [Schistosoma mansoni]
Length = 222
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 11/171 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG VV EG+++CGK +Q L L + G L FPD++T +G++++ Y + L
Sbjct: 7 RGLFVVFEGVEKCGKKTQSELLQEALTQITGKQALLIHFPDKSTPIGKLLTEYSDGKLQL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GIDIEWCKA 167
+ H HLL+ ANRWE++ + + LKAG +++VDRYSYSG+A ++AK D +WC++
Sbjct: 67 EPHAAHLLYIANRWERQDEISSALKAGISVVVDRYSYSGIANTAAKFHPLSEFDWKWCRS 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEHLEFQRKVAQCYQML 215
E GLL PD + L PE AE R + +++E ++FQ+++ Y L
Sbjct: 127 MEYGLLQPDFIFCL--APENFAEISVREAFSDKKFETMDFQKRILIYYGRL 175
>gi|452841745|gb|EME43682.1| hypothetical protein DOTSEDRAFT_72887 [Dothistroma septosporum
NZE10]
Length = 170
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 94/151 (62%), Gaps = 8/151 (5%)
Query: 101 MISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-- 158
MI++YL S +DH IHLLFSANRWE ++ + +GT +++DRY YSG +S+AK
Sbjct: 1 MINSYLQGASQQEDHAIHLLFSANRWEAAEKIKQLITSGTDVVIDRYYYSGCVYSAAKRN 60
Query: 159 -GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLR- 216
+D+ WC+ E+GL PD L+LD+ E AA RGG+G ERYE + Q +V + +R
Sbjct: 61 PAMDLAWCRNMEVGLPRPDLCLFLDVSAEDAARRGGFGTERYEKQDLQNRVRDLFAEMRI 120
Query: 217 ----DSSWKIIDACQSIEDVEKQLKEIVLDQ 243
+ +IDA S++ V +++IV+++
Sbjct: 121 HPDENEDMVVIDAGGSMDAVHDAIQQIVIER 151
>gi|300701613|ref|XP_002994999.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
gi|239603498|gb|EEQ81328.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
Length = 199
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 7/195 (3%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
VV EGLD+ GK++ C + L+ L FPDR++ G++++ YL + +L +
Sbjct: 2 FVVFEGLDKSGKSTTCDSVYKKLKELDIHTTQMHFPDRSSITGEILNKYLLGKVNLTNEA 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
HLLFSA+R++K++ +E ++G L+ DRYS+SG+ FS AKGID+ W E L PD
Sbjct: 62 THLLFSADRYQKKNFIEKTSRSG-ILLCDRYSWSGICFSHAKGIDLGWAVETERLLPKPD 120
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI--IDACQSIEDVEK 234
+L+ +R +G E E EFQ K A+ Y +RD + IDA +S+ ++
Sbjct: 121 ITFFLEADVNVLMKRHNWGDEILETREFQLKAAEAYLQMRDYVKNLIKIDATKSVAEI-- 178
Query: 235 QLKEIVLDQVTACKK 249
+IV+D + +K
Sbjct: 179 --TDIVVDTIIKFQK 191
>gi|387594290|gb|EIJ89314.1| thymidylate kinase [Nematocida parisii ERTm3]
gi|387595036|gb|EIJ92663.1| thymidylate kinase [Nematocida parisii ERTm1]
Length = 195
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
VV+EG+DR GK+S +L + L G S ++ +P+R G++IS LS
Sbjct: 5 FVVVEGIDRSGKSSLIKKLENSLISQGISTKVLNYPNRNNLTGKLISEILSGHRAFPKEV 64
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
HLLFSANRWE + ++E L ++ DRY SG ++S A GI E+ A + G+ PD
Sbjct: 65 THLLFSANRWEDKELLE--LSDYNVILCDRYVLSGQSYSIANGIPKEFAFASDKGIKLPD 122
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD 217
L+LD+ PE AA R GYG E YE EFQ+KV Y ++D
Sbjct: 123 LTLFLDVSPEIAATREGYGEEVYEKKEFQQKV---YTTMKD 160
>gi|321474134|gb|EFX85100.1| hypothetical protein DAPPUDRAFT_46657 [Daphnia pulex]
Length = 149
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPE 169
++DDH IHLLFSANRWE ++ L+ T +IVDRYS SG+AFS+AK +D+ WC+ E
Sbjct: 3 YIDDHAIHLLFSANRWELLPDIKKLLQKSTNIIVDRYSNSGIAFSAAKPNMDLRWCQQSE 62
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
GLL PD V++L I +A RG Y ERYE+LE Q+ V Y L+D + +++DA +S+
Sbjct: 63 SGLLKPDLVIFLGIDLVEAQTRGQY--ERYENLEMQKVVRSNYLKLQDETCRVVDASRSM 120
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V + + +V + + LW
Sbjct: 121 EEVGRDVCRLVQEALDNITPDSALKQLW 148
>gi|156088733|ref|XP_001611773.1| thymidylate kinase [Babesia bovis T2Bo]
gi|154799027|gb|EDO08205.1| thymidylate kinase, putative [Babesia bovis]
Length = 237
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 7/186 (3%)
Query: 60 LEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT-IH 118
EG+DR GK++Q L L G +L +FP T G+M++ +L++ + IH
Sbjct: 18 FEGIDRSGKSTQVKLLSQKLTDKGIDHKLLKFPCYETECGKMLATHLASHGAVRSRRCIH 77
Query: 119 LLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGLLAPDS 177
LLFSANRWE + A L +GT +IVDRY++SGVA+S A+ + EWC + GLL+PD
Sbjct: 78 LLFSANRWEMMKEIVATLVSGTHIIVDRYAFSGVAYSVGAENLSYEWCITADDGLLSPDL 137
Query: 178 VLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEK 234
V+YLD P +A R +G ERYE LE R+V + + L W DA E + K
Sbjct: 138 VVYLDNPAAVSAARSNFGDERYEQEGKLEAVRRVYEEFSSL--PYWHKYDATLPQEVLSK 195
Query: 235 QLKEIV 240
+ E V
Sbjct: 196 AIYERV 201
>gi|449691080|ref|XP_004212556.1| PREDICTED: thymidylate kinase-like, partial [Hydra magnipapillata]
Length = 119
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 79/110 (71%)
Query: 140 TTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERY 199
TL+VDRY+YSGVAF+SAKG D+ WCK +IGL PD+V Y++I E A+ RG YG ERY
Sbjct: 1 VTLVVDRYAYSGVAFTSAKGYDMLWCKNCDIGLPRPDAVYYMNIDIEDASVRGDYGCERY 60
Query: 200 EHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKK 249
E +FQ+KV +C+Q L++ SW +IDA +SI+ + K L E VL + C+
Sbjct: 61 EVSDFQKKVQECFQNLKEPSWNVIDARESIDCIHKTLCESVLKTIGECEN 110
>gi|302657864|ref|XP_003020643.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517]
gi|291184499|gb|EFE40025.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517]
Length = 130
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 101 MISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA--- 157
MI+ YL + LDDH +HLLFSANRWE + + +++G T+IVDRYSYSG +S+A
Sbjct: 1 MINQYLRGEIQLDDHAVHLLFSANRWEAAAQIRQDIESGITVIVDRYSYSGAVYSAAKEN 60
Query: 158 KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY 212
K + ++W PE+GL PD +L+I E AA RGGYG ERYE + Q+KV + +
Sbjct: 61 KELQLDWAWRPEVGLPRPDIWFFLNISIEVAAARGGYGTERYETVNLQKKVGKLF 115
>gi|260909078|gb|ACX54176.1| chimeric thymidine kinase/thymidylate kinase [White spot syndrome
virus]
Length = 262
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
LVVLEG DRCGK++Q LL+ + E FPDR++ G++I+ YL+ + LDDH
Sbjct: 140 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIELDDHA 199
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID-IEWCKAPEIGLLAP 175
HLLFSANRWE S ++ L G +++DRY YSG+ FS A+G+D +EWC A + GL P
Sbjct: 200 AHLLFSANRWEVCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVDTVEWCSASDEGLPQP 259
Query: 176 DSV 178
D V
Sbjct: 260 DLV 262
>gi|45198887|ref|NP_985916.1| AFR369Wp [Ashbya gossypii ATCC 10895]
gi|44984916|gb|AAS53740.1| AFR369Wp [Ashbya gossypii ATCC 10895]
gi|374109147|gb|AEY98053.1| FAFR369Wp [Ashbya gossypii FDAG1]
Length = 213
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 102/160 (63%), Gaps = 7/160 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-H 111
+RG L+++EGLDR GK++Q L E L V+L RFP R T VG ++ YL ++
Sbjct: 2 TRGRLILIEGLDRVGKSTQVGVLA---ERLQPHVQLMRFPARDTPVGALLDRYLRDRDFE 58
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI---DIEWCKAP 168
L D T HLLF+ANRWE + +EA L AG +I+DRY YSG A+S+AK + D+EWC A
Sbjct: 59 LADQTAHLLFAANRWECAARIEAALAAGQHVILDRYVYSGAAYSAAKAVPRMDLEWCAAA 118
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV 208
+ GL PD L+L AA+R GYG ERYE +FQ +V
Sbjct: 119 DRGLPKPDLTLFLTQGAAAAAQRAGYGAERYEQPDFQERV 158
>gi|405953891|gb|EKC21461.1| Thymidylate kinase [Crassostrea gigas]
Length = 135
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 8/129 (6%)
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
R M+ L+AGTTLIVDRY+YSG G I+WCK P+ GL PD VLYL++ P+ A
Sbjct: 10 RPKMKVLLEAGTTLIVDRYAYSG-------GFSIDWCKQPDCGLPRPDLVLYLNLRPDAA 62
Query: 189 AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
A+RG +G ERYE +FQ KV + + +L++S WK IDA ++ +D+ +L EIVL+ + +
Sbjct: 63 AKRGNFGNERYEQTDFQAKVMKNFHLLKESYWKEIDADKTEDDLAAELGEIVLNCIPTVR 122
Query: 249 KGKPFSLLW 257
+ +P LW
Sbjct: 123 E-RPIEKLW 130
>gi|378756845|gb|EHY66869.1| thymidylate kinase [Nematocida sp. 1 ERTm2]
Length = 198
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+ VV+EG+DR GK+S + L + L G ++ +P+R G +IS L+
Sbjct: 3 KSLFVVIEGIDRSGKSSLAAALKTSLASHGVVADVISYPNRKNMTGMLISQVLAGDKEFI 62
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
HLLFSANRWE + +E ++ ++ DRY SG+++S A GI E+ A +
Sbjct: 63 KEATHLLFSANRWEDKERIENLMQPCEYTRVILCDRYILSGISYSIANGIPKEFAMASDK 122
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIE 230
G+ PD ++LD+ PE A+ R G+G E YE EFQ+KV + L D + ++ E
Sbjct: 123 GMTLPDLTIFLDVSPETASARAGFGLEIYEKKEFQQKVYTEMKCLLDKYRHTVIPSETQE 182
Query: 231 DVEKQLKEIVLDQV 244
++ + + +LD +
Sbjct: 183 EMHRIALKRILDLI 196
>gi|269860112|ref|XP_002649779.1| thymidylate kinase [Enterocytozoon bieneusi H348]
gi|220066838|gb|EED44309.1| thymidylate kinase [Enterocytozoon bieneusi H348]
Length = 205
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 18/209 (8%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---- 106
I ++ +VLEG+DR GKT+ C+ + + + + FPDRTT+ G+ I +L
Sbjct: 3 IQNKNLFIVLEGIDRSGKTTLCNLISKKINAVK-----FNFPDRTTNTGKKIDNFLKQYC 57
Query: 107 SNQSHLDDHT-----IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID 161
N ++ D+ +HLLF NR EK + L+ +I DRYS SG+ +S +KG++
Sbjct: 58 ENVENIFDNKEINEKLHLLFRDNRLEKIPFILKTLE-NHDIICDRYSMSGIVYSISKGLN 116
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK 221
+W K E L PD +LD+ PE + +R +G E ++ +EFQ+KV + Y L++ +
Sbjct: 117 EKWVKDSEKDLPIPDITFFLDVNPEISFKRQDFGNEIHDTIEFQKKVYENY--LKNKDYM 174
Query: 222 IIDACQSIEDVEKQ-LKEIVLDQVTACKK 249
I +IE++ + L I ++ CK+
Sbjct: 175 IFIKNDTIENMLNEILNYINRFKINRCKR 203
>gi|166796829|gb|AAI59429.1| Dtymk protein [Rattus norvegicus]
Length = 124
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 71/90 (78%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+QC RL++ L GH EL RFP+R+T +G+++S+YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLI 143
DH++HLLFSANRWE+ +++AKL G TL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKAKLNQGVTLF 94
>gi|355685021|gb|AER97593.1| deoxythymidylate kinase [Mustela putorius furo]
Length = 129
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 88/130 (67%), Gaps = 5/130 (3%)
Query: 132 MEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAE 190
++ KL G TL+VDRY++SGVAF+SAK ++WCK P++GL PD V++L + +AA
Sbjct: 1 IKKKLGQGITLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLVVFLQLGLAEAAA 60
Query: 191 RGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTAC 247
RG +G ERYE+ FQ + +C+ Q++ D + WK++DA +SIEDV K++ + +D + A
Sbjct: 61 RGEFGRERYENGNFQERALRCFHQLMADKTLNWKMVDASKSIEDVHKEIHALSVDTIQAV 120
Query: 248 KKGKPFSLLW 257
+ +P LW
Sbjct: 121 TE-RPLGELW 129
>gi|387866116|ref|YP_003358216.2| thymidylate kinase [Anguillid herpesvirus 1]
gi|387866024|gb|ADA57840.2| thymidylate kinase [Anguillid herpesvirus 1]
Length = 221
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPD-RTTSVGQMI-SAYLSNQSHL 112
G L+ +EG DR GK++ C+RL E S+ FP T G ++ +A+ +
Sbjct: 23 GRLIAVEGCDRTGKSTLCARLA---ETWPESITAVHFPKMEGTFTGSVLRTAFKTPFVRS 79
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ +HLLFSANRWE + A+L G ++ DRY SG+A+S KG+D EWC+ P+ L
Sbjct: 80 NPRIMHLLFSANRWELMDFIGAELAKGKIVVCDRYFGSGLAYSMVKGLDQEWCEGPDRRL 139
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGER-YEHLEFQRKVAQCYQML-RDSSWKIIDA 225
+ PD+ +YLD P +R +G + +E EFQ K+ Y L R+ W IDA
Sbjct: 140 IQPDATIYLDAPLSALMKRKDWGADTVFETEEFQSKLIPIYDKLAREKRWTRIDA 194
>gi|161529215|ref|YP_001583041.1| thymidylate kinase [Nitrosopumilus maritimus SCM1]
gi|160340516|gb|ABX13603.1| thymidylate kinase [Nitrosopumilus maritimus SCM1]
Length = 193
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ +L+ FPD T +G+ I YL +
Sbjct: 2 IIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYKTHIGKEIRQYLDGKRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L SANRWEK ++ + + LI++RY +S + + A G+ +W ++ + GL D
Sbjct: 62 IHCLLSANRWEKLEQIKTAQEKNSVLIMNRYYHSNLVYGLANGMKEKWLESLDAGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQML-RDSSWKIIDACQSIEDVEK 234
V+ LD+ +++ R +++E + EF RK+++ Y+ + WKIIDA +S ++V +
Sbjct: 122 LVILLDVTQKESFNRQKTNRDKFEKNEEFLRKISRIYKTTAKKKRWKIIDATKSKQEVHE 181
Query: 235 QL 236
++
Sbjct: 182 EI 183
>gi|408405230|ref|YP_006863213.1| thymidylate kinase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365826|gb|AFU59556.1| putative thymidylate kinase [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 197
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++G ++VLEG D+ GKT+Q L L+ LG + FPD TT +G I A+L +
Sbjct: 3 TKGKIIVLEGTDKAGKTTQSRMLAEALKVLGKVCVIIDFPDYTTPIGTEIRAFLDGRRDY 62
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
HLLFSANRWEK+ +E+ ++ GT ++++RY S + + +A G+D W + GL
Sbjct: 63 PAEVKHLLFSANRWEKKKEIESMVENGTIVVMNRYWQSNLIYGAANGMDTSWLLNLDKGL 122
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVA-----QCYQMLRDSSWKIIDACQ 227
D V+ + + P + +R E + E ++A + + WK+ID +
Sbjct: 123 PEEDLVIIILVNPSISTKR----AESQDAFESNPQLAAWAYKNYLKFAKQFGWKVIDGSK 178
Query: 228 SIEDVEKQLKEIV 240
S + V +++ +IV
Sbjct: 179 SKDQVHQEVMKIV 191
>gi|386875405|ref|ZP_10117579.1| dTMP kinase [Candidatus Nitrosopumilus salaria BD31]
gi|386806804|gb|EIJ66249.1| dTMP kinase [Candidatus Nitrosopumilus salaria BD31]
Length = 193
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ +L+ FPD T +G+ I YL
Sbjct: 2 IIVIEGGDQAGKLTQSTMLEKSLKKRKIKTKLFHFPDYKTPIGKEIRQYLDGNRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L SANRWEK + A + LI++RY +S + + A G+ W + + GL D
Sbjct: 62 IHCLLSANRWEKLDEILAAQDKNSVLIMNRYYHSNLIYGIANGMKQSWLENLDAGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQ-MLRDSSWKIIDACQSIEDVEK 234
V+ LD+ +++ +R +++E + EF RK+++ Y+ + WKIIDA +S E+V +
Sbjct: 122 LVILLDVTQKESFQRQKTNRDKFEKNEEFLRKISKIYRATAKKKHWKIIDASKSKEEVHE 181
Query: 235 QLKEI 239
++ +I
Sbjct: 182 EIMKI 186
>gi|345790843|ref|XP_851996.2| PREDICTED: uncharacterized protein LOC609615 [Canis lupus
familiaris]
Length = 434
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 88/131 (67%), Gaps = 5/131 (3%)
Query: 131 MMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAA 189
+++ KL G TLIVDRY++SGVAF+SAK ++WCK P++GL PD V++L + +AA
Sbjct: 304 LIKKKLSQGITLIVDRYAFSGVAFTSAKEDFSLDWCKQPDVGLPKPDLVVFLQLRLAEAA 363
Query: 190 ERGGYGGERYEHLEFQ-RKVAQCYQMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTA 246
RG +G ERYE +FQ R + + +Q++ D + WK++DA +SIE V K++ + +D + A
Sbjct: 364 TRGEFGRERYEDGKFQERALRRFHQLMADQTVNWKMVDASKSIEAVHKEIHALSVDTMQA 423
Query: 247 CKKGKPFSLLW 257
+ +P LW
Sbjct: 424 AAQ-RPLGELW 433
>gi|407463289|ref|YP_006774606.1| thymidylate kinase [Candidatus Nitrosopumilus koreensis AR1]
gi|407046911|gb|AFS81664.1| thymidylate kinase [Candidatus Nitrosopumilus koreensis AR1]
Length = 193
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ +L+ FPD TT VG+ I YL +
Sbjct: 2 IIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYTTPVGKEIRKYLDGKRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L +ANRWEK + + + LI++RY +S + + A G+ +W + + GL D
Sbjct: 62 IHCLLAANRWEKLDQILDAQEKNSVLIMNRYYHSNLIYGLANGMKQKWLENLDAGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQ-MLRDSSWKIIDACQSIEDVEK 234
V+ LD+ +++ R +++E + EF RK+++ Y+ + WKIIDA + ++V +
Sbjct: 122 LVILLDVTQKESFNRQKTNRDKFEKNKEFLRKISKIYKNTAKKKHWKIIDASKPKQEVHE 181
Query: 235 QL 236
++
Sbjct: 182 EI 183
>gi|126649231|ref|XP_001388288.1| thymidylate kinase [Cryptosporidium parvum Iowa II]
gi|126117126|gb|EAZ51226.1| thymidylate kinase [Cryptosporidium parvum Iowa II]
Length = 166
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Query: 101 MISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKG 159
M+ YL + HLLF+ANRWE + ++ L+ G ++ DRYS+SG+A+SS A
Sbjct: 1 MLDGYLGKSIKMAPQVSHLLFTANRWELNNYIKENLENGIDVVCDRYSFSGIAYSSGAIN 60
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS 219
+D EWCK+ E GL++PD V++L++ + ++ R G+G E YE++ Q V + YQ + S
Sbjct: 61 LDFEWCKSREQGLISPDIVVFLEVNLDLSSTRSGFGVEIYENISDQISVRKVYQKFSNYS 120
Query: 220 -WKIIDACQS 228
W+ I+A QS
Sbjct: 121 FWRNINASQS 130
>gi|351713265|gb|EHB16184.1| Thymidylate kinase [Heterocephalus glaber]
Length = 216
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 86/133 (64%), Gaps = 5/133 (3%)
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGLLAPDSVLYLDIPPEK 187
R +++ KL+ G TL+VDRY++SGVAF+SAK ++WCK P++GL PD +L+L +
Sbjct: 84 RPLIKEKLRQGVTLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLAD 143
Query: 188 AAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQV 244
A+ RG +G ERYE FQ +V + Q++RDS+ WK++DA +SIE V +++ + +
Sbjct: 144 ASTRGEFGRERYEEKTFQERVLGSFQQLMRDSTLNWKVVDASKSIEAVHEEICSLSEAAI 203
Query: 245 TACKKGKPFSLLW 257
+ +P LW
Sbjct: 204 LGAAR-RPLGELW 215
>gi|226471244|emb|CAX70703.1| Thymidylate kinase [Schistosoma japonicum]
Length = 132
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG VV EG+++CGK +Q L L + G L FPD++T VG++++ Y + L
Sbjct: 7 RGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYFDGKLQL 66
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GIDIEWCKA 167
+ H HLL ANRWE++ + LKAG +++VDRYSYSG+A+++AK D +WC++
Sbjct: 67 ELHASHLLHIANRWERQDEISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADWKWCRS 126
Query: 168 PEIGLL 173
E GLL
Sbjct: 127 VEYGLL 132
>gi|67590947|ref|XP_665517.1| thymidylate kinase [Cryptosporidium hominis TU502]
gi|54656244|gb|EAL35286.1| thymidylate kinase [Cryptosporidium hominis]
Length = 165
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 101 MISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKG 159
M+ YL + HLLF+ANRWE + ++ L+ G ++ DRYS+SG+A+SS A
Sbjct: 1 MLDGYLGKSIKMAPQVSHLLFTANRWELNNYIKENLENGIDVVCDRYSFSGIAYSSGAIN 60
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS 219
+D EWCK+ E GL++PD V++L++ ++ R G+G E YE++ Q V + YQ + S
Sbjct: 61 LDFEWCKSREQGLISPDIVVFLEVNLGLSSTRSGFGVEIYENISDQISVRKVYQKFSNYS 120
Query: 220 -WKIIDACQS 228
W+ I+A QS
Sbjct: 121 FWRNINASQS 130
>gi|149037468|gb|EDL91899.1| deoxythymidylate kinase (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 80
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 62/75 (82%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+QC RL++ L GH EL RFP+R+T +G+++S+YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEK 128
DH++HLLFSANRWE+
Sbjct: 65 DHSVHLLFSANRWEQ 79
>gi|340345680|ref|ZP_08668812.1| Thymidylate kinase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520821|gb|EGP94544.1| Thymidylate kinase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 193
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ + FPD T VG+ I+ YL+ +
Sbjct: 2 IIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPVGKEIAKYLNCKRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L +ANRWEK + + A + +I++RY +S + + A G+ +W K + GL D
Sbjct: 62 IHCLLAANRWEKLNEILAAQSKNSIVIMNRYYHSNLIYGLANGMKSKWLKNLDDGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQML-RDSSWKIIDACQSIEDVEK 234
V+ LD+ ++ R +++E + EF RK+++ Y+ + + WKIIDA +S ++V +
Sbjct: 122 LVILLDVTQRESFRRKKTNRDKFEKNEEFLRKISKIYRTIAKKEYWKIIDASKSKQEVHE 181
Query: 235 QL 236
+
Sbjct: 182 NI 183
>gi|348577655|ref|XP_003474599.1| PREDICTED: thymidylate kinase-like isoform 2 [Cavia porcellus]
Length = 80
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 61/75 (81%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+S L GH EL RFPDR+T +G+++S+YL +S L+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVSALCAAGHRAELLRFPDRSTEIGKLLSSYLEKKSELE 64
Query: 114 DHTIHLLFSANRWEK 128
DH++HLLFSANRWE+
Sbjct: 65 DHSVHLLFSANRWEQ 79
>gi|393794874|ref|ZP_10378238.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 193
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ + FPD T +G+ IS YL+ +
Sbjct: 2 IIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPIGKEISKYLNGKRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L +ANRWEK + + + LI++RY S + + A G++ +W + + GL D
Sbjct: 62 IHCLLAANRWEKLNDILNAQSKNSVLIMNRYYQSNLIYGLANGMNRKWLENLDSGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQML-RDSSWKIIDACQSIEDVEK 234
V+ LD+ ++ R +++E + EF R +++ Y+ + + +WKIIDA + ++V K
Sbjct: 122 LVILLDVSQTESFRRKKTNRDKFEKNEEFLRNISKIYRKIAKKENWKIIDASKPKQEVHK 181
Query: 235 QL 236
+
Sbjct: 182 NI 183
>gi|329766083|ref|ZP_08257642.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137354|gb|EGG41631.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 193
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ + FPD T +G+ IS YL+ +
Sbjct: 2 IIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPIGKEISKYLNGKRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L +ANRWEK + + + +I++RY S + + A G++ +W + + GL D
Sbjct: 62 IHCLLAANRWEKLNDIINAQSKNSVIIMNRYYQSNLIYGLANGMNRKWLENLDSGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQML-RDSSWKIIDACQSIEDVEK 234
V+ LD+ ++ R +++E + EF R +++ Y+ + + +WKIIDA + ++V K
Sbjct: 122 LVILLDVSQTESFRRKKTNRDKFEKNEEFLRNISKIYRKIAKQENWKIIDASRPKQEVHK 181
Query: 235 QL 236
+
Sbjct: 182 DI 183
>gi|361130088|gb|EHL01942.1| putative Thymidylate kinase [Glarea lozoyensis 74030]
Length = 242
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 46/193 (23%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGA +VLEGLDR GKT+Q L L GH+V RFP A++ Q
Sbjct: 58 SRGAFIVLEGLDRSGKTTQVKLLCDKLYSEGHNVRTLRFP-----------AWIKEQ--- 103
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
+ G T++ DRY YSG+ +S+AK + ++W ++P+
Sbjct: 104 -----------------------ISRGYTIVCDRYYYSGMVYSAAKKNPTLSLQWARSPD 140
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML------RDSSWKII 223
+GL PD VL+LD+ E+ +R GYG E+YE E Q V + + L + +I
Sbjct: 141 VGLPRPDRVLFLDLTAEEVEKRLGYGEEKYEKRELQETVREVFLGLLVRGEEESTDMVVI 200
Query: 224 DACQSIEDVEKQL 236
DA +E+V L
Sbjct: 201 DAGHPVEEVASTL 213
>gi|414589778|tpg|DAA40349.1| TPA: hypothetical protein ZEAMMB73_168374 [Zea mays]
Length = 482
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 54/58 (93%)
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPE 186
+++ME+KL +GTTLIVDRYSYSGVAFS+AKG+DIEWCKAPE GL+APD V+YLD+ PE
Sbjct: 414 KALMESKLLSGTTLIVDRYSYSGVAFSAAKGLDIEWCKAPENGLIAPDLVIYLDVQPE 471
>gi|221105979|ref|XP_002169331.1| PREDICTED: thymidylate kinase-like [Hydra magnipapillata]
Length = 78
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA VVLEG D+ GK++QC L+ YL LG ELWRFP+R+T++GQ+I+ Y++ ++ L
Sbjct: 3 RGAFVVLEGCDKSGKSTQCRLLVDYLNSLGKKTELWRFPERSTAIGQIINGYITKKNELH 62
Query: 114 DHTIHLLFSANRWE 127
D +HL+FSANRWE
Sbjct: 63 DKAVHLMFSANRWE 76
>gi|349803555|gb|AEQ17250.1| putative deoxythymidylate kinase (thymidylate kinase) [Pipa
carvalhoi]
Length = 80
Score = 99.8 bits (247), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG DR GK++Q RL+ L+ G+ E RFP+RTT +G++I +YL +S+L+
Sbjct: 1 RGALIVLEGADRAGKSTQARRLVEALKERGYRAEGLRFPERTTEIGRLIGSYLEKKSNLE 60
Query: 114 DHTIHLLFSANRWEKRSMME 133
DHTIHLLFSANRWE+ +++
Sbjct: 61 DHTIHLLFSANRWEQVPLIK 80
>gi|119591692|gb|EAW71286.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_d [Homo
sapiens]
Length = 83
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 60/75 (80%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEK 128
DH++HLLFSANRWE+
Sbjct: 65 DHSVHLLFSANRWEQ 79
>gi|12963517|ref|NP_075625.1| thymidylate kinase isoform 2 [Mus musculus]
gi|1836040|gb|AAB46837.1| thymidylate kinase [Mus sp.]
gi|12848397|dbj|BAB27937.1| unnamed protein product [Mus musculus]
gi|12859415|dbj|BAB31646.1| unnamed protein product [Mus musculus]
gi|12859652|dbj|BAB31722.1| unnamed protein product [Mus musculus]
gi|47124402|gb|AAH69902.1| Deoxythymidylate kinase [Mus musculus]
gi|74141414|dbj|BAE35986.1| unnamed protein product [Mus musculus]
gi|148707984|gb|EDL39931.1| deoxythymidylate kinase, isoform CRA_b [Mus musculus]
Length = 80
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 61/75 (81%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++++YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEK 128
DH++HLLFSANRWE+
Sbjct: 65 DHSVHLLFSANRWEQ 79
>gi|407465667|ref|YP_006776549.1| thymidylate kinase [Candidatus Nitrosopumilus sp. AR2]
gi|407048855|gb|AFS83607.1| thymidylate kinase [Candidatus Nitrosopumilus sp. AR2]
Length = 200
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q + L L+ +L+ FPD T +G+ I YL +
Sbjct: 2 IIVIEGGDQAGKLTQSTLLEKALKKQKIKTKLFHFPDYDTPIGKEIRKYLDGKRKFPPQV 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L +ANRWEK + A + + LI++RY +S + + A G+ +W + + GL D
Sbjct: 62 IHCLLAANRWEKFDEILAAEEKNSVLIMNRYYHSNLVYGLANGLKQKWLETLDDGLPKAD 121
Query: 177 SVLYLDIPPEKAAERGGYGG-------ERYE-HLEFQRKVAQCYQML-RDSSWKIIDACQ 227
V+ LD+ +++ R +++E + +F RK++Q Y+ + WKIIDA +
Sbjct: 122 LVILLDVTQKESFSRSPQNQRGKIMKRDKFEKNKQFSRKISQIYRTTAKKKHWKIIDASK 181
Query: 228 SIEDVEKQL 236
++ +++
Sbjct: 182 PKLEIHEEI 190
>gi|167042320|gb|ABZ07049.1| putative Thymidylate kinase [uncultured marine crenarchaeote
HF4000_ANIW97J3]
Length = 292
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++ +EGLD+ GK +Q L+ L + ++ FPD +T +G+ I +LS + +
Sbjct: 102 IIAIEGLDQAGKKTQTEMLVKALRRIKIKTAVFSFPDYSTIIGKEIKNHLSGKRNFPPEI 161
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
IH L++ANR EK ++ + L+++RY +S + + A G+ +W + E GL D
Sbjct: 162 IHYLYAANRLEKLEEIQKASSKNSVLVMNRYYHSNLVYGIANGLKEKWLQKLEEGLPKAD 221
Query: 177 SVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCYQML-RDSSWKIIDACQSIEDVEK 234
V+ LD + + R +R+E + F +K+++ Y+ L + WK++ + + ++ K
Sbjct: 222 LVIVLDASQDDSFSRKKSKRDRFEKNKNFSKKISRIYRRLAKKHRWKMV-SSDTKQNTHK 280
Query: 235 QLKEIVLDQV 244
++ +I+ ++
Sbjct: 281 EIMKIISKKI 290
>gi|70951454|ref|XP_744966.1| thymidylate kinase [Plasmodium chabaudi chabaudi]
gi|56525131|emb|CAH77574.1| thymidylate kinase, putative [Plasmodium chabaudi chabaudi]
Length = 129
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 136 LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGY 194
L GT ++ DRY+YSGVA+SS A + EWC P+ GL+ PD+V YL++PP A R Y
Sbjct: 7 LINGTWVVCDRYAYSGVAYSSGALKLPKEWCMNPDKGLIKPDAVCYLNLPPNHAQNRSEY 66
Query: 195 GGERYEHLEFQRKVAQCYQMLRDSS-WKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPF 253
G E YE E Q+++ + Y+ + W IDA +SI+++ + E + + ++ K F
Sbjct: 67 GKEIYEKFEVQKRIYEAYEHFSNEDYWINIDATKSIQEIHNTIVEEISKKCSS--KNTQF 124
Query: 254 SLLWS 258
LWS
Sbjct: 125 EYLWS 129
>gi|18978102|ref|NP_579459.1| thymidylate kinase [Pyrococcus furiosus DSM 3638]
gi|397652623|ref|YP_006493204.1| thymidylate kinase [Pyrococcus furiosus COM1]
gi|23821777|sp|Q8U071.1|KTHY_PYRFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|18893897|gb|AAL81854.1| thymidylate kinase (tmk) [Pyrococcus furiosus DSM 3638]
gi|393190214|gb|AFN04912.1| thymidylate kinase [Pyrococcus furiosus COM1]
Length = 210
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 16/196 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +VLEG+D GKT+Q L + E G V L + P T G++I + S +D
Sbjct: 3 RGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPT-DTEFGKIIRKLVLEGSIID 61
Query: 114 DHTIHL-----LFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I L LF+A+R E + ++E L+ G +I DRY YS +A+ A+G+++EW
Sbjct: 62 GGRISLEAEALLFAADRAEHVKKIIEPALREGKVVISDRYFYSSLAYQWARGLNLEWL-- 119
Query: 168 PEIGLLA--PDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSW 220
EI A PD + LDIPP + +R + E + Q KV + Y L
Sbjct: 120 IEINKFAPHPDIAILLDIPPREGIKRIKKRSSQTEFDKLFKLQEKVRENYIKLAKMFDEI 179
Query: 221 KIIDACQSIEDVEKQL 236
KIIDA +S+E+V +++
Sbjct: 180 KIIDATKSVEEVHREI 195
>gi|82915445|ref|XP_729074.1| thymidylate kinase [Plasmodium yoelii yoelii 17XNL]
gi|23485911|gb|EAA20639.1| Thymidylate kinase [Plasmodium yoelii yoelii]
Length = 146
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +V EG+DR GK++Q + YL+ V+ FP+R T++G++I+ YL +S
Sbjct: 14 RGNFIVFEGVDRSGKSTQSKLFVEYLKNNNIQVQHLCFPNRETTIGKIITNYLKMESTFS 73
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA 157
+ TIHLLFSANRWE ++ L G +I DR YSGV +SS
Sbjct: 74 NETIHLLFSANRWEMMDQIKNLLINGVWVICDRXXYSGVXYSSG 117
>gi|302795085|ref|XP_002979306.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii]
gi|300153074|gb|EFJ19714.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii]
Length = 402
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 6/81 (7%)
Query: 86 VELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVD 145
++LW P RT+ + ++ +L + LDD +H+LFSANRW+ + ME KL AGTTL+VD
Sbjct: 1 MKLW--PARTSRLRCLL--FLGRGADLDDRAVHILFSANRWDLK--MEKKLMAGTTLVVD 54
Query: 146 RYSYSGVAFSSAKGIDIEWCK 166
R+SYSGVAFS+AKG+D+EWCK
Sbjct: 55 RFSYSGVAFSAAKGLDLEWCK 75
>gi|189210088|ref|XP_001941376.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977469|gb|EDU44095.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 136
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 76/166 (45%), Gaps = 55/166 (33%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+V EGLDR GK++QC +L+ L+ G V RFP
Sbjct: 2 ARGKLIVFEGLDRAGKSTQCQKLVEDLQNDGVKVRHMRFP-------------------- 41
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
DRY YSG +S+AK + +EWC+ PE
Sbjct: 42 --------------------------------DRYYYSGCVYSAAKQNPNMSLEWCRNPE 69
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML 215
+GL PD ++LDI E AA+RGGYG E+YE + Q +V ++ L
Sbjct: 70 LGLPRPDLCIFLDISAEDAAKRGGYGAEKYEKKDMQDRVRVLFETL 115
>gi|71394067|gb|AAZ32106.1| thymidilate kinase [uncultured euryarchaeote Alv-FOS5]
Length = 212
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GK +Q L L+ GH V + FP+ +G+MI +L + LD T
Sbjct: 4 FIVFEGIDASGKETQAKLLAKALKKKGHKVYMVDFPNYKNPIGKMIKKFLDKKVELDVET 63
Query: 117 IHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
LL++A+R +E + + +A L +I DRY YS +A+ + G +I W + + L+ P
Sbjct: 64 RALLYAADRRYELKGITKA-LDDNKIVIADRYCYSNIAYQGSLGANISWLASLDATLVFP 122
Query: 176 DSVLYLDIPPEKAAERGGYGGERYE-HLEFQRKVAQCY-----------QMLRD-SSWKI 222
D V YLDIP +++ R +RYE EF +V + Y + +D + W
Sbjct: 123 DLVFYLDIPAKESLRRRT-RKDRYESKREFLERVRETYTNMATGNMRPFEKYKDYAEWIT 181
Query: 223 IDACQSIEDVEKQL 236
+D I+ + K++
Sbjct: 182 VDGTLPIDIIHKEI 195
>gi|171184628|ref|YP_001793547.1| dTMP kinase [Pyrobaculum neutrophilum V24Sta]
gi|170933840|gb|ACB39101.1| dTMP kinase [Pyrobaculum neutrophilum V24Sta]
Length = 204
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Query: 56 ALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
A V +EG+D GK++ SRL L + + E P +G++I + +D H
Sbjct: 2 AFVAIEGIDGSGKSTVISRLAEILPKVYTTREPSGGP-----IGRLIKEWALRGGTVDPH 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R E R +E K++ G +I +RY S +A+ A G+ +E+ K+ +
Sbjct: 57 VDALLFAADRIEHYRREVEPKVREGYIVISERYVESSIAYQGAAGVPLEFIKSINSLVPR 116
Query: 175 PDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
PD + LD+ PE A R G E+YE + F R+V + Y R+ + ++DA + E
Sbjct: 117 PDVTVILDVEPEVAISRVRQRGALEKYEQMAFLRRVREIYLARAREEGYPVVDAARPPEV 176
Query: 232 VEKQLKEIV 240
V +++ EIV
Sbjct: 177 VAREVAEIV 185
>gi|322695315|gb|EFY87125.1| thymidylate kinase [Metarhizium acridum CQMa 102]
Length = 206
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 80/227 (35%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGA +VLEGLDR GKT+Q L
Sbjct: 22 RGAFIVLEGLDRSGKTTQVKLL-------------------------------------- 43
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEI 170
E+R +++ + AGT +I DR+ +SG+ +S+AK + + W +APE
Sbjct: 44 -------------EQRDQIKSLVAAGTIVISDRFYHSGIVYSAAKLNPSLPLSWARAPER 90
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-------------QMLRD 217
GL PD VL+LD+ E A RGG+GGE YE E QR+V + + +ML +
Sbjct: 91 GLPRPDLVLFLDLDEETARARGGWGGELYEKAEMQRRVRELFWGLSMGGKDIQGQEMLAE 150
Query: 218 ------SSWK-------IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
+ W+ ++DA S+E+V ++ V +V ++G+
Sbjct: 151 LGGLDGAQWRQEEEDLVVVDAAGSVEEVADRIWATVEGRVAQVERGE 197
>gi|327399958|ref|YP_004340797.1| thymidylate kinase [Archaeoglobus veneficus SNP6]
gi|327315466|gb|AEA46082.1| Thymidylate kinase [Archaeoglobus veneficus SNP6]
Length = 190
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ +EG+D GKT+ L LE G+ V L + P + G+ I A L N+ +
Sbjct: 2 LIAIEGIDGVGKTTIAKFLKEELEKRGYEVVLLKEPT-NSEWGRKIKASL-NKRLSAEEE 59
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK------APEI 170
+ L ++ + LK G +I+DRY YS +A+ +A+G+D E K AP
Sbjct: 60 LELFILDRKYNVEHNILPALKQGKIVIMDRYYYSNIAYQAARGLDAERIKRINEEIAPR- 118
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGE---RYEHLEFQRKVAQCYQMLRDSSWKIIDACQ 227
PD V+ LD PPE ER GE +E E+ +KV + ++ L+D+ I+DA +
Sbjct: 119 ----PDIVILLDAPPEICLERIMERGEIPNSFEDPEYLKKVREIFKSLKDNVV-IVDASK 173
Query: 228 SIEDVEKQLKEIVLDQV 244
SI++V+K + IVL+++
Sbjct: 174 SIDEVKKDVLRIVLERI 190
>gi|315229969|ref|YP_004070405.1| thymidylate kinase [Thermococcus barophilus MP]
gi|315182997|gb|ADT83182.1| thymidylate kinase [Thermococcus barophilus MP]
Length = 209
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 15/209 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G +V+EG+D GK++Q L + E G++V L + P T+ G++I + +
Sbjct: 2 GIFIVIEGIDGAGKSTQAKLLAKWFEKRGYNVVLTKEPT-DTAFGKLIRKLVLTGGREGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E + ++E L+ G +I DRY YS +A+ A+G+D+EW
Sbjct: 61 IDGAKISHEAEALLFAADRAEHVKKLIEPSLRTGKVVISDRYFYSSLAYQWARGLDLEWL 120
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHL-EFQRKVAQCYQMLRD--SSW 220
+ PD V+ LD+P +++ +R G ++ + E Q+KV + Y L +
Sbjct: 121 INLNKFAIRPDLVILLDLPVKESMKRINGRQLKSEFDRIAELQKKVRENYLKLVEMFPEM 180
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTACKK 249
KI++A SIED+ + +V ++ K+
Sbjct: 181 KIVNALASIEDIHNDIVALVEHEILNKKE 209
>gi|284161466|ref|YP_003400089.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
gi|284011463|gb|ADB57416.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
Length = 199
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ +EG+D GKT+ L+ L+ G+ V ++ P + G+ I L + +
Sbjct: 2 LIAVEGIDGSGKTTIVRFLVEELKKRGYDVVAFKEPT-DSEYGKKIRQILKERKISPEEE 60
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ L + R+ + LK+G +I+DRY YS +A+ A G+DI K PD
Sbjct: 61 LKLFIKDREFNVRNNILPALKSGKVVIMDRYYYSTIAYQGALGLDIGKIKTLNEQFPKPD 120
Query: 177 SVLYLDIPPEKAAER--GGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEK 234
V+ LD+ PE A +R +R+E LE+ RKV + L+++ +IDA + IE+V++
Sbjct: 121 LVIILDVSPETALKRIKAKRKPDRFEDLEYLRKVRNIFLSLKNNIV-VIDAERDIEEVKR 179
Query: 235 QLKEIVLDQV 244
+ ++VL+ +
Sbjct: 180 DVLKVVLEHL 189
>gi|341581851|ref|YP_004762343.1| thymidylate kinase [Thermococcus sp. 4557]
gi|340809509|gb|AEK72666.1| thymidylate kinase [Thermococcus sp. 4557]
Length = 207
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
GA +V+EG+D GK++Q L + E GH V L + P T+ G++I + +
Sbjct: 2 GAFIVIEGIDGAGKSTQAKLLAEWFEEKGHEVVLTKEPT-DTAFGKLIRKLVLTGGKEGI 60
Query: 112 LDDHTIH-----LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E S +++ ++AG +I DRY YS +A+ A+G+D+EW
Sbjct: 61 IDGARISHEAEALLFAADRAEHVSKLIKPSVEAGKIVISDRYFYSSLAYQWARGLDLEWL 120
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQML--RDSSW 220
+ PD V+ LD+P +++ +R + E +E Q+KV + Y L R
Sbjct: 121 IDLNRFAVRPDLVILLDLPVKESMKRINGRSIKTEFDKIVELQKKVRENYLKLAERFPEM 180
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+I++A S+ED+ + +V
Sbjct: 181 RIVNALASVEDIHNDIVALV 200
>gi|14591458|ref|NP_143538.1| thymidylate kinase [Pyrococcus horikoshii OT3]
gi|6016461|sp|O59366.1|KTHY_PYRHO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|3258125|dbj|BAA30808.1| 205aa long hypothetical thymidylate kinase [Pyrococcus horikoshii
OT3]
Length = 205
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 12/198 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +VLEG+D GKT+Q L + E G+ V L + P + +G++I + +S +D
Sbjct: 2 RGYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPT-DSELGKLIRRIILEESVID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E + ++ L G +I DRY YS +A+ A+G+D+ W
Sbjct: 61 GSKISYEAEALLFAADRAEHVKKIILPALSEGKVVICDRYFYSSLAYQWARGLDLNWLIQ 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSWKI 222
PD + LD+P +++ R G E +E QRKV Y L + +I
Sbjct: 121 VNSFAPRPDLAILLDLPVKESLRRIKLRGTLTEFDKIVELQRKVRHNYLKLAEMFPEMRI 180
Query: 223 IDACQSIEDVEKQLKEIV 240
++A SIED+ + +V
Sbjct: 181 VNALSSIEDIHSDIVALV 198
>gi|375083214|ref|ZP_09730244.1| thymidylate kinase [Thermococcus litoralis DSM 5473]
gi|374742168|gb|EHR78576.1| thymidylate kinase [Thermococcus litoralis DSM 5473]
Length = 209
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 19/202 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G +VLEG+D GK++Q L + E G+ V L + P T+ G++I + +
Sbjct: 2 GMFIVLEGIDGAGKSTQAKMLAKWFENKGYEVVLTKEPT-DTAFGKLIRRLVLTGGKEGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E + ++E LKAG +I DRY YS +A+ A+G+D+EW
Sbjct: 61 IDGARISKEAEALLFAADRAEHVKKLIEPSLKAGKVVISDRYFYSSLAYQWARGLDLEWL 120
Query: 166 KAPEIGLLAP--DSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--S 218
+ AP D V+ LD+P +++ +R R E +E Q+KV + Y L +
Sbjct: 121 --INLNAFAPRADLVILLDLPVKESIKRINGRSIRSEFDKIVELQKKVRENYLKLAEKFE 178
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
+II+A +ED+ + +V
Sbjct: 179 EIRIINALAPVEDIHNDIVALV 200
>gi|305663476|ref|YP_003859764.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
gi|304378045|gb|ADM27884.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
Length = 203
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 19/196 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGH----SVELW--RFPDRTTSVGQMISAYLSN 108
G +VLEG+D GKT+ LL LE G+ + E W RF + S+G AY+
Sbjct: 7 GLFIVLEGIDGAGKTTIAKMLLDDLERNGYRTIYTFEPWTTRFVEDLKSLGMRRDAYIDA 66
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
+ D +H+ + ++E ++ G ++ DRY YS VA+ SA G+ ++W
Sbjct: 67 LIYAADRLVHV---------KEVIEPAIRDGYIVVCDRYFYSSVAYQSAMGVPMDWIITL 117
Query: 169 EIGLLAPDSVLYLDIPPEKA-AERGGYGGE--RYEHLEFQRKVAQCY-QMLRDSSWKIID 224
+ L PD +YLD+ PE A + GY YE RK + Y +M+R + I
Sbjct: 118 NMFALKPDLAIYLDVEPEIGIARKRGYKSRFPEYEEYGILRKAREIYLEMVRRNMLVYIY 177
Query: 225 ACQSIEDVEKQLKEIV 240
A + I DV + ++ IV
Sbjct: 178 AGRDIGDVYRDVRNIV 193
>gi|396497708|ref|XP_003845041.1| hypothetical protein LEMA_P003490.1 [Leptosphaeria maculans JN3]
gi|312221622|emb|CBY01562.1| hypothetical protein LEMA_P003490.1 [Leptosphaeria maculans JN3]
Length = 97
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 134 AKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAE 190
A L+AG T+IVDRY YSG +S+AK + +EW + PE+GL PD ++LDI E+AA+
Sbjct: 2 ADLRAGKTVIVDRYYYSGCVYSAAKQNPSLSLEWSRHPEVGLPRPDLCVFLDISAEEAAK 61
Query: 191 RGGYGGERYEHLEFQRKVAQCYQML 215
RGGYG E+YE E Q +V + ++M+
Sbjct: 62 RGGYGSEKYEKKEMQDRVRELFEMM 86
>gi|332157932|ref|YP_004423211.1| thymidylate kinase [Pyrococcus sp. NA2]
gi|331033395|gb|AEC51207.1| thymidylate kinase [Pyrococcus sp. NA2]
Length = 205
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +V EG+D GKT+Q L + G+ V L + P T G++I + S +D
Sbjct: 2 KGYFIVFEGIDGSGKTTQAKLLAKWFRDNGYEVLLTKEPT-DTEFGKLIRKLVLEGSIID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E + ++ L+ G +I DRY YS +A+ A+G+D+EW
Sbjct: 61 GSRISYEAEALLFAADRAEHVKKIILPALREGKIVICDRYLYSSLAYQWARGLDLEWL-- 118
Query: 168 PEIGLLAP--DSVLYLDIPPEKAAE--RGGYGGERYEHL-EFQRKVAQCYQMLRD--SSW 220
++ AP D V+ LD+P K+ E RG ++ L E QRKV + Y L +
Sbjct: 119 IKVNSFAPRADLVILLDLPITKSLERIRGRVIKTEFDKLVELQRKVRENYLKLAEMFPEI 178
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+++DA +IEDV + +V
Sbjct: 179 RVVDAMANIEDVHNNVVTLV 198
>gi|340503294|gb|EGR29897.1| thymidylate kinase, putative [Ichthyophthirius multifiliis]
Length = 131
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Query: 135 KLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGY 194
K+ +G T+I DRY+YSGV +S+AKG+++EWCK + GL PD + YL E ++RGG+
Sbjct: 6 KINSGITIISDRYAYSGVCYSTAKGLNVEWCKNCDKGLPQPDIIFYLYASEEVTSKRGGF 65
Query: 195 GGERYEHLEFQRKVAQCYQ-MLRDSSWKI-IDACQSIEDVEKQLKE 238
G E YE+ FQ+KV ++ +LR+ + ID +S+++V +++K+
Sbjct: 66 GEEIYENNSFQKKVRFEFEGLLRNEKNVVRIDTEKSLDEVHQEIKD 111
>gi|14520694|ref|NP_126169.1| thymidylate kinase [Pyrococcus abyssi GE5]
gi|13629362|sp|Q9V1E9.1|KTHY_PYRAB RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|5457910|emb|CAB49400.1| tmk thymidylate kinase (dTMP kinase) [Pyrococcus abyssi GE5]
gi|380741227|tpe|CCE69861.1| TPA: thymidylate kinase [Pyrococcus abyssi GE5]
Length = 205
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VVLEG+D GKT+Q L + E G V L + P T G++I + S +D
Sbjct: 2 RGYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPT-DTEFGRLIRELVLKNSIID 60
Query: 114 DHTIH-----LLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
I LLF+A+R E K+ ++ A L+ G +I DRY YS +A+ A+G+ +EW
Sbjct: 61 GSRISYEAEALLFAADRAEHVKKVILPA-LEKGKVVICDRYLYSSLAYQWARGLSLEWLM 119
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSWK 221
PD + LD+P +++ R G E LE QRKV Y L + +
Sbjct: 120 QINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKLLELQRKVRMNYLKLAEMFKEMR 179
Query: 222 IIDACQSIEDVEKQLKEIV 240
I++A S+E+V + + +V
Sbjct: 180 IVNAMASVEEVHEDIVALV 198
>gi|300871563|ref|YP_003786436.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
gi|404476534|ref|YP_006707965.1| thymidylate kinase [Brachyspira pilosicoli B2904]
gi|431807687|ref|YP_007234585.1| thymidylate kinase [Brachyspira pilosicoli P43/6/78]
gi|434381627|ref|YP_006703410.1| thymidylate kinase [Brachyspira pilosicoli WesB]
gi|300689264|gb|ADK31935.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
gi|404430276|emb|CCG56322.1| thymidylate kinase [Brachyspira pilosicoli WesB]
gi|404438023|gb|AFR71217.1| thymidylate kinase [Brachyspira pilosicoli B2904]
gi|430781046|gb|AGA66330.1| thymidylate kinase [Brachyspira pilosicoli P43/6/78]
Length = 203
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVE-LWRFPDRTTSVGQMISAYLSNQSHL 112
+G L+V+EG+D GK++ +L L +++E ++ F G + + ++
Sbjct: 2 KGKLIVIEGIDGSGKSTIAKKLAETLNK--NNIETIYTFEPTNAYYGAKLRDTMLSKDMD 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK-APEIG 171
D + L + R M++ L+ G T+++DRY YS +A+ AKGIDIE K E
Sbjct: 60 LDRELELFVDDRKEHIRLMIKPSLEEGKTVVLDRYMYSSIAYQGAKGIDIEKIKNMHESF 119
Query: 172 LLAPDSVLYLDIPPEKA----AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQ 227
+L PD V +P EK+ E+ G+ +R+E+ E+ +KV + + I+A +
Sbjct: 120 ILIPDIVFIFHLPVEKSLNRIMEKRGF-IDRFENEEYLKKVDSIFSSFNEPFIYHINADK 178
Query: 228 SIEDVEKQLKEIV 240
SI+D+ K+L EI+
Sbjct: 179 SIDDINKELIEIL 191
>gi|223478383|ref|YP_002582838.1| thymidylate kinase [Thermococcus sp. AM4]
gi|214033609|gb|EEB74436.1| Thymidylate kinase [Thermococcus sp. AM4]
Length = 227
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 35 CTPFRMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDR 94
T + S L++ + + G VV+EG+D GK++Q L + E G+ V L + P
Sbjct: 1 MTTIKNHSPHLLQVLEVKAVGIFVVIEGIDGAGKSTQAKLLAKWFERKGYEVVLTKEPT- 59
Query: 95 TTSVGQMISAYL---SNQSHLDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVD 145
T+ G++I + + +D I LLF+A+R E ++ L++G +I D
Sbjct: 60 DTAFGKLIRKLVLTGGREGIIDGARISHEAEALLFAADRAEHVHKLIRPALESGKVVISD 119
Query: 146 RYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---L 202
RY YS +A+ A+G+D++W + PD V+ LD+P +++ R + E L
Sbjct: 120 RYFYSSLAYQWARGLDLQWLIDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKIL 179
Query: 203 EFQRKVAQCYQMLRD--SSWKIIDACQSIEDVEKQLKEIVLDQV 244
E Q+KV + Y L + +I++A SIED+ + + +V ++
Sbjct: 180 ELQKKVRENYLKLAEMFPEIRIVNAQNSIEDIHRDIVGLVEQEI 223
>gi|389852999|ref|YP_006355233.1| thymidylate kinase [Pyrococcus sp. ST04]
gi|388250305|gb|AFK23158.1| thymidylate kinase [Pyrococcus sp. ST04]
Length = 203
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G +V EG+D GK++Q L + E G+ V L + P + +G++I + +D
Sbjct: 3 GIFIVFEGIDGSGKSTQAKLLAEWFEERGYEVVLTKEPT-DSDLGKIIRKLIVEGGIIDG 61
Query: 115 -----HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
T LLF+A+R E + ++E L+ G +I DRY YS +A+ A+G+ +EW
Sbjct: 62 SRVSYETEALLFAADRAEHVKRVIEPALQEGKVVICDRYFYSSLAYQWARGLSLEWLIKI 121
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSWKII 223
+ P+ + LD+P +++ R G E +E Q++V Q Y L + KI+
Sbjct: 122 NEFAIRPNLAILLDLPTKESIRRIKVRGGATEFDKLVELQKRVRQNYLKLAEMFPEMKIV 181
Query: 224 DACQSIEDVEKQLKEIV 240
+A SIEDV K + +V
Sbjct: 182 NAMASIEDVHKDIVALV 198
>gi|242398141|ref|YP_002993565.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
gi|259494284|sp|C6A0S1.1|KTHY_THESM RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|242264534|gb|ACS89216.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
Length = 210
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G +VLEG+D GK++Q L + E G+ V L + P T+ G++I + +
Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPT-DTAFGKLIRRLVLIGGKEGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E + ++E +KAG +I DRY YS +A+ A+G+D+ W
Sbjct: 61 IDGARISKEAEALLFAADRAEHVKKLIEPSIKAGKVVISDRYFYSSLAYQWARGLDLNWL 120
Query: 166 KAPEIGLLAP--DSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--S 218
+ AP D V+ LD+P +++ R R E +E Q+KV + Y L + +
Sbjct: 121 --INLNAFAPRADLVILLDLPVKESINRINGRSIRSEFDKIVELQKKVRKNYLKLAEKFN 178
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
+II+A +ED+ + ++
Sbjct: 179 EIRIINALAPVEDIHNDITALI 200
>gi|269986147|gb|EEZ92460.1| thymidylate kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 202
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
G L+V+EG+D GK +Q L LE G +V ++ +PD ++ G+ I ++L + L
Sbjct: 2 EGKLIVIEGIDGAGKATQAKILKEQLESQGKTVSVYSYPDYSSVYGERIKSFLYKKIDLK 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK--APEIG 171
+ +L+ + + R+ + +K G +++DR+ +S +A+ SA G E K +G
Sbjct: 62 VDELFMLYLIDMVKDRNRIIEDIKKGNDVLIDRFFFSTIAYQSAGGFSYETGKEFVKLLG 121
Query: 172 LLAPDSVLYLDIPPE-----KAAERGGYGGERYE-HLEFQRKVAQCYQMLRDSS-----W 220
+ V Y+++P + K ++G +++E + F V++ Y L+ + W
Sbjct: 122 MPPITVVFYINVPVDISMQRKEKQKGKMDVDKFESNKMFLSNVSKVYDQLKSENFYAKKW 181
Query: 221 KIIDACQSIEDVEKQLKE 238
ID +SIE++ +KE
Sbjct: 182 VEIDGSKSIEEISSLIKE 199
>gi|390960587|ref|YP_006424421.1| thymidylate kinase [Thermococcus sp. CL1]
gi|390518895|gb|AFL94627.1| thymidylate kinase [Thermococcus sp. CL1]
Length = 205
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 15/198 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSHLD 113
+V+EG+D GK++Q L + E GH V L + P T+ G++I + + +D
Sbjct: 2 FIVIEGIDGAGKSTQAKLLAEWFEKKGHEVVLTKEPT-DTAFGKLIRKLVLTGGKEGIID 60
Query: 114 DHTIH-----LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E + +++ L+AG +I DRY YS +A+ A+G+D+EW
Sbjct: 61 GARISHEAEALLFAADRAEHVAKLIKPSLEAGKIVISDRYFYSSLAYQWARGLDLEWLID 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHL-EFQRKVAQCYQML--RDSSWKI 222
+ PD V+ LD+P +++ +R G ++ + E Q++V + Y L R KI
Sbjct: 121 LNRFAIRPDLVILLDLPVKESMKRINGRSIKTEFDKIAELQKRVRENYLKLAERFPEIKI 180
Query: 223 IDACQSIEDVEKQLKEIV 240
++A S+ED+ + +V
Sbjct: 181 VNALASVEDIHNDIVALV 198
>gi|297526188|ref|YP_003668212.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
gi|297255104|gb|ADI31313.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
Length = 199
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+S G +VLEG+D GKTS +L+ +L G SV P T V + Y +
Sbjct: 3 ESNGFFLVLEGIDGAGKTSIAFKLMDFLVEKGFSVHYTYEPYDTLYVEALKKKY---DEY 59
Query: 112 LDDHTIHLLFSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
D + L ++A+R R+ + L+ G +I DRY YS A+ SA+G IEW
Sbjct: 60 RDAYLDALTYAADRLVHIRTDILPYLRRGYVVICDRYYYSSAAYQSAQGAPIEWVLEINK 119
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCYQMLRDSSWKI-IDAC 226
L PD +YLD+ P +R R YE L+F KV + Y L + + +DA
Sbjct: 120 YALKPDLTIYLDVDPHIGVKRREGLNTRFPEYEKLDFLYKVRENYLWLVKKGYMVLVDAN 179
Query: 227 QSIEDVEKQLKEIVLDQVT 245
+ + V + +++IV + +
Sbjct: 180 REFDKVYRDVEKIVFEHIV 198
>gi|108758316|ref|YP_631609.1| thymidylate kinase [Myxococcus xanthus DK 1622]
gi|50404253|gb|AAT76867.1| serine/threonine kinase Pkn2 associate protein 1 [Myxococcus
xanthus]
gi|108462196|gb|ABF87381.1| thymidylate kinase [Myxococcus xanthus DK 1622]
Length = 221
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ----- 109
G +VLEGLD G T+Q RL + L GHSV R P VG MI L+ +
Sbjct: 14 GRFIVLEGLDGAGTTTQVERLAAALRAEGHSVLTTREPS-DGPVGTMIRQALTGRLGLPG 72
Query: 110 --SHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
L T+ LLF+A+R + + + L AG ++ DRY S +A+ A + +EW +
Sbjct: 73 GAGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQGAS-LPMEWVE 131
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQML---RDSSW 220
A ++PD L++ + PE AA R G E +E E QR++A+ Y R+
Sbjct: 132 AVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEADEAQRRIAKQYVAAIRRREKHE 191
Query: 221 KI--IDACQSIEDV 232
+I ID Q IE V
Sbjct: 192 RIVHIDGEQGIEAV 205
>gi|338534607|ref|YP_004667941.1| thymidylate kinase [Myxococcus fulvus HW-1]
gi|337260703|gb|AEI66863.1| thymidylate kinase [Myxococcus fulvus HW-1]
Length = 224
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ----- 109
G VVLEGLD G T+Q RL + L GH+V R P VG MI L+ +
Sbjct: 17 GRFVVLEGLDGAGTTTQVERLAAALRAEGHAVVTTREPS-DGPVGTMIRQALTGRLGLPH 75
Query: 110 --SHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
L T+ LLF+A+R + + + L AG ++ DRY S +A+ A + + W +
Sbjct: 76 GAGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQGAS-LPMAWVE 134
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQM---LRDSSW 220
A ++PD L++ + PE AA R G E +E E QR++A+ Y LR+
Sbjct: 135 AVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEADEAQRRIAKQYVAAIRLREKHE 194
Query: 221 KI--IDACQSIEDV 232
+I ID Q IE V
Sbjct: 195 RIVHIDGEQGIEAV 208
>gi|269986146|gb|EEZ92459.1| dTMP kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 200
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +V+EG+D GK +Q L ++ G V L + P +G + A L+ + +L
Sbjct: 2 KGKFIVIEGIDNAGKGTQSVLLAEHIRSKGFKVILTKEPTNGI-LGGISKAALNKELNLS 60
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ + LLF A+R + +E ++ G +I DRY +S +A+ A I+ +W ++ +
Sbjct: 61 NKALQLLFCADRAHHLETEIEPAMRDGFIVICDRYFFSTLAYGFASNINYKWLRSVNVSF 120
Query: 173 LAPDSVLYLDIPPEKAAERGGY---GGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQS 228
PD +YLD+ P+ + R G + +++LE KV Q Y + ++ K IDA
Sbjct: 121 RKPDLGIYLDLDPKTSLSRAKKQVDGLQLFDNLEKISKVRQAYLSIAKEFHIKKIDAKGD 180
Query: 229 IEDVEKQLKEIV 240
+E V +++ +I+
Sbjct: 181 VEVVSQRINKII 192
>gi|126465530|ref|YP_001040639.1| thymidylate kinase [Staphylothermus marinus F1]
gi|166223119|sp|A3DM71.1|KTHY_STAMF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|126014353|gb|ABN69731.1| thymidylate kinase [Staphylothermus marinus F1]
Length = 199
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
++ G +VLEG+D GKTS +L +L G +V P T V + Y +
Sbjct: 3 ENNGFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYVEALKKKY---NEY 59
Query: 112 LDDHTIHLLFSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
D + L ++A+R R+ + L+ G +I DRY YS A+ SA+G IEW
Sbjct: 60 RDAYLDALTYAADRLVHIRTEILPYLRRGYIVICDRYYYSSAAYQSAQGAPIEWVLEINK 119
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCYQMLRDSSWKI-IDAC 226
L PD +YLD+ P +R R YE L+F +V + Y L D + + +DA
Sbjct: 120 YALKPDLTIYLDVDPAIGVKRRKGLNTRFPEYEKLDFLYRVRENYLWLVDKGYMVLVDAN 179
Query: 227 QSIEDVEKQLKEIVLDQVT 245
+ + V + +++IVL+ +
Sbjct: 180 REFDKVYRDVEKIVLEHLV 198
>gi|145590421|ref|YP_001152423.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514]
gi|145282189|gb|ABP49771.1| thymidylate kinase [Pyrobaculum arsenaticum DSM 13514]
Length = 196
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 56 ALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
A VV+EG+D GK++ ++S L L V + R P + +G++I + + D
Sbjct: 2 AFVVIEGIDGSGKST----VISLLSKLLPRVYVTREPS-ASPIGRLIKEWALREGTADPR 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R E + +E +L+ G +I +RY S +A+ A G+ IE+ K +
Sbjct: 57 VDALLFAADRIEHYKREIEPRLREGYIVICERYVESSIAYQGAAGVPIEYIKFINSAVPK 116
Query: 175 PDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
PD + LD+ PE A R G E+YE L F ++V Y + + ++DA + E+
Sbjct: 117 PDITVILDVDPEVAIARVKQRGTAEKYEQLSFLKRVRGIYLSRAAEEGYPVLDASRPAEE 176
Query: 232 VEKQLKEIV 240
V K++ ++
Sbjct: 177 VAKEVARLI 185
>gi|57641338|ref|YP_183816.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
gi|73920827|sp|Q5JH21.1|KTHY_PYRKO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|57159662|dbj|BAD85592.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
Length = 205
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSHLD 113
+VLEG+D GK++Q L + E G+ V L + P T G++I + + +D
Sbjct: 2 FIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPT-DTPFGKLIRRLVLTGGKEGIID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E +++ L+AG +I DRY YS +A+ A+G+D+EW
Sbjct: 61 GAKISHEAEALLFAADRAEHVDKLIKPSLEAGKVVISDRYFYSSLAYQWARGLDLEWLID 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQMLRD--SSWKI 222
+ PD V LD+P +++ R E + E QRKV + Y L + KI
Sbjct: 121 LNRFAVKPDIVFLLDLPVKESMNRIRSRKVKSEFDKIFELQRKVRENYLKLAEMFPEMKI 180
Query: 223 IDACQSIEDVEKQL 236
I+A + +E V Q+
Sbjct: 181 INAMEDVETVHNQI 194
>gi|406893454|gb|EKD38514.1| hypothetical protein ACD_75C00708G0006 [uncultured bacterium]
Length = 212
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+V EG D GK++Q L SYLE G+ V R P + Q+ + Y++ +
Sbjct: 7 RGKLIVFEGTDGTGKSTQLKLLGSYLEECGYPVVTTREPTNGSYGRQIRNLYINRHEYSR 66
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+ + L + R ++E L+ G ++ DRY +S A+ A G+D E A
Sbjct: 67 EEELELFLADRREHVLHLLEPCLRQGKIVLCDRYYFSTAAYQGALGLDPETILARNSFAP 126
Query: 174 APDSVLYLDIPPEKAAER--GGYGG--ERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSI 229
PD VL L P E ER G G +E EF KVA + + + IDA SI
Sbjct: 127 EPDLVLLLQAPLEIGMERITSGRGDTLNNFEQREFLEKVAAIFAAIDRPYIRRIDASGSI 186
Query: 230 EDVEKQLKEIV 240
V +Q+ + V
Sbjct: 187 AAVHRQVIDAV 197
>gi|409095120|ref|ZP_11215144.1| thymidylate kinase [Thermococcus zilligii AN1]
Length = 208
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G +VLEG+D GK++Q L + E G+ V L + P T+ G++I + +
Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAEWFEKRGYEVVLTKEPT-DTAFGKLIRRLVLTGGREGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E ++ L+AG +I DRY YS +A+ A+G+D+EW
Sbjct: 61 IDGARISHEAEALLFAADRAEHVDKLIRPSLEAGKVVISDRYFYSSLAYQWARGLDLEWL 120
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSW 220
+ PD + LD+P +++ R + E E QRKV + Y L +
Sbjct: 121 IDLNRFAIRPDLAVLLDLPVKESMRRINRRSLKSEFDKIAELQRKVRENYLKLVEMFPEM 180
Query: 221 KIIDACQSIEDVEKQLKEIVLDQV 244
+I++A SIED+ + ++ +++
Sbjct: 181 RIVNAQNSIEDIHNDIVGLIEEEI 204
>gi|15668468|ref|NP_247266.1| thymidylate kinase [Methanocaldococcus jannaschii DSM 2661]
gi|2497577|sp|Q57741.1|KTHY_METJA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|1591015|gb|AAB98278.1| thymidylate kinase (tmk) [Methanocaldococcus jannaschii DSM 2661]
Length = 188
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
+V EG+D GKT+Q L ++ W + + VG++I LS ++ +D+
Sbjct: 4 NMFIVFEGIDGSGKTTQSKLLAKKMDAF------WTYEPSNSLVGKIIREILSGKTEVDN 57
