Query 025042
Match_columns 259
No_of_seqs 252 out of 1414
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 09:32:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025042.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025042hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1615 Phosphoserine phosphat 100.0 8.6E-33 1.9E-37 215.4 16.4 183 75-257 8-190 (227)
2 COG2217 ZntA Cation transport 100.0 4E-31 8.7E-36 248.2 10.7 228 5-258 325-617 (713)
3 KOG0207 Cation transport ATPas 100.0 3.3E-30 7.2E-35 239.7 8.3 228 5-258 492-803 (951)
4 PLN02954 phosphoserine phospha 100.0 9.9E-27 2.1E-31 193.5 20.1 187 72-258 1-187 (224)
5 COG0560 SerB Phosphoserine pho 99.9 9.4E-26 2E-30 185.4 16.3 174 81-259 3-179 (212)
6 PRK11133 serB phosphoserine ph 99.9 2.7E-24 5.8E-29 187.0 18.9 175 80-259 107-283 (322)
7 TIGR01488 HAD-SF-IB Haloacid D 99.9 2.2E-24 4.8E-29 172.8 17.1 172 85-259 1-177 (177)
8 PRK01122 potassium-transportin 99.9 1.9E-25 4.1E-30 209.8 9.4 198 38-258 253-525 (679)
9 PRK14010 potassium-transportin 99.9 2E-25 4.4E-30 209.5 8.2 199 38-259 253-522 (673)
10 TIGR01497 kdpB K+-transporting 99.9 1.2E-24 2.5E-29 204.2 8.5 199 38-259 254-527 (675)
11 TIGR00338 serB phosphoserine p 99.9 1.6E-22 3.4E-27 167.7 18.3 178 76-259 7-187 (219)
12 TIGR01511 ATPase-IB1_Cu copper 99.9 4.7E-25 1E-29 205.8 2.6 198 37-258 231-484 (562)
13 PRK10671 copA copper exporting 99.9 7.7E-24 1.7E-28 206.1 7.0 200 37-259 471-731 (834)
14 PRK11033 zntA zinc/cadmium/mer 99.9 3.2E-23 6.9E-28 198.8 8.2 196 38-258 391-646 (741)
15 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.9 2.8E-21 6E-26 157.8 17.8 172 82-259 3-182 (201)
16 TIGR01647 ATPase-IIIA_H plasma 99.9 4.3E-23 9.4E-28 198.3 8.1 221 37-259 240-553 (755)
17 PRK10517 magnesium-transportin 99.9 1.4E-23 3.1E-28 204.4 4.1 220 38-259 326-656 (902)
18 PRK15122 magnesium-transportin 99.9 1.2E-22 2.6E-27 198.2 7.0 220 38-259 324-656 (903)
19 TIGR01524 ATPase-IIIB_Mg magne 99.9 2.3E-22 4.9E-27 195.8 8.4 220 38-259 291-621 (867)
20 TIGR01512 ATPase-IB2_Cd heavy 99.9 3.4E-22 7.5E-27 185.9 8.8 198 37-258 200-443 (536)
21 TIGR02137 HSK-PSP phosphoserin 99.9 1.2E-20 2.6E-25 154.4 16.1 159 84-259 2-163 (203)
22 PRK09552 mtnX 2-hydroxy-3-keto 99.8 6.2E-20 1.3E-24 152.3 17.3 171 83-258 3-178 (219)
23 TIGR01525 ATPase-IB_hvy heavy 99.8 7.5E-22 1.6E-26 184.5 5.5 199 37-258 200-465 (556)
24 TIGR01517 ATPase-IIB_Ca plasma 99.8 5.2E-21 1.1E-25 188.1 11.1 105 153-259 577-687 (941)
25 TIGR03333 salvage_mtnX 2-hydro 99.8 1.8E-19 3.9E-24 149.0 17.8 167 86-258 2-174 (214)
26 TIGR01522 ATPase-IIA2_Ca golgi 99.8 1.9E-20 4E-25 183.2 10.1 105 153-259 526-636 (884)
27 TIGR01489 DKMTPPase-SF 2,3-dik 99.8 1.5E-18 3.3E-23 140.0 17.8 170 85-258 3-180 (188)
28 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.8 6.5E-19 1.4E-23 144.1 14.7 172 85-259 1-190 (202)
29 PRK13582 thrH phosphoserine ph 99.8 1.2E-18 2.7E-23 142.8 16.3 159 83-258 1-162 (205)
30 COG0474 MgtA Cation transport 99.8 2.2E-20 4.8E-25 182.6 6.9 220 38-259 303-657 (917)
31 TIGR01494 ATPase_P-type ATPase 99.8 2E-20 4.3E-25 173.1 3.4 196 37-258 184-424 (499)
32 KOG0202 Ca2+ transporting ATPa 99.8 7.4E-19 1.6E-23 163.0 9.9 98 153-258 582-695 (972)
33 COG2216 KdpB High-affinity K+ 99.8 6.4E-19 1.4E-23 155.9 8.4 83 153-258 445-527 (681)
34 COG4359 Uncharacterized conser 99.8 5.7E-17 1.2E-21 125.9 15.7 169 85-258 5-177 (220)
35 PF00702 Hydrolase: haloacid d 99.7 5.7E-19 1.2E-23 145.3 3.9 88 153-259 125-214 (215)
36 TIGR01657 P-ATPase-V P-type AT 99.7 8.8E-19 1.9E-23 174.1 4.2 61 38-98 403-463 (1054)
37 TIGR01106 ATPase-IIC_X-K sodiu 99.7 8.2E-18 1.8E-22 166.3 10.6 61 38-98 299-359 (997)
38 TIGR01116 ATPase-IIA1_Ca sarco 99.7 3.4E-17 7.5E-22 160.8 11.6 105 153-259 535-649 (917)
39 TIGR01523 ATPase-IID_K-Na pota 99.7 3.2E-17 6.9E-22 162.3 11.3 105 153-259 644-764 (1053)
40 TIGR01545 YfhB_g-proteo haloac 99.7 2.1E-16 4.5E-21 130.1 13.4 172 82-259 4-194 (210)
41 COG0546 Gph Predicted phosphat 99.7 3.5E-16 7.5E-21 129.9 14.6 92 154-259 88-181 (220)
