BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025041
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P23919|KTHY_HUMAN Thymidylate kinase OS=Homo sapiens GN=DTYMK PE=1 SV=4
Length = 212
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GK++Q +L+ L GH EL RFP+R+T +G+++S+YL +S ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++ KL G TL+VDRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSS--WKIIDACQSI 229
PD VL+L + AA+RG +G ERYE+ FQ + +C+ Q+++D++ WK++DA +SI
Sbjct: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E V + ++ + D + + KP LW
Sbjct: 185 EAVHEDIRVLSEDAIRTATE-KPLGELW 211
>sp|Q54GN2|KTHY_DICDI Thymidylate kinase OS=Dictyostelium discoideum GN=dtymk PE=3 SV=1
Length = 222
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 129/188 (68%), Gaps = 2/188 (1%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGH-SVELWRFPDRTTSVGQMISAYLSNQSHL 112
RG ++ EG+DR GK++Q L +++ + + RFPDRTT +GQ+I+ YL N +++
Sbjct: 18 RGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYLQNATNM 77
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
DD +HLLFS+NRWE R + L GT ++VDRYSYSGVA+S+AKGID +WC A E GL
Sbjct: 78 DDRALHLLFSSNRWEARDSILELLNNGTNIVVDRYSYSGVAYSAAKGIDFDWCYACEKGL 137
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSIED 231
PD + YL + E A +RG YGGERYE LEFQ+K+ Q Y + L D WKII+A +SI++
Sbjct: 138 PKPDLIFYLSMSSEDATKRGEYGGERYEKLEFQKKIKQIYEEKLVDDQWKIINANRSIDE 197
Query: 232 VEKQLKEI 239
+ ++ I
Sbjct: 198 ISNEISSI 205
>sp|P97930|KTHY_MOUSE Thymidylate kinase OS=Mus musculus GN=Dtymk PE=2 SV=2
Length = 212
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 147/208 (70%), Gaps = 5/208 (2%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RGAL+VLEG+DR GKT+Q +L++ L GH EL RFP+R+T +G+++++YL ++ L+
Sbjct: 5 RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTELE 64
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK-GIDIEWCKAPEIGL 172
DH++HLLFSANRWE+ +++AKL G TL++DRY++SGVAF+ AK ++WCK P++GL
Sbjct: 65 DHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD +L+L + AA RG +G ERYE FQ++V C+Q L ++ +WK++DA +SI
Sbjct: 125 PKPDLILFLQLQLLDAAARGEFGLERYETGTFQKQVLLCFQQLMEEKNLNWKVVDASKSI 184
Query: 230 EDVEKQLKEIVLDQVTACKKGKPFSLLW 257
E+V K+++ D + + +P LW
Sbjct: 185 EEVHKEIRAHSEDAIRNAAQ-RPLGELW 211
>sp|P36590|KTHY_SCHPO Thymidylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=tmp1 PE=2 SV=2
Length = 210
Score = 191 bits (484), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 6/194 (3%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+RG L+V+EGLDR GK++QC L+ L EL++FPDRTT++G+ I YL L
Sbjct: 5 NRGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKESVQL 64
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+D IHLLFSANRWE + ++ G T I+DRY++SG+AFS+AKG+D EWCK+P+ GL
Sbjct: 65 NDQVIHLLFSANRWETIQYIYEQINKGVTCILDRYAFSGIAFSAAKGLDWEWCKSPDRGL 124
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKII--DAC 226
PD V++L++ P AA RG YG ERYE +E Q KV + +Q L R+ + I DA
Sbjct: 125 PRPDLVIFLNVDPRIAATRGQYGEERYEKIEMQEKVLKNFQRLQKEFREEGLEFITLDAS 184
Query: 227 QSIEDVEKQLKEIV 240
S+EDV Q+ ++V
Sbjct: 185 SSLEDVHSQIVDLV 198
>sp|Q91FS1|KTHY_IIV6 Putative thymidylate kinase 251L OS=Invertebrate iridescent virus 6
GN=IIV6-251L PE=3 SV=1
Length = 213
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 51 IDSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS 110
+++RG L+V EG D+ GK++QC L L+ V + FP+RTT G++I YL +
Sbjct: 10 LETRGLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLKGKI 69
Query: 111 HLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+L D IH+LFS NRWE ++ + G T+I+DRYSYSG+AFS AKG+D +WCK E
Sbjct: 70 YLSDEDIHILFSKNRWEIIDTIKTNILNGITVIIDRYSYSGIAFSVAKGLDFQWCKQTEN 129
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQ-MLRDSSWKIIDACQSI 229
GLL PD ++YL + A R GYG E YE +E Q KV +CY+ M+ W I+A Q +
Sbjct: 130 GLLKPDIIIYLTGQTKNMASRNGYGSEIYERIEIQDKVKKCYEKMIEIPLWNKINADQDV 189
Query: 230 EDVEKQLKEIV 240
++KQ++ I+
Sbjct: 190 LIIKKQIETII 200
>sp|Q22018|KTHY_CAEEL Probable thymidylate kinase OS=Caenorhabditis elegans GN=R53.2 PE=3
SV=1
Length = 218
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLE---------GLGHSVELWRFPDRTTSVGQMISA 104
RG L+V EGLDR GK++Q RL+ + S L FPDR++S+G++I