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R E +++ +LK ++ DRY YS +A+ S G+D + K+ L
Sbjct: 58 KTLALLFAADRIEHTKLIKEELKK-RDVVCDRYLYSSIAYQSVAGVDENFIKSINRYALK 116
Query: 175 PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDAC-QSIEDV 232
PD V L + E A +R + +E +F +KV Y ++ + ++ +ID +S+E+V
Sbjct: 117 PDIVFLLIVDIETALKRVK-TKDIFEKKDFLKKVQDKYLELAEEYNFIVIDTTKKSVEEV 175
Query: 233 EKQL 236
++
Sbjct: 176 HNEI 179
>gi|328950279|ref|YP_004367614.1| thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
gi|328450603|gb|AEB11504.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
Length = 202
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + EG + GK++Q + L ++L G SV + R P T +G+ + +L ++S +D
Sbjct: 4 GFFITFEGPEGSGKSTQAAHLAAWLRQQGVSVVVTREPG-GTPLGRAVRQWLLSES-MDP 61
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA---PE 169
T LL++A+R E R ++ L AG +I DR+ S A+ +G+D+EW +A P
Sbjct: 62 VTEFLLYTADRAEHVRHVIRPALAAGQVVISDRFVDSSYAYQGFGRGLDLEWLRAVSQPV 121
Query: 170 IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKI 222
+ L PD LD+PPE + AER E L F R+V + Y++L + +
Sbjct: 122 LEGLVPDVTFLLDLPPEVGLARKAERDRL---EQESLAFHRRVREGYRVLARAEPQRFVV 178
Query: 223 IDACQSIEDVEKQLK 237
+DA Q E + +Q++
Sbjct: 179 LDATQPPEVIVEQVR 193
>gi|118576712|ref|YP_876455.1| thymidylate kinase [Cenarchaeum symbiosum A]
gi|118195233|gb|ABK78151.1| thymidylate kinase [Cenarchaeum symbiosum A]
Length = 186
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V+EG D+ GK +Q L L G ++ FPD TT VG+M+ L + +
Sbjct: 7 IIVIEGCDQAGKQTQAGLLAGALNRKGRKARVFAFPDYTTPVGKMMKKQLEGRG-FEPRV 65
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
H L +ANRWEK + A G+ I+DRY S + + G+ W + GL D
Sbjct: 66 FHCLAAANRWEKAGEIRAASSGGSVAILDRYRQSNMVYGVLNGLSRRWLAGLDAGLPRAD 125
Query: 177 SVLYLDIPPEKAAER 191
V+ LDI ++A R
Sbjct: 126 VVILLDIKQKEAFRR 140
>gi|405373856|ref|ZP_11028515.1| Thymidylate kinase [Chondromyces apiculatus DSM 436]
gi|397087370|gb|EJJ18420.1| Thymidylate kinase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 222
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ----- 109
G +VLEGLD G T+Q RL + L GHSV R P VG MI L+ +
Sbjct: 14 GRFIVLEGLDGAGTTTQSERLAAALRAEGHSVLTTREPS-DGPVGTMIRQALTGRLGLPG 72
Query: 110 --SHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
L T+ LLF+A+R + + + L AG ++ DRY S +A+ A + ++W +
Sbjct: 73 GAGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQGAT-LPMDWVE 131
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQML---RDSSW 220
A ++PD L++ + PE AA R G E +E E QR++A+ Y R+
Sbjct: 132 AVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEADEAQRRIAKQYVAAIRRREKHE 191
Query: 221 KI--IDACQSIEDV 232
+I ID Q IE V
Sbjct: 192 RIVHIDGEQGIEAV 205
>gi|290558929|gb|EFD92316.1| dTMP kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 205
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
G +V+EG+D GK +Q + L +L G V L + P +G + A L+ + ++
Sbjct: 2 NGKFIVIEGIDNAGKGTQSTLLTQHLRENGLKVVLTKEPTNGI-LGGLSKAALNKEINIS 60
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ LLF A+R + +E + G T+I DRY +S +A+ GI+ +W ++ I
Sbjct: 61 GRALQLLFCADRAHHIETEIEPMMSKGLTVICDRYFFSTLAYGFVSGINYKWLRSVNINF 120
Query: 173 LAPDSVLYLDIPPEKAAER--GGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSI 229
PD +YLD+ P+ + R G + ++ ++ KV Q Y + ++ K +DA S+
Sbjct: 121 RKPDLGIYLDLDPKVSLSRMPKQDGIQLFDTIQKISKVRQAYISISKEFHLKKVDANGSV 180
Query: 230 EDVEKQLKEIV 240
+V +++ +IV
Sbjct: 181 SEVSQKINKIV 191
>gi|379005290|ref|YP_005260962.1| thymidylate kinase [Pyrobaculum oguniense TE7]
gi|375160743|gb|AFA40355.1| thymidylate kinase [Pyrobaculum oguniense TE7]
Length = 196
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 9/188 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
VV+EG+D GK++ ++S L L V + R P ++ +G++I + + D
Sbjct: 3 FVVIEGIDGSGKST----VISLLSRLLPRVYVTREPS-SSPIGRLIKEWALREGTADPRV 57
Query: 117 IHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
LLF+A+R E + +E +L+ G +I +RY S +A+ A G+ IE+ K + P
Sbjct: 58 DALLFAADRIEHYKREIEPRLREGYIVICERYVESSIAYQGAAGVPIEYIKFINSAVPKP 117
Query: 176 DSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIEDV 232
D + LD+ PE A R G E+YE L F ++V Y + + ++DA + E+V
Sbjct: 118 DITVILDVDPEVAIARVKQRGAAEKYEQLSFLKRVRGIYLSRAAEEGYPVLDASRPAEEV 177
Query: 233 EKQLKEIV 240
K++ ++
Sbjct: 178 AKEVARLI 185
>gi|429757768|ref|ZP_19290298.1| dTMP kinase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429174359|gb|EKY15836.1| dTMP kinase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 260
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
RG + EG D GK++Q R+ + E G V + R P T +G + + N
Sbjct: 24 GRGLFITFEGGDGTGKSTQIQRVRQWFEERGQQVVVTREPG-GTELGTTLRQLVQNGPED 82
Query: 112 LDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEWCK 166
+D T LL++A+R + +++ L+ G ++VDRY S +A+ A G+D I
Sbjct: 83 VDPRTEALLYAADRAYHVATLIRPALERGEIVLVDRYIDSSLAYQGAARSLGVDEIRSLS 142
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK--- 221
G L PD L +D+PPE AA R G +R E +EF +V Y L DS
Sbjct: 143 MWATGSLLPDLTLLIDVPPEVAARRRGGEPDRMERESMEFHERVRHQYLALADSEADRIV 202
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTACKKGKP 252
+ID + + V +++ ++ ++V A +G P
Sbjct: 203 VIDGVGTEDQVFSEIRGVLEERVDAAFQGLP 233
>gi|11497681|ref|NP_068902.1| thymidylate kinase [Archaeoglobus fulgidus DSM 4304]
gi|6016458|sp|O30175.1|KTHY_ARCFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|2650584|gb|AAB91163.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304]
Length = 196
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ +EG+D GKT+ + + L+ G+ V++ + P + G+ I + S + +
Sbjct: 2 LIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPG-DSKFGKKIKS--SEERLSPEEE 58
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK------APEI 170
+ L + R + L++G +++DRY +S +A+ SA+GID + AP+
Sbjct: 59 LELFLKDREIDARENILPALQSGYAVVMDRYYFSNIAYQSARGIDARLIREMNEKIAPK- 117
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
PD + LD+ PE A ER G+ +E L++ RKV +C+ D + ++DA +
Sbjct: 118 ----PDLTILLDVEPEIALERVRKRGKLSPFEKLDYLRKVRKCFLENADETTVVVDASKP 173
Query: 229 IEDVEKQLKEIV 240
+E+V++++++++
Sbjct: 174 LEEVKEEVRKVI 185
>gi|337283718|ref|YP_004623192.1| thymidylate kinase [Pyrococcus yayanosii CH1]
gi|334899652|gb|AEH23920.1| thymidylate kinase [Pyrococcus yayanosii CH1]
Length = 205
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G +V EG+D GK++Q L + G+ V L + P + +G + + ++
Sbjct: 3 GLFIVFEGIDGAGKSTQARLLAEWFREKGYDVVLTKEPT-DSELGNFVKRLILIGGIING 61
Query: 115 HTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
I LLF+A+R E + ++E L+ G +I DRY YS +A+ A+G+D+EW +
Sbjct: 62 GRISHEAEALLFAADRAEHVKKVIEPALREGKVVISDRYFYSSLAYQWARGLDVEWLISV 121
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQML--RDSSWKII 223
P V+ LD+P +++ R G E LE QRKV + Y L R ++I+
Sbjct: 122 NSFAPRPHLVILLDLPAKESMRRVRLRGAESEFDKLLELQRKVRENYLKLAERFPEFRIV 181
Query: 224 DACQSIEDVEKQLKEIV 240
+A +ED+ + + +V
Sbjct: 182 NAMAPVEDIHRDVVALV 198
>gi|86158146|ref|YP_464931.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774657|gb|ABC81494.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 218
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G +RG VV+EGLD G T+Q L L G + + P VG ++ L+
Sbjct: 9 GRPAARGRFVVVEGLDGAGTTTQARLLGERLRADGRTAHVTAEPS-GGPVGALVRQVLTR 67
Query: 109 Q------SHLDDHTIHLLFSANRWEKRSM-MEAKLKAGTTLIVDRYSYSGVAFSSAKGID 161
+ + D H + LLF+A+R + R++ ++ KL AG ++ DRY+ S +A+ A +
Sbjct: 68 RVGGGGGADFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE 127
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQ----M 214
+EW + PD+ L+L + PE A R E YE FQR+VA Y +
Sbjct: 128 MEWVRTVNAAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRRVAAEYDRAIAL 187
Query: 215 LRDSSWKIID 224
LR + +++
Sbjct: 188 LRQAGESVVE 197
>gi|15606283|ref|NP_213662.1| thymidylate kinase [Aquifex aeolicus VF5]
gi|6016457|sp|O67099.1|KTHY_AQUAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|158429380|pdb|2PBR|A Chain A, Crystal Structure Of Thymidylate Kinase (Aq_969) From
Aquifex Aeolicus Vf5
gi|158429381|pdb|2PBR|B Chain B, Crystal Structure Of Thymidylate Kinase (Aq_969) From
Aquifex Aeolicus Vf5
gi|2983484|gb|AAC07063.1| thymidylate kinase [Aquifex aeolicus VF5]
Length = 195
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GKT+Q +L YL+ G+ V L+R P T VG+++ L + LD+ T
Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPG-GTKVGEVLREILLTE-ELDERT 59
Query: 117 IHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA-PEI 170
LLF A+R ++E K LK +I+DR+ S +A+ KG+D+E+ K E
Sbjct: 60 ELLLFEASRS---KLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEF 116
Query: 171 GL--LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDAC 226
+ PD L LDIP + A R R+E+ EF KV + + L + + +IDA
Sbjct: 117 ATRGVKPDITLLLDIPVDIALRRLKEKN-RFENKEFLEKVRKGFLELAKEEENVVVIDAS 175
Query: 227 QSIEDVEKQL 236
E+V K++
Sbjct: 176 GEEEEVFKEI 185
>gi|302795141|ref|XP_002979334.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii]
gi|300153102|gb|EFJ19742.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii]
Length = 459
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 104/240 (43%), Gaps = 74/240 (30%)
Query: 14 NFGALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCS 73
G +++ + H++ + +C + +S L +G + RG L+VLEGLDR GK
Sbjct: 193 GMGEWLMKQKQGHVDLMEEC----LQAVTSMQLAVGA-EKRGTLIVLEGLDRSGK----- 242
Query: 74 RLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEKRSMME 133
S+Q H W +ME
Sbjct: 243 ---------------------------------SSQCH--------------W----LME 251
Query: 134 AKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGG 193
KL AG TL+VDRYSYSGVAFS+AKG+D+EWCKA +GL A D V + E
Sbjct: 252 MKLMAGITLVVDRYSYSGVAFSAAKGLDLEWCKALGVGLPAADLVRQRKLLCAVDMEMSS 311
Query: 194 YGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPF 253
+ F++K+ ++ R +DA QS + V + ++E + + C G+ F
Sbjct: 312 W--------IFRKKLPYSTKVCR-----FVDARQSFDQVHELMRETCVKTFSMCLNGQFF 358
>gi|119872697|ref|YP_930704.1| dTMP kinase [Pyrobaculum islandicum DSM 4184]
gi|119674105|gb|ABL88361.1| thymidylate kinase [Pyrobaculum islandicum DSM 4184]
Length = 205
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 9/189 (4%)
Query: 56 ALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
A V +EG+D GK++ +L L V + R P +G++I + +D H
Sbjct: 2 AFVAIEGIDGSGKSTVILQLAEMLP----KVYVTREPS-GGPIGRLIKEWALKGGTIDPH 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R E + +E K++ G +I +RY S +A+ A G+ I++ K +
Sbjct: 57 VDALLFAADRIEHYKREIEPKVREGYIVISERYIESSIAYQGAAGVPIDFIKIINSAVPK 116
Query: 175 PDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
D + LD+ PE A R G E+YEH F ++V + Y Q R+ + ++DA +
Sbjct: 117 ADITIILDVDPEIAIARIKQRGDSEKYEHSAFLKRVREIYLQRAREEGYPVVDASRPPNV 176
Query: 232 VEKQLKEIV 240
V K + EI+
Sbjct: 177 VAKDVAEII 185
>gi|75758384|ref|ZP_00738507.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|434379429|ref|YP_006613851.1| thymidylate kinase [Bacillus thuringiensis HD-789]
gi|74494110|gb|EAO57203.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|401878200|gb|AFQ30365.1| thymidylate kinase [Bacillus thuringiensis HD-789]
Length = 204
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++ LEGLD+ GK SQ +L L G++VE F T G +I +L + +
Sbjct: 3 IIALEGLDKSGKKSQADKLHEALYERGYNVEQSEFHRYDTPTGGLIRQFLDGEYNPGQLA 62
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
I + +A+++ + + E + LI+DRY S + +S+A G+DI++ + P+
Sbjct: 63 IECIMAADKYAQLNWFEELAEKLDVLILDRYLVSQLVYSTANGVDIDFTANLLDRMPEPN 122
Query: 177 SVLYLDIPPEKAAERGGYGGE--RYEH----LEFQRKVAQCYQML--RDSSWKIIDACQS 228
++LDI PE++ +R G GE +YE L R + Y L D + I+D +
Sbjct: 123 FQIFLDIEPEESMKRKGKHGENDKYESDKELLTRARDLYLRYMKLEEEDGNAMILDGTLA 182
Query: 229 IEDVEKQLKEIVLDQVTACK 248
+E++ +Q+ E L +T K
Sbjct: 183 VEELHQQILERTLSLLTESK 202
>gi|240103826|ref|YP_002960135.1| thymidylate kinase [Thermococcus gammatolerans EJ3]
gi|259494283|sp|C5A1K2.1|KTHY_THEGJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|239911380|gb|ACS34271.1| Thymidylate kinase (dTMP kinase) (tmk) [Thermococcus gammatolerans
EJ3]
Length = 208
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G VV+EG+D GK++Q L + E G+ V L + P T+ G++I + +
Sbjct: 2 GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPT-DTAFGKLIRKLVLTGGREGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E +++ L++G +I DRY YS +A+ A+G+D++W
Sbjct: 61 IDGARISHEAEALLFAADRAEHVHKLIKPALESGKVVISDRYFYSSLAYQWARGLDLQWL 120
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSW 220
+ PD V+ LD+P +++ R + E +E Q++V + Y L +
Sbjct: 121 IDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKIVELQKRVRENYLKLAEMFPEI 180
Query: 221 KIIDACQSIEDVEKQLKEIVLDQV 244
+I++A SIED+ + + +V ++
Sbjct: 181 RIVNAQNSIEDIHRDIVGLVEQEI 204
>gi|304315605|ref|YP_003850750.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|433653807|ref|YP_007297515.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|302777107|gb|ADL67666.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|433291996|gb|AGB17818.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 205
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMI-SAYLSNQSHL 112
+G L+ EG+D GKT+Q + L YL +G + + R P TSVG+ I + L ++ +
Sbjct: 3 KGKLITFEGIDGSGKTTQINLLKEYLLNIGRDIVVLREPG-GTSVGEKIRNILLDKKNKI 61
Query: 113 DDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID---IEWCKA 167
LL++A+R E + ++ L G +I+DR+ S + + A+GI +E
Sbjct: 62 VPTAEALLYAASRAELVKEVIIPSLNNGKIVILDRFVDSSIVYQGYARGIGVKAVEEINN 121
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQML---RDSSW 220
I L PD +YLDI P+ +R ++ E LEF KV + Y+ L R +
Sbjct: 122 IAIAGLVPDLTIYLDIKPKDTIKRIDRRKDKDRLEMEDLEFHEKVYEGYKQLIKSRPDRY 181
Query: 221 KIIDACQSIEDVEKQL-KEI 239
+IDA I+ ++K + KEI
Sbjct: 182 LVIDATHDIDYIQKSIVKEI 201
>gi|452994108|emb|CCQ94335.1| Thymidylate kinase [Clostridium ultunense Esp]
Length = 213
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--LDDH 115
+ +EG++ GKT+ RL LE G V L R P ++ + I A L N H +D
Sbjct: 7 ITVEGIEGAGKTTVLQRLKEELERRGKRVLLTREPG-GVAIAEAIRAILLNPEHRGMDAI 65
Query: 116 TIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEWCKAP 168
T LL++A+R ++ ++E LK G ++ DRY S +A+ A+G+ +I
Sbjct: 66 TEALLYAASR--RQHLVEKVLPALKEGKLVLCDRYVDSSLAYQGYARGLGMKEILDLNRF 123
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD---SS 219
IG P LYLD+PPE R GER E L+F RKV + Y +L D
Sbjct: 124 AIGEAFPSLTLYLDLPPEVGLSRVYRDGEREVNRLDMESLQFHRKVREGYLVLADHEPER 183
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKK 249
K+IDA S+E+V K +++L+ V+ ++
Sbjct: 184 IKVIDAGASLEEVVKVSLQLLLNHVSQGRE 213
>gi|389860445|ref|YP_006362684.1| thymidylate kinase [Thermogladius cellulolyticus 1633]
gi|388525348|gb|AFK50546.1| thymidylate kinase [Thermogladius cellulolyticus 1633]
Length = 205
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +VLEGLD GKTS + L+S L LG+ P ++ V + Y S +
Sbjct: 8 RGLFLVLEGLDGSGKTSIANILISRLGELGYRATYTYEPYDSSIVRAVKGEYSSARDAYV 67
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
D + L W ++++E L+ G ++ DRY YS VA+ +A G EW E+
Sbjct: 68 DALAYALDRLIHW--KTVIEPALREGAVVVCDRYFYSSVAYQTASGAPYEWVL--EVNRF 123
Query: 174 A--PDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
A PD +YLD+ P R R YE ++F +V + Y +M+R+ ++D+ +
Sbjct: 124 APRPDLAVYLDVEPSLGLARKKGVPSRFPEYERVDFLSRVREVYLRMVREGLLVVVDSSR 183
Query: 228 SIEDVEKQLKEIV---LDQVTA 246
+E+V + + +V LD++T+
Sbjct: 184 GLEEVFRDVWGLVRPLLDRLTS 205
>gi|406885485|gb|EKD32670.1| Thymidylate kinase [uncultured bacterium]
Length = 223
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQ----SH 111
L+VLEGLD GK++Q + L Y E G V+ FP + V G +I+ +L
Sbjct: 2 LIVLEGLDGAGKSTQINLLQKYFESSGAVVKYLHFPRFDSPVFGDLIARFLRGDLGSIDQ 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIE-------W 164
+ + I LLF+ +R E M+ LK G +I+DRY YS +AF AK D+E W
Sbjct: 62 VHPYLIALLFAGDRREAGDMIREWLKEGYCVILDRYLYSNIAFQCAKVKDLEEAENLRDW 121
Query: 165 CKAPE---IGLLAPDSVLYLDIP----------PEKAAERGGYGGERYEH---LEFQRKV 208
E + PD L+LD+P K +R G+R H +EFQ KV
Sbjct: 122 IFDTEYIKFAIPKPDLNLFLDVPLNFVHKKLNENRKGGDREYLQGKRDIHEASIEFQSKV 181
Query: 209 AQCY--QMLRDSSWKIIDACQSI 229
Y + RD+ + ID C I
Sbjct: 182 RDRYLKECKRDTDFVRID-CADI 203
>gi|212223342|ref|YP_002306578.1| thymidylate kinase [Thermococcus onnurineus NA1]
gi|229621846|sp|B6YSZ4.1|KTHY_THEON RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|212008299|gb|ACJ15681.1| thymidylate kinase [Thermococcus onnurineus NA1]
Length = 205
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSHLD 113
+V+EG+D GK++Q L + + G+ V L + P T+ G++I + + +D
Sbjct: 2 FIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPT-DTAFGKLIRRLVLTGGKEGIID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E +++ LK G +I DRY YS +A+ A+G+D+EW
Sbjct: 61 GARISHEAEALLFAADRAEHVHKLIKPSLKTGKIVISDRYFYSSLAYQWARGLDLEWLID 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHL-EFQRKVAQCYQML--RDSSWKI 222
+ PD V+ LD+P +++ +R G ++ + E Q+KV + Y L R +I
Sbjct: 121 LNRFAVRPDLVILLDLPVKESMKRINGRSIKTEFDKIAELQKKVRENYLKLAERFPEMRI 180
Query: 223 IDACQSIEDVEKQLKEIV 240
++A S+ED+ + +V
Sbjct: 181 VNALASVEDIHNDIVALV 198
>gi|197122531|ref|YP_002134482.1| dTMP kinase [Anaeromyxobacter sp. K]
gi|196172380|gb|ACG73353.1| dTMP kinase [Anaeromyxobacter sp. K]
Length = 219
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ------S 110
VVLEGLD G T+Q L L G + + P VG ++ L+ + +
Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPS-GGPVGALVRQVLTRRVTGAAGA 76
Query: 111 HLDDHTIHLLFSANRWEKRSM-MEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
D H + LLF+A+R + R++ ++ KL AG ++ DRY+ S +A+ A ++EW +
Sbjct: 77 DFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGEMEWVRQVN 136
Query: 170 IGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQ----MLRDSSWKI 222
PD+ L+L + PE A R E YE FQRKVA Y +LR + +
Sbjct: 137 GAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRKVAAEYDRAIALLRQAGESV 196
Query: 223 ID 224
I+
Sbjct: 197 IE 198
>gi|220917316|ref|YP_002492620.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955170|gb|ACL65554.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 219
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ------S 110
VVLEGLD G T+Q L L G + + P VG ++ L+ + +
Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPS-GGPVGALVRQVLTRRVTGVAGA 76
Query: 111 HLDDHTIHLLFSANRWEKRSM-MEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
D H + LLF+A+R + R++ ++ KL AG ++ DRY+ S +A+ A ++EW +
Sbjct: 77 DFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGEMEWVRQVN 136
Query: 170 IGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQ----MLRDSSWKI 222
PD+ L+L + PE A R E YE FQRKVA Y +LR + +
Sbjct: 137 GAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRKVAAEYDRAIALLRQAGESV 196
Query: 223 ID 224
I+
Sbjct: 197 IE 198
>gi|320100889|ref|YP_004176481.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
gi|319753241|gb|ADV64999.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
Length = 204
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT---SVGQMISAYLSNQS 110
+G +VLEGLD GKT+ RL+ LE G FP T + +++ A S S
Sbjct: 4 KGYFIVLEGLDGAGKTTVAHRLVEELESRG-------FPAIYTYEPTDSEIVKAVKSIYS 56
Query: 111 HLDDHTIHLL-FSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
L D I L F+ +R +S+++ ++ G T++ DRY YS VA+ SA G +W
Sbjct: 57 DLRDAYIDALAFALDRLIHVKSLVKPFIEKGVTVVSDRYFYSSVAYQSASGAPFDWILEV 116
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCY-QMLRDSSWKIID 224
L PD +YLD+ PE+ R R YE EF +V + Y +M+ +D
Sbjct: 117 NKYALKPDVAIYLDVDPEEGLSRKTTSTSRFPEYEKKEFLHRVREAYVRMVEIGLLTRVD 176
Query: 225 ACQSIEDVEKQLKEIV 240
A + + +V ++ IV
Sbjct: 177 ASRPLGEVYAEVWSIV 192
>gi|288818972|ref|YP_003433320.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
gi|384129720|ref|YP_005512333.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
gi|288788372|dbj|BAI70119.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
gi|308752557|gb|ADO46040.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G L+ LEG+D GKT+Q + L YL GH L+R P +T + + I + + S LD
Sbjct: 2 KGFLITLEGIDGSGKTTQANLLYEYLRSKGHKASLYRDPG-STPLAEKIRELIMSFS-LD 59
Query: 114 DHTIHLLFSANR----WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
T LLF R WEK + L+ G +IVDR+ S VA+ G +I
Sbjct: 60 PITELLLFETARSSLVWEK---ILPDLQKGNVVIVDRFIDSTVAYQGY-GREINLGTVNV 115
Query: 170 IGLLA-----PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK--- 221
+ +A PD L +P E A R G ++E +F RKV Y +++ S +
Sbjct: 116 LNHIATRGRKPDLTFILHVPLEVALSRIGKDKTKFEDKDFLRKVRDAYFLIQSSEKERQI 175
Query: 222 -IIDACQSIEDVEKQLKEIV 240
+IDA + E+V K++ +IV
Sbjct: 176 YLIDANREKEEVFKEIVKIV 195
>gi|18312312|ref|NP_558979.1| thymidylate kinase [Pyrobaculum aerophilum str. IM2]
gi|23821790|sp|Q8ZY35.1|KTHY_PYRAE RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|18159759|gb|AAL63161.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2]
Length = 192
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 56 ALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
A V +EG+D GK++ ++S LE V R P + +G++I + +D H
Sbjct: 2 AFVAIEGIDGSGKST----VISLLEKKLPRVYATREPS-SGPIGRLIKEWALKGGSVDPH 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R E + +E +++ G +I +RY S +A+ A G+ E+ K +
Sbjct: 57 VDALLFAADRIEHYKREIEPRVREGYIVISERYIESSIAYQGAAGVSREFVKYINSLVPK 116
Query: 175 PDSVLYLDIPPEKAA----ERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSI 229
PD + LD+ P A +RG G E+YE+L F RKV + Y + + +IDA +
Sbjct: 117 PDLTIILDVDPSIAEARIRQRG--GAEKYEYLSFLRKVREIYLARAAEEGYPVIDASRRP 174
Query: 230 EDVEKQLKEIV 240
E+V + E++
Sbjct: 175 EEVAADVAELI 185
>gi|20093219|ref|NP_619294.1| thymidylate kinase [Methanosarcina acetivorans C2A]
gi|23821774|sp|Q8THS9.1|KTHY_METAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|19918569|gb|AAM07774.1| thymidylate kinase Tmk [Methanosarcina acetivorans C2A]
Length = 206
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ +L E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAI--QSDTD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L+ G T+I DRYS Y G+ + +EW +
Sbjct: 60 QLAELFLFTADHAEHLAKLVKPALEDGKTVISDRYSDSRYAYQGITLKNRLDNPLEWVRD 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQML---RDSSWK 221
G + PD DI PE A +R G GE ++E +EF R V + + L +
Sbjct: 120 LHRGWTVIPDLTFLFDIEPEIAVKRCGKRGEQTKFEKIEFLRGVRELFLGLAAEEPERFV 179
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
I+DA S EDVEK + + +LD V
Sbjct: 180 IVDASGSPEDVEKAVVQKILDFV 202
>gi|396497712|ref|XP_003845042.1| hypothetical protein LEMA_P003500.1 [Leptosphaeria maculans JN3]
gi|312221623|emb|CBY01563.1| hypothetical protein LEMA_P003500.1 [Leptosphaeria maculans JN3]
Length = 106
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 28/102 (27%)
Query: 54 RGALVVLEGLDRCGKTSQCSRL---------------------LSYLEGLGHSVELWRFP 92
RG L+V EGLDR GK++QC++L L+++ G V++W F
Sbjct: 3 RGRLIVFEGLDRAGKSTQCAKLVADLRNDGRVVRHLRFPGMFSLAFIVGWQRKVDVWDFH 62
Query: 93 DR-------TTSVGQMISAYLSNQSHLDDHTIHLLFSANRWE 127
+ TT +GQMI +YLS QS +DH IHLLFSANRWE
Sbjct: 63 GKKRKKECITTRIGQMIDSYLSGQSEQEDHVIHLLFSANRWE 104
>gi|261403129|ref|YP_003247353.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
gi|261370122|gb|ACX72871.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
Length = 187
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+ +L + W + + VG++I LS +DD T
Sbjct: 2 FIVFEGIDGSGKTTISKKLAKSINAF------WTYEPSNSVVGELIRKILSGNVKVDDKT 55
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLFSA+R E ++ +L+ ++ DRY YS +A+ S G+D ++ ++ L PD
Sbjct: 56 LALLFSADRIEHNKKIKEELRY-RDVVCDRYLYSSIAYQSVAGVDEDFIRSINRYALKPD 114
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDAC-QSIEDV 232
V L E A +R + +E EF KV + Y + + + IID +++EDV
Sbjct: 115 LVFLLICDIETALKRIN-TKDIFEKKEFLEKVQEKYLDLAKKEGFVIIDTTDRTVEDV 171
>gi|390937964|ref|YP_006401702.1| thymidylate kinase [Desulfurococcus fermentans DSM 16532]
gi|390191071|gb|AFL66127.1| thymidylate kinase [Desulfurococcus fermentans DSM 16532]
Length = 206
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +VLEGLD GKT+ RL+ L G P + V + S Y ++L
Sbjct: 4 KGCFIVLEGLDGAGKTTIARRLVEDLSSRGIPASYTYEPTDSEIVRLIKSTY----NNLR 59
Query: 114 DHTIHLL-FSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
D I L F+ +R +++++ L G T+I DRY YS VA+ SA G EW
Sbjct: 60 DAYIDALAFALDRLIHVKNLVKPLLDRGVTVISDRYFYSSVAYQSASGAPFEWVIEVNKF 119
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
+ PD +YLDI PE+ R R YE EF ++V Y +M+ IDA +
Sbjct: 120 AMKPDVAIYLDIEPEEGLSRKYMHTSRFPEYEEKEFLQRVRSMYLRMVEMGLLIYIDASK 179
Query: 228 SIEDVEKQLKEIV 240
+ +V ++ +IV
Sbjct: 180 PLSEVYDRIWDIV 192
>gi|374327845|ref|YP_005086045.1| thymidylate kinase (tmk) [Pyrobaculum sp. 1860]
gi|356643114|gb|AET33793.1| thymidylate kinase (tmk) [Pyrobaculum sp. 1860]
Length = 199
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 56 ALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
A V +EG+D GK++ ++ L L V + + P VG++I + +D H
Sbjct: 2 AFVAVEGIDGSGKST----VIQLLAKLLPKVYVTKEPS-DGPVGRLIKEWALKGGSVDPH 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R E + +E K++ G +I +RY S +A+ A G+ I++ K +
Sbjct: 57 VDALLFAADRIEHYKREVEPKIREGYLVISERYVESSIAYQGAAGVPIDFIKYINKLVPR 116
Query: 175 PDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
PD + LD+ PE A R G E+YE+++F R+V + Y + ++DA +S E+
Sbjct: 117 PDLTVILDVDPEVAEARIRRRGHVEKYEYVQFLRRVREIYLTRAAEEGHPVVDASRSPEE 176
Query: 232 VEKQLKEIV 240
V + EI+
Sbjct: 177 VAADVAEII 185
>gi|442321472|ref|YP_007361493.1| thymidylate kinase [Myxococcus stipitatus DSM 14675]
gi|441489114|gb|AGC45809.1| thymidylate kinase [Myxococcus stipitatus DSM 14675]
Length = 218
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ---- 109
+G +VLEGLD G T+Q RL S L GH V R P VG MI L+ +
Sbjct: 10 KGRFIVLEGLDGAGTTTQVERLASALRAEGHVVVTTREPS-DGPVGTMIRQALTGRLGLP 68
Query: 110 ---SHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
L T+ LLF+A+R + + + L G ++ DRY S +A+ A + + W
Sbjct: 69 HGAGPLTSETLALLFAADRTDHLAARVLPALAEGKLVLCDRYVLSSLAYQGAS-LPMAWV 127
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGG---ERYEHLEFQRKVAQCY-QMLRDSSWK 221
+A ++PD L++ + PE AA+R G E +E E QR++A+ Y +R + K
Sbjct: 128 EAINSHAVSPDLTLFVGVAPEVAAKRRAVRGGAEELFEADEAQRRIAKQYLAAIRRRAKK 187
Query: 222 I----IDACQSIEDV 232
ID Q IE V
Sbjct: 188 ERIVHIDGEQGIEAV 202
>gi|298674964|ref|YP_003726714.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
gi|298287952|gb|ADI73918.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
Length = 199
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G L+ LEG+D GK++ RL+++ L + V R P + +G+ + + +S D
Sbjct: 2 KGKLITLEGIDGSGKSTITERLMNH-PSLSNVV-FTREPTKNW-IGKAVEQAI--RSDTD 56
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRY-----SYSGVAFSSAKGIDIEWCKA 167
LF+++ E S + ++ G +I DRY +Y GV S I+W +
Sbjct: 57 QIAEFFLFTSDHAEHISKTIYPAIENGKNVISDRYLDSRCAYQGVTLSEKFEDPIKWVQK 116
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQ-MLRDSSWK-- 221
G + PD ++LDI PE A ER G GE ++E +EF ++V YQ +++D+ +
Sbjct: 117 IHDGWTIIPDLTIFLDIDPEFAIERCGNRGEQTKFEKMEFLQQVYDNYQRLMKDNPERFV 176
Query: 222 IIDACQSIEDVEKQLKEIV 240
++D+ Q IE+VEK + +I+
Sbjct: 177 VVDSSQPIEEVEKDVVDII 195
>gi|289192999|ref|YP_003458940.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
gi|288939449|gb|ADC70204.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
Length = 185
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+Q S+LL+ E L W + + +G+ I LS +D+ T
Sbjct: 2 FIVFEGIDGSGKTTQ-SKLLA--EKLNA---FWTYEPSDSEIGRFIREILSGNVKVDNKT 55
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+A+R E +++ +LK ++ DRY YS +A+ S G+D + K+ L PD
Sbjct: 56 LALLFAADRVEHTKLIKEELKK-RAVVCDRYLYSSIAYQSVAGVDENFIKSINRYALEPD 114
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
V L + E A +R + +E +F KV Y ++ + ++ +ID +
Sbjct: 115 IVFLLVVDIETALKRVK-TKDIFEKKDFLEKVQNKYLELAEEYNFIVIDTTK 165
>gi|298246530|ref|ZP_06970336.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
gi|297554011|gb|EFH87876.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
Length = 262
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 20/214 (9%)
Query: 45 SLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISA 104
+++G G L+V+EG D G+T+Q L +LE LG++V F R+ G I
Sbjct: 44 GIQVGEEILPGRLIVIEGTDGVGRTTQLRLLRPWLESLGYAVADTEF-TRSVLAGDGIKQ 102
Query: 105 YLSNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIE 163
+ + L T+HL ++ + ++ S++ L+AG +++DRY Y+ +A + +G +
Sbjct: 103 AKAGHT-LGPITMHLFYATDFVDRLESLVLPALRAGFIVLIDRYIYTLMARAMVRGANPH 161
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE----KAAERGGY-----------GGERYE-HLEFQ-R 206
W ++ L P+++ YL+I + + +RGG+ G + YE + +Q R
Sbjct: 162 WLRSIYSLALKPNAIFYLNIGIDDLIPRVLQRGGFNYWESGMDMRLGPDLYESFITYQAR 221
Query: 207 KVAQCYQMLRDSSWKIIDACQSIEDVEKQLKEIV 240
+ Q M++ +++IDA Q +E + QLK +
Sbjct: 222 LLTQFEHMVKPYEFQVIDAKQPVEAICAQLKSAI 255
>gi|218883455|ref|YP_002427837.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
gi|218765071|gb|ACL10470.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
Length = 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +VLEGLD GKT+ RL+ L G P + V + S Y ++L
Sbjct: 4 KGCFIVLEGLDGAGKTTVARRLVEDLSSRGIPASYTYEPTDSEIVRVIKSTY----NNLR 59
Query: 114 DHTIHLL-FSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
D I L F+ +R ++ ++ L G T+I DRY YS VA+ SA G EW
Sbjct: 60 DAYIDALAFALDRLIHVKNWVKPLLDKGVTVISDRYFYSSVAYQSASGAPFEWVIEVNKF 119
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
+ PD +YLDI PE+ R R YE EF ++V Y +M+ IDA +
Sbjct: 120 AMKPDVAIYLDIEPEEGLSRKHMHTSRFPEYEEKEFLQRVRSMYLRMVEMGLLIYIDASK 179
Query: 228 SIEDVEKQLKEIVLDQVTACK 248
+ +V ++ +IV ++ +
Sbjct: 180 PLSEVYGRIWDIVYGRLISMN 200
>gi|296242887|ref|YP_003650374.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
gi|296095471|gb|ADG91422.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
Length = 203
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG +VLEG+D GKT+ L+ + G P + V + Y +
Sbjct: 5 NRGFFIVLEGIDGAGKTTLAKMLIDKFKSKGLDAIYTYEPTDSLIVKAVKGDY---SPYR 61
Query: 113 DDHTIHLLFSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
D + L F+ +R + ++ L G T+I DRY YS +A+ SA G EW
Sbjct: 62 DAYIDALAFALDRLIHVKKLILPMLGKGVTVISDRYFYSSIAYQSAMGAPYEWVAEVNKY 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCYQ-MLRDSSWKIIDACQ 227
L PD +YLDIPPE A +R R +E EF KV Q Y+ M+ + +DA +
Sbjct: 122 ALRPDLAIYLDIPPEVAIDRRKGLPSRFPEFEEREFLEKVRQYYKRMVSEGLLVEVDATR 181
Query: 228 SIEDVEKQLKE 238
++ V ++ E
Sbjct: 182 KLQTVYSEVIE 192
>gi|297566850|ref|YP_003685822.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
gi|296851299|gb|ADH64314.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
Length = 202
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + EG + GK++Q L +LE G V L R P +G + + +
Sbjct: 3 GWFITFEGPEGAGKSTQVKLLAPWLEAQGREVVLTREPGNGGWLGVEVRRLVLLSEPMSP 62
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LL+SA+R E R ++ L AG ++ DRY S +A+ +G+D+ W +A +G+
Sbjct: 63 EAEYLLYSADRAEHVRRVIAPALAAGKVVLCDRYLDSSLAYQGYGRGLDLGWLRAVAVGV 122
Query: 173 ---LAPDSVLYLDIPPEKAAER-GGYGGERYEHLEFQRKVAQCYQMLRDSS---WKIIDA 225
L P LD+PPE R G E LEF ++V Y L + + ++DA
Sbjct: 123 TQGLKPHRTFLLDLPPEVGLARFAGRDRLEREPLEFHQRVRAGYLELAKAEPQRFVVLDA 182
Query: 226 CQSIEDVEKQLK 237
QS E ++ +L+
Sbjct: 183 TQSPEAIQAELR 194
>gi|21227213|ref|NP_633135.1| thymidylate kinase [Methanosarcina mazei Go1]
gi|23821771|sp|Q8PXV5.1|KTHY_METMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|20905554|gb|AAM30807.1| Thymidylate kinase [Methanosarcina mazei Go1]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ ++ E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAI--QSETD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L G +I DRYS Y GV S +EW ++
Sbjct: 60 QLAELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSRFENPLEWVRS 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQMLRDSS---WK 221
G + PD DI PE A ER G GE ++E +EF + V + + +L +
Sbjct: 120 LHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQTKFEKIEFLQNVRENFLILAAEDPGRFV 179
Query: 222 IIDACQSIEDVEKQLKEIVLD 242
+IDA + E+VEK++ + VL+
Sbjct: 180 VIDASRPQEEVEKKVIKKVLE 200
>gi|215275163|sp|P0C8G1.1|KTHY_ASFP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 239
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++R GK++Q RL LE + ++ RFP+ T+ G +I L+ +
Sbjct: 2 RGILIAIEGVNRVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ + E + + A LK +IVDRY +SG+A++ A GI IE +
Sbjct: 62 SEQLHKLFTKHCSEFVAEIAALLKLNFIVIVDRYIWSGLAYAQADGITIETK-----NIF 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>gi|386359888|ref|YP_006058133.1| thymidylate kinase [Thermus thermophilus JL-18]
gi|383508915|gb|AFH38347.1| thymidylate kinase [Thermus thermophilus JL-18]
Length = 198
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 19/195 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GKT+Q RL ++LE GH V L R P + ++ S L+ + L
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGHPVLLTREPG--GGLPEVRSLLLTRE--LSP 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LLFSA+R E R ++ L AG +I DRY S +A+ +G+ + W + E+
Sbjct: 59 EAEYLLFSADRAEHVRKVILPGLAAGQVVISDRYLDSSLAYQGYGRGLPLPWLQ--EVAR 116
Query: 173 -----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQML---RDSSWKI 222
L P LD+PPE AA R +R E LEF R+V + Y L + +
Sbjct: 117 EATRGLKPQLTFLLDLPPE-AALRRVRRPDRLERLGLEFFRRVREGYLALARAEPGRFVV 175
Query: 223 IDACQSIEDVEKQLK 237
+DA E++ + ++
Sbjct: 176 LDATLPEEEIARAIQ 190
>gi|384431789|ref|YP_005641149.1| thymidylate kinase [Thermus thermophilus SG0.5JP17-16]
gi|333967257|gb|AEG34022.1| Thymidylate kinase [Thermus thermophilus SG0.5JP17-16]
Length = 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 19/195 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GKT+Q RL ++LE GH V L R P + ++ S L+ + L
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGHPVLLTREPG--GGLPEVRSLLLTQE--LSP 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LLFSA+R E R ++ L AG +I DRY S +A+ +G+ + W + E+
Sbjct: 59 EAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLQ--EVAR 116
Query: 173 -----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQML---RDSSWKI 222
L P LD+PPE AA R +R E LEF R+V + Y L + +
Sbjct: 117 EATRGLKPRLTFLLDLPPE-AALRRVRRPDRLERLGLEFFRRVREGYLALARAEPGRFVV 175
Query: 223 IDACQSIEDVEKQLK 237
+DA E++ + ++
Sbjct: 176 LDATLPEEEIARAIQ 190
>gi|223938821|ref|ZP_03630709.1| thymidylate kinase [bacterium Ellin514]
gi|223892519|gb|EEF58992.1| thymidylate kinase [bacterium Ellin514]
Length = 250
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 20/155 (12%)
Query: 48 IGNIDSR---GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG----Q 100
I N+D G L+V+EG D G+++Q +RL+ +LEG GH+ T VG
Sbjct: 31 IPNVDVNRLAGKLIVVEGADGSGRSTQIARLVEWLEGCGHA---------TVQVGLKRST 81
Query: 101 MISAYLSNQSH--LDDHTIHLLFSANRWEKR--SMMEAKLKAGTTLIVDRYSYSGVAFSS 156
++S L+ H + HT LF A + + +M+ LKAG ++ DRY Y+ +A
Sbjct: 82 LVSEELNQAQHGNILSHTTLSLFYATDFADQLENMILPALKAGFMVLADRYIYTLMARDL 141
Query: 157 AKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAER 191
+G+D W K L PD+V YL++ PE+ +R
Sbjct: 142 VRGMDEAWLKNLYSIALVPDAVFYLNVSPEQLVQR 176
>gi|291296874|ref|YP_003508272.1| thymidylate kinase [Meiothermus ruber DSM 1279]
gi|290471833|gb|ADD29252.1| thymidylate kinase [Meiothermus ruber DSM 1279]
Length = 205
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + EG + GK++Q L +L G V L R P T +GQ I L +Q +
Sbjct: 2 KGLFITFEGPEGAGKSTQARLLAEWLRAKGREVVLTREPG-GTRLGQAIRGLLLHQDPMC 60
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIG 171
+LL+SA+R E + +++ L G ++ DR+ S +A+ +G+D+ W +A G
Sbjct: 61 AEAEYLLYSADRAEHMQRVIQPALGLGHIVLCDRWLDSSLAYQGYGRGLDLGWLRAVAQG 120
Query: 172 L---LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WKII 223
+ P D+PPE ER G +R E LEF R+V Q Y L + + ++
Sbjct: 121 ATQGIRPHKTFLFDLPPEVGLER-FEGRDRLEREPLEFHRRVRQGYLELAQAEPERFVLL 179
Query: 224 DACQSIEDVEKQLK 237
DA Q +E + QL+
Sbjct: 180 DATQPLEALHTQLR 193
>gi|256810617|ref|YP_003127986.1| thymidylate kinase [Methanocaldococcus fervens AG86]
gi|256793817|gb|ACV24486.1| thymidylate kinase [Methanocaldococcus fervens AG86]
Length = 186
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+Q L ++ W + + VG+ I LS +DD T
Sbjct: 2 FIVFEGIDGSGKTTQSKLLAEKIKAF------WTYEPSNSDVGKFIREILSGNIKVDDKT 55
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+A+R E + + + ++ DRY YS +A+ S G+D ++ + L PD
Sbjct: 56 LALLFAADRVE-HTKLIKEKLKEKDVVCDRYLYSSIAYQSVAGVDEDFINSINKYALKPD 114
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDAC-QSIEDVEK 234
V L + E A +R + +E +F KV Y ++ ++ +ID +SI+DV K
Sbjct: 115 IVFLLIVDIEVALKRVK-TKDIFEKKDFLMKVQDKYLELAEKYNFIVIDTTNKSIKDVHK 173
Query: 235 QLKE 238
++ E
Sbjct: 174 EILE 177
>gi|385800897|ref|YP_005837301.1| thymidylate kinase [Halanaerobium praevalens DSM 2228]
gi|309390261|gb|ADO78141.1| thymidylate kinase [Halanaerobium praevalens DSM 2228]
Length = 208
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--S 110
+ G + EG++ GKT+Q +RL YL H V + R P T +GQ I L +
Sbjct: 2 AEGFFITFEGIEGSGKTTQINRLADYLRKNEHDVLISREPG-GTELGQKIRKILLDPHFD 60
Query: 111 HLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAP 168
+D T LL++A+R + + ++ LKAG +I DR+ S +A+ +A +G+D E
Sbjct: 61 TMDYKTEILLYAADRAQHVKEKIKPALKAGKIVISDRFVDSNLAYQAAGRGLDYEQVYQI 120
Query: 169 E---IGLLAPDSVLYLDIPPEKAAERG-----GYGGERYEHL--EFQRKVAQCY-QMLRD 217
IG PD LDI +K ER G+R E +F ++V + Y +M
Sbjct: 121 NNWVIGSTWPDLTFILDIDIKKGLERARKLSFDQAGDRLEREVDDFHQRVREAYLEMAVA 180
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
+ +I+A +SI ++EK +K I+
Sbjct: 181 ERFCLINAARSIVEIEKDIKNII 203
>gi|297622813|ref|YP_003704247.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
gi|297163993|gb|ADI13704.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
Length = 217
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 49 GNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
G ++RG + EG + GKT+Q RL + LE LG + P T+VG+ + A + +
Sbjct: 3 GEPETRGVFIAFEGPEGSGKTTQLGRLAARLEALGQVPLTTKEPG-GTAVGERLRALVLD 61
Query: 109 QS-HLDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC 165
+ + T LL++A+R E S+++ L AG ++ DR++ + VA+ +G+ +W
Sbjct: 62 PALRMHPETELLLYAASRAELVASVLKPALAAGRVVLCDRFTGATVAYQGEGRGLPKDWI 121
Query: 166 ---KAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCY--QMLR 216
A G L P L D+PPE + A RG F +V + + Q +
Sbjct: 122 GVLNARVTGGLKPHLTLLFDLPPEVGLARVARRGARDRLEQAAFAFHERVRRGFLQQAEQ 181
Query: 217 DSSWKIIDACQSIEDV 232
D SW ++DA + E+V
Sbjct: 182 DPSWHVLDASRPEEEV 197
>gi|195952508|ref|YP_002120798.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
gi|195932120|gb|ACG56820.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
Length = 200
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 19/193 (9%)
Query: 57 LVVLEGLDRCGKTSQCS---RLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
++V EG+D GK++Q + LL Y +V+L R P +T +G+ I L +Q LD
Sbjct: 11 IIVFEGIDGSGKSTQINIVYELLKY-----ENVKLLREPG-STEMGEKIRDILKSQK-LD 63
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGT-TLIVDRYSYSGVAFSS-AKGIDIEWCKAPEI- 170
T L A+R M+E K L++DRY YS +A+ GIDI + KA
Sbjct: 64 PKTQTFLIEASRAH---MIEKHFKGFEGILLLDRYIYSTIAYQGYGFGIDINFLKALNDF 120
Query: 171 --GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
+ PD V DI P A ER + +E LEF +KV Y ++ ++ ++ IDA +
Sbjct: 121 VCDIYIPDIVFLFDIDPRTALERLKREKDMFEDLEFLKKVRDGYLKLAKEYNFYTIDASK 180
Query: 228 SIEDVEKQLKEIV 240
++E + ++ I+
Sbjct: 181 NVEAITNEITNIL 193
>gi|374635134|ref|ZP_09706738.1| thymidylate kinase [Methanotorris formicicus Mc-S-70]
gi|373563324|gb|EHP89523.1| thymidylate kinase [Methanotorris formicicus Mc-S-70]
Length = 185
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+Q L L + + +G++I L + + T
Sbjct: 3 FIVFEGIDGSGKTTQAKLLAKKLNAF------YTYEPTDGLIGRLIREILKGEKKCEKET 56
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ L+F+A+R E ++E KL+ + ++ DRY YS +A+ +++G+D ++ PD
Sbjct: 57 LALMFAADRVEHIRLIEEKLRE-SHVVCDRYLYSSIAYQTSQGVDEDFILQINRFAKKPD 115
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDAC-QSIEDVEK 234
V+ L + E+ +R G E +E F +KV Y ++ + + +ID +SI+DV
Sbjct: 116 VVVLLTVDIEEGIKRLGKEKEIFEKERFLKKVQNKYLELAKKEDFIVIDTTNRSIDDVH- 174
Query: 235 QLKEIVLDQVTA 246
E VL+Q+
Sbjct: 175 ---EDVLNQINV 183
>gi|222111179|ref|YP_002553443.1| thymidylate kinase [Acidovorax ebreus TPSY]
gi|221730623|gb|ACM33443.1| thymidylate kinase [Acidovorax ebreus TPSY]
Length = 217
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+ GA + EG+D GK+S L L GH+V L R P T ++ L +
Sbjct: 2 TNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVTLTREPGGTPLAEKLREMLLHDSMDA 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPE-- 169
T+ L+F+A R R ++E L G ++ DR++ + A+ A +G D+E E
Sbjct: 62 LTETL-LVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYMERL 120
Query: 170 ----IGLLA-----PDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQMLR 216
+GL PD L+ D+PPE AA+R +R+E +EF +VA+ Y
Sbjct: 121 AQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSAARAPDRFESQPVEFFTRVARGYADRA 180
Query: 217 DSS---WKIIDACQSIEDVEKQLKEIV 240
+ + ID+ Q E V QL+ +V
Sbjct: 181 AGAPQRFARIDSSQPREQVAAQLRAVV 207
>gi|302336221|ref|YP_003801428.1| thymidylate kinase [Olsenella uli DSM 7084]
gi|301320061|gb|ADK68548.1| thymidylate kinase [Olsenella uli DSM 7084]
Length = 231
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSH 111
RG LV LEG+D CGK++Q + L +LE GH V R P T+V + I L +
Sbjct: 28 RGRLVTLEGIDGCGKSTQAALLADHLEASGHEVVCLREPG-GTAVSEKIRQLLLDPVNDE 86
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGID---IEWCK 166
+ D LL+ A+R + R ++E L+ G ++ DRY S A+ +G+D +E C
Sbjct: 87 MADECELLLYEASRAQLVRQVIEPALERGAVVVCDRYFDSTYAYQHGGRGLDRTLVERCN 146
Query: 167 APEIGLLA--PDSVLYLDIPPEKAAERGGYGG-ERYE--HLEFQRKVAQCYQML---RDS 218
E+G PD L D+ P A R GG +R E L FQ +V Y L +
Sbjct: 147 --ELGSCGRRPDVTLVFDLDPTVAFARATQGGRDRLEGAGLRFQERVRASYLDLAAKEPA 204
Query: 219 SWKIIDACQSIEDVEKQLKEIVLD 242
++IDA S ++V ++ ++ D
Sbjct: 205 RVRVIDATGSADEVGRRALLVLAD 228
>gi|296135948|ref|YP_003643190.1| thymidylate kinase [Thiomonas intermedia K12]
gi|295796070|gb|ADG30860.1| thymidylate kinase [Thiomonas intermedia K12]
Length = 215
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G V LEG+D GK++Q ++ L V L R P T +G+ I L +Q+
Sbjct: 10 GLFVSLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPG-GTEIGEKIRELLLHQTMRPA 68
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL- 172
L+F+A + ++E L GT ++ DR++ + +A+ KGI E +A +
Sbjct: 69 TEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALARWVH 128
Query: 173 --LAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQMLRDSS---WKII 223
L PD ++ +D+PPE AA+R +R E ++F +V Y S+ W++I
Sbjct: 129 PGLCPDCIILIDVPPEVAAQRLAQTRQRDRFEQESVDFFARVRANYLQQAASAPEKWRVI 188
Query: 224 DACQSIEDVEKQLKE 238
D Q+ E V+K + +
Sbjct: 189 DGTQTPEAVQKTITD 203
>gi|170290822|ref|YP_001737638.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174902|gb|ACB07955.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 191
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
LV EG+D GKT+Q RLL L LG + P +G+++ L + LD T
Sbjct: 2 LVAFEGIDGAGKTTQSRRLLDKLMELGMRAIYTKEPT-DGEIGKILKKALKGEIELDQRT 60
Query: 117 IHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
I LLF+A+R E RS LK +I+DRY S +A+ A + I+W + P
Sbjct: 61 IALLFAADRIEHIRS-----LKVDGIIILDRYLLSSLAYQGA-FLPIQWINELNRWVRLP 114
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWK----IIDACQ 227
D V YLDI P+ A R E Y L+F V + Y +++R W +IDA +
Sbjct: 115 DIVFYLDISPDVAISRIE-DKEIYHSLDFLSIVRENYLKLIRVEPWSSITYLIDAGR 170
>gi|71907819|ref|YP_285406.1| thymidylate kinase [Dechloromonas aromatica RCB]
gi|123627287|sp|Q47DZ5.1|KTHY_DECAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|71847440|gb|AAZ46936.1| thymidylate kinase [Dechloromonas aromatica RCB]
Length = 204
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
+G + EG+D GK+S L L G V + R P T +G+ + L N+ HL
Sbjct: 2 KGKFITFEGIDGAGKSSHVEWLAGLLRQRGIVVHVTREPG-GTELGEKLRELLLNEPMHL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE-- 169
+ T+ L+F+A R ++E L G ++ DR+S + A+ +G+D A E
Sbjct: 61 ETETL-LMFAARREHLARLIEPALARGEWVVCDRFSDATYAYQGGGRGLDRAKFLALEHW 119
Query: 170 -IGLLAPDSVLYLDIPPEKAAERGGYGGE-----RYEHLEFQRKVAQCY---QMLRDSSW 220
G L PD L D+P + A ER E ++F +V Q Y S
Sbjct: 120 VHGHLQPDLTLLFDLPLDVARERIVLANRVLDKFEQERVDFHERVRQAYLERAHTSPSRI 179
Query: 221 KIIDACQSIEDVEKQLKEIV 240
++IDA QSIE++ KQL++IV
Sbjct: 180 RVIDANQSIENIRKQLEQIV 199
>gi|241889738|ref|ZP_04777036.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
gi|241863360|gb|EER67744.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
Length = 202
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+G L+V EGLD GKT+Q + L + + V R P + + YL +
Sbjct: 2 KKGLLIVFEGLDGSGKTTQINLLEEWFKRNKKLVHSTRQPTDFYRNDKRVKDYLEDGIVP 61
Query: 113 DDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
+ ++I LL +A+R ++ ++ L G +I DRY YS +AF A+GI + +
Sbjct: 62 NMYSIALLAAADRTYQNEVEIKPTLSKGINIISDRYLYSSLAFFKARGIKYQEIRNINKD 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS-IE 230
+ PD +++LDI P+KA ER + +L F+ K + +R++ +++ ++ I
Sbjct: 122 IEEPDIIIFLDIDPDKALERVRVRDGK--NLRFEEKNDNTFIQVRNNFLEVLPKGKTLIV 179
Query: 231 DVEKQLKEI 239
D K +K I
Sbjct: 180 DSTKDVKLI 188
>gi|320451196|ref|YP_004203292.1| thymidylate kinase [Thermus scotoductus SA-01]
gi|320151365|gb|ADW22743.1| thymidylate kinase [Thermus scotoductus SA-01]
Length = 199
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + LEGLD GKT+Q L +LE G V L R P + L L
Sbjct: 2 KGFFLTLEGLDGSGKTTQARLLAQFLEEKGIKVRLTREPGGGLP---GVRDLLLKGEALS 58
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK--APE 169
+LLFSA+R E R ++ L+ G +I DRY S +A+ +G+ + W K A E
Sbjct: 59 PEAEYLLFSADRAEHVRKVILPALEEGFWVISDRYLDSSLAYQGYGQGLPLPWLKEVAKE 118
Query: 170 IGL-LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQML---RDSSWKII 223
L L PD LD+PPE+A +R +R E L F ++V Q Y L ++++
Sbjct: 119 ATLGLKPDLTFLLDLPPEEALKRVS-APDRLERMGLPFFQRVRQGYLKLAAAEPERFRVL 177
Query: 224 DACQSIEDVEKQLK 237
DA + +E+V+ ++
Sbjct: 178 DATRPVEEVQAAIR 191
>gi|403291588|ref|XP_003936865.1| PREDICTED: thymidylate kinase [Saimiri boliviensis boliviensis]
Length = 140
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 27/130 (20%)
Query: 131 MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAE 190
+++ KL G TL++DRY++SGVAFS AK + + AA+
Sbjct: 34 LIKEKLSQGVTLVMDRYAFSGVAFSGAKELQL-----------------------ADAAK 70
Query: 191 RGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSIEDVEKQLKEIVLDQVTAC 247
R +G ERYE+ FQ + QC+ Q++RD++ WK++DA +SIE V + + + D +
Sbjct: 71 RSAFGHERYENGAFQERALQCFHQLMRDTTVNWKVVDASKSIEAVHEDILVLSEDAIRTA 130
Query: 248 KKGKPFSLLW 257
+ KP LW
Sbjct: 131 TE-KPLGELW 139
>gi|121594087|ref|YP_985983.1| thymidylate kinase [Acidovorax sp. JS42]
gi|171769451|sp|A1W6N2.1|KTHY_ACISJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|120606167|gb|ABM41907.1| thymidylate kinase [Acidovorax sp. JS42]
Length = 217
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+ GA + EG+D GK+S L L GH+V L R P T ++ L + +
Sbjct: 2 TNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVALTREPGGTPLAEKLREMLLHDS--M 59
Query: 113 DDHTIHLL-FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPE- 169
D T LL F+A R R ++E L G ++ DR++ + A+ A +G D+E E
Sbjct: 60 DALTEALLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYMER 119
Query: 170 -----IGLLA-----PDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQML 215
+GL PD L+ D+PPE AA+R +R+E +EF +VA+ Y
Sbjct: 120 LAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSAARAPDRFESQPVEFFTRVARGYADR 179
Query: 216 RDSS---WKIIDACQSIEDVEKQLKEIV 240
+ + ID+ Q E V QL+ +V
Sbjct: 180 AAGAPQRFARIDSSQPREQVAAQLRAVV 207
>gi|410722046|ref|ZP_11361361.1| thymidylate kinase [Methanobacterium sp. Maddingley MBC34]
gi|410597852|gb|EKQ52459.1| thymidylate kinase [Methanobacterium sp. Maddingley MBC34]
Length = 191
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD--- 114
+ LEG+D GK++Q RL +LE G SV L R P + VGQ+I L + D+
Sbjct: 3 ICLEGIDGSGKSTQLERLGKWLEDCGFSVTLIREP-TDSPVGQLIRKMLQDPRAQDEGFQ 61
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R + + + ++ DR YS +A+ + + EW L
Sbjct: 62 RTLALLFAADRTLLMDNIRKEEEMNQIVLSDRSFYSSLAYQNGE----EWIAQINQHALE 117
Query: 175 PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIEDVE 233
PD V+ LD+ E A R G + +E F V Q Y ++ + + +++A + V
Sbjct: 118 PDLVILLDLEIETALTRCA-GTDSFEEANFLESVRQRYLKLAQQHGFMVVNAGNGVNKVH 176
Query: 234 KQLKEIVLDQVTAC 247
+K IV ++ C
Sbjct: 177 SDIKRIVAPKLGMC 190
>gi|381191065|ref|ZP_09898577.1| thymidylate kinase [Thermus sp. RL]
gi|380451154|gb|EIA38766.1| thymidylate kinase [Thermus sp. RL]
Length = 198
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GKT+Q RL ++L+ GH V L R P + ++ S L+ + L
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLDAXGHPVLLTREPG--GGLPEVRSLLLTQE--LSP 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LLFSA+R E R ++ L AG +I DRY S +A+ +G+ + W E+
Sbjct: 59 EAEYLLFSADRAEHVRKVILPGLAAGXVVISDRYLDSSLAYQGYGRGLPLPWLX--EVAR 116
Query: 173 -----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQML---RDSSWKI 222
L P LD+PPE AA R +R E LEF R+V + Y L + +
Sbjct: 117 EATRGLKPRLTFLLDLPPE-AALRRVRRPDRLESLGLEFFRRVREGYLALARAEPGRFVV 175
Query: 223 IDACQSIEDVEK 234
+DA E++ +
Sbjct: 176 LDATLPEEEIAR 187
>gi|215400691|ref|YP_002332309.1| putative thymidylate kinase [Lactococcus lactis]
gi|169641050|gb|ACA61269.1| putative thymidylate kinase [Lactococcus lactis]
Length = 251
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+ L+V EGLD GKT+Q L + E V + P + + YL N +
Sbjct: 54 KNLLIVFEGLDGSGKTTQIDMLYQWFENKKLKVFTTKQPTDYYRNDKRVRDYLDNGIAPN 113
Query: 114 DHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
++I LL +A+R ++ S + K+ + + +I DRY YS +AF A+GID + G+
Sbjct: 114 MYSIALLAAADRTYQITSEIFPKI-SESNIICDRYLYSSLAFFKARGIDYKEILMINKGV 172
Query: 173 LAPDSVLYLDIPPEKAAER 191
PD ++LD+PPE+A +R
Sbjct: 173 PTPDVTVFLDVPPERALDR 191
>gi|9628143|ref|NP_042729.1| thymidylate kinase [African swine fever virus]
gi|1170718|sp|P42490.1|KTHY_ASFB7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|402550|emb|CAA79604.1| thymidylate kinase [African swine fever virus]
gi|780405|gb|AAA65265.1| thymidylate kinase [African swine fever virus]
gi|162849246|emb|CAN10134.1| Thymidylate kinase [African swine fever virus Benin 97/1]
gi|162849418|emb|CAN10383.1| Thymidylate kinase [African swine fever virus OURT 88/3]
gi|291289479|emb|CBH29136.1| BA71V-A240L [African swine fever virus E75]
gi|1097424|prf||2113434AH thymidylate kinase
Length = 240
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++ GK++Q RL LE + ++ RFP+ T+ G +I L+ + +
Sbjct: 2 RGILITIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGGLILQVLNKMTEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ + E + + A LK +IVD Y +SG+A++ A GI IE +
Sbjct: 62 SEQLHKLFTKHHSEFSAEIAALLKLNFIVIVDHYIWSGLAYAQADGITIETK-----NIF 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>gi|410657465|ref|YP_006909836.1| Thymidylate kinase [Dehalobacter sp. DCA]
gi|410660502|ref|YP_006912873.1| Thymidylate kinase [Dehalobacter sp. CF]
gi|409019820|gb|AFV01851.1| Thymidylate kinase [Dehalobacter sp. DCA]
gi|409022858|gb|AFV04888.1| Thymidylate kinase [Dehalobacter sp. CF]
Length = 206
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDR---TTSVGQMISAYLSNQ 109
+G +VLEG+D GK +Q RL YLE + G L R P + T++ Q++S ++
Sbjct: 4 KGKFIVLEGIDGSGKGTQIERLKVYLETVRGVKTVLTREPSQGPLGTTIRQVLSGRING- 62
Query: 110 SHLDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
++D+ + LLF+A+R + +++ L+ G +I DRY +S A+ K D W
Sbjct: 63 --VNDNCLALLFAADRLDHNNNLVIPALEQGNYVICDRYLWSSFAYQGMKN-DESWIGEI 119
Query: 169 EIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQML 215
+ PD L++ + PE + +R G + E +E+ E R VA YQ L
Sbjct: 120 NQYAVKPDLTLFIKVSPETSLKRIAAGRFQTEIFENSEMLRHVADNYQKL 169
>gi|417849214|ref|ZP_12495139.1| dTMP kinase [Streptococcus mitis SK1080]
gi|339456841|gb|EGP69423.1| dTMP kinase [Streptococcus mitis SK1080]
Length = 212
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLETLLPILEETGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E LE +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLELHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KERNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|372272580|ref|ZP_09508628.1| thymidylate kinase [Marinobacterium stanieri S30]
Length = 225
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPD-RTTSVGQMISAYLSNQ-SH 111
+G ++V+EG+D GK +Q + +L L G E FP T G+ + YL+ +
Sbjct: 2 KGKIIVIEGIDGSGKNTQSNLILERLSKAGVKSEKISFPAYDETFFGKEVGNYLNGKFGG 61
Query: 112 LDDHTIHL---LFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIE----- 163
LDD L L++ +R+EK+ + KL G LI+DRY S +A ++K +IE
Sbjct: 62 LDDVNPKLAAMLYAGDRFEKKDYINEKLSEGYILIIDRYVPSNIAHQASKLDNIERDVLA 121
Query: 164 -WCKAPE---IGLLAPDSVLYLDIPPEKAAE 190
W E + PD V++LD+PP+ + E
Sbjct: 122 DWINQLEYYVYKMPKPDLVIFLDVPPKTSQE 152
>gi|281490597|ref|YP_003352577.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
gi|161702099|gb|ABX75570.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
Length = 199
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+ L+V EGLD GKT+Q L + E V + P + + YL N +
Sbjct: 2 KNLLIVFEGLDGSGKTTQIDMLHQWFENKKLEVFTTKQPTDYYRNDKRVRDYLDNGIAPN 61
Query: 114 DHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
++I LL +A+R ++ S + K+ + + +I DRY YS +AF A+GID + G+
Sbjct: 62 MYSIALLAAADRTYQISSEIFPKI-SESNIICDRYLYSSLAFFKARGIDYKEILMINKGV 120
Query: 173 LAPDSVLYLDIPPEKAAER 191
PD ++LD+PPE+A ER
Sbjct: 121 PIPDVTVFLDVPPERALER 139
>gi|293365189|ref|ZP_06611906.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
gi|307703727|ref|ZP_07640668.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
gi|419779033|ref|ZP_14304914.1| dTMP kinase [Streptococcus oralis SK10]
gi|291316639|gb|EFE57075.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
gi|307622562|gb|EFO01558.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
gi|383186797|gb|EIC79262.1| dTMP kinase [Streptococcus oralis SK10]
Length = 212
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P S+G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPG-GVSIGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRMVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|157151481|ref|YP_001450818.1| thymidylate kinase [Streptococcus gordonii str. Challis substr.