42 PF06888 Put_Phosphatase: Puta 99.7 1.2E-15 2.6E-20 126.4 17.5 169 85-257 2-186 (234)
43 PRK11590 hypothetical protein; 99.7 7.9E-16 1.7E-20 127.0 15.2 172 82-259 5-195 (211)
44 PLN02770 haloacid dehalogenase 99.7 6.2E-16 1.3E-20 130.7 14.7 174 69-258 8-199 (248)
45 PRK10826 2-deoxyglucose-6-phos 99.7 1E-15 2.2E-20 127.2 15.2 92 153-258 90-183 (222)
46 PRK13288 pyrophosphatase PpaX; 99.7 1.3E-15 2.9E-20 125.7 13.8 91 154-258 81-173 (214)
47 PLN03243 haloacid dehalogenase 99.7 1.7E-15 3.7E-20 128.7 14.1 161 81-258 22-200 (260)
48 PF12710 HAD: haloacid dehalog 99.7 3.8E-16 8.3E-21 126.4 9.6 96 158-257 92-192 (192)
49 PRK13226 phosphoglycolate phos 99.7 2E-15 4.4E-20 126.0 13.9 91 154-258 94-186 (229)
50 PRK13222 phosphoglycolate phos 99.6 8.9E-15 1.9E-19 121.5 16.1 93 153-259 91-185 (226)
51 TIGR03351 PhnX-like phosphonat 99.6 8.9E-15 1.9E-19 121.2 16.0 94 153-258 85-181 (220)
52 TIGR01544 HAD-SF-IE haloacid d 99.6 1.7E-14 3.7E-19 122.1 17.3 171 85-257 24-228 (277)
53 TIGR01449 PGP_bact 2-phosphogl 99.6 6.6E-15 1.4E-19 121.2 14.0 91 154-258 84-176 (213)
54 PLN02575 haloacid dehalogenase 99.6 1.1E-14 2.3E-19 128.7 16.0 166 77-258 124-307 (381)
55 TIGR02009 PGMB-YQAB-SF beta-ph 99.6 1.2E-14 2.6E-19 117.0 15.1 157 83-258 1-177 (185)
56 PRK14988 GMP/IMP nucleotidase; 99.6 2.5E-15 5.5E-20 125.0 11.1 91 154-258 92-184 (224)
57 PRK13223 phosphoglycolate phos 99.6 6E-15 1.3E-19 126.3 13.5 91 154-258 100-192 (272)
58 TIGR01428 HAD_type_II 2-haloal 99.6 2E-14 4.4E-19 117.2 15.7 92 153-258 90-183 (198)
59 PRK13478 phosphonoacetaldehyde 99.6 7.8E-15 1.7E-19 125.3 13.5 92 154-258 100-194 (267)
60 TIGR01454 AHBA_synth_RP 3-amin 99.6 7.3E-15 1.6E-19 120.5 12.9 92 153-258 73-166 (205)
61 PRK13225 phosphoglycolate phos 99.6 1E-14 2.2E-19 124.7 12.9 89 153-258 140-230 (273)
62 TIGR02253 CTE7 HAD superfamily 99.6 5.3E-14 1.1E-18 116.6 15.3 91 154-258 93-186 (221)
63 KOG0204 Calcium transporting A 99.6 1.6E-14 3.5E-19 134.6 13.3 104 153-258 645-756 (1034)
64 TIGR01422 phosphonatase phosph 99.6 1.8E-14 3.9E-19 122.1 12.6 93 153-258 97-192 (253)
65 PRK11587 putative phosphatase; 99.6 8.8E-14 1.9E-18 115.3 16.0 91 153-258 81-173 (218)
66 TIGR01990 bPGM beta-phosphoglu 99.6 6.9E-14 1.5E-18 112.6 14.8 89 154-258 86-176 (185)
67 PRK10563 6-phosphogluconate ph 99.6 7.3E-14 1.6E-18 115.8 14.8 160 81-258 2-177 (221)
68 PRK06698 bifunctional 5'-methy 99.6 3.4E-14 7.3E-19 130.3 13.0 91 153-258 328-418 (459)
69 PRK09449 dUMP phosphatase; Pro 99.5 3.1E-13 6.8E-18 112.3 16.3 90 154-258 94-187 (224)
70 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 2.2E-13 4.8E-18 111.1 14.9 88 156-258 107-196 (197)
71 PLN02940 riboflavin kinase 99.5 1.4E-13 3.1E-18 123.0 13.3 92 153-258 91-185 (382)
72 TIGR02726 phenyl_P_delta pheny 99.5 1.1E-14 2.4E-19 115.5 5.3 113 78-258 2-116 (169)
73 TIGR02252 DREG-2 REG-2-like, H 99.5 3.8E-13 8.2E-18 110.1 14.2 90 154-258 104-196 (203)
74 TIGR02254 YjjG/YfnB HAD superf 99.5 4.2E-13 9.2E-18 111.2 14.3 90 154-258 96-189 (224)
75 PLN02779 haloacid dehalogenase 99.5 3.3E-13 7.1E-18 116.3 13.8 93 154-258 143-237 (286)
76 COG0637 Predicted phosphatase/ 99.5 3.6E-13 7.9E-18 111.8 13.6 163 82-258 1-177 (221)
77 PRK10725 fructose-1-P/6-phosph 99.5 4.9E-13 1.1E-17 108.0 13.5 89 154-258 87-177 (188)
78 TIGR01670 YrbI-phosphatas 3-de 99.5 2.8E-14 6E-19 111.9 5.8 73 163-258 36-110 (154)
79 PF13419 HAD_2: Haloacid dehal 99.5 1.6E-13 3.5E-18 108.6 9.7 93 152-258 74-168 (176)
80 PRK09484 3-deoxy-D-manno-octul 99.5 6.7E-14 1.4E-18 112.9 7.5 75 162-259 55-131 (183)
81 PRK09456 ?-D-glucose-1-phospha 99.5 8E-13 1.7E-17 108.0 13.3 161 84-258 1-176 (199)
82 cd01427 HAD_like Haloacid deha 99.5 2.6E-13 5.7E-18 102.7 9.3 105 154-258 23-131 (139)
83 COG1778 Low specificity phosph 99.5 7.1E-14 1.5E-18 106.3 5.7 114 77-259 2-118 (170)
84 TIGR02247 HAD-1A3-hyp Epoxide 99.5 1.1E-12 2.4E-17 108.0 13.3 92 153-258 92-187 (211)
85 TIGR01549 HAD-SF-IA-v1 haloaci 99.5 9.3E-13 2E-17 103.0 11.5 89 154-258 63-152 (154)