Sbjct: 7 RGLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSIGKLIDQ 66
Query: 105 YLSNQSHLDDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEW 164
YL + +D+H +HLLFSA+R+ K M+ + G +I DRY YSGVA+S AKG+ +W
Sbjct: 67 YLRKEIDMDEHALHLLFSADRFSKNQMIRDNIAKGIDVICDRYCYSGVAYSLAKGLPEQW 126
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSS-WKII 223
++ ++GL PD+VL+ D+ PE AA+RGG+G ER E Q+KVA LRD + WK +
Sbjct: 127 VRSSDVGLPKPDAVLFFDVSPEVAAQRGGFGEERLETATIQQKVAAVMPTLRDDAYWKTV 186
Query: 224 DACQSIEDVEKQLKEIVLDQVTACKKGKPFSLL 256
+A ++ VEK + I + + KPF L
Sbjct: 187 NADGDLDSVEKNVFRIYEN----LDREKPFESL 215
>sp|P00572|KTHY_YEAST Thymidylate kinase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=CDC8 PE=1 SV=2
Length = 216
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
RG L+++EGLDR GKT+QC+ L L+ + +L +FP+R+T +G +I+ YL++ S L
Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSFQL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAK---GIDIEWCKAPE 169
D IHLLFSANRWE ++ L G +++DRY YSGVA+S+AK G+D++WC P+
Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120
Query: 170 IGLLAPDSVLYLDIPP-EKAAERGGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
+GLL PD L+L + AE+ G+G ERYE ++FQ KV Q + L D + D +
Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180
Query: 229 IEDV-EKQLKEI 239
I DV K ++E+
Sbjct: 181 IVDVTNKGIQEV 192
>sp|Q8QQ21|KTHY_CAMPS Thymidylate kinase OS=Camelpox virus (strain CMS) GN=TMK PE=3 SV=1
Length = 204
Score = 154 bits (389), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 131/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + L ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESI--LANTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYEFGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ ++ + G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLESGSKEINKN--VGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q8V2K9|KTHY_CAMPM Thymidylate kinase OS=Camelpox virus (strain M-96) GN=TMK PE=3 SV=2
Length = 204
Score = 154 bits (389), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 131/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + L ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESI--LANTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYEFGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ ++ + G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLESGSKEINKN--VGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q80DS7|KTHY_CWPXG Thymidylate kinase OS=Cowpox virus (strain GRI-90 / Grishak) GN=TMK
PE=3 SV=2
Length = 204
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q8JL72|KTHY_ECTVM Thymidylate kinase OS=Ectromelia virus (strain Moscow) GN=TMK PE=3
SV=2
Length = 204
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE +EFQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVEFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAMHTVT--GPVGQLW 203
>sp|Q80HT9|KTHY_VACCW Thymidylate kinase OS=Vaccinia virus (strain Western Reserve)
GN=TMK PE=3 SV=2
Length = 204
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q77TG7|KTHY_VACCT Thymidylate kinase OS=Vaccinia virus (strain Tian Tan) GN=TMK PE=3
SV=1
Length = 204
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|P68693|KTHY_VACCC Thymidylate kinase OS=Vaccinia virus (strain Copenhagen) GN=TMK
PE=1 SV=1
Length = 204
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q76RA8|KTHY_VACCA Thymidylate kinase OS=Vaccinia virus (strain Ankara) GN=TMK PE=3
SV=1
Length = 204
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|P33803|KTHY_VAR67 Thymidylate kinase OS=Variola virus (isolate Human/India/Ind3/1967)
GN=TMK PE=3 SV=1
Length = 205
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPT--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML----RDSSWKIIDACQS 228
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGEDIHWQII-SSEF 176
Query: 229 IEDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EEDVKKELIKNIVIEAIHTVT--GPVGQLW 204
>sp|Q6RZD4|KTHY_RABPU Thymidylate kinase OS=Rabbitpox virus (strain Utrecht) GN=TMK PE=3
SV=1
Length = 204
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q8QMQ7|KTHY_CWPXB Thymidylate kinase OS=Cowpox virus (strain Brighton Red) GN=TMK