CH1]
gi|189030844|sp|A8AYF8.1|KTHY_STRGC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|157076275|gb|ABV10958.1| thymidylate kinase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 212
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG LV LEG D GK+S L+ LE GH V R P + + I + N +
Sbjct: 3 RGLLVSLEGPDGAGKSSVLEALVPILEAQGHQVVTTREPG-GVPISEAIREVILDQNNTE 61
Query: 112 LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEW 164
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+ DIEW
Sbjct: 62 MDGKTELLLYIASR--RQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEW 119
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQ--CYQMLR 216
L PD LY D+ E+ R R E LE ++V Q Y + +
Sbjct: 120 LNQYATDGLKPDLTLYFDLDVEEGLARIAKNKNREVNRLDLEGLEMHQRVRQGYLYSLEK 179
Query: 217 DSSWKI-IDACQSIEDVEK 234
D + IDA Q++EDV K
Sbjct: 180 DPERLVKIDASQALEDVVK 198
>gi|410693747|ref|YP_003624368.1| putative thymidylate kinase [Thiomonas sp. 3As]
gi|294340171|emb|CAZ88543.1| putative thymidylate kinase [Thiomonas sp. 3As]
Length = 215
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEG+D GK++Q ++ L V L R P T +G+ I L +++
Sbjct: 10 GLFISLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPG-GTEIGEKIRELLLHETMRPA 68
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPEIGL- 172
L+F+A + ++E L GT ++ DR++ + +A+ KGI E +A +
Sbjct: 69 TEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALARWVH 128
Query: 173 --LAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQMLRDSS---WKII 223
L PD ++ +D+PPE AA+R +R E ++F +V Y SS W++I
Sbjct: 129 PGLCPDCIILIDVPPEVAAQRLEQTRQRDRFEQESVDFFARVRANYLQQAASSPEKWRVI 188
Query: 224 DACQSIEDVEKQL 236
D Q+ E V+K +
Sbjct: 189 DGTQTPEAVQKTI 201
>gi|46199545|ref|YP_005212.1| thymidylate kinase [Thermus thermophilus HB27]
gi|55981576|ref|YP_144873.1| thymidylate kinase [Thermus thermophilus HB8]
gi|59798322|sp|Q72I89.1|KTHY_THET2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|73920831|sp|Q5SHX3.1|KTHY_THET8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|46197171|gb|AAS81585.1| probable thymidylate kinase [Thermus thermophilus HB27]
gi|55772989|dbj|BAD71430.1| probable thymidylate kinase (TMP kinase) [Thermus thermophilus HB8]
Length = 198
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GKT+Q RL ++LE G V L R P + ++ S L+ + L
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPG--GGLPEVRSLLLTQE--LSP 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LLFSA+R E R ++ L AG +I DRY S +A+ +G+ + W + E+
Sbjct: 59 EAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLR--EVAR 116
Query: 173 -----LAPDSVLYLDIPPEKAAERGGYGGERYE--HLEFQRKVAQCYQML---RDSSWKI 222
L P LD+PPE AA R +R E LEF R+V + Y L + +
Sbjct: 117 EATRGLKPRLTFLLDLPPE-AALRRVRRPDRLEGLGLEFFRRVREGYLALARAEPGRFVV 175
Query: 223 IDACQSIEDVEKQLK 237
+DA E++ + ++
Sbjct: 176 LDATLPEEEIARAIQ 190
>gi|225867971|ref|YP_002743919.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
gi|259494281|sp|C0MGT8.1|KTHY_STRS7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|225701247|emb|CAW98209.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
Length = 211
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG D GKT+ RL+ L+ LG ++ R P ++ + I + + SH
Sbjct: 2 TRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPG-GVAIAEKIRQLILDVSH 60
Query: 112 --LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+DD T LL+ A R + +M A L+AG ++VDR+ S VA+ A +G+D I+
Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPA-LEAGHLVLVDRFIDSSVAYQGAGRGLDKQAIQ 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W + PD LY D+P E R ER E L+ ++V + Y ++
Sbjct: 120 WLNHFATDGVDPDLTLYFDVPSELGLARIAQNTEREVNRLDLEQLDLHQRVRKGYLELAL 179
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q +E V
Sbjct: 180 ENPQRIVKIDASQDLESV 197
>gi|307706440|ref|ZP_07643249.1| thymidylate kinase [Streptococcus mitis SK321]
gi|307618150|gb|EFN97308.1| thymidylate kinase [Streptococcus mitis SK321]
Length = 212
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + N SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVVVLRTREPGGVL-IGEKIREVILNPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 ---SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
S IDA +E V + K ++ D++ K
Sbjct: 179 KEGSRIVKIDASFPLEQVVETTKAVLFDRMGLVK 212
>gi|150400777|ref|YP_001324543.1| thymidylate kinase [Methanococcus aeolicus Nankai-3]
gi|166221752|sp|A6UTV9.1|KTHY_META3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|150013480|gb|ABR55931.1| dTMP kinase [Methanococcus aeolicus Nankai-3]
Length = 196
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+Q L YL G+ + +GQ+I L + + + +
Sbjct: 4 FIVFEGIDGSGKTTQAKLLADYLNGI------YTCEPTNGEIGQLIRKVLGGK-NCEKES 56
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+ +R E +E KL +I DRY YS + + S +GIDI++ + PD
Sbjct: 57 LALLFAGDRVEHIKEIEHKL-IENMVICDRYVYSSMVYQSIQGIDIDFIASINRFAKIPD 115
Query: 177 SVLYLDIPPEKAAERGG--YGGERYEHLEFQRKVAQCYQMLRD-------SSWKIIDA-C 226
++YLD+ E++ +R G E +E+ E +KV + Y + + + + +I+
Sbjct: 116 VLIYLDVSIEESLKRMGDRDSKEIFENKEILQKVNKKYMNIINERLFEPKNGYILINTDN 175
Query: 227 QSIEDVEKQLKEIVLDQ 243
+++E+V K++ + ++D+
Sbjct: 176 KTVEEVHKEIIKKLMDK 192
>gi|51246661|ref|YP_066545.1| thymidylate kinase [Desulfotalea psychrophila LSv54]
gi|59798232|sp|Q6AJE2.1|KTHY_DESPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|50877698|emb|CAG37538.1| related to thymidylate kinase [Desulfotalea psychrophila LSv54]
Length = 202
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
++ G L++ EG D GK++Q L +YL G V + F GQ I ++++
Sbjct: 3 NNPGKLIIFEGTDGAGKSTQIKMLANYLRSKGLDV-IASFEPTNGPYGQKIRQLYTDRNK 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+ + LF A+R E ++ + AG ++ DRY S A+ A G D+E
Sbjct: 62 VTRNEELELFLADRREHVNKLINPAISAGKIVLCDRYYLSTAAYQGALGFDVEEILQRNS 121
Query: 171 GLLAPDSVLYLDIPPEKAAER----GGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDAC 226
PD L L IP E R G +E E KV+ + L + I+AC
Sbjct: 122 FAPTPDLALLLQIPVEDGRRRITSSRGEETNDFEKAEMLEKVSTIFNSLSFPYIRHINAC 181
Query: 227 QSIEDVEKQL 236
QSI++V++ +
Sbjct: 182 QSIDNVQRDI 191
>gi|215275164|sp|P0C8G2.1|KTHY_ASFWA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 239
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++ GK++Q RL LE + ++ RFP+ T+ G +I L+ +
Sbjct: 2 RGILIAIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ + E + + A LK +IVDRY +SG+A++ A GI IE
Sbjct: 62 SEQLHKLFTKHCSEFVAEIAALLKLNFIVIVDRYIWSGLAYAQADGITIETKNT-----F 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>gi|366163927|ref|ZP_09463682.1| thymidylate kinase [Acetivibrio cellulolyticus CD2]
Length = 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + EG D GKT+Q + SYL+G G V + R P TS+G+ I + + + + D
Sbjct: 3 RGLFITTEGTDGSGKTTQIKLIESYLKGKGFEVVVTREPG-GTSIGEKIRSIILDTENSD 61
Query: 114 DHTI--HLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC-KAP 168
I +L+++ R + +++ L G +I DR+ S + + IDIE +
Sbjct: 62 MAYITEMMLYASARAQLVNELIKPSLSEGKVVICDRFIDSSYVYQGFGRNIDIELIERVN 121
Query: 169 EIGL--LAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQMLRDSSWKI 222
I L + PD L+ DI PE A ER G +R E ++F RKV Y+ L
Sbjct: 122 RIALDGIMPDVTLFFDIDPEVALERRIQSTGADRIEREAMDFHRKVYNGYKKLASMYPDR 181
Query: 223 IDACQSIEDVEKQLKEI 239
I A +S ++E+ ++
Sbjct: 182 IKAIESNRNIEEIFSDV 198
>gi|383456662|ref|YP_005370651.1| thymidylate kinase [Corallococcus coralloides DSM 2259]
gi|380734505|gb|AFE10507.1| thymidylate kinase [Corallococcus coralloides DSM 2259]
Length = 218
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS------- 107
G +VLEGLD G T+Q RL S L G SV R P VG M+ L+
Sbjct: 11 GRFIVLEGLDGAGTTTQTERLASALRADGLSVVTTREPS-DGPVGTMLRQALTGRLGLPQ 69
Query: 108 NQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
+ L T+ LLF+A+R + + + L+ G ++ DRY S +A+ A + + W
Sbjct: 70 GRGPLAQETLALLFAADRTDHLHARVLPALEQGKVVLCDRYVLSSLAYQGAS-LPMAWVD 128
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGG---ERYEHLEFQRKVAQCYQ---MLRDSSW 220
++PD L++ + P+ AA+R G E +E E QR++A+ Y LR
Sbjct: 129 TVNAHAVSPDLTLFVGVDPKVAAKRRAVRGGPAELFEADEAQRRIAKQYLKAITLRAKRE 188
Query: 221 KI--IDACQSIEDVEKQ-LKEI 239
+I ID S+E V LKE+
Sbjct: 189 RIVHIDGELSVEAVTDACLKEV 210
>gi|150399111|ref|YP_001322878.1| thymidylate kinase [Methanococcus vannielii SB]
gi|166221757|sp|A6UP44.1|KTHY_METVS RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|150011814|gb|ABR54266.1| dTMP kinase [Methanococcus vannielii SB]
Length = 198
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
+V EG+D GKT+Q L L + T +G+ I LS S
Sbjct: 2 NKFIVFEGIDGSGKTTQAKMLAEKLNAE------YTCEPTTGKIGRTIREVLSG-SECKK 54
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R E S +E L+ + ++ DRY YS + + + +GI E+ +
Sbjct: 55 ETLALLFAADRVEHVSEIEKMLQK-SHVVTDRYVYSSIIYQTMQGISKEFIYSINFFAKI 113
Query: 175 PDSVLYLDIPPEKAAERGGY-GGERYEHLEFQRKVAQCYQMLRD 217
PD V+ LD+ E+A +R + E +E +EFQ+K+ Q Y + +
Sbjct: 114 PDIVVILDVDTEEALKRMEFREKEIFEKIEFQKKIKQEYHKIAE 157
>gi|441152495|ref|ZP_20966039.1| thymidylate kinase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618681|gb|ELQ81746.1| thymidylate kinase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 1075
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 23/256 (8%)
Query: 6 SFTLSKALNFGALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGNIDS----RGALVVLE 61
+FTL + GAL + + + L + S P + +LR G+ D G + LE
Sbjct: 462 AFTL---MLVGALLLPVAAWVLGKVDDRSGVPLGRDLREALRGGDPDQAPAPTGFFIALE 518
Query: 62 GLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSHLDDHTIHL 119
G D GK++Q L ++ G GH V + R P T++G+ + + + + S L D L
Sbjct: 519 GGDGAGKSTQVQALAEWIRGKGHEVVVTREPG-ATAIGKRLRSIILDVSTSGLSDRAEAL 577
Query: 120 LFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSV 178
+F+A+R E S++ L+ G +I DRY S VA+ A G ++ + I A D +
Sbjct: 578 MFAADRAEHVNSVIRPALERGAVVITDRYIDSSVAYQGA-GRNLAPTEIARISRWATDGL 636
Query: 179 -----LYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WKIIDACQS 228
+ LD+ PE A ER +R E EF ++V + L + + ++DA Q
Sbjct: 637 VPHLTVLLDVSPETARERFTEAPDRMESEPAEFHQRVRSGFLTLAAADPARYLVVDAGQE 696
Query: 229 IEDVEKQLKEIVLDQV 244
E V ++ LDQV
Sbjct: 697 PEAVTTVVRH-RLDQV 711
>gi|290558930|gb|EFD92317.1| thymidylate kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 202
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G ++V+EG+D GK +Q L LE G +V + +PD ++ G I ++L + +
Sbjct: 3 GKIIVIEGIDGAGKATQSKLLKEKLESNGITVSSYSYPDYSSVYGARIKSFLYKEIKIKV 62
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA--PEIGL 172
+ +L+ + + R M +LK+G +I+DR+ +S +A+ SA G D + CK +
Sbjct: 63 DELFMLYLIDMVKDREKMINELKSGNYIIIDRFFFSTIAYQSAGGFDYDNCKKIIKLFDM 122
Query: 173 LAPDSVLYLDIPPE-----KAAERGGYGGERYE-HLEFQRKVAQCYQMLRDSS-----WK 221
P+ ++D+P + K ++G +++E + F + V+ Y+ L + + WK
Sbjct: 123 PVPEITFFIDVPVDVSMSRKEKQKGKLDVDKFESNKVFLQNVSLYYKKLMEENFYSKKWK 182
Query: 222 IIDACQSIEDV 232
ID IE++
Sbjct: 183 RIDGNLKIEEI 193
>gi|195978711|ref|YP_002123955.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975416|gb|ACG62942.1| thymidylate kinase Tmk [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 232
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG D GKT+ RL+ L+ LG ++ R P ++ + I + + SH
Sbjct: 23 TRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPG-GVAIAEKIRQLILDVSH 81
Query: 112 --LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+DD T LL+ A R + +M A L++G ++VDR+ S VA+ A +G+D I+
Sbjct: 82 TTMDDKTELLLYIAARRQHLVEKIMPA-LESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQ 140
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W + PD LY D+P E R ER E L+ ++V + Y ++
Sbjct: 141 WLNHFATDGVDPDLTLYFDVPSELGLARIAQNTEREINRLDLEQLDLHQRVRKGYLELAL 200
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q +E V
Sbjct: 201 ENPQRIVKIDASQDLESV 218
>gi|414564671|ref|YP_006043632.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847736|gb|AEJ25948.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 256
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG D GKT+ RL+ L+ LG ++ R P ++ + I + + SH
Sbjct: 47 TRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPG-GVAIAEKIRQLILDVSH 105
Query: 112 --LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+DD T LL+ A R + +M A L++G ++VDR+ S VA+ A +G+D I+
Sbjct: 106 TTMDDKTELLLYIAARRQHLVEKIMPA-LESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQ 164
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W + PD LY D+P E R ER E L+ ++V + Y ++
Sbjct: 165 WLNHFATDGVDPDLTLYFDVPSELGLARIAQNTEREINRLDLEQLDLHQRVRKGYLELAL 224
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q +E V
Sbjct: 225 ENPQRIVKIDASQDLESV 242
>gi|409100229|ref|ZP_11220253.1| thymidylate kinase [Pedobacter agri PB92]
Length = 207
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+ + EG+D GK++Q L L GH + F + +G +I + + D
Sbjct: 3 KNLFIAFEGIDGSGKSTQVKLLKEKLSKDGHKI-YSTFEPTDSPIGSLIRNIFNRRIETD 61
Query: 114 DHTIHLLFSANRWE----KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW---CK 166
+ I LF A+R + K + + K++ G T+I DRY +S A+ SA I ++W
Sbjct: 62 ERAIASLFVADRLDHLLNKTNGIVKKMQEGYTVITDRYYFSSYAYHSAT-ISLDWLIEAN 120
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGER-----YEHLEFQRKVAQCYQ--MLRDSS 219
+ +L PD +Y+DI PE + ER ER YE++E + V++ Y+ +R +
Sbjct: 121 SLSANILKPDLNIYIDIDPEISIER--LNSERSNIEIYENIENLKIVSKKYKEAFVRLGA 178
Query: 220 WK---IIDACQSIEDVEKQLKEIVLDQVTACKK 249
+ +ID SI D+ + + D+V + K
Sbjct: 179 VENVFLIDGNNSINDLSNK----IFDKVQSMSK 207
>gi|149010423|ref|ZP_01831794.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75]
gi|168485884|ref|ZP_02710392.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00]
gi|182683879|ref|YP_001835626.1| thymidylate kinase [Streptococcus pneumoniae CGSP14]
gi|303254972|ref|ZP_07341051.1| thymidylate kinase [Streptococcus pneumoniae BS455]
gi|303259845|ref|ZP_07345820.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293]
gi|303262259|ref|ZP_07348203.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292]
gi|303264681|ref|ZP_07350599.1| thymidylate kinase [Streptococcus pneumoniae BS397]
gi|303267182|ref|ZP_07353049.1| thymidylate kinase [Streptococcus pneumoniae BS457]
gi|303269430|ref|ZP_07355199.1| thymidylate kinase [Streptococcus pneumoniae BS458]
gi|405761061|ref|YP_006701657.1| thymidylate kinase [Streptococcus pneumoniae SPNA45]
gi|418139281|ref|ZP_12776111.1| thymidylate kinase [Streptococcus pneumoniae GA13338]
gi|418180389|ref|ZP_12816960.1| thymidylate kinase [Streptococcus pneumoniae GA41688]
gi|418184749|ref|ZP_12821296.1| thymidylate kinase [Streptococcus pneumoniae GA47283]
gi|418189165|ref|ZP_12825680.1| thymidylate kinase [Streptococcus pneumoniae GA47373]
gi|418199848|ref|ZP_12836293.1| thymidylate kinase [Streptococcus pneumoniae GA47976]
gi|419495249|ref|ZP_14034967.1| thymidylate kinase [Streptococcus pneumoniae GA47461]
gi|419510555|ref|ZP_14050199.1| thymidylate kinase [Streptococcus pneumoniae NP141]
gi|419523270|ref|ZP_14062850.1| thymidylate kinase [Streptococcus pneumoniae GA13723]
gi|419530269|ref|ZP_14069799.1| thymidylate kinase [Streptococcus pneumoniae GA40028]
gi|421206381|ref|ZP_15663442.1| thymidylate kinase [Streptococcus pneumoniae 2090008]
gi|421212980|ref|ZP_15669941.1| thymidylate kinase [Streptococcus pneumoniae 2070108]
gi|421215163|ref|ZP_15672091.1| thymidylate kinase [Streptococcus pneumoniae 2070109]
gi|421229576|ref|ZP_15686249.1| thymidylate kinase [Streptococcus pneumoniae 2061376]
gi|421291805|ref|ZP_15742543.1| thymidylate kinase [Streptococcus pneumoniae GA56348]
gi|421296073|ref|ZP_15746785.1| thymidylate kinase [Streptococcus pneumoniae GA58581]
gi|421303151|ref|ZP_15753815.1| thymidylate kinase [Streptococcus pneumoniae GA17484]
gi|421311674|ref|ZP_15762281.1| thymidylate kinase [Streptococcus pneumoniae GA58981]
gi|238691153|sp|B2IP90.1|KTHY_STRPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|147764904|gb|EDK71833.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75]
gi|182629213|gb|ACB90161.1| thymidylate kinase [Streptococcus pneumoniae CGSP14]
gi|183570969|gb|EDT91497.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00]
gi|302598052|gb|EFL65119.1| thymidylate kinase [Streptococcus pneumoniae BS455]
gi|302636582|gb|EFL67073.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292]
gi|302639050|gb|EFL69510.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293]
gi|302641049|gb|EFL71427.1| thymidylate kinase [Streptococcus pneumoniae BS458]
gi|302643297|gb|EFL73577.1| thymidylate kinase [Streptococcus pneumoniae BS457]
gi|302645768|gb|EFL75997.1| thymidylate kinase [Streptococcus pneumoniae BS397]
gi|353846001|gb|EHE26039.1| thymidylate kinase [Streptococcus pneumoniae GA41688]
gi|353851285|gb|EHE31281.1| thymidylate kinase [Streptococcus pneumoniae GA47283]
gi|353856307|gb|EHE36276.1| thymidylate kinase [Streptococcus pneumoniae GA47373]
gi|353864895|gb|EHE44804.1| thymidylate kinase [Streptococcus pneumoniae GA47976]
gi|353905524|gb|EHE80947.1| thymidylate kinase [Streptococcus pneumoniae GA13338]
gi|379558001|gb|EHZ23038.1| thymidylate kinase [Streptococcus pneumoniae GA13723]
gi|379574268|gb|EHZ39212.1| thymidylate kinase [Streptococcus pneumoniae GA40028]
gi|379595331|gb|EHZ60139.1| thymidylate kinase [Streptococcus pneumoniae GA47461]
gi|379633748|gb|EHZ98317.1| thymidylate kinase [Streptococcus pneumoniae NP141]
gi|395576295|gb|EJG36851.1| thymidylate kinase [Streptococcus pneumoniae 2090008]
gi|395580567|gb|EJG41048.1| thymidylate kinase [Streptococcus pneumoniae 2070108]
gi|395581296|gb|EJG41768.1| thymidylate kinase [Streptococcus pneumoniae 2070109]
gi|395596388|gb|EJG56606.1| thymidylate kinase [Streptococcus pneumoniae 2061376]
gi|395894022|gb|EJH05003.1| thymidylate kinase [Streptococcus pneumoniae GA56348]
gi|395897286|gb|EJH08250.1| thymidylate kinase [Streptococcus pneumoniae GA58581]
gi|395901773|gb|EJH12709.1| thymidylate kinase [Streptococcus pneumoniae GA17484]
gi|395912252|gb|EJH23115.1| thymidylate kinase [Streptococcus pneumoniae GA58981]
gi|404277950|emb|CCM08520.1| thymidylate kinase [Streptococcus pneumoniae SPNA45]
Length = 212
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E LE +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLELHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMDLAK 212
>gi|327310490|ref|YP_004337387.1| dTMP kinase [Thermoproteus uzoniensis 768-20]
gi|326946969|gb|AEA12075.1| dTMP kinase [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G V +EG+D GK++ L L + + P +G++I ++ D
Sbjct: 2 GLFVAIEGIDGSGKSTVIEELRKIL-----PIYATKEPS-DGPIGRLIKSWALRGGTTDP 55
Query: 115 HTIHLLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ LLF+A+R + +R + A L G ++ +RY S +A+ A G+DI++ + +
Sbjct: 56 YVDALLFAADRLDHYQREIAPA-LGEGRVVVTERYVESSIAYQGAAGVDIKFIELINARV 114
Query: 173 LAPDSVLYLDIPPEKA----AERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQ 227
APD + LDI PEKA + R GY E+YE LEF + V Y + + + +++A +
Sbjct: 115 PAPDITVLLDIEPEKAVARVSARSGY-VEKYERLEFLKAVRSIYLRRAAERGYVVLNAEE 173
Query: 228 SIEDVEKQLKEIV 240
E + +++ E++
Sbjct: 174 PPEAIARRIAEMI 186
>gi|372489281|ref|YP_005028846.1| thymidylate kinase [Dechlorosoma suillum PS]
gi|359355834|gb|AEV27005.1| thymidylate kinase [Dechlorosoma suillum PS]
Length = 203
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + EG+D GK++ L L G +V R P T ++ + L+ HL+
Sbjct: 2 RGKFITFEGIDGAGKSTHIQWLADQLTARGKTVVTTREPGGTPLGEKLRALLLAEPMHLE 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKAPEI-- 170
+ L+F+A R ++E L AGT +I DR++ + VA+ +G+ ++ K E
Sbjct: 62 TEAL-LMFAARREHLAEVIEPALAAGTWVISDRFTDATVAYQGGGRGLSLDKLKVLEDWV 120
Query: 171 -GLLAPDSVLYLDIPPEKAAERGGYGGERY------EHLEFQRKVAQCYQMLRDSS---W 220
G L PD L D+P A R G ER E +F +V QCY S
Sbjct: 121 HGHLQPDLTLLFDLPLAVAQAR--IGKERILDRFEQEEADFHERVRQCYLQRAGQSNGRI 178
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+++ A +++++++K ++E++
Sbjct: 179 RVVQADRTVDEIKKSIEELI 198
>gi|220927615|ref|YP_002504524.1| thymidylate kinase [Clostridium cellulolyticum H10]
gi|219997943|gb|ACL74544.1| thymidylate kinase [Clostridium cellulolyticum H10]
Length = 206
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + +EG D GKT+Q + YL+ +G+ V L R P T + +MI + + + D
Sbjct: 3 KGLFITVEGTDGSGKTTQIKLMEQYLKDMGNEVVLSREPG-GTRISEMIRDLILDPENKD 61
Query: 114 DH--TIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW---CK 166
T +L++A R + S ++ +++G ++I DR+ S A+ +G+D++
Sbjct: 62 ISPLTEMMLYAAARAQHVSQVIRPAIESGKSVICDRFVDSSYAYQGCGRGVDLKTIADVN 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQ---MLRDSS 219
I + PD +LD+ P A ER G +R E ++F +V + Y+ +L
Sbjct: 122 RAAIDGVVPDITFFLDLDPRVAMERRVKSTGADRIEQEKMDFHIRVYEGYERMALLYPER 181
Query: 220 WKIIDACQSIEDVEKQ----LKEIV 240
K IDA +SIE++ Q LKEI+
Sbjct: 182 IKTIDASKSIEEISSQINIYLKEIL 206
>gi|345016544|ref|YP_004818897.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940117|ref|ZP_10305761.1| thymidylate kinase [Thermoanaerobacter siderophilus SR4]
gi|344031887|gb|AEM77613.1| Thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291867|gb|EIW00311.1| thymidylate kinase [Thermoanaerobacter siderophilus SR4]
Length = 203
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 19/202 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG + EG+D CGKT+Q L YL G+++ + R P T VG+ + L ++++ +
Sbjct: 2 RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPG-GTKVGEKVRDILLDKNNFI 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K L+ G +I+DR+ S + A+G+ IE K
Sbjct: 61 SPVTEMLLYASSRAQ---LVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKL 117
Query: 167 APEIGLLA--PDSVLYLDIPPEKAAE-RGGYGGERYEHL--EFQRKVAQCY-QMLRD--S 218
EI + PD +Y+DI PE+A + RG +R E EF +KV + Y +++++
Sbjct: 118 VNEIATMGILPDVTIYIDITPEEAMKRRGKREADRLEKESWEFHKKVREGYIKLVKEFPK 177
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
+ ID Q + V + + ++V
Sbjct: 178 RFVFIDGMQELMKVHQDIIDVV 199
>gi|337286432|ref|YP_004625905.1| thymidylate kinase [Thermodesulfatator indicus DSM 15286]
gi|335359260|gb|AEH44941.1| thymidylate kinase [Thermodesulfatator indicus DSM 15286]
Length = 380
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ +EGLD GK++ L LE G V + R P + GQ I +L+ S +
Sbjct: 177 GFLIAIEGLDGSGKSTFIKGLAQKLEEKGEKVCVTREPT-SGEWGQKIREHLAAGSKISP 235
Query: 115 HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-EWCKAPEIGL 172
+ LF +R E ++ + KL+ G ++ DRY S +A+ A +DI E KA E
Sbjct: 236 QAMAELFLRDRREHAQNFLIPKLQDGQIILCDRYYLSTMAYQGACELDIKEIKKANETWA 295
Query: 173 LAPDSVLYLDIPPEKAAERGG----YGGERYEHLEFQRKVAQCYQ-MLRDSSWKIIDACQ 227
PD +LYL + E+A +R Y E +E EF KVA Y+ L+ +IIDA
Sbjct: 296 PVPDLILYLKVSVEEALKRVNQRKFYKPEVFETQEFLTKVASIYENNLKYFRHEIIDASA 355
Query: 228 SIEDV 232
S E+V
Sbjct: 356 SPEEV 360
>gi|87301810|ref|ZP_01084644.1| Thymidylate kinase [Synechococcus sp. WH 5701]
gi|87283378|gb|EAQ75333.1| Thymidylate kinase [Synechococcus sp. WH 5701]
Length = 224
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 16/215 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLE--GL---GHSVELWRFPDRTT--SVGQMISAYL 106
RG +VLEG+D GK+SQ RL ++L GL G S+ R P T + + +
Sbjct: 8 RGRFLVLEGIDGSGKSSQLERLAAWLPRSGLMPAGASLVTSREPGGTPLGQGLRQLLLHP 67
Query: 107 SNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID--- 161
++ LL++A+R + +S++E L AG ++ DR++ S A+ +G+
Sbjct: 68 PEEAAPVARAELLLYAADRAQHVQSLIEPALAAGHWVLSDRFAGSTAAYQGHGRGLSLDL 127
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGY-GGERYE--HLEFQRKVAQCY-QMLRD 217
I+ +A G L+PD L+LD+P +A+R G+ G +R E L F +V+ + Q+ +
Sbjct: 128 IDQLEAIATGGLSPDLTLWLDLPLAISADRRGHRGADRIEAAGLPFLERVSDGFAQLAAE 187
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKP 252
W +DA S +VE L+ +L++ G P
Sbjct: 188 RGWSRVDAAGSPAEVESALRAALLERFPRAWPGDP 222
>gi|333988072|ref|YP_004520679.1| thymidylate kinase [Methanobacterium sp. SWAN-1]
gi|333826216|gb|AEG18878.1| Thymidylate kinase [Methanobacterium sp. SWAN-1]
Length = 191
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH-- 115
+ LEG+D GK++Q L +L GH V L F + VG++I L N D++
Sbjct: 3 ICLEGIDGSGKSTQIKLLEQWLYNCGHEV-LRVFEPTDSKVGRLIREMLRNPHATDENFQ 61
Query: 116 -TIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
T+ LLF+A+R +M+ + A G +I DR YS +A+ + EW
Sbjct: 62 RTLGLLFAADR---TILMDKIIDAEVEGKVVISDRCFYSSIAYQNGA----EWLSQINKF 114
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIE 230
PD VL LD+ PE A R G + +E F K+ + Y ++ ++ + +++A I
Sbjct: 115 ARKPDLVLLLDLEPETALMRCE-GKDSFEDRSFLEKIRKKYLKLAKEEEFFVVNANNGIN 173
Query: 231 DVEKQLKEIVLDQVTAC 247
V + +K IV ++ C
Sbjct: 174 KVHEDIKRIVARRLGMC 190
>gi|225166283|ref|ZP_03727978.1| dTMP kinase [Diplosphaera colitermitum TAV2]
gi|224799474|gb|EEG18008.1| dTMP kinase [Diplosphaera colitermitum TAV2]
Length = 234
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 20/216 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ LEG + CGK++Q +RL +++ LG V R P T +G+ + + + S D+
Sbjct: 10 GKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPG-GTEIGEQVRNIIVHNSKGDE 68
Query: 115 ---HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRY-----SYSGVAFSSAKGIDIEWC 165
T LLF+A+R + R ++ +L G ++ DR+ Y GVA + A +
Sbjct: 69 MCAETELLLFAASRAQLVREVIAPRLLRGEIVLSDRFLDSSTVYQGVARNLAMD-PVNLI 127
Query: 166 KAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERY--EHLEFQRKVAQCYQMLRDS- 218
+G + PD + LD+PPE + R +R E+++F KV + Y L S
Sbjct: 128 NQFAVGNVMPDLTIILDVPPEVSLARINRRASDLPDRMERENIDFYHKVREGYLFLAKSL 187
Query: 219 --SWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKP 252
++ ++D Q+ ++V K + + VL +T + +P
Sbjct: 188 PRAFLVLDGTQTEDEVAKHIWDEVLKLITKTETVEP 223
>gi|149037471|gb|EDL91902.1| deoxythymidylate kinase (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 126
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDS 218
++WCK P++GL PD +L+L + AA RG +G ERYE FQ +V C+Q L ++
Sbjct: 28 LDWCKQPDVGLPKPDLILFLQLQLLDAASRGEFGLERYETGTFQEQVLLCFQQLMSEKNL 87
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFSLLW 257
+WK++DA +SIEDV ++++ + D + + +P LW
Sbjct: 88 NWKVVDASKSIEDVHEEIRALSEDAIQNAAQ-RPLEELW 125
>gi|225871114|ref|YP_002747061.1| thymidylate kinase [Streptococcus equi subsp. equi 4047]
gi|254808305|sp|C0M7M5.1|KTHY_STRE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|225700518|emb|CAW94978.1| thymidylate kinase [Streptococcus equi subsp. equi 4047]
Length = 211
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG D GKT+ RL+ L+ LG ++ R P ++ + I + + SH
Sbjct: 2 TRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPG-GVAIAEKIRQLILDVSH 60
Query: 112 --LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+DD T LL+ A R + +M A L++G ++VDR+ S VA+ A +G+D I+
Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPA-LESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQ 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W + PD LY D+P E R ER E L+ ++V + Y ++
Sbjct: 120 WLNHFATDGVDPDLTLYFDVPSELGLARIAQNTEREINRLDLEQLDLHQRVRKGYLELAL 179
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q +E V
Sbjct: 180 ENPQRIVKIDASQDLESV 197
>gi|268323396|emb|CBH36984.1| thymidylate kinase [uncultured archaeon]
Length = 204
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GK +Q L L G V + +PD + G++I +L + +L
Sbjct: 2 LINFEGIDGSGKRTQSKLLKKELLKKGFKVADFSYPDYDSEYGKLIKGFLEAKLNLSSDE 61
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE--IGLLA 174
LL+ + + + + KL+ G +I+DRY S +A+ SA D E KA I L
Sbjct: 62 QFLLYLIDIVKNKEEVIQKLRKGHVVIMDRYFLSTIAYQSANNFDYEVAKAVTKLIQLPL 121
Query: 175 PDSVLYLDIPPEKAAERGGYGG---ERYE-HLEFQRKVAQCYQML-----RDSSWKIIDA 225
P + Y++IP + A+ R +R+E + EF KV Y+ L SSW +D
Sbjct: 122 PSVIFYIEIPLDIASRRKSKQKGIVDRFEGNTEFLTKVVNVYERLIQEQFPSSSWIKLDG 181
Query: 226 CQ 227
+
Sbjct: 182 TE 183
>gi|188584675|ref|YP_001916220.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349362|gb|ACB83632.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 206
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
RG + EG+D CGK++Q ++ S L+ LG +V R P TSVG I L H
Sbjct: 4 RGKFITFEGIDGCGKSTQLKKVTSKLKKLGFNVVSTREPG-GTSVGDAIREILLAPKHYN 62
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA--P 168
+ T LL++A+R + + L ++ DR+ S VA+ K E + P
Sbjct: 63 MTIETEALLYAASRVQHIEEFIIPNLAEDNIVLCDRFVDSSVAYQGIKLSHEEVIRVNQP 122
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK---II 223
+ PD +DI PE+AA+R G +R E+ + +Q +V + Y L + II
Sbjct: 123 AYDKVTPDITFLIDITPERAAKRLGIEKDRIENRGVNYQSQVRENYLFLAEEEPDRIVII 182
Query: 224 DACQSIEDVEKQLKEIVLD 242
+ QS E V ++L ++ D
Sbjct: 183 NGDQSEEKVFEELWNVLED 201
>gi|332528360|ref|ZP_08404360.1| thymidylate kinase [Hylemonella gracilis ATCC 19624]
gi|332042231|gb|EGI78557.1| thymidylate kinase [Hylemonella gracilis ATCC 19624]
Length = 211
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G V EG+D GK++ RL L GH V L R P T ++ + L+ + +D
Sbjct: 3 GFFVSFEGIDGAGKSTHIERLAQVLREQGHMVTLTREPGGTPLAERLRALVLAEK--MDA 60
Query: 115 HTIHLL-FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDI-------EWC 165
T LL F+A R ++++E L G ++ DRY+ + A+ +G+D+ W
Sbjct: 61 LTEALLVFAARRDHLQTVIEPALARGDAVLCDRYTDASYAYQGGGRGLDVSVLATLERWV 120
Query: 166 KAPE--IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCY--QMLRD 217
+A GL PD L+ D+ PE AAER G +++E + F R+VA+ Y + D
Sbjct: 121 QAKPGAAGLRQPDLTLWFDLAPELAAERLSGARAPDKFEAEPVAFFRRVAEGYARRAAED 180
Query: 218 SS-WKIIDACQSIEDVEKQLKEIV 240
+ +DA QS E V +L +V
Sbjct: 181 PGRFARLDAAQSREAVWDELLRVV 204
>gi|73668631|ref|YP_304646.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
gi|121722245|sp|Q46DH6.1|KTHY_METBF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|72395793|gb|AAZ70066.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
Length = 205
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ +L E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAI--QSDTD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L+ G +I DRYS Y G+ + +EW K
Sbjct: 60 QFAELFLFTADHAEHLAKLIKPALENGKIVISDRYSDSRYAYQGITLKTRLENPLEWVKD 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQML---RDSSWK 221
+ PD DI PE + ER G GE ++E LEF + V + L +
Sbjct: 120 LHRSWTIVPDLTFLFDIRPEISIERCGKRGEQSKFEKLEFLQGVRAIFLKLAADDPERFV 179
Query: 222 IIDACQSIEDVEKQLKEIVLD 242
+IDA +S E +EK++ + +L+
Sbjct: 180 VIDASRSPEYIEKEVVKKILE 200
>gi|347449896|gb|AEO93937.1| gp694 [Bacillus phage G]
Length = 240
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 35/220 (15%)
Query: 60 LEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHLDD---H 115
EGLD K +Q + L+SYLE G+ V FP+ + +G++IS+YL + L+D
Sbjct: 24 FEGLDGSSKETQTNNLISYLEKEGYKVLKVDFPNYDSPIGEVISSYLRGEFGKLEDVPLK 83
Query: 116 TIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKG--------ID-IEWCK 166
I +++S++R + +E +K G +I +RY+YS + F +AK ID IE +
Sbjct: 84 LISMVYSSDRARYANTIENHIKNGGVVIANRYTYSNL-FHAAKMEKEERTEFIDWIEEIE 142
Query: 167 APEIGLLAPDSVLYLDIPP----EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
E+ + PD YL + P ++ ERG G +Q ++ ++S +
Sbjct: 143 FNEMKVFQPDYNFYLYVDPTISLKRIEERGKRG--------YQEGKEDIHE---NNSKLL 191
Query: 223 IDACQSIEDVEKQLKE-IVLDQVTACKKGK--PFSLLWSC 259
ID ++ D K +++DQ+ KKGK P +++
Sbjct: 192 IDTAETYLDFAKSRDNWVIIDQM---KKGKQLPIDVVFEM 228
>gi|225861172|ref|YP_002742681.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230558|ref|ZP_06964239.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254568|ref|ZP_06978154.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298503053|ref|YP_003724993.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A]
gi|387788390|ref|YP_006253458.1| thymidylate kinase [Streptococcus pneumoniae ST556]
gi|417312507|ref|ZP_12099219.1| thymidylate kinase [Streptococcus pneumoniae GA04375]
gi|418082862|ref|ZP_12720063.1| thymidylate kinase [Streptococcus pneumoniae GA44288]
gi|418085002|ref|ZP_12722186.1| thymidylate kinase [Streptococcus pneumoniae GA47281]
gi|418093766|ref|ZP_12730895.1| thymidylate kinase [Streptococcus pneumoniae GA49138]
gi|418100763|ref|ZP_12737849.1| thymidylate kinase [Streptococcus pneumoniae 7286-06]
gi|418118774|ref|ZP_12755731.1| thymidylate kinase [Streptococcus pneumoniae GA18523]
gi|418141523|ref|ZP_12778336.1| thymidylate kinase [Streptococcus pneumoniae GA13455]
gi|418150402|ref|ZP_12787153.1| thymidylate kinase [Streptococcus pneumoniae GA14798]
gi|418152668|ref|ZP_12789408.1| thymidylate kinase [Streptococcus pneumoniae GA16121]
gi|418157599|ref|ZP_12794315.1| thymidylate kinase [Streptococcus pneumoniae GA16833]
gi|418164798|ref|ZP_12801468.1| thymidylate kinase [Streptococcus pneumoniae GA17371]
gi|418171466|ref|ZP_12808090.1| thymidylate kinase [Streptococcus pneumoniae GA19451]
gi|418195967|ref|ZP_12832446.1| thymidylate kinase [Streptococcus pneumoniae GA47688]
gi|418197761|ref|ZP_12834224.1| thymidylate kinase [Streptococcus pneumoniae GA47778]
gi|418223532|ref|ZP_12850172.1| thymidylate kinase [Streptococcus pneumoniae 5185-06]
gi|418227519|ref|ZP_12854138.1| thymidylate kinase [Streptococcus pneumoniae 3063-00]
gi|419424959|ref|ZP_13965158.1| thymidylate kinase [Streptococcus pneumoniae 7533-05]
gi|419427397|ref|ZP_13967580.1| thymidylate kinase [Streptococcus pneumoniae 5652-06]
gi|419429095|ref|ZP_13969262.1| thymidylate kinase [Streptococcus pneumoniae GA11856]
gi|419435801|ref|ZP_13975894.1| thymidylate kinase [Streptococcus pneumoniae 8190-05]
gi|419438034|ref|ZP_13978104.1| thymidylate kinase [Streptococcus pneumoniae GA13499]
gi|419444847|ref|ZP_13984862.1| thymidylate kinase [Streptococcus pneumoniae GA19923]
gi|419446991|ref|ZP_13986996.1| thymidylate kinase [Streptococcus pneumoniae 7879-04]
gi|419448574|ref|ZP_13988571.1| thymidylate kinase [Streptococcus pneumoniae 4075-00]
gi|419451273|ref|ZP_13991259.1| thymidylate kinase [Streptococcus pneumoniae EU-NP02]
gi|419501665|ref|ZP_14041351.1| thymidylate kinase [Streptococcus pneumoniae GA47628]
gi|419518728|ref|ZP_14058335.1| thymidylate kinase [Streptococcus pneumoniae GA08825]
gi|419527671|ref|ZP_14067214.1| thymidylate kinase [Streptococcus pneumoniae GA17719]
gi|421287653|ref|ZP_15738418.1| thymidylate kinase [Streptococcus pneumoniae GA58771]
gi|254808311|sp|C1CRV9.1|KTHY_STRZT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|225727066|gb|ACO22917.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14]
gi|298238648|gb|ADI69779.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A]
gi|327389215|gb|EGE87560.1| thymidylate kinase [Streptococcus pneumoniae GA04375]
gi|353756775|gb|EHD37374.1| thymidylate kinase [Streptococcus pneumoniae GA44288]
gi|353758697|gb|EHD39285.1| thymidylate kinase [Streptococcus pneumoniae GA47281]
gi|353765642|gb|EHD46184.1| thymidylate kinase [Streptococcus pneumoniae GA49138]
gi|353772699|gb|EHD53204.1| thymidylate kinase [Streptococcus pneumoniae 7286-06]
gi|353790726|gb|EHD71107.1| thymidylate kinase [Streptococcus pneumoniae GA18523]
gi|353805774|gb|EHD86048.1| thymidylate kinase [Streptococcus pneumoniae GA13455]
gi|353815910|gb|EHD96122.1| thymidylate kinase [Streptococcus pneumoniae GA14798]
gi|353819313|gb|EHD99511.1| thymidylate kinase [Streptococcus pneumoniae GA16121]
gi|353824047|gb|EHE04221.1| thymidylate kinase [Streptococcus pneumoniae GA16833]
gi|353829659|gb|EHE09790.1| thymidylate kinase [Streptococcus pneumoniae GA17371]
gi|353835203|gb|EHE15297.1| thymidylate kinase [Streptococcus pneumoniae GA19451]
gi|353861418|gb|EHE41355.1| thymidylate kinase [Streptococcus pneumoniae GA47688]
gi|353863917|gb|EHE43836.1| thymidylate kinase [Streptococcus pneumoniae GA47778]
gi|353878330|gb|EHE58160.1| thymidylate kinase [Streptococcus pneumoniae 5185-06]
gi|353883120|gb|EHE62929.1| thymidylate kinase [Streptococcus pneumoniae 3063-00]
gi|379138132|gb|AFC94923.1| thymidylate kinase [Streptococcus pneumoniae ST556]
gi|379538039|gb|EHZ03220.1| thymidylate kinase [Streptococcus pneumoniae GA13499]
gi|379551043|gb|EHZ16138.1| thymidylate kinase [Streptococcus pneumoniae GA11856]
gi|379565824|gb|EHZ30815.1| thymidylate kinase [Streptococcus pneumoniae GA17719]
gi|379572540|gb|EHZ37497.1| thymidylate kinase [Streptococcus pneumoniae GA19923]
gi|379602026|gb|EHZ66798.1| thymidylate kinase [Streptococcus pneumoniae GA47628]
gi|379614531|gb|EHZ79241.1| thymidylate kinase [Streptococcus pneumoniae 7879-04]
gi|379615936|gb|EHZ80637.1| thymidylate kinase [Streptococcus pneumoniae 8190-05]
gi|379618850|gb|EHZ83525.1| thymidylate kinase [Streptococcus pneumoniae 5652-06]
gi|379620288|gb|EHZ84947.1| thymidylate kinase [Streptococcus pneumoniae 7533-05]
gi|379622978|gb|EHZ87612.1| thymidylate kinase [Streptococcus pneumoniae EU-NP02]
gi|379623632|gb|EHZ88265.1| thymidylate kinase [Streptococcus pneumoniae 4075-00]
gi|379641707|gb|EIA06242.1| thymidylate kinase [Streptococcus pneumoniae GA08825]
gi|395888265|gb|EJG99277.1| thymidylate kinase [Streptococcus pneumoniae GA58771]
Length = 212
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKSVLFDGMGLAK 212
>gi|306825448|ref|ZP_07458788.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432386|gb|EFM35362.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 212
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E+V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEEVVEATKAVLFDRMGLAK 212
>gi|168491022|ref|ZP_02715165.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04]
gi|418193562|ref|ZP_12830054.1| thymidylate kinase [Streptococcus pneumoniae GA47439]
gi|183574610|gb|EDT95138.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04]
gi|353859542|gb|EHE39492.1| thymidylate kinase [Streptococcus pneumoniae GA47439]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMDLAK 212
>gi|123967684|ref|YP_001008542.1| thymidylate kinase [Prochlorococcus marinus str. AS9601]
gi|166223102|sp|A2BNS4.1|KTHY_PROMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|123197794|gb|ABM69435.1| Thymidylate kinase [Prochlorococcus marinus str. AS9601]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL--EGL---GHSVELWRFPDRTTSVGQMISAYLSN 108
+G +V+EG+D CGKT+Q L +L GL G + R P + ++ L N
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPNSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61
Query: 109 QSHLDDHTIH--LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW 164
+ ++ LL+SA+R E S ++ L +I DR+S S +A+ + I++E
Sbjct: 62 NKNNKPSSLAELLLYSADRAEHVSKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121
Query: 165 CKAPEIGL---LAPDSVLYLDIPPEKAA-ERGGYGGERYEH--LEFQRKVAQCYQML-RD 217
K E + +PD +L+I PE++ R +R E + F KV + ++++ +
Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFRRKNEIPDRIESEGIRFLEKVNEGFKLIAKQ 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
+WK+I A Q+I+ + Q+KE +L+ + K
Sbjct: 182 KNWKVISASQNIQTISNQIKETLLNNFSNNK 212
>gi|335030196|ref|ZP_08523691.1| dTMP kinase [Streptococcus infantis SK1076]
gi|334266776|gb|EGL85247.1| dTMP kinase [Streptococcus infantis SK1076]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS +L LE V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAILPVLEEKNFGVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+D IE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIDAIE 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI EK ER R E L+ RKV Q Y +L
Sbjct: 119 WLNQYATDGLKPDLTLYFDIDVEKGLERIAANSNREVNRLDLEGLDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA ++ V + K+++ D++
Sbjct: 179 KEGDRIVKIDASLPLDQVVENTKKVLFDRM 208
>gi|334130085|ref|ZP_08503888.1| Thymidylate kinase [Methyloversatilis universalis FAM5]
gi|333445121|gb|EGK73064.1| Thymidylate kinase [Methyloversatilis universalis FAM5]
Length = 205
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ EG+D GK++Q +R +L GH+V L R P T +G+ + L +++ D
Sbjct: 6 FITFEGMDGAGKSTQIARTADWLRARGHAVLLTREPG-GTPLGESLRGLLLHEAMHPDTE 64
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKAPEIGL--- 172
L+F+A R ++E L G ++ DR++ + A+ +G+DI +A E +
Sbjct: 65 ALLMFAARREHLAQVIEPALGRGDWVLCDRFTDASFAYQGGGRGLDIARLQALEAWVQRG 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGG---ERY--EHLEFQRKVAQCY---QMLRDSSWKIID 224
L P L D+P E AA+R G +R+ E +F +V Y ++++
Sbjct: 125 LQPGLTLLFDLPCEVAAQRLAASGGDPDRFEREQSDFFNRVRAAYLARAQADPGRMQVLN 184
Query: 225 ACQSIEDVEKQLKEIV 240
A +S E+V QL+EI+
Sbjct: 185 AARSPEEVSAQLEEIL 200
>gi|419470889|ref|ZP_14010748.1| thymidylate kinase [Streptococcus pneumoniae GA07914]
gi|379545605|gb|EHZ10744.1| thymidylate kinase [Streptococcus pneumoniae GA07914]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KGGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
>gi|260905520|ref|ZP_05913842.1| thymidylate kinase [Brevibacterium linens BL2]
Length = 904
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 37 PFRMESSSSLRIGNIDSR---GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPD 93
P E+ ++ IGN R G + +EG D GK++Q R+ L G+SVE R P
Sbjct: 391 PSAAENGANDSIGNSAERLGAGFFIAIEGGDGSGKSTQIKRVSQILADEGYSVEATREPG 450
Query: 94 RTTSVGQMISAYLSNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGV 152
T +G+ I + L + T LLF+A+R S+++ L +G +I DRY S +
Sbjct: 451 -GTELGRQIRSVLFDSEPPSPRTEALLFAADRAHHVASLVDPSLDSGNIVITDRYIDSTI 509
Query: 153 AFSSA-KGID----IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER----YEHLE 203
A+ +A + D + K GL+ P + LDI PE +A R G GE E+ +
Sbjct: 510 AYQAAGRNFDPKTILALSKWATQGLV-PHLTIVLDIDPEVSATRMGKRGENNYLDEENQQ 568
Query: 204 FQRKVAQCY---QMLRDSSWKIIDACQSIEDVEKQL 236
F ++V Q Y + ++DA S ED+ ++
Sbjct: 569 FHQRVRQTYLTRAHKEPDRYIVLDASVSEEDLTAEI 604
>gi|325958282|ref|YP_004289748.1| thymidylate kinase [Methanobacterium sp. AL-21]
gi|325329714|gb|ADZ08776.1| Thymidylate kinase [Methanobacterium sp. AL-21]
Length = 191
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH-- 115
+ LEG+D GKT+Q L S+++ G V L F VG++I L N ++++
Sbjct: 3 ICLEGIDGSGKTTQIKLLESWIQKCGIDV-LRVFEPTDNEVGKLIRKLLQNPDAINENFQ 61
Query: 116 -TIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
T+ LLF+A+R R + EA+ A +I DR YS + + + D EW
Sbjct: 62 ITLALLFAADRTVLMRDITEAEALA-KIVISDRSFYSSMVYQN----DSEWIAEINKHAK 116
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD-SSWKIIDACQSIEDV 232
PD V+ LDI PE A R G + +E F A+ Y L D ++ +++A I V
Sbjct: 117 QPDLVILLDINPETAVSRCD-GMDSFEEQNFLASTAKKYLELADHQNFMVVNANNGINKV 175
Query: 233 EKQLKEIVLDQVTAC 247
+K IV ++ C
Sbjct: 176 HDDIKRIVAHKLGMC 190
>gi|15900815|ref|NP_345419.1| thymidylate kinase [Streptococcus pneumoniae TIGR4]
gi|111658126|ref|ZP_01408824.1| hypothetical protein SpneT_02000692 [Streptococcus pneumoniae
TIGR4]
gi|148984675|ref|ZP_01817943.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71]
gi|148988371|ref|ZP_01819818.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73]
gi|148996974|ref|ZP_01824628.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70]
gi|149002482|ref|ZP_01827416.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69]
gi|149006392|ref|ZP_01830104.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74]
gi|149019523|ref|ZP_01834842.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72]
gi|168575597|ref|ZP_02721533.1| thymidylate kinase [Streptococcus pneumoniae MLV-016]
gi|194397492|ref|YP_002037572.1| thymidylate kinase [Streptococcus pneumoniae G54]
gi|225854440|ref|YP_002735952.1| thymidylate kinase [Streptococcus pneumoniae JJA]
gi|225858732|ref|YP_002740242.1| thymidylate kinase [Streptococcus pneumoniae 70585]
gi|237651112|ref|ZP_04525364.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974]
gi|237821889|ref|ZP_04597734.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974M2]
gi|307067591|ref|YP_003876557.1| thymidylate kinase [Streptococcus pneumoniae AP200]
gi|307127513|ref|YP_003879544.1| thymidylate kinase [Streptococcus pneumoniae 670-6B]
gi|342163972|ref|YP_004768611.1| thymidylate kinase [Streptococcus pseudopneumoniae IS7493]
gi|383937971|ref|ZP_09991200.1| dTMP kinase [Streptococcus pseudopneumoniae SK674]
gi|387757328|ref|YP_006064307.1| thymidylate kinase [Streptococcus pneumoniae OXC141]
gi|417676687|ref|ZP_12326098.1| thymidylate kinase [Streptococcus pneumoniae GA17545]
gi|417686376|ref|ZP_12335654.1| thymidylate kinase [Streptococcus pneumoniae GA41301]
gi|417698348|ref|ZP_12347521.1| thymidylate kinase [Streptococcus pneumoniae GA41317]
gi|418076037|ref|ZP_12713276.1| thymidylate kinase [Streptococcus pneumoniae GA47502]
gi|418096041|ref|ZP_12733156.1| thymidylate kinase [Streptococcus pneumoniae GA16531]
gi|418102655|ref|ZP_12739731.1| thymidylate kinase [Streptococcus pneumoniae NP070]
gi|418112286|ref|ZP_12749288.1| thymidylate kinase [Streptococcus pneumoniae GA41538]
gi|418121005|ref|ZP_12757951.1| thymidylate kinase [Streptococcus pneumoniae GA44194]
gi|418130099|ref|ZP_12766983.1| thymidylate kinase [Streptococcus pneumoniae GA07643]
gi|418132776|ref|ZP_12769649.1| thymidylate kinase [Streptococcus pneumoniae GA11304]
gi|418143744|ref|ZP_12780544.1| thymidylate kinase [Streptococcus pneumoniae GA13494]
gi|418148360|ref|ZP_12785125.1| thymidylate kinase [Streptococcus pneumoniae GA13856]
gi|418154967|ref|ZP_12791698.1| thymidylate kinase [Streptococcus pneumoniae GA16242]
gi|418159609|ref|ZP_12796308.1| thymidylate kinase [Streptococcus pneumoniae GA17227]
gi|418166553|ref|ZP_12803209.1| thymidylate kinase [Streptococcus pneumoniae GA17971]
gi|418186946|ref|ZP_12823475.1| thymidylate kinase [Streptococcus pneumoniae GA47360]
gi|418225357|ref|ZP_12851986.1| thymidylate kinase [Streptococcus pneumoniae NP112]
gi|418229680|ref|ZP_12856286.1| thymidylate kinase [Streptococcus pneumoniae EU-NP01]
gi|418232000|ref|ZP_12858588.1| thymidylate kinase [Streptococcus pneumoniae GA07228]
gi|418236441|ref|ZP_12863009.1| thymidylate kinase [Streptococcus pneumoniae GA19690]
gi|418973088|ref|ZP_13521124.1| dTMP kinase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|419453215|ref|ZP_13993188.1| thymidylate kinase [Streptococcus pneumoniae EU-NP03]
gi|419457312|ref|ZP_13997257.1| thymidylate kinase [Streptococcus pneumoniae GA02254]
gi|419466378|ref|ZP_14006261.1| thymidylate kinase [Streptococcus pneumoniae GA05248]
gi|419475327|ref|ZP_14015168.1| thymidylate kinase [Streptococcus pneumoniae GA14688]
gi|419477599|ref|ZP_14017424.1| thymidylate kinase [Streptococcus pneumoniae GA18068]
gi|419479763|ref|ZP_14019570.1| thymidylate kinase [Streptococcus pneumoniae GA19101]
gi|419486483|ref|ZP_14026249.1| thymidylate kinase [Streptococcus pneumoniae GA44128]
gi|419490853|ref|ZP_14030593.1| thymidylate kinase [Streptococcus pneumoniae GA47179]
gi|419499454|ref|ZP_14039153.1| thymidylate kinase [Streptococcus pneumoniae GA47597]
gi|419503747|ref|ZP_14043416.1| thymidylate kinase [Streptococcus pneumoniae GA47760]
gi|419505868|ref|ZP_14045529.1| thymidylate kinase [Streptococcus pneumoniae GA49194]
gi|419512331|ref|ZP_14051965.1| thymidylate kinase [Streptococcus pneumoniae GA05578]
gi|419516609|ref|ZP_14056227.1| thymidylate kinase [Streptococcus pneumoniae GA02506]
gi|419520869|ref|ZP_14060465.1| thymidylate kinase [Streptococcus pneumoniae GA05245]
gi|419532164|ref|ZP_14071681.1| thymidylate kinase [Streptococcus pneumoniae GA47794]
gi|421208756|ref|ZP_15665778.1| thymidylate kinase [Streptococcus pneumoniae 2070005]
gi|421211035|ref|ZP_15668019.1| thymidylate kinase [Streptococcus pneumoniae 2070035]
gi|421224800|ref|ZP_15681544.1| thymidylate kinase [Streptococcus pneumoniae 2070768]
gi|421227092|ref|ZP_15683801.1| thymidylate kinase [Streptococcus pneumoniae 2072047]
gi|421231703|ref|ZP_15688348.1| thymidylate kinase [Streptococcus pneumoniae 2080076]
gi|421233918|ref|ZP_15690540.1| thymidylate kinase [Streptococcus pneumoniae 2061617]
gi|421236078|ref|ZP_15692679.1| thymidylate kinase [Streptococcus pneumoniae 2071004]
gi|421238565|ref|ZP_15695134.1| thymidylate kinase [Streptococcus pneumoniae 2071247]
gi|421240493|ref|ZP_15697040.1| thymidylate kinase [Streptococcus pneumoniae 2080913]
gi|421242884|ref|ZP_15699405.1| thymidylate kinase [Streptococcus pneumoniae 2081074]
gi|421244756|ref|ZP_15701258.1| thymidylate kinase [Streptococcus pneumoniae 2081685]
gi|421247194|ref|ZP_15703681.1| thymidylate kinase [Streptococcus pneumoniae 2082170]
gi|421249227|ref|ZP_15705689.1| thymidylate kinase [Streptococcus pneumoniae 2082239]
gi|421270604|ref|ZP_15721460.1| thymidylate kinase [Streptococcus pneumoniae SPAR48]
gi|421274836|ref|ZP_15725668.1| thymidylate kinase [Streptococcus pneumoniae GA52612]
gi|421283124|ref|ZP_15733911.1| thymidylate kinase [Streptococcus pneumoniae GA04216]
gi|421314101|ref|ZP_15764691.1| thymidylate kinase [Streptococcus pneumoniae GA47562]
gi|23821803|sp|Q97R91.1|KTHY_STRPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|238690815|sp|B5E437.1|KTHY_STRP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|254808306|sp|C1C6R6.1|KTHY_STRP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|254808309|sp|C1CDT1.1|KTHY_STRZJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|14972410|gb|AAK75059.1| thymidylate kinase [Streptococcus pneumoniae TIGR4]
gi|147756674|gb|EDK63714.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70]
gi|147759419|gb|EDK66411.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69]
gi|147762169|gb|EDK69131.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74]
gi|147923066|gb|EDK74181.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71]
gi|147926052|gb|EDK77126.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73]
gi|147930898|gb|EDK81878.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72]
gi|183578645|gb|EDT99173.1| thymidylate kinase [Streptococcus pneumoniae MLV-016]
gi|194357159|gb|ACF55607.1| thymidylate kinase [Streptococcus pneumoniae G54]
gi|225720178|gb|ACO16032.1| thymidylate kinase [Streptococcus pneumoniae 70585]
gi|225723023|gb|ACO18876.1| thymidylate kinase [Streptococcus pneumoniae JJA]
gi|301799917|emb|CBW32496.1| thymidylate kinase [Streptococcus pneumoniae OXC141]
gi|306409128|gb|ADM84555.1| Thymidylate kinase [Streptococcus pneumoniae AP200]
gi|306484575|gb|ADM91444.1| thymidylate kinase [Streptococcus pneumoniae 670-6B]
gi|332075547|gb|EGI86015.1| thymidylate kinase [Streptococcus pneumoniae GA17545]
gi|332076213|gb|EGI86679.1| thymidylate kinase [Streptococcus pneumoniae GA41301]
gi|332202789|gb|EGJ16858.1| thymidylate kinase [Streptococcus pneumoniae GA41317]
gi|341933854|gb|AEL10751.1| thymidylate kinase [Streptococcus pseudopneumoniae IS7493]
gi|353749826|gb|EHD30469.1| thymidylate kinase [Streptococcus pneumoniae GA47502]
gi|353771028|gb|EHD51539.1| thymidylate kinase [Streptococcus pneumoniae GA16531]
gi|353776821|gb|EHD57296.1| thymidylate kinase [Streptococcus pneumoniae NP070]
gi|353784152|gb|EHD64573.1| thymidylate kinase [Streptococcus pneumoniae GA41538]
gi|353793832|gb|EHD74191.1| thymidylate kinase [Streptococcus pneumoniae GA44194]
gi|353803391|gb|EHD83683.1| thymidylate kinase [Streptococcus pneumoniae GA07643]
gi|353806732|gb|EHD87005.1| thymidylate kinase [Streptococcus pneumoniae GA11304]
gi|353809485|gb|EHD89745.1| thymidylate kinase [Streptococcus pneumoniae GA13494]
gi|353813035|gb|EHD93268.1| thymidylate kinase [Streptococcus pneumoniae GA13856]
gi|353821342|gb|EHE01518.1| thymidylate kinase [Streptococcus pneumoniae GA17227]
gi|353823259|gb|EHE03434.1| thymidylate kinase [Streptococcus pneumoniae GA16242]
gi|353830149|gb|EHE10279.1| thymidylate kinase [Streptococcus pneumoniae GA17971]
gi|353852771|gb|EHE32757.1| thymidylate kinase [Streptococcus pneumoniae GA47360]
gi|353882665|gb|EHE62476.1| thymidylate kinase [Streptococcus pneumoniae NP112]
gi|353888306|gb|EHE68082.1| thymidylate kinase [Streptococcus pneumoniae GA07228]
gi|353889586|gb|EHE69356.1| thymidylate kinase [Streptococcus pneumoniae EU-NP01]
gi|353892673|gb|EHE72421.1| thymidylate kinase [Streptococcus pneumoniae GA19690]
gi|379532310|gb|EHY97539.1| thymidylate kinase [Streptococcus pneumoniae GA02254]
gi|379539883|gb|EHZ05060.1| thymidylate kinase [Streptococcus pneumoniae GA05245]
gi|379544501|gb|EHZ09645.1| thymidylate kinase [Streptococcus pneumoniae GA05248]
gi|379561665|gb|EHZ26682.1| thymidylate kinase [Streptococcus pneumoniae GA14688]
gi|379566981|gb|EHZ31968.1| thymidylate kinase [Streptococcus pneumoniae GA18068]
gi|379570929|gb|EHZ35888.1| thymidylate kinase [Streptococcus pneumoniae GA19101]
gi|379588098|gb|EHZ52944.1| thymidylate kinase [Streptococcus pneumoniae GA44128]
gi|379594432|gb|EHZ59242.1| thymidylate kinase [Streptococcus pneumoniae GA47179]
gi|379602508|gb|EHZ67279.1| thymidylate kinase [Streptococcus pneumoniae GA47597]
gi|379606334|gb|EHZ71082.1| thymidylate kinase [Streptococcus pneumoniae GA47794]
gi|379606424|gb|EHZ71171.1| thymidylate kinase [Streptococcus pneumoniae GA47760]
gi|379607782|gb|EHZ72528.1| thymidylate kinase [Streptococcus pneumoniae GA49194]
gi|379626924|gb|EHZ91540.1| thymidylate kinase [Streptococcus pneumoniae EU-NP03]
gi|379636801|gb|EIA01359.1| thymidylate kinase [Streptococcus pneumoniae GA05578]
gi|379640612|gb|EIA05151.1| thymidylate kinase [Streptococcus pneumoniae GA02506]
gi|383350348|gb|EID28221.1| dTMP kinase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383715099|gb|EID71076.1| dTMP kinase [Streptococcus pseudopneumoniae SK674]
gi|395573758|gb|EJG34345.1| thymidylate kinase [Streptococcus pneumoniae 2070035]
gi|395575712|gb|EJG36277.1| thymidylate kinase [Streptococcus pneumoniae 2070005]
gi|395590588|gb|EJG50892.1| thymidylate kinase [Streptococcus pneumoniae 2070768]
gi|395596193|gb|EJG56415.1| thymidylate kinase [Streptococcus pneumoniae 2080076]
gi|395596331|gb|EJG56550.1| thymidylate kinase [Streptococcus pneumoniae 2072047]
gi|395602815|gb|EJG62957.1| thymidylate kinase [Streptococcus pneumoniae 2061617]
gi|395603152|gb|EJG63293.1| thymidylate kinase [Streptococcus pneumoniae 2071247]
gi|395604997|gb|EJG65129.1| thymidylate kinase [Streptococcus pneumoniae 2071004]
gi|395609075|gb|EJG69165.1| thymidylate kinase [Streptococcus pneumoniae 2080913]
gi|395609583|gb|EJG69669.1| thymidylate kinase [Streptococcus pneumoniae 2081074]
gi|395609933|gb|EJG70017.1| thymidylate kinase [Streptococcus pneumoniae 2081685]
gi|395614528|gb|EJG74547.1| thymidylate kinase [Streptococcus pneumoniae 2082239]
gi|395614830|gb|EJG74848.1| thymidylate kinase [Streptococcus pneumoniae 2082170]
gi|395868399|gb|EJG79517.1| thymidylate kinase [Streptococcus pneumoniae SPAR48]
gi|395875564|gb|EJG86645.1| thymidylate kinase [Streptococcus pneumoniae GA52612]
gi|395881087|gb|EJG92136.1| thymidylate kinase [Streptococcus pneumoniae GA04216]
gi|395914601|gb|EJH25445.1| thymidylate kinase [Streptococcus pneumoniae GA47562]
gi|429317754|emb|CCP37554.1| thymidylate kinase [Streptococcus pneumoniae SPN034156]
gi|429319297|emb|CCP32547.1| thymidylate kinase [Streptococcus pneumoniae SPN034183]
gi|429321112|emb|CCP34521.1| thymidylate kinase [Streptococcus pneumoniae SPN994039]
gi|429322932|emb|CCP30562.1| thymidylate kinase [Streptococcus pneumoniae SPN994038]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
>gi|425736497|ref|ZP_18854801.1| thymidylate kinase [Brevibacterium casei S18]
gi|425478167|gb|EKU45368.1| thymidylate kinase [Brevibacterium casei S18]
Length = 928
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + +EG D GK++Q +R+ L G+SVE R P T +G+ I + L +
Sbjct: 425 GFFIAIEGGDGSGKSTQIARISRALADEGYSVESTREPG-GTELGRQIRSVLFDSDPPSP 483
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID----IEWCKAP 168
T LLF+A+R S+++ L+AG+ +I DRY S VA+ +A + D + +
Sbjct: 484 RTEALLFAADRAHHVASLVDPGLEAGSIVITDRYIDSTVAYQAAGREFDPTTILALSRWA 543
Query: 169 EIGLLAPDSVLYLDIPPEKAAER-GGYGGERY---EHLEFQRKVAQCY--QMLRD-SSWK 221
GL+ P + LDI PE AAER GG Y E +F ++V Q Y + +D +
Sbjct: 544 TEGLI-PHLTIVLDIDPEVAAERMSARGGANYLDEESQQFHQRVRQTYLSRAQKDPERYV 602
Query: 222 IIDACQSIEDVEKQLKEIV 240
++DA + +++ Q+ E V
Sbjct: 603 VLDASVTADELTGQILEAV 621
>gi|225856597|ref|YP_002738108.1| thymidylate kinase [Streptococcus pneumoniae P1031]
gi|387626294|ref|YP_006062467.1| thymidylate kinase [Streptococcus pneumoniae INV104]
gi|410476377|ref|YP_006743136.1| dTMPkinase [Streptococcus pneumoniae gamPNI0373]
gi|417693852|ref|ZP_12343041.1| thymidylate kinase [Streptococcus pneumoniae GA47901]
gi|419442420|ref|ZP_13982451.1| thymidylate kinase [Streptococcus pneumoniae GA13224]
gi|421268135|ref|ZP_15719007.1| thymidylate kinase [Streptococcus pneumoniae SPAR95]
gi|444382201|ref|ZP_21180405.1| dTMP kinase [Streptococcus pneumoniae PCS8106]
gi|444384771|ref|ZP_21182862.1| dTMP kinase [Streptococcus pneumoniae PCS8203]
gi|444388740|ref|ZP_21186714.1| dTMP kinase [Streptococcus pneumoniae PCS125219]
gi|444389934|ref|ZP_21187849.1| dTMP kinase [Streptococcus pneumoniae PCS70012]
gi|444393502|ref|ZP_21191147.1| dTMP kinase [Streptococcus pneumoniae PCS81218]
gi|444395831|ref|ZP_21193370.1| dTMP kinase [Streptococcus pneumoniae PNI0002]
gi|444397391|ref|ZP_21194874.1| dTMP kinase [Streptococcus pneumoniae PNI0006]
gi|444399118|ref|ZP_21196590.1| dTMP kinase [Streptococcus pneumoniae PNI0007]
gi|444403702|ref|ZP_21200764.1| dTMP kinase [Streptococcus pneumoniae PNI0008]
gi|444406260|ref|ZP_21203039.1| dTMP kinase [Streptococcus pneumoniae PNI0009]
gi|444408607|ref|ZP_21205240.1| dTMP kinase [Streptococcus pneumoniae PNI0010]
gi|444409597|ref|ZP_21206185.1| dTMP kinase [Streptococcus pneumoniae PNI0076]
gi|444411713|ref|ZP_21208041.1| dTMP kinase [Streptococcus pneumoniae PNI0153]
gi|444415863|ref|ZP_21212084.1| dTMP kinase [Streptococcus pneumoniae PNI0199]
gi|444418519|ref|ZP_21214495.1| dTMP kinase [Streptococcus pneumoniae PNI0360]
gi|444421499|ref|ZP_21217215.1| dTMP kinase [Streptococcus pneumoniae PNI0427]
gi|444422559|ref|ZP_21218210.1| dTMP kinase [Streptococcus pneumoniae PNI0446]
gi|254808310|sp|C1CK20.1|KTHY_STRZP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|225725389|gb|ACO21241.1| thymidylate kinase [Streptococcus pneumoniae P1031]
gi|301794077|emb|CBW36481.1| thymidylate kinase [Streptococcus pneumoniae INV104]
gi|332204935|gb|EGJ19000.1| thymidylate kinase [Streptococcus pneumoniae GA47901]
gi|379554387|gb|EHZ19467.1| thymidylate kinase [Streptococcus pneumoniae GA13224]
gi|395871559|gb|EJG82665.1| thymidylate kinase [Streptococcus pneumoniae SPAR95]
gi|406369322|gb|AFS43012.1| dTMPkinase [Streptococcus pneumoniae gamPNI0373]
gi|444248386|gb|ELU54895.1| dTMP kinase [Streptococcus pneumoniae PCS125219]
gi|444251531|gb|ELU58000.1| dTMP kinase [Streptococcus pneumoniae PCS8203]
gi|444253161|gb|ELU59620.1| dTMP kinase [Streptococcus pneumoniae PCS8106]
gi|444255832|gb|ELU62172.1| dTMP kinase [Streptococcus pneumoniae PNI0002]
gi|444256397|gb|ELU62735.1| dTMP kinase [Streptococcus pneumoniae PCS70012]
gi|444259278|gb|ELU65593.1| dTMP kinase [Streptococcus pneumoniae PCS81218]
gi|444260048|gb|ELU66356.1| dTMP kinase [Streptococcus pneumoniae PNI0006]
gi|444263494|gb|ELU69657.1| dTMP kinase [Streptococcus pneumoniae PNI0008]
gi|444268977|gb|ELU74794.1| dTMP kinase [Streptococcus pneumoniae PNI0009]
gi|444269304|gb|ELU75115.1| dTMP kinase [Streptococcus pneumoniae PNI0007]
gi|444269434|gb|ELU75241.1| dTMP kinase [Streptococcus pneumoniae PNI0010]
gi|444275610|gb|ELU81232.1| dTMP kinase [Streptococcus pneumoniae PNI0153]
gi|444278850|gb|ELU84274.1| dTMP kinase [Streptococcus pneumoniae PNI0199]
gi|444279131|gb|ELU84541.1| dTMP kinase [Streptococcus pneumoniae PNI0076]
gi|444281309|gb|ELU86633.1| dTMP kinase [Streptococcus pneumoniae PNI0360]
gi|444282018|gb|ELU87303.1| dTMP kinase [Streptococcus pneumoniae PNI0427]
gi|444288065|gb|ELU92967.1| dTMP kinase [Streptococcus pneumoniae PNI0446]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
>gi|254386206|ref|ZP_05001517.1| thymidylate kinase [Streptomyces sp. Mg1]
gi|194345062|gb|EDX26028.1| thymidylate kinase [Streptomyces sp. Mg1]
Length = 852
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 37 PFRMESSSSLRIGN----IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP 92
P R + +LR G G + LEG D GK++Q L ++ G GH V + R P
Sbjct: 495 PLRRDLREALRGGEPVQAASDAGFFIALEGGDGAGKSTQVQALADWIRGKGHEVVVTREP 554
Query: 93 DRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSY 149
T VG+ + + L + S L + LL++A+R E +++ L+ G +I DRY
Sbjct: 555 G-ATPVGKRLRSILLDVSSAGLSNRAEALLYAADRAEHVDTVVRPALERGAVVITDRYID 613
Query: 150 SGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH--L 202
S VA+ A G D+ + I G L P+ + LD+ PE A ER +R E
Sbjct: 614 SSVAYQGA-GRDLSPTEIARISRWATGGLVPNLTVLLDVSPEAARERFTEAPDRLESEPA 672
Query: 203 EFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
EF ++V + L + + ++DA Q E V
Sbjct: 673 EFHQRVRAGFLTLAAADPGRYLVVDAGQDPESV 705
>gi|254479299|ref|ZP_05092640.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
gi|214034774|gb|EEB75507.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
Length = 208
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + EG+D CGKT+Q L +L+ G+ + + R P T VG+ + L ++ +L
Sbjct: 2 RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPG-GTRVGEKVREILLDRENLI 60
Query: 114 -DHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K L G +IVDR+ S + A+G+ +E K
Sbjct: 61 FPVTEMLLYASSRAQ---LVEEKILPALSKGQMVIVDRFVDSSYVYQGYARGLGLEKVKI 117
Query: 167 APEIGL--LAPDSVLYLDIPPEKAAE-RGGYGGERY--EHLEFQRKVAQCY-QMLRD--S 218
EI L PD +Y+DI PE+A + R G +R E EF +KV + Y ++++D
Sbjct: 118 VNEIATKGLFPDITVYIDITPEEAIKRRQGKKADRLEGEDYEFHKKVREGYLRLVKDFPE 177
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
+ +ID Q + V K + + V + + K
Sbjct: 178 RFVLIDGMQEVLAVHKMVVKAVEEYLKGAK 207
>gi|421277494|ref|ZP_15728313.1| thymidylate kinase [Streptococcus mitis SPAR10]
gi|395874746|gb|EJG85828.1| thymidylate kinase [Streptococcus mitis SPAR10]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS +L LE R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY D+ EK ER +R E L+ RKV Q Y +L+
Sbjct: 119 WLNQFATDGLKPDLTLYFDVEVEKGLERIAANSDREVNRLDLEGLDLHRKVRQGYLSLLK 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA ++ V + K+++ D++
Sbjct: 179 KDGERIAKIDASLPLDQVVENTKQVLFDRM 208
>gi|385804618|ref|YP_005841018.1| thymidylate kinase [Haloquadratum walsbyi C23]
gi|339730110|emb|CCC41428.1| thymidylate kinase [Haloquadratum walsbyi C23]
Length = 213
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTS-VGQMISAYLSNQSHLDDH 115
L+ LEGLD GK++ C L S L V R P T S G +++ + + S D
Sbjct: 14 LITLEGLDGSGKSTVCESLQSALP----EVTFTREP--TDSWYGDLVTESMHDDS-ADSL 66
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID------IEWCKA- 167
LF+A+ ++ L +GT +I DRY+ S A+ +A D +E+ ++
Sbjct: 67 AELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLEYIQSI 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIID 224
E PD+ +YLDI PE R G ++E +++ +VA Y+ L + + +D
Sbjct: 127 HEPFSRRPDATVYLDIDPETGVNRAG-ATNKFERVQYLERVATQYERLITAEPTRFYRVD 185
Query: 225 ACQSIEDVEKQLKEIV 240
A QSI DV+K++K IV
Sbjct: 186 ASQSIADVKKRVKTIV 201
>gi|297569137|ref|YP_003690481.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
gi|296925052|gb|ADH85862.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
Length = 222
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ LEG+D GK++Q L L LG V + R P ++ +L+ S +
Sbjct: 14 GVLIALEGIDGTGKSTQQQLLAQRLRQLGLEVVVTREPTDGPYGRRLRELFLNRASLSPE 73
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID------IEWCKAP 168
+ L + R ++E LKAG +I DRY YS A+ A G D I AP
Sbjct: 74 EELQLFLADRREHVAKLIEPALKAGRVVITDRYYYSTAAYQGASGHDPAAILAINESFAP 133
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYG-GER---YEHLEFQRKVAQCYQMLRDSSWKIID 224
PD VL L+ PP R G GE +E ++ R+VA + ++
Sbjct: 134 R-----PDLVLLLEAPPAVGVRRVQEGRGESLNDFEQEDYLRRVAGIFAGFSAPGLVRVN 188
Query: 225 ACQSIEDVEKQL 236
A +IE V+ ++
Sbjct: 189 ATGAIEQVQVEI 200
>gi|306829296|ref|ZP_07462486.1| thymidylate kinase [Streptococcus mitis ATCC 6249]
gi|304428382|gb|EFM31472.1| thymidylate kinase [Streptococcus mitis ATCC 6249]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRMVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|419783262|ref|ZP_14309053.1| dTMP kinase [Streptococcus oralis SK610]
gi|383182416|gb|EIC74971.1| dTMP kinase [Streptococcus oralis SK610]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|163782656|ref|ZP_02177653.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882229|gb|EDP75736.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
Length = 200
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GKT+Q +L +L G V L+R P T +G+ + L N+ L++ T
Sbjct: 2 LITFEGIDGSGKTTQSKKLYEFLREKGLDVSLYREPG-GTPLGEELRDILINK-ELNERT 59
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA----PEI 170
LLF R + ++ ++ G +I+DR++ S +A+ +G+D+E+ K
Sbjct: 60 ELLLFEGARTQLVLERLKPDMERGMVVILDRFTDSTLAYQGYGRGLDLEFVKKLNEFASF 119
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKII--DACQ 227
G + PD LDI PE A R R+++++F +KV + + ++ R S +++ D +
Sbjct: 120 G-IKPDITFLLDIEPETAVGRIREKS-RFDNVDFLKKVREGFLEIARKESERVVVLDTHR 177
Query: 228 SIEDVEKQLKEIV 240
E+V +KE +
Sbjct: 178 GEEEVFGDIKETL 190
>gi|406576389|ref|ZP_11052018.1| thymidylate kinase [Streptococcus sp. GMD6S]
gi|404461396|gb|EKA07327.1| thymidylate kinase [Streptococcus sp. GMD6S]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDMEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|417794287|ref|ZP_12441545.1| dTMP kinase [Streptococcus oralis SK255]
gi|334270131|gb|EGL88538.1| dTMP kinase [Streptococcus oralis SK255]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E+V + K ++ +++ K
Sbjct: 179 KEGSRIAKIDASLPLEEVVEATKTVLFERMGLAK 212
>gi|322392107|ref|ZP_08065569.1| thymidylate kinase [Streptococcus peroris ATCC 700780]
gi|321145007|gb|EFX40406.1| thymidylate kinase [Streptococcus peroris ATCC 700780]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV +EG + GKTS +L LE V R P +G+ I + + SH
Sbjct: 2 SKGFLVSIEGPEGAGKTSVLEAILPVLEEKNIEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI EK ER R E L+ RKV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEKGLERIAANSNREVNRLDLEGLDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA ++ V + K+++ D++
Sbjct: 179 KEGERIVKIDASLPLDQVVENTKQVLFDRM 208
>gi|187931061|ref|YP_001891045.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|238691529|sp|B2SF22.1|KTHY_FRATM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|187711970|gb|ACD30267.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 209
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ S + YLE + R P T ++ + L N+ + H+
Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64
Query: 117 ---IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL 172
+ ++++ R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124
Query: 173 L---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWKI-I 223
L PD V+YLDI P +R G +R E LEF K + ++ +++DS I I
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNKTRKVFKDLVKDSDNAIEI 184
Query: 224 DACQSIEDVEKQLKEIVLDQ 243
DA +SI++VEKQ+ ++LD+
Sbjct: 185 DAAKSIQEVEKQIY-LILDK 203
>gi|148992933|ref|ZP_01822552.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68]