86 TIGR01509 HAD-SF-IA-v3 haloaci 99.4 1.2E-12 2.7E-17 104.8 11.8 90 154-258 84-175 (183)
87 TIGR01993 Pyr-5-nucltdase pyri 99.4 1.9E-12 4E-17 104.4 11.5 92 154-258 83-176 (184)
88 TIGR01656 Histidinol-ppas hist 99.4 8.9E-13 1.9E-17 102.6 8.6 93 155-258 27-136 (147)
89 TIGR01662 HAD-SF-IIIA HAD-supe 99.4 3.5E-12 7.6E-17 97.3 10.9 86 155-258 25-122 (132)
90 PLN02919 haloacid dehalogenase 99.4 4.3E-12 9.4E-17 126.2 14.3 165 78-258 70-253 (1057)
91 TIGR01672 AphA HAD superfamily 99.4 4.9E-12 1.1E-16 105.5 11.8 154 65-258 42-202 (237)
92 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 5.4E-12 1.2E-16 100.7 11.3 84 154-258 89-174 (175)
93 PRK08238 hypothetical protein; 99.4 8.4E-12 1.8E-16 114.2 12.7 146 84-259 11-158 (479)
94 PHA02597 30.2 hypothetical pro 99.4 1.1E-11 2.4E-16 100.9 12.0 91 154-258 73-163 (197)
95 PRK10748 flavin mononucleotide 99.3 2.8E-11 6.1E-16 101.6 13.9 85 154-258 112-199 (238)
96 KOG3120 Predicted haloacid deh 99.3 2.1E-11 4.6E-16 97.8 11.6 170 82-255 12-197 (256)
97 PRK08942 D,D-heptose 1,7-bisph 99.3 1.3E-11 2.8E-16 99.4 10.6 93 155-258 29-138 (181)
98 KOG0209 P-type ATPase [Inorgan 99.3 2.1E-11 4.6E-16 113.7 12.3 103 154-258 674-824 (1160)
99 PLN02177 glycerol-3-phosphate 99.3 6.2E-11 1.3E-15 108.7 13.9 96 155-259 110-207 (497)
100 TIGR01261 hisB_Nterm histidino 99.3 8.7E-12 1.9E-16 98.4 6.9 94 154-258 28-138 (161)
101 KOG0203 Na+/K+ ATPase, alpha s 99.3 1.8E-12 3.9E-17 121.0 3.4 60 38-97 321-380 (1019)
102 KOG0205 Plasma membrane H+-tra 99.3 1.8E-11 3.8E-16 111.7 9.3 102 154-258 491-602 (942)
103 TIGR00213 GmhB_yaeD D,D-heptos 99.3 3.9E-11 8.5E-16 96.1 10.3 99 155-258 26-141 (176)
104 COG0561 Cof Predicted hydrolas 99.3 4.7E-11 1E-15 101.7 11.1 41 219-259 182-224 (264)
105 TIGR01487 SPP-like sucrose-pho 99.2 7.9E-11 1.7E-15 97.3 11.1 38 222-259 143-182 (215)
106 TIGR01681 HAD-SF-IIIC HAD-supe 99.2 3.7E-11 8.1E-16 91.2 8.3 85 155-257 29-125 (128)
107 PRK15126 thiamin pyrimidine py 99.2 1E-10 2.2E-15 100.1 11.1 40 220-259 182-223 (272)
108 TIGR01685 MDP-1 magnesium-depe 99.2 6.1E-12 1.3E-16 100.1 3.1 93 154-258 44-148 (174)
109 PRK01158 phosphoglycolate phos 99.2 1E-10 2.2E-15 97.4 10.6 38 222-259 153-192 (230)
110 TIGR01664 DNA-3'-Pase DNA 3'-p 99.2 1.3E-10 2.8E-15 92.2 10.4 87 156-258 43-153 (166)
111 PRK10976 putative hydrolase; P 99.2 2.3E-10 5E-15 97.5 11.4 40 220-259 184-225 (266)
112 PRK06769 hypothetical protein; 99.2 2.4E-10 5.2E-15 91.3 10.5 91 155-258 28-128 (173)
113 COG1011 Predicted hydrolase (H 99.2 7.8E-10 1.7E-14 91.8 13.2 89 154-257 98-189 (229)
114 TIGR01668 YqeG_hyp_ppase HAD s 99.2 2.7E-10 5.9E-15 90.7 9.8 81 155-258 43-127 (170)
115 COG4087 Soluble P-type ATPase 99.1 7.3E-11 1.6E-15 87.1 5.6 83 154-258 29-111 (152)
116 KOG0208 Cation transport ATPas 99.1 7.5E-11 1.6E-15 111.9 6.8 60 38-97 423-482 (1140)
117 PRK10513 sugar phosphate phosp 99.1 5.4E-10 1.2E-14 95.4 10.7 40 220-259 190-231 (270)
118 TIGR01691 enolase-ppase 2,3-di 99.1 2.2E-09 4.8E-14 88.8 13.0 90 153-258 93-187 (220)
119 TIGR01482 SPP-subfamily Sucros 99.1 1.2E-09 2.6E-14 90.6 10.6 40 220-259 143-184 (225)
120 PRK05446 imidazole glycerol-ph 99.1 1.1E-09 2.3E-14 96.5 10.0 93 154-258 29-139 (354)
121 PRK11009 aphA acid phosphatase 99.1 1.3E-09 2.7E-14 91.1 9.9 86 154-258 113-202 (237)
122 PF08282 Hydrolase_3: haloacid 99.0 2.2E-09 4.8E-14 89.8 10.8 38 222-259 182-221 (254)
123 TIGR01533 lipo_e_P4 5'-nucleot 99.0 6.3E-09 1.4E-13 88.2 13.2 129 81-256 73-204 (266)
124 PRK10530 pyridoxal phosphate ( 99.0 1.9E-10 4E-15 98.3 3.4 89 157-259 139-234 (272)
125 PRK03669 mannosyl-3-phosphogly 99.0 4.2E-09 9.1E-14 90.2 11.6 41 219-259 180-225 (271)
126 PLN02811 hydrolase 99.0 5.5E-09 1.2E-13 86.7 11.4 94 153-258 76-175 (220)
127 TIGR01652 ATPase-Plipid phosph 99.0 9E-10 1.9E-14 110.4 7.8 106 153-259 629-787 (1057)
128 PLN02887 hydrolase family prot 99.0 4.5E-09 9.8E-14 98.2 11.8 40 220-259 501-542 (580)
129 KOG0210 P-type ATPase [Inorgan 99.0 1.1E-09 2.5E-14 100.7 6.3 105 153-258 656-799 (1051)
130 TIGR00099 Cof-subfamily Cof su 98.9 8.5E-09 1.8E-13 87.4 11.3 40 220-259 182-223 (256)