PE=3 SV=2
Length = 204
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
SRGAL+V EGLD+ GKT+QC ++ + ++++ FP R+T G+MI YL+ +
Sbjct: 2 SRGALIVFEGLDKSGKTTQCMNIMESIPS--NTIKYLNFPQRSTVTGKMIDDYLTRKKTY 59
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGL 172
+DH ++LLF ANRWE S ++ +L+ G TLIVDRY++SGVA+++AKG + K+ E GL
Sbjct: 60 NDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGL 119
Query: 173 LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML---RDSSWKIIDACQSI 229
PD V++L+ K R G E YE + FQ+KV Q Y+ + D W+II + +
Sbjct: 120 PKPDLVIFLE-SGSKEINR-NVGEEIYEDVAFQQKVLQEYKKMIEEGDIHWQII-SSEFE 176
Query: 230 EDVEKQL-KEIVLDQVTACKKGKPFSLLW 257
EDV+K+L K IV++ + P LW
Sbjct: 177 EDVKKELIKNIVIEAIHTVT--GPVGQLW 203
>sp|Q8U071|KTHY_PYRFU Probable thymidylate kinase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=tmk PE=3 SV=1
Length = 210
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 16/196 (8%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +VLEG+D GKT+Q L + E G V L + P T G++I + S +D
Sbjct: 3 RGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPT-DTEFGKIIRKLVLEGSIID 61
Query: 114 DHTIHL-----LFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I L LF+A+R E + ++E L+ G +I DRY YS +A+ A+G+++EW
Sbjct: 62 GGRISLEAEALLFAADRAEHVKKIIEPALREGKVVISDRYFYSSLAYQWARGLNLEWL-- 119
Query: 168 PEIGLLA--PDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSW 220
EI A PD + LDIPP + +R + E + Q KV + Y L
Sbjct: 120 IEINKFAPHPDIAILLDIPPREGIKRIKKRSSQTEFDKLFKLQEKVRENYIKLAKMFDEI 179
Query: 221 KIIDACQSIEDVEKQL 236
KIIDA +S+E+V +++
Sbjct: 180 KIIDATKSVEEVHREI 195
>sp|O59366|KTHY_PYRHO Probable thymidylate kinase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=tmk PE=3 SV=1
Length = 205
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 12/198 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG +VLEG+D GKT+Q L + E G+ V L + P + +G++I + +S +D
Sbjct: 2 RGYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPT-DSELGKLIRRIILEESVID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E + ++ L G +I DRY YS +A+ A+G+D+ W
Sbjct: 61 GSKISYEAEALLFAADRAEHVKKIILPALSEGKVVICDRYFYSSLAYQWARGLDLNWLIQ 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSWKI 222
PD + LD+P +++ R G E +E QRKV Y L + +I
Sbjct: 121 VNSFAPRPDLAILLDLPVKESLRRIKLRGTLTEFDKIVELQRKVRHNYLKLAEMFPEMRI 180
Query: 223 IDACQSIEDVEKQLKEIV 240
++A SIED+ + +V
Sbjct: 181 VNALSSIEDIHSDIVALV 198
>sp|Q9V1E9|KTHY_PYRAB Probable thymidylate kinase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=tmk PE=3 SV=1
Length = 205
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG VVLEG+D GKT+Q L + E G V L + P T G++I + S +D
Sbjct: 2 RGYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPT-DTEFGRLIRELVLKNSIID 60
Query: 114 DHTIH-----LLFSANRWE--KRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK 166
I LLF+A+R E K+ ++ A L+ G +I DRY YS +A+ A+G+ +EW
Sbjct: 61 GSRISYEAEALLFAADRAEHVKKVILPA-LEKGKVVICDRYLYSSLAYQWARGLSLEWLM 119
Query: 167 APEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSWK 221
PD + LD+P +++ R G E LE QRKV Y L + +
Sbjct: 120 QINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKLLELQRKVRMNYLKLAEMFKEMR 179
Query: 222 IIDACQSIEDVEKQLKEIV 240
I++A S+E+V + + +V
Sbjct: 180 IVNAMASVEEVHEDIVALV 198
>sp|C6A0S1|KTHY_THESM Probable thymidylate kinase OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=tmk PE=3 SV=1
Length = 210
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G +VLEG+D GK++Q L + E G+ V L + P T+ G++I + +
Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPT-DTAFGKLIRRLVLIGGKEGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E + ++E +KAG +I DRY YS +A+ A+G+D+ W
Sbjct: 61 IDGARISKEAEALLFAADRAEHVKKLIEPSIKAGKVVISDRYFYSSLAYQWARGLDLNWL 120
Query: 166 KAPEIGLLAP--DSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--S 218
+ AP D V+ LD+P +++ R R E +E Q+KV + Y L + +
Sbjct: 121 --INLNAFAPRADLVILLDLPVKESINRINGRSIRSEFDKIVELQKKVRKNYLKLAEKFN 178
Query: 219 SWKIIDACQSIEDVEKQLKEIV 240
+II+A +ED+ + ++
Sbjct: 179 EIRIINALAPVEDIHNDITALI 200
>sp|A3DM71|KTHY_STAMF Probable thymidylate kinase OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=tmk PE=3 SV=1
Length = 199