gi|168483004|ref|ZP_02707956.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00]
gi|168490250|ref|ZP_02714449.1| thymidylate kinase [Streptococcus pneumoniae SP195]
gi|417678887|ref|ZP_12328284.1| thymidylate kinase [Streptococcus pneumoniae GA17570]
gi|417696124|ref|ZP_12345303.1| thymidylate kinase [Streptococcus pneumoniae GA47368]
gi|418091679|ref|ZP_12728821.1| thymidylate kinase [Streptococcus pneumoniae GA44452]
gi|418107324|ref|ZP_12744362.1| thymidylate kinase [Streptococcus pneumoniae GA41410]
gi|418109900|ref|ZP_12746925.1| thymidylate kinase [Streptococcus pneumoniae GA49447]
gi|418125542|ref|ZP_12762453.1| thymidylate kinase [Streptococcus pneumoniae GA44511]
gi|418161986|ref|ZP_12798673.1| thymidylate kinase [Streptococcus pneumoniae GA17328]
gi|418169036|ref|ZP_12805680.1| thymidylate kinase [Streptococcus pneumoniae GA19077]
gi|418175750|ref|ZP_12812347.1| thymidylate kinase [Streptococcus pneumoniae GA41437]
gi|418191479|ref|ZP_12827983.1| thymidylate kinase [Streptococcus pneumoniae GA47388]
gi|418214106|ref|ZP_12840841.1| thymidylate kinase [Streptococcus pneumoniae GA54644]
gi|418218678|ref|ZP_12845345.1| thymidylate kinase [Streptococcus pneumoniae NP127]
gi|418220987|ref|ZP_12847641.1| thymidylate kinase [Streptococcus pneumoniae GA47751]
gi|418234132|ref|ZP_12860711.1| thymidylate kinase [Streptococcus pneumoniae GA08780]
gi|418238511|ref|ZP_12865066.1| thymidylate kinase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419422773|ref|ZP_13962989.1| thymidylate kinase [Streptococcus pneumoniae GA43264]
gi|419459778|ref|ZP_13999711.1| thymidylate kinase [Streptococcus pneumoniae GA02270]
gi|419462096|ref|ZP_14002006.1| thymidylate kinase [Streptococcus pneumoniae GA02714]
gi|419484202|ref|ZP_14023978.1| thymidylate kinase [Streptococcus pneumoniae GA43257]
gi|419488821|ref|ZP_14028571.1| thymidylate kinase [Streptococcus pneumoniae GA44386]
gi|419508005|ref|ZP_14047658.1| thymidylate kinase [Streptococcus pneumoniae GA49542]
gi|419525684|ref|ZP_14065248.1| thymidylate kinase [Streptococcus pneumoniae GA14373]
gi|421220084|ref|ZP_15676934.1| thymidylate kinase [Streptococcus pneumoniae 2070425]
gi|421222411|ref|ZP_15679202.1| thymidylate kinase [Streptococcus pneumoniae 2070531]
gi|421272588|ref|ZP_15723432.1| thymidylate kinase [Streptococcus pneumoniae SPAR55]
gi|421278709|ref|ZP_15729517.1| thymidylate kinase [Streptococcus pneumoniae GA17301]
gi|421293947|ref|ZP_15744670.1| thymidylate kinase [Streptococcus pneumoniae GA56113]
gi|421300783|ref|ZP_15751454.1| thymidylate kinase [Streptococcus pneumoniae GA19998]
gi|147928385|gb|EDK79401.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68]
gi|172043528|gb|EDT51574.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00]
gi|183571397|gb|EDT91925.1| thymidylate kinase [Streptococcus pneumoniae SP195]
gi|332073266|gb|EGI83745.1| thymidylate kinase [Streptococcus pneumoniae GA17570]
gi|332201399|gb|EGJ15469.1| thymidylate kinase [Streptococcus pneumoniae GA47368]
gi|353763779|gb|EHD44329.1| thymidylate kinase [Streptococcus pneumoniae GA44452]
gi|353779507|gb|EHD59971.1| thymidylate kinase [Streptococcus pneumoniae GA41410]
gi|353782812|gb|EHD63242.1| thymidylate kinase [Streptococcus pneumoniae GA49447]
gi|353797796|gb|EHD78127.1| thymidylate kinase [Streptococcus pneumoniae GA44511]
gi|353828369|gb|EHE08509.1| thymidylate kinase [Streptococcus pneumoniae GA17328]
gi|353834878|gb|EHE14974.1| thymidylate kinase [Streptococcus pneumoniae GA19077]
gi|353842318|gb|EHE22365.1| thymidylate kinase [Streptococcus pneumoniae GA41437]
gi|353857380|gb|EHE37343.1| thymidylate kinase [Streptococcus pneumoniae GA47388]
gi|353871389|gb|EHE51260.1| thymidylate kinase [Streptococcus pneumoniae GA54644]
gi|353875333|gb|EHE55185.1| thymidylate kinase [Streptococcus pneumoniae NP127]
gi|353875910|gb|EHE55760.1| thymidylate kinase [Streptococcus pneumoniae GA47751]
gi|353888377|gb|EHE68151.1| thymidylate kinase [Streptococcus pneumoniae GA08780]
gi|353894261|gb|EHE74003.1| thymidylate kinase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379532804|gb|EHY98028.1| thymidylate kinase [Streptococcus pneumoniae GA02270]
gi|379532942|gb|EHY98165.1| thymidylate kinase [Streptococcus pneumoniae GA02714]
gi|379559158|gb|EHZ24188.1| thymidylate kinase [Streptococcus pneumoniae GA14373]
gi|379583713|gb|EHZ48590.1| thymidylate kinase [Streptococcus pneumoniae GA43257]
gi|379587714|gb|EHZ52561.1| thymidylate kinase [Streptococcus pneumoniae GA44386]
gi|379588231|gb|EHZ53076.1| thymidylate kinase [Streptococcus pneumoniae GA43264]
gi|379611723|gb|EHZ76445.1| thymidylate kinase [Streptococcus pneumoniae GA49542]
gi|395588361|gb|EJG48691.1| thymidylate kinase [Streptococcus pneumoniae 2070425]
gi|395588579|gb|EJG48907.1| thymidylate kinase [Streptococcus pneumoniae 2070531]
gi|395875697|gb|EJG86775.1| thymidylate kinase [Streptococcus pneumoniae SPAR55]
gi|395880142|gb|EJG91195.1| thymidylate kinase [Streptococcus pneumoniae GA17301]
gi|395894237|gb|EJH05217.1| thymidylate kinase [Streptococcus pneumoniae GA56113]
gi|395900207|gb|EJH11146.1| thymidylate kinase [Streptococcus pneumoniae GA19998]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
>gi|20806623|ref|NP_621794.1| thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
gi|23821773|sp|Q8RDE6.1|KTHY_THETN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|20515069|gb|AAM23398.1| Thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
Length = 208
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + EG+D CGKT+Q L +L+ G+ + + R P T VG+ + L ++ +L
Sbjct: 2 RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPG-GTRVGEKVREILLDRENLI 60
Query: 114 -DHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K L G +IVDR+ S + A+G+ +E K
Sbjct: 61 FPVTEMLLYASSRAQ---LVEEKILPALSKGQMVIVDRFIDSSYVYQGYARGLGLEKVKI 117
Query: 167 APEIGL--LAPDSVLYLDIPPEKAAE-RGGYGGERY--EHLEFQRKVAQCY-QMLRD--S 218
EI L PD +Y+DI PE+A + R G +R E EF +KV + Y ++++D
Sbjct: 118 VNEIATKGLFPDITVYIDITPEEAIKRRQGKKADRLEGEDYEFHKKVREGYLRLVKDFPE 177
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
+ +ID Q + V K + + V + + K
Sbjct: 178 RFILIDGMQEVLAVHKMVVKAVEEYLKGAK 207
>gi|418182563|ref|ZP_12819124.1| thymidylate kinase [Streptococcus pneumoniae GA43380]
gi|353850800|gb|EHE30804.1| thymidylate kinase [Streptococcus pneumoniae GA43380]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R R E L+ +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E+V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEEVVETTKAVLFDRMGLAK 212
>gi|163755232|ref|ZP_02162352.1| thymidylate kinase [Kordia algicida OT-1]
gi|161324652|gb|EDP95981.1| thymidylate kinase [Kordia algicida OT-1]
Length = 206
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+ + +EG+D GK++Q + LE GH V L F +G+MI + L Q D
Sbjct: 3 KNIFIAIEGIDGSGKSTQAKNIAKRLEAEGHKVYL-TFEPTDMRIGKMIRSILGGQEKAD 61
Query: 114 DHTIHLLFSANRWE----KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC---K 166
+ I LF A+R + + + + KL G T+I DRY +S A+ A +D++W
Sbjct: 62 EKVIAALFVADRLDHILHETNGILKKLAEGYTVITDRYYFSSYAYHGAH-MDMDWVIQSN 120
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCY 212
+L P +++D+ PE A +R E YE L+ + V Y
Sbjct: 121 KMAADILKPTVNIFVDVSPEVAMKRINANRETVEIYETLDNLKAVQSQY 169
>gi|296109540|ref|YP_003616489.1| thymidylate kinase [methanocaldococcus infernus ME]
gi|295434354|gb|ADG13525.1| thymidylate kinase [Methanocaldococcus infernus ME]
Length = 184
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+ L L G W +G++I +YLS+ ++D+ +
Sbjct: 2 FIVFEGIDGSGKTTLSKMLAKELSGY------WTCEPTDGEIGRLIRSYLSS-GNIDNIS 54
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+A+R E +E L +G +I DRY YS +A+ S+ G++ + + PD
Sbjct: 55 LSLLFAADRVEHCKEIEKVLNSGRDVICDRYLYSSIAYQSSLGVEENFLWEINKYAIKPD 114
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQ-SIEDVEK 234
V L + ++A +R G + +E+ F KV + Y ++ + ++ +ID SIE+
Sbjct: 115 LVFLLVVDVDEAMKRVK-GKDIFENKNFLEKVQEKYLELAKRFNFIVIDTTNISIEEAYN 173
Query: 235 QLK 237
+++
Sbjct: 174 KVR 176
>gi|322374522|ref|ZP_08049036.1| dTMP kinase [Streptococcus sp. C300]
gi|321280022|gb|EFX57061.1| dTMP kinase [Streptococcus sp. C300]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E LKAG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALKAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVDATKAVLFDRMGLDK 212
>gi|297619540|ref|YP_003707645.1| thymidylate kinase [Methanococcus voltae A3]
gi|297378517|gb|ADI36672.1| thymidylate kinase [Methanococcus voltae A3]
Length = 223
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GK++Q L + + + + VG++I LS + + T
Sbjct: 28 FIVFEGIDGSGKSTQAKMLADRINAI------LDYEPTNSEVGKLIRKGLS-EGCFEKET 80
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+ +R E + KL+ ++ DRY YS + + + +GIDIE+ PD
Sbjct: 81 LALLFAGDRVEHCKELAKKLEKNH-IVCDRYVYSSIVYQNTQGIDIEYIYNINRYARVPD 139
Query: 177 SVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWK---------- 221
V+ LD+ PE + +R G E +E +EFQ+ + + Y Q+ D K
Sbjct: 140 IVVLLDLNPELSMLRVNDRTG-NNEIFEKIEFQKIIREKYLQIFEDEKNKNKKSMFKPPI 198
Query: 222 --IIDACQSIEDVEKQLKEIV 240
IDA +SI ++ ++ +++
Sbjct: 199 YIKIDANKSILELHNEIYDLI 219
>gi|262283117|ref|ZP_06060884.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA]
gi|262261369|gb|EEY80068.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG LV LEG D GK+S L+ LE G V R P + + I + N +
Sbjct: 3 RGLLVSLEGPDGAGKSSVLEALVPILEAKGQQVVTTREPG-GVPISEAIREVILDQNNTE 61
Query: 112 LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEW 164
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+ DIEW
Sbjct: 62 MDGKTELLLYIASR--RQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEW 119
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQ--CYQMLR 216
L PD LY D+ E+ R R E LE ++V Q Y + +
Sbjct: 120 LNQFATDGLKPDLTLYFDLDVEEGLARIAKNKNREVNRLDLEGLEMHQRVRQGYLYSLEK 179
Query: 217 DSSWKI-IDACQSIEDVEK 234
D + IDA Q++EDV K
Sbjct: 180 DPERLVKIDASQALEDVVK 198
>gi|418086671|ref|ZP_12723841.1| thymidylate kinase [Streptococcus pneumoniae GA47033]
gi|418202212|ref|ZP_12838642.1| thymidylate kinase [Streptococcus pneumoniae GA52306]
gi|419455336|ref|ZP_13995296.1| thymidylate kinase [Streptococcus pneumoniae EU-NP04]
gi|419481957|ref|ZP_14021750.1| thymidylate kinase [Streptococcus pneumoniae GA40563]
gi|421285541|ref|ZP_15736318.1| thymidylate kinase [Streptococcus pneumoniae GA60190]
gi|353758932|gb|EHD39518.1| thymidylate kinase [Streptococcus pneumoniae GA47033]
gi|353868015|gb|EHE47905.1| thymidylate kinase [Streptococcus pneumoniae GA52306]
gi|379580831|gb|EHZ45720.1| thymidylate kinase [Streptococcus pneumoniae GA40563]
gi|379629793|gb|EHZ94387.1| thymidylate kinase [Streptococcus pneumoniae EU-NP04]
gi|395887520|gb|EJG98535.1| thymidylate kinase [Streptococcus pneumoniae GA60190]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEVKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R R E L+ +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E+V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEEVVETTKAVLFDRMGLAK 212
>gi|169832724|ref|YP_001694387.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6]
gi|419493079|ref|ZP_14032806.1| thymidylate kinase [Streptococcus pneumoniae GA47210]
gi|421289574|ref|ZP_15740325.1| thymidylate kinase [Streptococcus pneumoniae GA54354]
gi|421304893|ref|ZP_15755549.1| thymidylate kinase [Streptococcus pneumoniae GA62331]
gi|238688287|sp|B1IBA2.1|KTHY_STRPI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|168995226|gb|ACA35838.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6]
gi|379595117|gb|EHZ59926.1| thymidylate kinase [Streptococcus pneumoniae GA47210]
gi|395888815|gb|EJG99825.1| thymidylate kinase [Streptococcus pneumoniae GA54354]
gi|395905555|gb|EJH16460.1| thymidylate kinase [Streptococcus pneumoniae GA62331]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
>gi|452943349|ref|YP_007499514.1| thymidylate kinase [Hydrogenobaculum sp. HO]
gi|452881767|gb|AGG14471.1| thymidylate kinase [Hydrogenobaculum sp. HO]
Length = 200
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++V EG+D GK++Q + + L+ +V+L R P +T +G+ I L Q LD T
Sbjct: 11 IIVFEGIDGSGKSTQINIVYELLKD--KNVKLLREPG-STEMGEKIRDILKLQK-LDPKT 66
Query: 117 IHLLFSANRWEKRSMMEAKLKAGT-TLIVDRYSYSGVAFSS-AKGIDIEWCKAPEI---G 171
L A+R M+E K L++DRY YS +A+ GIDI + KA
Sbjct: 67 QTFLIEASRAH---MIEKHFKGFEGILLLDRYIYSTIAYQGYGFGIDINFLKALNDFVCD 123
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIE 230
+ P+ V LDI P+ A R + +E LEF +KV Y ++ ++ ++ IDA +++E
Sbjct: 124 IYIPNIVFLLDIDPKIALLRLKREKDVFEDLEFLKKVRDGYLKLAKEYNFYTIDASKNVE 183
Query: 231 DVEKQLKEIV 240
+ ++ I+
Sbjct: 184 AITNEITNIL 193
>gi|295837412|ref|ZP_06824345.1| dTMP kinase [Streptomyces sp. SPB74]
gi|295826517|gb|EDY43005.2| dTMP kinase [Streptomyces sp. SPB74]
Length = 1172
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 20/228 (8%)
Query: 34 SCTPFRMESSSSLRIGNI----DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +LR G + G + LEG D GK++Q L ++ G GH V L
Sbjct: 469 SGVPLRRDLREALRGGEPVQAPATNGFFLALEGGDGAGKSTQAEALAEWIRGKGHEVVLT 528
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I DR
Sbjct: 529 REPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVITDR 587
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I G L P + LD+ PE A ER +R E
Sbjct: 588 YIDSSVAYQGA-GRDLSPVEIARISRWATGGLVPHLTVLLDVAPEAARERFTEAPDRLES 646
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L ++ + ++D Q E V + ++ LDQ+
Sbjct: 647 EPAEFHARVRTGFLTLAAAAPERYLVVDGAQEPESVTRTVRH-RLDQL 693
>gi|406587506|ref|ZP_11062386.1| thymidylate kinase [Streptococcus sp. GMD1S]
gi|419813604|ref|ZP_14338417.1| thymidylate kinase [Streptococcus sp. GMD2S]
gi|419816967|ref|ZP_14341138.1| thymidylate kinase [Streptococcus sp. GMD4S]
gi|404466508|gb|EKA11840.1| thymidylate kinase [Streptococcus sp. GMD4S]
gi|404472715|gb|EKA17130.1| thymidylate kinase [Streptococcus sp. GMD2S]
gi|404473019|gb|EKA17390.1| thymidylate kinase [Streptococcus sp. GMD1S]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEENGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLDK 212
>gi|383790740|ref|YP_005475314.1| thymidylate kinase [Spirochaeta africana DSM 8902]
gi|383107274|gb|AFG37607.1| thymidylate kinase [Spirochaeta africana DSM 8902]
Length = 219
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
M + G S +VLEG+D G T+Q L L G V P S+G
Sbjct: 1 MHTEHDTATGFSGSHPRFIVLEGIDGAGTTTQAHLLARALAQAGEQVYATCEP-TDGSIG 59
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEKRSMME----AKLKAGTTLIVDRYSYSGVAFS 155
++I LS + HT+ LF+A+R E E A+L G +I DRY +S +A+
Sbjct: 60 RLIRTLLSGTEQVTPHTMAHLFAADRCEHVYAPEHGIVARLARGDWVISDRYVFSSLAY- 118
Query: 156 SAKGIDIEWCKAPEI--GLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLEFQRKVAQC 211
+G D+ + + ++ G+ P V +L + + A R G + YE+ FQ KV+
Sbjct: 119 --QGPDVGFERVRQLNSGIPLPRWVFHLSLSGKLAMSRLSGRSTLDIYENTAFQDKVSHA 176
Query: 212 YQML------RDSSWKIIDACQSIEDVEKQL 236
Y D++W+++DA S++ + + +
Sbjct: 177 YSTAYQQFPQEDTTWQVLDATDSVDKIHRSI 207
>gi|358464707|ref|ZP_09174667.1| dTMP kinase [Streptococcus sp. oral taxon 058 str. F0407]
gi|357066578|gb|EHI76723.1| dTMP kinase [Streptococcus sp. oral taxon 058 str. F0407]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEQIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALQAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D++ K
Sbjct: 179 KERNRIAKIDASLPLEQVVETTKTVLFDRMGLAK 212
>gi|261338416|ref|ZP_05966300.1| dTMP kinase [Bifidobacterium gallicum DSM 20093]
gi|270276387|gb|EFA22241.1| dTMP kinase [Bifidobacterium gallicum DSM 20093]
Length = 200
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT---TSVGQMISAYLSNQSHLD 113
+ EG+D GKT+Q L L+ G SVE+ R P T S+ +++ +++ S +D
Sbjct: 2 FITFEGIDGAGKTTQVKLLAQALQEAGRSVEVTREPGGTALGASLRRLLLEGVADGSAID 61
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKAPEI- 170
+H L+F+A+R + + ++ ++ G +I DRY S VA+ + I + +A +
Sbjct: 62 EHAEALMFAADRAQHVAQVIRPAMQRGDDVICDRYIDSSVAYQGGGRDIGADQIRALSMW 121
Query: 171 --GLLAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQMLRDSS---WKII 223
G L PD + LD+ P +A R +R E EF R+ + + + + +++I
Sbjct: 122 ATGGLVPDLTIVLDLDPALSAARLNRPADRMESAGDEFARRTREAFLAMAAAEPERFRVI 181
Query: 224 DACQSIEDVEKQLKEIV 240
DA +E + ++ V
Sbjct: 182 DASLPVERIAADVRAAV 198
>gi|418977673|ref|ZP_13525487.1| dTMP kinase [Streptococcus mitis SK575]
gi|383349641|gb|EID27570.1| dTMP kinase [Streptococcus mitis SK575]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 ---SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
S IDA +E V + K ++ D++ K
Sbjct: 179 KEGSRIVKIDASFPLEQVVETTKAVLFDRMGLAK 212
>gi|334338718|ref|YP_004543698.1| thymidylate kinase [Desulfotomaculum ruminis DSM 2154]
gi|334090072|gb|AEG58412.1| thymidylate kinase [Desulfotomaculum ruminis DSM 2154]
Length = 207
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--S 110
S+G +V EG+D GK++Q L YL R P T VG+ I +L +
Sbjct: 2 SKGLFIVFEGVDGSGKSTQLDLLNKYLTARQIPTCATREPG-GTPVGEKIREFLLDPVFQ 60
Query: 111 HLDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+ HT LL++A R + ++ L+ GT ++ DRY S +A+ +G+DIE+ K
Sbjct: 61 EMQGHTESLLYAAARAQLVAQVIRPALEQGTVVLCDRYIDSSLAYQGYGRGLDIEFLKKI 120
Query: 169 E---IGLLAPDSVLYLDIPPEK--AAERGGYGGERYEH--LEFQRKVAQCYQML--RDSS 219
G L P L +PPE+ A R +R E+ ++F R+V Y L ++ S
Sbjct: 121 NELGTGGLQPHITFLLSLPPEEGLARSRRTKSADRLENEAMDFHRRVWTGYLALARQNQS 180
Query: 220 WKIIDACQSIEDVEKQL 236
+ ++DA +SIE + +++
Sbjct: 181 YVVLDARRSIETLHEEI 197
>gi|331266594|ref|YP_004326224.1| thymidylate kinase [Streptococcus oralis Uo5]
gi|326683266|emb|CBZ00884.1| thymidylate kinase [Streptococcus oralis Uo5]
Length = 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALGAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVDTTKAVLFDRMGLAK 212
>gi|318076468|ref|ZP_07983800.1| thymidylate kinase [Streptomyces sp. SA3_actF]
Length = 896
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 SCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +LR G + + G + LEG D GK++Q L ++ GH V L
Sbjct: 200 SGVPLRRDLREALRGGEPEQAATTTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLT 259
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I DR
Sbjct: 260 REPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAIVITDR 318
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I G L P+ + LD+ PE A ER +R E
Sbjct: 319 YIDSSVAYQGA-GRDLSPVEIARISRWATGGLVPNLTVLLDVAPEAARERFTEAPDRLES 377
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L ++ + ++D Q E V + ++ LDQ+
Sbjct: 378 EPAEFHARVRAGFLTLAAAAPERYLVVDGAQEPESVTRTVRH-RLDQL 424
>gi|318060890|ref|ZP_07979611.1| thymidylate kinase [Streptomyces sp. SA3_actG]
Length = 1199
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 SCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +LR G + + G + LEG D GK++Q L ++ GH V L
Sbjct: 503 SGVPLRRDLREALRGGEPEQAATTTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLT 562
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I DR
Sbjct: 563 REPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAIVITDR 621
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I G L P+ + LD+ PE A ER +R E
Sbjct: 622 YIDSSVAYQGA-GRDLSPVEIARISRWATGGLVPNLTVLLDVAPEAARERFTEAPDRLES 680
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L ++ + ++D Q E V + ++ LDQ+
Sbjct: 681 EPAEFHARVRAGFLTLAAAAPERYLVVDGAQEPESVTRTVRH-RLDQL 727
>gi|302520927|ref|ZP_07273269.1| thymidylate kinase [Streptomyces sp. SPB78]
gi|302429822|gb|EFL01638.1| thymidylate kinase [Streptomyces sp. SPB78]
Length = 1202
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 SCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +LR G + + G + LEG D GK++Q L ++ GH V L
Sbjct: 502 SGVPLRRDLREALRGGEPEQAATTTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLT 561
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I DR
Sbjct: 562 REPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAIVITDR 620
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I G L P+ + LD+ PE A ER +R E
Sbjct: 621 YIDSSVAYQGA-GRDLSPVEIARISRWATGGLVPNLTVLLDVAPEAARERFTEAPDRLES 679
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L ++ + ++D Q E V + ++ LDQ+
Sbjct: 680 EPAEFHARVRAGFLTLAAAAPERYLVVDGAQEPESVTRTVRH-RLDQL 726
>gi|333025376|ref|ZP_08453440.1| putative thymidylate kinase [Streptomyces sp. Tu6071]
gi|332745228|gb|EGJ75669.1| putative thymidylate kinase [Streptomyces sp. Tu6071]
Length = 1193
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 SCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +LR G + + G + LEG D GK++Q L ++ GH V L
Sbjct: 502 SGVPLRRDLREALRGGEPEQAATTTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLT 561
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I DR
Sbjct: 562 REPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAIVITDR 620
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I G L P+ + LD+ PE A ER +R E
Sbjct: 621 YIDSSVAYQGA-GRDLSPVEIARISRWATGGLVPNLTVLLDVAPEAARERFTEAPDRLES 679
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L ++ + ++D Q E V + ++ LDQ+
Sbjct: 680 EPAEFHARVRAGFLTLAAAAPERYLVVDGAQEPESVTRTVRH-RLDQL 726
>gi|223939277|ref|ZP_03631158.1| dTMP kinase [bacterium Ellin514]
gi|223892109|gb|EEF58589.1| dTMP kinase [bacterium Ellin514]
Length = 213
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
+G L+ EG + CGK++Q S L L LGH + + R P T +G+ I L S ++H
Sbjct: 3 KGLLISFEGTEGCGKSTQISLLTERLRALGHVIRMVREPG-GTPIGEEIRYTLKHSVKNH 61
Query: 112 -LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+ LL +A+R + R ++ L+AG ++ DRY S A+ +G+D++ +A
Sbjct: 62 AMTSEAELLLMNASRAQLVREVLRPALEAGEIIVCDRYYDSTTAYQGYGRGLDLKLVQAV 121
Query: 169 ---EIGLLAPDSVLYLDIPPEKAAERGG-------YGGERYEHLE--FQRKVAQCYQMLR 216
+G PD L L +PPE +A R + +R E + F +V+Q Y+ L
Sbjct: 122 IDFAVGDTRPDLTLLLRVPPEVSAARLASRQATLPFIRDRIEEADQSFFNRVSQGYEALA 181
Query: 217 DS---SWKIIDACQSIEDV 232
+ + IDA S+++V
Sbjct: 182 TAHPERIQTIDASSSVQNV 200
>gi|417937166|ref|ZP_12580470.1| dTMP kinase [Streptococcus infantis X]
gi|343398851|gb|EGV11377.1| dTMP kinase [Streptococcus infantis X]
Length = 212
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS +L LE R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI EK ER +R E L+ RKV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEKGLERIAANSDREVNRLDLEGLDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA + V + K+++ D++
Sbjct: 179 KEGERIVKIDASLPLNQVVENTKQVLFDRM 208
>gi|302535280|ref|ZP_07287622.1| integral membrane protein with kinase activity [Streptomyces sp. C]
gi|302444175|gb|EFL15991.1| integral membrane protein with kinase activity [Streptomyces sp. C]
Length = 1094
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 37 PFRMESSSSLRIGNI----DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP 92
P R + +LR G + G + LEG D GK++Q L ++ G GH V + R P
Sbjct: 494 PLRRDLREALRGGEPVQAPPTTGFFIALEGGDGAGKSTQVQALAEWIRGKGHEVVVTREP 553
Query: 93 DRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSY 149
T VG+ + + L + S L + LL++A+R E S++ L+ G +I DRY
Sbjct: 554 G-ATPVGKRLRSILLDISSAGLSNRAEALLYAADRAEHVDSLVRPALERGAVVITDRYID 612
Query: 150 SGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH--L 202
S VA+ A G D+ + I G L P+ + LD+ PE A ER +R E
Sbjct: 613 SSVAYQGA-GRDLSPTEIARISRWATGGLVPNLTVLLDVSPETARERFTEAPDRLESEPT 671
Query: 203 EFQRKVAQCYQMLRDSS---WKIIDACQ 227
EF ++V + L + + ++DA Q
Sbjct: 672 EFHQRVRAGFLTLAAADPGRYLVVDAGQ 699
>gi|269925799|ref|YP_003322422.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798]
gi|269789459|gb|ACZ41600.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798]
Length = 216
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SHLDD 114
+ EG + GKT+Q L + LE L V L R P T VG+ I L LD
Sbjct: 2 FITFEGPEGSGKTTQARMLATALETLQCKVVLTREPG-GTLVGEEIRKILLGPLGKDLDP 60
Query: 115 HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGID-IEWCKAPEIG 171
I LLFSA R + R +++ + +G +I DRY+ S A+ GI E +A ++G
Sbjct: 61 KCILLLFSAARAQLVRHIIKPAIDSGKIVICDRYADSTRAYQWGGDGIPRDEVERAIQLG 120
Query: 172 L--LAPDSVLYLDIPPEKAAER----------GGYGGERYEHLEFQRKVAQCYQMLR--- 216
L PD YLD+ PE+ R G+ LEF ++V + Y L
Sbjct: 121 TEGLEPDITFYLDLSPEEGLRRRRTDSARGAESGWNSMDARELEFHQRVREAYLSLAKEY 180
Query: 217 DSSWKIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
S + +IDA IED+ + + EIV ++ + GK
Sbjct: 181 SSRFYVIDAAGRIEDIHRTIIEIVNKKLQSRIGGK 215
>gi|332284311|ref|YP_004416222.1| thymidylate kinase [Pusillimonas sp. T7-7]
gi|330428264|gb|AEC19598.1| Thymidylate kinase [Pusillimonas sp. T7-7]
Length = 216
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++G ++V++G + GK + + ++L GLG V + R P T++G+ I L ++S +
Sbjct: 2 NKGLMIVVDGGNGAGKGTCLHDIEAFLSGLGLEVVMTREPG-GTAIGEQIREILLDKSAV 60
Query: 113 D--DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+ D T +LF+A R + R + + AG ++ DR+ + ++F A+G+D+E +
Sbjct: 61 EMCDVTELMLFAAARAQHVRQKIVPAINAGKVVVSDRFDSATISFQHYARGLDLELINSL 120
Query: 169 E---IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCY--QMLRDS 218
+ L PD + LD+ P +R G ++ LE F + Q Y Q L D
Sbjct: 121 NDIAVAGLRPDFTIILDLDPAVGLQRVASRGSDFDRLEKENLSFLERARQGYIKQALADP 180
Query: 219 S-WKIIDACQSIEDVEKQLKEIVLDQVTACKK 249
+ +DA QS + V ++ ++V +QV A K
Sbjct: 181 QRFATVDASQSFDQVRHEVLQLV-EQVIARHK 211
>gi|255327688|ref|ZP_05368754.1| dTMP kinase [Rothia mucilaginosa ATCC 25296]
gi|255295362|gb|EET74713.1| dTMP kinase [Rothia mucilaginosa ATCC 25296]
Length = 238
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG +V+EG D GKT+Q + L L G G+ V R P T +G+ + A + + Q
Sbjct: 21 RGLFIVVEGGDGAGKTTQLALLDEALRGRGYRVITTREPG-GTEIGEKLRALVLEAGQGT 79
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE------ 163
+DD T L+F+A+R S ++ L G ++ DRY S A+ + + +E
Sbjct: 80 IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGVETIVDLS 139
Query: 164 -WCKAPEIGLLAPDSVLYLDIP----PEKAAERGGYGGERYEHLEFQRKVAQCYQML--- 215
W A L PD+ L L +P E+ +RG E F+ ++ ++ +
Sbjct: 140 RWATAN----LVPDATLLLSVPLSAEQERMDQRGTVDRIEAEGTAFKARIHGAFEQIARE 195
Query: 216 -RDSSWKIIDACQSIEDVEKQLKEIV 240
+ S +IID +IE V ++ E++
Sbjct: 196 DANGSHRIIDGVGTIEQVHARVLEVI 221
>gi|288932600|ref|YP_003436660.1| thymidylate kinase [Ferroglobus placidus DSM 10642]
gi|288894848|gb|ADC66385.1| thymidylate kinase [Ferroglobus placidus DSM 10642]
Length = 204
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 10/185 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ +EG+D GKT+ + + L LG + + P G++I ++ D
Sbjct: 3 LIAVEGIDGAGKTTIANFVREELLKLGIPAIVLKEPTEG-KYGKIIK---ESEKRFDPEK 58
Query: 117 IHLLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-EWCKAPEIGLL 173
LF +R E +++++ A L G ++I+DRY YS VA+ A+G+D E K E
Sbjct: 59 ELELFILDRKEDVEKNILPA-LNKGISVIMDRYYYSSVAYQGARGLDPEEILKVNESIAP 117
Query: 174 APDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQMLRDSSWKIIDACQSIED 231
PD + LD+ PE A +R + +E LE+ +KV + + ++ +++DA +S+E+
Sbjct: 118 VPDLTIILDVEPEIALKRIKNRKKLTPFEELEYLKKVREIFLSIKRPEIRVVDASKSLEE 177
Query: 232 VEKQL 236
V+ ++
Sbjct: 178 VKDEV 182
>gi|208780179|ref|ZP_03247521.1| thymidylate kinase [Francisella novicida FTG]
gi|208743828|gb|EDZ90130.1| thymidylate kinase [Francisella novicida FTG]
Length = 209
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ S + YLE + R P T ++ + L N+ D
Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKY---DEE 61
Query: 117 IH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
IH L+ A R + R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 62 IHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALN 121
Query: 170 IGLL---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWK 221
L PD V+YLDI P +R G +R E LEF + ++ +++DS
Sbjct: 122 DNFLNGCEPDLVIYLDIDPMLGLQRAQKVGSPDRIEKAGLEFFNRTRNVFKDLVKDSDNA 181
Query: 222 I-IDACQSIEDVEKQLKEIVLDQ 243
I IDA +SI++VEKQ+ ++LD+
Sbjct: 182 IEIDAAKSIQEVEKQIY-LILDK 203
>gi|217077269|ref|YP_002334987.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
gi|226732664|sp|B7IHT2.1|KTHY_THEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|217037124|gb|ACJ75646.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
Length = 201
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ EG+D GK++Q + L YL+ G V R P T ++ L N +++ +
Sbjct: 2 FIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIREILLDNNLNINKRS 61
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE---IG 171
LLF A+R + +++ LK G ++ DR+S S +A+ A+ I +E
Sbjct: 62 ELLLFLASRAQLVEEVIKPHLKRGFFVLADRFSDSSIAYQGGARNIGVETVSTLNDFATD 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCY---QMLRDSSWKII 223
+ PD V Y+DIP + A ER + + LE F KV Y LRD+ + II
Sbjct: 122 NIYPDIVFYIDIPTKIAMER--LKDKNLDRLEKEGQIFLEKVRNTYLKLSKLRDNFF-II 178
Query: 224 DACQSIEDVEKQLKEIV 240
D +SI++V ++K IV
Sbjct: 179 DGTKSIDNVFAEIKSIV 195
>gi|296126817|ref|YP_003634069.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
gi|296018633|gb|ADG71870.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
Length = 203
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQ-----MISAYLSN 108
G L+V+EG+D GK++ L + L +G ++ F G M+S L
Sbjct: 2 NGKLIVIEGIDGSGKSTHGMLLTNELNNIGIK-SIYTFEPTHAYFGSKLRESMLSKDLKP 60
Query: 109 QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC-K 166
+ L LF A+R E ++M++ + G +I+DRY YS +A+ AKGID E+
Sbjct: 61 EEELS------LFIADRKEHVQNMIKPAINDGYAVILDRYMYSSIAYQGAKGIDREYIYN 114
Query: 167 APEIGLLAPDSVLYLDIPPEKA----AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
+ ++ PD V +P E A E+ G+ +R+E+ + +KV + + ++
Sbjct: 115 LHKDFIIEPDLVFIFHLPIETALNRIMEKRGF-VDRFENKNYLKKVDEIFSSFNAANIHH 173
Query: 223 IDACQSIEDVEKQLKEIVLD 242
I+A + E ++ +L +I+ D
Sbjct: 174 INADKDEEALKNELMQIIRD 193
>gi|56707291|ref|YP_169187.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110669761|ref|YP_666318.1| thymidylate kinase [Francisella tularensis subsp. tularensis
FSC198]
gi|134301328|ref|YP_001121296.1| thymidylate kinase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|254369973|ref|ZP_04985981.1| hypothetical protein FTBG_01572 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874129|ref|ZP_05246839.1| thymidylate kinase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379716490|ref|YP_005304826.1| thymidylate kinase [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725173|ref|YP_005317359.1| thymidylate kinase [Francisella tularensis subsp. tularensis
TI0902]
gi|385793875|ref|YP_005830281.1| thymidylate kinase [Francisella tularensis subsp. tularensis
NE061598]
gi|421751054|ref|ZP_16188112.1| thymidylate kinase [Francisella tularensis subsp. tularensis
AS_713]
gi|421752910|ref|ZP_16189920.1| thymidylate kinase [Francisella tularensis subsp. tularensis 831]
gi|421754727|ref|ZP_16191693.1| thymidylate kinase [Francisella tularensis subsp. tularensis
80700075]
gi|421756642|ref|ZP_16193545.1| thymidylate kinase [Francisella tularensis subsp. tularensis
80700103]
gi|421758509|ref|ZP_16195355.1| thymidylate kinase [Francisella tularensis subsp. tularensis
70102010]
gi|424673777|ref|ZP_18110708.1| thymidylate kinase [Francisella tularensis subsp. tularensis
70001275]
gi|73920819|sp|Q5NIF5.1|KTHY_FRATT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|122971099|sp|Q14JV8.1|KTHY_FRAT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|166221744|sp|A4IW74.1|KTHY_FRATW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56603783|emb|CAG44750.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320094|emb|CAL08133.1| thymidylate kinase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049105|gb|ABO46176.1| thymidylate kinase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568219|gb|EDN33873.1| hypothetical protein FTBG_01572 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840128|gb|EET18564.1| thymidylate kinase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158410|gb|ADA77801.1| thymidylate kinase [Francisella tularensis subsp. tularensis
NE061598]
gi|377826622|gb|AFB79870.1| Thymidylate kinase [Francisella tularensis subsp. tularensis
TI0902]
gi|377828167|gb|AFB78246.1| Thymidylate kinase [Francisella tularensis subsp. tularensis
TIGB03]
gi|409088929|gb|EKM88985.1| thymidylate kinase [Francisella tularensis subsp. tularensis 831]
gi|409089040|gb|EKM89094.1| thymidylate kinase [Francisella tularensis subsp. tularensis
AS_713]
gi|409090490|gb|EKM90506.1| thymidylate kinase [Francisella tularensis subsp. tularensis
80700075]
gi|409092201|gb|EKM92179.1| thymidylate kinase [Francisella tularensis subsp. tularensis
70102010]
gi|409093381|gb|EKM93327.1| thymidylate kinase [Francisella tularensis subsp. tularensis
80700103]
gi|417435552|gb|EKT90442.1| thymidylate kinase [Francisella tularensis subsp. tularensis
70001275]
Length = 209
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ S + YLE + R P T ++ + L N+ + H+
Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64
Query: 117 ---IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL 172
+ ++++ R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124
Query: 173 L---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWKI-I 223
L PD V+YLDI P +R G +R E LEF + + ++ +++DS I I
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRTRKVFKDLVKDSDNAIEI 184
Query: 224 DACQSIEDVEKQLKEIVLDQ 243
DA +SI++VEKQ+ ++LD+
Sbjct: 185 DAAKSIQEVEKQIY-LILDK 203
>gi|422325427|ref|ZP_16406462.1| thymidylate kinase [Rothia mucilaginosa M508]
gi|353343144|gb|EHB87463.1| thymidylate kinase [Rothia mucilaginosa M508]
Length = 238
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG +V+EG D GKT+Q + L L G G+ V R P T +G+ + A + + Q
Sbjct: 21 RGLFIVVEGGDGAGKTTQLALLDEALRGRGYRVITTREPG-GTEIGEKLRALVLEAGQGT 79
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE------ 163
+DD T L+F+A+R S ++ L G ++ DRY S A+ + + +E
Sbjct: 80 IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGVETIVDLS 139
Query: 164 -WCKAPEIGLLAPDSVLYLDIP----PEKAAERGGYGGERYEHLEFQRKVAQCYQML--- 215
W A L PD+ L L +P E+ +RG E F+ ++ ++ +
Sbjct: 140 RWATAN----LVPDATLLLSVPLSAEQERMDQRGTVDRIEAEGAAFKARIHGAFEQIARE 195
Query: 216 -RDSSWKIIDACQSIEDVEKQLKEIV 240
+ S +IID +IE V ++ E++
Sbjct: 196 DANGSHRIIDGVGTIEQVHARVLEVI 221
>gi|347600627|gb|AEP15114.1| hypothetical protein EOVG_00177 [Emiliania huxleyi virus 88]
Length = 327
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS---- 107
+ RG + V+EG D CGK +Q + L LE + V+ FP+ G +I L+
Sbjct: 103 ERRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHG 162
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------G 159
+ +LD L++ NRW + ++ + G +I+DRY S +A A
Sbjct: 163 DIKNLDPFLFASLYAQNRWSVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY 212
E + +GL + ++YLD+PPE K R LE++ V + Y
Sbjct: 223 KQTELFENEILGLPRANHIIYLDLPPEVARTAMDKDTTRAALDQNELAPLEYKNNVRKIY 282
Query: 213 QMLRDSSWKIIDACQSIED 231
+++ + D + ++D
Sbjct: 283 LEQKNTLRRTYDVVKCMDD 301
>gi|291278502|ref|YP_003495337.1| dTMP kinase [Deferribacter desulfuricans SSM1]
gi|290753204|dbj|BAI79581.1| dTMP kinase [Deferribacter desulfuricans SSM1]
Length = 215
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+ +V++G+D CGKT+QC L YL +G ++ L + P T + + + +S ++
Sbjct: 6 KSFFLVIDGIDGCGKTTQCKLLKEYLNNIGLNILLTKEPGGTKTGTILRNILISTDYDIE 65
Query: 114 DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIG 171
+T LL+SA+R E ++ ++ L +G T+I DR+ S A+ A+G++ + + E
Sbjct: 66 PNTELLLYSADRLEHQKKIIIPGLNSGKTIICDRFISSTYAYQIFARGLEKSFLQYLEQH 125
Query: 172 LLA--PDSVLYLDIPPEKAAER-----------GGYGGERYEHLEFQRKVAQCYQMLRDS 218
+ PD + +D+P E A ER G ++F +KV + + +
Sbjct: 126 TVFKWPDLTIIIDLPVEIALERALKRLKDQNCENSEGKFEKNGIDFYKKVREGFLWYSKN 185
Query: 219 --SWKIIDACQSIEDVEKQLKEIV 240
+ K+I+ + I+ + K++K IV
Sbjct: 186 YKNVKVINGDRDIDSLFKEIKSIV 209
>gi|333895935|ref|YP_004469809.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111200|gb|AEF16137.1| Thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 205
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMI-SAYLSNQSHL 112
+G L+ EG+D GKT+Q + L YL +G + + R P T++G+ I L ++++
Sbjct: 3 KGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPG-GTAIGEKIREILLDKKNNI 61
Query: 113 DDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK---A 167
LL++A+R E + ++ L G +I+DR+ S + + A+G+ +E + +
Sbjct: 62 VPSAEALLYAASRAELVKEVIIPSLNDGKIVILDRFVDSSIVYQGYARGLGVEVVEEINS 121
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQMLRDSS---W 220
I L PD +YLDI P+ R ++ E EF KV + Y L S +
Sbjct: 122 IAIDGLVPDLTVYLDIKPKDTLMRIDRRKDKDRLEIEDAEFHEKVYEGYMKLIKSKPGRY 181
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTAC 247
I+DA I ++K +++D+V+
Sbjct: 182 FIVDATHDIYYIQK----VIIDEVSKI 204
>gi|322388016|ref|ZP_08061623.1| thymidylate kinase [Streptococcus infantis ATCC 700779]
gi|419844262|ref|ZP_14367560.1| dTMP kinase [Streptococcus infantis ATCC 700779]
gi|321141289|gb|EFX36787.1| thymidylate kinase [Streptococcus infantis ATCC 700779]
gi|385702046|gb|EIG39198.1| dTMP kinase [Streptococcus infantis ATCC 700779]
Length = 212
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS +L LE R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L A G +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALATGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI EK ER +R E L+ RKV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEKGLERIAANSDREVNRLDLEGLDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA + V + K+++ D++
Sbjct: 179 KEGERIVKIDASLPLNQVVENTKQVLFDRM 208
>gi|373457366|ref|ZP_09549133.1| Thymidylate kinase [Caldithrix abyssi DSM 13497]
gi|371719030|gb|EHO40801.1| Thymidylate kinase [Caldithrix abyssi DSM 13497]
Length = 211
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD--D 114
+ EGLD GK++Q L YL G+ V R P TT + + I L +++H++ D
Sbjct: 6 FISFEGLDYSGKSTQIRLLEKYLTDRGYQVFTIREPGGTT-ISEKIRDILLDKTHINMTD 64
Query: 115 HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC----KAP 168
L+SA R + + + L+ ++ DRY S A+ +G+D+ +A
Sbjct: 65 RCELFLYSAARVQLVKEKIIPLLQKDYFILADRYVDSTTAYQGFGRGLDLNMVEQINQAA 124
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCYQMLRDSS---W 220
G+L P + YL PE+ A R G + LE F RKV Q Y++L + + +
Sbjct: 125 TFGIL-PGTTFYLRFAPEQIARRMQKSGRESDRLESAGNAFYRKVFQGYEILAEKNKDRF 183
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTACKKGKP 252
+IDA SIE Q+ IV+ + GKP
Sbjct: 184 CVIDANLSIE----QIHHIVVKNLIQRTTGKP 211
>gi|283481645|emb|CAZ69761.1| putative thymidylate kinase [Emiliania huxleyi virus 99B1]
Length = 327
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS---- 107
+ RG + V+EG D CGK +Q + L LE + V+ FP+ G +I L+
Sbjct: 103 ERRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHG 162
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------G 159
+ +LD L++ NRW + ++ + G +I+DRY S +A A
Sbjct: 163 DIKNLDPFLFASLYAQNRWSVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY 212
E + +GL + ++YLD+PPE K R LE++ V + Y
Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVARTAMDKDTTRAALDQNELAPLEYKNNVRKIY 282
Query: 213 QMLRDSSWKIIDACQSIED 231
+++ + D + ++D
Sbjct: 283 LEQKNTLRRTYDVVKCMDD 301
>gi|376259537|ref|YP_005146257.1| thymidylate kinase [Clostridium sp. BNL1100]
gi|373943531|gb|AEY64452.1| thymidylate kinase [Clostridium sp. BNL1100]
Length = 206
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + +EG D GKT+Q + +L+ G +V L R P T + +MI + + ++D
Sbjct: 3 KGLFITVEGTDGSGKTTQIKLMEEFLKAAGINVVLSREPG-GTEISEMIRNLILDPRNID 61
Query: 114 DHTIH--LLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW---CK 166
+ +L++A R + ++ L++G +I DR+ S A+ +G+D++
Sbjct: 62 ISPLTELMLYAAARAQHVFQVIRPALESGKYVICDRFVDSSYAYQGCGRGVDLKTVADVN 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQ---MLRDSS 219
+ + PD +LDI P A ER G +R E ++F +V + Y+ +L
Sbjct: 122 RAAVDGVVPDITFFLDIDPRLAIERRIKSTGADRIEQEKMDFHIRVYEGYRKMSLLYPDR 181
Query: 220 WKIIDACQSIEDVEKQLK 237
K IDA +SIE++ Q+K
Sbjct: 182 IKTIDASKSIEEISSQIK 199
>gi|284044447|ref|YP_003394787.1| thymidylate kinase [Conexibacter woesei DSM 14684]
gi|283948668|gb|ADB51412.1| thymidylate kinase [Conexibacter woesei DSM 14684]
Length = 210
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLG-HSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG VV+EGLD G T+Q RL + L G H+VEL + P +G ++ + +
Sbjct: 4 ARGRFVVVEGLDGAGTTTQAERLAAMLRTRGGHAVELTKEP-TNGPLGAVLRQAIEGRVA 62
Query: 112 LDDHTIHLLFSANR----WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
LD + L F+A+R + + + A L AG ++ DRY S +A++ + EW
Sbjct: 63 LDPVALALAFAADRADHLFNPVNGVVAALDAGRWVVSDRYVLSSLAYNRGGVVSREWVAE 122
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGG 193
+APD +++D+ PE ER G
Sbjct: 123 LNARAIAPDLTVFVDVDPEICLERIG 148
>gi|303398720|emb|CBW46701.1| A240L [African swine fever virus Georgia 2007/1]
Length = 236
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++ GK++Q +L LE + ++ FP+ T+ G +I L+ +
Sbjct: 2 RGILIAIEGINGVGKSTQAMKLKETLECMDYNAICIHFPNPDTTTGDLILQVLNKTIEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ +R E + + LK +IVDRY +SG+ ++ A GI IE
Sbjct: 62 SEQLHKLFTKHRSEFIAEIAVLLKLNYIVIVDRYIWSGLVYAQADGITIETKNT-----F 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>gi|390933755|ref|YP_006391260.1| thymidylate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569256|gb|AFK85661.1| Thymidylate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 205
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMI-SAYLSNQSHL 112
+G L+ EG+D GKT+Q + L YL +G + + R P T++G+ I L ++++
Sbjct: 3 KGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPG-GTAIGEKIREILLDKKNNI 61
Query: 113 DDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK---A 167
LL++A+R E + ++ L G +I+DR+ S + + A+G+ +E + +
Sbjct: 62 VPSAEALLYAASRAELVKEVIIPSLNDGKIVILDRFVDSSIVYQGYARGLGVEVVEEINS 121
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQML---RDSSW 220
+ L PD +YLDI P+ R ++ E ++F KV + Y L R +
Sbjct: 122 IAVDGLVPDLTVYLDIKPKDTLMRIDRRKDKDRLEIEDVQFHEKVYEGYMNLIKSRPGRY 181
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTAC 247
I+DA I ++K ++D+V+
Sbjct: 182 FIVDATHDIYHIQKA----IIDEVSKI 204
>gi|323701668|ref|ZP_08113340.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
gi|323533441|gb|EGB23308.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
Length = 215
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD- 113
G +V EG+D GKT+Q S L YL + R P T +G+ I L N +D
Sbjct: 11 GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPG-GTPLGEKIRELLLNPDFIDM 69
Query: 114 -DHTIHLLFSANRWEKRSM-MEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW-CKAPE 169
T LL++A R + + + +L+ GT ++ DRY S +A+ +G+DI++ K +
Sbjct: 70 QSRTEALLYAAARAQLVAQEIRPRLQQGTVVLCDRYIDSSLAYQGYGRGMDIDFLIKINQ 129
Query: 170 IGL--LAPDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQML---RDSSW 220
+G L P V+ LD+PPE+ R G +R E+ L+F R+V Y L +
Sbjct: 130 LGTGGLNPQLVILLDLPPEEGLIRSRKVGPADRLENEALDFHRRVRAGYLELARKNPDRY 189
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTA 246
++DA +SI+ + +++ +V V A
Sbjct: 190 LVLDARESIQTLHQEICRVVGGMVGA 215
>gi|326389200|ref|ZP_08210768.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
gi|325994563|gb|EGD52987.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
Length = 203
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 19/202 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG + EG+D CGKT+Q L YL G+++ + R P T VG+ + L ++++ +
Sbjct: 2 RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPG-GTKVGEKVRDILLDKNNFI 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K L+ G +I+DR+ S + A+G+ IE K
Sbjct: 61 SPVTEMLLYASSRAQ---LVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKL 117
Query: 167 APEIGLLA--PDSVLYLDIPPEKAAE-RGGYGGERYEHLE--FQRKVAQCY-QMLRD--S 218
EI + PD +Y+DI PE+A + RG +R E F +KV + Y +++++
Sbjct: 118 VNEIATMGILPDVTIYIDITPEEAMKRRGKREADRLEKESWGFHKKVREGYIKLVKEFPK 177
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
+ ID Q + V + + ++V
Sbjct: 178 RFVFIDGMQELMKVHQDIIDVV 199
>gi|313113917|ref|ZP_07799475.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623756|gb|EFQ07153.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 35/225 (15%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--S 110
S+G L+VLEGLD GK +Q L ++L+ G SV FP+ + ++ YL+ Q
Sbjct: 2 SKGKLIVLEGLDGSGKATQAKLLAAHLKEQGFSVREITFPNYESDSSALVKMYLAGQFGQ 61
Query: 111 HLDD---HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW-- 164
H DD + ++ +R+ + + + G +I DRY+ S +K +W
Sbjct: 62 HPDDVNAYAASSFYAVDRYASYKKDWGSFYENGGIIIADRYTTSNAVHQCSKLPPEQWES 121
Query: 165 -------CKAPEIGLLAPDSVLYLDIPP---EKAAERGGYGGER--------YEHLEFQR 206
+ +GL APD V+YL + P +K + +G E E+L R
Sbjct: 122 FLGWLFDFEFHLLGLPAPDEVIYLQVDPAVSQKLMTQRYHGDESRKDVHEKDTEYLARSR 181
Query: 207 KVAQ-CYQMLRDSSWKII-----DACQSIEDVEKQLKEIVLDQVT 245
A+ C L W ++ D +SIED++ +++EIVL Q+T
Sbjct: 182 CAAEYCAAHL---GWAVVHCTSGDNMRSIEDIQAEVQEIVLKQLT 223
>gi|291298371|ref|YP_003509649.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
gi|290567591|gb|ADD40556.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
Length = 707
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G VV EG + GK++Q +L ++L GH V L R P T +G I L + +
Sbjct: 469 GTFVVFEGGEGSGKSTQAVKLAAWLRQRGHEVVLTREPG-ATELGVRIRTLLLDPESGTS 527
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSA----KGIDIEWCK 166
T LL++A+R + S ++ L G +I DRY S +A+ + ++ W
Sbjct: 528 PSPRTEALLYAADRAQHVSKVVRPALDRGAVVISDRYVDSSLAYQGSGRELPADEVAWLS 587
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERG--GYGGERYEH--LEFQRKVAQCYQMLR--DSS- 219
G L PD V+ LDI P R G G+R E L F V + ++ L DSS
Sbjct: 588 HWATGGLKPDLVVLLDIDPRVGLVRATKGSAGDRLEQEALTFHEAVREKFRDLAADDSSR 647
Query: 220 WKIIDACQSIEDVEKQLKEIV 240
+ ++DA QS ED+ ++ E V
Sbjct: 648 YLVVDATQSPEDIAAKVSERV 668
>gi|417848515|ref|ZP_12494458.1| dTMP kinase [Streptococcus mitis SK1073]
gi|339452549|gb|EGP65175.1| dTMP kinase [Streptococcus mitis SK1073]
Length = 212
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEKKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +++DR+ S VA+ +G+D I+
Sbjct: 61 QMDSKTELLLYIASR--RQHLVEKVLPALEAGKLVVMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y + D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSILD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|15902879|ref|NP_358429.1| thymidylate kinase [Streptococcus pneumoniae R6]
gi|116516561|ref|YP_816308.1| thymidylate kinase [Streptococcus pneumoniae D39]
gi|421265959|ref|ZP_15716842.1| thymidylate kinase [Streptococcus pneumoniae SPAR27]
gi|421298401|ref|ZP_15749089.1| thymidylate kinase [Streptococcus pneumoniae GA60080]
gi|421307204|ref|ZP_15757849.1| thymidylate kinase [Streptococcus pneumoniae GA60132]
gi|46576561|sp|Q8DQ58.1|KTHY_STRR6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|122278806|sp|Q04KZ0.1|KTHY_STRP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|15458437|gb|AAK99639.1| Thymidylate kinase [Streptococcus pneumoniae R6]
gi|116077137|gb|ABJ54857.1| thymidylate kinase [Streptococcus pneumoniae D39]
gi|395868695|gb|EJG79812.1| thymidylate kinase [Streptococcus pneumoniae SPAR27]
gi|395902357|gb|EJH13290.1| thymidylate kinase [Streptococcus pneumoniae GA60080]
gi|395908305|gb|EJH19187.1| thymidylate kinase [Streptococcus pneumoniae GA60132]
Length = 212
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK 212
>gi|331005272|ref|ZP_08328664.1| Thymidylate kinase [gamma proteobacterium IMCC1989]
gi|330420949|gb|EGG95223.1| Thymidylate kinase [gamma proteobacterium IMCC1989]
Length = 211
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
D+RG + +EG + GK++ + + SYL G V R P T + L N+
Sbjct: 5 DTRGKFLTIEGTEGVGKSTNIAYIQSYLTSQGIEVLTTREPGGTPLAEDIRELLLQNRDE 64
Query: 112 LDDHTIHLL--FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGID---IEWC 165
D T LL F+A ++++ L+ G ++ DR++ + A+ +G+D IE
Sbjct: 65 KMDETAELLLVFAARAQHLQTVILPALERGQWVLCDRFTDATYAYQGGGRGLDLALIEML 124
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQMLRDSS-- 219
+ G + PD L LDI ER G GE +EH+ F KV Y + R ++
Sbjct: 125 EQRIQGDIRPDLTLLLDIDVTIGLERAGRRGELDRFEHEHVAFFEKVRHAY-LARAATFP 183
Query: 220 --WKIIDACQSIEDVEKQLKE 238
+ ++DA QS+E V+ Q+++
Sbjct: 184 ERYGVVDASQSLEQVQLQVRD 204
>gi|258510140|ref|YP_003183574.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476866|gb|ACV57185.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 213
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
+G L+ EG+D GKT+Q RL ++LE G V + R P T +G + A L + H
Sbjct: 3 KGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPG-GTRIGDAVRAILLDPRHQE 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPE 169
+ T LL++A+R + ++ L G ++ DR+ + +A+ A G+ W +A
Sbjct: 62 MAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEALN 121
Query: 170 ---IGLLAPDSVLYLDI--PPEKAAERG---GYGGERYEHLE--FQRKVAQCYQMLRDSS 219
+G L PD L+ D+ P ++ R G G +R E + F +VA ++ L ++
Sbjct: 122 EYALGGLRPDLTLWFDLDWPTARSRLRARAEGGGLDRIERRDEAFFERVADAFERLWRAA 181
Query: 220 WKI---IDACQSIEDVEKQLKEIVLDQV 244
++ IDA +S +D+E++++ +V + +
Sbjct: 182 PEVRKRIDAARSPDDIEQEIRALVWNLI 209
>gi|110669030|ref|YP_658841.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790]
Length = 213
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTS-VGQMISAYLSNQSHLDDH 115
L+ LEGLD GK++ C L S L V R P T S G +++ + + S D
Sbjct: 14 LITLEGLDGSGKSTVCESLQSALP----EVTFTREP--TDSWYGDLVTESMHDDS-ADSL 66
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID------IEWCKA- 167
LF+A+ ++ L +GT +I DRY+ S A+ +A D +E+ ++
Sbjct: 67 AELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLEYIQSI 126
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIID 224
E PD+ +YLDI PE R G ++E +++ +VA Y+ + + + +D
Sbjct: 127 HEPFSRRPDATVYLDIDPETGVTRAG-ATNKFERVQYLERVATQYERVIAAEPTRFYRVD 185
Query: 225 ACQSIEDVEKQLKEIV 240
A QSI DV+K++K IV
Sbjct: 186 ASQSIADVKKRVKTIV 201
>gi|118498162|ref|YP_899212.1| thymidylate kinase [Francisella novicida U112]
gi|194324335|ref|ZP_03058108.1| thymidylate kinase [Francisella novicida FTE]
gi|254373508|ref|ZP_04988995.1| thymidylate kinase [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374970|ref|ZP_04990450.1| thymidylate kinase [Francisella novicida GA99-3548]
gi|385793565|ref|YP_005826541.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|166221743|sp|A0Q893.1|KTHY_FRATN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|118424068|gb|ABK90458.1| thymidylate kinase [Francisella novicida U112]
gi|151571233|gb|EDN36887.1| thymidylate kinase [Francisella novicida GA99-3549]
gi|151572688|gb|EDN38342.1| thymidylate kinase [Francisella novicida GA99-3548]
gi|194321400|gb|EDX18885.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE]
gi|332678890|gb|AEE88019.1| Thymidylate kinase [Francisella cf. novicida Fx1]
Length = 209
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ S + YLE + R P T ++ + L N+ D
Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKY---DEE 61
Query: 117 IH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
IH L+ A R + R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 62 IHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALN 121
Query: 170 IGLL---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWK 221
L PD V+YLDI P +R G +R E LEF + ++ +++DS
Sbjct: 122 DNFLNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRTRNVFKDLVKDSDNA 181
Query: 222 I-IDACQSIEDVEKQLKEIVLDQ 243
I IDA +SI++VEKQ+ ++LD+
Sbjct: 182 IEIDAAKSIQEVEKQIY-LILDK 203
>gi|419781550|ref|ZP_14307369.1| dTMP kinase [Streptococcus oralis SK100]
gi|383184150|gb|EIC76677.1| dTMP kinase [Streptococcus oralis SK100]
Length = 212
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVEITKAVLFDRMGLAK 212
>gi|347481986|gb|AEO97972.1| thymidylate kinase [Emiliania huxleyi virus 84]
Length = 327
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS---- 107
+ RG + V+EG D CGK +Q + L LE + V+ FP+ G +I L+
Sbjct: 103 ERRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHG 162
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------G 159
+ +LD L++ NRW + ++ + G +I+DRY S +A A
Sbjct: 163 DIKNLDPFLFASLYAQNRWSVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY 212
E + +GL + ++YLD+PPE K R LE++ V + Y
Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVARTAMDKDTTRAALDQNELAPLEYKNNVRKIY 282
Query: 213 QMLRDSSWKIIDACQSIED 231
+++ + D + ++D
Sbjct: 283 LEQKNTLRRTYDIVKCMDD 301
>gi|339252100|ref|XP_003371273.1| thymidylate kinase [Trichinella spiralis]
gi|316968511|gb|EFV52782.1| thymidylate kinase [Trichinella spiralis]
Length = 118
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 139 GTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER 198
G ++ + SG + +G+D +WC + GL PD V ++D+ PE RG +G ER
Sbjct: 6 GALIVFEGLDRSG---KTTQGLDFDWCMNADRGLPQPDVVFFVDVKPETLKNRGEFGVER 62
Query: 199 YEHLEFQRKVAQCYQMLRDSSWKI 222
++ EFQRKV YQ L D W+I
Sbjct: 63 FDDEEFQRKVRHNYQRLTDKYWQI 86
>gi|333922277|ref|YP_004495857.1| thymidylate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747838|gb|AEF92945.1| Thymidylate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 207
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD- 113
G +V EG+D GKT+Q S L YL + R P T +G+ I L N +D
Sbjct: 3 GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPG-GTPLGEKIRELLLNPDFIDM 61
Query: 114 -DHTIHLLFSANRWEKRSM-MEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW-CKAPE 169
T LL++A R + + + +L+ GT ++ DRY S +A+ +G+DI++ K +
Sbjct: 62 QSRTEALLYAAARAQLVAQEIRPRLQQGTVVLCDRYIDSSLAYQGYGRGMDIDFLIKINQ 121
Query: 170 IGL--LAPDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQML---RDSSW 220
+G L P V+ LD+PPE+ R G +R E+ L+F R+V Y L +
Sbjct: 122 LGTGGLNPQLVILLDLPPEEGLIRSRKVGPADRLENEALDFHRRVRAGYLELARKNPDRY 181
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTA 246
++DA +SI+ + +++ +V V A
Sbjct: 182 LVLDARESIQTLHQEICRVVGGMVGA 207
>gi|168494363|ref|ZP_02718506.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06]
gi|221231705|ref|YP_002510857.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669]
gi|415698137|ref|ZP_11457048.1| thymidylate kinase [Streptococcus pneumoniae 459-5]
gi|415749334|ref|ZP_11477278.1| thymidylate kinase [Streptococcus pneumoniae SV35]
gi|415752018|ref|ZP_11479129.1| thymidylate kinase [Streptococcus pneumoniae SV36]
gi|418073716|ref|ZP_12710974.1| thymidylate kinase [Streptococcus pneumoniae GA11184]
gi|418078424|ref|ZP_12715647.1| thymidylate kinase [Streptococcus pneumoniae 4027-06]
gi|418080389|ref|ZP_12717601.1| thymidylate kinase [Streptococcus pneumoniae 6735-05]
gi|418089326|ref|ZP_12726483.1| thymidylate kinase [Streptococcus pneumoniae GA43265]
gi|418098303|ref|ZP_12735402.1| thymidylate kinase [Streptococcus pneumoniae 6901-05]
gi|418104990|ref|ZP_12742050.1| thymidylate kinase [Streptococcus pneumoniae GA44500]
gi|418114430|ref|ZP_12751420.1| thymidylate kinase [Streptococcus pneumoniae 5787-06]
gi|418116670|ref|ZP_12753642.1| thymidylate kinase [Streptococcus pneumoniae 6963-05]
gi|418123204|ref|ZP_12760138.1| thymidylate kinase [Streptococcus pneumoniae GA44378]
gi|418127791|ref|ZP_12764687.1| thymidylate kinase [Streptococcus pneumoniae NP170]
gi|418134994|ref|ZP_12771851.1| thymidylate kinase [Streptococcus pneumoniae GA11426]
gi|418136965|ref|ZP_12773807.1| thymidylate kinase [Streptococcus pneumoniae GA11663]
gi|418146155|ref|ZP_12782937.1| thymidylate kinase [Streptococcus pneumoniae GA13637]
gi|418173303|ref|ZP_12809917.1| thymidylate kinase [Streptococcus pneumoniae GA41277]
gi|418177963|ref|ZP_12814547.1| thymidylate kinase [Streptococcus pneumoniae GA41565]
gi|418216381|ref|ZP_12843105.1| thymidylate kinase [Streptococcus pneumoniae Netherlands15B-37]
gi|419431327|ref|ZP_13971473.1| thymidylate kinase [Streptococcus pneumoniae EU-NP05]
gi|419433607|ref|ZP_13973725.1| thymidylate kinase [Streptococcus pneumoniae GA40183]
gi|419440150|ref|ZP_13980202.1| thymidylate kinase [Streptococcus pneumoniae GA40410]
gi|419464015|ref|ZP_14003908.1| thymidylate kinase [Streptococcus pneumoniae GA04175]
gi|419468800|ref|ZP_14008671.1| thymidylate kinase [Streptococcus pneumoniae GA06083]
gi|419472995|ref|ZP_14012846.1| thymidylate kinase [Streptococcus pneumoniae GA13430]
gi|419497114|ref|ZP_14036825.1| thymidylate kinase [Streptococcus pneumoniae GA47522]
gi|419534395|ref|ZP_14073898.1| thymidylate kinase [Streptococcus pneumoniae GA17457]
gi|421217453|ref|ZP_15674354.1| thymidylate kinase [Streptococcus pneumoniae 2070335]
gi|421280920|ref|ZP_15731718.1| thymidylate kinase [Streptococcus pneumoniae GA04672]
gi|421309370|ref|ZP_15759997.1| thymidylate kinase [Streptococcus pneumoniae GA62681]
gi|254808307|sp|B8ZP37.1|KTHY_STRPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|183575667|gb|EDT96195.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06]
gi|220674165|emb|CAR68688.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669]
gi|353747615|gb|EHD28271.1| thymidylate kinase [Streptococcus pneumoniae 4027-06]
gi|353750563|gb|EHD31201.1| thymidylate kinase [Streptococcus pneumoniae GA11184]
gi|353752929|gb|EHD33553.1| thymidylate kinase [Streptococcus pneumoniae 6735-05]
gi|353762012|gb|EHD42575.1| thymidylate kinase [Streptococcus pneumoniae GA43265]
gi|353769663|gb|EHD50179.1| thymidylate kinase [Streptococcus pneumoniae 6901-05]
gi|353779424|gb|EHD59890.1| thymidylate kinase [Streptococcus pneumoniae GA44500]
gi|353787172|gb|EHD67579.1| thymidylate kinase [Streptococcus pneumoniae 5787-06]
gi|353789892|gb|EHD70281.1| thymidylate kinase [Streptococcus pneumoniae 6963-05]
gi|353797291|gb|EHD77626.1| thymidylate kinase [Streptococcus pneumoniae GA44378]
gi|353800252|gb|EHD80566.1| thymidylate kinase [Streptococcus pneumoniae NP170]
gi|353814951|gb|EHD95173.1| thymidylate kinase [Streptococcus pneumoniae GA13637]
gi|353840002|gb|EHE20076.1| thymidylate kinase [Streptococcus pneumoniae GA41277]
gi|353844737|gb|EHE24780.1| thymidylate kinase [Streptococcus pneumoniae GA41565]
gi|353873432|gb|EHE53293.1| thymidylate kinase [Streptococcus pneumoniae Netherlands15B-37]
gi|353901592|gb|EHE77124.1| thymidylate kinase [Streptococcus pneumoniae GA11663]
gi|353902231|gb|EHE77761.1| thymidylate kinase [Streptococcus pneumoniae GA11426]
gi|379539234|gb|EHZ04413.1| thymidylate kinase [Streptococcus pneumoniae GA04175]
gi|379546903|gb|EHZ12041.1| thymidylate kinase [Streptococcus pneumoniae GA06083]
gi|379552502|gb|EHZ17591.1| thymidylate kinase [Streptococcus pneumoniae GA13430]
gi|379565129|gb|EHZ30122.1| thymidylate kinase [Streptococcus pneumoniae GA17457]
gi|379576608|gb|EHZ41532.1| thymidylate kinase [Streptococcus pneumoniae GA40183]
gi|379579917|gb|EHZ44813.1| thymidylate kinase [Streptococcus pneumoniae GA40410]
gi|379601628|gb|EHZ66401.1| thymidylate kinase [Streptococcus pneumoniae GA47522]
gi|379632571|gb|EHZ97147.1| thymidylate kinase [Streptococcus pneumoniae EU-NP05]
gi|381309714|gb|EIC50547.1| thymidylate kinase [Streptococcus pneumoniae SV36]
gi|381317142|gb|EIC57872.1| thymidylate kinase [Streptococcus pneumoniae 459-5]
gi|381317628|gb|EIC58353.1| thymidylate kinase [Streptococcus pneumoniae SV35]
gi|395584939|gb|EJG45331.1| thymidylate kinase [Streptococcus pneumoniae 2070335]
gi|395882081|gb|EJG93128.1| thymidylate kinase [Streptococcus pneumoniae GA04672]
gi|395910791|gb|EJH21660.1| thymidylate kinase [Streptococcus pneumoniae GA62681]
Length = 212
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL L+ G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILKEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
>gi|389580120|ref|ZP_10170147.1| thymidylate kinase [Desulfobacter postgatei 2ac9]
gi|389401755|gb|EIM63977.1| thymidylate kinase [Desulfobacter postgatei 2ac9]
Length = 209
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT------SVGQMISAYL 106
++G VV EG+D GKT+Q L L G FP TT VG++I L
Sbjct: 5 NKGRFVVFEGIDGSGKTTQVELLCKRLASTG-------FPIYTTCEPTDGPVGRLIRRML 57
Query: 107 SNQSHLDDHTIHLLFSANRWEKRSMMEAKLK----AGTTLIVDRYSYSGVAFSSAKGIDI 162
S D TI LF+A+R E E ++ GT ++ DRY +S A+ S + +D+
Sbjct: 58 SGTLPADQRTIASLFAADRTEHLMDPETGIRQMVDTGTIVVCDRYYFSSYAYHS-QYMDM 116
Query: 163 EWC-KAPEIG--LLAPDSVLYLDIPPE---KAAERGGYGGERYEHLEFQRKVAQCY---- 212
EW +A + +L PD L++D+ P+ K + E YE ++ ++V Y
Sbjct: 117 EWVIQANRLNADILKPDITLFIDVDPQICLKRLQTTRKHLEIYEKIDIMKQVRANYLAAF 176
Query: 213 -QMLRDSSWKIIDACQSIEDVEKQLKEIV 240
++ +ID S++++ K + E V
Sbjct: 177 KRLAHQEHVVVIDGNNSVDNIAKAVWEQV 205
>gi|268611868|ref|ZP_06145595.1| putative thymidylate kinase [Ruminococcus flavefaciens FD-1]
Length = 224
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-----SN 108
+G L+V+EGLD GK +Q + L L+ LG + + FPD + ++ YL N
Sbjct: 2 KGKLIVIEGLDGSGKATQTALLCEKLKTLGVEFDHFSFPDYNSESSLLVRMYLDGKFGDN 61
Query: 109 QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW--- 164
+ ++ + F+ +R+ R+ + K + G ++ DRY+ S +K D EW
Sbjct: 62 AAEVNPYAASCFFACDRYASFRTQWQDKYEGGHIIVCDRYTTSNAVHQCSKLPDGEWDDF 121
Query: 165 ------CKAPEIGLLAPDSVLYLDIPPEKAAE 190
+ +IGL PD+V+YL + PE E
Sbjct: 122 VNWLFDFEYRKIGLPEPDAVIYLRVDPEIGQE 153
>gi|421488642|ref|ZP_15936030.1| dTMP kinase [Streptococcus oralis SK304]
gi|400367859|gb|EJP20874.1| dTMP kinase [Streptococcus oralis SK304]
Length = 212
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DI+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIN 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLG 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVDTTKAVLFDRMGLAK 212
>gi|417938309|ref|ZP_12581607.1| dTMP kinase [Streptococcus infantis SK970]
gi|343391399|gb|EGV03974.1| dTMP kinase [Streptococcus infantis SK970]
Length = 212
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS +L LE R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI EK ER R E ++ RKV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEKGLERIAANSNREVNRLDLEGIDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA ++ V + K+++ D++
Sbjct: 179 KEGERIVKIDASLPLDQVVENTKQVLFDRM 208
>gi|347601394|gb|AEP15879.1| thymidylate kinase, partial [Emiliania huxleyi virus 208]
Length = 289
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS---- 107
+ RG + V+EG D CGK +Q + L LE + V+ FP+ G +I L+
Sbjct: 77 ERRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHG 136
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------G 159
+ +LD L++ NRW + ++ + G +I+DRY S +A A
Sbjct: 137 DIKNLDPFLFASLYAQNRWSVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 196
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY 212
E + +GL + ++YLD+PPE K R LE++ V + Y
Sbjct: 197 KQTELFENEILGLPRANHIIYLDLPPEVARTAMDKDTTRAALDQNELAPLEYKNNVRKIY 256
Query: 213 QMLRDSSWKIIDACQSIED 231
+++ + D + ++D
Sbjct: 257 LEQKNTLRRTYDIVKCMDD 275
>gi|254388750|ref|ZP_05003983.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC
27064]
gi|197702470|gb|EDY48282.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC
27064]
Length = 747
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 23/246 (9%)
Query: 5 CSFTLSKALNFGALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGNIDSR-----GALVV 59
+FTL A GAL + + L + P R + +LR G ++ G +
Sbjct: 100 AAFTLMLA---GALLLPVAAVVLARTDDRAGVPLRRDLGEALRGGADPAQAPAATGFFIA 156
Query: 60 LEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSHLDDHTI 117
LEG D GK++Q L +++ GH V + R P T VG+ + + L + + L +
Sbjct: 157 LEGGDGAGKSTQAEALATWIRNKGHEVVVTREPG-ATPVGKRLRSILLDVASAGLSNRAE 215
Query: 118 HLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL---- 172
LL++A+R E S++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 216 ALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGA-GRDLSPTEIARISRWATD 274
Query: 173 -LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQML---RDSSWKIIDAC 226
L P + LD+ PE A ER +R E EF R+V + L + + ++DA
Sbjct: 275 GLVPHLTVLLDVSPETARERFTEAPDRLESEPAEFHRRVRSGFLTLAAGDPARYLVVDAG 334
Query: 227 QSIEDV 232
Q E V
Sbjct: 335 QEPEAV 340
>gi|403212961|emb|CAJ53245.2| thymidylate kinase [Haloquadratum walsbyi DSM 16790]
Length = 203
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTS-VGQMISAYLSNQSHLDDH 115
L+ LEGLD GK++ C L S L V R P T S G +++ + + S D
Sbjct: 4 LITLEGLDGSGKSTVCESLQSALP----EVTFTREP--TDSWYGDLVTESMHDDS-ADSL 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID------IEWCKA- 167
LF+A+ ++ L +GT +I DRY+ S A+ +A D +E+ ++
Sbjct: 57 AELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLEYIQSI 116
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIID 224
E PD+ +YLDI PE R G ++E +++ +VA Y+ + + + +D
Sbjct: 117 HEPFSRRPDATVYLDIDPETGVTRAG-ATNKFERVQYLERVATQYERVIAAEPTRFYRVD 175
Query: 225 ACQSIEDVEKQLKEIV 240
A QSI DV+K++K IV
Sbjct: 176 ASQSIADVKKRVKTIV 191
>gi|270292959|ref|ZP_06199170.1| dTMP kinase [Streptococcus sp. M143]
gi|270278938|gb|EFA24784.1| dTMP kinase [Streptococcus sp. M143]
Length = 212
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V K ++ D++ +
Sbjct: 179 KEGNRIVKIDASLPLEQVVDATKAVLFDRMGLTR 212
>gi|401683408|ref|ZP_10815294.1| dTMP kinase [Streptococcus sp. BS35b]
gi|418974724|ref|ZP_13522633.1| dTMP kinase [Streptococcus oralis SK1074]
gi|383348095|gb|EID26054.1| dTMP kinase [Streptococcus oralis SK1074]
gi|400187486|gb|EJO21680.1| dTMP kinase [Streptococcus sp. BS35b]
Length = 212
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S +A+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFVTDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|251771718|gb|EES52293.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum]
Length = 252
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+V EG+D GK++Q RL + L+GL H L + P T + ++ L L
Sbjct: 39 GCLIVFEGMDGSGKSTQARRLKARLDGLSHPAVLTKEPGGTPAGARLREILLDPALPLAP 98
Query: 115 HTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE--- 169
LF A+R ++++ +L+AG T++ DR S++ VA+ S G+ E
Sbjct: 99 EAELFLFEADRAMHVKTLLLPELRAGRTVLSDRLSFATVAYQSFGGGLSRELVSTLNEVA 158
Query: 170 IGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHL--EFQRKVAQCY-QMLRDSSWK-- 221
+G + PD LD+P + A R G G R+E L ++ +V + Y ++ R +
Sbjct: 159 LGGVVPDVTYLLDLPVSEMARRLRERGDGPTRFELLGGDYFERVREGYLELARIHRGRTV 218
Query: 222 IIDACQSIEDVEKQLKE 238
++DA + E +E ++ E
Sbjct: 219 VLDATRDPETLEGEIFE 235
>gi|406983527|gb|EKE04709.1| Thymidylate kinase [uncultured bacterium]
Length = 205
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 10/200 (5%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+D RG + EG+D GK++Q +++ +L+ + R P T ++ + L+ +
Sbjct: 1 MDKRGLFITFEGIDGSGKSTQLNKVAEFLKEKNIDCIITRDPGGTDLGSKLRNILLNYEG 60
Query: 111 HLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+ L+ A+R + + L +GT ++ DRY S +A+ A+G++IE +
Sbjct: 61 KIYPLCELFLYLADRAQHVDEKIIPALNSGTVVLCDRYIDSTIAYQGYARGLNIEELVSL 120
Query: 169 E---IGLLAPDSVLYLDIPPEKAAERGGYGGERY--EHLEFQRKVAQCYQML---RDSSW 220
L PD L DI PE + +R G +R E + F +KV + Y L S
Sbjct: 121 NNFATHTLWPDLTLIFDINPEISLKRVGDNKDRLESESINFHKKVREGYLELAKQHPSRI 180
Query: 221 KIIDACQSIEDVEKQLKEIV 240
KII++ QSIED+ K + +I+
Sbjct: 181 KIINSNQSIEDIYKDVMQII 200
>gi|257457560|ref|ZP_05622727.1| thymidylate kinase [Treponema vincentii ATCC 35580]
gi|257444946|gb|EEV20022.1| thymidylate kinase [Treponema vincentii ATCC 35580]