131 TIGR01686 FkbH FkbH-like domai 98.9 2.9E-09 6.2E-14 93.4 7.2 84 156-258 32-121 (320)
132 PRK00192 mannosyl-3-phosphogly 98.9 2.2E-08 4.8E-13 85.8 11.5 38 221-259 186-226 (273)
133 PRK12702 mannosyl-3-phosphogly 98.9 2.8E-08 6.1E-13 84.5 11.3 36 224-259 206-245 (302)
134 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 1.6E-08 3.5E-13 85.1 9.6 83 155-256 24-111 (242)
135 TIGR01484 HAD-SF-IIB HAD-super 98.8 2.2E-08 4.8E-13 81.9 9.4 41 219-259 156-198 (204)
136 TIGR02461 osmo_MPG_phos mannos 98.8 5.8E-08 1.3E-12 80.8 10.5 36 224-259 179-218 (225)
137 PHA02530 pseT polynucleotide k 98.8 2.6E-08 5.6E-13 86.4 8.0 98 154-258 186-287 (300)
138 PLN03190 aminophospholipid tra 98.8 1E-08 2.3E-13 102.9 6.2 106 153-259 724-890 (1178)
139 PRK10187 trehalose-6-phosphate 98.7 1.1E-07 2.4E-12 81.2 10.9 40 219-258 167-208 (266)
140 KOG2914 Predicted haloacid-hal 98.7 5.9E-07 1.3E-11 74.0 14.5 163 81-258 8-187 (222)
141 TIGR01663 PNK-3'Pase polynucle 98.7 5.6E-08 1.2E-12 89.8 9.4 86 156-257 198-301 (526)
142 TIGR01485 SPP_plant-cyano sucr 98.7 4.5E-08 9.7E-13 82.7 8.0 40 219-258 160-201 (249)
143 smart00775 LNS2 LNS2 domain. T 98.7 1.1E-07 2.4E-12 74.7 9.6 98 155-258 27-137 (157)
144 COG2179 Predicted hydrolase of 98.7 1.9E-07 4.1E-12 72.3 9.4 78 155-255 46-126 (175)
145 PRK14502 bifunctional mannosyl 98.6 5.5E-07 1.2E-11 84.7 11.7 37 223-259 610-650 (694)
146 KOG3085 Predicted hydrolase (H 98.6 1.6E-06 3.4E-11 72.0 12.5 90 154-258 112-204 (237)
147 TIGR01675 plant-AP plant acid 98.5 2E-06 4.2E-11 71.3 11.3 131 82-254 76-210 (229)
148 PF05822 UMPH-1: Pyrimidine 5' 98.5 7E-07 1.5E-11 74.3 8.6 115 141-257 76-196 (246)
149 COG4030 Uncharacterized protei 98.5 1.1E-06 2.3E-11 71.4 9.3 171 86-259 3-225 (315)
150 PLN02645 phosphoglycolate phos 98.5 1.3E-06 2.9E-11 76.2 10.6 71 69-195 14-87 (311)
151 smart00577 CPDc catalytic doma 98.5 2.8E-07 6.1E-12 71.7 5.5 87 154-257 44-132 (148)
152 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.5 1.2E-07 2.6E-12 80.6 3.4 92 156-258 121-215 (257)
153 PF03767 Acid_phosphat_B: HAD 98.4 6.6E-07 1.4E-11 74.6 6.7 98 146-255 106-207 (229)
154 TIGR01452 PGP_euk phosphoglyco 98.4 1.3E-06 2.9E-11 75.1 8.7 91 156-258 144-238 (279)
155 PRK10444 UMP phosphatase; Prov 98.4 1.7E-06 3.6E-11 73.2 9.0 38 221-258 170-210 (248)
156 TIGR01684 viral_ppase viral ph 98.4 1.1E-06 2.3E-11 74.9 7.8 44 155-200 145-189 (301)
157 COG0241 HisB Histidinol phosph 98.4 4.3E-06 9.2E-11 66.6 10.6 93 155-259 31-141 (181)
158 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.4 4.4E-06 9.5E-11 70.6 11.0 37 222-258 175-214 (249)
159 PF09419 PGP_phosphatase: Mito 98.3 6.1E-06 1.3E-10 65.1 9.7 82 155-256 59-153 (168)
160 TIGR01680 Veg_Stor_Prot vegeta 98.3 1E-05 2.2E-10 68.3 11.0 97 147-254 137-236 (275)
161 KOG3109 Haloacid dehalogenase- 98.3 1.6E-05 3.4E-10 64.4 11.2 108 142-259 83-197 (244)
162 PHA03398 viral phosphatase sup 98.3 2.9E-06 6.3E-11 72.3 7.3 44 155-200 147-191 (303)
163 PF12689 Acid_PPase: Acid Phos 98.2 9E-07 1.9E-11 70.0 3.6 89 154-251 44-135 (169)
164 PF08235 LNS2: LNS2 (Lipin/Ned 98.2 8.6E-06 1.9E-10 63.4 8.7 98 156-258 28-137 (157)
165 PF05116 S6PP: Sucrose-6F-phos 98.2 4E-05 8.7E-10 64.7 13.0 37 222-258 161-199 (247)
166 PF13344 Hydrolase_6: Haloacid 98.2 1.2E-05 2.6E-10 58.3 8.3 41 155-195 14-57 (101)
167 PRK14501 putative bifunctional 98.2 1.3E-05 2.9E-10 77.8 10.5 40 219-258 650-689 (726)
168 KOG0206 P-type ATPase [General 98.1 3.8E-06 8.1E-11 83.3 6.1 105 153-258 649-812 (1151)
169 PF08645 PNK3P: Polynucleotide 98.1 4.7E-06 1E-10 65.5 4.4 81 156-252 30-130 (159)
170 COG2503 Predicted secreted aci 98.0 8.1E-05 1.8E-09 61.2 10.0 127 82-255 78-208 (274)
171 PLN02499 glycerol-3-phosphate 97.9 0.00013 2.8E-09 66.6 11.0 91 156-257 97-189 (498)
172 TIGR02463 MPGP_rel mannosyl-3- 97.9 2.2E-05 4.7E-10 65.0 5.6 39 221-259 174-214 (221)
173 TIGR02244 HAD-IG-Ncltidse HAD 97.8 0.00028 6E-09 62.1 10.9 39 155-193 184-223 (343)
174 COG0647 NagD Predicted sugar p 97.8 5.6E-05 1.2E-09 64.2 6.1 57 78-190 3-59 (269)