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
++ G +VLEG+D GKTS +L +L G +V P T V + Y +
Sbjct: 3 ENNGFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYVEALKKKY---NEY 59
Query: 112 LDDHTIHLLFSANRW-EKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
D + L ++A+R R+ + L+ G +I DRY YS A+ SA+G IEW
Sbjct: 60 RDAYLDALTYAADRLVHIRTEILPYLRRGYIVICDRYYYSSAAYQSAQGAPIEWVLEINK 119
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGER---YEHLEFQRKVAQCYQMLRDSSWKI-IDAC 226
L PD +YLD+ P +R R YE L+F +V + Y L D + + +DA
Sbjct: 120 YALKPDLTIYLDVDPAIGVKRRKGLNTRFPEYEKLDFLYRVRENYLWLVDKGYMVLVDAN 179
Query: 227 QSIEDVEKQLKEIVLDQVT 245
+ + V + +++IVL+ +
Sbjct: 180 REFDKVYRDVEKIVLEHLV 198
>sp|Q5JH21|KTHY_PYRKO Probable thymidylate kinase OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=tmk PE=3 SV=1
Length = 205
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSHLD 113
+VLEG+D GK++Q L + E G+ V L + P T G++I + + +D
Sbjct: 2 FIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPT-DTPFGKLIRRLVLTGGKEGIID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E +++ L+AG +I DRY YS +A+ A+G+D+EW
Sbjct: 61 GAKISHEAEALLFAADRAEHVDKLIKPSLEAGKVVISDRYFYSSLAYQWARGLDLEWLID 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAER---GGYGGERYEHLEFQRKVAQCYQMLRD--SSWKI 222
+ PD V LD+P +++ R E + E QRKV + Y L + KI
Sbjct: 121 LNRFAVKPDIVFLLDLPVKESMNRIRSRKVKSEFDKIFELQRKVRENYLKLAEMFPEMKI 180
Query: 223 IDACQSIEDVEKQL 236
I+A + +E V Q+
Sbjct: 181 INAMEDVETVHNQI 194
>sp|Q57741|KTHY_METJA Probable thymidylate kinase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=tmk PE=3 SV=1
Length = 188
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
+V EG+D GKT+Q L ++ W + + VG++I LS ++ +D+
Sbjct: 4 NMFIVFEGIDGSGKTTQSKLLAKKMDAF------WTYEPSNSLVGKIIREILSGKTEVDN 57
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R E +++ +LK ++ DRY YS +A+ S G+D + K+ L
Sbjct: 58 KTLALLFAADRIEHTKLIKEELKK-RDVVCDRYLYSSIAYQSVAGVDENFIKSINRYALK 116
Query: 175 PDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDAC-QSIEDV 232
PD V L + E A +R + +E +F +KV Y ++ + ++ +ID +S+E+V
Sbjct: 117 PDIVFLLIVDIETALKRVK-TKDIFEKKDFLKKVQDKYLELAEEYNFIVIDTTKKSVEEV 175
Query: 233 EKQL 236
++
Sbjct: 176 HNEI 179
>sp|O30175|KTHY_ARCFU Probable thymidylate kinase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=tmk PE=3 SV=1
Length = 196
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ +EG+D GKT+ + + L+ G+ V++ + P + G+ I + S + +
Sbjct: 2 LIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPG-DSKFGKKIKS--SEERLSPEEE 58
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCK------APEI 170
+ L + R + L++G +++DRY +S +A+ SA+GID + AP+
Sbjct: 59 LELFLKDREIDARENILPALQSGYAVVMDRYYFSNIAYQSARGIDARLIREMNEKIAPK- 117
Query: 171 GLLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQMLRDSSWKIIDACQS 228
PD + LD+ PE A ER G+ +E L++ RKV +C+ D + ++DA +
Sbjct: 118 ----PDLTILLDVEPEIALERVRKRGKLSPFEKLDYLRKVRKCFLENADETTVVVDASKP 173
Query: 229 IEDVEKQLKEIV 240
+E+V++++++++
Sbjct: 174 LEEVKEEVRKVI 185
>sp|O67099|KTHY_AQUAE Thymidylate kinase OS=Aquifex aeolicus (strain VF5) GN=tmk PE=1
SV=1
Length = 195
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
L+ EG+D GKT+Q +L YL+ G+ V L+R P T VG+++ L + LD+ T
Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPG-GTKVGEVLREILLTE-ELDERT 59
Query: 117 IHLLFSANRWEKRSMMEAK----LKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKA-PEI 170
LLF A+R ++E K LK +I+DR+ S +A+ KG+D+E+ K E
Sbjct: 60 ELLLFEASRS---KLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEF 116
Query: 171 GL--LAPDSVLYLDIPPEKAAERGGYGGERYEHLEFQRKVAQCYQML--RDSSWKIIDAC 226
+ PD L LDIP + A R R+E+ EF KV + + L + + +IDA
Sbjct: 117 ATRGVKPDITLLLDIPVDIALRRLKEKN-RFENKEFLEKVRKGFLELAKEEENVVVIDAS 175
Query: 227 QSIEDVEKQL 236
E+V K++
Sbjct: 176 GEEEEVFKEI 185
>sp|C5A1K2|KTHY_THEGJ Probable thymidylate kinase OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=tmk PE=3 SV=1
Length = 208
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSH 111
G VV+EG+D GK++Q L + E G+ V L + P T+ G++I + +
Sbjct: 2 GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPT-DTAFGKLIRKLVLTGGREGI 60
Query: 112 LDDHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWC 165