Length = 209
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 57 LVVLEGLDRCGKTSQCSRLLS---YLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
VV EGLD G TSQ RLL GL +V P S+G++I LS + D
Sbjct: 6 FVVFEGLDGTGTTSQL-RLLREAFTTRGLQDTVYFTCEPT-GDSIGKLIREALSGAAGFD 63
Query: 114 DHTIHLLFSANRWEK---RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI--EWCKAP 168
TI LF A+R E +S + +L+AG + DRY +S +A+ +G+D E +
Sbjct: 64 AKTIAYLFGADRCEHVYGKSGILTQLQAGKAVFSDRYLFSSLAY---QGLDAGKELAQTI 120
Query: 169 EIGLLAPDSVLYLDIPPEKAA---ERGGYGGERYEHLEFQRKVAQCYQML--------RD 217
P+ + + D+P A E+ E YE FQ+KVA YQ + D
Sbjct: 121 NAPFPLPEYLFFFDLPASTAMARIEKRNIPREIYEKETFQQKVAAEYQAIFRHYAETAPD 180
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
IDA ++IE++ + + IV
Sbjct: 181 MRILRIDASKTIEEIHENIWRIV 203
>gi|328951753|ref|YP_004369087.1| thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
gi|328452077|gb|AEB07906.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
Length = 217
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSHL 112
G L+ EG+D GKT+Q L L LG SV L R P T GQ I L Q
Sbjct: 10 GRLIAFEGVDGVGKTTQAHLLAQALSRLGLSVILTREPT-TGPWGQQIRQILLHGRQGLT 68
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID---IEWCK--- 166
+ L + R ++ L AG +I DRY +S +A+ A G+D I+ C
Sbjct: 69 PKAELELFIADRREHVAQVIRPALVAGKIVITDRYYFSSMAYQGALGLDPDRIQKCHETF 128
Query: 167 APEIGLLAPDSVLYLDIP----PEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
AP PD + L +P + +R G +E+L + KVAQ + LR +
Sbjct: 129 APR-----PDLAIILTLPLSEITARLQQRSGQKRSSFENLAYLTKVAQIFSRLRAPYLQH 183
Query: 223 IDACQSIEDVEKQLKEIVLDQVTACKK 249
+D +I V ++ +V + +K
Sbjct: 184 LDGQGTIAAVHARILTLVQPLLKPSRK 210
>gi|94266074|ref|ZP_01289792.1| Thymidylate kinase [delta proteobacterium MLMS-1]
gi|94267013|ref|ZP_01290658.1| Thymidylate kinase [delta proteobacterium MLMS-1]
gi|93452287|gb|EAT02928.1| Thymidylate kinase [delta proteobacterium MLMS-1]
gi|93453357|gb|EAT03788.1| Thymidylate kinase [delta proteobacterium MLMS-1]
Length = 218
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 40 MESSSSLRIGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVG 99
ME+SSS G + G L+ LEG+D GK++Q L L LG V + F G
Sbjct: 1 MENSSSRERGQ--AAGILIALEGIDGTGKSTQLKLLARRLRELGLEV-VTTFEPTDGPHG 57
Query: 100 QMISAYLSNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAK 158
+ + N++ L LF A+R + ++ L AG ++ DRY +S A+ A
Sbjct: 58 RYLRQMFKNRAQLPPKEELRLFIADRHDHVEQVIAPALAAGKVVLTDRYYFSTAAYQGAA 117
Query: 159 GIDIEWCKAP-EIGLLAPDSVLYLDIPP----EKAAERGGYGGERYEHLEFQRKVAQCYQ 213
G D A E PD VL L+ PP + E G +E ++ R+V +
Sbjct: 118 GHDPAAIIAENEQFAPRPDLVLLLEAPPAVGIARVRELRGESLNDFEQEDYLRRVTAIFA 177
Query: 214 MLRDSSWKIIDACQSIEDVEKQL 236
L DS + IDA ++ V+++L
Sbjct: 178 SLADSRIRRIDATGRLDQVQQRL 200
>gi|414158280|ref|ZP_11414574.1| thymidylate kinase [Streptococcus sp. F0441]
gi|410870825|gb|EKS18782.1| thymidylate kinase [Streptococcus sp. F0441]
Length = 212
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVMTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ +++ K
Sbjct: 179 REGNRIVKIDASLPLEQVVETTKAVLFERMGLAK 212
>gi|407979115|ref|ZP_11159937.1| thymidylate kinase [Bacillus sp. HYC-10]
gi|407414331|gb|EKF35984.1| thymidylate kinase [Bacillus sp. HYC-10]
Length = 212
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS-NQSHLD 113
G + EG + GKT+ ++ +E G++V R P Q+ L+ N + +D
Sbjct: 3 GMFITFEGPEGAGKTTVIRKVYEEMERQGYAVMATREPGGIDIAEQIREVILNENNTKMD 62
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE-- 169
T LL++A R + + +E L+ G T++ DR+ S +A+ A+G+ IE K+
Sbjct: 63 AKTEALLYAAARRQHLAEKVEPALQRGDTVLCDRFVDSSLAYQGYARGLGIEEVKSINEF 122
Query: 170 -IGLLAPDSVLYLDIPPEKAAER--GGYGGER----YEHLEFQRKVAQCYQMLRDSS--- 219
I P +Y I PE+ +R G E+ E L F ++V + Y++L S
Sbjct: 123 AINGTMPQMTIYFSITPEEGLKRINANQGREKNRLDLETLNFHQRVREGYELLIAQSPER 182
Query: 220 WKIIDACQSIEDVEKQLKEIVLD 242
++++DA + I+DV +++ +++ D
Sbjct: 183 FRVVDASRPIQDVFEEVLQLIQD 205
>gi|359776537|ref|ZP_09279844.1| thymidylate kinase [Arthrobacter globiformis NBRC 12137]
gi|359306076|dbj|GAB13673.1| thymidylate kinase [Arthrobacter globiformis NBRC 12137]
Length = 215
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SN 108
+ S G + EG D GK++Q +RL LE G +V R P T +G+ + + +
Sbjct: 1 MQSPGLFIAFEGGDGAGKSTQAARLAGSLESRGLTVLRTREPG-GTPIGEKLRSLVLDHG 59
Query: 109 QSHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSA---------K 158
H+D HT L+F+A+R S ++ L G ++ DRY S VA+ A +
Sbjct: 60 HGHIDAHTEALIFAASRAAHASQVIRPALARGEVVLTDRYIDSSVAYQGAGRGLGTDAVR 119
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHL-----EFQRKVAQCYQ 213
G++ EW + L PD + LD+ P + R G + L EF ++ Q +
Sbjct: 120 GVN-EWATSG----LQPDLTVLLDVHPAEGRSRRTAGDAAEDRLESEADEFHARIRQAFL 174
Query: 214 ML---RDSSWKIIDACQSIEDV 232
L R S+ +++A Q +E++
Sbjct: 175 DLAAARPESYLVLEAGQPVEEI 196
>gi|345869623|ref|ZP_08821580.1| Thymidylate kinase [Thiorhodococcus drewsii AZ1]
gi|343923006|gb|EGV33703.1| Thymidylate kinase [Thiorhodococcus drewsii AZ1]
Length = 220
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N +RG + LEG++ GK++Q + L + L+ LG V R P + +M S L Q
Sbjct: 4 NSVTRGRFITLEGIEGAGKSTQIANLAALLQELGCRVVTTREPGGSPIAERMRSVLLDAQ 63
Query: 110 SHLDDHTIHLL--FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCK 166
+ + T LL F+A + L+ GT +I DR++ + A+ +G++
Sbjct: 64 NRGMNETAELLLMFAARAEHLEKTIRPALEVGTWVICDRFTDATYAYQGGGRGVNPGRIA 123
Query: 167 APEI---GLLAPDSVLYLDIPPE----KAAERGGYGGERY--EHLEF---QRKVAQCYQM 214
E G L PD L LD+PPE +A R G +R+ E L F R V
Sbjct: 124 TLETLVQGDLRPDLTLVLDLPPEMGLARARARNGGETDRFEAEDLAFFAAARAVYLARAK 183
Query: 215 LRDSSWKIIDACQSIEDVEKQLKEIV 240
++++DA +++V +Q++ +V
Sbjct: 184 AAPERYRVVDAAAHLDEVTRQVRSLV 209
>gi|297616259|ref|YP_003701418.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
gi|297144096|gb|ADI00853.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
Length = 223
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
R + EG+D GKT+Q L L +G SV R P +T + + I L + + D
Sbjct: 3 RKCFISFEGIDGAGKTTQVELLYRKLMDVGFSVVAVREPG-STPLSEKIRELLLDVRNQD 61
Query: 114 --DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE 169
L++A R + +++ L AG +I DRY S +A+ +G+DIE+ K
Sbjct: 62 ISSSAESFLYAAARSQLVAEIIKPALDAGKVVIADRYVDSTIAYQGYGRGMDIEFLKRLN 121
Query: 170 I---GLLAPDSVLYLDIPPEKA-AERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---W 220
+ G L P + LD+PPE+ A RG +R E + F R V + Y L S
Sbjct: 122 LLATGGLMPCLTILLDLPPEEGIARRGELPLDRLEREGIGFHRAVREGYLTLSRSEPDRI 181
Query: 221 KIIDACQSIEDVEKQLKEIVLDQV 244
++DA +EDV +Q+ + VL+++
Sbjct: 182 MVVDARLQVEDVHEQILKRVLERL 205
>gi|119719934|ref|YP_920429.1| dTMP kinase [Thermofilum pendens Hrk 5]
gi|119525054|gb|ABL78426.1| thymidylate kinase [Thermofilum pendens Hrk 5]
Length = 254
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 40 MESSSSLRIGNIDSR---GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT 96
+E+ G+ SR G V LEG+D GKT+Q + L L G V + R P
Sbjct: 36 LETEKRRIFGDNKSRVDGGLYVALEGIDGSGKTTQAAMLYEKLSAEGFQVVIVREPWVPA 95
Query: 97 SVGQMISAYLSNQSHLDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS 155
I +L LD LF+A+R +R ++ L+AG ++ DR ++ +A+
Sbjct: 96 -----IKEFLYKHD-LDVEAEVYLFAADRIILQREVVLPSLRAGKIVVSDRSVFASLAYQ 149
Query: 156 SAKGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLEFQRKVAQCYQ 213
S++G D ++ A + PD V+ LD+P E+A +R R+E + KV Y
Sbjct: 150 SSRGADQDFILAVNKSVRFPDVVVLLDLPVEEAMKRLSSRVAQTRFEDPGYMEKVRAKYL 209
Query: 214 MLRD---SSWKIIDACQSIEDVEKQ-LKEIV 240
L + + ++DA + E+V ++ L+EIV
Sbjct: 210 QLAEEYPEKFIVVDASKPPEEVNREILREIV 240
>gi|355575536|ref|ZP_09045006.1| thymidylate kinase [Olsenella sp. oral taxon 809 str. F0356]
gi|354817548|gb|EHF02053.1| thymidylate kinase [Olsenella sp. oral taxon 809 str. F0356]
Length = 239
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+ +RGA V LEG+D GK++Q + L +EG+G V R P T V + + + L + +
Sbjct: 14 VPARGAFVSLEGIDGSGKSTQAALLARLMEGVGLEVVSLREPG-GTQVSEKVRSILLDPA 72
Query: 111 H--LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGID---IE 163
+ + D LL+ A+R + R ++ L G ++ DRY S A+ +G+D +
Sbjct: 73 NDMMADECELLLYEASRAQLVRQVIVPALARGAVVLCDRYYDSTYAYQHGGRGLDEGLVR 132
Query: 164 WCKAPEIGL--LAPDSVLYLDIPPEKAAERGGYGG-ERYEH--LEFQRKVAQCYQML--- 215
C E+G L+PD L LDI P ER GG +R E L FQR+ Y L
Sbjct: 133 RCN--ELGSCGLSPDLTLLLDIDPALGFERATRGGVDRMEEAGLAFQRRTRDAYLRLATE 190
Query: 216 RDSSWKIIDACQSIEDVEKQL 236
+ ++IDA S +V +L
Sbjct: 191 EPARVRVIDARGSQREVLGRL 211
>gi|354603583|ref|ZP_09021581.1| thymidylate kinase [Alistipes indistinctus YIT 12060]
gi|353348963|gb|EHB93230.1| thymidylate kinase [Alistipes indistinctus YIT 12060]
Length = 226
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQ----SH 111
+VLEGLD GK++Q L L G + E FP V G++++ +L +
Sbjct: 3 FIVLEGLDGAGKSTQVRMLQERLSAQGFAYEYLHFPRFDAPVYGELVARFLRGELGALDQ 62
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-------EW 164
++ + + L+++ +R E M+ L+AG +IVDRY YS V + AK D EW
Sbjct: 63 VNPYLVALIYAGDRAEAAPMIRRWLEAGKFVIVDRYVYSNVGYQCAKIDDPADRERLREW 122
Query: 165 CKAPEI---GLLAPDSVLYLDIP 184
E G+ PD L+LD+P
Sbjct: 123 IIDLEYGHNGIPQPDLSLFLDVP 145
>gi|167038531|ref|YP_001666109.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167038727|ref|YP_001661712.1| dTMP kinase [Thermoanaerobacter sp. X514]
gi|256751401|ref|ZP_05492280.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|300913688|ref|ZP_07131005.1| thymidylate kinase [Thermoanaerobacter sp. X561]
gi|307723297|ref|YP_003903048.1| thymidylate kinase [Thermoanaerobacter sp. X513]
gi|320116927|ref|YP_004187086.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687559|sp|B0K119.1|KTHY_THEPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|238687643|sp|B0K7K7.1|KTHY_THEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|166852967|gb|ABY91376.1| dTMP kinase [Thermoanaerobacter sp. X514]
gi|166857365|gb|ABY95773.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256749783|gb|EEU62808.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|300890373|gb|EFK85518.1| thymidylate kinase [Thermoanaerobacter sp. X561]
gi|307580358|gb|ADN53757.1| thymidylate kinase [Thermoanaerobacter sp. X513]
gi|319930018|gb|ADV80703.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 203
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 19/202 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
+G + EG+D CGKT+Q L YL G+++ + R P T VG+ + L ++++ +
Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPG-GTKVGEKVRDILLDKNNFI 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K ++ G +++DR+ S + A+G+ IE K
Sbjct: 61 SPVTEMLLYASSRAQ---LVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKV 117
Query: 167 APEIGLLA--PDSVLYLDIPPEKAAE-RGGYGGERYEHL--EFQRKVAQCY-QMLRD--S 218
EI + PD +Y+DI PE+A + RG +R E +F +KV + Y +++++
Sbjct: 118 VNEIATMGILPDVTIYIDITPEEAMKRRGKREADRLERESWDFHKKVREGYIKLVKEFPK 177
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
+ ID Q + V K + ++V
Sbjct: 178 RFVFIDGMQELMKVHKDIIDVV 199
>gi|78778518|ref|YP_396630.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
gi|123554778|sp|Q31D51.1|KTHY_PROM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78712017|gb|ABB49194.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 212
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL--EGL---GHSVELWRFPDRTTSVGQMISAYLSN 108
+G +V+EG+D CGKT+Q + L +L GL G + R P + ++ L N
Sbjct: 2 KGKFIVIEGIDGCGKTTQINELSKWLPKSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61
Query: 109 QSHLDDHTIH--LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW 164
++ LL+SA+R E S ++ L +I DR+S S +A+ + I++E
Sbjct: 62 NKTNKPSSLAELLLYSADRAEHISKIISPALNNNDWVISDRFSDSTLAYQGYGRKINLEI 121
Query: 165 CKAPEIGLLA---PDSVLYLDIPPEKA-AERGGYGGERYEH--LEFQRKVAQCYQML-RD 217
K E + PD +L+I PE++ R +R E + F KV + ++++ R+
Sbjct: 122 IKKVESIVCQGEYPDLTFFLEISPEESIMRRKNEIPDRIESEGIRFLEKVNEGFKLIARE 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
WK+I A Q+I+ + Q+KE +L+ + K
Sbjct: 182 KKWKVISASQNIKTISNQIKETLLNNFSNDK 212
>gi|307708576|ref|ZP_07645040.1| thymidylate kinase [Streptococcus mitis NCTC 12261]
gi|307615325|gb|EFN94534.1| thymidylate kinase [Streptococcus mitis NCTC 12261]
Length = 212
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLETLLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G++ I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLNIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 ---SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
S IDA +E V + K ++ D++ K
Sbjct: 179 KEGSRIVKIDASFPLEQVVETTKAVLFDRMGLAK 212
>gi|386356492|ref|YP_006054738.1| integral membrane protein with kinase activity [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807000|gb|AEW95216.1| integral membrane protein with kinase activity [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 1183
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 37 PFRMESSSSLRIGNIDSR----GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP 92
PFR + +LR G+ R G + +EG D GK++Q L ++ G GH V + R P
Sbjct: 523 PFRRDLREALRGGDPAQRPFPTGFFIAVEGGDGAGKSTQVQALAEWIRGKGHEVVVTREP 582
Query: 93 DRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSY 149
T++G+ + + L + S + LL++A+R E S++ L+ G +I DRY
Sbjct: 583 G-ATAIGKRLRSILLDVSSTGISHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYID 641
Query: 150 SGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEHL-- 202
S VA+ A G D+ + I G L P + LD+ P+ A +R +R E
Sbjct: 642 SSVAYQGA-GRDLAPTEIARISRWATGGLVPHLTVLLDVSPQTARDRFTEAPDRLESEPP 700
Query: 203 EFQRKVAQCYQMLR---DSSWKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L + + ++DA Q + V + ++ LDQV
Sbjct: 701 EFHERVRAGFLTLAAADPTRYLVVDAGQEPDAVTRIVRH-RLDQV 744
>gi|357400441|ref|YP_004912366.1| thymidylate kinase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766850|emb|CCB75561.1| putative thymidylate kinase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 1190
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 37 PFRMESSSSLRIGNIDSR----GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP 92
PFR + +LR G+ R G + +EG D GK++Q L ++ G GH V + R P
Sbjct: 530 PFRRDLREALRGGDPAQRPFPTGFFIAVEGGDGAGKSTQVQALAEWIRGKGHEVVVTREP 589
Query: 93 DRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSY 149
T++G+ + + L + S + LL++A+R E S++ L+ G +I DRY
Sbjct: 590 G-ATAIGKRLRSILLDVSSTGISHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYID 648
Query: 150 SGVAFSSAKGIDIEWCKAPEI-----GLLAPDSVLYLDIPPEKAAERGGYGGERYEHL-- 202
S VA+ A G D+ + I G L P + LD+ P+ A +R +R E
Sbjct: 649 SSVAYQGA-GRDLAPTEIARISRWATGGLVPHLTVLLDVSPQTARDRFTEAPDRLESEPP 707
Query: 203 EFQRKVAQCYQMLR---DSSWKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L + + ++DA Q + V + ++ LDQV
Sbjct: 708 EFHERVRAGFLTLAAADPTRYLVVDAGQEPDAVTRIVRH-RLDQV 751
>gi|417935366|ref|ZP_12578685.1| dTMP kinase [Streptococcus mitis bv. 2 str. F0392]
gi|340769859|gb|EGR92377.1| dTMP kinase [Streptococcus mitis bv. 2 str. F0392]
Length = 212
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV + Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIDVEEGLARIAANSDREVNRLDLEGLDLHKKVRKGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|14601836|ref|NP_148377.1| thymidylate kinase [Aeropyrum pernix K1]
gi|8134528|sp|Q9YA48.1|KTHY_AERPE RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP
kinase
gi|5105789|dbj|BAA81101.1| thymidylate kinase [Aeropyrum pernix K1]
Length = 208
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V LEG+D G ++ L + L G G LW+ P VG++I +L + +D
Sbjct: 3 IVALEGIDGSGVSTHSRLLHARLAGAGVKSCLWKEPT-EGPVGRLIRGFLRSTEGVDSDL 61
Query: 117 IHLLFSANR-WEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC-----KAPE 169
+ LLF+A+R W R ++E + L+VDRY YS +A+ G +EW KAPE
Sbjct: 62 MALLFAADRLWGLRLGVVERCGGSPEVLVVDRYKYSSLAYQGV-GSGLEWVDAVNRKAPE 120
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGER--YEHLEFQRKVAQCYQ----MLRDSSWKII 223
+L +Y+D+P E A R R +E EF +V Y+ + R K+I
Sbjct: 121 AEIL-----VYIDVPTEVALRRITARERREVFETPEFLERVKSMYEEVLRLARARGVKVI 175
Query: 224 -------DACQSIEDVEKQLKEIVLDQVTACK 248
+ IEDV+ ++ E V + + +
Sbjct: 176 RVEGVRGGVERGIEDVQGEIAERVFEALGLAR 207
>gi|383786633|ref|YP_005471202.1| thymidylate kinase [Fervidobacterium pennivorans DSM 9078]
gi|383109480|gb|AFG35083.1| thymidylate kinase [Fervidobacterium pennivorans DSM 9078]
Length = 199
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQ-----MISAYLSNQSH 111
V EG+D CGK++Q YL+ G R P T +G+ +IS ++++S
Sbjct: 2 FVSFEGIDGCGKSTQIEMFTKYLQSKGIEFVKVREPG-GTKLGEKIRQLLISEEMTSRSE 60
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEWCK 166
L LLF A+R + +++ L+ G ++ DR+++S VA+ GID ++
Sbjct: 61 L------LLFLASRAQLVEEVIKPALEEGKIVVADRFAHSSVAYQGCGRNLGIDVVKMLN 114
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER-GGYGGERYEH--LEFQRKVAQCYQML--RDSSWK 221
+ PD V Y+DIP E A R +R E LEF KV CY L + ++
Sbjct: 115 DFATDHVYPDLVFYIDIPAEVAISRINKEQRDRIEQEGLEFFEKVRNCYLELCKNEKNFV 174
Query: 222 IIDACQSIEDVEKQLKEI 239
+ID + +E + KQ+ I
Sbjct: 175 LIDGTKDVETISKQIIRI 192
>gi|404403818|ref|ZP_10995402.1| thymidylate kinase [Alistipes sp. JC136]
Length = 228
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 32/221 (14%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQ----SH 111
+VLEGLD GK++Q L G E FP V G++I+ +L + +
Sbjct: 2 FIVLEGLDGAGKSTQIRMLRRLFSERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVNE 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIE-------W 164
+D + + LLF+ +R + + AG +I+DRY YS V F AK E W
Sbjct: 62 VDPYLVALLFAGDRAAAGPQIREWIAAGKAVILDRYVYSNVGFQCAKLPAGESRDRLAQW 121
Query: 165 CKAPEIG---LLAPDSVLYLDIP----------PEKAAERGGYGGERYEH---LEFQRKV 208
E G L PD L+LD+P + +R G + H L+ QR+V
Sbjct: 122 ILDLEFGYNDLPRPDMSLFLDVPFTFTESKLTEAREGDDRTYLQGGQDIHEGALDLQRRV 181
Query: 209 AQCY--QMLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTAC 247
+ Y +D+S +++D C + +E E + D++ A
Sbjct: 182 REVYLAAAAKDASLRVVDCCDANGAMES--PERIFDKIRAV 220
>gi|397663831|ref|YP_006505369.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
gi|395127242|emb|CCD05432.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
Length = 212
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EGL+ GK++ + ++ L S R P T +G+++ + + N +
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-GTKIGEILRSIIKNPEYNNV 64
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
LDD + LL A R + +++ L AG +I DR+ S +A+ + +D+
Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNAGQWVIADRFELSTLAYQGGGRKMDMRLINELS 124
Query: 170 ---IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSW 220
+ PD LYLDI PE +A RG + E +EF ++ Y +L ++
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHRIHDTYHILVKQNPDI 184
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+IDA +S+E+V+ ++ ++
Sbjct: 185 MVIDANRSLEEVQSSIQSVI 204
>gi|158521178|ref|YP_001529048.1| dTMP kinase [Desulfococcus oleovorans Hxd3]
gi|229500940|sp|A8ZXL3.1|KTHY_DESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|158510004|gb|ABW66971.1| dTMP kinase [Desulfococcus oleovorans Hxd3]
Length = 214
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSHLDD 114
+ LEG++ GKT+Q RL+ +LE GH+ + R P T +GQ I + L + S +
Sbjct: 2 FITLEGIEGAGKTTQLPRLVDFLEQHGHTCVVTREPG-GTGMGQKIRSLLLDPDNSDMSP 60
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE--- 169
T L++A+R + R ++E L G T++ DR++ + + A+G+D+E +
Sbjct: 61 ETELFLYAADRAQHVRRLIEPALAEGKTVVCDRFADATEVYQGWARGLDMELVQVLNRVA 120
Query: 170 IGLLAPDSVLYLDIPPEKAAER 191
G PD L D+PPE +R
Sbjct: 121 TGGRKPDITLLFDLPPEAGLKR 142
>gi|417915209|ref|ZP_12558830.1| dTMP kinase [Streptococcus mitis bv. 2 str. SK95]
gi|342835323|gb|EGU69574.1| dTMP kinase [Streptococcus mitis bv. 2 str. SK95]
Length = 212
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALQAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA ++ V + K ++ D++ K
Sbjct: 179 KEGNRIAKIDASLPLDQVVEATKTVLFDRMGLAK 212
>gi|294496621|ref|YP_003543114.1| thymidylate kinase [Methanohalophilus mahii DSM 5219]
gi|292667620|gb|ADE37469.1| thymidylate kinase [Methanohalophilus mahii DSM 5219]
Length = 199
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 21/201 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLE--GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+G LV LEG+D GKT+ ++ YLE + + R P + +GQ + + S
Sbjct: 2 KGKLVTLEGIDGSGKTT----IMEYLEQNPIYSDIIFTREPTKDW-IGQAVIRAI--HSD 54
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID-----IEWC 165
+D LLF+A+ E R+ + ++AG +I DRYS S +A+ S+ D +EW
Sbjct: 55 VDPLAELLLFTADHAEHIRNTIIPAVQAGRVIISDRYSDSRIAYQSSTLKDRFDDPVEWI 114
Query: 166 KAPEIGL-LAPDSVLYLDIPPEKAAER--GGYGGERYEHLEFQRKVAQCYQMLRDSS--- 219
K G + PD L LDI PE A R ++E ++F +V + L + +
Sbjct: 115 KQLHRGWSVVPDLTLLLDIDPEIAVSRCNSRDAQTKFEKVDFLSQVRNVFLQLAEENPQR 174
Query: 220 WKIIDACQSIEDVEKQLKEIV 240
+ IIDA Q +E V+K++ + +
Sbjct: 175 FVIIDASQGLEKVKKEVDKAI 195
>gi|310639487|ref|YP_003944245.1| thymidylate kinase [Paenibacillus polymyxa SC2]
gi|386038703|ref|YP_005957657.1| thymidylate kinase [Paenibacillus polymyxa M1]
gi|309244437|gb|ADO54004.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
gi|343094741|emb|CCC82950.1| thymidylate kinase [Paenibacillus polymyxa M1]
Length = 215
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
++ +G + LEG D GKT+ RL Y+E GH V R P + + I + + + +
Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKYMEEEGHPVVTTREPG-GIEISEKIRSIILDPA 59
Query: 111 H--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK 166
H +D T LL++A R + ++ ++ G ++ DR+ S + + A+GI IE
Sbjct: 60 HTSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVA 119
Query: 167 APEIGLLA-----PDSVLYLDIPPEKAAER-GGYGGERYEHLE-----FQRKVAQCY-QM 214
+ I A PD+ YLDI PE R GE + L+ F KV + Y ++
Sbjct: 120 S--INRFAVDDWEPDATFYLDIEPELGLARINASRGEEMDRLDMESISFHHKVREAYLEL 177
Query: 215 LRDSSWK--IIDACQSIEDVEKQLKEIV 240
R + I+DA + E VE+ LK+++
Sbjct: 178 ARKFPERITIVDASPAPEQVEQVLKDLL 205
>gi|419767523|ref|ZP_14293676.1| dTMP kinase [Streptococcus mitis SK579]
gi|383353066|gb|EID30693.1| dTMP kinase [Streptococcus mitis SK579]
Length = 212
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G + R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEENGVEMLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S +A+ +G+DIE
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANTNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGDRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|384438962|ref|YP_005653686.1| thymidylate kinase [Thermus sp. CCB_US3_UF1]
gi|359290095|gb|AEV15612.1| Thymidylate kinase [Thermus sp. CCB_US3_UF1]
Length = 201
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GK++Q S L +LE G V L R P G + Q L
Sbjct: 3 GLFLTLEGLDGAGKSTQASLLARFLEAQGLRVRLTREPGGGLP-GVRPLLLRAGQGELSP 61
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW----CKAP 168
+LLFSA+R E R ++ L+ G ++ DRY S +A+ +G+ + W K
Sbjct: 62 QAEYLLFSADRAEHVRKVILPALEGGEWVVSDRYLDSSLAYQGFGRGLPLPWLLEVAKEA 121
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQML---RDSSWKII 223
+G L P LD+PPE+A R +R E L F ++V + Y L + ++
Sbjct: 122 TLG-LKPRRTFLLDLPPEEALAR-LKDKDRMERMGLAFFQRVREGYLGLARAEPERFVVL 179
Query: 224 DACQSIEDVEKQLKE 238
DA + + +V+ ++E
Sbjct: 180 DATRPVAEVQAAIQE 194
>gi|218289082|ref|ZP_03493319.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
gi|218240907|gb|EED08085.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
Length = 213
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
+G L+ EG+D GKT+Q RL ++LE G V + R P T +G + A L + H
Sbjct: 3 KGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPG-GTRIGDAVRAILLDPRHQE 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPE 169
+ T LL++A+R + ++ L G ++ DR+ + +A+ A G+ W +A
Sbjct: 62 MAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEALN 121
Query: 170 ---IGLLAPDSVLYLDI--PPEKAAERG---GYGGERYEHLE--FQRKVAQCYQMLRDSS 219
+G L PD L+ D+ P ++ R G G +R E + F +VA ++ L +
Sbjct: 122 EYALGGLRPDLTLWFDLDWPTARSRLRARVEGGGLDRIERRDEAFFERVADAFERLWRAM 181
Query: 220 WKI---IDACQSIEDVEKQLKEIV 240
++ IDA +S +D+E++++ +V
Sbjct: 182 PEVRKRIDAARSPDDIEQEIRALV 205
>gi|32477522|ref|NP_870516.1| thymidylate kinase [Rhodopirellula baltica SH 1]
gi|46576444|sp|Q7UIM1.1|KTHY_RHOBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|32448076|emb|CAD77593.1| thymidylate kinase [Rhodopirellula baltica SH 1]
Length = 245
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ L+G+D GK+SQ L L G +V R P +T +G + A L + S L+
Sbjct: 48 GRLITLDGIDGVGKSSQIEILAERLRSEGRNVLCVRDPG-STDLGTKLRAMLLD-SDLEM 105
Query: 115 H--TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
H T +LF A+R E S + + L G T+I DR+ + V + S G +++ ++G
Sbjct: 106 HRRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGG-EVDAQTLWQLG 164
Query: 172 LLA-----PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCY-QMLRDSSWK-- 221
LA PD L LD+P E + +R G +R E +++ KV Q + L ++ +
Sbjct: 165 RLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYMAKVRQAFLDELPNAGGRTH 224
Query: 222 IIDACQSIEDVEKQLKEIVL 241
+IDA +IE+V + + I L
Sbjct: 225 VIDASGTIEEVAETIAAIEL 244
>gi|261330431|emb|CBH13415.1| thymidylate kinase, putative [Trypanosoma brucei gambiense DAL972]
Length = 345
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+ N DS GA++V EG D GK +Q + L+ G + FP G++I LS
Sbjct: 121 LPNNDSEGAVIVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLS 180
Query: 108 NQ----SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK----- 158
+ LD LLFS NR++ + L G +++DRY S ++K
Sbjct: 181 GERGALHDLDPKLFSLLFSLNRFDTLPELRYWLTHGKKILLDRYYTSNFGHQASKLEESE 240
Query: 159 ---------GIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
+++EW K P PD LYLD+PP A
Sbjct: 241 RSDFIRHLEQLELEWLKLP-----PPDVALYLDLPPAAA 274
>gi|157412486|ref|YP_001483352.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
gi|166987706|sp|A8G2D5.1|KTHY_PROM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|157387061|gb|ABV49766.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 212
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL--EGL---GHSVELWRFPDRTTSVGQMISAYLSN 108
+G +V+EG+D CGKT+Q L +L GL G + R P + ++ L N
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPSSGLIKKGSKLITTREPGGSHLGKRLRGLILDN 61
Query: 109 QSHLDDHTIH--LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW 164
+ + LL+SA+R E ++ L +I DR+S S +A+ + I++E
Sbjct: 62 NQNNKPSPLAELLLYSADRAEHVYKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121
Query: 165 CKAPEIGL---LAPDSVLYLDIPPEKAA-ERGGYGGERYEH--LEFQRKVAQCYQML-RD 217
K E + +PD +L+I PE++ R +R E +EF KV + ++++ ++
Sbjct: 122 IKNIESIVCQGESPDLTFFLEISPEESIFRRKNQIPDRIESEGIEFLEKVNKGFKIIAKE 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVT 245
+W +I A Q+I+ + Q+KE VL+ +
Sbjct: 182 KNWTVISASQNIKTISNQIKETVLNNFS 209
>gi|307704911|ref|ZP_07641802.1| thymidylate kinase [Streptococcus mitis SK597]
gi|307621525|gb|EFO00571.1| thymidylate kinase [Streptococcus mitis SK597]
Length = 212
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L A G +I+DR+ S +A+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALETGKLVIMDRFIDSSLAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIVANSNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 ---SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
S IDA +E V + K ++ D++ K
Sbjct: 179 KEGSRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|444914802|ref|ZP_21234942.1| Thymidylate kinase [Cystobacter fuscus DSM 2262]
gi|444714311|gb|ELW55196.1| Thymidylate kinase [Cystobacter fuscus DSM 2262]
Length = 221
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ---- 109
RG L+VLEGLD G T+Q RL + L+ GHSV R P VG +I L+ +
Sbjct: 7 RGLLIVLEGLDGAGTTTQVERLAAALKAEGHSVLTTREPS-DGPVGVLIRQALTGRVVLP 65
Query: 110 ---SHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
L T+ LL++A+R + R+ + L+AG ++ DR S +A+ A + +EW
Sbjct: 66 GGAGPLAPETLALLYAADRTDHLRARVLPALEAGQVVLSDRSVLSSLAYQGAS-LPMEWV 124
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGG---ERYEHLEFQRKVAQCYQ---MLRDSS 219
+A + D L++ + E AA R G E ++ E QR+++Q Y+ LR +
Sbjct: 125 EAINSHAIPADLTLFVQVSIEVAARRRAARGGPEELFDAEEKQRRISQQYEAAIALRGAR 184
Query: 220 WKI--IDACQSIEDV 232
+ ID S+E V
Sbjct: 185 EHVVRIDGDASVEAV 199
>gi|403743520|ref|ZP_10953104.1| thymidylate kinase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122764|gb|EJY56963.1| thymidylate kinase [Alicyclobacillus hesperidum URH17-3-68]
Length = 216
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
D RG + EG+D GKT+Q RL ++LE G V R P T +G + + L N H
Sbjct: 3 DRRGTFITFEGIDGAGKTTQIQRLATWLEEQGLRVVCTREPG-GTRIGDAVRSVLLNPRH 61
Query: 112 --LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKA 167
+ T LL++A+R + ++ L+ G ++ DR+ + +A+ A GI E +A
Sbjct: 62 TEMAARTEVLLYAASRAQLVDQVIRPALEEGAVVLCDRFVDASIAYQGAGLGIGEEAVRA 121
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER----GGYGG-ERYEH--LEFQRKVAQCYQMLRD 217
+G L PD L+ DI +A ER G G +R E +F +VA ++ L+
Sbjct: 122 VNAFALGNLMPDLTLWFDIDWVQARERLLAARGLGSLDRIEQRGADFFDRVASAFRALQI 181
Query: 218 SS---WKIIDACQSIEDVEKQLKEIVLDQVT 245
+ + IDA +E +++++K +V + +
Sbjct: 182 AEPGRIRRIDARLDVEAMQQEIKRVVWNHIN 212
>gi|229816418|ref|ZP_04446719.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
13280]
gi|229807960|gb|EEP43761.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
13280]
Length = 226
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+ SRG + +EG+D CGK++Q + + LE GH V R P + + I L + +
Sbjct: 1 MSSRGLFITVEGIDGCGKSTQARLIAAALEAAGHDVLRLREPG-GVKISEQIREILLDPA 59
Query: 111 HLD--DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC- 165
+++ D LL+ A R + ++ L AG T++ DR+ S A+ + A G+D
Sbjct: 60 NVEMGDVCELLLYEAARAQLVHQVIRPALAAGKTVVCDRFYDSTTAYQAFADGLDRNMVS 119
Query: 166 KAPEIGLLA--PDSVLYLDIPPEKAAER--GGYGGERYE--HLEFQRKVAQCYQML---R 216
+A E+ + PD L D+P E A R G +R E LEFQ +VA ++ +
Sbjct: 120 QANELAVDGCRPDLTLVFDLPVEDALRRRSGREAEDRLELKGLEFQERVAAGFRAVAVDE 179
Query: 217 DSSWKIIDACQSIEDV 232
K+IDA SI +V
Sbjct: 180 PDRVKLIDAGGSIAEV 195
>gi|15805151|ref|NP_293837.1| thymidylate kinase [Deinococcus radiodurans R1]
gi|14285522|sp|Q9RY40.1|KTHY_DEIRA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|6457772|gb|AAF09698.1|AE001873_8 thymidylate kinase [Deinococcus radiodurans R1]
Length = 206
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
S+G + LEG + GKT+Q +RL + L GH+V + R P T ++ L +
Sbjct: 2 SQGLFITLEGPEGAGKTTQLARLEARLRAAGHAVTVTREPGGTPLGTRVREVVLDPAVEI 61
Query: 113 DDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCK---A 167
+ LL+SA+R + R ++ L+ G T++ DRY+ S +A+ A +G+ + + A
Sbjct: 62 EPLGEFLLYSASRAQLVREVLRPALERGETVLCDRYADSSLAYQGAGRGLSLPLLRQITA 121
Query: 168 PEIGLLAPDSVLYLDIPP----EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK-- 221
G L P + LD+ P ++AA RG L F R+V Q + L + +
Sbjct: 122 EVTGGLTPGLTVLLDLDPALGLQRAARRGQPDRLEQADLTFHRRVRQGFLDLAHAEPQRF 181
Query: 222 -IIDACQSIEDVEKQL 236
++DA + +++E ++
Sbjct: 182 LVLDATRPEDELEAEI 197
>gi|374298199|ref|YP_005048390.1| thymidylate kinase [Clostridium clariflavum DSM 19732]
gi|359827693|gb|AEV70466.1| thymidylate kinase [Clostridium clariflavum DSM 19732]
Length = 210
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG + EG D GKT+Q L SYL+ G V + R P T +G+ I + + + +
Sbjct: 3 RGLFITAEGTDGSGKTTQIKLLESYLKDRGFEVVVTREPG-GTKIGEKIRSIILDPDNTK 61
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC-KAP 168
+ T +L+ + R + ++ L+ G +I DR+ S + + I+IE K
Sbjct: 62 MTYITEMMLYVSARAQLVGELIRPSLEQGKVVICDRFVDSSYVYQGFGRNINIELIEKVN 121
Query: 169 EIGL--LAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQMLRD---SS 219
I L + PD L+ D+ P A R G +R E ++F RKV + Y+ L +
Sbjct: 122 SIALDGIMPDVTLFFDVDPNIALSRRIRSTGADRIEQETMDFHRKVYEGYKKLVSKYPNR 181
Query: 220 WKIIDACQSIEDVEKQLKE 238
KIID+ +SIE++ +KE
Sbjct: 182 IKIIDSNRSIEEIFLDVKE 200
>gi|432328497|ref|YP_007246641.1| thymidylate kinase [Aciduliprofundum sp. MAR08-339]
gi|432135206|gb|AGB04475.1| thymidylate kinase [Aciduliprofundum sp. MAR08-339]
Length = 202
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+VLEG+D GK++ L YL G V L P +T +G+ + + + + +T
Sbjct: 2 FIVLEGIDGSGKSTIAKMLADYLGERGKKVYLTEEPTKTW-LGEAVRRGIEEEKN--PYT 58
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--GI-----DIEWC-KAP 168
LLF A+R E ++ K++ G +I DRY YS A+ A+ GI IEW K
Sbjct: 59 QALLFFADRAEHVMEIKRKIEEGYVVISDRYVYSTYAYQGAQLYGILRLEDAIEWFNKVY 118
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGG-----ERYEHLEFQRKVAQCYQMLRDS-SWKI 222
E L PD V+ L I P + G+ E++E EF +V + Y +L S + +
Sbjct: 119 EPMRLDPDVVILLKIDPARGL---GFVNTRDFREKFEREEFLNRVQEIYDLLAQSHGFYV 175
Query: 223 IDACQSIEDV 232
+D+ + IE V
Sbjct: 176 VDSNRQIEKV 185
>gi|73852905|ref|YP_294189.1| putative thymidylate kinase [Emiliania huxleyi virus 86]
gi|72415621|emb|CAI65858.1| putative thymidylate kinase [Emiliania huxleyi virus 86]
Length = 327
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS---- 107
+ RG + V+EG D CGK +Q + L LE + V+ FP+ G +I L+
Sbjct: 103 ERRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHG 162
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------G 159
+ +LD L++ NRW + ++ + G +I+DRY S +A A
Sbjct: 163 DIKNLDPFLFASLYAQNRWSVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY 212
E + +GL + ++YLD+PPE K R LE++ V + Y
Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVARTAMDKDTTRVALDQNELAPLEYKNNVRKIY 282
Query: 213 QMLRDSSWKIIDACQSIED 231
+++ + D + ++D
Sbjct: 283 LEQKNTLRRTYDIVKCMDD 301
>gi|126458752|ref|YP_001055030.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
gi|171855086|sp|A3MSE7.1|KTHY_PYRCJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|126248473|gb|ABO07564.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
Length = 193
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ +EG+D GKT+ + + L V + R P +G+++ + D H
Sbjct: 2 FIAVEGIDGSGKTTVIAEVAKALP----RVYVTREPS-GGPIGRLLKEWALRGGTADPHV 56
Query: 117 IHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
LLF+A+R E + +E KL+ G +I +RY S +A+ A G+ IE+ + P
Sbjct: 57 DALLFAADRVEHYKREIEPKLREGYIVITERYVESSIAYQGAAGVPIEYILYINSVVPRP 116
Query: 176 DSVLYLDIPPEKAAER--GGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIEDV 232
+ LD+ P +A +R E++E +EF R+V + Y R + +IDA + +V
Sbjct: 117 HLTIILDVDPAEAIKRIKARERLEKFEDVEFLRRVREIYLTRARAEGYPVIDAGRPAGEV 176
Query: 233 EKQLKEIV 240
K + I+
Sbjct: 177 AKDVVAII 184
>gi|398783975|ref|ZP_10547304.1| thymidylate kinase, partial [Streptomyces auratus AGR0001]
gi|396995564|gb|EJJ06577.1| thymidylate kinase, partial [Streptomyces auratus AGR0001]
Length = 776
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 37 PFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP 92
P R + +LR G+ G + LEG D GK++Q L ++ G GH V + R P
Sbjct: 472 PLRRDLLEALRGGDPAQAPAPTGFFIALEGGDGAGKSTQVEALAEWIRGKGHEVVVTREP 531
Query: 93 DRTTSVGQMISAYL--SNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSY 149
T++G+ + + + + S L D L+F+A+R E S++ L+ G ++ DRY
Sbjct: 532 G-ATAIGKRLRSIILDVSTSGLSDRAEALMFAADRAEHVNSVIRPALERGAVVLTDRYID 590
Query: 150 SGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--L 202
S VA+ A G ++ + I L P + LDI PE A ER +R E
Sbjct: 591 SSVAYQGA-GRNLAPTEIARISRWATDGLVPHLTVLLDISPETARERFTEAPDRLESEPA 649
Query: 203 EFQRKVAQCYQMLR---DSSWKIIDACQSIEDVEKQLKEIVLDQV 244
F ++V + L + + ++DA Q E V ++ LDQV
Sbjct: 650 AFHQRVRAGFLTLAAADPARYLVVDAGQEPEAVTTVVRH-RLDQV 693
>gi|298244278|ref|ZP_06968084.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
gi|297551759|gb|EFH85624.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
Length = 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 26/207 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS--H 111
RG L+ EGLD GKT+Q + L ++L+ G S R P + +G I L N+ H
Sbjct: 3 RGVLISFEGLDGAGKTTQMNLLEAWLQSQGVSYLRTREPG-GSPLGVEIRRLLLNRPDLH 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
+ LLF A+R + ++ L G ++ DR S +A+ +A+G+ + + +
Sbjct: 62 ISPLAEALLFQADRAQHFAEVILPALDEGKVIVSDRCFDSSIAYQGAARGVGEQLVE--D 119
Query: 170 IGLLA-----PDSVLYLDIPPEKAAERGGY----GGERYEHLEFQRKVAQCYQMLRDS-- 218
+ LLA PD + LD+PPEK +R GG R E F R+ ++ LR++
Sbjct: 120 LSLLATQGHQPDLTIMLDLPPEKVQQRTNLAVDQGGTRTEQSHFDRETETFHRTLREAFL 179
Query: 219 --------SWKIIDACQSIEDVEKQLK 237
K++DA ++ E ++++++
Sbjct: 180 TLARRHPQRIKVLDASRTPEVIQREIQ 206
>gi|228476228|ref|ZP_04060931.1| dTMP kinase [Staphylococcus hominis SK119]
gi|228269713|gb|EEK11212.1| dTMP kinase [Staphylococcus hominis SK119]
Length = 205
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 55 GALVVLEGLDRCGKTS---QCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
A + EG + GKT+ Q ++LLS ++V R P S G+ I L + +
Sbjct: 2 AAFITFEGPEGSGKTTVLNQINKLLSE----NYNVISTREPG-GVSTGEEIRNILLDGEN 56
Query: 112 LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+D T LLF+A+R E ++ A LK ++ DRY S +A+ A+GI IE K
Sbjct: 57 IDIRTEALLFAASRREHLVEKVIPA-LKNNKVVLCDRYIDSSLAYQGYARGIGIEEVKKI 115
Query: 169 E---IGLLAPDSVLYLDIPPEKAAER---GGYGGERY--EHLEFQRKVAQCYQMLRDSS- 219
I L PD +YLDI E ER R E L F +KV + Y+ L ++
Sbjct: 116 NEFAINGLYPDLTIYLDIDAEVGRERILKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175
Query: 220 --WKIIDACQSIEDVEKQLKEIVL 241
+K++DA QSIE V EI+L
Sbjct: 176 ERFKVVDATQSIESVISNTYEIIL 199
>gi|297543636|ref|YP_003675938.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841411|gb|ADH59927.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 204
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHL 112
+G + EG+D CGKT+Q L YL G+++ + R P T+VG+ + L ++ + +
Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPG-GTNVGEKVRDILLDKYNFI 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K +K G +++DR+ S + A+G+ IE K
Sbjct: 61 SPVTEMLLYASSRAQ---LVEEKILPAIKEGKIVLLDRFVDSSYVYQGYARGLGIEKVKI 117
Query: 167 APEIGLLA--PDSVLYLDIPPEKAAE-RGGYGGERYEHL--EFQRKVAQCYQMLRDSSWK 221
EI + PD +Y+DI PE+A + RG +R E +F +KV + Y L K
Sbjct: 118 VNEIATMGILPDVTIYIDITPEEAMKRRGKREADRLERESWDFHKKVREGYIKLVKEYPK 177
Query: 222 ---IIDACQSIEDVEKQLKEIVLDQVTACKK 249
ID Q I V + D + A KK
Sbjct: 178 RFVFIDGMQEIVKVHQ-------DIIDAVKK 201
>gi|254166701|ref|ZP_04873555.1| thymidylate kinase [Aciduliprofundum boonei T469]
gi|289596133|ref|YP_003482829.1| thymidylate kinase [Aciduliprofundum boonei T469]
gi|197624311|gb|EDY36872.1| thymidylate kinase [Aciduliprofundum boonei T469]
gi|289533920|gb|ADD08267.1| thymidylate kinase [Aciduliprofundum boonei T469]
Length = 197
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GK++ R+ +L LGH + L P TT +G+ + + + + +
Sbjct: 2 FIVFEGIDGSGKSTIARRIAKHLSSLGHDIFLTEEP-TTTWMGKDVRRAIEEEKN--PLS 58
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GID--IEWCKAP- 168
LLF A+R E ++ L+ G +I DRY YS A+ A+ +D ++W +
Sbjct: 59 QALLFFADRAEHVEAIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLEGVY 118
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCYQMLRDS-SWKIIDA 225
E L PD V+ L I P + + E++E EF +V Y L D + ++D+
Sbjct: 119 EPMRLDPDMVILLKIEPRRGLDFVNTRDFKEKFEREEFLERVQDIYMDLADKYGFFVVDS 178
Query: 226 CQSIEDVEKQLKEIVLDQV 244
+++ +V + +++I+ D++
Sbjct: 179 NRNLNEVYEDVRKIIDDRI 197
>gi|421614429|ref|ZP_16055489.1| thymidylate kinase [Rhodopirellula baltica SH28]
gi|408494818|gb|EKJ99416.1| thymidylate kinase [Rhodopirellula baltica SH28]
Length = 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ L+G+D GK+SQ L L G +V R P +T +G + A L + S L+
Sbjct: 24 GRLITLDGIDGVGKSSQIEILAERLRSEGGNVLCVRDPG-STDLGTKLRAMLLD-SDLEM 81
Query: 115 H--TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
H T +LF A+R E S + + L G T+I DR+ + V + S G +++ ++G
Sbjct: 82 HRRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGG-EVDAQTLWQLG 140
Query: 172 LLA-----PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCY-QMLRDSSWK-- 221
LA PD L LD+P E + +R G +R E +++ KV Q + L ++ +
Sbjct: 141 RLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYMAKVRQAFLDELPNAGGRTH 200
Query: 222 IIDACQSIEDVEKQLKEIVL 241
+IDA +IE+V + + I L
Sbjct: 201 VIDASGTIEEVAETIAAIEL 220
>gi|78187170|ref|YP_375213.1| thymidylate kinase [Chlorobium luteolum DSM 273]
gi|123582911|sp|Q3B3B1.1|KTHY_PELLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78167072|gb|ABB24170.1| thymidylate kinase [Chlorobium luteolum DSM 273]
Length = 214
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GK++Q +L +YL+ G V R P T ++ L ++ +
Sbjct: 2 LITFEGIDGAGKSTQIQKLAAYLKQEGREVLTLREPGGTEVAEKIRHILLESRHDITPVG 61
Query: 117 IHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK---APEIG 171
LLFSA+R E S ++ L G T+I+DR+ S A+ +G+D+ + A G
Sbjct: 62 ELLLFSASRAELVSEVVRPALAEGKTVILDRFFDSTTAYQGYGRGLDLNMLRTLIAISTG 121
Query: 172 LLAPDSVLYLDIPPEKAAERG--------GYGGERYEH-----LEFQRKVAQCYQMLRDS 218
L PD YLDI PE+A R + E + LEF R V Q Y + ++
Sbjct: 122 ALTPDITFYLDILPEEALIRKFSEKSLPLAFENEELDRMERSGLEFYRNVRQGYLDIIEA 181
Query: 219 S---WKIIDACQSIEDV 232
+K I+A ++++
Sbjct: 182 EPGRFKSINARHGVQEI 198
>gi|357236666|ref|ZP_09124009.1| dTMP kinase [Streptococcus criceti HS-6]
gi|356884648|gb|EHI74848.1| dTMP kinase [Streptococcus criceti HS-6]
Length = 217
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT---SVGQMISAYL 106
N +G L+ LEG D GKTS +L+ LE G+ V R P S+ Q+I
Sbjct: 5 NTQKKGHLITLEGPDGAGKTSVLKQLVPLLEAQGYQVVTTREPGGVAIAESIRQVILDV- 63
Query: 107 SNQSHLDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFS-SAKGI-- 160
N + +D+ T LL+ A R ++ ++E L A G +++DR+ S VA+ S +G+
Sbjct: 64 -NNTAMDEKTELLLYIAAR--RQHLVEKVLPALAQGKLVLIDRFIDSSVAYQGSGRGLSV 120
Query: 161 -DIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQ 213
DI W I P+ L D+P E R R E L+ ++V Q Y
Sbjct: 121 TDINWLNDYAIEETKPELTLLFDLPSEVGLARIEQADVREVNRLDLEKLDLHQRVRQGYL 180
Query: 214 ML---RDSSWKIIDACQSIEDV 232
L + KIIDA Q +E V
Sbjct: 181 DLAKNQPERIKIIDAAQGLEKV 202
>gi|352681987|ref|YP_004892511.1| thymidylate kinase [Thermoproteus tenax Kra 1]
gi|350274786|emb|CCC81432.1| Thymidylate kinase [Thermoproteus tenax Kra 1]
Length = 196
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 13/190 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ +EG+D GK++ S LL + G+ + E P +G++I + D +
Sbjct: 3 FIAIEGIDGSGKSTVIS-LLREMLGIYATKEPSSGP-----IGRLIKEWSLKGGTQDPYV 56
Query: 117 IHLLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R + +R + A L G ++ +RY S +A+ A G+DI + + +
Sbjct: 57 DALLFAADRLDHYQREIAPA-LAKGYIVVTERYIESSIAYQGAAGVDIGFIELVNSRVRR 115
Query: 175 PDSVLYLDIPPEKAAERGGYGG---ERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIE 230
PD + LDI P KA ER + G E+YE +EF R+V Y + ++DA +
Sbjct: 116 PDLTIILDIDPSKALERVRFRGTALEKYEKIEFLRRVRAIYLDRAAKFGYAVLDADRGPR 175
Query: 231 DVEKQLKEIV 240
+V + + +V
Sbjct: 176 EVAEDVARLV 185
>gi|160933042|ref|ZP_02080431.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753]
gi|156868116|gb|EDO61488.1| dTMP kinase [Clostridium leptum DSM 753]
Length = 222
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-----S 107
+RG L+V+EGLD GK +Q L YLE G V FPD ++ YL S
Sbjct: 2 ARGKLIVMEGLDGSGKATQTGLLCQYLESRGRRVRHIEFPDYREPSSALVKMYLNKEFGS 61
Query: 108 NQSHLDDHTIHLLFSANR-------WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI 160
N ++ + ++ +R W K + +G T++ DRY+ S + K
Sbjct: 62 NPGDVNAYAASSFYAVDRYASFLRFWRKDYL------SGATIVADRYTTSNAVYQMEKTP 115
Query: 161 DIEWCK---------APEIGLLAPDSVLYLDIPPEKAAE--RGGYGGERYE------HLE 203
+W K ++ L PD VL+LD+P E + G Y G+ + ++E
Sbjct: 116 REDWNKYLAWLQDYEYGKLQLPRPDLVLFLDMPTEISQRLLSGRYAGDERKKDLHESNVE 175
Query: 204 FQRKVAQCYQMLRDS-SWKIID-----ACQSIEDVEKQLKEIV 240
F + + ++ W + A + IED+++ ++EIV
Sbjct: 176 FLTRCRRTALYAAEAMGWHTVSCSQEGAPRKIEDIQRDIREIV 218
>gi|417300359|ref|ZP_12087574.1| thymidylate kinase [Rhodopirellula baltica WH47]
gi|327543342|gb|EGF29771.1| thymidylate kinase [Rhodopirellula baltica WH47]
Length = 225
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ L+G+D GK+SQ L L G V R P +T +G + A L + S L+
Sbjct: 24 GRLITLDGIDGVGKSSQIEILAERLRSEGRQVLCVRDPG-STDLGTKLRAMLLD-SDLEM 81
Query: 115 H--TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
H T +LF A+R E S + + L G T+I DR+ + V + S G +++ ++G
Sbjct: 82 HRRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGG-EVDAQTLWQLG 140
Query: 172 LLA-----PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCY-QMLRDSSWK-- 221
LA PD L LD+P E + +R G +R E +++ KV Q + L ++ +
Sbjct: 141 RLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYMAKVRQAFLDELPNAGGRTH 200
Query: 222 IIDACQSIEDVEKQLKEIVL 241
+IDA +IE+V + + I L
Sbjct: 201 VIDASGTIEEVAETIAAIEL 220
>gi|347482409|gb|AEO98350.1| thymidylate kinase [Emiliania huxleyi virus 203]
gi|347600969|gb|AEP15455.1| thymidylate kinase [Emiliania huxleyi virus 207]
gi|357972868|gb|AET98141.1| hypothetical protein EPVG_00254 [Emiliania huxleyi virus 201]
Length = 327
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS---- 107
+ RG + V+EG D CGK +Q + L LE + V+ FP+ G +I L+
Sbjct: 103 ERRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHG 162
Query: 108 NQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--------G 159
+ +LD L++ NRW + ++ + G +I+DRY S +A A
Sbjct: 163 DIKNLDPFLFASLYAQNRWSVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222
Query: 160 IDIEWCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY 212
E + +GL + ++YLD+PPE K R LE++ V + Y
Sbjct: 223 KQTELFENEILGLPHVNHIIYLDLPPEVARTAMDKDTTRVALDQNELAPLEYKNNVRKIY 282
Query: 213 QMLRDSSWKIIDACQSIED 231
+++ + D + ++D
Sbjct: 283 LEQKNTLRRTYDIVKCMDD 301
>gi|118589860|ref|ZP_01547264.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614]
gi|118437357|gb|EAV43994.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614]
Length = 241
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-LD 113
G + EG + GK++Q +RL +YLEG+G SV + R P + ++ + LS + L
Sbjct: 16 GHFITFEGGEGAGKSTQIARLKTYLEGMGQSVVVTREPGGSPGAEKIRTMLLSGGAKDLG 75
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+LF+A R + + ++ L+ G ++ DRY+ S + G+D E+ K E
Sbjct: 76 PRGEAMLFAAARADHVDTTIKPALERGDWVLCDRYADSTWVYQGEAGVDREYLKLLETAA 135
Query: 173 LA---PDSVLYLDIPPE----KAAER----GGYGGERYEHLEF---QRKVAQCYQMLRDS 218
+A PD + +D+P E + AER G +R+E + QR+ ++ +
Sbjct: 136 VAGVYPDLTILIDVPVEIGLGRVAERSRTDNSGGPDRFEDEDLKVHQRRRELFLELAKIE 195
Query: 219 SWK--IIDACQSIEDVEKQLKEIV 240
S++ +ID + +++V ++E V
Sbjct: 196 SFRFAVIDGSKGLDEVAAAIREAV 219
>gi|283458750|ref|YP_003363389.1| thymidylate kinase [Rothia mucilaginosa DY-18]
gi|283134804|dbj|BAI65569.1| thymidylate kinase [Rothia mucilaginosa DY-18]
Length = 239
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG +V+EG D GKT+Q + L L G+ V R P T +G+ + A + + Q
Sbjct: 22 RGLFIVVEGGDGAGKTTQLALLNEALSARGYRVITTREPG-GTEIGEKLRALVLEAGQGT 80
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE------ 163
+DD T L+F+A+R S ++ L G ++ DRY S A+ + + IE
Sbjct: 81 IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGIETIVDLS 140
Query: 164 -WCKAPEIGLLAPDSVLYLDIP----PEKAAERGGYGGERYEHLEFQRKVAQCYQML--- 215
W A L PD+ L L +P E+ +RG E F+ ++ ++ +
Sbjct: 141 RWATAD----LVPDATLLLSVPLSAEQERMDQRGTVDRIEAEGAAFKARIHGAFEQIARE 196
Query: 216 -RDSSWKIIDACQSIEDVEKQLKEIV 240
+ S +IID +I++V ++ E++
Sbjct: 197 DANGSHRIIDGVGTIDEVHARVLEVI 222
>gi|218294864|ref|ZP_03495718.1| dTMP kinase [Thermus aquaticus Y51MC23]
gi|218244772|gb|EED11296.1| dTMP kinase [Thermus aquaticus Y51MC23]
Length = 201
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP-DRTTSVGQMISAYLSNQSHLD 113
G + LEGLD GK++Q L ++LEG G V L R P V ++ L + L
Sbjct: 3 GLFLTLEGLDGSGKSTQAKLLAAFLEGRGLPVVLTREPGGGLPGVRDLLLNPL--KGPLS 60
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW----CKA 167
+LL SA+R E R ++ L+AG ++ DRY S +A+ +G+ + W K
Sbjct: 61 PEAEYLLLSADRAEHVRKVILPSLEAGAWVVSDRYLDSSLAYQGFGRGLPLPWLLEVAKE 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WKI 222
+G L P LD+PPE+A R +R E L F ++V + Y L + +
Sbjct: 121 ATLG-LTPRLTFLLDLPPEEALRR-VKDPDRLEREGLAFFQRVREGYLFLAKEEPHRFVV 178
Query: 223 IDACQSIEDVEKQLK 237
+DA +S+E V ++++
Sbjct: 179 LDATESVEAVAQRIQ 193
>gi|406970983|gb|EKD95190.1| Thymidylate kinase [uncultured bacterium]
Length = 206
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG + GK +Q L L LG+ V L T VGQ I L ++ LD
Sbjct: 2 LIAFEGGEGSGKGTQIEMLKKSLANLGYDV-LDIIEPGGTPVGQTIRNILLDRKDLDILG 60
Query: 117 IH--LLFSANRWEK-RSMMEAKLKAGTTLIVDR-----YSYSGVAFSSAKGIDIEWCKAP 168
I LFSA+R ++ R++ LK G ++ DR Y+Y G K + +E +
Sbjct: 61 ITEVFLFSASRAQQVRTVTRPALKQGKIVLSDRSFYSTYAYQGAGRRQPKEL-LEQLTSF 119
Query: 169 EIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WK 221
+G PD V+ LD+ PE + ++ E LEF + V Y + +++ W+
Sbjct: 120 AVGETTPDLVILLDLSPEVGLARKKDQNKINRLDAETLEFHKNVRDAYLTMAETNPKLWR 179
Query: 222 IIDACQSIEDVEKQLKEIVLD 242
+++A +E++ ++K IV +
Sbjct: 180 VVNAETGVEEIHSRIKTIVFE 200
>gi|145219852|ref|YP_001130561.1| thymidylate kinase [Chlorobium phaeovibrioides DSM 265]
gi|189030836|sp|A4SF00.1|KTHY_PROVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|145206016|gb|ABP37059.1| thymidylate kinase [Chlorobium phaeovibrioides DSM 265]
Length = 215
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GK++Q +L ++L G V R P T + L ++ +
Sbjct: 2 LITFEGIDGAGKSTQIRKLAAHLRSQGQEVLTLREPGGTEVAENIRLILLESRHDITPVG 61
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK---APEIG 171
LLFSA+R E ++ LK GTT+I+DR+ S A+ +GID+ A G
Sbjct: 62 ELLLFSASRAELVNEVIRPALKEGTTVILDRFFDSTTAYQGYGRGIDLPTLNSIIALSTG 121
Query: 172 LLAPDSVLYLDIPPEKAAERG--------GYGGERYEHLE-----FQRKVAQCYQ-MLRD 217
L PD YLDI PE+A R + + + +E F RKV + Y+ ++++
Sbjct: 122 GLKPDITFYLDILPEEALIRKFSEKSIPLAFDNDELDRMERSGLDFYRKVYEGYRCIMQE 181
Query: 218 SSWKI--IDACQSIED----VEKQLKE 238
+ I+A +SI++ V K LKE
Sbjct: 182 EPDRFVSINARKSIQEIHTTVTKTLKE 208
>gi|322376438|ref|ZP_08050931.1| dTMP kinase [Streptococcus sp. M334]
gi|321282245|gb|EFX59252.1| dTMP kinase [Streptococcus sp. M334]
Length = 212
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S +A+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R R E L+ +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETAKAVLFDRMGLPK 212
>gi|418619046|ref|ZP_13181888.1| dTMP kinase [Staphylococcus hominis VCU122]
gi|374825752|gb|EHR89675.1| dTMP kinase [Staphylococcus hominis VCU122]
Length = 205
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 55 GALVVLEGLDRCGKTS---QCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
A + EG + GKT+ Q ++LLS ++V R P S G+ I L + +
Sbjct: 2 AAFITFEGPEGSGKTTVLNQINKLLSE----NYNVISTREPG-GVSTGEEIRNILLDGEN 56
Query: 112 LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+D T LLF+A+R E ++ A LK ++ DRY S +A+ A+GI IE K
Sbjct: 57 IDIRTEALLFAASRREHLVEKVIPA-LKNNKVVLCDRYIDSSLAYQGYARGIGIEEVKKI 115
Query: 169 E---IGLLAPDSVLYLDIPPEKAAER---GGYGGERY--EHLEFQRKVAQCYQMLRDSS- 219
I L PD +YLDI E ER R E L F +KV + Y+ L ++
Sbjct: 116 NEFAINGLYPDLTIYLDIDAEVGRERILKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175
Query: 220 --WKIIDACQSIEDVEKQLKEIVL 241
+K++DA QSIE V EI+L
Sbjct: 176 ERFKVVDATQSIESVISDTYEIIL 199
>gi|294813363|ref|ZP_06772006.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
gi|326441702|ref|ZP_08216436.1| thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
gi|294325962|gb|EFG07605.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
Length = 1131
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 37 PFRMESSSSLRIGNIDSR-----GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRF 91
P R + +LR G ++ G + LEG D GK++Q L +++ GH V + R
Sbjct: 513 PLRRDLGEALRGGADPAQAPAATGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTRE 572
Query: 92 PDRTTSVGQMISAYLSN--QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYS 148
P T VG+ + + L + + L + LL++A+R E S++ L+ G +I DRY
Sbjct: 573 PG-ATPVGKRLRSILLDVASAGLSNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYI 631
Query: 149 YSGVAFSSAKGIDIEWCKAPEIGLLAPDSV-----LYLDIPPEKAAERGGYGGERYEH-- 201
S VA+ A G D+ + I A D + + LD+ PE A ER +R E
Sbjct: 632 DSSVAYQGA-GRDLSPTEIARISRWATDGLVPHLTVLLDVSPETARERFTEAPDRLESEP 690
Query: 202 LEFQRKVAQCYQMLR---DSSWKIIDACQSIEDVEKQLKEIVLDQV 244
EF R+V + L + + ++DA Q E V ++ LDQ+
Sbjct: 691 AEFHRRVRSGFLTLAAGDPARYLVVDAGQEPEAVTTVVRH-RLDQM 735
>gi|115315297|ref|YP_764020.1| thymidylate kinase [Francisella tularensis subsp. holarctica OSU18]
gi|122324708|sp|Q0BKK1.1|KTHY_FRATO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|115130196|gb|ABI83383.1| dTMP kinase [Francisella tularensis subsp. holarctica OSU18]
Length = 209
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ S + YLE + R P T ++ + L N+ + H+
Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64
Query: 117 ---IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL 172
+ ++++ R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNNNF 124
Query: 173 L---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWKI-I 223
L PD V+YLDI P +R G +R E LEF + + ++ +++D I I
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRTRKVFKDLVKDLDNAIEI 184
Query: 224 DACQSIEDVEKQLKEIVLDQ 243
DA +SI++VEKQ+ ++LD+
Sbjct: 185 DAAKSIQEVEKQIY-LILDK 203
>gi|351732171|ref|ZP_08949862.1| dTMP kinase [Acidovorax radicis N35]
Length = 225
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + EG+D GK+S L S G SV + R P T ++ L++
Sbjct: 5 GLFITFEGIDGAGKSSHIEGLASAFRAQGRSVTVSREPGGTPLAEKLREMVLNDPMDALT 64
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDI----------E 163
++ L+F+A R R+++E L G ++ DR++ + A+ A +G D+ +
Sbjct: 65 ESL-LIFAARRDHLRNVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLGVLSVLERLAQ 123
Query: 164 WCKAPEIGLL-APDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCY---QML 215
APE L+ PD ++ D+ PE AAER G +R+E +EF R+VAQ Y
Sbjct: 124 TGLAPEADLMREPDLTVWFDLAPEVAAERLAGARVPDRFEAQPVEFFRRVAQGYADRAAA 183
Query: 216 RDSSWKIIDACQSIEDVEKQLKEIVLDQ----VTACKKGKP 252
+ +DA Q V +QL + + + + +G P
Sbjct: 184 APQRFARLDAAQERHRVWQQLTSVFVRKGWLAIMVATQGGP 224
>gi|315612950|ref|ZP_07887861.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296]
gi|315315060|gb|EFU63101.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296]
Length = 212
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIRQVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV + Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDMEGLDLHKKVRKGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V K ++ D++ K
Sbjct: 179 KEGNRMVKIDASLPLEQVVDATKAVLFDRMGLDK 212
>gi|443323575|ref|ZP_21052580.1| thymidylate kinase [Gloeocapsa sp. PCC 73106]
gi|442786755|gb|ELR96483.1| thymidylate kinase [Gloeocapsa sp. PCC 73106]
Length = 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDR-------TTSVGQMISAYL 106
+ +VLEG+D GK++Q L +Y + V + P T + Q ++ Y
Sbjct: 2 KPLFIVLEGIDSSGKSTQAELLYNYYLSITQPVVVSPEPTNGPIGKFIRTILSQQVNLYQ 61
Query: 107 SNQSHLDDHTIHLLFSANR----WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI 162
+NQS D + LF+A+R + + + L+ T+I RY +S +A+ D
Sbjct: 62 NNQSF--DRQMSYLFAADRHYHVYNQNEGILTLLRQKVTIISTRYYFSSLAYHCQNPRDW 119
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQMLRDS 218
E K+ PD ++YLDIP E + AER E YE+ ++V YQ++
Sbjct: 120 ELVKSLNQEFPNPDLLIYLDIPLEICLTRLAERA--TPEVYENKHKLQQVKSNYQVI--- 174
Query: 219 SWK-------IIDACQSIEDVEKQLKEIV 240
W+ +DA QS E + +Q+ E +
Sbjct: 175 -WREYQGLKLQLDATQSQEKIHQQIVEFI 202
>gi|357238370|ref|ZP_09125707.1| dTMP kinase [Streptococcus ictaluri 707-05]
gi|356753093|gb|EHI70214.1| dTMP kinase [Streptococcus ictaluri 707-05]
Length = 211
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYL--SNQS 110
+G L+ EG D GKT+ L L EGL +V R P ++ + I + N +
Sbjct: 3 KGKLITFEGPDGAGKTTVLEALFPRLQEGLEQTVVRTREPG-GVAIAENIRHLILDVNNT 61
Query: 111 HLDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+D T LL+ A R ++ M+E L AG ++VDR+ S VA+ A +G+D I+
Sbjct: 62 QMDKKTELLLYIAAR--RQHMVEKVLPALHAGQLILVDRFIDSSVAYQGAGRGLDKSAIQ 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W ++PD LY D+P E R +R E L+ ++V Q Y + +
Sbjct: 120 WLNNFATDGISPDLTLYFDVPSEVGLARIAQNKDREINRLDLEQLDMHQRVRQGYLDLAK 179
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q++E V
Sbjct: 180 ENPDRIVTIDASQALESV 197
>gi|91775853|ref|YP_545609.1| thymidylate kinase [Methylobacillus flagellatus KT]
gi|123078858|sp|Q1H169.1|KTHY_METFK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|91709840|gb|ABE49768.1| thymidylate kinase [Methylobacillus flagellatus KT]
Length = 203
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + LEG+D GK+S ++S LEG G V R P T ++ L + H++
Sbjct: 2 RGRFITLEGMDGAGKSSHIESIVSVLEGRGLEVVSTREPGGTPLGEKLRELLLHERMHVE 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL 172
T+ L+F+A R ++E L G ++ DR++ + A+ +G+ E +A E +
Sbjct: 62 TETL-LMFAARREHIAEVIEPALARGAWVVSDRFTDASFAYQCGGRGVPCEKVEALEAWV 120
Query: 173 ---LAPDSVLYLDIPPEK-----AAERGGYGGERYEHLEFQRKVAQCYQMLRDSS---WK 221
L PD L D+P E AA R ER E EF R++ Y ++ ++
Sbjct: 121 HPDLQPDLTLLFDVPVEISVARLAAARTPDKFER-ESAEFFRRIRNGYLARAEAQPQRFR 179
Query: 222 IIDACQSIEDVEKQLKEIV 240
+ID + ++ V K++ +I+
Sbjct: 180 LIDGNRPMDTVRKEVLDIM 198
>gi|291438148|ref|ZP_06577538.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672]
gi|291341043|gb|EFE67999.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672]
Length = 966
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 20/228 (8%)
Query: 34 SCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +L G+ D + G + LEG D GK++Q L ++ GH V L
Sbjct: 483 SGVPLRQDLRDALLGGDPDQTPAASGFFIALEGGDGAGKSTQAEALAEWIRSKGHEVVLT 542
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I DR
Sbjct: 543 REPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHIDTVVRPALERGAVVISDR 601
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSV-----LYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I A D + + LD+ PE A ER +R E
Sbjct: 602 YIDSSVAYQGA-GRDLSPTEIARINRWATDGLVPHLTVLLDVAPETARERFTEAPDRLES 660
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L + + ++DA Q E V ++ LDQV
Sbjct: 661 EPAEFHARVRAGFLTLAAADPGRYLVVDAGQEPEAVTTVIRH-RLDQV 707
>gi|89256933|ref|YP_514295.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS]
gi|156503123|ref|YP_001429188.1| thymidylate kinase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368198|ref|ZP_04984218.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257]
gi|254369798|ref|ZP_04985808.1| thymidylate kinase [Francisella tularensis subsp. holarctica
FSC022]
gi|290953993|ref|ZP_06558614.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1]
gi|422939211|ref|YP_007012358.1| thymidylate kinase [Francisella tularensis subsp. holarctica
FSC200]
gi|423051300|ref|YP_007009734.1| thymidylate kinase [Francisella tularensis subsp. holarctica F92]
gi|122500313|sp|Q2A1V7.1|KTHY_FRATH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|166221742|sp|A7NE29.1|KTHY_FRATF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|89144764|emb|CAJ80099.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS]
gi|134254008|gb|EBA53102.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257]
gi|156253726|gb|ABU62232.1| thymidylate kinase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157122757|gb|EDO66886.1| thymidylate kinase [Francisella tularensis subsp. holarctica
FSC022]
gi|407294362|gb|AFT93268.1| thymidylate kinase [Francisella tularensis subsp. holarctica
FSC200]
gi|421952022|gb|AFX71271.1| thymidylate kinase [Francisella tularensis subsp. holarctica F92]
Length = 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ S + YLE + R P T ++ + L N+ D
Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKY---DEE 61
Query: 117 IH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
IH L+ A R + R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 62 IHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALN 121
Query: 170 IGLL---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWK 221
L PD V+YLDI P +R G +R E LEF + + ++ +++D
Sbjct: 122 DNFLNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRTRKVFKDLVKDLDNA 181
Query: 222 I-IDACQSIEDVEKQLKEIVLDQ 243
I IDA +SI++VEKQ+ ++LD+
Sbjct: 182 IEIDAAKSIQEVEKQIY-LILDK 203
>gi|307709124|ref|ZP_07645583.1| thymidylate kinase [Streptococcus mitis SK564]
gi|307620070|gb|EFN99187.1| thymidylate kinase [Streptococcus mitis SK564]
Length = 212
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SIGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ +
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLTR 212
>gi|336121123|ref|YP_004575898.1| Thymidylate kinase [Methanothermococcus okinawensis IH1]
gi|334855644|gb|AEH06120.1| Thymidylate kinase [Methanothermococcus okinawensis IH1]
Length = 195
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
+V EG+D GKT+Q L + G + +G++I LS + +
Sbjct: 3 NKFIVFEGIDGSGKTTQSKLLAEKINGK------YTCEPTNGDIGKLIRDILSGKK-CEK 55
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R E +E LK T ++ DRY YS + + + +GID+ +
Sbjct: 56 ETLALLFAADRVEHVVDIEQHLKK-THIVCDRYVYSSMVYQAIQGIDLNFIMNINQFAKK 114
Query: 175 PDSVLYLDIPPEKAAER-GGYGGERYEHLEFQRKV-AQCYQMLRDSSW-------KIIDA 225
PD +++LD+ E++ +R G E +E+ E KV A+ Y++++ + KI
Sbjct: 115 PDILIFLDVDVEESFKRMNGKNKEIFENKEMLNKVRAKYYEIIKKRLFEPKYGYIKINTT 174
Query: 226 CQSIEDVEKQL 236
+SIE+V +
Sbjct: 175 GKSIEEVHDNI 185
>gi|158319119|ref|YP_001511626.1| dTMP kinase [Alkaliphilus oremlandii OhILAs]
gi|158139318|gb|ABW17630.1| dTMP kinase [Alkaliphilus oremlandii OhILAs]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
+G + +EG D GK++Q + +LE G+ V L R P T +G+ I + +++H
Sbjct: 3 KGLFITIEGPDGSGKSTQIHFIKRFLEEKGYKVVLTREPGGTV-IGEKIRELVLDKNHKE 61
Query: 112 LDDHTIHLLFSANRWEKRSM-MEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA-- 167
+ + T LL++A+R + + + ++ G+ ++ DR+ S + + +G+ +E +
Sbjct: 62 MANVTEALLYAASRAQHVAQRIIPAIEEGSIVLCDRFVDSSIVYQGKGRGLGVENIRDIN 121
Query: 168 --PEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQMLRD---S 218
+G L PD + LDI PE ER E E ++F R V Y+ L
Sbjct: 122 DFATMG-LKPDLTILLDIDPEIGIERAKSAKEADRLEQEKIDFHRIVYDGYKELVQMYPE 180
Query: 219 SWKIIDACQSIEDVEKQLKEIVLDQV 244
K++DA QSIE+V K + E +L+++
Sbjct: 181 RIKVVDANQSIEEVSKGI-EYILNKI 205
>gi|387759191|ref|YP_006066169.1| thymidylate kinase [Streptococcus pneumoniae INV200]
gi|419514491|ref|ZP_14054118.1| thymidylate kinase [Streptococcus pneumoniae England14-9]
gi|301801780|emb|CBW34491.1| thymidylate kinase [Streptococcus pneumoniae INV200]
gi|379637587|gb|EIA02140.1| thymidylate kinase [Streptococcus pneumoniae England14-9]
Length = 212
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R R E L +KV + Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLVLHKKVRKGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|417940393|ref|ZP_12583681.1| dTMP kinase [Streptococcus oralis SK313]
gi|343389274|gb|EGV01859.1| dTMP kinase [Streptococcus oralis SK313]
Length = 212
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S +A+ +G++ I+
Sbjct: 61 QMDPKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLNIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E R R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEAGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDRMGLAK 212
>gi|56478513|ref|YP_160102.1| thymidylate kinase [Aromatoleum aromaticum EbN1]
gi|56314556|emb|CAI09201.1| Thymidylate kinase [Aromatoleum aromaticum EbN1]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ EG+D GK+SQ + +++ LE G VE R P T ++ L HL+
Sbjct: 10 FITFEGIDGAGKSSQIAAVVALLEARGLCVEQTREPGGTALGERLRELLLHEPMHLETEA 69
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL--- 172
+ L+F+A R + + L AG ++ DR+S + A+ +G+D A E +
Sbjct: 70 L-LMFAARREHLAARILPALAAGRWVVSDRFSDATYAYQVGGRGLDPAKFAALEAWVHPG 128
Query: 173 LAPDSVLYLDIPPEKAAER---GGYGGERYEHLE---FQRKVAQCYQMLR--DSSWKIID 224
PD L D+PPE AA R GG +R+E + F+R A + R +IID
Sbjct: 129 FQPDLTLVFDLPPEVAAARLAKGGAEPDRFEREQRDFFERVRAAYLERARMAPGRIRIID 188
Query: 225 ACQSIEDVEKQLKEIV 240
A + E + +++ IV
Sbjct: 189 AGGTAESIRAEVEAIV 204
>gi|389571492|ref|ZP_10161587.1| thymidylate kinase [Bacillus sp. M 2-6]
gi|388428892|gb|EIL86682.1| thymidylate kinase [Bacillus sp. M 2-6]
Length = 212
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHLD 113
G + EG + GKT+ ++ +E G++V R P Q+ L+ + + +D
Sbjct: 3 GMFITFEGPEGAGKTTVIRKVYEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKMD 62
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE-- 169
T LL++A R + + +E LK G T++ DR+ S +A+ A+G+ IE K+
Sbjct: 63 AKTEALLYAAARRQHLAEKVEPALKRGETVLCDRFVDSSLAYQGYARGLGIEEVKSINDF 122
Query: 170 -IGLLAPDSVLYLDIPPEKAAER--GGYGGER----YEHLEFQRKVAQCYQMLRDSS--- 219
I P +Y I PE+ +R G E+ E L+F + V + Y++L S
Sbjct: 123 AIDGTMPQMTIYFSITPEEGLKRIDANQGREKNRLDMETLKFHQMVREGYELLIAQSPER 182
Query: 220 WKIIDACQSIEDVEKQLKEIVLD 242
++++DA Q ++DV ++ +++ D
Sbjct: 183 FRVVDASQPVQDVFNEVFQLIQD 205
>gi|289167781|ref|YP_003446050.1| thymidylate kinase [Streptococcus mitis B6]
gi|288907348|emb|CBJ22185.1| thymidylate kinase [Streptococcus mitis B6]
Length = 212
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S +A+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I IDA +E V + K ++ D++
Sbjct: 179 KEGNRIVKIDASFPLEQVVETTKAVLFDRM 208
>gi|390457057|ref|ZP_10242585.1| thymidylate kinase [Paenibacillus peoriae KCTC 3763]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 44 SSLRIGN-IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMI 102
S + GN ++ +G + LEG D GKT+ RL ++E GH V R P + + I
Sbjct: 7 SGWKAGNDMNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGHPVITTREPG-GIEISEKI 65
Query: 103 SAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AK 158
+ + + +H +D T LL++A R + ++ ++ G ++ DR+ S + + A+
Sbjct: 66 RSIILDPAHTSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFAR 125
Query: 159 GIDIEWCKAPEIGLLA-----PDSVLYLDIPPEKAAER----GGYGGER--YEHLEFQRK 207
GI I+ + I A PD+ YLDI PE R G G +R E + F K
Sbjct: 126 GIGIDEVAS--INRFAVDDWEPDATFYLDIEPELGLARINASRGEGMDRLDMESISFHHK 183
Query: 208 VAQCY-QMLRDSSWK--IIDACQSIEDVEKQLKEIV 240
V + Y ++ R + I+DA + E VE+ LK+++
Sbjct: 184 VREAYLELARKYPERITIVDASPAPEQVEQVLKDLL 219
>gi|314937311|ref|ZP_07844653.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80]
gi|313654607|gb|EFS18357.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80]
Length = 205
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 55 GALVVLEGLDRCGKTS---QCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
A + EG + GKT+ Q ++LLS ++V R P S G+ I L + +
Sbjct: 2 AAFITFEGPEGSGKTTVLNQINKLLSE----NYNVISTREPG-GVSTGEEIRNILLDGEN 56
Query: 112 LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
+D T LLF+A+R E ++ A LK ++ DRY S +A+ A+GI IE K
Sbjct: 57 IDIRTEALLFAASRREHLVEKVIPA-LKNDKVVLCDRYIDSSLAYQGYARGIGIEEVKKI 115
Query: 169 E---IGLLAPDSVLYLDIPPEKAAER---GGYGGERY--EHLEFQRKVAQCYQMLRDSS- 219
I L PD +YLDI E ER R E L F +KV + Y+ L ++
Sbjct: 116 NEFAINGLYPDLTIYLDIDAEVGRERILKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175
Query: 220 --WKIIDACQSIEDVEKQLKEIVL 241
+K++DA QSIE V EI+L
Sbjct: 176 ERFKVVDATQSIESVISDTYEIIL 199
>gi|419759845|ref|ZP_14286130.1| thymidylate kinase [Thermosipho africanus H17ap60334]
gi|407514884|gb|EKF49670.1| thymidylate kinase [Thermosipho africanus H17ap60334]
Length = 201
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ EG+D GK++Q + L YL+ G V R P T ++ L N +++ +
Sbjct: 2 FIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIRDILLDNNLNINKRS 61
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE---IG 171
LLF A+R + +++ L+ G ++ DR+S S +A+ A+ I +E
Sbjct: 62 ELLLFLASRAQLVEEVIKPHLERGFFVLADRFSDSSIAYQGGARNIGVETVSTLNDFATD 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCY---QMLRDSSWKII 223