175 COG3769 Predicted hydrolase (H 97.7 0.00041 8.9E-09 56.4 10.3 84 158-258 137-227 (274)
176 COG4996 Predicted phosphatase 97.7 5.3E-05 1.1E-09 56.4 4.4 78 154-250 40-126 (164)
177 COG4229 Predicted enolase-phos 97.6 0.0024 5.2E-08 50.5 12.0 93 153-258 101-195 (229)
178 KOG3128 Uncharacterized conser 97.6 0.00011 2.3E-09 60.9 4.7 194 62-257 9-245 (298)
179 TIGR01689 EcbF-BcbF capsule bi 97.5 0.00033 7E-09 52.8 6.6 45 155-199 24-83 (126)
180 TIGR02471 sucr_syn_bact_C sucr 97.4 0.00011 2.4E-09 61.5 3.3 37 222-258 155-193 (236)
181 PF11019 DUF2608: Protein of u 97.4 0.0031 6.7E-08 53.4 11.7 98 155-257 81-195 (252)
182 TIGR02463 MPGP_rel mannosyl-3- 97.4 0.00038 8.1E-09 57.5 5.9 36 160-195 21-56 (221)
183 TIGR02251 HIF-SF_euk Dullard-l 97.3 0.00016 3.5E-09 57.0 3.1 86 154-256 41-128 (162)
184 PTZ00174 phosphomannomutase; P 97.3 0.00044 9.5E-09 58.4 5.9 38 219-258 181-222 (247)
185 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.3 0.0002 4.3E-09 60.2 3.0 89 157-258 140-232 (242)
186 PLN02382 probable sucrose-phos 97.2 0.00026 5.7E-09 64.2 3.3 38 221-258 170-212 (413)
187 TIGR01486 HAD-SF-IIB-MPGP mann 97.2 0.0003 6.6E-09 59.6 3.3 38 222-259 172-213 (256)
188 TIGR01486 HAD-SF-IIB-MPGP mann 97.1 0.001 2.2E-08 56.4 5.9 37 159-195 20-56 (256)
189 TIGR01456 CECR5 HAD-superfamil 97.1 0.0017 3.6E-08 57.1 7.1 40 156-195 17-64 (321)
190 PTZ00445 p36-lilke protein; Pr 97.0 0.0065 1.4E-07 49.5 8.7 100 155-258 75-196 (219)
191 PTZ00174 phosphomannomutase; P 96.9 0.00069 1.5E-08 57.2 3.1 17 82-98 4-20 (247)
192 TIGR01460 HAD-SF-IIA Haloacid 96.9 0.0056 1.2E-07 51.3 8.3 40 156-195 15-58 (236)
193 KOG2882 p-Nitrophenyl phosphat 96.9 0.013 2.8E-07 50.0 10.1 66 74-195 13-81 (306)
194 TIGR00685 T6PP trehalose-phosp 96.7 0.0012 2.5E-08 55.6 2.9 37 222-258 163-201 (244)
195 PF13242 Hydrolase_like: HAD-h 96.5 0.0034 7.3E-08 42.6 3.7 35 224-258 3-40 (75)
196 COG1877 OtsB Trehalose-6-phosp 96.5 0.023 4.9E-07 48.4 9.3 41 219-259 175-217 (266)
197 PLN02423 phosphomannomutase 96.5 0.0019 4.1E-08 54.5 2.8 39 217-258 180-222 (245)
198 TIGR02250 FCP1_euk FCP1-like p 96.4 0.007 1.5E-07 47.4 5.4 48 154-203 57-104 (156)
199 PF06941 NT5C: 5' nucleotidase 96.3 0.013 2.8E-07 47.3 6.7 31 153-183 71-101 (191)
200 PLN02423 phosphomannomutase 96.3 0.011 2.3E-07 49.9 6.3 24 157-181 26-49 (245)
201 PF03031 NIF: NLI interacting 96.2 0.0052 1.1E-07 48.0 3.7 40 154-194 35-74 (159)
202 KOG2116 Protein involved in pl 95.6 0.034 7.4E-07 52.1 6.5 130 82-255 529-665 (738)
203 TIGR01652 ATPase-Plipid phosph 95.5 0.0023 4.9E-08 64.9 -1.4 61 38-98 304-374 (1057)
204 COG5083 SMP2 Uncharacterized p 95.4 0.048 1E-06 48.9 6.4 28 82-109 374-401 (580)
205 PLN02645 phosphoglycolate phos 94.8 0.023 5.1E-07 49.6 3.1 36 223-258 228-266 (311)
206 TIGR02245 HAD_IIID1 HAD-superf 94.8 0.058 1.3E-06 43.8 4.9 40 155-195 45-84 (195)
207 PF05152 DUF705: Protein of un 94.6 0.094 2E-06 44.6 6.0 46 157-204 144-189 (297)
208 COG3700 AphA Acid phosphatase 94.6 0.073 1.6E-06 42.1 4.9 85 155-258 114-202 (237)
209 TIGR02471 sucr_syn_bact_C sucr 94.5 0.029 6.2E-07 46.8 2.6 32 163-195 23-54 (236)
210 KOG3040 Predicted sugar phosph 94.2 0.23 5E-06 40.4 7.1 29 224-252 180-210 (262)
211 PLN02580 trehalose-phosphatase 94.2 0.045 9.8E-07 49.0 3.3 35 224-258 299-338 (384)
212 KOG2961 Predicted hydrolase (H 94.2 0.42 9.1E-06 37.0 8.0 35 223-257 119-157 (190)
213 PLN03017 trehalose-phosphatase 94.1 0.13 2.7E-06 45.9 5.9 34 225-258 282-320 (366)
214 TIGR01458 HAD-SF-IIA-hyp3 HAD- 94.1 0.3 6.5E-06 41.4 8.1 40 156-195 22-64 (257)
215 TIGR01452 PGP_euk phosphoglyco 94.0 0.3 6.5E-06 41.9 8.1 41 155-195 18-61 (279)
216 PRK10444 UMP phosphatase; Prov 93.9 0.37 8E-06 40.7 8.2 41 155-195 17-60 (248)
217 PLN02205 alpha,alpha-trehalose 93.7 0.052 1.1E-06 53.7 3.2 43 217-259 753-800 (854)
218 COG3882 FkbH Predicted enzyme 93.6 0.21 4.4E-06 45.7 6.4 82 156-252 256-339 (574)
219 PLN02151 trehalose-phosphatase 93.2 0.2 4.4E-06 44.4 5.7 34 225-258 268-306 (354)