+D I LLF+A+R E +++ L++G +I DRY YS +A+ A+G+D++W
Sbjct: 61 IDGARISHEAEALLFAADRAEHVHKLIKPALESGKVVISDRYFYSSLAYQWARGLDLQWL 120
Query: 166 KAPEIGLLAPDSVLYLDIPPEKAAERGGYGGERYEH---LEFQRKVAQCYQMLRD--SSW 220
+ PD V+ LD+P +++ R + E +E Q++V + Y L +
Sbjct: 121 IDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKIVELQKRVRENYLKLAEMFPEI 180
Query: 221 KIIDACQSIEDVEKQLKEIVLDQV 244
+I++A SIED+ + + +V ++
Sbjct: 181 RIVNAQNSIEDIHRDIVGLVEQEI 204
>sp|B6YSZ4|KTHY_THEON Probable thymidylate kinase OS=Thermococcus onnurineus (strain NA1)
GN=tmk PE=3 SV=1
Length = 205
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL---SNQSHLD 113
+V+EG+D GK++Q L + + G+ V L + P T+ G++I + + +D
Sbjct: 2 FIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPT-DTAFGKLIRRLVLTGGKEGIID 60
Query: 114 DHTIH-----LLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKA 167
I LLF+A+R E +++ LK G +I DRY YS +A+ A+G+D+EW
Sbjct: 61 GARISHEAEALLFAADRAEHVHKLIKPSLKTGKIVISDRYFYSSLAYQWARGLDLEWLID 120
Query: 168 PEIGLLAPDSVLYLDIPPEKAAER--GGYGGERYEHL-EFQRKVAQCYQML--RDSSWKI 222
+ PD V+ LD+P +++ +R G ++ + E Q+KV + Y L R +I
Sbjct: 121 LNRFAVRPDLVILLDLPVKESMKRINGRSIKTEFDKIAELQKKVRENYLKLAERFPEMRI 180
Query: 223 IDACQSIEDVEKQLKEIV 240
++A S+ED+ + +V
Sbjct: 181 VNALASVEDIHNDIVALV 198
>sp|Q8ZY35|KTHY_PYRAE Probable thymidylate kinase OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tmk
PE=3 SV=1
Length = 192
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 56 ALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDH 115
A V +EG+D GK++ ++S LE V R P + +G++I + +D H
Sbjct: 2 AFVAIEGIDGSGKST----VISLLEKKLPRVYATREPS-SGPIGRLIKEWALKGGSVDPH 56
Query: 116 TIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
LLF+A+R E + +E +++ G +I +RY S +A+ A G+ E+ K +
Sbjct: 57 VDALLFAADRIEHYKREIEPRVREGYIVISERYIESSIAYQGAAGVSREFVKYINSLVPK 116
Query: 175 PDSVLYLDIPPEKAA----ERGGYGGERYEHLEFQRKVAQCY-QMLRDSSWKIIDACQSI 229
PD + LD+ P A +RG G E+YE+L F RKV + Y + + +IDA +
Sbjct: 117 PDLTIILDVDPSIAEARIRQRG--GAEKYEYLSFLRKVREIYLARAAEEGYPVIDASRRP 174
Query: 230 EDVEKQLKEIV 240
E+V + E++
Sbjct: 175 EEVAADVAELI 185
>sp|Q8THS9|KTHY_METAC Probable thymidylate kinase OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tmk PE=3
SV=1
Length = 206
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ +L E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAI--QSDTD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L+ G T+I DRYS Y G+ + +EW +
Sbjct: 60 QLAELFLFTADHAEHLAKLVKPALEDGKTVISDRYSDSRYAYQGITLKNRLDNPLEWVRD 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQML---RDSSWK 221
G + PD DI PE A +R G GE ++E +EF R V + + L +
Sbjct: 120 LHRGWTVIPDLTFLFDIEPEIAVKRCGKRGEQTKFEKIEFLRGVRELFLGLAAEEPERFV 179
Query: 222 IIDACQSIEDVEKQLKEIVLDQV 244
I+DA S EDVEK + + +LD V
Sbjct: 180 IVDASGSPEDVEKAVVQKILDFV 202
>sp|Q8PXV5|KTHY_METMA Probable thymidylate kinase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=tmk PE=3 SV=1
Length = 206
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ ++ E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAI--QSETD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L G +I DRYS Y GV S +EW ++
Sbjct: 60 QLAELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSRFENPLEWVRS 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQMLRDSS---WK 221
G + PD DI PE A ER G GE ++E +EF + V + + +L +
Sbjct: 120 LHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQTKFEKIEFLQNVRENFLILAAEDPGRFV 179
Query: 222 IIDACQSIEDVEKQLKEIVLD 242
+IDA + E+VEK++ + VL+
Sbjct: 180 VIDASRPQEEVEKKVIKKVLE 200
>sp|P0C8G1|KTHY_ASFP4 Thymidylate kinase OS=African swine fever virus (isolate Tick/South
Africa/Pretoriuskop Pr4/1996) GN=TMK PE=3 SV=1
Length = 239
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++R GK++Q RL LE + ++ RFP+ T+ G +I L+ +
Sbjct: 2 RGILIAIEGVNRVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ + E + + A LK +IVDRY +SG+A++ A GI IE +
Sbjct: 62 SEQLHKLFTKHCSEFVAEIAALLKLNFIVIVDRYIWSGLAYAQADGITIETK-----NIF 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>sp|Q47DZ5|KTHY_DECAR Thymidylate kinase OS=Dechloromonas aromatica (strain RCB) GN=tmk
PE=3 SV=1
Length = 204
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQS-HL 112