+ PD V Y+DIP + A ER + + LE F KV Y LRD+ + II
Sbjct: 122 NIYPDIVFYIDIPTKIAMER--LKDKNLDRLEKEGQIFLEKVRNTYLKLSKLRDNFF-II 178
Query: 224 DACQSIEDVEKQLKEIV 240
D +SI+ V ++K IV
Sbjct: 179 DGTKSIDSVFAEIKSIV 195
>gi|420247730|ref|ZP_14751123.1| thymidylate kinase [Burkholderia sp. BT03]
gi|398070445|gb|EJL61745.1| thymidylate kinase [Burkholderia sp. BT03]
Length = 206
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQC----SRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ RL L G SV + R P T +G+ + L +
Sbjct: 2 ARGKFITFEGIDGAGKTTHLGWFRDRLEQKLAPTGRSVVMTREPG-GTKLGESLRDILLH 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKA 167
QS + L+F+A R ++E L G ++ DR++ + A+ +G+ + +
Sbjct: 61 QSMDLETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDKLET 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+PPE A+ER +R+E F R + + ++
Sbjct: 121 LERWVQGGFQPDMTVLFDVPPETASERRSAARAPDRFESESDAFFTRTRTEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIVL 241
++ IID+ +SI +++K L+E+++
Sbjct: 181 YRFDIIDSTRSIAEIQKHLEELIV 204
>gi|390571732|ref|ZP_10251969.1| thymidylate kinase [Burkholderia terrae BS001]
gi|389936346|gb|EIM98237.1| thymidylate kinase [Burkholderia terrae BS001]
Length = 206
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQC----SRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ RL L G SV + R P T +G+ + L +
Sbjct: 2 ARGKFITFEGIDGAGKTTHLGWFRDRLEQKLAPTGRSVVMTREPG-GTKLGESLRDILLH 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKA 167
QS + L+F+A R ++E L G ++ DR++ + A+ +G+ + +
Sbjct: 61 QSMDLETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDKLET 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+PPE A+ER +R+E F R + + ++
Sbjct: 121 LERWVQGGFEPDMTVLFDVPPETASERRSAARAPDRFESESDAFFTRTRTEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIVL 241
++ IID+ +SI +++K L+E+++
Sbjct: 181 YRFDIIDSTRSIAEIQKHLEELIV 204
>gi|311065067|ref|YP_003971793.1| thymidylate kinase [Bifidobacterium bifidum PRL2010]
gi|310867387|gb|ADP36756.1| Tmk Thymidylate kinase [Bifidobacterium bifidum PRL2010]
Length = 250
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT---SVGQMISAYL 106
+D G + EG+D GKT+Q RL YLE G V + R P T S+ Q++ L
Sbjct: 4 GVDMTGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLREL 63
Query: 107 SNQSHLDDHTI-----HLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSA--- 157
+ + D I L+F+A+R + + ++ L+ G +I DRY S +A+ +
Sbjct: 64 GDAAEADGTDIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQAGGRE 123
Query: 158 -KGIDIEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQM 214
D+ G L P LD+ P A R + +R E EFQ++ Q +
Sbjct: 124 LTADDVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQHDADRMESAGDEFQQRTRQAFLD 183
Query: 215 L---RDSSWKIIDACQSIEDVEKQLK 237
L +++IDA IE V + +K
Sbjct: 184 LAGHEPGRFRVIDAAWPIEAVWEHIK 209
>gi|406909095|gb|EKD49424.1| Thymidylate kinase [uncultured bacterium]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQ--- 109
+G L+V+EG D GKT+Q L+ L+ G FP T G +I YL+N+
Sbjct: 8 KGKLIVIEGTDGSGKTTQFKLLIKRLKEEGFKTSSMSFPRHNTPFFGLLIDRYLNNEFGK 67
Query: 110 -SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI------ 162
+ + +L++A+RWE R + LK G +++DRY S + K D+
Sbjct: 68 ADEVSPYLASVLYAADRWEVRDKLMHSLKLGKIVVLDRYVESNLGHQGGKIQDVSKRKKL 127
Query: 163 -EWCKAPEIGLL---APDSVLYLDIPPEKAAERGGYGGERY--------EHLEFQRKVAQ 210
+W + + PD V+YL +P + + G ++Y E++ K +
Sbjct: 128 LKWLGDLDYKVFKNPKPDLVIYLSVPSKFSVRLAGKLSKKYKKTSYDGLENIGHLTKARK 187
Query: 211 CYQMLRDSS--WKIIDACQ 227
++ L S WK I+ +
Sbjct: 188 VFEALASSKQYWKKINCVE 206
>gi|300172669|ref|YP_003771834.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811]
gi|299887047|emb|CBL91015.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811]
Length = 214
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGL-GHSVELWRFPDRTTSVGQMISAYL--SNQSHLD 113
+ EG + GKTS L+S L+ L G + R P + + I A L + + +D
Sbjct: 6 FITFEGPEGAGKTSVLEILISELKPLLGDELITTREPG-GNPISEAIRAILQPAEDNGMD 64
Query: 114 DHTIHLLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEW--CKA 167
+ T LL++A R + ++ LK+G +I DRY S +A+ G+D W +
Sbjct: 65 ERTEALLYTAARRQHLVEIILPALKSGKVVISDRYIDSSLAYQGGGRGLGVDNIWQINQF 124
Query: 168 PEIGLLAPDSVLYLDIPPE------KAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS- 219
GL+ PD +Y D+PPE KA +G E+L F + V Q Y Q+ D S
Sbjct: 125 ATEGLM-PDLTIYFDVPPELGLARVKANRQGKIDRLDKENLSFHQTVRQTYLQLQHDFSD 183
Query: 220 -WKIIDACQSIEDVEKQLKEIVLDQVTACKKG 250
KIIDA QS++ V +E++L + +KG
Sbjct: 184 RIKIIDAAQSLDQVVADTRELLL-KTLKTRKG 214
>gi|163867844|ref|YP_001609048.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
gi|161017495|emb|CAK01053.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
Length = 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 9/191 (4%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G+ VVL G D GKT+Q + Y H ++ ++ P Q + YL + +D
Sbjct: 19 GSFVVLCGFDGSGKTTQVQEISRYWAQEKHIIQTFQ-PSHWYRNNQEVRDYLESGKSIDP 77
Query: 115 HTIHLLFSANRWEKR-SMMEAKLKAGTTLIV-DRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ LL + +R + ++E L + I+ DRY YS +A+ A+G+ +E +
Sbjct: 78 LLLALLAATDRRKHTLEIIEPSLTSSQNFIISDRYVYSSLAYFYARGLSLESVIKLNQFI 137
Query: 173 LAPDSVLYLDIPP----EKAAERGGYGGERYEHLEFQRKVAQCYQMLR--DSSWKIIDAC 226
P YL +PP E+ +R G + E L F KV + YQ+L D + +ID
Sbjct: 138 PRPCITFYLHLPPTAIIERLQKRDGLALKYEEKLSFIEKVYEVYQLLSEIDERFIVIDGT 197
Query: 227 QSIEDVEKQLK 237
SI + Q++
Sbjct: 198 ASISSIHNQVR 208
>gi|435851853|ref|YP_007313439.1| thymidylate kinase [Methanomethylovorans hollandica DSM 15978]
gi|433662483|gb|AGB49909.1| thymidylate kinase [Methanomethylovorans hollandica DSM 15978]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G L+ LEG+D GK++ C RLL + LG ++ T+ G ++ L + +
Sbjct: 2 KGKLITLEGIDGSGKSTIC-RLLQ--DDLGFEGCIFTREPTTSWFGDAVNRALRSDT--- 55
Query: 114 DHTIHL-LFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-----EWCK 166
DH L LF A+ + S ++ L+ G +I DRYS S A+ A DI +W +
Sbjct: 56 DHIAELMLFLADHADHISRLIRPSLENGDNIISDRYSASRCAYQGATLQDIFEDPLDWVR 115
Query: 167 APEIG-LLAPDSVLYLDIPPEKAAERGGYGGER--YEHLEFQRKVAQCYQML---RDSSW 220
G + PD ++ DI PE A +R G GER +E +EF +KV Y L +
Sbjct: 116 FLHKGWTIDPDLIILFDIDPEVAVKRCGDRGERSKFEKMEFLKKVRSNYLRLAAEEPGRF 175
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTACKK 249
+++A + + +V++++ I+ V K
Sbjct: 176 VVVNADRPLNEVQEEVFRIIAHAVGTGNK 204
>gi|337287768|ref|YP_004627240.1| Thymidylate kinase [Thermodesulfobacterium sp. OPB45]
gi|334901506|gb|AEH22312.1| Thymidylate kinase [Thermodesulfobacterium geofontis OPF15]
Length = 392
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 9/186 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SH 111
+G L+ +EG+D GKT+ L L+ G + ++ + G+ I + L +
Sbjct: 190 KGKLIAIEGIDGAGKTTFAKALFETLKKRGINC-IFSCEPTSGPFGEKIKSALIKKIKKE 248
Query: 112 LDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-EWCKAPE 169
+ + LLF +R W +++ L+A +I+DRY S +A+ S++G+ + E E
Sbjct: 249 SNPQDLKLLFLKDRKWHVENIIIPALEAQKWIILDRYYPSTLAYQSSQGLSLKELLIENE 308
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCYQM-LRDSSWKIIDA 225
PD V+YLD+P E A +R G ++ +E EF +V + Y+ L+ ++ IIDA
Sbjct: 309 TIAPIPDLVIYLDLPLEIAFKRIGNREKKLTIFEKREFLERVMETYKKCLKLFNYLIIDA 368
Query: 226 CQSIED 231
+ IE+
Sbjct: 369 TKPIEE 374
>gi|417092664|ref|ZP_11957280.1| thymidylate kinase [Streptococcus suis R61]
gi|353532343|gb|EHC02015.1| thymidylate kinase [Streptococcus suis R61]
Length = 212
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG D GKT+ +LL L+ LG V R P ++ + I + N ++ +
Sbjct: 4 GFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPG-GVAIAEEIRNIILNPANTAM 62
Query: 113 DDHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE---WCKA 167
DD T LLF +A R + + L G L++DR+ S +A+ +G+DI+ W
Sbjct: 63 DDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIDDIHWLNQ 122
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRDSSW 220
L PD LY DI E+ R +R E + R+V Q Y ML
Sbjct: 123 FATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDMEKADMHRRVRQGYLSMLEQEPE 182
Query: 221 KI--IDACQSIEDVEKQLKEIVLDQVTACKK 249
+ IDA Q +E V V D + KK
Sbjct: 183 RFVKIDASQPLEAV-------VADALAVIKK 206
>gi|334133895|ref|ZP_08507431.1| hypothetical protein HMPREF9413_4815 [Paenibacillus sp. HGF7]
gi|333608526|gb|EGL19822.1| hypothetical protein HMPREF9413_4815 [Paenibacillus sp. HGF7]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
++ + GLD+ GK +Q L L G+ V F T G++I +L + + T
Sbjct: 8 IISIGGLDKSGKHTQSKLLAERLRSEGYKVMQSEFHRYDTPTGELIMKWLRKEWGVSAET 67
Query: 117 IHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
I L+ +A++ ++ E + + LI+DRY VA+ A G D W + + P
Sbjct: 68 IELIMAADKQAQQDWFTELENEEYEFLILDRYRLCQVAYGLANGRDGRWIMELQKYMRKP 127
Query: 176 DSVLYLDIPPEKAAERGGYGGE--RYE-HLEFQRKVAQCYQMLRDSSW----KIIDACQS 228
D + +DIP E++ +R G GE RYE L +V Y+ + + I+D S
Sbjct: 128 DLDIVIDIPAEESMKRKGKHGENDRYESDLGLLTRVRSYYKNVSTNYAAPIKAIVDGLGS 187
Query: 229 IEDVEKQLKEIVLDQ 243
E++ + +++IV+++
Sbjct: 188 FEEIHEAIRKIVVEE 202
>gi|417923272|ref|ZP_12566741.1| dTMP kinase [Streptococcus mitis SK569]
gi|418967463|ref|ZP_13519126.1| dTMP kinase [Streptococcus mitis SK616]
gi|342837076|gb|EGU71275.1| dTMP kinase [Streptococcus mitis SK569]
gi|383344076|gb|EID22246.1| dTMP kinase [Streptococcus mitis SK616]
Length = 212
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R R E L+ +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSNREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ +++ K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFERMDLDK 212
>gi|418476046|ref|ZP_13045397.1| integral membrane protein with kinase activity, partial
[Streptomyces coelicoflavus ZG0656]
gi|371543330|gb|EHN72139.1| integral membrane protein with kinase activity, partial
[Streptomyces coelicoflavus ZG0656]
Length = 869
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+ G + LEG D GK++Q L ++ G GH V L R P T VG+ + + L + S
Sbjct: 507 ANGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPG-ATPVGKRLRSILLDVSSA 565
Query: 112 -LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L LL++A+R E +++ L+ G ++ DRY S VA+ A G D+ +
Sbjct: 566 GLSHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGA-GRDLSPTEIAR 624
Query: 170 IGLLAPDSV-----LYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS--- 219
I A D + + LD+ PE A ER +R E EF +V + L +
Sbjct: 625 INRWATDGLVPHLTVLLDVAPEAARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGR 684
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQV 244
+ ++DA Q E V ++ LDQV
Sbjct: 685 YLVVDAGQEPEAVTTAVRH-RLDQV 708
>gi|220932870|ref|YP_002509778.1| dTMP kinase [Halothermothrix orenii H 168]
gi|254808299|sp|B8CZT1.1|KTHY_HALOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|219994180|gb|ACL70783.1| dTMP kinase [Halothermothrix orenii H 168]
Length = 207
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 15/197 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-L 112
RG + LEG++ GK++Q L L+ G V + R P T +G+ I L + + +
Sbjct: 2 RGLFITLEGIEGSGKSTQIEMLYKRLKKDGFDVIITREPG-GTPIGKEIRKLLLDPDNIM 60
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEI 170
LL++A+R + +++ L++G ++ DR+ S +A+ +G+DI+ K
Sbjct: 61 GAKAEFLLYAADRAQHVVELIKPALESGKVVLADRFIDSSIAYQGYGRGLDIDVVKTVNE 120
Query: 171 GLLA---PDSVLYLDIPPEKAAERG-GYG----GERYEH--LEFQRKVAQCY-QMLRDSS 219
++ PD LD+ EK ER GY G+R E + F R+V Q Y Q+ D
Sbjct: 121 WVIDGCWPDLTFVLDLDVEKGLERARGYSPDNQGDRLERELVTFHRRVRQAYHQLAEDRR 180
Query: 220 WKIIDACQSIEDVEKQL 236
+ ++DA +S E++ +++
Sbjct: 181 FIMLDADRSREEIHREI 197
>gi|186475808|ref|YP_001857278.1| thymidylate kinase [Burkholderia phymatum STM815]
gi|229487611|sp|B2JGP7.1|KTHY_BURP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|184192267|gb|ACC70232.1| dTMP kinase [Burkholderia phymatum STM815]
Length = 206
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQC----SRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ RL + G SV + R P T +G+ + L +
Sbjct: 2 ARGKFITFEGIDGAGKTTHLGWFRDRLEQKVAPAGRSVVMTREPG-GTKLGESLRDILLH 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKA 167
++ + L+F+A R ++E L G ++ DR++ + A+ +G+ + +A
Sbjct: 61 EAMDLETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDKLEA 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+PP+ A+ER +R+E F R A+ + ++
Sbjct: 121 LERWVQGGFQPDLTVLFDVPPDTASERRSAARAPDRFESESDAFFARTRAEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIV 240
++ IID+ +SI D++KQL++++
Sbjct: 181 YRFAIIDSTRSIADIQKQLEDLI 203
>gi|449134181|ref|ZP_21769684.1| thymidylate kinase [Rhodopirellula europaea 6C]
gi|448887174|gb|EMB17560.1| thymidylate kinase [Rhodopirellula europaea 6C]
Length = 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ L+G+D GK+SQ L L G +V R P +T +G + A L + S L+
Sbjct: 24 GRLITLDGIDGVGKSSQIEILAERLRSEGRNVLCVRDPG-STDLGMKLRAMLLD-SDLEM 81
Query: 115 H--TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
H T +LF A+R E S + + L G T+I DR+ + V + S G +++ ++G
Sbjct: 82 HRRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGG-EVDAQTLWQLG 140
Query: 172 LLA-----PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCY-QMLRDSSW--K 221
LA PD L LD+P E + +R G +R E +++ KV Q + L ++
Sbjct: 141 RLACGGVQPDVTLLLDLPAEISMKRVGGEADRMESRGVDYMAKVRQAFLDELPNAGGHTH 200
Query: 222 IIDACQSIEDVEKQLKEIVL 241
+IDA +IE+V + + I L
Sbjct: 201 VIDASGTIEEVAETIAAIEL 220
>gi|385261063|ref|ZP_10039195.1| dTMP kinase [Streptococcus sp. SK140]
gi|385189462|gb|EIF36926.1| dTMP kinase [Streptococcus sp. SK140]
Length = 212
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS ++ LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAIIPILEDRGIEVLSTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 EMDPKTELLLYIASR--RQHLVEKVLPALVAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ RKV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDMESLDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+ +I IDA ++ V ++ ++++ D++
Sbjct: 179 KEANRIVKIDASLPLDQVIEKTQQLLFDRM 208
>gi|383649084|ref|ZP_09959490.1| thymidylate kinase [Streptomyces chartreusis NRRL 12338]
Length = 1106
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 34 SCTPFRMESSSSLRIGNIDSR-----GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL 88
S P R + +L G+ + G + LEG D GK++Q L ++ G GH V L
Sbjct: 483 SGVPLRQDLRDALLRGDDPEQAPAASGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVL 542
Query: 89 WRFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVD 145
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I D
Sbjct: 543 TREPG-ATPVGKRLRSILLDVSSEGLSHRAEALLYAADRAEHIDTVVRPALERGAVVISD 601
Query: 146 RYSYSGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYE 200
RY S VA+ A G D+ + I L P + LD+ PE A ER +R E
Sbjct: 602 RYIDSSVAYQGA-GRDLSPTEIARINRWATNGLVPHLTVLLDVAPETARERFTEAPDRLE 660
Query: 201 H--LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + L + + ++DA Q E V ++ LDQV
Sbjct: 661 SEPAEFHARVRAGFLTLAAADAGRYLVVDAGQEPEAVTTVIRH-RLDQV 708
>gi|421491436|ref|ZP_15938802.1| dTMP kinase [Streptococcus anginosus SK1138]
gi|400371538|gb|EJP24497.1| dTMP kinase [Streptococcus anginosus SK1138]
Length = 212
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G + LEG D GK+S L+ LE G + R P +V + I + + H
Sbjct: 2 SKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFITTREPG-GVAVAEKIRDVVLDPKHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFS----SAKGIDIE 163
+D+ T LL+ A+R ++ ++E L A G ++VDR+ S VA+ K +DI+
Sbjct: 61 EIDEKTELLLYIASR--RQHLVECILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVVDID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY-QML 215
W L PD LY DI E K+ ERG +R E +E+ R+V + Y +L
Sbjct: 119 WLNDFATDGLKPDLTLYFDIEAEEGLARIAKSKERGADRLDR-ESVEWHRRVREGYLSIL 177
Query: 216 RDSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
++ IDA Q +E V ++ +QV + +
Sbjct: 178 EKEPNRVRKIDASQPLEKVVADTLAVLAEQVESLR 212
>gi|413962674|ref|ZP_11401901.1| thymidylate kinase [Burkholderia sp. SJ98]
gi|413928506|gb|EKS67794.1| thymidylate kinase [Burkholderia sp. SJ98]
Length = 206
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCS----RLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ RL + +E GH V + R P T +G+ + L N
Sbjct: 2 ARGKFITFEGIDGAGKTTHLDWFRERLEAKVEPGGHRVVMTREPG-GTPLGETLRGILLN 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKA 167
Q + L+F+A R ++E L G ++ DR++ + A+ +G+ + +A
Sbjct: 61 QPMDLETEALLMFAARREHLAQVIEPALSRGDWVLSDRFTDATFAYQGGGRGLPRDKLEA 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+P + A+ER +++E F+R ++ + +S
Sbjct: 121 LERWVQGGFQPDLTVLFDVPTDTASERRSAARAPDKFESESEAFFERTRSEYLRRADESP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIV 240
+ I+D+ +SI+++ K+L+E++
Sbjct: 181 QRFFIVDSTRSIDEIRKKLEEVI 203
>gi|384133943|ref|YP_005516657.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339288028|gb|AEJ42138.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 213
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
+G L+ EG+D GKT+Q RL S+LE G V + R P T +G + A L + H
Sbjct: 3 KGLLITFEGIDGAGKTTQLLRLASWLEAQGLPVVVTREPG-GTRIGDAVRAILLDPRHQE 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPE 169
+ T LL++A+R + ++ L G ++ DR+ + +A+ A G+ W +A
Sbjct: 62 MAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEALN 121
Query: 170 ---IGLLAPDSVLYLDIPPEKA-----AERGGYGGERYEHLE--FQRKVAQCYQMLRDSS 219
+G L PD L+ + A A G G +R E + F +VA ++ L ++
Sbjct: 122 EYALGGLRPDLTLWFHLDWATARLRLRARAEGAGLDRIERRDEAFFERVADAFERLWRAA 181
Query: 220 ---WKIIDACQSIEDVEKQLKEIVLDQV 244
K IDA +S +D+E++++ +V + +
Sbjct: 182 PEMRKRIDASRSPDDIEQEIRALVWNLI 209
>gi|126695487|ref|YP_001090373.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9301]
gi|166223098|sp|A3PAJ7.1|KTHY_PROM0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|126542530|gb|ABO16772.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 212
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLG-----HSVELWRFPDRTTSVGQMISAYLSN 108
+G +V+EG+D CGKT+Q L +L G + R P + ++ L N
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPISGLLKKESKLITTREPGGSLLGKKLRRLILDN 61
Query: 109 QSHLDDHTIH--LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW 164
+ ++ LL+SA+R E S ++ L +I DR+S S +A+ + I++E
Sbjct: 62 NENNKPSSLAELLLYSADRAEHVSKIILPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121
Query: 165 CKAPEIGL---LAPDSVLYLDIPPEKAA-ERGGYGGERYEH--LEFQRKVAQCYQML-RD 217
K E + +PD +L+I PE++ R +R E + F +V + ++++ +
Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFRRKNEIPDRIESEGIRFLERVNEGFKLIAKQ 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
+WK+I A Q+I+ + Q+KE +L+ + K
Sbjct: 182 KNWKVISASQNIKTISNQIKETLLNNFSNAK 212
>gi|78188893|ref|YP_379231.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
gi|123579949|sp|Q3AS37.1|KTHY_CHLCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78171092|gb|ABB28188.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
Length = 222
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GK++Q ++L++YL+ + R P T + + S L N+ +
Sbjct: 2 LITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLDNRKSITPIA 61
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK---APEIG 171
LLFSA+R E +++ L G T+I+DR+ S A+ +GI +E A G
Sbjct: 62 ELLLFSASRAELVETLIRPALAEGKTVILDRFFDSTTAYQGHGRGISLEQLHSIIALSTG 121
Query: 172 LLAPDSVLYLDIPPEKAAERG 192
L PD YLD+ PE+A R
Sbjct: 122 DLLPDVTFYLDLEPEEALRRA 142
>gi|169616051|ref|XP_001801441.1| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15]
gi|160703101|gb|EAT81696.2| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15]
Length = 105
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 162 IEWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RD 217
+EWC+ P++GL PD ++LDI + AA+RGGYG E+YE E Q +V + ++ L
Sbjct: 3 LEWCRKPDVGLPRPDLCVFLDISADDAAKRGGYGTEKYEKKEMQDRVRELFETLMGRKEG 62
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
+ IDA S+E+V+K++K V
Sbjct: 63 EDFVRIDAGASLEEVQKKVKHEV 85
>gi|375149477|ref|YP_005011918.1| thymidylate kinase [Niastella koreensis GR20-10]
gi|361063523|gb|AEW02515.1| Thymidylate kinase [Niastella koreensis GR20-10]
Length = 209
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ LEG+D GK++Q L L GH V F +G++I L + D
Sbjct: 8 FIALEGIDGSGKSTQTKLLTEQLTNQGHKV-YSTFEPTNNQIGKLIRDILKGNTKADYRI 66
Query: 117 IHLLFSANRWEKRSMME----AKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW---CKAPE 169
I LF A+R + E KL G T+I+DRY +S A+ A +DI+W A
Sbjct: 67 IAGLFVADRLDHLLNEEYGIVKKLAEGYTVIMDRYYFSSYAYQGAH-MDIDWVIQANAMS 125
Query: 170 IGLLAPDSVLYLDIPPEKAAER 191
+L PD +++D+ PE + +R
Sbjct: 126 ASILRPDVNIFIDVAPEISMQR 147
>gi|220934998|ref|YP_002513897.1| dTMP kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219996308|gb|ACL72910.1| dTMP kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 218
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG + LEG + GK++Q L ++LE G + + R P T + + I L ++ H
Sbjct: 7 ARGRFITLEGAEGVGKSTQIQALQAFLESRGVPLLVTREPG-GTPLAERIRELLLSRDHP 65
Query: 113 DDHT---IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDI------ 162
H + L+F+A R+ + L+AGT ++ DR++ + A+ +G+D
Sbjct: 66 PMHPDTELLLMFAARAEHLRTRILPALEAGTWVLCDRFTDATYAYQGGGRGLDPARIAVL 125
Query: 163 -EWCKAPEIGLLAPDSVLYLDIPPEK--AAERGGYGGERYEH--LEFQRKVAQCY---QM 214
+W + P + PD L LD+ A RG +R+E ++F +V + Y
Sbjct: 126 EDWVQGP----VRPDLTLLLDVDVRTGLARARGRGEADRFEQEAMDFFERVREAYLARAR 181
Query: 215 LRDSSWKIIDACQSIEDVEKQLK 237
S ++IIDA QS+E V + L+
Sbjct: 182 AEPSRYRIIDAGQSLEAVTRDLQ 204
>gi|350564911|ref|ZP_08933718.1| thymidylate kinase [Peptoniphilus indolicus ATCC 29427]
gi|348664294|gb|EGY80800.1| thymidylate kinase [Peptoniphilus indolicus ATCC 29427]
Length = 204
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG + EG D CGKT+ +++ L + ++ R P T + + I ++ +N
Sbjct: 2 RGLFIAFEGPDGCGKTTIANKVYEKLSRRFNCLK-TREPG-GTEISEKIRDFILDNNNVE 59
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEWCK 166
+ T LL++A+R + ++E LK G +I +R+ S + + A+G+ ++
Sbjct: 60 MTSRTEALLYAASRAQHVEQLIEPALKMGKIVICERFIVSSLVYQGYARGLGERQVQEIN 119
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERG-GYGGERYE--HLEFQRKVAQCYQ-MLRDSSWKI 222
+G ++PD D+ + ER GG+R E EF KV + Y+ +++ + +
Sbjct: 120 DFAVGEVSPDITFLFDVKQNNSVERKLKAGGDRLELEKGEFHSKVREGYESLIKSGRYTV 179
Query: 223 IDACQSIEDVEKQLKEIVLDQV 244
IDA QS+E+V + +++L+++
Sbjct: 180 IDATQSVEEVFQNCMDVILERL 201
>gi|291455870|ref|ZP_06595260.1| dTMP kinase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|384196368|ref|YP_005582112.1| dTMP kinase [Bifidobacterium breve ACS-071-V-Sch8b]
gi|417941681|ref|ZP_12584963.1| Thymidylate kinase (dTMP kinase) [Bifidobacterium breve CECT 7263]
gi|291382279|gb|EFE89797.1| dTMP kinase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|333110379|gb|AEF27395.1| dTMP kinase [Bifidobacterium breve ACS-071-V-Sch8b]
gi|376167923|gb|EHS86736.1| Thymidylate kinase (dTMP kinase) [Bifidobacterium breve CECT 7263]
Length = 206
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G V EG+D GKT+Q RL +YLE G +V + R P T++G+ + L N+
Sbjct: 3 GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPG-GTALGKAVRQLLLHGVNEGA 61
Query: 112 LD--DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
D LLF+A+R + + + L+ G +I DRY S +A+ A G ++ +
Sbjct: 62 ADIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAY-QAGGRELTSEEIR 120
Query: 169 EIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCY---QMLRDS 218
+ + L PD LD+ P + R + +R E +FQ + Q + + +
Sbjct: 121 SLSMWATNNLLPDRTYLLDMDPTLSHNRLEHAEDRMESAGDDFQSRTRQAFLDLAAVEPN 180
Query: 219 SWKIIDACQSIEDV----EKQLKEI 239
+++IDA QSIE V E +KE+
Sbjct: 181 RFRVIDASQSIEQVWAAIEADIKEL 205
>gi|167747824|ref|ZP_02419951.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662]
gi|317473408|ref|ZP_07932702.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
gi|167653186|gb|EDR97315.1| dTMP kinase [Anaerostipes caccae DSM 14662]
gi|316899058|gb|EFV21078.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
Length = 216
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + +EG D GK++Q L YL G+ + + R P T + + I + N+ + +
Sbjct: 7 GIFITMEGPDGAGKSTQIDLLRVYLLQKGYDIIVCREPGGTV-ISEAIREVILNRDYKNM 65
Query: 113 DDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE- 169
T LL++A R + +++ L G +I DR+ S + A+G+ ++
Sbjct: 66 GHMTELLLYAAARAQLVEEVIQPALDQGKVVICDRFIESSAVYQGIARGLGVDLVYEVNR 125
Query: 170 --IGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RDSSWK 221
+G PD L LD+ E R E E LEF RKV + Y++L RD +
Sbjct: 126 FAVGNTMPDITLLLDVDAETGIGRKKQQAELDRMESEKLEFHRKVVEGYRLLAERDKNRM 185
Query: 222 I-IDACQSIEDVEKQLKEIVLDQVT 245
+ ID SIE++ +Q+K V D +T
Sbjct: 186 VKIDGRNSIEEIHRQIKVAVDDALT 210
>gi|162449104|ref|YP_001611471.1| thymidylate kinase [Sorangium cellulosum So ce56]
gi|161159686|emb|CAN90991.1| putative Thymidylate kinase [Sorangium cellulosum So ce56]
Length = 208
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL----D 113
+V EG+D G ++Q R ++L V + R P VG ++ L+++ L
Sbjct: 1 MVFEGIDGAGTSTQAERFAAHLRAARRMVHVTREPS-AGPVGALLRQVLTHRISLPGARQ 59
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS--------AKGIDIEW 164
+ LLFSA+R + + +E L+ G +I DRY S +A+ S G +EW
Sbjct: 60 AEIMALLFSADRLDHLGAEIEPLLRDGYVVISDRYDLSSLAYQSTTAGEDGAGSGAIVEW 119
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAE-RGGYGG--ERYEHLEFQRKVAQCY----QMLRD 217
+ L PD + +D+ PE A + R G GG E +E E Q ++A+ Y +++
Sbjct: 120 IRELNRHALRPDVTVVIDVAPEIAEKRRRGRGGAEELFEKTELQARLAEAYRRAEELVPG 179
Query: 218 SSWKIIDACQSIEDVEKQL 236
ID S+++V + +
Sbjct: 180 DRVIHIDGNGSVDEVARAI 198
>gi|291514468|emb|CBK63678.1| thymidylate kinase [Alistipes shahii WAL 8301]
Length = 228
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQ----SH 111
+VLEGLD GK++Q L L G E FP V G++I+ +L + +
Sbjct: 2 FIVLEGLDGAGKSTQIRMLRQLLAERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVNE 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIE-------W 164
+D + + LLF+ +R + A + G +++DRY YS V F AK E W
Sbjct: 62 VDPYLVALLFAGDRAAAGPQIRAWIAEGKAVVLDRYVYSNVGFQCAKLPAGERRDRLAQW 121
Query: 165 CKAPEIG---LLAPDSVLYLDIP----------PEKAAERGGYGGERYEH---LEFQRKV 208
E G L PD L+LD+P + +R G R H L+ QR+V
Sbjct: 122 ILDLEFGYNDLPRPDLSLFLDVPFAFTERKLTEVREGDDRDYLQGSRDIHEDALDLQRRV 181
Query: 209 AQCY--QMLRDSSWKIID 224
+ Y +D S +++D
Sbjct: 182 REVYLAAAAKDDSLRVVD 199
>gi|254168531|ref|ZP_04875375.1| thymidylate kinase [Aciduliprofundum boonei T469]
gi|197622586|gb|EDY35157.1| thymidylate kinase [Aciduliprofundum boonei T469]
Length = 197
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GK++ R+ +L LGH + L P TT +G+ + + + +
Sbjct: 2 FIVFEGIDGSGKSTIAKRIAEHLSSLGHKIFLTEEP-TTTWMGKDVRRAIEEEKNPLSQA 60
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-----GID--IEWCKAP- 168
LLF A+R E ++ L+ G +I DRY YS A+ A+ +D ++W +
Sbjct: 61 --LLFFADRAEHVEAIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLEGVY 118
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYGG--ERYEHLEFQRKVAQCYQMLRDS-SWKIIDA 225
E L PD V+ L I P + + E++E EF +V Y L D + ++D+
Sbjct: 119 EPMRLDPDMVILLKIEPRRGLDFVNTRDFKEKFEREEFLERVQDIYMALADKYGFFVVDS 178
Query: 226 CQSIEDVEKQLKEIV 240
+++ +V +++I+
Sbjct: 179 NRNLNEVYDDVRKII 193
>gi|415726336|ref|ZP_11470731.1| thymidylate kinase [Gardnerella vaginalis 00703Dmash]
gi|415729196|ref|ZP_11472387.1| thymidylate kinase [Gardnerella vaginalis 6119V5]
gi|388063285|gb|EIK85871.1| thymidylate kinase [Gardnerella vaginalis 00703Dmash]
gi|388064698|gb|EIK87225.1| thymidylate kinase [Gardnerella vaginalis 6119V5]
Length = 234
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+++G + EG+D GKT+Q L +L+ LG V + R P T +G+ + L + S+
Sbjct: 27 ENKGLFISFEGIDGVGKTTQVEALKKHLQSLGREVVVTREPG-GTDLGKSLREILLHGSY 85
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-------- 162
+ T LLF+A+R + + ++ L G +I DRY S +A+ A G ++
Sbjct: 86 VSSRTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAY-QAGGRELTMDDVRTL 144
Query: 163 -EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS 219
EW L P+ LD+ PE A ER +R E ++FQR+ + + L S
Sbjct: 145 SEWATDS----LWPNRTYLLDMQPEAAFERLHREQDRMESAGIDFQRRTREAFLDLAQES 200
Query: 220 ---WKIIDAC 226
++++DA
Sbjct: 201 ANRYRVLDAT 210
>gi|154508479|ref|ZP_02044121.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC
17982]
gi|153798113|gb|EDN80533.1| dTMP kinase [Actinomyces odontolyticus ATCC 17982]
Length = 270
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
+RG + EG D GK++Q + + E G V + R P T +G I + N
Sbjct: 3 ARGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPG-GTELGTEIRRLVQNGPED 61
Query: 112 LDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKA 167
+D T LL++A+R + +++ L+ G ++ DRY S +A+ A G+D
Sbjct: 62 VDARTEALLYAADRAYHVATVIAPALERGAVVLADRYIDSSLAYQGAARSLGVD------ 115
Query: 168 PEIGLLA--------PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRD 217
EIG L+ P LD+PPE A R +R E ++F +V Y L D
Sbjct: 116 -EIGSLSAWATRGLYPSLTFLLDLPPEVGARRRTDAPDRMERESMDFHERVRHEYLRLAD 174
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQ 243
+ +IDA ++++V +++ +++++
Sbjct: 175 AEPDRIVVIDAVGTVDEVFSEIRGVLVER 203
>gi|215275161|sp|P0C8F9.1|KTHY_ASFK5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 235
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++ K++Q RL + LE + V FP T G++I L+ +
Sbjct: 2 RGILIAIEGINGVEKSTQAIRLKNALENKRYDVIYLHFPSPNTDTGKLILDVLNKIVKMP 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ +R E + + A LK +IVDRY +SG+A++ A I I+
Sbjct: 62 SEQLHELFTKHRCEFTAEIAALLKLNYIVIVDRYIWSGLAYAQADRIMIDTKNT-----F 116
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKV 208
PD +L P + E+ + YE E Q +
Sbjct: 117 NPDYTFFLS-PNKSLNEKPLHLQRLYETEEKQEII 150
>gi|302559329|ref|ZP_07311671.1| dTMP kinase [Streptomyces griseoflavus Tu4000]
gi|302476947|gb|EFL40040.1| dTMP kinase [Streptomyces griseoflavus Tu4000]
Length = 854
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+ G + LEG D GK++Q L ++ GH V L R P T VG+ + + L + S
Sbjct: 507 ASGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPG-ATPVGKRLRSILLDVSSA 565
Query: 112 -LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L LL++A+R E +++ L+ G +I DRY S VA+ A G D+ +
Sbjct: 566 GLSHRAEALLYAADRAEHIDTVVRPALERGAVVITDRYIDSSVAYQGA-GRDLSPTEIAR 624
Query: 170 IGLLAPDSV-----LYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS--- 219
I A D + + LD+ PE A ER +R E EF +V + L +
Sbjct: 625 INRWATDGLVPHLTVLLDVAPETARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGR 684
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQV 244
+ ++DA Q E V ++ LDQV
Sbjct: 685 YLVVDAGQEPESVTTVIRH-RLDQV 708
>gi|54294285|ref|YP_126700.1| thymidylate kinase [Legionella pneumophila str. Lens]
gi|81601377|sp|Q5WWU9.1|KTHY_LEGPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|53754117|emb|CAH15590.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens]
gi|307610103|emb|CBW99644.1| hypothetical protein LPW_14121 [Legionella pneumophila 130b]
Length = 212
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EGL+ GK++ + ++ L S R P T +G+++ + + N +
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-GTKIGEILRSIIKNPEYNNV 64
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
LDD + LL A R + +++ L G +I DR+ S +A+ + +D+
Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124
Query: 170 ---IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSW 220
+ PD LYLDI PE +A RG + E +EF ++ Y +L ++
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHRIHDTYHILVKQNPEI 184
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+IDA +S+E+V+ ++ ++
Sbjct: 185 MMIDANRSLEEVQSSIQSVI 204
>gi|377820691|ref|YP_004977062.1| dTMP kinase [Burkholderia sp. YI23]
gi|357935526|gb|AET89085.1| dTMP kinase [Burkholderia sp. YI23]
Length = 207
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCS----RLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ +L + LE GH V + R P T +G+ + L N
Sbjct: 2 ARGKFITFEGIDGAGKTTHLDWFRQQLAAKLEASGHQVVMTREPG-GTPLGETLRGILLN 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKA 167
Q + L+F+A R ++E L G ++ DR++ + A+ +G+ + +A
Sbjct: 61 QPMDLETEALLMFAARREHLAQVIEPALSRGDWVLSDRFTDATFAYQGGGRGLPRDKLEA 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+P + A+ER +++E F+R + + +S
Sbjct: 121 LERWVQGGFQPDLTVLFDVPTDTASERRSAARAPDKFESESEAFFERTRGEYLRRAEESP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIVLD 242
+ ++D+ + I D+ K+L+E + D
Sbjct: 181 QRFFVVDSSRPIADIRKKLEEALAD 205
>gi|339478434|gb|ABE94888.1| Thymidylate kinase [Bifidobacterium breve UCC2003]
Length = 223
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSHL 112
G V EG+D GKT+Q RL +YLE G +V + R P T++G+ + L +
Sbjct: 20 GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPG-GTALGKAVRQLLLHGVNEGA 78
Query: 113 DD---HTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
DD LLF+A+R + + + L+ G +I DRY S +A+ A G ++ +
Sbjct: 79 DDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAY-QAGGRELTSEEIR 137
Query: 169 EIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCY---QMLRDS 218
+ + L PD LD+ P + R + +R E +FQ + Q + + +
Sbjct: 138 SLSMWATNNLLPDRTYLLDMDPTLSHNRLEHAEDRMESAGDDFQSRTRQAFLDLAAVEPN 197
Query: 219 SWKIIDACQSIEDV----EKQLKEI 239
+++IDA QSIE V E +KE+
Sbjct: 198 RFRVIDASQSIEQVWAAIEADIKEL 222
>gi|52841629|ref|YP_095428.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|378777264|ref|YP_005185701.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|59798153|sp|Q5ZVP1.1|KTHY_LEGPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|52628740|gb|AAU27481.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508078|gb|AEW51602.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 212
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EGL+ GK++ + ++ L S R P T +G+++ + + N +
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-GTKIGEILRSIIKNPEYNNV 64
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
LDD + LL A R + +++ L G +I DR+ S +A+ + +D+
Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124
Query: 170 ---IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
+ PD LYLDI PE +A RG + E +EF ++ Y +L + +I
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHRIHDTYHILVKQNPEI 184
Query: 223 --IDACQSIEDVEKQLKEIV 240
IDA +S+E+V+ ++ ++
Sbjct: 185 IMIDANRSLEEVQSSIQSVI 204
>gi|312142724|ref|YP_003994170.1| thymidylate kinase [Halanaerobium hydrogeniformans]
gi|311903375|gb|ADQ13816.1| thymidylate kinase [Halanaerobium hydrogeniformans]
Length = 208
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG++ GK++Q L YL+ G V + R P T +G+ I L + +H +
Sbjct: 4 GFFITFEGIEGSGKSTQIKLLGDYLKKEGKEVVITREPG-GTELGKKIRQLLLDPAHEDM 62
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPEI 170
D T LL++A+R + + +++ LKAG +I DR++ S +A+ +A +G+D E
Sbjct: 63 DYRTEILLYTADRAQHFKDVIKPALKAGKVVISDRFADSNLAYQAAGRGLDYELVYKIND 122
Query: 171 GLLA---PDSVLYLDIPPEKAAERG-----GYGGERYEHL--EFQRKVAQCY-QMLRDSS 219
++ PD LD+ + +R G+R E F ++V + Y +M++
Sbjct: 123 WVIDSRWPDLTFVLDVAIAEGLKRARASSFDLNGDRLEREADSFHQRVRKAYLEMVKRDR 182
Query: 220 WKIIDACQSIEDVEKQLKEIV 240
+ ++D + E+V +++K I+
Sbjct: 183 FALVDGNLAEEEVHQEVKNII 203
>gi|309800190|ref|ZP_07694374.1| thymidylate kinase [Streptococcus infantis SK1302]
gi|308116178|gb|EFO53670.1| thymidylate kinase [Streptococcus infantis SK1302]
Length = 212
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS ++ LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEAIIPILEDRGIEVLSTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 EMDPKTELLLYIASR--RQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDKKAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E L+ RKV Q Y +L
Sbjct: 119 WLNEFATDGLKPDLTLYFDIEVEEGLARIAANSDREINRLDMEGLDLHRKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+ +I IDA ++ V ++++ D++
Sbjct: 179 KEADRIVKIDASLPLDQVIANTQQLLFDRM 208
>gi|21221961|ref|NP_627740.1| integral membrane protein with kinase activity [Streptomyces
coelicolor A3(2)]
gi|4539560|emb|CAB38479.1| integral membrane protein with kinase activity [Streptomyces
coelicolor A3(2)]
Length = 1089
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ G GH V L R P T VG+ + + L + S L
Sbjct: 509 GFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPG-ATPVGKRLRSILLDVSSAGL 567
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LL++A+R E +++ L+ G ++ DRY S VA+ A G D+ + I
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGA-GRDLSPTEIARIN 626
Query: 172 L-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
L P + LD+ PE A ER +R E EF +V + L + +
Sbjct: 627 RWATNGLVPHLTVLLDVAPEAARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGRYL 686
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q E V ++ LDQV
Sbjct: 687 VVDAGQEPEAVTTVVRH-RLDQV 708
>gi|289770846|ref|ZP_06530224.1| integral membrane protein with kinase activity [Streptomyces
lividans TK24]
gi|289701045|gb|EFD68474.1| integral membrane protein with kinase activity [Streptomyces
lividans TK24]
Length = 1107
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ G GH V L R P T VG+ + + L + S L
Sbjct: 509 GFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPG-ATPVGKRLRSILLDVSSAGL 567
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LL++A+R E +++ L+ G ++ DRY S VA+ A G D+ + I
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGA-GRDLSPTEIARIN 626
Query: 172 L-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
L P + LD+ PE A ER +R E EF +V + L + +
Sbjct: 627 RWATNGLVPHLTVLLDVAPEAARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGRYL 686
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q E V ++ LDQV
Sbjct: 687 VVDAGQEPEAVTTVVRH-RLDQV 708
>gi|255513737|gb|EET90002.1| dTMP kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 215
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GK++Q L SYL+ G + P + +G++I + ++ ++
Sbjct: 2 LIAFEGIDGSGKSTQAEMLDSYLKSSGIAAVTTAEPT-SGPIGKLIKEIVVSKKPINALA 60
Query: 117 IHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
+ +LF+A+R + + + + G +I DRY S +A+ +A GID + + P
Sbjct: 61 MQMLFTADRAYHLETTIMPSISEGKVIITDRYIGSTIAYGTAAGIDKRFLVGINRKFIPP 120
Query: 176 DSVLYLDIPPEKAAER 191
D +D P KA ER
Sbjct: 121 DITFVIDANPRKAVER 136
>gi|294630603|ref|ZP_06709163.1| thymidylate kinase [Streptomyces sp. e14]
gi|292833936|gb|EFF92285.1| thymidylate kinase [Streptomyces sp. e14]
Length = 822
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S G + LEG D GK++Q L ++ GH V L R P T VG+ + + L + S
Sbjct: 508 SSGFFIALEGGDGAGKSTQAEALADWIRAKGHEVVLTREPG-ATPVGKRLRSILLDVSSQ 566
Query: 112 -LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L LL++A+R E +++ L+ G +I DRY S VA+ A G D+ +
Sbjct: 567 GLSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGA-GRDLSPTEIAR 625
Query: 170 IGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS--- 219
I L P + LD+ PE A ER +R E EF +V + L +
Sbjct: 626 ISRWATNGLVPHLTVLLDVSPETARERFTEAPDRLESEPAEFHARVRAGFLALAAADPGR 685
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQV 244
+ ++DA Q E V ++ LDQV
Sbjct: 686 YLVVDAGQEPEAVTTVVRH-RLDQV 709
>gi|388456621|ref|ZP_10138916.1| thymidylate kinase [Fluoribacter dumoffii Tex-KL]
Length = 211
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G +V+EGL+ GK++ S +L LE R P T +G+++ + N +
Sbjct: 6 GKFIVIEGLEGAGKSTAISIILELLENRQIQTVTTREPGGTV-IGELLRDVIKNPKYHEI 64
Query: 112 LDDHT-IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IEWCK 166
LD+ + + LL++A +++ L+ G +I DR+ S +A+ +G+D I+
Sbjct: 65 LDNRSELLLLYTARIQLVEEVIKPALRQGIWVIADRFELSTMAYQGGGRGLDQEMIQRLS 124
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGE--RYEH--LEFQRKVAQCY--QMLRDSSW 220
+ + L PD LYLDI PE+ +R GE R E ++F +V Y + +DS+
Sbjct: 125 SFALEGLQPDLTLYLDISPEEGMKRVKLRGEFDRIEQQSIDFFHRVHASYINHVSKDSNA 184
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+IDA ++DV++ ++ ++
Sbjct: 185 VMIDARCPLDDVQRAIQHVM 204
>gi|339491218|ref|YP_004705723.1| thymidylate kinase [Leuconostoc sp. C2]
gi|338852890|gb|AEJ31100.1| thymidylate kinase [Leuconostoc sp. C2]
Length = 214
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLS-YLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SHLD 113
+ EG + GKTS ++L++ + + LG + R P + + I A L + + +D
Sbjct: 6 FITFEGPEGAGKTSVLNQLVAEFQQTLGDDLISTREPG-GNPISEAIRAILQPEEDNGMD 64
Query: 114 DHTIHLLFSANRWEKRSMMEA---KLKAGTTLIVDRYSYSGVAFSSAK---GIDIEW-CK 166
D T LL++A R ++ ++E LKAG +I DRY S +A+ G+D W
Sbjct: 65 DRTEALLYTAAR--RQHLVETVLPALKAGKVVISDRYVDSSLAYQGGGRGLGVDHIWQIN 122
Query: 167 APEIGLLAPDSVLYLDIPPE------KAAERGGYGGERYEHLEFQRKVAQCY---QMLRD 217
I L PD +Y D+P E KA +G E L F +KV + Y Q+
Sbjct: 123 QFAIDGLLPDLTIYFDLPSELGLARVKANRQGKIDRLDKESLAFHQKVRETYLELQVKFS 182
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQV 244
KI+DA QS+++V ++++L+++
Sbjct: 183 DRIKIVDATQSLDNVVDATRQLILERM 209
>gi|297171025|gb|ADI22039.1| thymidylate kinase [uncultured myxobacterium HF0200_05J13]
Length = 199
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++ + LEG+D G T+Q +R+ L G V P R +G I L +
Sbjct: 2 TKSQFIALEGIDGSGTTTQLTRIAEALTKRGRVVTQTMEPSR-GPIGTRIRDILRGEEKT 60
Query: 113 DDHTIHLLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
++ LLF+A+R + +R + A L+ G ++ DRY S +A+ S +++ + +
Sbjct: 61 PPDSLALLFAADRLDHLQREIAPA-LQRGEVVLSDRYLISSLAYQSLH-VELPFIEMINA 118
Query: 171 GLLAPDSVLYLDIPPEKAAE-RGGYGGER--YEHLEFQRKVAQCYQMLRDSS----WKII 223
PD + L I PE+AA+ R GGE ++ L+ Q K++Q Y S I+
Sbjct: 119 RARKPDVSILLKICPEEAAKRRATRGGEAEIFDDLDLQEKISQAYDKAFARSDLGPTAIV 178
Query: 224 DACQSIEDV 232
DA S+ DV
Sbjct: 179 DASASMSDV 187
>gi|296111513|ref|YP_003621895.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154]
gi|295833045|gb|ADG40926.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154]
Length = 214
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLS-YLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SHLD 113
+ EG + GKTS ++L++ + + LG + R P + + I A L + + +D
Sbjct: 6 FITFEGPEGAGKTSVLNQLVAEFQQTLGDDLISTREPG-GNPISEAIRAILQPEEDNGMD 64
Query: 114 DHTIHLLFSANRWEKRSMMEA---KLKAGTTLIVDRYSYSGVAFSSAK---GIDIEW-CK 166
D T LL++A R ++ ++E LKAG +I DRY S +A+ G+D W
Sbjct: 65 DRTEALLYTAAR--RQHLVETVLPALKAGKVVISDRYVDSSLAYQGGGRGLGVDHIWQIN 122
Query: 167 APEIGLLAPDSVLYLDIPPE------KAAERGGYGGERYEHLEFQRKVAQCY---QMLRD 217
I L PD +Y D+P E KA +G E L F +KV + Y Q+
Sbjct: 123 QFAIDGLLPDLTIYFDLPSELGLARVKANRQGKIDRLDKESLAFHQKVRKTYLELQVKFS 182
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQV 244
KI+DA QS+++V ++++L+++
Sbjct: 183 DRIKIVDATQSLDNVVDATRQLILERM 209
>gi|312796386|ref|YP_004029308.1| thymidylate kinase [Burkholderia rhizoxinica HKI 454]
gi|312168161|emb|CBW75164.1| Thymidylate kinase (EC 2.7.4.9) [Burkholderia rhizoxinica HKI 454]
Length = 218
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 54 RGALVVLEGLDRCGKTSQ----CSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
RG + EG+D GKT+ C RL G SV + R P T +G+ + L Q
Sbjct: 15 RGKFITFEGIDGAGKTTHLTWFCDRLSERAARQGASVIVTREPG-GTPLGEALRDILLRQ 73
Query: 110 S-HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDI----- 162
HL+ + L+F+A R +++E L G ++ DR++ + A+ +G+ I
Sbjct: 74 PMHLETEAL-LMFAARREHIAAVIEPTLARGDWVLSDRFTDATFAYQGGGRGLSIDKLQV 132
Query: 163 --EWCKAPEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYE----------HLEFQRKV 208
+W +A L PD + D+P E A+ R G +++E E+ R+
Sbjct: 133 LEQWVQAG----LQPDRTVLFDVPTETASARRGGARAPDKFESESDAFFARTRAEYLRRT 188
Query: 209 AQCYQMLRDSSWKIIDACQSIEDVEKQLKEIVL 241
AQ + + I+DA SI +V +QL+ I+L
Sbjct: 189 AQA-----PARFAIVDATCSIAEVREQLEAILL 216
>gi|296102884|ref|YP_003613030.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295057343|gb|ADF62081.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 213
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW-RFPDRTTSVGQMISAYLSNQSHL 112
R +V+EGL+ GKT+ + ++ L+ LG + ++ R P T ++ S L +S
Sbjct: 2 RSKYIVIEGLEGAGKTTARNVVIETLKTLGVADMVFTREPGGTQLAEKLRSLVLDIKSVG 61
Query: 113 D----DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
D D L+F A R + ++++ L AG +I DR+ S A+ +GID +
Sbjct: 62 DEVITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDQTMLA 121
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RD 217
+ +G PD LYLD+ PE +R GE E L+F + Y L +D
Sbjct: 122 TLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRTRARYLELASQD 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
SS + IDA QS+E+V + ++E V
Sbjct: 182 SSIRTIDATQSLEEVTRSIEETV 204
>gi|134297938|ref|YP_001111434.1| dTMP kinase [Desulfotomaculum reducens MI-1]
gi|172044205|sp|A4J0K6.1|KTHY_DESRM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|134050638|gb|ABO48609.1| thymidylate kinase [Desulfotomaculum reducens MI-1]
Length = 207
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSHLDD 114
+V EG+D GK++Q + L YL R P T VG+ I L N + + D
Sbjct: 5 FIVFEGVDGSGKSTQLNLLNKYLSQKEIKTICTREPG-GTPVGEKIRELLLDPNFAEIQD 63
Query: 115 HTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW-CKAPEI- 170
T LL+SA R + + ++ +L+ GT ++ DRY S +A+ +G+DI + + E+
Sbjct: 64 RTEALLYSAARAQLVAQVIRPQLEQGTVVLCDRYIDSTLAYQGYGRGMDISFLAQINELA 123
Query: 171 -GLLAPDSVLYLDIPPEKAAERG--GYGGERYEH--LEFQRKVAQCYQML---RDSSWKI 222
G L P+ + LD+PPE+ +R +R E+ L F KV Y + + ++ +
Sbjct: 124 SGGLMPNITILLDLPPEEGLQRSRKDRPADRLENESLTFYHKVRSGYLEMAKRKPDTYLV 183
Query: 223 IDACQSIEDVEKQL 236
+DA Q++E + +Q+
Sbjct: 184 LDARQTMEQLHRQI 197
>gi|386384414|ref|ZP_10069792.1| thymidylate kinase [Streptomyces tsukubaensis NRRL18488]
gi|385668125|gb|EIF91490.1| thymidylate kinase [Streptomyces tsukubaensis NRRL18488]
Length = 1103
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 6 SFTLSKALNFGALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGN-----IDSRGALVVL 60
+FTL A GAL + + L + P R + +LR G G + +
Sbjct: 486 AFTLMLA---GALLLPVAAIVLAKTDDRAGVPLRRDLGDALRRGADPQQATAPNGFFIAI 542
Query: 61 EGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--LDDHTIH 118
EG D GK++Q L ++ GH V + R P T VG+ + + L + S L
Sbjct: 543 EGGDGAGKSTQVEALARWIRDKGHEVVVTREPG-ATPVGKRLRSILLDVSSAGLTSRAEA 601
Query: 119 LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL----- 172
LL++A+R E S++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 602 LLYAADRAEHIGSVVRPALERGAVVITDRYIDSSVAYQGA-GRDLSPTEIARISRWATEG 660
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WKIIDACQ 227
L P + LD+ PE A ER +R E LEF ++V + L + + ++DA Q
Sbjct: 661 LVPHLTVLLDVSPETARERFTEAPDRLESEPLEFHQRVRSGFLTLAAADPARYVVVDAGQ 720
Query: 228 SIEDV 232
E V
Sbjct: 721 EPEAV 725
>gi|407472638|ref|YP_006787038.1| thymidylate kinase Tmk [Clostridium acidurici 9a]
gi|407049146|gb|AFS77191.1| thymidylate kinase Tmk [Clostridium acidurici 9a]
Length = 214
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + LEG D GK++ L SYL G V L R P T ++ L N++
Sbjct: 7 KGLFITLEGPDGSGKSTVSRMLASYLRERGLRVTLTREPGGTDISEKIRHIILDNKNTEI 66
Query: 114 DHTIH-LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE- 169
+T LL++A+R + S + + G +I DR+ S + + +G+ I+ K
Sbjct: 67 AYTTEALLYAASRAQHISEKIVPAIDDGRIIICDRFVLSSLVYQGIGRGLGIDSVKMIND 126
Query: 170 --IGLLAPDSVLYLDIPPEKAAERGGY--GGERYEH--LEFQRKVAQCYQMLRD---SSW 220
I + PD++L+ DI P+ A +R G+R E + F KV + Y+ L +
Sbjct: 127 FAIQGIEPDAILFFDINPKIALKRKTRKSKGDRLEKEDISFHEKVYKGYKHLTEIYSEKI 186
Query: 221 KIIDACQSIEDVEKQLKEIV 240
K+IDA +S E+V Q++ IV
Sbjct: 187 KVIDASKSKEEVFNQVRNIV 206
>gi|420143666|ref|ZP_14651163.1| Thymidylate kinase (dTMP kinase) [Lactococcus garvieae IPLA 31405]
gi|391856537|gb|EIT67077.1| Thymidylate kinase (dTMP kinase) [Lactococcus garvieae IPLA 31405]
Length = 209
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHLD 113
G L+ LEG D GKT+ R+L LE + + R P ++ + LS + + +D
Sbjct: 3 GILISLEGPDGAGKTTVLQRILPELEKTSYKILSTREPGGVRVAEEIRNIILSTENTEID 62
Query: 114 DHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS---AKGID-IEWCKAP 168
T +LF +A R ++ M L AG +IVDR+ S VA+ G++ + W
Sbjct: 63 SKTELMLFAAARRLHMQTKMLPALAAGEMVIVDRFIDSSVAYQGYGRELGVEPVNWLNEF 122
Query: 169 EIGLLAPDSVLYLDIPPEKAAER------GGYGGERYEHLEFQRKVAQCYQMLRDSS--- 219
L PD LY DI + A ER E E RKV Q Y + +
Sbjct: 123 ATDGLKPDLTLYFDIDTDVALERIMKNRADEVNRLDLERAEMHRKVRQGYLEIVNQEPER 182
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQVTACKK 249
+ IDA Q +L ++V D +T KK
Sbjct: 183 FVTIDASQ-------ELDKVVADTLTVIKK 205
>gi|384207683|ref|YP_005593403.1| thymidylate kinase [Brachyspira intermedia PWS/A]
gi|343385333|gb|AEM20823.1| thymidylate kinase [Brachyspira intermedia PWS/A]
Length = 203
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQ-----MISAYLSN 108
+G L+VLEG+D GK+S L L LG ++ F G M+S L
Sbjct: 2 KGKLIVLEGIDGSGKSSIGMMLTDALNSLGIK-SIYTFEPTHAYYGSKLRESMLSKDLKP 60
Query: 109 QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC-K 166
+ L LF A+R E + M++ + G +++DRY YS +A+ AKGID E+
Sbjct: 61 EEELS------LFIADRKEHIKHMIKPAINDGYVIVLDRYMYSSIAYQGAKGIDKEYIYN 114
Query: 167 APEIGLLAPDSVLYLDIPPEKA----AERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
+ +L PD V L + E A E+ G+ +R+E+ + +V + + S
Sbjct: 115 LHKDFILEPDLVFILHLNIETALNRIMEKRGF-VDRFENKHYLEEVDKVFYSFNASYIHH 173
Query: 223 IDACQSIEDVEKQL 236
IDA ++ E ++ ++
Sbjct: 174 IDASKTQESIKDEI 187
>gi|386586284|ref|YP_006082686.1| thymidylate kinase [Streptococcus suis D12]
gi|353738430|gb|AER19438.1| thymidylate kinase [Streptococcus suis D12]
gi|451937302|gb|AGF87605.1| putative thymidylate kinase [Streptococcus phage phiD12]
Length = 212
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG D GKT+ +LL L+ LG V R P ++ + I + N ++ +
Sbjct: 4 GFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPG-GVAIAEEIRNIILNPANTAM 62
Query: 113 DDHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE---WCKA 167
DD T LLF +A R + + L G L++DR+ S +A+ +G+DI+ W
Sbjct: 63 DDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIDDIHWLNQ 122
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRDSSW 220
L PD LY DI E+ R +R E + R+V Q Y +L
Sbjct: 123 FATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDMEKADMHRRVRQGYLNILEQEPE 182
Query: 221 KI--IDACQSIEDVEKQLKEIVLDQVTACKK 249
+ IDA Q +E V V D + KK
Sbjct: 183 RFVKIDASQPLEAV-------VTDALAVIKK 206
>gi|315425277|dbj|BAJ46945.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
gi|343484336|dbj|BAJ49990.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
Length = 200
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTI 117
+ +EG+D GKT+Q L L G V P +G +I L+ + ++ + +
Sbjct: 6 IAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPT-DGKIGGLIREALAKRVNMSEEVL 64
Query: 118 HLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDS 177
LLF+A+R R + + ++G ++ DR S +A+ SA W + PD
Sbjct: 65 ALLFAADRLTLREKIVSAKQSGVYVVSDRSVVSSLAYQSAALGLRNWVYEVNRFAVKPDI 124
Query: 178 VLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRD-SSWKIIDACQSIEDVEKQ 235
++Y+DI PE A +R +RYE++ F RKV Y ++L D ++D Q ++ V +
Sbjct: 125 IVYIDISPETALKRLRKKSQRYENMVFLRKVKNAYSRVLHDFRRVVVVDGEQPVDAVAET 184
Query: 236 LKE 238
+ E
Sbjct: 185 IVE 187
>gi|302388610|ref|YP_003824431.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
gi|302199238|gb|ADL06808.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
Length = 211
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + +EG D GKT+Q +++ YL+ G V R P T Q+ L +
Sbjct: 7 KGKFITIEGPDGAGKTTQAEKIVQYLKSKGKRVISTREPGGTALGEQLRKVLLDPEGSPV 66
Query: 114 DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDI-------EW 164
+ L+++A R + M+ L+ G T++ DR+ S +A+ A+GI I +W
Sbjct: 67 SNAEALIYAACRAQLLERMVIPALREGFTVVCDRFVDSSLAYQGWARGIGINRILQLNKW 126
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQMLRD--- 217
IG PD + LD+ P + R GG + E LEF +KV + Y +R+
Sbjct: 127 V----IGSYWPDITILLDVDPAVSLGR-LVGGRKDRLESEALEFHQKVREGYMKVREMFP 181
Query: 218 SSWKIIDACQSIEDVEKQL 236
+IIDA Q ++V +Q+
Sbjct: 182 DRIRIIDASQPADEVFRQI 200
>gi|154249383|ref|YP_001410208.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1]
gi|171769338|sp|A7HKW8.1|KTHY_FERNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|154153319|gb|ABS60551.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1]
Length = 197
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
V EG+D CGK++Q + L++YLE G R P T +G+ I L Q
Sbjct: 2 FVSFEGIDGCGKSTQVNLLVNYLEEKGIPYIKVREPG-GTHLGEKIRELLITQEMCARSE 60
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE---IG 171
+ LLF A+R + S+++ LK G +I DR+++S VA+ + + E K
Sbjct: 61 L-LLFLASRAQLVESVIKPALKNGKIVIADRFAHSSVAYQGCGRELGPETVKILNDFATD 119
Query: 172 LLAPDSVLYLDIPPEKAAER-GGYGGERYEH--LEFQRKVAQCYQML--RDSSWKIIDAC 226
PD V Y+D+P A ER +R E EF + CY + + ++ IID
Sbjct: 120 KTYPDIVFYIDVPVNVAMERMKNQHKDRIEKEGKEFWESIRNCYLKMAKENENFVIIDGT 179
Query: 227 QSIEDVEKQLKEI 239
++IE++ +++ ++
Sbjct: 180 RTIEEIHREIVKV 192
>gi|375306182|ref|ZP_09771483.1| thymidylate kinase [Paenibacillus sp. Aloe-11]
gi|375081769|gb|EHS59976.1| thymidylate kinase [Paenibacillus sp. Aloe-11]
Length = 229
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 44 SSLRIGN-IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMI 102
S + GN ++ +G + LEG D GKT+ RL +++ GH V R P + + I
Sbjct: 7 SGWKAGNDMNRKGIFITLEGGDGSGKTTMIQRLAKFMKEEGHPVITTREPG-GIEISEKI 65
Query: 103 SAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AK 158
+ + + +H +D T LL++A R + ++ ++ G ++ DR+ S + + A+
Sbjct: 66 RSIILDPAHTSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFAR 125
Query: 159 GIDIEWCKAPEIGLLA-----PDSVLYLDIPPEKAAER----GGYGGER--YEHLEFQRK 207
GI I+ + I A PD+ YLDI PE R G G +R E + F K
Sbjct: 126 GIGIDEVAS--INRFAVDDWEPDATFYLDIEPELGLARINASRGKGMDRLDMESISFHHK 183
Query: 208 VAQCY-QMLRDSSWK--IIDACQSIEDVEKQLKEIV 240
V + Y ++ R + I+DA + E VE+ LK+++
Sbjct: 184 VREAYLELARKFPERITIVDASPAPEQVEQVLKDLL 219
>gi|315427436|dbj|BAJ49042.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
gi|315427468|dbj|BAJ49072.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
Length = 200
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHTI 117
+ +EG+D GKT+Q L L G V P +G +I L+ + ++ + +
Sbjct: 6 IAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPT-DGKIGGLIREALAKRVNMSEEVL 64
Query: 118 HLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDS 177
LLF+A+R R + + ++G ++ DR S +A+ SA W + PD
Sbjct: 65 ALLFAADRLTLREKIVSAKQSGVYVVSDRSVVSSLAYQSAALGLRNWVYEVNRFAVKPDI 124
Query: 178 VLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRD-SSWKIIDACQSIEDVEKQ 235
++Y+DI PE A +R +RYE++ F RKV Y ++L D ++D Q ++ V +
Sbjct: 125 IVYIDISPETALKRLRKKSQRYENMVFLRKVKNAYSRVLHDFRRVVVVDGEQPVDAVAEA 184
Query: 236 LKE 238
+ E
Sbjct: 185 IVE 187
>gi|116623132|ref|YP_825288.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116226294|gb|ABJ85003.1| thymidylate kinase / thymidylate synthase [Candidatus Solibacter
usitatus Ellin6076]
Length = 259
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ EG D GKT+Q ++L+ GH V ++ + + + ++ A + +S L
Sbjct: 28 RGLLIAFEGPDGSGKTTQRKLFKNWLKSEGHEVVTTKW-NSSALIKPLVKARKAARS-LS 85
Query: 114 DHTIHLLFSAN-RWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
LL +A+ R+ + + L G ++ DRY ++ +A +A+G+D+ W L
Sbjct: 86 PEEFSLLHAADFRYRLETEILPALWQGQVVVADRYLFTALARDAARGMDLHWLLEVYRPL 145
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGER----YE--------------HLEFQRKVAQCYQM 214
PD V Y + PE + +R ER YE + F +V Q Y+
Sbjct: 146 FWPDLVFYFSVSPETSGKR--IAAERAPNFYEAGQDVTEIADPFQSYAHFIGRVIQEYEA 203
Query: 215 L-RDSSWKIIDACQSIEDVEKQLKEIVLDQV 244
L + + +DA QSI D +Q++E+ + V
Sbjct: 204 LAKVFRFVTVDAEQSIFDQHRQIRELFAEGV 234
>gi|387825245|ref|YP_005824716.1| thymidylate kinase [Francisella cf. novicida 3523]
gi|332184711|gb|AEE26965.1| Thymidylate kinase [Francisella cf. novicida 3523]
Length = 209
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGLD GK++ + + YLE + R P T ++ + L N+ D
Sbjct: 5 FIVIEGLDGAGKSTAINFVRKYLEQNSLAAIYTREPGGTKIAEELRNLVLHNKY---DEE 61
Query: 117 IH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
IH L+ A R + R+++ L+ G ++ DR+ +S +A+ +G+++ +A
Sbjct: 62 IHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALN 121
Query: 170 IGLL---APDSVLYLDIPPEKAAERGGYGG--ERYEH--LEFQRKVAQCYQ-MLRDSSWK 221
L PD V+YLDI P +R G +R E LEF + + ++ ++++S
Sbjct: 122 DNFLNGCEPDLVIYLDIDPMLGLQRAQKVGSPDRIEKAGLEFFNRTRKVFKDLVKESDNA 181
Query: 222 I-IDACQSIEDVEKQLKEIVLDQ 243
I IDA SI++VEKQ+ ++LD+
Sbjct: 182 IEIDAALSIQEVEKQIY-LILDK 203
>gi|407938835|ref|YP_006854476.1| thymidylate kinase [Acidovorax sp. KKS102]
gi|407896629|gb|AFU45838.1| thymidylate kinase [Acidovorax sp. KKS102]
Length = 225
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + EG+D GK+S L + G +V + R P T ++ L++
Sbjct: 5 GLFITFEGIDGAGKSSHIEGLAAAFRTQGRTVTVSREPGGTPLAEKLREMVLNDPMDALT 64
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDI----------E 163
++ L+F+A R R+++E L G ++ DR++ + A+ A +G D+ +
Sbjct: 65 ESL-LIFAARRDHLRNVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLGVLSTLERLAQ 123
Query: 164 WCKAPEIGLL-APDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCY---QML 215
APE L+ PD ++ D+ PE AAER G +R+E +EF R+VAQ Y
Sbjct: 124 TGLAPEANLMREPDLTVWFDLAPEVAAERLAGARVPDRFEAQPVEFFRRVAQGYADRAAA 183
Query: 216 RDSSWKIIDACQSIEDVEKQLKEIVLDQ----VTACKKGKP 252
+ +DA Q V +QL + + + + +G P
Sbjct: 184 APQRFARLDAAQDRHRVWQQLTSVFVRKGWLAIMVATQGGP 224
>gi|84489171|ref|YP_447403.1| thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
gi|121696579|sp|Q2NHE3.1|KTHY_METST RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|84372490|gb|ABC56760.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
Length = 195
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSHLDD 114
+VLEG+D GKT+Q +L +LE G SV+ P + +G++I L S +
Sbjct: 3 IVLEGIDGVGKTTQTEKLKEWLEKRGFSVKTIVEP-TDSDIGKIIREELLKPEATSDTNQ 61
Query: 115 HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+ LLF+A+R K + + K LI DR YS + + ++ I+ EW
Sbjct: 62 QMLALLFAADRLTLKDEINQVKNNQQKILISDRSFYSSITYQNSTTIEPEWIYKINKHTP 121
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI--IDACQSIED 231
PD + LDI ++A +R + +E+ EF K + Y L + I IDA + +
Sbjct: 122 RPDLTIILDIDEDEALKRCD-KIDTFENKEFLEKTRENYLKLVKTEKNIVKIDATPTEDV 180
Query: 232 VEKQLKEIVL 241
V+ +++ ++
Sbjct: 181 VQDEIRNQII 190
>gi|303233183|ref|ZP_07319856.1| dTMP kinase [Atopobium vaginae PB189-T1-4]
gi|302480768|gb|EFL43855.1| dTMP kinase [Atopobium vaginae PB189-T1-4]
Length = 207
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSHLDD 114
+ EG+D CGKT+Q RL+S G+ V R P TT + + I + + N S + +
Sbjct: 2 FITFEGIDGCGKTTQVKRLVSAFRRAGNKVVSLREPGGTT-ISEAIRSMVLNPAMSSMCN 60
Query: 115 HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEW-CKAPEIG 171
T LL+ A R + R ++E L ++ DRY+ S A+ +A+G+D E C+A E+G
Sbjct: 61 ETELLLYEAARAQLVREVIEPALARDVVVVCDRYADSTFAYQYAARGLDKELVCRANELG 120
Query: 172 L--LAPDSVLYLDIPPEKAAERG-GYGGERYEH--LEFQRKVAQCY 212
+ PD + LD+ + A R +R E EFQ +V Y
Sbjct: 121 SCGVVPDITIVLDMDVDTAYRRATAQSCDRLEQEGREFQTRVRNGY 166
>gi|330817241|ref|YP_004360946.1| thymidylate kinase [Burkholderia gladioli BSR3]
gi|327369634|gb|AEA60990.1| Thymidylate kinase [Burkholderia gladioli BSR3]
Length = 206
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQ----CSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ C +L + + G V R P TT +G+ + A L
Sbjct: 2 ARGKFITFEGIDGAGKTTHLAWFCEQLRAQVAASGRQVVQTREPGGTT-LGESLRAVLLE 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKA 167
Q+ + L+F++ R ++E L G ++ DR++ + A+ +G+ + +
Sbjct: 61 QAMDLETEALLMFASRREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLET 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAERGG--YGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+PPE A+ER G +++E F R A+ + ++
Sbjct: 121 LERWVQGGFQPDLTILFDVPPEVASERRGAARAPDKFEAESDAFFLRTRAEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIV 240
++ I+DA QSI +++QL+ ++
Sbjct: 181 YRFLIVDASQSIAQIQRQLEGVL 203
>gi|389856790|ref|YP_006359033.1| thymidylate kinase [Streptococcus suis ST1]
gi|353740508|gb|AER21515.1| thymidylate kinase [Streptococcus suis ST1]
Length = 212
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG D GKT+ +LL L+ LG V R P ++ + I + N ++ +
Sbjct: 4 GFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPG-GVAIAEEIRNIILNPANTAM 62
Query: 113 DDHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE---WCKA 167
DD T LLF +A R + + L G L++DR+ S +A+ +G+DI+ W
Sbjct: 63 DDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIDDIHWLNQ 122
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRDSSW 220
L PD LY DI E+ R +R E + R+V Q Y +L
Sbjct: 123 FATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDMEKADMHRRVRQGYLNILEQEPE 182
Query: 221 KI--IDACQSIEDVEKQLKEIVLDQVTACKK 249
+ IDA Q +E V V D + KK
Sbjct: 183 RFVKIDASQPLEAV-------VADALAVIKK 206
>gi|148358930|ref|YP_001250137.1| thymidylate kinase [Legionella pneumophila str. Corby]
gi|296106978|ref|YP_003618678.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy]
gi|166221751|sp|A5IBP1.1|KTHY_LEGPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|148280703|gb|ABQ54791.1| thymidylate kinase [Legionella pneumophila str. Corby]
gi|295648879|gb|ADG24726.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy]
Length = 212
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EGL+ GK++ + ++ L S R P T +G+++ + + N +
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-GTRIGEILRSIIKNPEYNNV 64
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
LDD + LL A R + +++ L G +I DR+ S +A+ + +D+
Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNEGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124
Query: 170 ---IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSW 220
+ PD LYLDI PE +A RG + E +EF ++ Y +L ++
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHRIHDTYHILVKQNPEI 184
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+IDA + +EDV+ ++ ++
Sbjct: 185 MMIDANRPLEDVQSSIQSVI 204
>gi|290475848|ref|YP_003468740.1| thymidylate kinase [Xenorhabdus bovienii SS-2004]
gi|289175173|emb|CBJ81976.1| thymidylate kinase [Xenorhabdus bovienii SS-2004]
Length = 213
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW-RFPDRT---TSVGQMISAYLSNQSHL 112
+V+EGL+ GKT+ ++ L+ G S ++ R P T + Q+I + +S
Sbjct: 5 FIVIEGLEGAGKTTAIRTVVETLKQYGISDLIFTREPGGTPLAEKLRQLIKQGVEGESLT 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IEWCKAP 168
+ + +L++A ++++ L+ GT ++ DR+ S A+ +GID + +
Sbjct: 65 NKAEVLMLYAARVQLVENVIKPALEKGTWVVGDRHDLSSQAYQGGGRGIDQKLMTSLRES 124
Query: 169 EIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKI 222
+G PD +YLD+PPE +A ERG E L+F + + Y L +D + K
Sbjct: 125 ALGDFYPDLTIYLDLPPEVGLQRARERGELDRIEKESLDFFHRTRERYLELVAQDDTIKK 184
Query: 223 IDACQSIEDVEKQLKEIVL 241
IDA Q +E V+ +++ +L
Sbjct: 185 IDATQPLEKVQGAIRQTLL 203
>gi|421742075|ref|ZP_16180224.1| thymidylate kinase [Streptomyces sp. SM8]
gi|406689514|gb|EKC93386.1| thymidylate kinase [Streptomyces sp. SM8]
Length = 1101
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ GH V + R P T +G+ + A L + S L
Sbjct: 508 GFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPG-ATPIGKRLRAILLDVSSAGL 566
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI- 170
LL++A+R E +++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 567 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGA-GRDLAPTEIARIS 625
Query: 171 ----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
G L P + LD+ PE A ER +R E F ++V + L + +
Sbjct: 626 RWATGGLVPHLTVLLDVSPETARERFTEAPDRLESEPAAFHQRVRAGFLTLAAADQDRYL 685
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q EDV ++ LDQ+
Sbjct: 686 VVDAGQQPEDVTTVVRH-RLDQL 707
>gi|359150387|ref|ZP_09183225.1| thymidylate kinase [Streptomyces sp. S4]
Length = 1092
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ GH V + R P T +G+ + A L + S L
Sbjct: 499 GFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPG-ATPIGKRLRAILLDVSSAGL 557
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI- 170
LL++A+R E +++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 558 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGA-GRDLAPTEIARIS 616
Query: 171 ----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
G L P + LD+ PE A ER +R E F ++V + L + +
Sbjct: 617 RWATGGLVPHLTVLLDVSPETARERFTEAPDRLESEPAAFHQRVRAGFLTLAAADQDRYL 676
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q EDV ++ LDQ+
Sbjct: 677 VVDAGQQPEDVTTVVRH-RLDQL 698
>gi|373853718|ref|ZP_09596517.1| Thymidylate kinase [Opitutaceae bacterium TAV5]
gi|372473245|gb|EHP33256.1| Thymidylate kinase [Opitutaceae bacterium TAV5]
Length = 224
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 20/197 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ LEG + CGK++Q +RL +++ LG V R P T +G+ + + + S D+
Sbjct: 10 GKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPG-GTEIGEQVRNIIVHNSKGDE 68
Query: 115 HTIH---LLFSANRWE-KRSMMEAKLKAGTTLIVDRY-----SYSGVAFSSAKGIDIEWC 165
T LLF+A+R + R ++ L G ++ DR+ Y GVA + A +
Sbjct: 69 MTAETELLLFAASRAQLVREVIAPALLRGEIVLSDRFLDSSTVYQGVARNLAMD-PVNLI 127
Query: 166 KAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERY--EHLEFQRKVAQCYQMLRDS- 218
+G + PD + +D+PP+ + +R +R E+++F KV + Y +L
Sbjct: 128 NQFAVGNVMPDLTIIIDVPPDVSLARIHQRASDLPDRMERENIDFYNKVREGYLLLAKGL 187
Query: 219 --SWKIIDACQSIEDVE 233
+ ++D Q+ ++VE
Sbjct: 188 PRKFLVVDGTQTEDEVE 204
>gi|167586965|ref|ZP_02379353.1| dTMP kinase [Burkholderia ubonensis Bu]
Length = 201
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 53 SRGALVVLEGLDRCGKTSQ----CSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ C RL L G G V + R P T +G+ + L N
Sbjct: 2 ARGRFITFEGIDGAGKTTHLEWFCERLQDKLAGAGRQVVVTREPG-GTQLGEKLREILLN 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKA 167
Q + L+F+A R ++E L G ++ DR++ + A+ +G+ + +A
Sbjct: 61 QPMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEA 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAERGGYG--GERYE----------HLEFQRKVAQCY 212
E G PD + D+ P+ A+ER G +++E E+ R+ A+
Sbjct: 121 LERWVQGGFQPDLTVLFDVAPQVASERRGAARMPDKFESESDAFFARTRGEYLRRAAEAP 180
Query: 213 QMLRDSSWKIIDACQSIEDVEKQLK 237
+ I+DA QSI ++ +QL+
Sbjct: 181 H-----RFAIVDATQSIPEIRRQLE 200
>gi|356927902|gb|AET42692.1| thymidylate kinase [Emiliania huxleyi virus 202]
Length = 326
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-- 109
+ +G + V+EG D GK SQ + L+ LE V+ FP ++ G +I L+ +
Sbjct: 103 EHKGRIFVIEGGDGAGKMSQTALLMQRLEREDFPVKTIDFPHNESNHGMLIREVLAGKYG 162
Query: 110 --SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI------- 160
++D + L++ NRW + +++ + G +I+DRY S +A+ A
Sbjct: 163 DLKNIDPFLLASLYAQNRWSVKHILDFWISRGYNIILDRYIISNIAYQGAHEYKNRGYIT 222
Query: 161 -DIEWCKAPEIGLLAPDSVLYLDIPPEKAAE-------RGGYGGERYEHLEFQRKVAQCY 212
IE + + L S +YLDIPP++A R ++ KV + Y
Sbjct: 223 KQIEQFENNILDLPCAHSTVYLDIPPDEATRAMQNDNTRASLDQNELAPDSYKEKVRKIY 282
Query: 213 --QMLRDSSWKIID 224
Q L ++ +ID
Sbjct: 283 LEQELETENYYVID 296
>gi|332796217|ref|YP_004457717.1| dTMP kinase [Acidianus hospitalis W1]
gi|332693952|gb|AEE93419.1| dTMP kinase [Acidianus hospitalis W1]
Length = 189
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ +EG+D GKT+ L +LE L T + ++I + D T
Sbjct: 2 LIAIEGIDGSGKTTLAKELKKWLENEKKKKVLLTAEPFTEEISKLIQE----EGWKDPVT 57
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLFSA+R + + K +I DRY YS +A+ SA GID W P+
Sbjct: 58 LTLLFSADRGVHVNWI-MKQNQYDIIITDRYYYSTIAYQSAMGIDKNWIIEVNKFFPKPE 116
Query: 177 SVLYLDIPPEKAAERGGYGGERY---EHLEFQRKVAQCYQML--RDSSWKIIDACQSIED 231
L LDIP E A R +++ E L +KV + Y + ++S KII++ ++ E+
Sbjct: 117 LTLLLDIPAEIAITRIK-KDDKFNFKEKLSLLKKVRENYLEITKNENSIKIINSTKTFEE 175
Query: 232 VEKQLKEIV 240
V + K V
Sbjct: 176 VLSEAKNYV 184
>gi|391228157|ref|ZP_10264364.1| thymidylate kinase [Opitutaceae bacterium TAV1]