220 COG5663 Uncharacterized conser 92.6 0.34 7.3E-06 38.0 5.4 30 155-185 72-101 (194)
221 PLN02580 trehalose-phosphatase 92.0 0.37 7.9E-06 43.3 5.7 39 155-194 141-179 (384)
222 PRK10530 pyridoxal phosphate ( 90.7 1.1 2.5E-05 37.7 7.4 40 156-195 21-60 (272)
223 PLN02205 alpha,alpha-trehalose 90.6 0.49 1.1E-05 47.0 5.6 37 156-192 617-654 (854)
224 PLN03190 aminophospholipid tra 90.0 0.15 3.2E-06 52.4 1.4 31 68-98 438-468 (1178)
225 TIGR01460 HAD-SF-IIA Haloacid 89.2 0.38 8.3E-06 40.2 3.2 36 223-258 186-225 (236)
226 PF05761 5_nucleotid: 5' nucle 89.2 1.1 2.4E-05 41.2 6.4 37 156-192 184-220 (448)
227 KOG1618 Predicted phosphatase 88.4 2.3 4.9E-05 37.0 7.2 40 156-195 52-99 (389)
228 PF02358 Trehalose_PPase: Treh 87.6 0.31 6.7E-06 40.6 1.6 37 223-259 162-203 (235)
229 COG0731 Fe-S oxidoreductases [ 87.3 2.1 4.6E-05 37.0 6.5 41 151-194 88-129 (296)
230 PF02358 Trehalose_PPase: Treh 85.4 1.3 2.8E-05 36.9 4.2 36 155-190 19-55 (235)
231 PLN02382 probable sucrose-phos 85.4 1.5 3.3E-05 39.9 5.0 13 85-97 11-23 (413)
232 TIGR02468 sucrsPsyn_pln sucros 82.4 6.2 0.00014 40.1 8.1 34 223-256 953-990 (1050)
233 PLN03064 alpha,alpha-trehalose 81.9 2.7 5.8E-05 42.3 5.4 78 81-202 589-667 (934)
234 KOG3040 Predicted sugar phosph 81.0 7 0.00015 32.1 6.5 40 156-195 24-66 (262)
235 PLN02151 trehalose-phosphatase 80.9 1.6 3.5E-05 38.7 3.2 13 83-95 98-110 (354)
236 PLN03017 trehalose-phosphatase 80.2 1.9 4.1E-05 38.5 3.4 13 83-95 111-123 (366)
237 PLN03063 alpha,alpha-trehalose 79.9 4.3 9.4E-05 40.3 6.1 39 155-193 532-571 (797)
238 TIGR00685 T6PP trehalose-phosp 79.6 1 2.2E-05 37.7 1.5 15 82-96 2-16 (244)
239 KOG4549 Magnesium-dependent ph 79.1 7.7 0.00017 29.1 5.7 85 154-248 43-130 (144)
240 PF00122 E1-E2_ATPase: E1-E2 A 78.6 0.14 3.1E-06 42.3 -4.0 42 38-79 189-230 (230)
241 PLN02588 glycerol-3-phosphate 76.3 16 0.00036 34.0 8.3 65 156-233 134-199 (525)
242 KOG2882 p-Nitrophenyl phosphat 73.6 5.2 0.00011 34.5 4.1 37 220-256 219-258 (306)
243 COG0647 NagD Predicted sugar p 72.8 5.4 0.00012 34.1 4.0 37 222-258 187-226 (269)
244 COG4850 Uncharacterized conser 69.7 24 0.00052 31.0 7.2 94 154-255 195-293 (373)
245 PF09949 DUF2183: Uncharacteri 68.9 32 0.00069 24.7 6.8 31 225-255 49-80 (100)
246 PF14336 DUF4392: Domain of un 68.2 27 0.00059 30.2 7.5 37 158-194 63-100 (291)
247 KOG0541 Alkyl hydroperoxide re 66.3 19 0.00041 28.1 5.3 57 156-216 63-120 (171)
248 KOG2470 Similar to IMP-GMP spe 63.1 12 0.00027 33.1 4.3 33 157-189 242-274 (510)
249 KOG2630 Enolase-phosphatase E- 62.9 31 0.00067 28.8 6.3 87 154-258 122-215 (254)
250 KOG3189 Phosphomannomutase [Li 62.4 4.6 9.9E-05 32.8 1.5 31 223-254 190-224 (252)
251 KOG0323 TFIIF-interacting CTD 62.0 12 0.00026 36.0 4.3 51 154-206 200-250 (635)
252 TIGR01456 CECR5 HAD-superfamil 59.5 9.9 0.00021 33.3 3.2 37 222-258 230-282 (321)
253 smart00577 CPDc catalytic doma 59.1 6.9 0.00015 30.0 1.9 16 83-98 2-17 (148)
254 TIGR02251 HIF-SF_euk Dullard-l 58.7 6.1 0.00013 30.9 1.6 15 84-98 2-16 (162)
255 KOG3107 Predicted haloacid deh 56.2 20 0.00042 32.2 4.4 33 225-257 408-441 (468)
256 TIGR02765 crypto_DASH cryptoch 55.2 28 0.0006 31.8 5.5 44 158-203 61-104 (429)
257 COG3769 Predicted hydrolase (H 54.8 16 0.00035 30.3 3.4 37 159-195 27-63 (274)
258 PF00875 DNA_photolyase: DNA p 53.9 14 0.00031 28.6 3.0 44 158-203 53-96 (165)
259 KOG0206 P-type ATPase [General 51.7 8.1 0.00018 39.7 1.5 34 66-99 370-403 (1151)
260 PF06014 DUF910: Bacterial pro 51.6 5.4 0.00012 25.9 0.2 25 231-257 7-31 (62)
261 PRK13762 tRNA-modifying enzyme 49.3 34 0.00075 30.0 4.9 30 153-182 140-169 (322)
262 TIGR01658 EYA-cons_domain eyes 48.7 49 0.0011 27.9 5.4 33 225-257 213-247 (274)
263 TIGR02250 FCP1_euk FCP1-like p 48.6 12 0.00026 29.1 1.8 17 82-98 5-21 (156)
264 KOG0208 Cation transport ATPas 47.5 54 0.0012 33.2 6.3 100 139-250 633-732 (1140)
265 cd05014 SIS_Kpsf KpsF-like pro 46.4 23 0.0005 25.9 3.0 33 156-188 59-91 (128)
266 PF04123 DUF373: Domain of unk 46.3 1E+02 0.0022 27.4 7.4 25 160-184 53-79 (344)