+G + EG+D GK+S L L G V + R P T +G+ + L N+ HL
Sbjct: 2 KGKFITFEGIDGAGKSSHVEWLAGLLRQRGIVVHVTREPG-GTELGEKLRELLLNEPMHL 60
Query: 113 DDHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFS-SAKGIDIEWCKAPE-- 169
+ T+ L+F+A R ++E L G ++ DR+S + A+ +G+D A E
Sbjct: 61 ETETL-LMFAARREHLARLIEPALARGEWVVCDRFSDATYAYQGGGRGLDRAKFLALEHW 119
Query: 170 -IGLLAPDSVLYLDIPPEKAAERGGYGGE-----RYEHLEFQRKVAQCY---QMLRDSSW 220
G L PD L D+P + A ER E ++F +V Q Y S
Sbjct: 120 VHGHLQPDLTLLFDLPLDVARERIVLANRVLDKFEQERVDFHERVRQAYLERAHTSPSRI 179
Query: 221 KIIDACQSIEDVEKQLKEIV 240
++IDA QSIE++ KQL++IV
Sbjct: 180 RVIDANQSIENIRKQLEQIV 199
>sp|A1W6N2|KTHY_ACISJ Thymidylate kinase OS=Acidovorax sp. (strain JS42) GN=tmk PE=3 SV=1
Length = 217
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHL 112
+ GA + EG+D GK+S L L GH+V L R P T ++ L + +
Sbjct: 2 TNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVALTREPGGTPLAEKLREMLLHDS--M 59
Query: 113 DDHTIHLL-FSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGIDIEWCKAPE- 169
D T LL F+A R R ++E L G ++ DR++ + A+ A +G D+E E
Sbjct: 60 DALTEALLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYMER 119
Query: 170 -----IGLLA-----PDSVLYLDIPPEKAAER--GGYGGERYEH--LEFQRKVAQCYQML 215
+GL PD L+ D+PPE AA+R +R+E +EF +VA+ Y
Sbjct: 120 LAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSAARAPDRFESQPVEFFTRVARGYADR 179
Query: 216 RDSS---WKIIDACQSIEDVEKQLKEIV 240
+ + ID+ Q E V QL+ +V
Sbjct: 180 AAGAPQRFARIDSSQPREQVAAQLRAVV 207
>sp|P42490|KTHY_ASFB7 Thymidylate kinase OS=African swine fever virus (strain Badajoz
1971 Vero-adapted) GN=TMK PE=3 SV=1
Length = 240
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++ GK++Q RL LE + ++ RFP+ T+ G +I L+ + +
Sbjct: 2 RGILITIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGGLILQVLNKMTEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ + E + + A LK +IVD Y +SG+A++ A GI IE +
Sbjct: 62 SEQLHKLFTKHHSEFSAEIAALLKLNFIVIVDHYIWSGLAYAQADGITIETK-----NIF 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>sp|A8AYF8|KTHY_STRGC Thymidylate kinase OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=tmk PE=3 SV=1
Length = 212
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYL--SNQSH 111
RG LV LEG D GK+S L+ LE GH V R P + + I + N +
Sbjct: 3 RGLLVSLEGPDGAGKSSVLEALVPILEAQGHQVVTTREPG-GVPISEAIREVILDQNNTE 61
Query: 112 LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGI---DIEW 164
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+ DIEW
Sbjct: 62 MDGKTELLLYIASR--RQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEW 119
Query: 165 CKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQ--CYQMLR 216
L PD LY D+ E+ R R E LE ++V Q Y + +
Sbjct: 120 LNQYATDGLKPDLTLYFDLDVEEGLARIAKNKNREVNRLDLEGLEMHQRVRQGYLYSLEK 179
Query: 217 DSSWKI-IDACQSIEDVEK 234
D + IDA Q++EDV K
Sbjct: 180 DPERLVKIDASQALEDVVK 198
>sp|Q5SHX3|KTHY_THET8 Thymidylate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634
/ DSM 579) GN=tmk PE=3 SV=1
Length = 198
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GKT+Q RL ++LE G V L R P + ++ S L+ + L
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPG--GGLPEVRSLLLTQE--LSP 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LLFSA+R E R ++ L AG +I DRY S +A+ +G+ + W + E+
Sbjct: 59 EAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLR--EVAR 116
Query: 173 -----LAPDSVLYLDIPPEKAAERGGYGGERYE--HLEFQRKVAQCYQML---RDSSWKI 222
L P LD+PPE AA R +R E LEF R+V + Y L + +
Sbjct: 117 EATRGLKPRLTFLLDLPPE-AALRRVRRPDRLEGLGLEFFRRVREGYLALARAEPGRFVV 175
Query: 223 IDACQSIEDVEKQLK 237
+DA E++ + ++
Sbjct: 176 LDATLPEEEIARAIQ 190
>sp|Q72I89|KTHY_THET2 Thymidylate kinase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=tmk PE=3 SV=1
Length = 198
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
G + LEGLD GKT+Q RL ++LE G V L R P + ++ S L+ + L
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPG--GGLPEVRSLLLTQE--LSP 58
Query: 115 HTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEWCKAPEIGL 172
+LLFSA+R E R ++ L AG +I DRY S +A+ +G+ + W + E+
Sbjct: 59 EAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLR--EVAR 116
Query: 173 -----LAPDSVLYLDIPPEKAAERGGYGGERYE--HLEFQRKVAQCYQML---RDSSWKI 222