gi|391223650|gb|EIQ02070.1| thymidylate kinase [Opitutaceae bacterium TAV1]
Length = 224
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 20/197 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ LEG + CGK++Q +RL +++ LG V R P T +G+ + + + S D+
Sbjct: 10 GKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPG-GTEIGEQVRNIIVHNSKGDE 68
Query: 115 HTIH---LLFSANRWE-KRSMMEAKLKAGTTLIVDRY-----SYSGVAFSSAKGIDIEWC 165
T LLF+A+R + R ++ L G ++ DR+ Y GVA + A +
Sbjct: 69 MTAETELLLFAASRAQLVREVIAPALLRGEIVLSDRFLDSSTVYQGVARNLAMD-PVNLI 127
Query: 166 KAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERY--EHLEFQRKVAQCYQMLRDS- 218
+G + PD + +D+PP+ + +R +R E+++F KV + Y +L
Sbjct: 128 NQFAVGNVMPDLTIIIDVPPDVSLARIHQRASDLPDRMERENIDFYNKVREGYLLLAKGL 187
Query: 219 --SWKIIDACQSIEDVE 233
+ ++D Q+ ++VE
Sbjct: 188 PRKFLVVDGTQTEDEVE 204
>gi|347520878|ref|YP_004778449.1| thymidylate kinase [Lactococcus garvieae ATCC 49156]
gi|343179446|dbj|BAK57785.1| thymidylate kinase [Lactococcus garvieae ATCC 49156]
Length = 209
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHLD 113
G L+ LEG D GKT+ R+L LE + + R P ++ + LS + + +D
Sbjct: 3 GILISLEGPDGAGKTTVLQRILPELEKTSYKILSTREPGGVRVAEEIRNIILSTENTEID 62
Query: 114 DHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS---AKGID-IEWCKAP 168
T +LF +A R ++ M L AG +IVDR+ S VA+ G++ + W
Sbjct: 63 SKTELMLFAAARRLHMQTKMLPALAAGEMVIVDRFIDSSVAYQGYGRELGVEPVNWLNEF 122
Query: 169 EIGLLAPDSVLYLDIPPEKAAER------GGYGGERYEHLEFQRKVAQCY-QMLRDSSWK 221
L PD LY DI + A ER E E RKV Q Y ++++ +
Sbjct: 123 ATDGLKPDLTLYFDIDTDVALERIMKNRADEVNRLDLERAEMHRKVRQGYLEIVKQEPER 182
Query: 222 I--IDACQSIEDVEKQLKEIVLDQVTACKK 249
IDA Q +L ++V D +T KK
Sbjct: 183 FVTIDASQ-------ELDKVVADTLTVIKK 205
>gi|326202926|ref|ZP_08192793.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
gi|325987003|gb|EGD47832.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
Length = 206
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + +EG D GKT+Q + +L+ G+ V L R P T + + I + + + D
Sbjct: 3 KGLFITVEGTDGSGKTTQIKLMEEFLKAAGNDVVLSREPG-GTEISETIRNLILDPGNKD 61
Query: 114 --DHTIHLLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW---CK 166
T LL++A R + ++ L++G +I DR+ S A+ +G+D++
Sbjct: 62 ISPLTEMLLYAAARAQHVFQVIRPSLESGKCVICDRFVDSSYAYQGCGRGVDLKTVADVN 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQ---MLRDSS 219
+ + PD +L+I P A ER G +R E ++F +V + Y+ +L
Sbjct: 122 RAAVDGVVPDITFFLNIDPRLAIERRIKSTGADRIEQEKMDFHMRVYEGYRKMALLYPDR 181
Query: 220 WKIIDACQSIEDVEKQLK 237
K IDA +SIE++ Q+K
Sbjct: 182 IKSIDASKSIEEISLQIK 199
>gi|345849032|ref|ZP_08802048.1| thymidylate kinase [Streptomyces zinciresistens K42]
gi|345639451|gb|EGX60942.1| thymidylate kinase [Streptomyces zinciresistens K42]
Length = 1072
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ G GH V L R P T VG+ + + L + S L
Sbjct: 509 GFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPG-ATPVGKRLRSILLDVSSAGL 567
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LL++A+R E +++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYVDSSVAYQGA-GRDLSPTEIARIN 626
Query: 172 L-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
LAP + LD+ P+ A ER +R E EF +V + L + +
Sbjct: 627 RWATNGLAPHLTVLLDVAPDIARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGRYL 686
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q E V ++ LDQ+
Sbjct: 687 VVDAGQEAEAVTTVVRH-RLDQL 708
>gi|407005356|gb|EKE21494.1| dTMP kinase [uncultured bacterium]
Length = 200
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G +V EGLD G+++Q S L YL+ G P +G +I A L+ Q L
Sbjct: 3 KGKFIVFEGLDGSGQSTQISLLEKYLKDKGIKFHTTSEPSGNL-LGGLIRAILTKQWKLS 61
Query: 114 DHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+ I LL++A+R S + ++ G +I RY +S AF S D+ W +
Sbjct: 62 NTGIQLLYAADRAHHLESEVWPAMEKGNHVISSRYFFSTFAFGSLDN-DLAWLEKINEKF 120
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQ---RKVAQCYQMLRDS----SWKIIDA 225
PD V ++ + P++ R R E E + +KV Y + S ++ ID
Sbjct: 121 PKPDLVFFIRVSPKECIRRIESSRFRKEFFEEEAKLKKVLSVYDKISKSKKYKNFYTIDG 180
Query: 226 CQSIEDVEKQLKEIV 240
+S+E++ ++ +I+
Sbjct: 181 ERSVEEIFAEISKII 195
>gi|440717685|ref|ZP_20898167.1| thymidylate kinase [Rhodopirellula baltica SWK14]
gi|436437305|gb|ELP30961.1| thymidylate kinase [Rhodopirellula baltica SWK14]
Length = 221
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+ L+G+D GK+SQ L L V R P +T +G + A L + S L+
Sbjct: 24 GRLITLDGIDGVGKSSQIEILAERLRSEDRKVLCVRDPG-STDLGMKLRAMLLD-SDLEM 81
Query: 115 H--TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
H T +LF A+R E S + + L G T+I DR+ + V + S G +++ ++G
Sbjct: 82 HRRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGG-EVDASTLWQLG 140
Query: 172 LLA-----PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCY-QMLRDSSWK-- 221
LA PD L LD+P E + +R G +R E +++ KV Q + L ++ +
Sbjct: 141 RLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYMAKVRQAFLDELPNAGGRTH 200
Query: 222 IIDACQSIEDVEKQLKEIVL 241
++DA +IE+V + + I L
Sbjct: 201 VVDASGTIEEVAETIAAIEL 220
>gi|374988617|ref|YP_004964112.1| putative thymidylate kinase [Streptomyces bingchenggensis BCW-1]
gi|297159269|gb|ADI08981.1| putative thymidylate kinase [Streptomyces bingchenggensis BCW-1]
Length = 1080
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 15/191 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G +V+EG D GKT+Q L ++ G GH V + R P T++G+ + + L + S +
Sbjct: 500 GFFIVVEGGDGAGKTTQVEALAEWIRGKGHEVVVTREPG-ATAIGKRLRSILLDVSSAGI 558
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LL++A+R E S++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 559 SHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYIDSSVAYQGA-GRDLAPTEIARIS 617
Query: 172 L-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
L P + LD+ PE A ER +R E EF ++V + L + +
Sbjct: 618 RWATNGLVPHLTVLLDVAPETARERFTEAPDRLESEPAEFHQRVRNGFLTLAAADPARYL 677
Query: 222 IIDACQSIEDV 232
++DA Q E V
Sbjct: 678 VVDAGQLPEAV 688
>gi|365097029|ref|ZP_09331377.1| dTMP kinase [Acidovorax sp. NO-1]
gi|363413650|gb|EHL20844.1| dTMP kinase [Acidovorax sp. NO-1]
Length = 225
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + EG+D GK+S L + G SV + R P T ++ L++
Sbjct: 5 GLFITFEGIDGAGKSSHIEGLAAAFRTQGRSVTVSREPGGTPLAEKLREMVLNDPMDALT 64
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCK------- 166
++ L+F+A R R+++E L G ++ DR++ + A+ A +G D+E
Sbjct: 65 ESL-LIFAARRDHLRNVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLEVLSILERLAQ 123
Query: 167 ---APEIGLL-APDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCY---QML 215
APE ++ PD ++ D+ PE AA R G +R+E +EF R+VAQ Y
Sbjct: 124 TGLAPEANMMREPDLTVWFDLAPEVAAGRLAGARVPDRFEAQPVEFFRRVAQGYADRAAA 183
Query: 216 RDSSWKIIDACQSIEDVEKQLKEIVLDQ----VTACKKGKP 252
+ +DA Q V +QL + + + + +G P
Sbjct: 184 APQRFARLDAAQDRHRVWQQLTSVFVRKGWLAIMVAAQGGP 224
>gi|408383315|ref|ZP_11180851.1| thymidylate kinase [Methanobacterium formicicum DSM 3637]
gi|407814020|gb|EKF84659.1| thymidylate kinase [Methanobacterium formicicum DSM 3637]
Length = 191
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD--- 114
+ LEG+D GK++Q L +LE G SV R P + VG++I L + D+
Sbjct: 3 ICLEGIDGSGKSTQLECLGKWLEKCGLSVTRIREP-TDSPVGRLIRKMLQDPGAQDEGFQ 61
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R + + K ++ DR YS +A+ +++ EW L
Sbjct: 62 RTLALLFAADRTLLMDTICKEEKMNRIVLSDRSFYSSLAYQNSE----EWIAQINQHALE 117
Query: 175 PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIEDVE 233
PD V+ LD+ E A R G + +E F V Q Y ++ + + +++A + V
Sbjct: 118 PDLVILLDLEIETALTR-CEGTDSFEEANFLESVRQKYLKLAQQHGFMVVNAGNGVNKVH 176
Query: 234 KQLKEIVLDQVTAC 247
+K IV ++ C
Sbjct: 177 SDIKRIVAPKLGMC 190
>gi|397667017|ref|YP_006508554.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
gi|395130428|emb|CCD08668.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
Length = 212
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EGL+ GK++ + ++ L S R P T +G+++ + + N +
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-GTRIGEILRSIIKNPEYNNV 64
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE 169
LDD + LL A R + +++ L G +I DR+ S +A+ + +D+
Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNEGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124
Query: 170 ---IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSW 220
+ PD LYLDI PE +A RG + E +EF ++ Y +L ++
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHRIHDTYHILVKQNPEI 184
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+IDA +S+E+V+ ++ ++
Sbjct: 185 MMIDANRSLEEVQSSIQSVI 204
>gi|374321369|ref|YP_005074498.1| thymidylate kinase (dTMP kinase) [Paenibacillus terrae HPL-003]
gi|357200378|gb|AET58275.1| thymidylate kinase (dTMP kinase) [Paenibacillus terrae HPL-003]
Length = 215
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
++ +G + LEG D GKT+ RL ++E G+ V R P + + I + + + +
Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGYPVVTTREPG-GIEISEKIRSIILDPA 59
Query: 111 H--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK 166
H +D T LL++A R + ++ ++ G ++ DR+ S + + A+GI +E
Sbjct: 60 HTSMDARTEALLYAAARRQHLVEKVKPAIEKGAIVLCDRFVDSSLVYQGFARGIGMEEVA 119
Query: 167 APEIGLLA-----PDSVLYLDIPPEKAAER----GGYGGER--YEHLEFQRKVAQCYQML 215
+ I A PD+ YLDI PE R G G +R E + F KV + Y L
Sbjct: 120 S--INRFAVDDWEPDATFYLDIEPELGLARIQASRGEGMDRLDMESISFHHKVREAYLEL 177
Query: 216 R---DSSWKIIDACQSIEDVEKQLKEIV 240
I+DA + E VE+ LK+++
Sbjct: 178 AHKFPERITIVDASPATEQVEEVLKDLL 205
>gi|253576904|ref|ZP_04854229.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843771|gb|EES71794.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 216
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
N ++G + LEG D GKT+ + L+ G + R P + + I + N
Sbjct: 2 NHQAKGLFITLEGGDGSGKTTVMREMERLLKEQGVNFISTREPG-GIEIAEKIREVILNP 60
Query: 110 SH--LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC 165
H +D T LL++A+R + + +E L+ G T++ DR+ S +A+ A+G+ I+
Sbjct: 61 QHTAMDARTEALLYAASRRQHLAEKVEPSLERGITVLCDRFLDSSLAYQGYARGLGID-- 118
Query: 166 KAPEIGLLA-----PDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQM 214
+ +I L A PD YLDI PE R G R E L F +KV + YQ+
Sbjct: 119 EVLKINLFATKGRFPDLTFYLDIEPEVGLARIAAGAGREVNRLDMESLHFHQKVREGYQI 178
Query: 215 LRD---SSWKIIDACQSIEDVEKQLK 237
L K IDA +S E+V +++
Sbjct: 179 LAGMYPERIKTIDASRSKEEVAAEIR 204
>gi|148264612|ref|YP_001231318.1| thymidylate kinase [Geobacter uraniireducens Rf4]
gi|146398112|gb|ABQ26745.1| thymidylate kinase [Geobacter uraniireducens Rf4]
Length = 227
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EG D G+++Q L YLEG GH+ T +VG + S +S + +
Sbjct: 18 GKLIVIEGADGSGRSTQMELLKDYLEGKGHA---------TVNVGLLRSTLVSEELNEAK 68
Query: 112 ----LDDHTIHLLFS---ANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
L + T L ++ A++ E R + +KAG ++ DRY Y+ +A +G D +W
Sbjct: 69 QGNVLGEITRSLFYATDFADQLENRII--PAMKAGFIVLADRYIYTLMARDIVRGADRDW 126
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAER 191
+A + PD V+YL + P + ER
Sbjct: 127 VRALYGIAVVPDLVIYLRVSPAQLVER 153
>gi|282901980|ref|ZP_06309878.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281193067|gb|EFA68066.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 216
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 16/205 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN---QSH 111
G L+V EG++ GKT+Q L +L+ LG S L R P T +GQ + L +
Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPG-GTHLGQNLRKLLLETFYEQP 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID---IEWCK 166
LD+ LL++A+R + S+++ L G ++ DRY+ S VA+ +G++ I+
Sbjct: 62 LDEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTVAYQGYGRGLNMIIIDQLN 121
Query: 167 APEIGLLAPDSVLYLDIPPEK--AAERGGYGGERYEH--LEFQRKVAQCY-QMLRDSSWK 221
G L D ++LDI E + +RG +R E +EF +V + Y ++ ++ K
Sbjct: 122 QIATGGLESDLTIWLDIDVEIGLSRKRGQAELDRMEQETIEFHHRVQEGYNKIAKNHPSK 181
Query: 222 II--DACQSIEDVEKQLKEIVLDQV 244
II D + E V++ +++I++D +
Sbjct: 182 IIRVDGNREPELVQENIRKILIDNL 206
>gi|226226593|ref|YP_002760699.1| thymidylate kinase [Gemmatimonas aurantiaca T-27]
gi|226089784|dbj|BAH38229.1| thymidylate kinase [Gemmatimonas aurantiaca T-27]
Length = 237
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G VVLEG + GKT+Q +RL S L +GH V R P T + + + L S L
Sbjct: 14 GLFVVLEGGEGVGKTTQWNRLASALRAVGHEVVAVREPGGTQAGDAIRTLLLDPTSSLSP 73
Query: 115 HTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPE--- 169
T LLF+A+R + + ++E L G ++VDR+ S A+ A +G+ ++ +
Sbjct: 74 GTEALLFAASRAQLVADVVEPALARGAVVLVDRFLLSTYAYQGAGRGLPLDMLSSVNRLA 133
Query: 170 IGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK 221
G APD L L++P + + RG E F +V + S+W+
Sbjct: 134 TGGRAPDLTLLLNVPLDLAMARVQARGAADRMELEDAAFHVRVQAAFVAALSSTWQ 189
>gi|295676547|ref|YP_003605071.1| thymidylate kinase [Burkholderia sp. CCGE1002]
gi|295436390|gb|ADG15560.1| thymidylate kinase [Burkholderia sp. CCGE1002]
Length = 206
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQC----SRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ RL + L G SV + R P T Q+ L
Sbjct: 2 ARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRSVVMTREPGGTPLGEQIREIVLHQ 61
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKA 167
Q L+ + L+F+ R ++E L G ++ DR++ + A+ +G+ + +
Sbjct: 62 QMDLETEAL-LMFALRRQHLADVIEPALTRGDWVLSDRFTDATFAYQGGGRGLPRDKLET 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+PP A ER +R+E F+R A+ + ++
Sbjct: 121 LERWVQGGFQPDLTVLFDLPPAVANERRSAARNPDRFESESAAFFERTRAEYMRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIV 240
++ IID+ QS+ ++KQL+E++
Sbjct: 181 YRFAIIDSSQSVARIQKQLEELI 203
>gi|262276042|ref|ZP_06053851.1| thymidylate kinase [Grimontia hollisae CIP 101886]
gi|262219850|gb|EEY71166.1| thymidylate kinase [Grimontia hollisae CIP 101886]
Length = 211
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYL--EGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
G +V+EGL+ GKT+ ++ L +G+ H +E R P T QM + L + H
Sbjct: 4 GKFIVVEGLEGAGKTTAIRNVIDILKAQGIAH-IETTREPGGTPLAEQMRT--LVKEGHP 60
Query: 113 DD-----HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGID---IE 163
D+ + LL++A ++++ L G ++ DR+ S A+ +G D ++
Sbjct: 61 DEPLTDMAELLLLYAARIQLVDNVIKPALAKGAYVVGDRHDMSSQAYQGGGRGFDKALMQ 120
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLE---FQRKVAQCYQMLR-D 217
+ +G PD LYLD+ P ER GE R E +E F R A+ ++ D
Sbjct: 121 NLRDTVLGDFRPDFTLYLDLDPAIGLERARARGELDRIEQMELDFFHRTRARYLELANED 180
Query: 218 SSWKIIDACQSIEDVEKQLKE 238
+ IIDA QSIE+V +++
Sbjct: 181 ENVVIIDASQSIENVSADIRK 201
>gi|29831165|ref|NP_825799.1| thymidylate kinase [Streptomyces avermitilis MA-4680]
gi|29608279|dbj|BAC72334.1| putative thymidylate kinase [Streptomyces avermitilis MA-4680]
Length = 1073
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 34 SCTPFRMESSSSLRIGN-----IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL 88
S P R + +LR G+ + G + LEG D GK++Q L ++ GH V +
Sbjct: 483 SGVPLRHDLRDALRGGDDPVQTSAASGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVV 542
Query: 89 WRFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVD 145
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I D
Sbjct: 543 TREPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVISD 601
Query: 146 RYSYSGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYE 200
RY S VA+ A G D+ + I L P + LD+ PE A ER +R E
Sbjct: 602 RYIDSSVAYQGA-GRDLSPTEVARISRWATNGLVPHLTVLLDVAPETARERFTEAPDRLE 660
Query: 201 H--LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
EF +V + L + + I+DA Q E V
Sbjct: 661 SEPAEFHARVRSGFLTLAAADLGRYLIVDAGQEPEAV 697
>gi|81298904|ref|YP_399112.1| thymidylate kinase [Synechococcus elongatus PCC 7942]
gi|81167785|gb|ABB56125.1| thymidylate kinase [Synechococcus elongatus PCC 7942]
Length = 215
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLE-----GLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
G +VLEG+D CGK++Q RL+++L G + R P T++GQ + + L Q
Sbjct: 4 GNFIVLEGIDGCGKSTQLQRLVNWLPHSSLLQPGQVIVATREPG-DTALGQALRSLLLTQ 62
Query: 110 SHLDDHTIH----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID-- 161
D LL++A+R + +++ +L AG ++ DRY S VA+ +G+D
Sbjct: 63 DWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAVVVCDRYVDSTVAYQGYGRGLDQS 122
Query: 162 -IEWCKAPEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQMLR 216
I A L D L+LD+P AAER G+R E L FQ ++ Q +Q +
Sbjct: 123 AIAQLNALATAGLRSDLTLWLDLPVAIAAERCQARGQGDRMEAAGLAFQERLRQGFQAIA 182
Query: 217 DSSWK---IIDACQSIEDVEKQLKEIV 240
+ IDA + V +++ +V
Sbjct: 183 AAEPDRVVRIDAAGDPDQVAARIQAVV 209
>gi|227486758|ref|ZP_03917074.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
gi|227235228|gb|EEI85243.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-LD 113
G +V EG D GKT+ ++ LE +S+ +R P T+ ++ S + N ++ +D
Sbjct: 3 GKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREPGGTSISEKIRSIIIDNDNYMMD 62
Query: 114 DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS---AKGID-IEWCKAP 168
T LLF+++R + + LK G +I DR+ S + + A G+D I+
Sbjct: 63 AKTEALLFASSRAQLVAEKITPDLKEGKIVICDRFVMSSLLYQGLGRALGVDNIKTINDF 122
Query: 169 EIGLLAPDSVLYLDIPPEKAAE--RGGYGGERYEH--LEFQRKVAQCYQMLRD---SSWK 221
G L PD L+ +I + A E R + +R E+ F + + Y + D K
Sbjct: 123 ATGGLKPDLTLFFNIDYKTALERKRANFSPDRLENEDFSFHKTIFDGYMKMADLYKDEIK 182
Query: 222 IIDACQSIEDVEKQLKEIV 240
+DA +SIED+ + + I+
Sbjct: 183 KVDARKSIEDLTEDVINII 201
>gi|389842946|ref|YP_006345026.1| thymidylate kinase [Mesotoga prima MesG1.Ag.4.2]
gi|387857692|gb|AFK05783.1| thymidylate kinase [Mesotoga prima MesG1.Ag.4.2]
Length = 209
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ +EG+D CGKT+Q L YL L + R P T + ++ L + HL +
Sbjct: 2 FISVEGIDGCGKTTQIKLLAEYLSQLDVEFIIVREPGGTKAGEEIRDILLHKEYHLFSES 61
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRY-----SYSGVAFSSAKGIDIEWCKAPEI 170
LLF A R + R ++ +L+ G T+I DR+ +Y GV + I ++ A +
Sbjct: 62 ELLLFMAARAQIVREVIRPELEKGKTVIADRFMDSSVAYQGVGRRLGREI-VQAMNAFAV 120
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML---RDSSWKII 223
G PD Y+D+P + A R + E+ +F +V + Y+ L + I
Sbjct: 121 GGTVPDITFYIDVPTDVAISRMRKEKKNDKIEMENFDFFERVREGYEKLMVENRERFVRI 180
Query: 224 DACQSIEDVEKQLKE 238
D QS E V+ +++
Sbjct: 181 DGKQSEEKVQTDIRK 195
>gi|298252464|ref|ZP_06976259.1| thymidylate kinase [Gardnerella vaginalis 5-1]
gi|297533354|gb|EFH72237.1| thymidylate kinase [Gardnerella vaginalis 5-1]
Length = 234
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 29/210 (13%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++G + EG+D GKT+Q L YL+ LG V + R P T +G+ + L + + +
Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPG-GTQLGKTLREILLHGTSV 86
Query: 113 DDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI--------- 162
T LLF+A+R + + ++ L G +I DRY S +A+ A G ++
Sbjct: 87 SARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAY-QAGGRELTKDDVRTLS 145
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS- 219
EW L P+ LD+ PE A +R +R E ++F R+ + + L S
Sbjct: 146 EWATDS----LWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRTREAFLDLAQESA 201
Query: 220 --WKIIDACQS--------IEDVEKQLKEI 239
++++DA S ++DV +KEI
Sbjct: 202 DRYRVLDATFSAKSLFELIVQDVHNLIKEI 231
>gi|385262466|ref|ZP_10040570.1| dTMP kinase [Streptococcus sp. SK643]
gi|385190367|gb|EIF37814.1| dTMP kinase [Streptococcus sp. SK643]
Length = 212
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + N +H
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILNPNHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGID---IE 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+D I+
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD +Y DI E+ R +R E L+ +KV Q Y +L
Sbjct: 119 WLNHFATDGLKPDLTIYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQV 244
+I I+A ++ V + K ++ +++
Sbjct: 179 KEGDRIVKINASLPLDQVLENTKSVLFERI 208
>gi|385809965|ref|YP_005846361.1| thymidylate kinase [Ignavibacterium album JCM 16511]
gi|383802013|gb|AFH49093.1| Thymidylate kinase [Ignavibacterium album JCM 16511]
Length = 205
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--LDD 114
+ EG+D CGK++Q L +Y E G +V++ R P T + + I L ++ + +
Sbjct: 2 FITFEGIDFCGKSTQVELLKNYFEKKGKTVKVIREPG-GTEISEKIRDILLDKKNNKMFM 60
Query: 115 HTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW---CKAPE 169
T LLFSA+R + R + LK G+ +I DR+ S A+ +G+ +E
Sbjct: 61 ETELLLFSASRAQLVREKIIPFLKEGSVVISDRFHDSSTAYQGFGRGLPVEAVLNVHKLA 120
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGG-ERYEHLE-----FQRKVAQCYQML--RDSSWK 221
IG PD +DIP A ER + + +E F KV Y L + ++
Sbjct: 121 IGETIPDITFIIDIPVSVAVERKALKTHQELDRIEVSSNDFFEKVRNGYLSLAKNEKRFR 180
Query: 222 IIDACQSIEDVEK 234
II+ +SIE++ K
Sbjct: 181 IINGTKSIEEIHK 193
>gi|383319327|ref|YP_005380168.1| thymidylate kinase [Methanocella conradii HZ254]
gi|379320697|gb|AFC99649.1| thymidylate kinase [Methanocella conradii HZ254]
Length = 201
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+G L+ +EG+D GKT+Q L +L+ G + P + G+ I A L++ L
Sbjct: 3 QKGILISVEGIDGTGKTTQVRLLKEWLDKRGKDAVALKEPTQG-RYGREI-ARLASSGGL 60
Query: 113 DDHTIHL-LFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGID-IEWCKAP 168
D L LF +R E K +++ A L+AG +I+DRY S +A+ A+G+D ++ +
Sbjct: 61 KDPRKELELFMLDRMEDVKENILPA-LEAGKVVIMDRYYLSNIAYQGARGLDPMKIKEEN 119
Query: 169 EIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQMLRDS-SWKII 223
E PD ++ LDI P + R G G +E+ + R+V + + + +S + +I
Sbjct: 120 EKFSPVPDLIIILDIDPRLSMARVNARKGVVGH-FENEAYLRRVREIFLRIGESPNAVVI 178
Query: 224 DACQSIEDVEKQLKEIV 240
DA +E+V +++ E +
Sbjct: 179 DASGPVEEVHRKIVEAI 195
>gi|283783708|ref|YP_003374462.1| dTMP kinase [Gardnerella vaginalis 409-05]
gi|283441867|gb|ADB14333.1| dTMP kinase [Gardnerella vaginalis 409-05]
Length = 234
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 29/210 (13%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++G + EG+D GKT+Q L YL+ LG V + R P T +G+ + L + + +
Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPG-GTQLGKTLREILLHGTSV 86
Query: 113 DDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI--------- 162
T LLF+A+R + + ++ L G +I DRY S +A+ A G ++
Sbjct: 87 SARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAY-QAGGRELTMDDVRTLS 145
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS- 219
EW L P+ LD+ PE A +R +R E ++F R+ + + L S
Sbjct: 146 EWATDS----LWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRTREAFLDLAQESA 201
Query: 220 --WKIIDACQS--------IEDVEKQLKEI 239
++++DA S ++DV +KEI
Sbjct: 202 DRYRVLDATFSAKSLFELIVQDVHNLIKEI 231
>gi|406659487|ref|ZP_11067625.1| thymidylate kinase [Streptococcus iniae 9117]
gi|405577596|gb|EKB51744.1| thymidylate kinase [Streptococcus iniae 9117]
Length = 210
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLS-NQS 110
++G ++ LEG D GKTS L+ L E + R P + S L N +
Sbjct: 2 TKGIIITLEGPDGAGKTSVLEGLIPLLQEEFTQGIISTREPGGVAIAESIRSLILDVNHT 61
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKL---KAGTTLIVDRYSYSGVAFSSA-KGI---DIE 163
+D T LL+ A R ++ ++E L K G +++DR+ S VA+ A +GI DI+
Sbjct: 62 EMDYKTELLLYIAAR--RQHLVEKVLPAVKKGNLVLIDRFIDSSVAYQGAGRGIEKQDIQ 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQML-R 216
W + PD LY D+P E R +R E ++ +KV Q Y L +
Sbjct: 120 WLNDFATDFITPDLTLYFDVPSEVGLARIEQNKDREINRLDLEKIDMHKKVRQGYLALAK 179
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA QS+E V
Sbjct: 180 ENPDRIVTIDASQSLEKV 197
>gi|399156133|ref|ZP_10756200.1| thymidylate kinase [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 28/204 (13%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G L+ EGLD CGK++Q ++ +L G++V R P T +G+ I + L N H L
Sbjct: 4 GKLITFEGLDGCGKSTQLEKVHDWLTSRGYTVLKTREPG-GTKIGRQIRSILLNPEHKEL 62
Query: 113 DDHTIHLLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID-------I 162
+ LL+ ++R + + +++ AK KAG ++ DR+ S VA+ +G++ +
Sbjct: 63 QPESELLLYLSDRIQHLQETIIPAK-KAGKIVLCDRFHDSTVAYQGYGRGLNLSSIESIV 121
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER-------YEHLEFQRKVAQCYQML 215
E C P + PD ++L+I PE A R ++ E L F ++ AQ ++ L
Sbjct: 122 EHCINPYV----PDLTIFLNISPETVAVRLEQRQKQTKKNRLDLESLNFFKRTAQGFKAL 177
Query: 216 RDSS---WKIIDACQSIEDVEKQL 236
+ + +D Q IE V ++
Sbjct: 178 SAAEPERYVCLDGEQKIEVVHHEI 201
>gi|383785364|ref|YP_005469934.1| thymidylate kinase [Leptospirillum ferrooxidans C2-3]
gi|383084277|dbj|BAM07804.1| thymidylate kinase [Leptospirillum ferrooxidans C2-3]
Length = 218
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYL--EGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
G L+V+EG+D GK++Q L +YL +G G + +W + + + +I Q+ L
Sbjct: 9 GRLIVVEGIDGSGKSTQIELLQNYLRLKGYGVLLNVW---NSSPEISPIIRKAKKKQT-L 64
Query: 113 DDHTIHLLFSAN-RWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
+ LL +A+ + + LKAG ++ DRY Y+ VA A+GI +W +
Sbjct: 65 TPYAFSLLHAADFSYRYTHEILPALKAGKVVLSDRYIYTAVARDCARGIPKDWLVSNFRF 124
Query: 172 LLAPDSVLYLDIPPEKAAER-----------GGYGGE-----RYEHLEFQRKVAQCYQML 215
+ PD + + P + +R G E R ++ FQ KV Y++L
Sbjct: 125 AIRPDLTFFFRVDPAVSYDRITQTREIKYYEAGMDMEFSTNPRESYILFQSKVLAEYEVL 184
Query: 216 -RDSSWKIIDACQSIEDVEKQLKEIV 240
+++ + +ID S+++ +K +++ V
Sbjct: 185 AKENGFHLIDGAHSMDETQKSMRKAV 210
>gi|223932402|ref|ZP_03624404.1| dTMP kinase [Streptococcus suis 89/1591]
gi|302023623|ref|ZP_07248834.1| thymidylate kinase [Streptococcus suis 05HAS68]
gi|330832635|ref|YP_004401460.1| dTMP kinase [Streptococcus suis ST3]
gi|386583897|ref|YP_006080300.1| dTMP kinase [Streptococcus suis D9]
gi|223898856|gb|EEF65215.1| dTMP kinase [Streptococcus suis 89/1591]
gi|329306858|gb|AEB81274.1| dTMP kinase [Streptococcus suis ST3]
gi|353736043|gb|AER17052.1| dTMP kinase [Streptococcus suis D9]
Length = 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSHL 112
G + EG D GKT+ +LL L+ LG V R P ++ + I + N + +
Sbjct: 4 GFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPG-GVAIAEEIRNIILNPANTEM 62
Query: 113 DDHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEWCKA 167
DD T LLF +A R + + L G L++DR+ S +A+ +G+ DI W
Sbjct: 63 DDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWLNQ 122
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRDSSW 220
L PD LY DI E+ R +R E + R+V Q Y +L
Sbjct: 123 FATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDMEKADMHRRVRQGYLNILEQEPE 182
Query: 221 KI--IDACQSIEDVEKQLKEIVLDQVTACKK 249
+ IDA Q +E V V D + KK
Sbjct: 183 RFVKIDASQPLEAV-------VADALAVIKK 206
>gi|225026353|ref|ZP_03715545.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353]
gi|224956363|gb|EEG37572.1| dTMP kinase [Eubacterium hallii DSM 3353]
Length = 209
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
+G +V+EG D GKT+Q + L YLE G+ + R P T +G+ I + N H
Sbjct: 2 KGLFIVMEGPDGSGKTTQINLLKEYLEEAGYECLITREPGGTV-IGEEIRQLILNPEHKE 60
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEWCK 166
+ T LL++A+R + ++ L+ G +I DR+ S + + GI +
Sbjct: 61 MSPVTEMLLYAASRAQLVHEVIGPALEEGKIVISDRFVDSSIVYQGIARKLGISTVSAVN 120
Query: 167 APEIGLLAPDSVLYLDIPP----EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
AP IG+ PD + ++D+ + E+ E ++F V++ Y+ + ++
Sbjct: 121 APGIGIYRPDGIFFIDLSEAEGLRRKKEQKNLDRMEQEGIDFHHMVSEGYRKVLSGRPEV 180
Query: 223 --IDACQSIEDVEKQLK 237
ID +SI+ ++K+++
Sbjct: 181 MKIDGGRSIDTIQKKIR 197
>gi|387889704|ref|YP_006320002.1| thymidylate kinase [Escherichia blattae DSM 4481]
gi|414593018|ref|ZP_11442666.1| thymidylate kinase [Escherichia blattae NBRC 105725]
gi|386924537|gb|AFJ47491.1| thymidylate kinase [Escherichia blattae DSM 4481]
gi|403195851|dbj|GAB80318.1| thymidylate kinase [Escherichia blattae NBRC 105725]
Length = 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
R +V+EGL+ GKTS S ++ L GLG + + T++ + + + + +
Sbjct: 2 RSKFIVIEGLEGSGKTSARSLVIETLRGLGVTDIVETREPGGTALAEKLRSLILDLKATG 61
Query: 114 DHTIH-----LLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGID---IE 163
D I L+F A R + ++++ L G ++ DR+ S A+ + ID +
Sbjct: 62 DEVITAKAEVLMFYAARTQLVETVIKPALARGAWVVGDRHDLSTQAYQGGGRQIDPQMLS 121
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RD 217
+ +G APD LYLD+ PE +A RG E L+F + YQ L D
Sbjct: 122 TLRDTVLGDFAPDLTLYLDVTPEVGLTRARARGALDRIEQESLDFFNRTRARYQALAAAD 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQV 244
S + IDA Q +E V +Q++ ++++ V
Sbjct: 182 SRIRTIDATQPLEQVGQQIRTLLINWV 208
>gi|344940570|ref|ZP_08779858.1| Thymidylate kinase [Methylobacter tundripaludum SV96]
gi|344261762|gb|EGW22033.1| Thymidylate kinase [Methylobacter tundripaludum SV96]
Length = 223
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + LEG + GKT+ + + YLE SV + R P T ++ L N+S
Sbjct: 3 RGKFITLEGCEGVGKTTNMAFIKDYLEQHNISVVVTREPGGTKLAEKIRQLLLDNKSETI 62
Query: 114 DHTIHLL--FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS----SAKGIDIEWCKA 167
LL F+A + ++E L G ++ DR++ + A+ + K I+W +
Sbjct: 63 SEQAELLMMFAARAQHIKHVIEPALAQGKWVLCDRFTDATYAYQGGGRNMKISTIKWLEN 122
Query: 168 PEIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQM---LRDSSW 220
G L PD L LD P E + ERG E + F V + Y + L
Sbjct: 123 LVQGTLRPDLTLLLDAPIEIGIARVRERGALDRFELEKISFFENVRRAYLLQAELYPERI 182
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTACKKGKPFS 254
K+I A Q + DV++ + +++ + C P S
Sbjct: 183 KLIKANQPLIDVQRAITDVIRTLLGLCALNCPTS 216
>gi|375090895|ref|ZP_09737202.1| thymidylate kinase [Helcococcus kunzii ATCC 51366]
gi|374565031|gb|EHR36309.1| thymidylate kinase [Helcococcus kunzii ATCC 51366]
Length = 207
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSH 111
RG + EG D GK++ S++ YLE S + R P T +G+ I L N +
Sbjct: 2 RGKFIAFEGSDGSGKSTVLSKVREYLEENNISYIITREPG-GTKIGEQIRDILINNDNTE 60
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE 169
+DD T LLF+A R + ++ +L +I DRY S +A+ A+G+ ++ ++
Sbjct: 61 MDDKTEALLFAAARAQSVEEKLKKELGQKELVISDRYVLSSLAYQGYARGLGVDGVRSIN 120
Query: 170 ---IGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RDSSW 220
L PD +LD+ P ER E E F KV Y+ L + +
Sbjct: 121 DFATSSLKPDYTFFLDVDPITVLERKKSQVEADRLEEEGNNFHEKVYIGYKKLIENEKNL 180
Query: 221 KIIDACQSIEDVEKQ 235
+IDA + IE+V Q
Sbjct: 181 IVIDASKPIEEVVDQ 195
>gi|386866426|ref|YP_006279420.1| thymidylate kinase [Bifidobacterium animalis subsp. animalis ATCC
25527]
gi|385700509|gb|AFI62457.1| thymidylate kinase [Bifidobacterium animalis subsp. animalis ATCC
25527]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G + EG+D GKT+Q + L +L LG V + R P T++G I A L +
Sbjct: 4 GLFISFEGVDGAGKTTQVNLLADHLRTLGREVVVTREPG-GTALGTQIRAMLLTANPDEE 62
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+ T LLF+A+R + S ++ L+ G +I DRY S +A+ S A +I
Sbjct: 63 ISSRTEALLFAADRAQHVSEVIRPALERGAIVITDRYLDSSLAYQSGG----RELTADDI 118
Query: 171 GLLA--------PDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQML---RD 217
G L+ P LDI P + R + +R E +FQ++ + L +
Sbjct: 119 GTLSMWATNNLLPARTYLLDIDPRASHTRLEHAEDRMESAGDDFQQRTRTAFLELAAAQP 178
Query: 218 SSWKIIDACQSIEDV 232
+++IDA QS+E +
Sbjct: 179 QRFRVIDAQQSVEKI 193
>gi|319949855|ref|ZP_08023867.1| thymidylate kinase [Dietzia cinnamea P4]
gi|319436480|gb|EFV91588.1| thymidylate kinase [Dietzia cinnamea P4]
Length = 222
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-SNQSHLDD-- 114
+V+EGLD GK + +RL++ L+ G SV FP T + + L Q+ D
Sbjct: 1 MVVEGLDGAGKNTLTTRLVAELDARGLSVGRLAFPRYGTLHADLAADALHGGQAGAADSP 60
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GID-----IEWCKAP 168
H + LLF+ +R + A +++DRY S A+++A+ G D I W A
Sbjct: 61 HAMALLFALDRHAALDALAGLAAAHDVVLLDRYVASNAAYTAARLGPDREDEVIAWIGAL 120
Query: 169 E---IGLLAPDSVLYLDIPPEKAAERGGY--------GGERYEH-LEFQRKVAQCYQMLR 216
E +GL AP L LD P E AAER G +RYE + Q + Y+ L
Sbjct: 121 EFDRLGLPAPHLQLLLDTPVEVAAERAGTREAADPGRARDRYERDADLQAATGEVYRRLA 180
Query: 217 DSSWKIIDACQSIEDVEKQLKEIVLD 242
++W + +L ++V+D
Sbjct: 181 AAAWSSPWRVLGTDPAVPELADLVVD 206
>gi|52078523|ref|YP_077314.1| thymidylate kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319648552|ref|ZP_08002766.1| thymidylate kinase [Bacillus sp. BT1B_CT2]
gi|404487393|ref|YP_006711499.1| thymidylate kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423680421|ref|ZP_17655260.1| thymidylate kinase [Bacillus licheniformis WX-02]
gi|81667281|sp|Q65PJ3.1|KTHY_BACLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|52001734|gb|AAU21676.1| thymidylate kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346387|gb|AAU39021.1| thymidylate kinase Tmk [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317389319|gb|EFV70132.1| thymidylate kinase [Bacillus sp. BT1B_CT2]
gi|383441527|gb|EID49236.1| thymidylate kinase [Bacillus licheniformis WX-02]
Length = 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG + GKT+ L GHSV R P + + I + N SH +
Sbjct: 3 GLFITFEGPEGAGKTTILQAAADQLTKNGHSVLATREPG-GIEISERIREVILNPSHTAM 61
Query: 113 DDHTIHLLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE- 169
D T LL++A R + ++ L+ G ++ DR+ S +A+ A+G+ I+ +
Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEEGKIVLCDRFIDSSLAYQGYARGLGIDEVFSVNQ 121
Query: 170 --IGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD---S 218
IG L P+ +Y DI PE+ +R R E L F + V + Y+ + +
Sbjct: 122 FAIGSLMPNVTIYFDIDPEEGIKRIDLNDAREKNRLDLEKLHFHQLVQKGYEEVMNRFPG 181
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
++I+DA QS+E V K++ I+
Sbjct: 182 RFRIVDASQSVELVLKRVNNII 203
>gi|410663294|ref|YP_006915665.1| thymidylate kinase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025651|gb|AFU97935.1| thymidylate kinase [Simiduia agarivorans SA1 = DSM 21679]
Length = 208
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G V +EG + GKT+ + + YLE G +V R P T + L+ + D
Sbjct: 4 GLFVTVEGTEGVGKTTNMAFVQQYLEARGINVLRTREPGGTPLAENIRELLLAQRDETVD 63
Query: 115 HTIHLL--FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPE-- 169
T LL F+A ++ L G ++ DR++ + A+ A +G+D+ E
Sbjct: 64 STAELLLVFAARAQHFNQVICPALAEGNWVLCDRFTDATYAYQGAGRGLDVSLIAQLEQV 123
Query: 170 -IGLLAPDSVLYLDIPPEKAAERGGYGG--ERY--EHLEFQRKVAQCY---QMLRDSSWK 221
G L PD L LDI R G G +R+ E F +V QCY ++
Sbjct: 124 VQGPLRPDCTLLLDIDVSAGLARAGRRGALDRFETEAQAFFERVRQCYLSRAQAEPHRFR 183
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTA 246
++DA QS+E V+ +L VLDQ+ A
Sbjct: 184 VVDAGQSLEQVQAELA-AVLDQLLA 207
>gi|375086383|ref|ZP_09732795.1| thymidylate kinase [Megamonas funiformis YIT 11815]
gi|374565420|gb|EHR36689.1| thymidylate kinase [Megamonas funiformis YIT 11815]
Length = 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SH 111
+G L+++E D CGK +Q L L G+ V+ +PD + + YL + H
Sbjct: 3 KGKLIIIEAGDGCGKATQTKLLYDRLNQAGYKVKKIEYPDYESPACTPVKMYLQGEFGGH 62
Query: 112 LDD---HTIHLLFSANRWEKRSMMEAK-LKAGTTLIVDRYSYSGVAFSSAKGID------ 161
+DD + +LF+ +R+ M K + GT ++ DRY+ S + + K D
Sbjct: 63 VDDVNAYAASVLFAVDRYASYRMKWKKDYEEGTIILADRYTTSNMVHQAVKIEDSKMRDE 122
Query: 162 -IEWCKAPE---IGLLAPDSVLYLDIPPE 186
+ W E +GL PD V++L++PP+
Sbjct: 123 FLSWLWDTEFTKMGLPVPDKVIFLNMPPD 151
>gi|323342269|ref|ZP_08082501.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463381|gb|EFY08575.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 207
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--LDD 114
V EG D GKT+ + Y E V R P + + I + + H +DD
Sbjct: 4 FVSFEGPDGSGKTTITKIVSEYFEKKNQPVLCTREPG-GIRISEKIRELILDPEHEEMDD 62
Query: 115 HTIHLLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--WCKAPEI 170
T LL++A+R + ++ L G +I DR+ S +A+ A+GI I+ W +I
Sbjct: 63 RTEALLYAASRRQHLIEKIKPALGRGELVICDRFVDSSLAYQGYARGIGIDDVW----DI 118
Query: 171 GLLA-----PDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCYQ-MLR--D 217
+ A PD ++LD+ PE+ +R G G + + LE F KV Q YQ ++R
Sbjct: 119 NMFAIDGFLPDLTIFLDLKPEEGLKRIGVRGYK-DRLELEGDVFHEKVYQGYQEVIRRFP 177
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVT 245
+ KI+DA QSIEDV + +I+ Q++
Sbjct: 178 NRIKIVDAAQSIEDVAADVIKIIETQLS 205
>gi|339640583|ref|ZP_08662027.1| dTMP kinase [Streptococcus sp. oral taxon 056 str. F0418]
gi|339453852|gb|EGP66467.1| dTMP kinase [Streptococcus sp. oral taxon 056 str. F0418]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SH 111
+G LV LEG D GK+S L+ LE GH V R P + + I + +Q +
Sbjct: 3 KGLLVSLEGPDGAGKSSVLEALVPILEENGHQVVTTREPG-GVPISEAIREVILDQKNTE 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGI---DIEW 164
+D T LL+ A+R ++ ++E L A G +I+DR+ S VA+ +G+ DIEW
Sbjct: 62 MDGKTELLLYIASR--RQHLIEKVLPALESGKLVIMDRFIDSSVAYQGFGRGLGVSDIEW 119
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRD 217
L PD LY D+ E+ R R E L+ R+V Q Y +
Sbjct: 120 LNRFATDGLKPDVTLYFDLDVEEGLARIARNKNREVNRLDLEGLDMHRRVRQGYLYAFEN 179
Query: 218 SSWKI--IDACQSIEDV 232
+I IDA Q++E V
Sbjct: 180 EPDRIVKIDASQTLESV 196
>gi|404493316|ref|YP_006717422.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380]
gi|123574092|sp|Q3A3X3.1|KTHY_PELCD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|77545372|gb|ABA88934.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380]
Length = 216
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 23/197 (11%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-SNQSHLDDH 115
+ LEG++ GKT+Q RL LE LGH+V + R P Q+ L + HLD
Sbjct: 4 FISLEGIEGSGKTTQIKRLADRLESLGHAVLITREPGGCPIADQIRQILLHPDNGHLDPK 63
Query: 116 TIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGLL 173
LL++A R + + ++ L G ++ DRY + +A+ A+G+D+ K ++ L
Sbjct: 64 AELLLYAAARAQHVAEVIRPALDQGKIVLCDRYCDATLAYQGYARGLDLPMVK--QLNEL 121
Query: 174 A-----PDSVLYLDIPPEKAAERG------GYGGE--RYEH--LEFQRKVAQCYQML--- 215
A P L LD+P ++ R G G E R+E L F KV Q Y L
Sbjct: 122 AAGNCRPHLTLLLDMPHDRGLLRARSRNALGAGPEEGRFEQESLAFHNKVRQGYLDLARQ 181
Query: 216 RDSSWKIIDACQSIEDV 232
K++DA ++++V
Sbjct: 182 EPQRIKVVDANGTLDEV 198
>gi|148241353|ref|YP_001226510.1| thymidylate kinase [Synechococcus sp. RCC307]
gi|166223123|sp|A5GQJ8.1|KTHY_SYNR3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|147849663|emb|CAK27157.1| Thymidylate kinase [Synechococcus sp. RCC307]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL--EGL---GHSVELWRFPDRTTSVGQMISAYLSN 108
RG +VLEG+D CGKT+Q L +L GL G + R P T++GQ + L +
Sbjct: 2 RGRFLVLEGIDGCGKTTQLKALADWLPASGLMPSGAQLITTREPG-GTALGQALRQLLLH 60
Query: 109 QSHLDDHTIH---LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE 163
LL++A+R + ++ +E L AG ++ DRY S A+ +G+D++
Sbjct: 61 PPEEQAPATRAELLLYAADRAQHVQTRLEPALAAGDWVLSDRYCGSTAAYQGYGRGLDLD 120
Query: 164 WCKAPE---IGLLAPDSVLYLDIPPEKAAE-RGGYGGERYEH--LEFQRKVAQCYQMLRD 217
E L PD L+L++ PE AA+ R G +R E L F +V Q + L
Sbjct: 121 LITQLEQLATAGLQPDLCLWLELSPELAAQRRSGQQQDRIEAEGLAFLARVHQGFAELSQ 180
Query: 218 SS-WKIIDACQSIEDVEKQLKEIV 240
W+ +DA E V +Q++ +V
Sbjct: 181 RPLWRRVDASLPPEQVHQQVQHLV 204
>gi|428218369|ref|YP_007102834.1| thymidylate kinase [Pseudanabaena sp. PCC 7367]
gi|427990151|gb|AFY70406.1| thymidylate kinase [Pseudanabaena sp. PCC 7367]
Length = 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ EG++ GKT+Q + +L LGH V + R P T +GQ I + LDD
Sbjct: 5 FITFEGVEGAGKTTQLNLCADWLRSLGHRVRITREPG-GTELGQGIRQLFLGSTGLDDRA 63
Query: 117 IHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID---IEWCKAPEIG 171
+L A+R + + ++ L G ++ DRYS S A+ +G+D I
Sbjct: 64 ELMLLMADRAQHVQEFIKPSLGEGFVVLCDRYSDSTFAYQGYGRGMDWQLISSLNQIATA 123
Query: 172 LLAPDSVLYLDIPPEKAAERG-------GYGGERYEH--LEFQRKVAQCYQMLRD---SS 219
L PD L+LD+ + R G+R E +EF R+V + ++ L
Sbjct: 124 GLEPDLTLWLDLDVDLGLTRARQQSQQQAMSGDRIEQEKIEFHRQVGRGFRNLSKQYPQR 183
Query: 220 WKIIDACQSIEDVEKQLKEIV---LDQVT 245
K I+A I V Q++ +V LDQ++
Sbjct: 184 IKRINATTDIVAVHAQIRRVVTACLDQMS 212
>gi|410087379|ref|ZP_11284083.1| Thymidylate kinase [Morganella morganii SC01]
gi|421494299|ref|ZP_15941649.1| TMK [Morganella morganii subsp. morganii KT]
gi|455739875|ref|YP_007506141.1| Thymidylate kinase [Morganella morganii subsp. morganii KT]
gi|400191466|gb|EJO24612.1| TMK [Morganella morganii subsp. morganii KT]
gi|409766114|gb|EKN50210.1| Thymidylate kinase [Morganella morganii SC01]
gi|455421438|gb|AGG31768.1| Thymidylate kinase [Morganella morganii subsp. morganii KT]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW-RFPDRT---TSVGQMISAYLSNQS 110
G +V+EGL+ GKT+ ++ L G + ++ R P T + +I + ++
Sbjct: 3 GKFIVIEGLEGAGKTTARQVIVDTLRENGITDLVYTREPGGTPLAEKLRTLIKDGIDGET 62
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGID---IEWCK 166
D + +L++A ++++ L G +I DR+ S A+ +GID +E +
Sbjct: 63 VTDKAEVLMLYAARIQLVDNVIKPALARGQWVIGDRHDLSSQAYQGGGRGIDRKLMESLR 122
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQMLRDSSWKI 222
+G PD LYLD+PPE R GE E L+F R+ Y L +S +I
Sbjct: 123 DTVLGDFYPDFTLYLDLPPETGLARARSRGELDRIEQESLDFFRRTRARYLELAESDPRI 182
Query: 223 --IDACQSIEDVEKQLKEIVLD 242
+DA QSI++V + ++ VL+
Sbjct: 183 VTVDASQSIDNVHQSIRTAVLN 204
>gi|333910307|ref|YP_004484040.1| thymidylate kinase [Methanotorris igneus Kol 5]
gi|333750896|gb|AEF95975.1| Thymidylate kinase [Methanotorris igneus Kol 5]
Length = 198
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+Q L L + +G++I L + + T
Sbjct: 6 FIVFEGIDGSGKTTQAKLLTKKLNAF------YTCEPTEGQIGRLIREILKGKKKCEKET 59
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+A+R E ++E KLK + ++ DRY YS +A+ +++G+D ++ PD
Sbjct: 60 LALLFAADRVEHVKLIEEKLKE-SHVVCDRYLYSSIAYQTSQGVDEDFILQINRFAKKPD 118
Query: 177 SVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDAC-QSIEDVEK 234
V+ L + E+ +R G E +E EF +KV Y ++ + + +ID +SI + +
Sbjct: 119 IVVLLTVDVEEGMKRLGKEKEIFEKEEFLKKVQNKYLKLAKKEGFIVIDTTNKSINESHE 178
Query: 235 QLKEIV 240
++ +I+
Sbjct: 179 EILKII 184
>gi|23336149|ref|ZP_00121376.1| COG0125: Thymidylate kinase [Bifidobacterium longum DJO10A]
gi|189440137|ref|YP_001955218.1| thymidylate kinase [Bifidobacterium longum DJO10A]
gi|238692075|sp|B3DUA1.1|KTHY_BIFLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|189428572|gb|ACD98720.1| Thymidylate kinase [Bifidobacterium longum DJO10A]
Length = 206
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-----SNQ 109
G V EG+D GKT+Q RL +YLE G +V + R P T++G+ I L
Sbjct: 3 GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPG-GTALGKAIRQLLLHGVDGGA 61
Query: 110 SHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
+ LLF+A+R + + + L+ G +I DRY S +A+ A G ++ +
Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAY-QAGGRELTPEEIR 120
Query: 169 EIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQML---RDS 218
+ + L PD LD+ P + R + +R E +FQ + Q + L +
Sbjct: 121 SLSMWATNNLLPDRTYLLDMDPALSHNRLEHAEDRMESAGSDFQSRTRQAFLDLAAAEPN 180
Query: 219 SWKIIDACQSIEDV----EKQLKEI 239
+++IDA QSIE V E +KE+
Sbjct: 181 RFRVIDASQSIEAVWAAIESDIKEL 205
>gi|399524112|ref|ZP_10764690.1| dTMP kinase [Atopobium sp. ICM58]
gi|398374786|gb|EJN52330.1| dTMP kinase [Atopobium sp. ICM58]
Length = 289
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
+RG + EG D GK++Q + + E G V + R P T +G I + N
Sbjct: 3 ARGVFITFEGGDGSGKSTQIQSVREWFESRGREVIVTREPG-GTELGTEIRRLVQNGPED 61
Query: 112 LDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEWCK 166
+D T LL++A+R + +++ L+ G ++ DRY S +A+ A G+D I
Sbjct: 62 VDARTEALLYAADRAYHVATVIGPALERGAVVLGDRYIDSSLAYQGAARSLGVDEIASLS 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK--- 221
A L P LD+PPE A R +R E ++F +V Y L D+ +
Sbjct: 122 AWATQGLYPSLTFLLDLPPEVGARRRTDAPDRMERESMDFHERVRHQYLRLADAEPERIV 181
Query: 222 IIDACQSIEDVEKQLKEIVLDQ 243
+IDA ++++V +++ +++++
Sbjct: 182 VIDAVGTVDEVFSEIRGVLVER 203
>gi|399527864|ref|ZP_10767544.1| dTMP kinase [Actinomyces sp. ICM39]
gi|398361582|gb|EJN45331.1| dTMP kinase [Actinomyces sp. ICM39]
Length = 272
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
+RG + EG D GK++Q + + E G V + R P T +G I + N
Sbjct: 3 ARGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPG-GTELGTEIRRLVQNGPED 61
Query: 112 LDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEWCK 166
+D T LL++A+R + +++ L+ G ++ DRY S +A+ A G+D I
Sbjct: 62 VDARTEALLYAADRAYHVATVIAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEIASLS 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK--- 221
A L P LD+PPE A R +R E ++F +V Y L D+
Sbjct: 122 AWATRGLYPSLTFLLDLPPEVGARRRTDAPDRMERESMDFHERVRHEYLRLADAEPDRIV 181
Query: 222 IIDACQSIEDVEKQLKEIVLDQ 243
+IDA ++++V +++ +++++
Sbjct: 182 VIDAVGTVDEVFSEIRGVLVER 203
>gi|374709279|ref|ZP_09713713.1| dTMP kinase [Sporolactobacillus inulinus CASD]
Length = 226
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+G + EG D GKT+Q +L LE G S L R P TT +G I + + N H
Sbjct: 6 DKGLFITFEGPDGSGKTTQIHQLAEELERCGRSFILTREPGGTT-IGDAIRSIILNPEHT 64
Query: 112 -LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L DHT LL++A+R + S + LKAG ++ DR+ + +A+ G+D +
Sbjct: 65 ELADHTEILLYAASRSQHVSEKILPALKAGKIVLCDRFVDASIAY-QGYGLDESVATVKQ 123
Query: 170 I-----GLLAPDSVLYLDIPPEKAAER 191
I G L PD +DI PE +R
Sbjct: 124 INDFATGGLTPDRTYMIDIEPEIGRQR 150
>gi|289577348|ref|YP_003475975.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
gi|289527061|gb|ADD01413.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
Length = 204
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHL 112
+G + EG+D CGKT+Q L YL G+++ + R P T+VG+ + L ++ + +
Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPG-GTNVGEKVRDILLDKYNFI 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK- 166
T LL++++R + ++E K ++ G +++DR+ S + A+G+ IE K
Sbjct: 61 SPVTEMLLYASSRAQ---LVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKI 117
Query: 167 APEIGLLA--PDSVLYLDIPPEKAAE-RGGYGGERYEHL--EFQRKVAQCYQMLRDSSWK 221
EI + PD +Y+DI PE+A + RG +R E +F +KV + Y L K
Sbjct: 118 VNEIATMGILPDVTIYIDITPEEAMKRRGKREADRLERESWDFHKKVREGYIKLVKEYPK 177
Query: 222 ---IIDACQSIEDVEKQLKEIVLDQVTACKK 249
I+ Q I V + D + A KK
Sbjct: 178 RFVFINGMQEIVKVHQ-------DIIDAVKK 201
>gi|187736367|ref|YP_001878479.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835]
gi|254808272|sp|B2UN87.1|KTHY_AKKM8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|187426419|gb|ACD05698.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835]
Length = 206
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+ +G L+V EG+D GK++ L YLE V + F G+M+
Sbjct: 6 ERKGRLIVFEGIDGTGKSTHIGHLRKYLEEKELEV-VQSFEPTRGRWGRMLRDSAVTGRL 64
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP-EI 170
+ + L R + ++ L G +++DRY S +A+ A+GID E +A E
Sbjct: 65 SVEEEVALFLKDRREHVKMLIAPALARGAWVLLDRYYLSMMAYQGARGIDPEVIRAANEE 124
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRD--SSWKI-IDACQ 227
PD+V++LDIP A ER G GER + E + +A C + + W + IDA
Sbjct: 125 FAPVPDAVVWLDIPVSVALERIGNRGER-DAFETEAGLAACRSVFASVHAPWMLRIDADA 183
Query: 228 SIEDVEKQLKE 238
E+V ++++
Sbjct: 184 GKEEVAARVRK 194
>gi|291533518|emb|CBL06631.1| thymidylate kinase [Megamonas hypermegale ART12/1]
Length = 224
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SH 111
+G L+++E D CGK +Q L L G+ V+ +PD + + YL + H
Sbjct: 3 KGKLIIIEAGDGCGKATQTKLLYDRLNQAGYKVKKVEYPDYESPACTPVKMYLQGEFGGH 62
Query: 112 LDD---HTIHLLFSANRWEKRSMMEAK-LKAGTTLIVDRYSYSGVAFSSAKGID------ 161
+DD + +LF+ +R+ M K + GT ++ DRY+ S + + K D
Sbjct: 63 VDDVNAYAASVLFAVDRYASYRMKWKKDYEEGTIILADRYTTSNMVHQAVKIEDSKMRDE 122
Query: 162 -IEWCKAPE---IGLLAPDSVLYLDIPPE 186
+ W E +GL PD V++L++PP+
Sbjct: 123 FLSWLWDTEFTKMGLPVPDKVIFLNMPPD 151
>gi|406951984|gb|EKD81748.1| hypothetical protein ACD_39C01659G0005 [uncultured bacterium]
Length = 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHL 112
+G+ + EG + GKT+Q + L +L G V R P T++ ++ S L N+ L
Sbjct: 3 KGSFITFEGPEGSGKTTQIALLRDFLTNRGFEVITTREPGGTSAGDRIRSVLLGNEIGSL 62
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEI 170
+ T L A R E R +++ + G ++ DRY S +A+ A+G+D + +
Sbjct: 63 EPETELFLMLAQRTEHLRKVIQPAVNQGKMVLCDRYFDSSMAYQGYARGLDPQKIREIHA 122
Query: 171 GLLA---PDSVLYLDIPPEKAAERGGYGGERY------EHLEFQRKVAQCYQML 215
L P+ + L I PE+ ER +GG + E L+F R+V + Y L
Sbjct: 123 QFLPGFLPECTVLLQIAPEQGLERARHGGRKQHDRIESEDLDFHRRVYEGYNSL 176
>gi|395775638|ref|ZP_10456153.1| thymidylate kinase [Streptomyces acidiscabies 84-104]
Length = 1110
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+ G + LEG D GK++Q L ++ GH V L R P T VG+ + + L + S
Sbjct: 507 TTGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPG-ATPVGKRLRSILLDVSSA 565
Query: 112 -LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L LL++A+R E +++ L+ G +I DRY S VA+ A G D+ +
Sbjct: 566 GLSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYVDSSVAYQGA-GRDLSPVEIAR 624
Query: 170 IGLLAPDSV-----LYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS--- 219
I A D + + LD+ PE A ER +R E EF +V + L +
Sbjct: 625 ISRWATDGLVPHLTVLLDVSPETARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGR 684
Query: 220 WKIIDACQSIEDVEKQLKEIVLDQV 244
+ ++DA Q E V ++ LDQ+
Sbjct: 685 YLVVDAGQEPESVTTVVRA-RLDQL 708
>gi|386841552|ref|YP_006246610.1| integral membrane protein with kinase activity [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374101853|gb|AEY90737.1| integral membrane protein with kinase activity [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451794846|gb|AGF64895.1| integral membrane protein with kinase activity [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 1109
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 34 SCTPFRMESSSSLRIGNID------SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVE 87
S P R + +L +G D + G + LEG D GK++Q L ++ GH V
Sbjct: 483 SGVPLRQDLKDAL-LGGDDPVTAPAANGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVV 541
Query: 88 LWRFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIV 144
L R P T VG+ + + L + S L LL++A+R E +++ L+ G +I
Sbjct: 542 LTREPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVIT 600
Query: 145 DRYSYSGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERY 199
DRY S VA+ A G D+ + I L P + LD+ PE A ER +R
Sbjct: 601 DRYIDSSVAYQGA-GRDLSPTEIARINRWATNGLVPHLTVLLDVSPETARERFTEAPDRL 659
Query: 200 EH--LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
E EF +V + L S + ++DA Q E V
Sbjct: 660 ESEPAEFHARVRAGFLTLAASDPGRYLVVDAGQEPEAV 697
>gi|332981941|ref|YP_004463382.1| thymidylate kinase [Mahella australiensis 50-1 BON]
gi|332699619|gb|AEE96560.1| thymidylate kinase [Mahella australiensis 50-1 BON]
Length = 231
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L+V+EG D G+++Q + L +LE GH+V L R+T VG I + L
Sbjct: 23 GYLIVIEGADGSGRSTQINLLKDWLEAKGHAV-LDTGLKRSTLVGSTIDE-AKKGNLLGK 80
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
T+ LL++ + ++ + + L+AG ++ DRY ++ +A +G W K L
Sbjct: 81 TTLSLLYATDFGDRLENNIIPALEAGFIVLADRYIFTLMARDMVRGARRAWLKEMFGFAL 140
Query: 174 APDSVLYLDIPPEKAAERGGYGGERYEHLEF------------QRKVAQCYQ-MLRDS-- 218
PD V YL + P+ R +Y HL++ + K + YQ ML+D
Sbjct: 141 IPDIVFYLQVSPDVLLHRAFM---QYGHLDYWESGMDLGISPDRFKSFKQYQSMLKDQFD 197
Query: 219 ------SWKIIDACQSIEDVEKQLKEIVLDQV 244
+ +D C +E ++++L+E +L+++
Sbjct: 198 NLAQEYGFITLDGCMDVEAIQQRLREEILERI 229
>gi|94676700|ref|YP_588872.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|166221720|sp|Q1LT42.1|KTHY_BAUCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|94219850|gb|ABF14009.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLG-HSVELWRFPDRTTSVGQMISAYLS---NQ 109
+ +V+EGL+ GKTS ++++ L G H++ R P T + + I + N
Sbjct: 2 KSKFIVIEGLEGAGKTSVIQQIITILHSNGIHNIISTRDPG-GTPLAETIRDIIKKGMNG 60
Query: 110 SHLDDHT-IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDI---EW 164
++ D+T + LL++A +++ L +GT +I DRY S A+ +GIDI +
Sbjct: 61 EYITDYTELLLLYAARTQLVAQVIKPALMSGTWVISDRYDLSSQAYQGGGRGIDIRLLQN 120
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLE------FQRKVAQCYQML-RD 217
+ +G PD +YLD+PP K R G + +E FQR + +++ D
Sbjct: 121 LRDAALGKFYPDLTIYLDLPPSKCRARIRARGIPLDRIEMESLSFFQRTSIRYRELVAND 180
Query: 218 SSWKIIDACQSIEDVEKQLKE 238
S IDA QSI ++ ++
Sbjct: 181 SRIITIDAQQSIAELNATIRN 201
>gi|345298799|ref|YP_004828157.1| thymidylate kinase [Enterobacter asburiae LF7a]
gi|345092736|gb|AEN64372.1| Thymidylate kinase [Enterobacter asburiae LF7a]
Length = 213
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLG-HSVELWRFPDRTTSVGQMISAYLSNQSHL 112
R +V+EGL+ GKT+ + ++ L+ LG + R P T ++ S L +S
Sbjct: 2 RSKYIVIEGLEGAGKTTARNLVVDTLKTLGIGEMVFTREPGGTQLAEKLRSLVLDIKSVG 61
Query: 113 D----DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
D D L+F A R + ++++ L G +I DR+ S A+ +GID +
Sbjct: 62 DEIITDKAEVLMFYAARVQLVETVIKPALAEGKWVIGDRHDLSTQAYQGGGRGIDQTMLA 121
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RD 217
+ +G PD LYLD+ PE +R GE E L+F + Y L +D
Sbjct: 122 TLRDAVLGNFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRTRARYLELAGQD 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
SS + IDA QS++DV + ++E V
Sbjct: 182 SSIRTIDATQSLDDVARSIRETV 204
>gi|392978566|ref|YP_006477154.1| thymidylate kinase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392324499|gb|AFM59452.1| thymidylate kinase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 213
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW-RFPDRTTSVGQMISAYLSNQSHL 112
R +V+EGL+ GKT+ + ++ L+ LG + ++ R P T ++ S L +S
Sbjct: 2 RSKYIVIEGLEGAGKTTARNVVIDTLKALGVADMVFTREPGGTQLAEKLRSLVLDIKSVG 61
Query: 113 D----DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
D D L+F A R + ++++ L AG +I DR+ S A+ +GID +
Sbjct: 62 DEVITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDQTMLA 121
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RD 217
+ +G PD LYLD+ PE +R GE E L+F + Y L +D
Sbjct: 122 TLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRTRARYLELASQD 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
S + IDA QS+E+V + ++E V
Sbjct: 182 HSIRTIDATQSLEEVTRSIEETV 204
>gi|296271416|ref|YP_003654048.1| thymidylate kinase [Thermobispora bispora DSM 43833]
gi|296094203|gb|ADG90155.1| thymidylate kinase [Thermobispora bispora DSM 43833]
Length = 686
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-- 111
RG + EG + GKT+Q L +L G+ V R P T +G + A L + +H
Sbjct: 465 RGLFIAFEGGEGSGKTTQARMLAIWLRDQGYDVVQTREPG-GTKLGMRLRAILLDSAHQG 523
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID-------I 162
+ + LL++A+R E ++ L+ G+ +I DRY S +A+ A + +D
Sbjct: 524 ISGRSEALLYAADRAEHVEKVIRPALRRGSAVISDRYVDSSLAYQGAGRMLDRDEVARIN 583
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS- 219
EW G L PD + LD+PP R G +R E LEF +V + + L +
Sbjct: 584 EWAT----GGLVPDLTVVLDVPPAVGLRRMGSPADRLEAEPLEFHERVRRELRALAAAEP 639
Query: 220 --WKIIDACQSIEDVEK----QLKEIVLDQV 244
+ ++D E+V + +++EI+ D V
Sbjct: 640 ERYLVVDGTLPQEEVTRIIQDRVREILPDPV 670
>gi|227545645|ref|ZP_03975694.1| dTMP kinase [Bifidobacterium longum subsp. longum ATCC 55813]
gi|239622679|ref|ZP_04665710.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|312133481|ref|YP_004000820.1| tmk [Bifidobacterium longum subsp. longum BBMN68]
gi|322688333|ref|YP_004208067.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F]
gi|46576601|sp|Q8G6Z6.2|KTHY_BIFLO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|227213761|gb|EEI81600.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|239514676|gb|EEQ54543.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|311772719|gb|ADQ02207.1| Tmk [Bifidobacterium longum subsp. longum BBMN68]
gi|320459669|dbj|BAJ70289.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F]
Length = 206
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-----SNQ 109
G V EG+D GKT+Q RL +YLE G +V + R P T++G+ I L
Sbjct: 3 GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPG-GTALGKAIRQLLLHGVDGGA 61
Query: 110 SHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
+ LLF+A+R + + + L+ G +I DRY S +A+ A G ++ +
Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAY-QAGGRELTPEEIR 120
Query: 169 EIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQML---RDS 218
+ + L PD LD+ P + R + +R E +FQ + Q + L +
Sbjct: 121 SLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRTRQAFLDLAAAEPN 180
Query: 219 SWKIIDACQSIEDV----EKQLKEI 239
+++IDA QSIE V E +KE+
Sbjct: 181 RFRVIDASQSIEAVWAAIESDIKEL 205
>gi|452209698|ref|YP_007489812.1| Thymidylate kinase [Methanosarcina mazei Tuc01]
gi|452099600|gb|AGF96540.1| Thymidylate kinase [Methanosarcina mazei Tuc01]
Length = 167
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ ++ E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAI--QSETD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L G +I DRYS Y GV S +EW ++
Sbjct: 60 QLAELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSRFENPLEWVRS 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEF 204
G + PD DI PE A ER G GE ++E +EF
Sbjct: 120 LHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQTKFEKIEF 159
>gi|253751477|ref|YP_003024618.1| thymidylate kinase [Streptococcus suis SC84]
gi|253753378|ref|YP_003026519.1| thymidylate kinase [Streptococcus suis P1/7]
gi|253755793|ref|YP_003028933.1| thymidylate kinase [Streptococcus suis BM407]
gi|386579703|ref|YP_006076108.1| thymidylate kinase [Streptococcus suis JS14]
gi|386581651|ref|YP_006078055.1| thymidylate kinase [Streptococcus suis SS12]
gi|403061288|ref|YP_006649504.1| thymidylate kinase [Streptococcus suis S735]
gi|251815766|emb|CAZ51368.1| thymidylate kinase [Streptococcus suis SC84]
gi|251818257|emb|CAZ56065.1| thymidylate kinase [Streptococcus suis BM407]
gi|251819624|emb|CAR45362.1| thymidylate kinase [Streptococcus suis P1/7]
gi|319757895|gb|ADV69837.1| thymidylate kinase [Streptococcus suis JS14]
gi|353733797|gb|AER14807.1| thymidylate kinase [Streptococcus suis SS12]
gi|402808614|gb|AFR00106.1| thymidylate kinase [Streptococcus suis S735]
Length = 212
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG D GKT+ +LL L+ LG V R P ++ + I + N ++ +
Sbjct: 4 GFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPG-GVAIAEEIRNIILNPANTAM 62
Query: 113 DDHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEWCKA 167
DD T LLF +A R + + L G L++DR+ S +A+ +G+ DI W
Sbjct: 63 DDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWLNQ 122
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRDSS-- 219
L PD LY DI E+ R +R E + R+V Q Y + +
Sbjct: 123 FATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDMEKADMHRRVRQGYLSILEQEPE 182
Query: 220 -WKIIDACQSIEDV 232
+ IDA Q +E V
Sbjct: 183 RFVKIDASQPLEAV 196
>gi|146318315|ref|YP_001198027.1| thymidylate kinase [Streptococcus suis 05ZYH33]
gi|386577646|ref|YP_006074052.1| thymidylate kinase [Streptococcus suis GZ1]
gi|145689121|gb|ABP89627.1| Thymidylate kinase [Streptococcus suis 05ZYH33]
gi|292558109|gb|ADE31110.1| Thymidylate kinase [Streptococcus suis GZ1]
Length = 222
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG D GKT+ +LL L+ LG V R P ++ + I + N ++ +
Sbjct: 14 GFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPG-GVAIAEEIRNIILNPANTAM 72
Query: 113 DDHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEWCKA 167
DD T LLF +A R + + L G L++DR+ S +A+ +G+ DI W
Sbjct: 73 DDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWLNQ 132
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRDSS-- 219
L PD LY DI E+ R +R E + R+V Q Y + +
Sbjct: 133 FATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDMEKADMHRRVRQGYLSILEQEPE 192
Query: 220 -WKIIDACQSIEDV 232
+ IDA Q +E V
Sbjct: 193 RFVKIDASQPLEAV 206
>gi|453049683|gb|EME97260.1| thymidylate kinase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 1232
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 37 PFRMESSSSLRIGN----IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFP 92
PF + ++R G+ + G +V +G D GK++Q + ++ GH V + R P
Sbjct: 476 PFHRDLLDAVRDGDPVEATAADGFFLVFDGGDGAGKSTQVQAIAEWIRSKGHEVVVTREP 535
Query: 93 DRTTSVGQMISAYLSN--QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSY 149
T++G+ + A L + + L D LL++A+R E +++ L+ G +I DRY
Sbjct: 536 G-ATAIGKRLRAILLDVASAGLSDRAEALLYAADRAEHINAVVRPALERGAVVISDRYID 594
Query: 150 SGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--L 202
S VA+ A G D+ + I L P + LD+ PE A ER +R E
Sbjct: 595 SSVAYQGA-GRDLSPTEIARINRWATEGLVPHLTVLLDVSPETARERFTEAPDRLESEPA 653
Query: 203 EFQRKVAQCYQMLRDSS---WKIIDACQSIEDVEKQLKEIVLDQV 244
EF +V + + L + + ++DA Q E V ++ LD+V
Sbjct: 654 EFHERVRKGFLALAAADPARYLVVDAGQEPEAVTTVVRH-RLDEV 697
>gi|445063009|ref|ZP_21375289.1| thymidylate kinase [Brachyspira hampsonii 30599]
gi|444505607|gb|ELV06089.1| thymidylate kinase [Brachyspira hampsonii 30599]
Length = 185
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQ-----MISAYLSN 108
G L+VLEG+D GK+S L L LG ++ F G M+S L
Sbjct: 2 EGKLIVLEGIDGSGKSSIGMMLTDTLNNLGIK-SIYTFEPTHAYYGSKLRESMLSKDLKP 60
Query: 109 QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC-K 166
+ L LF A+R E + M++ + G +++DRY YS +A+ AKGID E+
Sbjct: 61 EEELS------LFIADRKEHIKHMIKPAVNDGYVIVLDRYMYSSIAYQGAKGIDKEYIYN 114
Query: 167 APEIGLLAPDSV--LYLDIPP--EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
+ +L PD V L+LDI + E+ G+ +R+E+ + +V + +
Sbjct: 115 LHKDFILQPDLVFILHLDIETALNRIMEKRGF-VDRFENKNYLEEVDKIFFSFNAPYIHH 173
Query: 223 IDACQSIEDVEK 234
IDA +S E ++K
Sbjct: 174 IDASKSQESIKK 185
>gi|336066928|ref|YP_004561786.1| dTMP kinase [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|334296874|dbj|BAK32745.1| dTMP kinase [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 207
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--LDD 114
V EG D GKT+ + Y E V R P + + I + + H +DD
Sbjct: 4 FVSFEGPDGSGKTTITKIVSEYFEKKNQPVLCTREPG-GIRISEKIRELILDPEHEEMDD 62
Query: 115 HTIHLLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--WCKAPEI 170
T LL++A+R + ++ L G +I DR+ S +A+ A+GI I+ W +I
Sbjct: 63 RTEALLYAASRRQHLIEKIKPALGRGELVICDRFVDSSLAYQGYARGIGIDDVW----DI 118
Query: 171 GLLA-----PDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCYQ-MLR--D 217
+ A PD ++LD+ PE +R G G + + LE F KV Q YQ ++R
Sbjct: 119 NMFAIDGFLPDLTIFLDLKPEDGLKRIGVRGYK-DRLELEGDVFHEKVYQGYQEVIRRFP 177
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVT 245
+ KI+DA QSIEDV + +I+ Q++
Sbjct: 178 NRIKIVDAAQSIEDVAADVIKIIETQLS 205
>gi|291517602|emb|CBK71218.1| thymidylate kinase [Bifidobacterium longum subsp. longum F8]
Length = 206
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-----SNQ 109
G V EG+D GKT+Q RL +YLE G +V + R P T++G+ I L
Sbjct: 3 GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPG-GTALGKAIRQLLLHGVDGGA 61
Query: 110 SHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
+ LLF+A+R + + + L+ G +I DRY S +A+ A G ++ +
Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAY-QAGGRELTPEEIR 120
Query: 169 EIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQML---RDS 218
+ + L PD LD+ P + R + +R E +FQ + Q + L +
Sbjct: 121 SLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRTRQAFLDLAAAEPN 180
Query: 219 SWKIIDACQSIEDV----EKQLKEI 239
+++IDA QSIE V E +KE+
Sbjct: 181 RFRVIDASQSIEAVWAAIESDIKEL 205
>gi|325108330|ref|YP_004269398.1| thymidylate kinase [Planctomyces brasiliensis DSM 5305]
gi|324968598|gb|ADY59376.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305]
Length = 228
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT-TSVGQMISAYLSNQ----SH 111
+ +EG+D GK +Q + L +L G + FP T +G+ I +L Q H
Sbjct: 4 FIAIEGIDGSGKGTQTAALCDHLNAQGLRCDTITFPRYAETLLGKQIGRFLDGQFGALDH 63
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK--GID----IEWC 165
L I L+++ R+E RS++E KL LI DRY S +A A+ G + +++
Sbjct: 64 LHPVPISLMYATERYESRSLIEEKLNNCDVLIADRYVGSNLAHQGARLEGDERAEFLKFI 123
Query: 166 KAPEIGLLA---PDSVLYLDIPPEKAAERGGYGGER----------YEHLEFQRKVAQCY 212
+ E L A P+ VL LD+P + +A R R + E+ V + Y
Sbjct: 124 EKLEYELFAVPRPELVLLLDLPADASAARVAKKKARDYTQQVTDLHESNHEYLADVREVY 183
Query: 213 QMLRDS--SWKIID------ACQSIEDVEKQLKEIV 240
L ++ +W + A +SI++++++L++IV
Sbjct: 184 LELSETFENWSRVSCLSPNGADRSIDEIQQELRDIV 219
>gi|332980962|ref|YP_004462403.1| thymidylate kinase [Mahella australiensis 50-1 BON]
gi|332698640|gb|AEE95581.1| thymidylate kinase [Mahella australiensis 50-1 BON]
Length = 212
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
SRG + +EG+D GK++ S L YL G L R P T Q+ S L N S
Sbjct: 2 SRGLFITIEGIDGSGKSTHASMLADYLNERGIPSVLTREPGGTRIGEQVRSILLDNVNSD 61
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE 169
+ T LL++A+R + + +++ L+ G ++ DR+ S +A+ A+G+ ++ K
Sbjct: 62 MAAMTEVLLYAASRAQHVAQVIKPALEQGKVVLCDRFVDSSLAYQGYARGLGLDTVKTIN 121
Query: 170 ---IGLLAPDSVLYLDIPPEKAAERGGYGGER----YEHLEFQRKVAQCYQ---MLRDSS 219
+G + PD L LDI PE A +R G + E LE + V + Y+ L
Sbjct: 122 EHALGGVWPDITLLLDISPEIAWKRILKDGFKDRLESEGLELLKVVYEGYRNIARLYSDR 181
Query: 220 WKIIDACQSIEDVEKQLKEIV 240
+ II A + D+ K++ I+
Sbjct: 182 FYIISAADGVNDIHKKILSII 202
>gi|167753463|ref|ZP_02425590.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216]
gi|167658088|gb|EDS02218.1| dTMP kinase [Alistipes putredinis DSM 17216]
Length = 225
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSV-GQMISAYLSNQ----SH 111
L+VLEGLD GK++Q + G FP V G++I+ +L +
Sbjct: 2 LIVLEGLDGAGKSTQVELVRRMFAQEGVESHFLHFPRFDAPVYGELIARFLRGELGAVDK 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK------------- 158
+D + + LLF+ +R + + + L AG +++DRY YS V F AK
Sbjct: 62 VDPYLVALLFAGDRADAAAQLRCWLDAGHAVVLDRYVYSNVGFQCAKLPAGDRQEELRRW 121
Query: 159 GIDIEWCKAPEIGLLAPDSVLYLDIP----------PEKAAERGGYGGERYEH---LEFQ 205
+D+E+ G+ PD L+LD+P + +R GER H L+ Q
Sbjct: 122 ILDLEFGY---YGIPRPDVSLFLDVPFAFTEKKLSEVREGDDREYLKGERDIHEASLDLQ 178
Query: 206 RKVAQCY 212
R+V + Y
Sbjct: 179 RRVREVY 185
>gi|269976291|ref|ZP_06183287.1| thymidylate kinase [Mobiluncus mulieris 28-1]
gi|269935620|gb|EEZ92158.1| thymidylate kinase [Mobiluncus mulieris 28-1]
Length = 246
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN---- 108
+RGA V EG D GK++Q +++ G V R P T++G+ + L
Sbjct: 29 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPG-GTNLGRQLRELLLEAGET 87
Query: 109 ---QSHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
+ + LLF+A+R + + ++ L AG +I DR+ S VA+ +G D+
Sbjct: 88 TVCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAY-QGQGRDLGP 146
Query: 165 CKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERY-------EHLEFQRKVAQCY 212
+ ++ L L P+ + LD+ PE A ER R E LEFQRKV +
Sbjct: 147 KEIRDLSLWATGGLTPNLTVLLDLDPEIAWERQQNDETRVSPDRMEGEGLEFQRKVRARF 206
Query: 213 QML--RDSSWKIIDACQSIEDVEKQLK 237
+ L + +W ++DA + E++ Q++
Sbjct: 207 RRLAEENETWMVVDASLTPEEIAAQVR 233
>gi|307701598|ref|ZP_07638615.1| dTMP kinase [Mobiluncus mulieris FB024-16]
gi|307613277|gb|EFN92529.1| dTMP kinase [Mobiluncus mulieris FB024-16]
Length = 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN---- 108
+RGA V EG D GK++Q +++ G V R P T++G+ + L
Sbjct: 21 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPG-GTNLGRQLRELLLEAGET 79
Query: 109 ---QSHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
+ + LLF+A+R + + ++ L AG +I DR+ S VA+ +G D+
Sbjct: 80 TVCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAY-QGQGRDLGP 138
Query: 165 CKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERY-------EHLEFQRKVAQCY 212
+ ++ L L P+ + LD+ PE A ER R E LEFQRKV +
Sbjct: 139 KEIRDLSLWATGGLTPNLTVLLDLDPEIAWERQQNDETRVSPDRMESEGLEFQRKVRARF 198
Query: 213 QML--RDSSWKIIDACQSIEDVEKQLK 237
+ L + +W ++DA + E++ Q++
Sbjct: 199 RRLAEENETWMVVDASLAPEEIAAQVR 225
>gi|410460296|ref|ZP_11313977.1| thymidylate kinase [Bacillus azotoformans LMG 9581]
gi|410460316|ref|ZP_11313996.1| thymidylate kinase [Bacillus azotoformans LMG 9581]
gi|409927255|gb|EKN64397.1| thymidylate kinase [Bacillus azotoformans LMG 9581]
gi|409927284|gb|EKN64424.1| thymidylate kinase [Bacillus azotoformans LMG 9581]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHLDDH 115
L+ LEG++ GK++ + + +LE G S+ + R P Q+ S L + + +D
Sbjct: 4 LITLEGVEGSGKSTLINYVKDFLEYRGKSIVVTREPGGIDIAEQIRSVILDKKNTKMDGR 63
Query: 116 TIHLLFSANRWEKRSMMEA---KLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPE-- 169