267 PRK05340 UDP-2,3-diacylglucosa 46.3 1.2E+02 0.0027 25.0 7.7 36 159-194 58-94 (241)
268 PF03332 PMM: Eukaryotic phosp 42.7 5.6 0.00012 32.8 -0.9 34 223-257 159-196 (220)
269 TIGR03365 Bsubt_queE 7-cyano-7 42.2 24 0.00053 29.4 2.8 32 153-184 82-113 (238)
270 KOG2134 Polynucleotide kinase 41.8 15 0.00033 32.9 1.5 18 82-99 74-91 (422)
271 COG0809 QueA S-adenosylmethion 41.8 41 0.00088 29.7 4.1 19 160-178 188-206 (348)
272 TIGR01501 MthylAspMutase methy 41.3 1.6E+02 0.0034 22.4 7.0 45 156-202 65-117 (134)
273 COG2062 SixA Phosphohistidine 40.8 1.3E+02 0.0027 23.7 6.4 36 159-194 33-72 (163)
274 COG4632 EpsL Exopolysaccharide 40.5 14 0.00031 31.4 1.1 28 67-94 161-188 (320)
275 PRK05590 hypothetical protein; 39.5 13 0.00029 29.1 0.7 24 230-253 49-74 (166)
276 COG1171 IlvA Threonine dehydra 39.1 75 0.0016 28.3 5.4 75 159-257 59-137 (347)
277 COG0078 ArgF Ornithine carbamo 39.1 1.1E+02 0.0024 26.6 6.3 62 172-251 100-164 (310)
278 cd05008 SIS_GlmS_GlmD_1 SIS (S 39.0 38 0.00083 24.6 3.2 32 156-187 58-89 (126)
279 TIGR02826 RNR_activ_nrdG3 anae 39.0 46 0.00099 25.6 3.7 37 157-193 74-111 (147)
280 COG0678 AHP1 Peroxiredoxin [Po 38.7 61 0.0013 25.2 4.1 39 157-195 58-97 (165)
281 PRK11145 pflA pyruvate formate 38.5 2.2E+02 0.0048 23.5 8.1 30 153-182 80-110 (246)
282 PF13911 AhpC-TSA_2: AhpC/TSA 38.5 76 0.0017 22.7 4.7 36 162-197 4-39 (115)
283 PRK01424 S-adenosylmethionine: 38.4 66 0.0014 28.7 4.9 66 160-249 208-278 (366)
284 COG4483 Uncharacterized protei 37.8 25 0.00053 23.0 1.6 25 231-257 7-31 (68)
285 PRK02261 methylaspartate mutas 37.4 1.8E+02 0.0039 22.0 7.0 46 155-202 66-119 (137)
286 TIGR01854 lipid_A_lpxH UDP-2,3 37.4 1.9E+02 0.0042 23.7 7.5 36 159-194 56-92 (231)
287 cd05710 SIS_1 A subgroup of th 36.8 48 0.001 24.2 3.4 32 156-187 59-90 (120)
288 cd02072 Glm_B12_BD B12 binding 36.6 1.2E+02 0.0027 22.7 5.5 46 155-202 62-115 (128)
289 cd05017 SIS_PGI_PMI_1 The memb 36.0 84 0.0018 22.8 4.6 37 156-194 55-91 (119)
290 PF06437 ISN1: IMP-specific 5' 35.5 22 0.00047 32.0 1.5 32 224-255 347-389 (408)
291 KOG2469 IMP-GMP specific 5'-nu 35.3 20 0.00044 32.3 1.3 89 160-250 203-314 (424)
292 PRK00147 queA S-adenosylmethio 35.2 74 0.0016 28.3 4.7 66 160-249 186-256 (342)
293 COG1535 EntB Isochorismate hyd 34.5 62 0.0013 26.0 3.7 19 162-180 133-151 (218)
294 PF00578 AhpC-TSA: AhpC/TSA fa 34.4 58 0.0013 23.3 3.5 38 158-195 46-83 (124)
295 PF11549 Sec31: Protein transp 33.5 15 0.00033 22.5 0.1 8 248-255 24-31 (51)
296 PF13380 CoA_binding_2: CoA bi 33.1 55 0.0012 23.9 3.2 39 156-194 64-103 (116)
297 TIGR03127 RuMP_HxlB 6-phospho 33.0 54 0.0012 25.7 3.3 34 156-189 84-117 (179)
298 PF02547 Queuosine_synth: Queu 32.8 53 0.0012 29.1 3.5 66 160-247 186-254 (341)
299 cd06259 YdcF-like YdcF-like. Y 32.1 1.5E+02 0.0033 22.2 5.7 76 160-251 23-106 (150)
300 TIGR03470 HpnH hopanoid biosyn 31.7 52 0.0011 28.7 3.3 30 153-182 82-111 (318)
301 TIGR02495 NrdG2 anaerobic ribo 31.6 1E+02 0.0022 24.3 4.8 30 153-182 72-101 (191)
302 COG1208 GCD1 Nucleoside-diphos 31.4 2.3E+02 0.0051 25.2 7.5 80 158-254 33-114 (358)
303 PF01380 SIS: SIS domain SIS d 31.4 68 0.0015 23.2 3.5 34 155-188 64-97 (131)
304 TIGR00113 queA S-adenosylmethi 31.3 91 0.002 27.7 4.7 66 160-249 187-257 (344)
305 cd05013 SIS_RpiR RpiR-like pro 31.0 58 0.0013 23.7 3.1 30 157-186 73-102 (139)
306 KOG2469 IMP-GMP specific 5'-nu 30.8 2.4E+02 0.0052 25.7 7.2 18 79-96 23-40 (424)
307 cd02071 MM_CoA_mut_B12_BD meth 30.8 1.4E+02 0.003 21.9 5.0 45 155-201 62-108 (122)
308 TIGR03556 photolyase_8HDF deox 30.7 67 0.0015 29.8 4.0 37 159-195 56-92 (471)
309 PRK13717 conjugal transfer pro 30.0 43 0.00092 25.1 2.0 18 77-94 39-56 (128)
310 KOG1250 Threonine/serine dehyd 29.2 2.1E+02 0.0045 26.1 6.5 74 158-255 99-175 (457)
311 PRK10076 pyruvate formate lyas 28.9 70 0.0015 26.3 3.4 30 154-183 49-79 (213)
312 TIGR00591 phr2 photolyase PhrI 28.8 78 0.0017 29.1 4.1 37 159-195 79-115 (454)
313 TIGR02766 crypt_chrom_pln cryp 28.8 1.7E+02 0.0037 27.1 6.3 44 158-203 51-95 (475)
314 cd03018 PRX_AhpE_like Peroxire 28.8 99 0.0021 23.0 4.1 30 164-193 55-84 (149)