L P LD+PPE AA R +R E LEF R+V + Y L + +
Sbjct: 117 EATRGLKPRLTFLLDLPPE-AALRRVRRPDRLEGLGLEFFRRVREGYLALARAEPGRFVV 175
Query: 223 IDACQSIEDVEKQLK 237
+DA E++ + ++
Sbjct: 176 LDATLPEEEIARAIQ 190
>sp|C0MGT8|KTHY_STRS7 Thymidylate kinase OS=Streptococcus equi subsp. zooepidemicus
(strain H70) GN=tmk PE=3 SV=1
Length = 211
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG D GKT+ RL+ L+ LG ++ R P ++ + I + + SH
Sbjct: 2 TRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPG-GVAIAEKIRQLILDVSH 60
Query: 112 --LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+DD T LL+ A R + +M A L+AG ++VDR+ S VA+ A +G+D I+
Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPA-LEAGHLVLVDRFIDSSVAYQGAGRGLDKQAIQ 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W + PD LY D+P E R ER E L+ ++V + Y ++
Sbjct: 120 WLNHFATDGVDPDLTLYFDVPSELGLARIAQNTEREVNRLDLEQLDLHQRVRKGYLELAL 179
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q +E V
Sbjct: 180 ENPQRIVKIDASQDLESV 197
>sp|A6UTV9|KTHY_META3 Probable thymidylate kinase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=tmk PE=3 SV=1
Length = 196
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 57 LVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDDHT 116
+V EG+D GKT+Q L YL G+ + +GQ+I L + + + +
Sbjct: 4 FIVFEGIDGSGKTTQAKLLADYLNGI------YTCEPTNGEIGQLIRKVLGGK-NCEKES 56
Query: 117 IHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLAPD 176
+ LLF+ +R E +E KL +I DRY YS + + S +GIDI++ + PD
Sbjct: 57 LALLFAGDRVEHIKEIEHKL-IENMVICDRYVYSSMVYQSIQGIDIDFIASINRFAKIPD 115
Query: 177 SVLYLDIPPEKAAERGG--YGGERYEHLEFQRKVAQCYQMLRD-------SSWKIIDA-C 226
++YLD+ E++ +R G E +E+ E +KV + Y + + + + +I+
Sbjct: 116 VLIYLDVSIEESLKRMGDRDSKEIFENKEILQKVNKKYMNIINERLFEPKNGYILINTDN 175
Query: 227 QSIEDVEKQLKEIVLDQ 243
+++E+V K++ + ++D+
Sbjct: 176 KTVEEVHKEIIKKLMDK 192
>sp|Q6AJE2|KTHY_DESPS Thymidylate kinase OS=Desulfotalea psychrophila (strain LSv54 / DSM
12343) GN=tmk PE=3 SV=1
Length = 202
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 52 DSRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
++ G L++ EG D GK++Q L +YL G V + F GQ I ++++
Sbjct: 3 NNPGKLIIFEGTDGAGKSTQIKMLANYLRSKGLDV-IASFEPTNGPYGQKIRQLYTDRNK 61
Query: 112 LDDHTIHLLFSANRWEK-RSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEI 170
+ + LF A+R E ++ + AG ++ DRY S A+ A G D+E
Sbjct: 62 VTRNEELELFLADRREHVNKLINPAISAGKIVLCDRYYLSTAAYQGALGFDVEEILQRNS 121
Query: 171 GLLAPDSVLYLDIPPEKAAER----GGYGGERYEHLEFQRKVAQCYQMLRDSSWKIIDAC 226
PD L L IP E R G +E E KV+ + L + I+AC
Sbjct: 122 FAPTPDLALLLQIPVEDGRRRITSSRGEETNDFEKAEMLEKVSTIFNSLSFPYIRHINAC 181
Query: 227 QSIEDVEKQL 236
QSI++V++ +
Sbjct: 182 QSIDNVQRDI 191
>sp|P0C8G2|KTHY_ASFWA Thymidylate kinase OS=African swine fever virus (isolate
Warthog/Namibia/Wart80/1980) GN=TMK PE=3 SV=1
Length = 239
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ +EG++ GK++Q RL LE + ++ RFP+ T+ G +I L+ +
Sbjct: 2 RGILIAIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMS 61
Query: 114 DHTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLL 173
+H LF+ + E + + A LK +IVDRY +SG+A++ A GI IE
Sbjct: 62 SEQLHKLFTKHCSEFVAEIAALLKLNFIVIVDRYIWSGLAYAQADGITIETKNT-----F 116
Query: 174 APDSVLYL 181
PD +L
Sbjct: 117 KPDYTFFL 124
>sp|A6UP44|KTHY_METVS Probable thymidylate kinase OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=tmk PE=3 SV=1
Length = 198
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 55 GALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLDD 114
+V EG+D GKT+Q L L + T +G+ I LS S
Sbjct: 2 NKFIVFEGIDGSGKTTQAKMLAEKLNAE------YTCEPTTGKIGRTIREVLSG-SECKK 54
Query: 115 HTIHLLFSANRWEKRSMMEAKLKAGTTLIVDRYSYSGVAFSSAKGIDIEWCKAPEIGLLA 174
T+ LLF+A+R E S +E L+ + ++ DRY YS + + + +GI E+ +
Sbjct: 55 ETLALLFAADRVEHVSEIEKMLQK-SHVVTDRYVYSSIIYQTMQGISKEFIYSINFFAKI 113
Query: 175 PDSVLYLDIPPEKAAERGGY-GGERYEHLEFQRKVAQCYQMLRD 217
PD V+ LD+ E+A +R + E +E +EFQ+K+ Q Y + +
Sbjct: 114 PDIVVILDVDTEEALKRMEFREKEIFEKIEFQKKIKQEYHKIAE 157
>sp|B2IP90|KTHY_STRPS Thymidylate kinase OS=Streptococcus pneumoniae (strain CGSP14)
GN=tmk PE=3 SV=1
Length = 212
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W L PD LY DI E+ R +R E LE +KV Q Y +L
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLELHKKVRQGYLSLLE 178
Query: 217 DSSWKI--IDACQSIEDVEKQLKEIVLDQVTACK 248
+I IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMDLAK 212
>sp|C0M7M5|KTHY_STRE4 Thymidylate kinase OS=Streptococcus equi subsp. equi (strain 4047)
GN=tmk PE=3 SV=1
Length = 211
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLE-GLGHSVELWRFPDRTTSVGQMISAYLSNQSH 111
+RG L+ EG D GKT+ RL+ L+ LG ++ R P ++ + I + + SH
Sbjct: 2 TRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPG-GVAIAEKIRQLILDVSH 60
Query: 112 --LDDHTIHLLFSANRWEK--RSMMEAKLKAGTTLIVDRYSYSGVAFSSA-KGID---IE 163
+DD T LL+ A R + +M A L++G ++VDR+ S VA+ A +G+D I+
Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPA-LESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQ 119
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCY-QMLR 216
W + PD LY D+P E R ER E L+ ++V + Y ++
Sbjct: 120 WLNHFATDGVDPDLTLYFDVPSELGLARIAQNTEREINRLDLEQLDLHQRVRKGYLELAL 179
Query: 217 DSSWKI--IDACQSIEDV 232
++ +I IDA Q +E V
Sbjct: 180 ENPQRIVKIDASQDLESV 197
>sp|Q46DH6|KTHY_METBF Probable thymidylate kinase OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=tmk PE=3 SV=1
Length = 205
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSHLD 113
RG L+ LEG+D GK++ +L E R P R T G + + QS D
Sbjct: 2 RGKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAI--QSDTD 59
Query: 114 DHTIHLLFSANRWEKRS-MMEAKLKAGTTLIVDRYS-----YSGVAFSSAKGIDIEWCKA 167
LF+A+ E + +++ L+ G +I DRYS Y G+ + +EW K
Sbjct: 60 QFAELFLFTADHAEHLAKLIKPALENGKIVISDRYSDSRYAYQGITLKTRLENPLEWVKD 119
Query: 168 PEIG-LLAPDSVLYLDIPPEKAAERGGYGGE--RYEHLEFQRKVAQCYQML---RDSSWK 221
+ PD DI PE + ER G GE ++E LEF + V + L +
Sbjct: 120 LHRSWTIVPDLTFLFDIRPEISIERCGKRGEQSKFEKLEFLQGVRAIFLKLAADDPERFV 179
Query: 222 IIDACQSIEDVEKQLKEIVLD 242
+IDA +S E +EK++ + +L+
Sbjct: 180 VIDASRSPEYIEKEVVKKILE 200
>sp|C1CRV9|KTHY_STRZT Thymidylate kinase OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=tmk PE=3 SV=1
Length = 212
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKSVLFDGMGLAK 212
>sp|A2BNS4|KTHY_PROMS Thymidylate kinase OS=Prochlorococcus marinus (strain AS9601)
GN=tmk PE=3 SV=1
Length = 212
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 54 RGALVVLEGLDRCGKTSQCSRLLSYL--EGL---GHSVELWRFPDRTTSVGQMISAYLSN 108
+G +V+EG+D CGKT+Q L +L GL G + R P + ++ L N
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPNSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61
Query: 109 QSHLDDHTIH--LLFSANRWEKRS-MMEAKLKAGTTLIVDRYSYSGVAFSS-AKGIDIEW 164
+ ++ LL+SA+R E S ++ L +I DR+S S +A+ + I++E
Sbjct: 62 NKNNKPSSLAELLLYSADRAEHVSKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121
Query: 165 CKAPEIGL---LAPDSVLYLDIPPEKAA-ERGGYGGERYEH--LEFQRKVAQCYQML-RD 217
K E + +PD +L+I PE++ R +R E + F KV + ++++ +
Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFRRKNEIPDRIESEGIRFLEKVNEGFKLIAKQ 181
Query: 218 SSWKIIDACQSIEDVEKQLKEIVLDQVTACK 248
+WK+I A Q+I+ + Q+KE +L+ + K
Sbjct: 182 KNWKVISASQNIQTISNQIKETLLNNFSNNK 212
>sp|C1CDT1|KTHY_STRZJ Thymidylate kinase OS=Streptococcus pneumoniae (strain JJA) GN=tmk
PE=3 SV=1
Length = 212
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 53 SRGALVVLEGLDRCGKTSQCSRLLSYLEGLGHSVELWRFPDRTTSVGQMISAYLSNQSH- 111
S+G LV LEG + GKTS LL LE G V R P +G+ I + + SH
Sbjct: 2 SKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVL-IGEKIREVILDPSHT 60
Query: 112 -LDDHTIHLLFSANRWEKRSMME---AKLKAGTTLIVDRYSYSGVAFSS-AKGIDIE--- 163
+D T LL+ A+R ++ ++E L+AG +I+DR+ S VA+ +G+DIE
Sbjct: 61 QMDAKTELLLYIASR--RQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAID 118
Query: 164 WCKAPEIGLLAPDSVLYLDIPPEKAAERGGYGGER------YEHLEFQRKVAQCYQMLRD 217
W L PD LY DI E+ R +R E L+ +KV Q Y L D
Sbjct: 119 WLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLD 178
Query: 218 SSWK---IIDACQSIEDVEKQLKEIVLDQVTACK 248
IDA +E V + K ++ D + K
Sbjct: 179 KEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,309,302
Number of Sequences: 539616
Number of extensions: 3745307
Number of successful extensions: 11247
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 467
Number of HSP's that attempted gapping in prelim test: 10503
Number of HSP's gapped (non-prelim): 602
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)