T LL++A R ++ ++E L ++ DR+ S +A+ A+G+ I+ +
Sbjct: 64 TEALLYAAAR--RQHLVEKIIPSLNEDKIVLCDRFIDSSLAYQGYARGLGIDEVLSINEF 121
Query: 170 -IGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRDSSWK 221
IG P+ LYLD+ PE R ER E + F KV + Y ++L +
Sbjct: 122 AIGNFMPNLTLYLDLDPEVGLSRIRKNKEREVNRLDLEEMNFHNKVKEGYEEVLVKFPNR 181
Query: 222 I--IDACQSIEDVEKQLKEIVLDQV 244
I IDA Q IE+V ++K++++D++
Sbjct: 182 IVRIDANQEIENVFSEIKKVLIDKI 206
>gi|320095385|ref|ZP_08027065.1| thymidylate kinase, partial [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977690|gb|EFW09353.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 256
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ 109
++ RG + EG+D GKT+Q + + E G V + P T ++ +
Sbjct: 8 SMSPRGVFITFEGVDGAGKTTQIRNVREWFEERGFEVVMTCEPGGTPLGAELRRLVQNGP 67
Query: 110 SHLDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEW 164
+D T LL++A+R + +++ L G ++ DRY S +A+ A G+D I
Sbjct: 68 DDIDPRTEALLYAADRAYHVATVVRPALARGAVVLGDRYIDSSLAYQGAARSLGVDEIAA 127
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK- 221
A L+P + LD+PPE A R +R E +F +V + Y L D+
Sbjct: 128 MSAWATEGLSPRTTFLLDLPPEVGAGRRTDAPDRMERESADFHERVRREYLRLADAEPDR 187
Query: 222 --IIDACQSIEDVEKQLKEIVLDQ 243
+IDA + E+V +++ +++++
Sbjct: 188 IVVIDAVGTREEVFSEIRGVLVER 211
>gi|227876763|ref|ZP_03994872.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|227842660|gb|EEJ52860.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length = 246
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN---- 108
+RGA V EG D GK++Q +++ G V R P T++G+ + L
Sbjct: 29 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPG-GTNLGRQLRELLLEAGET 87
Query: 109 ---QSHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
+ + LLF+A+R + + ++ L AG +I DR+ S VA+ +G D+
Sbjct: 88 TVCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAY-QGQGRDLGP 146
Query: 165 CKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERY-------EHLEFQRKVAQCY 212
+ ++ L L P+ + LD+ PE A ER R E LEFQRKV +
Sbjct: 147 KEIRDLSLWATGGLTPNLTVLLDLDPEIAWERQQNDETRVSPDRMEGEGLEFQRKVRARF 206
Query: 213 QML--RDSSWKIIDACQSIEDVEKQLK 237
+ L + +W ++DA + E++ Q++
Sbjct: 207 RRLAEENETWMVVDASLAPEEIAAQVR 233
>gi|345020794|ref|ZP_08784407.1| thymidylate kinase [Ornithinibacillus scapharcae TW25]
Length = 211
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + EG + GKTS + LE LG V R P + + I + N H +
Sbjct: 3 GYFITFEGGEGAGKTSILHSIAGKLENLGFDVITTREPG-GIDIAEKIRNIILNPLHTEM 61
Query: 113 DDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWC--- 165
D T LL++A R ++ ++E LK G ++ DR+ S +A+ A+G+ I+
Sbjct: 62 DGRTEALLYAAAR--RQHLVEKVFPSLKEGKIVLCDRFIDSSLAYQGHARGLGIDEVFTI 119
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRDSS 219
I PD L+ DI P K ER +R E L F KV + YQ+L
Sbjct: 120 NQFAIQNAMPDLTLFFDIEPRKGLERIAANKDRERNRLDLEELNFHEKVYEAYQILVKRF 179
Query: 220 WK---IIDACQSIEDVE 233
K +I+A Q+IE VE
Sbjct: 180 PKRINVINADQTIEKVE 196
>gi|308066851|ref|YP_003868456.1| thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681]
gi|305856130|gb|ADM67918.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681]
Length = 215
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
++ +G + LEG D GKT+ RL ++E G+ V R P + + I + + + +
Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGYPVITTREPG-GIEISEKIRSIILDPA 59
Query: 111 H--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCK 166
H +D T LL++A R + ++ ++ G ++ DR+ S + + A+GI IE
Sbjct: 60 HTSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVA 119
Query: 167 APEIGLLA-----PDSVLYLDIPPEKAAER--GGYGGER----YEHLEFQRKVAQCY-QM 214
+ I A PD+ YLDI PE R G E E + F KV + Y ++
Sbjct: 120 S--INRFAVDDWEPDATFYLDIEPELGLARINASRGAEMDRLDMESISFHHKVREAYLEL 177
Query: 215 LRDSSWK--IIDACQSIEDVEKQLKEIV 240
R + I+DA + E VE+ LK+++
Sbjct: 178 ARKFPERITIVDASPAPEQVEQVLKDLL 205
>gi|440699048|ref|ZP_20881358.1| dTMP kinase [Streptomyces turgidiscabies Car8]
gi|440278468|gb|ELP66494.1| dTMP kinase [Streptomyces turgidiscabies Car8]
Length = 1063
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 34 SCTPFRMESSSSLRIGNIDSR-----GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL 88
S P R + +LR G+ ++ G + +EG D GK++Q + L ++ GH V +
Sbjct: 483 SGVPLRHDLRDALRGGDDPAQAPAATGFFIAIEGGDGAGKSTQATALAEWIRAKGHEVVV 542
Query: 89 WRFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVD 145
R P T VG+ + + L + S L LL++A+R E +++ L+ G ++ D
Sbjct: 543 TREPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVVSD 601
Query: 146 RYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSV-----LYLDIPPEKAAERGGYGGERYE 200
RY S VA+ A G D+ + I A D + + LD+ PE A ER +R E
Sbjct: 602 RYIDSSVAYQGA-GRDLSPTEIARISRWATDGLVPHLTVLLDVSPEAARERFTEAPDRLE 660
Query: 201 H--LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
EF +V + L + + ++DA Q E V
Sbjct: 661 SEPAEFHERVRSGFLTLAAADPGRYLVVDAGQEPEAV 697
>gi|284175009|ref|ZP_06388978.1| dTMP kinase [Sulfolobus solfataricus 98/2]
gi|384434298|ref|YP_005643656.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
gi|261602452|gb|ACX92055.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
Length = 189
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 9/187 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEG-LGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
L+ +EG+D GKT+ + L YLE + +V + R P + + ++I N D
Sbjct: 4 LIAIEGIDGSGKTTLANLLKEYLESKMKLNVIVTREP-FSEDIIKLIEKIGWN----DPI 58
Query: 116 TIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
+ LLF+A+R + + +K++ +I+DRY +S +A+ A G+D +W K P
Sbjct: 59 LLVLLFAADRALHVNWL-SKIRNADLIILDRYYFSSIAYQGALGVDEKWIKTVNSYFPKP 117
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEH-LEFQRKVAQCY-QMLRDSSWKIIDACQSIEDVE 233
D V+ LD+P E A R +E ++ KV + Y ++ ++ ++ I+DA + +V
Sbjct: 118 DMVILLDLPIEVAISRIKNDKFNFEEKIKSLAKVREKYLKLAKEYNFYIVDANKDKNEVL 177
Query: 234 KQLKEIV 240
+Q +I+
Sbjct: 178 EQTIKII 184
>gi|72392843|ref|XP_847222.1| thymidylate kinase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62358480|gb|AAX78942.1| thymidylate kinase, putative [Trypanosoma brucei]
gi|70803252|gb|AAZ13156.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 345
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 48 IGNIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLS 107
+ N +S A++V EG D GK +Q + L+ G + FP G++I LS
Sbjct: 121 LPNNNSESAVIVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLS 180
Query: 108 NQ----SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK----- 158
+ LD LLFS NR++ + L G +++DRY S ++K
Sbjct: 181 GERGALHDLDPKLFSLLFSLNRFDTLPELRYWLTHGKKILLDRYYTSNFGHQASKLEESE 240
Query: 159 ---------GIDIEWCKAPEIGLLAPDSVLYLDIPPEKA 188
+++EW K P PD LYLD+PP A
Sbjct: 241 RSDFIRHLEQLELEWLKLP-----PPDVALYLDLPPAAA 274
>gi|396583679|ref|ZP_10484198.1| dTMP kinase [Actinomyces sp. ICM47]
gi|395548794|gb|EJG15996.1| dTMP kinase [Actinomyces sp. ICM47]
Length = 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN-QSH 111
+RG + EG D GK++Q + + E G V + R P T +G I + N
Sbjct: 3 ARGMFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPG-GTELGTEIRRLVQNGPED 61
Query: 112 LDDHTIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GID-IEWCK 166
+D T LL++A+R + +++ L+ G ++ DRY S +A+ A G+D I
Sbjct: 62 VDARTEALLYAADRAYHVATVIRPALERGAVVLGDRYIDSSLAYQGAARSLGVDEIASLS 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK--- 221
A L P LD+PPE A R +R E ++F +V Y L D+ +
Sbjct: 122 AWATQGLYPSLTFLLDLPPEVGARRRTDAPDRMERESMDFHERVRHEYLRLADAEPERIV 181
Query: 222 IIDACQSIEDVEKQLKEIVLDQ 243
+IDA ++++V +++ +++++
Sbjct: 182 VIDAVGTVDEVFSEIRGVLVER 203
>gi|219849803|ref|YP_002464236.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
gi|219544062|gb|ACL25800.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
Length = 225
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG + EG + GK++Q RL L+ G+ V L R P T +G++I L + H +
Sbjct: 3 RGLFITFEGPEGAGKSTQARRLYERLQAAGYPVILTREPG-GTRIGELIRRILIDLRHTE 61
Query: 114 --DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA-P 168
T LLFSA R + S ++ L G ++ DRY+ S A+ G D+E +
Sbjct: 62 MAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRVIT 121
Query: 169 EI--GLLAPDSVLYLDIPPEKAAERGGYGGERYEH--------------LEFQRKVAQCY 212
E+ G L PD YL I E +R + ER E L + R+V +
Sbjct: 122 EVATGGLKPDLTFYLQIDVEIGLQRKQHARERSERGGQPAEWNRLDARDLAYHRRVMHGF 181
Query: 213 QML---RDSSWKIIDACQSIEDVEKQLKEIV---LDQVT 245
L W +DA Q ++++ +Q+ V LD++T
Sbjct: 182 VELMKQEPERWHALDADQPVDELAEQIWHAVMPLLDRIT 220
>gi|317483375|ref|ZP_07942367.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA]
gi|322690345|ref|YP_004219915.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217]
gi|384202316|ref|YP_005588063.1| thymidylate kinase [Bifidobacterium longum subsp. longum KACC
91563]
gi|419847292|ref|ZP_14370469.1| dTMP kinase [Bifidobacterium longum subsp. longum 1-6B]
gi|419851146|ref|ZP_14374101.1| dTMP kinase [Bifidobacterium longum subsp. longum 35B]
gi|419853657|ref|ZP_14376465.1| dTMP kinase [Bifidobacterium longum subsp. longum 2-2B]
gi|419854971|ref|ZP_14377742.1| dTMP kinase [Bifidobacterium longum subsp. longum 44B]
gi|316915192|gb|EFV36622.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA]
gi|320455201|dbj|BAJ65823.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217]
gi|338755323|gb|AEI98312.1| thymidylate kinase [Bifidobacterium longum subsp. longum KACC
91563]
gi|386407088|gb|EIJ22073.1| dTMP kinase [Bifidobacterium longum subsp. longum 2-2B]
gi|386407108|gb|EIJ22091.1| dTMP kinase [Bifidobacterium longum subsp. longum 35B]
gi|386411185|gb|EIJ25932.1| dTMP kinase [Bifidobacterium longum subsp. longum 1-6B]
gi|386416446|gb|EIJ30944.1| dTMP kinase [Bifidobacterium longum subsp. longum 44B]
Length = 206
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-----SNQ 109
G V EG+D GKT+Q RL +YLE G +V + R P T++G+ I L
Sbjct: 3 GLFVSFEGVDGVGKTTQVERLHAYLEAQGRTVVVTREPG-GTALGKAIRQLLLHGVDGGA 61
Query: 110 SHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAP 168
+ LLF+A+R + + + L+ G +I DRY S +A+ A G ++ +
Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAY-QAGGRELTPEEIR 120
Query: 169 EIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQML---RDS 218
+ + L PD LD+ P + R + +R E +FQ + Q + L +
Sbjct: 121 SLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRTRQAFLDLAAAEPN 180
Query: 219 SWKIIDACQSIEDV----EKQLKEI 239
+++IDA QSIE V E +KE+
Sbjct: 181 RFRVIDASQSIEAVWAAIESDIKEL 205
>gi|390559753|ref|ZP_10244041.1| thymidylate kinase [Nitrolancetus hollandicus Lb]
gi|390173674|emb|CCF83340.1| thymidylate kinase [Nitrolancetus hollandicus Lb]
Length = 218
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSHLDD 114
+ LEG + GK++Q RL + L+ G+ L R P TT +G+ I A + + +
Sbjct: 4 FIALEGPEGGGKSTQARRLHAALDAQGYDAILTREPGGTT-IGEAIRAIVLADHARGMTA 62
Query: 115 HTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDI---EWCKAPE 169
T LL+ A R + + ++ L G +I DRY S +A+ A +G+DI W +A
Sbjct: 63 ETEALLYMAARAQHVADVIAPALAGGKIVICDRYIDSTLAYQGAGRGLDITSLRWLQAFA 122
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCYQMLRDSS---WK 221
+ PD V+ LD+P E R GE L+ F +V + ++ W
Sbjct: 123 GRGIRPDLVILLDVPVEVGLARKANSGEALNRLDTDEHRFHERVRTWFLEAAGAAPDRWF 182
Query: 222 IIDACQSIEDVEKQLKEIVL-----DQVTACKKGKP 252
+IDA VE+ ++ VL + + +G+P
Sbjct: 183 VIDATAPPAAVEQAVRNAVLRRLEHAEAASVVRGRP 218
>gi|373859295|ref|ZP_09602025.1| thymidylate kinase [Bacillus sp. 1NLA3E]
gi|372450964|gb|EHP24445.1| thymidylate kinase [Bacillus sp. 1NLA3E]
Length = 208
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHL 112
+G + +EG + GKT+ + L +LE +G+ V R P Q+ L+ + + +
Sbjct: 3 KGVFITIEGPEGAGKTTIINMLAQHLESVGYPVMQTREPGGIEIAEQIREVILATENTAM 62
Query: 113 DDHTIHLLFSANRWEKR-SMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDI-EWCKAPE 169
D T LL++A R + ++ L++G ++ DR+ S +A+ A+G+ I E E
Sbjct: 63 DPRTEALLYAAARRQHLIEKVKPALESGAVILCDRFIDSSLAYQGYARGLGIDEVYTINE 122
Query: 170 IGL--LAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD---S 218
+ + P LY DI PE+ +R R E ++F +KV + YQ+L
Sbjct: 123 FAIEDMMPKLTLYFDIDPEQGLKRINQHKGREVNRLDLETIDFHQKVREGYQLLITRFPK 182
Query: 219 SWKIIDACQSIEDVEKQ 235
++IDA +S+E V Q
Sbjct: 183 RIQLIDASKSVESVFNQ 199
>gi|110598215|ref|ZP_01386491.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031]
gi|110340130|gb|EAT58629.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031]
Length = 212
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GK++Q +L+SYL G V R P T ++ L ++ +
Sbjct: 2 LITFEGIDGAGKSTQIKKLVSYLADSGREVLTLREPGGTEVAEKIRLILLESRHEISPVG 61
Query: 117 IHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL-- 172
LLFSA+R E +++ L +I+DR+ S A+ +GID+E ++ I +
Sbjct: 62 ELLLFSASRAELIHEVIKPALAENKIVILDRFFDSTTAYQGYGRGIDLELLRSI-IAIST 120
Query: 173 --LAPDSVLYLDIPPEKAAERGGYGG-----------ERYEH--LEFQRKVAQCY-QMLR 216
+ PD YLDI PE+A R +R E L+F + V Q Y +L+
Sbjct: 121 CGITPDITFYLDIKPEEALSRKFSAKSIPLAFDSSELDRMERSGLQFYQNVRQGYLNILK 180
Query: 217 DSSWKI--IDACQSIEDVEKQL 236
+S+ ++ ++A + E++ +++
Sbjct: 181 ESNGRMFCLNALEKPEEIHRRI 202
>gi|298246531|ref|ZP_06970337.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
gi|297554012|gb|EFH87877.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
Length = 260
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL--WR---FPDRTTSVGQMISAYLSNQ 109
G L ++EG+D GK++Q + L +L G+SV W +TTS G+
Sbjct: 11 GKLFIVEGIDGSGKSTQIALLRQWLISQGYSVFFSEWNSSPLVKQTTSRGKKKQILTPTT 70
Query: 110 SHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPE 169
L IH A+R E + LKAG ++ DRY Y+ A +A+G++ W +
Sbjct: 71 FSL----IHATDFADRTEHDII--PPLKAGAIVLADRYIYTAFARDAARGVNRTWVRELY 124
Query: 170 IGLLAPDSVLYLDIP------------PE-KAAERG---GYGGERYEHLE-FQRKVAQCY 212
+ P Y +P P+ K E G G + YE + FQ +V Q Y
Sbjct: 125 RFAVQPTLAFYYRVPLSLSLRRIMNGRPQLKYYEAGMDLGLSTDPYESFKLFQHRVVQEY 184
Query: 213 Q-MLRDSSWKIIDACQSIEDVEKQLKEIVLDQVTACKK 249
+ ++ + ++DA SI++ ++ ++E+VL + ++
Sbjct: 185 EAIVEEFELTVMDATLSIQEQQRHMRELVLPHLEGVRR 222
>gi|115377200|ref|ZP_01464412.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
gi|310821205|ref|YP_003953563.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
gi|115365783|gb|EAU64806.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
gi|309394277|gb|ADO71736.1| Thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
Length = 220
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ---- 109
RG +VLEGLD G T+Q RL + L GH+V R P +G MI L+ +
Sbjct: 10 RGRFIVLEGLDGAGTTTQAERLAAALRAEGHAVLTTREPS-DGPIGTMIRQALTGRLVLP 68
Query: 110 ---SHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
L T+ LL++A+R + ++ + L+AG ++ DRY S +A+ A + + W
Sbjct: 69 QGAGPLAPETLALLYAADRTDHLKAKVLPALEAGHIVLSDRYVLSSLAYQGA-ALAMAWV 127
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGG---ERYEHLEFQRKVAQCYQML---RDSS 219
+A ++PD L++ + P AA R G E +E QR++A+ Y+ R+S
Sbjct: 128 EAVNGHAVSPDLTLFVHVSPAVAARRRAARGAAKELFEEDTLQRRIARQYEEAIRRRESQ 187
Query: 220 WKI--IDACQSIEDV-EKQLKEI 239
I ID Q++E V E L EI
Sbjct: 188 ETIVRIDGEQAVEAVTEAALVEI 210
>gi|455649444|gb|EMF28257.1| thymidylate kinase [Streptomyces gancidicus BKS 13-15]
Length = 1020
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ GH V L R P T VG+ + + L + S L
Sbjct: 465 GFFIALEGGDGAGKSTQAEALADWIRAKGHEVVLTREPG-ATPVGKRLRSILLDVSSAGL 523
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LL++A+R E +++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 524 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGA-GRDLSPTEIARIN 582
Query: 172 L-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
L P+ + LD+ PE A ER +R E EF +V + L + +
Sbjct: 583 RWATAGLVPNLTVLLDVAPETARERFTEAPDRLESEPAEFHARVRSGFLTLAAADPGRYL 642
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q E V ++ LD+V
Sbjct: 643 VVDAGQEPEAVTTVIRH-RLDRV 664
>gi|304390265|ref|ZP_07372219.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315657530|ref|ZP_07910412.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|304326747|gb|EFL93991.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315492002|gb|EFU81611.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 239
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 38 FRMESSSSL-RIGNI-DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT 95
FR +++ R+ I ++G V EG D GKT+Q +R S++ G V R P
Sbjct: 12 FRPQTNVDFGRVAEIRPAQGLFVAFEGCDGVGKTTQITRAASWVREQGWDVVETREPG-G 70
Query: 96 TSVGQMISAYLSNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAF 154
T +G + L + + LLF+A+R + ++ + G +I DRY S +A+
Sbjct: 71 TDLGVALRQLLLDAGDVSPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAY 130
Query: 155 S------SAKGI-DIE-WCKAPEIGLLAPDSVLYLDIPPEKAAERGGY-----GGERYEH 201
A+ I D+ W G L P+ + LD+ PE AAER G +R E
Sbjct: 131 QGHGRELGAREIRDLSLWAT----GGLVPNLTVLLDLDPEVAAERQAADASLGGPDRMER 186
Query: 202 --LEFQRKVAQCYQMLRDS--SWKIIDACQSIEDVEKQLK 237
+EFQ++V + + + + +W ++DA + ++ Q++
Sbjct: 187 AGIEFQKRVREDFLRMSEGQDTWLVVDASLPVAEIATQVR 226
>gi|345000547|ref|YP_004803401.1| thymidylate kinase [Streptomyces sp. SirexAA-E]
gi|344316173|gb|AEN10861.1| thymidylate kinase [Streptomyces sp. SirexAA-E]
Length = 1023
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 16 GALFVRRSKFHLNCLPKCSCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQ 71
GAL + + L + S P R + +LR G+ + G + +EG D GK++Q
Sbjct: 464 GALLLPVAVIVLARIDDRSGVPLRRDLRDALRGGDPAVAPAATGFFLAVEGGDGAGKSTQ 523
Query: 72 CSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK- 128
L ++ GH V + R P T +G+ + + L + S L + LL++A+R E
Sbjct: 524 VEALAEWIRAKGHEVVVTREPG-ATPIGKRLRSILLDVSSAGLSNRAEALLYAADRAEHV 582
Query: 129 RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDI 183
S++ L+ G +I DRY S VA+ A G D+ + I L P + LD+
Sbjct: 583 DSVVRPALERGAIVISDRYIDSSVAYQGA-GRDLSPTEIARISRWATSGLVPHLTVLLDV 641
Query: 184 PPEKAAERGGYGGERYEHL--EFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
PE A ER +R E EF +V + L ++ + ++DA Q E +
Sbjct: 642 DPETARERFTEAPDRLESEPPEFHNRVRSGFLTLAAAAPLRYLVVDAAQEPEAI 695
>gi|408530315|emb|CCK28489.1| thymidylate kinase [Streptomyces davawensis JCM 4913]
Length = 1064
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G V LEG D GK++Q L ++ GH V + R P T VG+ + + L + S L
Sbjct: 509 GFFVALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPG-ATPVGKRLRSILLDVSSAGL 567
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
LL++A+R E +++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGA-GRDLSPTEIARIN 626
Query: 172 L-----LAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
L P + LD+ PE A ER +R E EF +V + L S +
Sbjct: 627 RWATNGLVPHLTVLLDVDPETARERFTEAPDRLESEPAEFHARVRSGFLTLAASDPGRYL 686
Query: 222 IIDACQSIEDVEKQLKEIVLDQ 243
++DA Q E V ++ LDQ
Sbjct: 687 VVDAGQDPESVTTVIRH-RLDQ 707
>gi|428298321|ref|YP_007136627.1| thymidylate kinase [Calothrix sp. PCC 6303]
gi|428234865|gb|AFZ00655.1| thymidylate kinase [Calothrix sp. PCC 6303]
Length = 209
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V EG++ CGKT+Q +L LG +V R P T +G + L ++
Sbjct: 3 GKLIVFEGVEGCGKTTQMQMTGEWLRSLGVAVVTTREPG-GTELGVKLRRLLLEKTEGET 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID---IEWCK 166
+ D T LL++A+R + + ++ LK G ++ DR+ S +A+ +G+D I
Sbjct: 62 IADRTELLLYAADRAQHVEADLKPNLKQGKIILCDRFVDSTIAYQGYGRGLDMHLIHQLN 121
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGE-----RYEHLEFQRKVAQCYQMLRDSS-- 219
G L D L+ D+ E +R GE E + F +V Q Y + S
Sbjct: 122 QIATGGLESDITLWFDLDAEVGLKRKRRSGEIADRIEQEEITFHLRVQQGYAEIAASQPQ 181
Query: 220 -WKIIDACQSIEDVEKQLKEIVLDQV 244
K IDA + E V+KQ++E++ + +
Sbjct: 182 RVKKIDASLAPELVQKQIQEVLTNNL 207
>gi|312866475|ref|ZP_07726693.1| dTMP kinase [Streptococcus downei F0415]
gi|311098169|gb|EFQ56395.1| dTMP kinase [Streptococcus downei F0415]
Length = 206
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 21/194 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN--QSHLDD 114
++ LEG D GKTS RL+ LE GH V R P ++ + I + + + +D+
Sbjct: 1 MITLEGPDGAGKTSVLERLVPLLEAQGHQVVTTREPG-GVAIAESIREVILDVKNTAMDE 59
Query: 115 HTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEWCKA 167
T LL+ A R ++ +E L G ++VDR+ S VA+ +G+ DI+W
Sbjct: 60 KTELLLYIAAR--RQHFVEKVLPDLAQGKLVLVDRFIDSSVAYQGYGRGLSVTDIDWLND 117
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRDSS-- 219
I PD L D+P E R R E L+ ++V Q Y L S
Sbjct: 118 YAIEDTKPDLTLLFDLPSELGLARIEQAEVREVNRLDLEKLDMHQRVRQGYLELAKSQPE 177
Query: 220 -WKIIDACQSIEDV 232
K+IDA Q +E V
Sbjct: 178 RIKVIDAAQELEKV 191
>gi|291452943|ref|ZP_06592333.1| thymidylate kinase [Streptomyces albus J1074]
gi|291355892|gb|EFE82794.1| thymidylate kinase [Streptomyces albus J1074]
Length = 1104
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--L 112
G + LEG D GK++Q L ++ GH V + R P T +G+ + A L + S L
Sbjct: 508 GFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPG-ATPIGKRLRAILLDVSSAGL 566
Query: 113 DDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI- 170
LL++A+R E +++ L+ G +I DRY S VA+ A G D+ + I
Sbjct: 567 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGA-GRDLAPTEIARIS 625
Query: 171 ----GLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS---WK 221
G L P + LD+ PE A ER +R E F ++V + L + +
Sbjct: 626 RWATGGLVPHLTVLLDVSPETARERFTEAPDRLESEPAAFHQRVRAGFLTLAAADQDRYL 685
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
++DA Q E+V ++ LDQ+
Sbjct: 686 VVDAGQQPEEVTTVVRH-RLDQL 707
>gi|123965393|ref|YP_001010474.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
gi|166223101|sp|A2BUA6.1|KTHY_PROM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|123199759|gb|ABM71367.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 210
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEG---LGHSVELW--RFPDRTTSVGQMISAYLSN 108
+G +V+EG+D CGKT+Q + +L +G + +L R P + ++ + L N
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDEISRWLPTSGLMGKNSKLIKTREPGGSLLGKKLRNLILDN 61
Query: 109 QSHLDDHTIH--LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW 164
+ ++ LL+SA+R E S ++ LK +I DR+S S +A+ + I++E
Sbjct: 62 NKNNKPSSLAELLLYSADRAEHVSKIISPALKKEDWVISDRFSDSTLAYQGYGRHINLEI 121
Query: 165 CKAPEIGLLA---PDSVLYLDIPPEKAA-ERGGYGGERYEH--LEFQRKVAQCYQML-RD 217
K E + PD ++L+I E++ R + +R E + F +KV + ++++ ++
Sbjct: 122 IKNIESIVCQGEYPDLTIFLEISAEESILRRKNFVPDRMESEGINFLQKVNEGFKLIAKE 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVL 241
WK+I A Q+I + ++KE +L
Sbjct: 182 KKWKVISATQNITAISNEIKETLL 205
>gi|148264685|ref|YP_001231391.1| thymidylate kinase [Geobacter uraniireducens Rf4]
gi|146398185|gb|ABQ26818.1| thymidylate kinase [Geobacter uraniireducens Rf4]
Length = 226
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 21/147 (14%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ----- 109
G L+V+EG D G+++Q + L YLEG GH+ T VG S +S +
Sbjct: 18 GKLIVIEGADGSGRSTQMALLKDYLEGRGHA---------TVDVGLRRSTLVSEELQEAK 68
Query: 110 --SHLDDHTIHLLFS---ANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
+ L + T L ++ A++ E R + L+AG ++ DRY Y+ +A +G D +W
Sbjct: 69 QGNVLGEITRSLFYATDFADQLENRII--PALRAGFIVLADRYIYTLMARDIVRGADRDW 126
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAER 191
++ L PD V+YL + P + ER
Sbjct: 127 VRSLYGLALVPDLVIYLRVSPSQLVER 153
>gi|312128608|ref|YP_003993482.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
gi|311778627|gb|ADQ08113.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
Length = 249
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G L V+EG D GK++Q L +LE LG++V + ++ + + + ++ L
Sbjct: 17 GRLFVVEGCDGSGKSTQVHLLKKWLEFLGYTVFFTEW--NSSDLVKNATKKAKKKNLLTP 74
Query: 115 HTIHLLFS---ANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIG 171
T LL + A+R+E+ ++ L+AG ++ DRY Y+ A A+G + EW K
Sbjct: 75 TTFSLLHACDFADRYER--LILPHLRAGYIVLCDRYIYTAYARDIARGCNPEWVKTVYDF 132
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLE-----------------FQRKVAQCYQM 214
+ P Y +P + A +R G + ++ E +Q K+ Q Y M
Sbjct: 133 AVKPTVTFYFKVPVDVAIDRILMGRTQIKYYEAGMDLGLSTDTVESFKLYQSKIIQMYDM 192
Query: 215 LRDSSWKI-IDACQSIEDVEKQLKEIV 240
L + I ID SI +K ++EIV
Sbjct: 193 LAEQEGFITIDGTLSIRQQQKMVREIV 219
>gi|306817710|ref|ZP_07451452.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
gi|304649524|gb|EFM46807.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
Length = 246
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN---- 108
+RGA V EG D GK++Q +++ G V R P T++G+ + L
Sbjct: 29 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPG-GTNLGRQLRELLLEAGET 87
Query: 109 ---QSHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
+ + LLF+A+R + + ++ L AG +I DR+ S VA+ +G D+
Sbjct: 88 TVCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAY-QGQGRDLGP 146
Query: 165 CKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERY-------EHLEFQRKVAQCY 212
+ ++ L L P+ + LD+ PE A ER R E LEFQRKV +
Sbjct: 147 KEIRDLSLWATGGLTPNLTVLLDLDPEIAWERQQNDETRVSPDRMEGEGLEFQRKVRARF 206
Query: 213 QMLRDS--SWKIIDACQSIEDVEKQLK 237
+ L + +W ++DA + E++ Q++
Sbjct: 207 RRLAEGNETWMVVDASLAPEEIAAQVR 233
>gi|302390839|ref|YP_003826659.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501]
gi|302202916|gb|ADL11594.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501]
Length = 210
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
+G + LEG + GK++Q L Y G+ V R P T +G I L SN +
Sbjct: 2 KGLFITLEGPEGAGKSTQIELLNKYFSEQGYEVVQTREPG-GTEIGSRIRNILLDSNLDN 60
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGID---IEWCK 166
L+ T LL++A+R + +++ LK G +I DR+S + +A+ + +D I
Sbjct: 61 LEPKTELLLYAASRAQHVNEVIKPALKEGKVIICDRFSDATLAYQGYGRRLDKDLILKLN 120
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGG----ERYEHLEFQRKVAQCYQML--RDSSW 220
G L PD LDI PE+ R ER E L F ++V Y L + S +
Sbjct: 121 QMATGGLEPDLTFLLDIEPEEGLLRTKNEVRDRIER-EDLSFHQQVRDGYLKLAEKKSRF 179
Query: 221 KIIDACQSIEDVEKQLKEIV 240
++ID QSIE++ L E +
Sbjct: 180 EVIDGSQSIENIFDNLIETL 199
>gi|225351239|ref|ZP_03742262.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158695|gb|EEG71937.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
++ +G + EG+D GKT+Q RL +Y+E G + R P T +G I L
Sbjct: 1 MNMQGIFISFEGVDGVGKTTQVERLRAYVEAQGRECVVTREPGGTV-LGVAIRKLLLGGV 59
Query: 111 HLDDHTI-----HLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
D I LLF+A+R + + ++ L+ G +I DRY S +A+ A G ++
Sbjct: 60 EGSDADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAY-QAGGRELTA 118
Query: 165 CKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQMLRD 217
+ ++ + L P+ LD+ P ++ R + +R E +FQR+ Q + L
Sbjct: 119 GEIRDLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRTRQAFLDLAK 178
Query: 218 SS---WKIIDACQSIEDV 232
+ +++IDA QSI++V
Sbjct: 179 AESQRFRVIDASQSIDEV 196
>gi|50365491|ref|YP_053916.1| thymidylate kinase [Mesoplasma florum L1]
gi|59798247|sp|Q6F0E1.1|KTHY_MESFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|50364047|gb|AAT76032.1| thymidylate kinase [Mesoplasma florum L1]
Length = 211
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS--HLDD 114
+ +EG+D GKT+ R+ YLE L + V + R P + + I + N+ ++
Sbjct: 2 FITIEGMDGSGKTTALQRVKQYLEDLNYKVVMTREPG-GLPLSEKIRELILNKDGVGMEP 60
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGL 172
T LLF A R E +++ LK G +I DR+ S A+ A+G+ +++ + +
Sbjct: 61 WTEALLFIAARKEHLEKVIKPYLKKGYIVISDRFMDSTTAYQGGARGLGVDYLNELQKNI 120
Query: 173 LA---PDSVLYLDIPPEKAAERGGYGGERYEHLE-----FQRKVAQCYQML---RDSSWK 221
L PD LY ++ E A +R E L+ F+ V ++ L +
Sbjct: 121 LEGFLPDLTLYFELSFEDAEKRLSARPEEKNRLDEEGRKFKEAVKLAFEELVVKEPNRIT 180
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
+IDA +S E+V ++ K+++L+++ KK K
Sbjct: 181 VIDASKSPEEVFEETKKVILEKIELWKKEK 210
>gi|429123165|ref|ZP_19183698.1| thymidylate kinase [Brachyspira hampsonii 30446]
gi|426280978|gb|EKV57981.1| thymidylate kinase [Brachyspira hampsonii 30446]
Length = 203
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQ-----MISAYLSN 108
G L+VLEG+D GK+S L L LG ++ F G M+S L
Sbjct: 2 EGKLIVLEGIDGSGKSSIGMMLTDTLNSLGIK-SIYTFEPTHAYYGSKLRESMLSKDLKP 60
Query: 109 QSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC-K 166
+ L LF A+R E + M++ + G +++DRY YS +A+ AKGID E+
Sbjct: 61 EEELS------LFIADRKEHIKHMIKPAINDGYVIVLDRYIYSSIAYQGAKGIDKEYIYN 114
Query: 167 APEIGLLAPDSV--LYLDIPP--EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI 222
+ +L PD V L+LDI + E+ G+ +R+E+ + +V + + S
Sbjct: 115 LHKDFILQPDIVFILHLDIETALNRIMEKRGF-VDRFENKNYLEEVDKIFCSFDASYIHH 173
Query: 223 IDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +S ++ +K+ +L+ + K
Sbjct: 174 IDASKS----QQSIKDEILNTIKESK 195
>gi|407713379|ref|YP_006833944.1| dTMP kinase [Burkholderia phenoliruptrix BR3459a]
gi|407235563|gb|AFT85762.1| dTMP kinase [Burkholderia phenoliruptrix BR3459a]
Length = 206
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCS----RLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG V EG+D GKT+ + RL + G SV + R P T +G+ I + +
Sbjct: 2 ARGKFVTFEGIDGAGKTTHLAWFRERLEQKVAATGRSVVMTREPG-GTPLGEQIREIVLH 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKA 167
Q + L+F+ R ++E L G ++ DR++ + A+ +G+ + +
Sbjct: 61 QKMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDKLET 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+ PE A ER +R+E F+R A+ + ++
Sbjct: 121 LERWVQGGFQPDLTVLFDLAPEIANERRSAARDPDRFESESAAFFERTRAEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIVL 241
++ IID+ QSI ++KQL+E++L
Sbjct: 181 YRFAIIDSSQSIVRIQKQLEELIL 204
>gi|338730636|ref|YP_004660028.1| thymidylate kinase [Thermotoga thermarum DSM 5069]
gi|335364987|gb|AEH50932.1| thymidylate kinase [Thermotoga thermarum DSM 5069]
Length = 201
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HLDDH 115
+ EG+D GK +Q YL+ G + R P T VG++I + L N +
Sbjct: 2 FISFEGIDGSGKGTQIKLFAEYLQKKGIDFVIVREPG-GTEVGELIRSLLLNSDLKIYPR 60
Query: 116 TIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGLL 173
T LLF A+R + ++ L+AG T+I DR+ S VA+ +GI E + E+
Sbjct: 61 TELLLFLASRAQIVDEVILPALRAGKTVISDRFIDSSVAYQGVGRGIGFELVE--ELNRF 118
Query: 174 A-----PDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSSWK---II 223
A PD YLDI PE + +R +R E +EF KV + Y M+ +I
Sbjct: 119 ATSDVKPDLTFYLDITPETSLKRKMI-KDRMEKNGIEFLNKVREAYLMIAQKEPNRVVVI 177
Query: 224 DACQSIEDVEKQLKEI 239
+ ++I+++ ++ EI
Sbjct: 178 NGERNIDEIHAEIVEI 193
>gi|298345977|ref|YP_003718664.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
gi|298236038|gb|ADI67170.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
Length = 239
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 38 FRMESSSSL-RIGNI-DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRT 95
FR +++ R+ I ++G V EG D GKT+Q +R S++ G V R P
Sbjct: 12 FRPQTNVDFGRVAEIRPAQGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPG-G 70
Query: 96 TSVGQMISAYLSNQSHLDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAF 154
T +G + L + + LLF+A+R + ++ + G +I DRY S +A+
Sbjct: 71 TDLGVALRQLLLDAGDVSPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAY 130
Query: 155 S------SAKGI-DIE-WCKAPEIGLLAPDSVLYLDIPPEKAAERGGY-----GGERYEH 201
A+ I D+ W G L P+ + LD+ PE AAER G +R E
Sbjct: 131 QGHGRELGAREIRDLSLWAT----GGLVPNLTVLLDLDPEVAAERQAADASLGGPDRMER 186
Query: 202 --LEFQRKVAQCYQMLRDS--SWKIIDACQSIEDVEKQLK 237
+EFQ++V + + + + +W ++DA + ++ Q++
Sbjct: 187 AGIEFQKRVREDFLRMSEGQDTWLVVDASLPVAEIATQVR 226
>gi|212716794|ref|ZP_03324922.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660498|gb|EEB21073.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 217
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + EG+D GKT+Q RL +Y+E G + R P T +G I L
Sbjct: 2 QGIFISFEGIDGVGKTTQVERLRAYVEAQGRECVVTREPGGTV-LGVAIRKLLLGGVEGS 60
Query: 114 DHTI-----HLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
D I LLF+A+R + + ++ L+ G +I DRY S +A+ A G ++ +
Sbjct: 61 DADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAY-QAGGRELTAGEI 119
Query: 168 PEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQMLRDSS- 219
++ + L P+ LD+ P ++ R + +R E +FQR+ Q + L +
Sbjct: 120 RDLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRTRQAFLDLAKAES 179
Query: 220 --WKIIDACQSIEDV 232
+++IDA QSI++V
Sbjct: 180 QRFRVIDASQSIDEV 194
>gi|158423797|ref|YP_001525089.1| thymidylate kinase [Azorhizobium caulinodans ORS 571]
gi|158330686|dbj|BAF88171.1| thymidylate kinase [Azorhizobium caulinodans ORS 571]
Length = 235
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+RG + LEG + GK++Q RL + L+ G V L R P + + LS +
Sbjct: 4 ARGRFITLEGGEGTGKSTQARRLAAALQKGGLEVVLTREPGGSAGAEAVRHVLLSGAAKD 63
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGI-------DIE 163
LLF+A R + S++ L AG +I DR+ S + A G +E
Sbjct: 64 FGPQGEALLFAAARADHVDSLIRPALAAGKWVICDRFIDSTRVYQGAVGAVPGALLDSLE 123
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEH--LEFQRKVAQCYQMLRD 217
W A E PD L LD+PPE +AA R G G +R+E L F +V + L
Sbjct: 124 WVAAAEA---RPDLTLVLDVPPEVGLSRAAGR-GEGADRFESEGLAFHTRVRDAFLALAK 179
Query: 218 SSWK---IIDACQSIEDV 232
+ I+DA +DV
Sbjct: 180 ADPARCVIVDASGGPDDV 197
>gi|227827632|ref|YP_002829412.1| dTMP kinase [Sulfolobus islandicus M.14.25]
gi|229584836|ref|YP_002843338.1| dTMP kinase [Sulfolobus islandicus M.16.27]
gi|238619800|ref|YP_002914626.1| dTMP kinase [Sulfolobus islandicus M.16.4]
gi|385773302|ref|YP_005645868.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
gi|385775934|ref|YP_005648502.1| dTMP kinase [Sulfolobus islandicus REY15A]
gi|227459428|gb|ACP38114.1| dTMP kinase [Sulfolobus islandicus M.14.25]
gi|228019886|gb|ACP55293.1| dTMP kinase [Sulfolobus islandicus M.16.27]
gi|238380870|gb|ACR41958.1| dTMP kinase [Sulfolobus islandicus M.16.4]
gi|323474682|gb|ADX85288.1| dTMP kinase [Sulfolobus islandicus REY15A]
gi|323477416|gb|ADX82654.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
Length = 189
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEG-LGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
L+ +EG+D GKT+ + L +LE + +V + R P + + ++I N D
Sbjct: 4 LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREP-FSEDIIKLIEKIGWN----DPI 58
Query: 116 TIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
+ LLF+A+R E +K+K +I+DRY +S +A+ A G+D +W K P
Sbjct: 59 LLVLLFAADR-EIHVNWLSKIKDADLIILDRYYFSSIAYQGALGVDEQWIKMVNSYFPKP 117
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEH-LEFQRKVAQCY-QMLRDSSWKIIDACQSIEDVE 233
D V+ LD+P E A R +E ++ KV + Y ++ ++ ++ I+DA + +V
Sbjct: 118 DMVILLDLPIEVAISRIKNDKFNFEEKIKSLAKVREKYLKLAKEYNFYIVDASKDKNEVL 177
Query: 234 KQLKEIV 240
+Q +I+
Sbjct: 178 EQAIKII 184
>gi|415719303|ref|ZP_11467653.1| thymidylate kinase [Gardnerella vaginalis 1500E]
gi|388059244|gb|EIK81986.1| thymidylate kinase [Gardnerella vaginalis 1500E]
Length = 234
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+++G + EG+D GKT+Q L +L+ LG V + R P T +G+ + L + S+
Sbjct: 27 ENKGLFISFEGIDGVGKTTQVEALKKHLQSLGREVVVTREPG-GTDLGKSLREILLHGSY 85
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI-------- 162
+ T LLF+A+R + + ++ L G +I DRY S +A+ A G ++
Sbjct: 86 VSSRTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAY-QAGGRELTMDDVRTL 144
Query: 163 -EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS 219
EW L P+ LD+ PE A ER +R E ++F R+ + + L S
Sbjct: 145 SEWATDS----LWPNRTYLLDMQPEAAFERLHREQDRMESAGIDFARRTREAFLDLAQES 200
Query: 220 ---WKIIDAC 226
++++DA
Sbjct: 201 ADRYRVLDAT 210
>gi|415708358|ref|ZP_11462457.1| thymidylate kinase [Gardnerella vaginalis 6420LIT]
gi|415708976|ref|ZP_11462823.1| thymidylate kinase [Gardnerella vaginalis 6420B]
gi|388054898|gb|EIK77832.1| thymidylate kinase [Gardnerella vaginalis 6420LIT]
gi|388056815|gb|EIK79670.1| thymidylate kinase [Gardnerella vaginalis 6420B]
Length = 234
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
++G + EG+D GKT+Q L YL+ LG V + R P T +G+ + L + + +
Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPG-GTQLGKTLREILLHGTSV 86
Query: 113 DDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDI--------- 162
T LLF+A+R + + ++ L G +I DRY S +A+ A G ++
Sbjct: 87 SARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAY-QAGGRELTMDDVRTLS 145
Query: 163 EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH--LEFQRKVAQCYQMLRDSS- 219
EW L P+ LD+ PE A +R +R E ++F R+ + + L S
Sbjct: 146 EWATDS----LWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRTREAFLDLAQESA 201
Query: 220 --WKIIDACQSIEDVEKQLKEIVLDQV 244
++++DA S K L E+++ V
Sbjct: 202 DRYRVLDATFSA----KSLSELIVQDV 224
>gi|312864169|ref|ZP_07724403.1| dTMP kinase [Streptococcus vestibularis F0396]
gi|322517269|ref|ZP_08070148.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124]
gi|311100170|gb|EFQ58379.1| dTMP kinase [Streptococcus vestibularis F0396]
gi|322124175|gb|EFX95709.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124]
Length = 209
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLS-NQS 110
S+G L+ +EG D GKT+ LL L E V R P Q+ L N +
Sbjct: 2 SKGLLISIEGPDGAGKTTVLEALLPRLREAYPAKVVTTREPGGVAIAEQIREVILDVNNT 61
Query: 111 HLDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFS-SAKGID---IE 163
+D T LL+ A R ++ ++E +L+ G +I+DR+ S VA+ + +G++ I
Sbjct: 62 AMDAKTELLLYIAAR--RQHLVERVLPELEEGNMVIMDRFIDSSVAYQGTGRGLNQDEIA 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W A PD L D+ E R GER E L+ ++V Q Y L
Sbjct: 120 WLNAYATDGYKPDVTLLFDVDSETGLARIAANGEREVNRLDLEKLDLHQRVRQGYLDLAQ 179
Query: 218 SS---WKIIDACQSIEDV 232
+ KIIDA Q+ EDV
Sbjct: 180 AEPERIKIIDASQAFEDV 197
>gi|296128436|ref|YP_003635686.1| thymidylate kinase [Cellulomonas flavigena DSM 20109]
gi|296020251|gb|ADG73487.1| thymidylate kinase [Cellulomonas flavigena DSM 20109]
Length = 224
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G V EG D GK++Q + L +L LG V + R P T +G + + + LD
Sbjct: 16 GVFVSFEGGDGVGKSTQVALLGHHLAALGREVVVTREPG-GTPLGIELRRAVLHGDELDP 74
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGI---DIEWCKAPE 169
T LL++A+R S++ L G ++ DRY S VA+ S +G+ ++E
Sbjct: 75 RTEALLYAADRAHHVASLVRPALARGAVVLTDRYLDSSVAYQGSGRGLGADEVERLSLWA 134
Query: 170 IGLLAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCY---QMLRDSSWKIID 224
+ L P + LD+ P R +R E EF R+ + + + W ++D
Sbjct: 135 VDELLPHLTVLLDLDPVVGLARLTGDPDRLESAGDEFHRRTREAFLARAAADPARWLVLD 194
Query: 225 ACQSIEDVEKQLKE 238
A Q EDV Q++E
Sbjct: 195 ASQPAEDVAAQVRE 208
>gi|121607993|ref|YP_995800.1| dTMP kinase [Verminephrobacter eiseniae EF01-2]
gi|166223126|sp|A1WGM5.1|KTHY_VEREI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|121552633|gb|ABM56782.1| thymidylate kinase [Verminephrobacter eiseniae EF01-2]
Length = 226
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + EG+D GK+S L + G V + R P T ++ + L+ +
Sbjct: 5 GLFISFEGIDGAGKSSHVEGLAAAFRAQGRRVTVSREPGGTPLAEKLRALLLAERMDALT 64
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIE---------- 163
++ L+F+A R R ++E L G ++ DR++ S A+ A +G D E
Sbjct: 65 ESL-LIFAARRDHLRQVIEPALARGDVVLCDRFTDSTFAYQGAGRGFDHETLSILERMTN 123
Query: 164 WCKAPEIGLLA-PDSVLYLDIPPEKAAER---GGYGGERYEH--LEFQRKVAQCYQMLRD 217
A + GLL P+ L+ D+ PE AAER + +R+E +EF R+VA+ Y
Sbjct: 124 TAAAHKDGLLPEPELTLWFDLAPELAAERMAGAAHRPDRFEAQPVEFFRRVARGYADRAA 183
Query: 218 SSWKI---IDACQSIEDVEKQLKEIVL 241
++ + IDA Q V +QL++ ++
Sbjct: 184 AAPRRIVRIDAAQECHRVRQQLRDALV 210
>gi|357412636|ref|YP_004924372.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331]
gi|320010005|gb|ADW04855.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331]
Length = 1036
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 34 SCTPFRMESSSSLRIGNID----SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW 89
S P R + +LR G+ + G +VLEG D GK++Q + ++ GH V +
Sbjct: 482 SGVPLRRDLREALRGGDPAVTPAANGFFLVLEGGDGAGKSTQVEAIAEWIRAKGHEVVVT 541
Query: 90 RFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDR 146
R P T +G+ + + L + S L + LL++A+R E S++ L+ G +I DR
Sbjct: 542 REPG-ATPIGKRLRSILLDVSSAGLSNRAEALLYAADRAEHVDSVVRPALERGAIVISDR 600
Query: 147 YSYSGVAFSSAKGIDIEWCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEH 201
Y S VA+ A G D+ + I L P + LD+ P+ A ER +R E
Sbjct: 601 YIDSSVAYQGA-GRDLAPTEIARISRWATSGLVPHLTVLLDVDPQTARERFTEAPDRLES 659
Query: 202 --LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
EF +V + L + + ++DA Q E +
Sbjct: 660 EPAEFHDRVRSGFLTLAAADPARYLVVDAGQEAEAI 695
>gi|221632235|ref|YP_002521456.1| thymidylate kinase [Thermomicrobium roseum DSM 5159]
gi|254808313|sp|B9KXL4.1|KTHY_THERP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|221155655|gb|ACM04782.1| thymidylate kinase [Thermomicrobium roseum DSM 5159]
Length = 210
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+ EG + GKT+QC+ L + L G+S+ + R P T +G+ I +L L T
Sbjct: 4 FITFEGPEGAGKTTQCALLAARLREAGYSLLVTREPG-GTPLGETIREWLLAGEALRPET 62
Query: 117 IHLLFSANR----WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPE-- 169
LLF+A R W++ + L+ GT ++ DRY S +A+ A +G+D W +
Sbjct: 63 EALLFTAARAEHVWDR---IRPALERGTIVLCDRYVDSTLAYQGAGRGLDEGWLRELHRI 119
Query: 170 -IGLLAPDSVLYLDIPPEKAAERGGYGGERY-----EHLEFQRKVAQCYQML--RDSS-W 220
G L PD + LD+P E R E L F R+V Y RD W
Sbjct: 120 ATGDLWPDLTILLDVPVEVGLARRRAAAATITRLDQEELAFHRRVRAWYHAAAQRDPQRW 179
Query: 221 KIIDACQSIEDVEKQLKEIVLDQVTACKKGK 251
+++DA E V + V + K+G+
Sbjct: 180 RVVDATLPPEVVADAVWATVTE---VMKRGR 207
>gi|220911618|ref|YP_002486927.1| dTMP kinase [Arthrobacter chlorophenolicus A6]
gi|219858496|gb|ACL38838.1| dTMP kinase [Arthrobacter chlorophenolicus A6]
Length = 232
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 50 NIDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--S 107
N S G + EG D GK++Q +RL LE G +V R P T +G+ + + +
Sbjct: 2 NKHSAGLFIAFEGGDGAGKSTQAARLAEALESRGLTVLRTREPG-GTPIGEKLRSLVLDH 60
Query: 108 NQSHLDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDI- 162
H+D HT L+F+A+R ++ L+ G ++ DRY S VA+ A G+D
Sbjct: 61 GHGHIDAHTEALIFAASRAAHAGQVIRPALERGDIVLTDRYIDSSVAYQGAGRDLGMDAV 120
Query: 163 ----EWCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHL-----EFQRKVAQCYQ 213
EW + L P + LD+ PE R G + L EF ++ + +
Sbjct: 121 RSLNEWATSG----LQPHLTVLLDVEPEVGRTRRTAGDATEDRLESEADEFHARIREAFL 176
Query: 214 ML---RDSSWKIIDACQSIEDVEKQLKEIVLDQV 244
L R +S+ ++ A + D L ++LD+V
Sbjct: 177 DLAAARPASYLVLPARLPVND----LAAMILDRV 206
>gi|385832241|ref|YP_005870016.1| thymidylate kinase [Lactococcus garvieae Lg2]
gi|343181394|dbj|BAK59732.1| thymidylate kinase [Lactococcus garvieae Lg2]
Length = 209
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ-SHLD 113
G L+ LEG D GKT+ R+L LE + + R P ++ + LS + + +D
Sbjct: 3 GILISLEGPDGAGKTTVLQRILPELEKTSYKILSTREPGGVRVAEEIRNIILSTENTEID 62
Query: 114 DHTIHLLF-SANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSS---AKGID-IEWCKAP 168
T +LF +A R ++ M L AG +IVDR+ S VA+ G++ + W
Sbjct: 63 SKTELMLFAAARRLHMQTKMLPALAAGEMVIVDRFIDSSVAYQGYGRELGVEPVNWLNEF 122
Query: 169 EIGLLAPDSVLYLDIPPEKAAERGGYG-GERYEHLEFQRKVAQCYQMLRDSSWKIIDACQ 227
L PD LY DI + A ER + L+ +R A+ + +R +I+ Q
Sbjct: 123 ATDGLKPDLTLYFDIDTDVALERIMKNRADEVNRLDLER--AEMHSKVRQGYLEIVK--Q 178
Query: 228 SIE-----DVEKQLKEIVLDQVTACKK 249
E D ++L ++V D +T KK
Sbjct: 179 EPERFVTIDASQELDKVVADTLTVIKK 205
>gi|159040886|ref|YP_001540138.1| dTMP kinase [Caldivirga maquilingensis IC-167]
gi|254808282|sp|A8MB58.1|KTHY_CALMQ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|157919721|gb|ABW01148.1| dTMP kinase [Caldivirga maquilingensis IC-167]
Length = 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMIS-AYLSNQSHLDDH 115
V +EG+D GK++ L G+ V P + +G I + L + ++
Sbjct: 4 FVDVEGIDGVGKSTVIRLTADELRRRGYLVYTTSEPS-DSPIGLFIRRSILESNLEVEPM 62
Query: 116 TIHLLFSANR-WEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
+ LLF+A+R +++ K+K G +I +RY S VA+ ++G+ +EW +
Sbjct: 63 ALALLFAADRVIHYNRVIKPKVKEGYIVITERYIESSVAYQGSQGVPVEWIIEVNSMVAE 122
Query: 175 PDSVLYLDIPPEKAAERGGYGG--ERYE-HLEFQRKVAQCY-QMLRDSSWKIIDACQSIE 230
PD V+ L+ P A R G E +E + +F R V + Y + R+ ++ +IDA + I
Sbjct: 123 PDLVIVLNAPLNTVASRLSNRGMLEYFERNTDFLRSVQEVYLRRARERNYPVIDASRVIN 182
Query: 231 DVEKQLKEIVLDQVTACKKGK 251
+V + ++ D+ KGK
Sbjct: 183 NVVNDVLTLIEDK----AKGK 199
>gi|22537716|ref|NP_688567.1| thymidylate kinase [Streptococcus agalactiae 2603V/R]
gi|25011666|ref|NP_736061.1| thymidylate kinase [Streptococcus agalactiae NEM316]
gi|76787087|ref|YP_330195.1| thymidylate kinase [Streptococcus agalactiae A909]
gi|76799459|ref|ZP_00781603.1| thymidylate kinase [Streptococcus agalactiae 18RS21]
gi|77408332|ref|ZP_00785074.1| thymidylate kinase [Streptococcus agalactiae COH1]
gi|339301022|ref|ZP_08650146.1| thymidylate kinase [Streptococcus agalactiae ATCC 13813]
gi|406709959|ref|YP_006764685.1| thymidylate kinase [Streptococcus agalactiae GD201008-001]
gi|410594960|ref|YP_006951687.1| thymidylate kinase [Streptococcus agalactiae SA20-06]
gi|417005962|ref|ZP_11944532.1| thymidylate kinase [Streptococcus agalactiae FSL S3-026]
gi|421146520|ref|ZP_15606232.1| thymidylate kinase [Streptococcus agalactiae GB00112]
gi|421532750|ref|ZP_15979099.1| thymidylate kinase [Streptococcus agalactiae STIR-CD-17]
gi|424048978|ref|ZP_17786529.1| thymidylate kinase [Streptococcus agalactiae ZQ0910]
gi|46576569|sp|Q8DYB3.1|KTHY_STRA5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|46576575|sp|Q8E3X8.1|KTHY_STRA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|123601435|sp|Q3JZV8.1|KTHY_STRA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|22534605|gb|AAN00440.1|AE014263_19 thymidylate kinase [Streptococcus agalactiae 2603V/R]
gi|24413206|emb|CAD47285.1| unknown [Streptococcus agalactiae NEM316]
gi|76562144|gb|ABA44728.1| thymidylate kinase [Streptococcus agalactiae A909]
gi|76585186|gb|EAO61800.1| thymidylate kinase [Streptococcus agalactiae 18RS21]
gi|77173095|gb|EAO76222.1| thymidylate kinase [Streptococcus agalactiae COH1]
gi|319745548|gb|EFV97850.1| thymidylate kinase [Streptococcus agalactiae ATCC 13813]
gi|341576143|gb|EGS26554.1| thymidylate kinase [Streptococcus agalactiae FSL S3-026]
gi|389649538|gb|EIM71016.1| thymidylate kinase [Streptococcus agalactiae ZQ0910]
gi|401686873|gb|EJS82841.1| thymidylate kinase [Streptococcus agalactiae GB00112]
gi|403641978|gb|EJZ02879.1| thymidylate kinase [Streptococcus agalactiae STIR-CD-17]
gi|406650844|gb|AFS46245.1| thymidylate kinase [Streptococcus agalactiae GD201008-001]
gi|410518599|gb|AFV72743.1| Thymidylate kinase [Streptococcus agalactiae SA20-06]
Length = 211
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
+G ++ EG D GKT+ +L L E L + R P T + + I + + H
Sbjct: 3 KGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVT-ISEEIRHIILDVKHT 61
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFS-SAKGID---IE 163
+D T LL+ A R ++ ++E L A G +++DR+ S VA+ S +G+D I+
Sbjct: 62 QMDKKTELLLYMAAR--RQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIK 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W PD LY D+P E ER +R E L+ ++V Q Y L D
Sbjct: 120 WLNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQREVNRLDLEQLDMHQRVRQGYLELAD 179
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVT 245
S IDA Q +++V + I+LD++
Sbjct: 180 SEPNRIVTIDASQQLDEVIAETFSIILDRIN 210
>gi|340399362|ref|YP_004728387.1| thymidylate kinase [Streptococcus salivarius CCHSS3]
gi|387761817|ref|YP_006068794.1| thymidylate kinase [Streptococcus salivarius 57.I]
gi|338743355|emb|CCB93863.1| thymidylate kinase (dTMP kinase) [Streptococcus salivarius CCHSS3]
gi|339292584|gb|AEJ53931.1| thymidylate kinase [Streptococcus salivarius 57.I]
Length = 209
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYL-EGLGHSVELWRFPDRTTSVGQMISAYLS-NQS 110
S+G L+ +EG D GKT+ LL L E V R P Q+ L + +
Sbjct: 2 SKGLLISIEGPDGAGKTTVLEALLPRLREVYPAQVVTTREPGGVAIAEQIREVILDVDNT 61
Query: 111 HLDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFS-SAKGID---IE 163
+D T LL+ A R ++ ++E +L+ G +I+DR+ S VA+ + +G+D I
Sbjct: 62 AMDAKTELLLYIAAR--RQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGTGRGLDQDEIA 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W A PD L D+ E R GER E L+ ++V Q Y L
Sbjct: 120 WLNAYATDGYKPDVTLLFDVDSETGLARIAASGEREVNRLDLEKLDLHQRVRQGYLDLAQ 179
Query: 218 SS---WKIIDACQSIEDVEKQLKEIV 240
+ K+IDA Q+ EDV +Q E++
Sbjct: 180 AEPERIKLIDASQAFEDVVEQAWEVI 205
>gi|119025180|ref|YP_909025.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703]
gi|154486549|ref|ZP_02027956.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis
L2-32]
gi|166221721|sp|A0ZZR0.1|KTHY_BIFAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|118764764|dbj|BAF38943.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703]
gi|154084412|gb|EDN83457.1| dTMP kinase [Bifidobacterium adolescentis L2-32]
Length = 217
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
+G + EG+D GKT+Q RL +Y+E G + R P T++G I L +
Sbjct: 2 QGTFISFEGVDGVGKTTQVERLRAYVESQGRECVVTREPG-GTALGVAIRKMLLHGVDTG 60
Query: 114 DH---------TIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIE 163
D T LLF+A+R + + ++ L+ G +I DRY S +A+ A G ++
Sbjct: 61 DENDCADIAPRTEALLFAADRAQHVAEVILPALQRGAVVITDRYLDSSLAY-QAGGRELT 119
Query: 164 WCKAPEIGL-----LAPDSVLYLDIPPEKAAERGGYGGERYEHL--EFQRKVAQCYQMLR 216
+ + + L P+ LD+ P ++ R + +R E +FQR+ + L
Sbjct: 120 AAEIRNLSMWATNGLLPERTYLLDMDPAQSHARLQHAEDRMEAAGNDFQRRTRVAFLDLA 179
Query: 217 D---SSWKIIDACQSIEDVEKQLK 237
+ + +IDA QSIEDV ++K
Sbjct: 180 EREPERFHVIDASQSIEDVWARIK 203
>gi|323526017|ref|YP_004228170.1| thymidylate kinase [Burkholderia sp. CCGE1001]
gi|323383019|gb|ADX55110.1| thymidylate kinase [Burkholderia sp. CCGE1001]
Length = 206
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQCS----RLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ + RL + G SV + R P T +G+ I + +
Sbjct: 2 ARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRSVVMTREPG-GTPLGEQIREIVLH 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKA 167
Q + L+F+ R ++E L G ++ DR++ + A+ +G+ + +
Sbjct: 61 QKMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDKLET 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHLE---FQRKVAQCYQMLRDSS 219
E G PD + D+ PE A ER +R+E F+R A+ + ++
Sbjct: 121 LERWVQGGFQPDLTVLFDLAPEIANERRSAARDPDRFESESAAFFERTRAEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIVLD 242
++ IID+ QSI ++KQL+E++++
Sbjct: 181 YRFAIIDSSQSIARIQKQLEELIVN 205
>gi|340357132|ref|ZP_08679758.1| thymidylate kinase [Sporosarcina newyorkensis 2681]
gi|339618602|gb|EGQ23196.1| thymidylate kinase [Sporosarcina newyorkensis 2681]
Length = 213
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL-SNQSHL 112
RG + EG + GKT+ ++ + L+ G +V + R P ++ L +N +
Sbjct: 2 RGLFISFEGPEGAGKTTVLRKIAARLKEQGRAVTMTREPGGIPIAEKIREVILDANHQEM 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGIDIEWCKAP 168
D T LL++A R ++ ++E L A G+ ++ DR+ S +A+ A+G+ ++ A
Sbjct: 62 DGKTEALLYAAAR--RQHLVEKVLPALEEGSIVLCDRFIDSSLAYQGFARGLGMDDVLA- 118
Query: 169 EIGLLA-----PDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQML-- 215
I L A PD ++ D+PPE ER ER E LEF ++V + YQ +
Sbjct: 119 -INLFAIEDHMPDCTIFFDVPPEVGLERIWKDTEREQNRLDLEELEFHKRVYKGYQEVIT 177
Query: 216 -RDSSWKIIDACQSIEDVEKQLKEIVLDQVT 245
+ +++DA +S V + + EIV +V
Sbjct: 178 RAEGRIQVVDAQKSELQVVENVWEIVNSEVN 208
>gi|54297309|ref|YP_123678.1| thymidylate kinase [Legionella pneumophila str. Paris]
gi|59798140|sp|Q5X5G6.1|KTHY_LEGPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|53751094|emb|CAH12505.1| hypothetical protein lpp1354 [Legionella pneumophila str. Paris]
Length = 212
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH--- 111
G L+V+EGL+ GK++ + ++ L S R P T +G+++ + + N +
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-GTRIGEILRSIIKNPEYNNV 64
Query: 112 LDDHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
LDD + LL A R + +++ L G +I DR+ S +A+ G + E+
Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGG-GRKMNMRVINEL 123
Query: 171 GL-----LAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQML--RDSS 219
PD LYLDI PE +A RG + E +EF ++ Y +L ++
Sbjct: 124 SNFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHRIHDTYHVLVKQNPE 183
Query: 220 WKIIDACQSIEDVEKQLKEIV 240
+IDA +S+++V+ ++ ++
Sbjct: 184 IMMIDANRSLDEVQSSIQSVI 204
>gi|428202559|ref|YP_007081148.1| thymidylate kinase [Pleurocapsa sp. PCC 7327]
gi|427979991|gb|AFY77591.1| thymidylate kinase [Pleurocapsa sp. PCC 7327]
Length = 215
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD--- 113
+V EG+D G ++Q S L Y G + P +G++I L N++ L
Sbjct: 5 FIVFEGIDGSGTSTQASLLKDYFLSQGDRAIVSPEPS-NGPIGKLIREALQNKTILIQDS 63
Query: 114 ---DHTIHLLFSANR-WEKRSMMEAKLK----AGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
D + LF+A+R + + ++ K T +I RY +S +A++ D E+
Sbjct: 64 QKFDEQMAYLFAADRHYHLYNDIDGVFKLIRDENTHVITPRYYFSSLAYNCNNQQDFEFV 123
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAE--RGGYGGERYEHLEFQRKVAQCYQMLRDSSWKI- 222
+ PD V+YLD+P E A E R E YEH E KV YQ + ++ +
Sbjct: 124 RNLNQRFPNPDLVIYLDLPIEVALERIRARSFKEVYEHQEKLLKVRHNYQYIFENYHSLL 183
Query: 223 --IDACQSIEDVEKQLKEIVLDQVTACKK 249
+D +S E + K++ + + A K
Sbjct: 184 LKVDGTESKEGINKKIINFIEKETEASSK 212
>gi|344205412|ref|YP_004790554.1| thymidylate kinase [Mycoplasma putrefaciens KS1]
gi|343957335|gb|AEM69050.1| thymidylate kinase [Mycoplasma putrefaciens KS1]
Length = 213
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HLDDH 115
+ EG+D GKT+ + S LE +G+ V + R P Q+ L N + ++
Sbjct: 2 FITFEGIDGSGKTTALLDVKSELEKMGYKVLVTREPGGELIAEQIRKILLDNNNLTINPW 61
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGLL 173
T LLF A R E +++ LK +I DR+ S A+ SA+ I +E + +L
Sbjct: 62 TEALLFIAARKEHLEKVIKPALKNNIIVISDRFIDSTSAYQGSAREIGVENVDRIQNTVL 121
Query: 174 A---PDSVLYLDIPPEKAAERGGYGGERY------EHLEFQRKVAQCYQML---RDSSWK 221
PD L+ DI + A R G+ E +F++KV Q Y+ L K
Sbjct: 122 GDCIPDLTLFFDISFDLAEARINIRGKTTKNRLDKEKKDFKQKVYQGYKTLIKKNPDRIK 181
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTACKK 249
+IDA ++++ V KQ E +L+++ +K
Sbjct: 182 VIDASKTLDIVSKQALEFILEKIKENEK 209
>gi|319939588|ref|ZP_08013947.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV]
gi|319811177|gb|EFW07483.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV]
Length = 212
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 23/199 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G + LEG D GK+S L+ LE G + R P +V + I + + H
Sbjct: 2 SKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPG-GVAVAEKIRDVVLDPKHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGI---DIE 163
+D+ T LL+ A+R ++ ++E L A G ++VDR+ S VA+ +G+ DI+
Sbjct: 61 EIDEKTELLLYIASR--RQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY-QML 215
W L PD LY DI E K+ ERG +R E +E+ ++V + Y +L
Sbjct: 119 WLNDFATDGLKPDLTLYFDIEAEEGLARIAKSKERGADRLDR-ESVEWHQRVREGYLSIL 177
Query: 216 RDSSWKI--IDACQSIEDV 232
+ ++ IDA Q +E V
Sbjct: 178 KKEPNRVRKIDASQPLEKV 196
>gi|157146204|ref|YP_001453523.1| thymidylate kinase [Citrobacter koseri ATCC BAA-895]
gi|166221737|sp|A8AHX4.1|KTHY_CITK8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|157083409|gb|ABV13087.1| hypothetical protein CKO_01960 [Citrobacter koseri ATCC BAA-895]
Length = 213
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 58 VVLEGLDRCGKTSQCSRLLSYLEGLG-HSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V+EGL+ GKT+ + ++ LE LG H + R P T ++ S L +S + D T
Sbjct: 6 IVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKS-VGDET 64
Query: 117 IH-----LLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGID---IEWCK 166
I L+F A R + ++++ L GT +I DR+ S A+ +GID + +
Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RDSSW 220
+G PD LYLD+ PE +R GE E L+F + Y L D+S
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRTRARYLELAASDASI 184
Query: 221 KIIDACQSIEDVEKQLKEIV 240
+ IDA Q +E V ++ V
Sbjct: 185 RTIDATQPLEAVMNDIRTTV 204
>gi|335032101|ref|ZP_08525508.1| dTMP kinase [Streptococcus anginosus SK52 = DSM 20563]
gi|333767772|gb|EGL44995.1| dTMP kinase [Streptococcus anginosus SK52 = DSM 20563]
Length = 212
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G + LEG D GK+S L+ LE G + R P +V + I + + H
Sbjct: 2 SKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPG-GVAVAEKIRDVVLDPKHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGI---DIE 163
+D+ T LL+ A+R ++ ++E L A G ++VDR+ S VA+ +G+ DI+
Sbjct: 61 EIDEKTELLLYIASR--RQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCYQMLR 216
W L PD LY DI E K+ ERG +R E +E+ ++V + Y +
Sbjct: 119 WLNDFATDGLKPDLTLYFDIEAEEGLARIAKSKERGADRLDR-ESVEWHQRVREGYLSIL 177
Query: 217 D---SSWKIIDACQSIEDV 232
+ + K IDA Q +E V
Sbjct: 178 EKEPNRMKRIDASQPLEKV 196
>gi|282163168|ref|YP_003355553.1| probable thymidylate kinase [Methanocella paludicola SANAE]
gi|282155482|dbj|BAI60570.1| probable thymidylate kinase [Methanocella paludicola SANAE]
Length = 201
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTT-SVGQMISAYLSNQSHL 112
+G L+ +EG+D GKT+Q L +LE H VE + T GQ I+ S
Sbjct: 4 KGRLITIEGIDGTGKTTQVQLLKEWLER--HGVEAVALKEPTQGKYGQEIARRAHAGSFG 61
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK-APEIG 171
+ L R + + L++G ++I+DRY S +A+ A+G+D E + E
Sbjct: 62 PRDELRLFMEDRREDVEKNIRPALESGKSVIMDRYYLSNMAYQGARGLDPERIRLENEAF 121
Query: 172 LLAPDSVLYLDIPPEKAAERGGYGGERYEHLE---FQRKVAQCYQML-RDSSWKIIDACQ 227
PD ++ LD+ PEK+ R H E + KV + + + + + +I+
Sbjct: 122 SPVPDLIIILDLAPEKSMARVNTRKNVVGHFENEAYLEKVRKIFLAIGKQPNAVVINTEA 181
Query: 228 SIEDVEKQLKEIVLDQV 244
+ DV +++ + V D++
Sbjct: 182 PVADVHERIVDAVRDRL 198
>gi|315221919|ref|ZP_07863830.1| thymidylate kinase [Streptococcus anginosus F0211]
gi|315188885|gb|EFU22589.1| thymidylate kinase [Streptococcus anginosus F0211]
Length = 212
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
++G + LEG D GK+S L+ LE G + R P +V + I + + H
Sbjct: 2 AKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPG-GVAVAEKIRDVVLDPKHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMMEAKLKA---GTTLIVDRYSYSGVAFSS-AKGI---DIE 163
+D+ T LL+ A+R ++ ++E L A G ++VDR+ S VA+ +G+ DI+
Sbjct: 61 EIDEKTELLLYIASR--RQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPE-------KAAERGGYGGERYEHLEFQRKVAQCY-QML 215
W L PD LY DI E K+ ERG +R E +E+ R+V + Y +L
Sbjct: 119 WLNDFATDGLKPDLTLYFDIEAEEGLARIAKSKERGADRLDR-ESVEWHRRVREGYLSIL 177
Query: 216 RDSSWKI--IDACQSIEDV 232
++ IDA Q +E V
Sbjct: 178 EKEPNRVRKIDASQPLEKV 196
>gi|42560606|ref|NP_975057.1| thymidylate kinase [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|59798304|sp|Q6MUI5.1|KTHY_MYCMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|42492102|emb|CAE76699.1| THYMIDYLATE KINASE [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|301320609|gb|ADK69252.1| dTMP kinase [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 213
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH-LDDH 115
+ EG+D GKT+ ++ LE L + V + R P Q+ L N++ +D
Sbjct: 2 FITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDAW 61
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPEIGLL 173
T LLF A+R + + +++ L+ +I DR+ S A+ SA+ I ++ + +L
Sbjct: 62 TEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIVL 121
Query: 174 A---PDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLRDS--SWK 221
PD L+ D+ +A +R GE E +F++KV Q Y ++++++ K
Sbjct: 122 KNCLPDLTLFFDVSFSEAEKRMQIRGENSKNRLDEEKSDFKQKVYQGYLELVKNNPKRIK 181
Query: 222 IIDACQSIEDVEKQLKEIVLDQVTACKK 249
+IDA Q I+ V Q +I+L+++ +K
Sbjct: 182 VIDANQDIDQVYNQAIKIILEKLKENEK 209
>gi|15897682|ref|NP_342287.1| thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
gi|227830328|ref|YP_002832108.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
gi|229579145|ref|YP_002837543.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
gi|229582100|ref|YP_002840499.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
gi|284997753|ref|YP_003419520.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
gi|11133144|sp|Q9UXG7.1|KTHY1_SULSO RecName: Full=Probable thymidylate kinase 1; AltName: Full=dTMP
kinase 1
gi|6015696|emb|CAB57523.1| thymidylate kinase [Sulfolobus solfataricus P2]
gi|13813955|gb|AAK41077.1| Thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
gi|227456776|gb|ACP35463.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
gi|228009859|gb|ACP45621.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
gi|228012816|gb|ACP48577.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
gi|284445648|gb|ADB87150.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
Length = 189
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEG-LGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
L+ +EG+D GKT+ + L +LE + +V + R P + + ++I N D
Sbjct: 4 LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREP-FSEDIIKLIEKIGWN----DPI 58
Query: 116 TIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAP 175
+ LLF+A+R E +K+K +I+DRY +S +A+ A G+D +W K P
Sbjct: 59 LLVLLFAADR-EIHVNWLSKIKDADLIILDRYYFSSIAYQGALGVDEQWIKMVNSYFPKP 117
Query: 176 DSVLYLDIPPEKAAERGGYGGERYEH-LEFQRKVAQCY-QMLRDSSWKIIDACQSIEDVE 233
D V+ LD+P E A R +E ++ KV + Y ++ ++ ++ ++DA + +V
Sbjct: 118 DMVILLDLPIEVAISRIKNDKFNFEEKIKSLAKVREKYLKLAKEYNFYVVDASKDKNEVL 177
Query: 234 KQLKEIV 240
+Q +I+
Sbjct: 178 EQAIKII 184
>gi|147676397|ref|YP_001210612.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
gi|189030835|sp|A5D690.1|KTHY_PELTS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|146272494|dbj|BAF58243.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
Length = 216
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQ--SH 111
+G +V EG+D GKT+Q L LE +G V R P T VG+ I L N
Sbjct: 2 KGKFIVFEGVDGSGKTTQIKLLGEKLESMGCPVVYTREPG-GTRVGERIREILLNPLYGE 60
Query: 112 LDDHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA-- 167
L LL++A R + + ++ L+ G ++ DR++ S +A+ +G+DIE +
Sbjct: 61 LVPWAEALLYAAARAQHVAQVILPALREGKVVLCDRFTDSSLAYQGYGRGVDIEMLEQVN 120
Query: 168 -PEIGLLAPDSVLYLDIPPEKAAE---RGGYGGERYEH--LEFQRKVAQCYQMLRDSS-- 219
P + PD VL LD E E R G +R E EF R+V Y L +
Sbjct: 121 RPAAAGVVPDLVLVLDFDREGQTERMARSGRSADRIEREAQEFYRRVRSGYLALAARAPR 180
Query: 220 -WKIIDACQSIE----DVEKQLKEIV 240
+++IDA ++ + DV K +E++
Sbjct: 181 RYRVIDASRAEKLVHLDVLKAAEEVL 206
>gi|303251157|ref|ZP_07337341.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307251422|ref|ZP_07533336.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307253501|ref|ZP_07535371.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|302650008|gb|EFL80180.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306856506|gb|EFM88648.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306859002|gb|EFM91045.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 208
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQM--ISAYLSNQSH 111
RG +VLEGL+ GKT+ +L+ LE G SV R P T ++ + + + ++
Sbjct: 2 RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKSVVQTREPGGTPLAEKLRHLIKHETEEAV 61
Query: 112 LDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGID---IEWCKA 167
D + +L++A ++++ L G ++ DR+ S A+ + ID +E K
Sbjct: 62 SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGE--RYEH--LEFQRKVAQCYQMLRDSSWK-- 221
+G PD +YLDI P R GE R E L+F + Q Y L ++ K
Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGRGELDRIEQQSLDFFYRTRQRYLELTQNNEKAV 181
Query: 222 IIDACQSIEDVEKQLKEIV 240
II+A QSIE V +++ V
Sbjct: 182 IINAEQSIEQVAADIQQAV 200
>gi|456391871|gb|EMF57229.1| putative DNA polymerase III delta prime subunit [Streptomyces
bottropensis ATCC 25435]
Length = 1107
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 34 SCTPFRMESSSSLRIGNIDSR-----GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVEL 88
S P R + +L G+ ++ G + LEG D GK++Q L ++ GH V +
Sbjct: 483 SGVPLRQDLRDALLKGDDPAQAPAASGFFIALEGGDGAGKSTQVEALAEWVRAKGHEVVV 542
Query: 89 WRFPDRTTSVGQMISAYLSNQSH--LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVD 145
R P T VG+ + + L + S L LL++A+R E +++ L+ G +I D
Sbjct: 543 TREPG-ATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVISD 601
Query: 146 RYSYSGVAFSSAKGIDIEWCKAPEIGLLAPDSV-----LYLDIPPEKAAERGGYGGERYE 200
RY S VA+ A G D+ + I A D + + LD+ PE A ER +R E
Sbjct: 602 RYIDSSVAYQGA-GRDLSPTEIARISRWATDGLVPHLTVLLDVSPEAARERFTEAPDRLE 660
Query: 201 H--LEFQRKVAQCYQMLRDSS---WKIIDACQSIEDV 232
EF +V + L + + ++DA Q E V
Sbjct: 661 SEPAEFHERVRAGFLTLAAADAGRYLVVDAAQDPEAV 697
>gi|238027001|ref|YP_002911232.1| thymidylate kinase [Burkholderia glumae BGR1]
gi|237876195|gb|ACR28528.1| Thymidylate kinase [Burkholderia glumae BGR1]
Length = 206
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 53 SRGALVVLEGLDRCGKTSQ----CSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSN 108
+RG + EG+D GKT+ C L + + G V R P T +G+ + A L
Sbjct: 2 ARGKFITFEGIDGAGKTTHLAWFCEHLRAKIAPAGRQVVQTREPG-GTVLGEALRALLLE 60
Query: 109 QSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAF-SSAKGIDIEWCKA 167
Q + L+F+ R ++E L G ++ DR++ + A+ +G+ + +A
Sbjct: 61 QPMDLETEALLMFAGRREHLARVIEPALTRGDWVVSDRFTDATFAYQGGGRGLPRDKLEA 120
Query: 168 PE---IGLLAPDSVLYLDIPPEKAAERGG--YGGERYE---HLEFQRKVAQCYQMLRDSS 219
E G PD + D+PPE A+ER G +++E F R A+ + ++
Sbjct: 121 LERWVQGGFQPDLTVLFDVPPEVASERRGAVRAPDKFESESEAFFLRTRAEYLRRAEEAP 180
Query: 220 WK--IIDACQSIEDVEKQLKEIV 240
+ I+DA QSI +++QL+ ++
Sbjct: 181 HRFLIVDATQSIPQIQRQLEGVL 203
>gi|332288583|ref|YP_004419435.1| thymidylate kinase [Gallibacterium anatis UMN179]
gi|330431479|gb|AEC16538.1| thymidylate kinase [Gallibacterium anatis UMN179]
Length = 210
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLG-HSVELWRFPDRT---TSVGQMISAYLSNQSHL 112
+VLEGL+ GKTS +++ L+ LG + R P T + Q+I ++
Sbjct: 5 FIVLEGLEGAGKTSARDTVVAVLKELGINEFVFTREPGGTPLAEKLRQLIKQGEGDEVIT 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEW---CKAP 168
D + +L++A ++++ LK G +I DR+ S A+ +G+DI K
Sbjct: 65 DKAELLMLYAARVQLVENVIKPALKQGKWVIGDRHDLSSQAYQGGGRGLDINLLMTLKQA 124
Query: 169 EIGLLAPDSVLYLDIPPE----KAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWK--I 222
+G PD LYLD+ PE +A RG + ++F ++ Q Y L ++ K
Sbjct: 125 VLGDFTPDLTLYLDVDPEIGLARARSRGELDRIEQQQIDFFQRTRQRYLQLVEADEKSVT 184
Query: 223 IDACQSIEDVEKQLKEIV 240
IDA +V KQL++ +
Sbjct: 185 IDANLDFPEVNKQLRQAI 202
>gi|401763213|ref|YP_006578220.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174747|gb|AFP69596.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 213
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELW-RFPDRTTSVGQMISAYLSNQSHL 112
R +V+EGL+ GKT+ ++ L LG + ++ R P T ++ S L +S
Sbjct: 2 RSKYIVIEGLEGAGKTTARDVVVETLNALGVTDMVFTREPGGTQLAEKLRSLVLDIKSVG 61
Query: 113 D----DHTIHLLFSANRWE-KRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
D D L+F A R + ++++ L G +I DR+ S A+ +GID +
Sbjct: 62 DEVITDKAEVLMFYAARVQLVETVIKPALADGKWVIGDRHDLSTQAYQGGGRGIDQTMLA 121
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGE----RYEHLEFQRKVAQCYQML--RD 217
+ +G PD LYLD+ PE +R GE E +F + Y L +D
Sbjct: 122 TLRNAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQD 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIV 240
SS + IDA QS+EDV + +++ V
Sbjct: 182 SSIRTIDATQSLEDVTQDIQQTV 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,974,330,693
Number of Sequences: 23463169
Number of extensions: 155590623
Number of successful extensions: 391576
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 3214
Number of HSP's that attempted gapping in prelim test: 386664
Number of HSP's gapped (non-prelim): 3994
length of query: 259
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 120
effective length of database: 9,097,814,876
effective search space: 1091737785120
effective search space used: 1091737785120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)