315 COG2237 Predicted membrane pro 28.5 1.7E+02 0.0036 26.2 5.7 23 160-182 53-77 (364)
316 cd01715 ETF_alpha The electron 27.6 2.9E+02 0.0063 21.3 7.4 84 154-252 11-95 (168)
317 COG0528 PyrH Uridylate kinase 27.5 3.7E+02 0.0081 22.6 7.4 37 159-195 32-68 (238)
318 cd03017 PRX_BCP Peroxiredoxin 27.4 1.1E+02 0.0024 22.4 4.1 14 165-178 73-86 (140)
319 PF03808 Glyco_tran_WecB: Glyc 27.2 2.9E+02 0.0062 21.6 6.6 19 161-179 38-56 (172)
320 cd05006 SIS_GmhA Phosphoheptos 26.3 72 0.0016 25.0 3.0 30 155-184 112-141 (177)
321 TIGR02109 PQQ_syn_pqqE coenzym 25.9 1.3E+02 0.0027 26.6 4.8 30 153-182 63-92 (358)
322 cd05005 SIS_PHI Hexulose-6-pho 25.8 81 0.0017 24.7 3.2 33 156-188 87-119 (179)
323 PRK13937 phosphoheptose isomer 25.6 78 0.0017 25.2 3.1 32 156-187 118-149 (188)
324 cd04795 SIS SIS domain. SIS (S 25.5 91 0.002 20.6 3.1 23 156-178 59-81 (87)
325 TIGR03489 cas_csp1 CRISPR-asso 25.2 68 0.0015 27.2 2.6 32 223-257 231-262 (292)
326 PRK05301 pyrroloquinoline quin 24.6 1.3E+02 0.0029 26.8 4.7 30 153-182 72-101 (378)
327 cd03013 PRX5_like Peroxiredoxi 24.5 1.3E+02 0.0027 23.2 4.0 36 159-194 52-88 (155)
328 TIGR00696 wecB_tagA_cpsF bacte 24.3 2.5E+02 0.0054 22.3 5.7 27 161-188 38-64 (177)
329 PF05761 5_nucleotid: 5' nucle 24.1 44 0.00096 30.9 1.5 18 79-96 8-25 (448)
330 TIGR02493 PFLA pyruvate format 24.0 1.3E+02 0.0029 24.5 4.3 29 153-181 75-104 (235)
331 KOG1605 TFIIF-interacting CTD 23.8 51 0.0011 28.1 1.8 39 155-194 131-169 (262)
332 PF02219 MTHFR: Methylenetetra 23.7 1.4E+02 0.0031 25.5 4.6 35 159-193 252-287 (287)
333 COG0381 WecB UDP-N-acetylgluco 23.7 1.8E+02 0.0038 26.4 5.1 84 161-254 20-107 (383)
334 PF09432 THP2: Tho complex sub 23.7 15 0.00033 27.4 -1.3 25 230-254 93-117 (132)
335 COG1209 RfbA dTDP-glucose pyro 23.7 4.8E+02 0.01 22.5 7.8 76 155-250 29-110 (286)
336 PF08444 Gly_acyl_tr_C: Aralky 23.6 1.4E+02 0.003 20.9 3.6 35 160-194 41-75 (89)
337 PRK01045 ispH 4-hydroxy-3-meth 23.6 4.9E+02 0.011 22.6 8.6 25 225-250 99-123 (298)
338 PRK03692 putative UDP-N-acetyl 23.4 2.2E+02 0.0049 23.9 5.5 28 161-189 95-122 (243)
339 PF00072 Response_reg: Respons 23.3 2.5E+02 0.0054 19.1 6.2 38 158-195 56-95 (112)
340 TIGR00441 gmhA phosphoheptose 23.2 94 0.002 23.8 3.0 31 156-186 91-121 (154)
341 TIGR00640 acid_CoA_mut_C methy 23.0 3.3E+02 0.0071 20.4 7.1 44 157-202 67-112 (132)
342 COG0415 PhrB Deoxyribodipyrimi 22.9 1.5E+02 0.0032 27.6 4.6 44 158-203 55-98 (461)
343 TIGR00216 ispH_lytB (E)-4-hydr 22.9 5E+02 0.011 22.4 8.2 25 225-250 99-123 (280)
344 PF13604 AAA_30: AAA domain; P 22.7 89 0.0019 25.1 2.9 34 161-195 36-69 (196)
345 COG1225 Bcp Peroxiredoxin [Pos 21.9 1.8E+02 0.0039 22.7 4.3 32 163-194 56-87 (157)
346 KOG0855 Alkyl hydroperoxide re 21.6 1.9E+02 0.0042 22.9 4.3 37 159-195 112-148 (211)
347 cd02971 PRX_family Peroxiredox 21.5 1.6E+02 0.0034 21.5 4.0 33 160-192 45-77 (140)
348 TIGR02494 PFLE_PFLC glycyl-rad 21.0 1.2E+02 0.0026 25.9 3.6 30 153-182 135-165 (295)
349 cd06533 Glyco_transf_WecG_TagA 20.7 3.6E+02 0.0079 21.0 6.0 27 160-187 35-61 (171)
350 PLN02629 powdery mildew resist 20.6 77 0.0017 28.7 2.3 12 239-251 120-131 (387)
351 PF07788 DUF1626: Protein of u 20.6 2.3E+02 0.0049 18.9 4.0 33 162-194 36-69 (70)
352 PRK00414 gmhA phosphoheptose i 20.5 1.1E+02 0.0024 24.5 3.1 31 156-186 123-153 (192)
353 PLN03063 alpha,alpha-trehalose 20.4 1.2E+02 0.0026 30.3 3.8 45 214-258 666-719 (797)
354 PF06437 ISN1: IMP-specific 5' 20.3 1E+02 0.0023 27.8 3.0 23 75-97 137-161 (408)
355 cd03334 Fab1_TCP TCP-1 like do 20.1 5.3E+02 0.012 21.7 7.3 38 158-195 117-154 (261)
No 1
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-33 Score=215.40 Aligned_cols=183 Identities=61% Similarity=1.005 Sum_probs=174.5
Q ss_pred HHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCC
Q 025042 75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPP 154 (259)
Q Consensus 75 ~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (259)
+..+.+...++||||+|-|++..+.++++++.++.++++..++++.|+|+++|.+.+..++..+.+...++.+++....+
T Consensus 8 e~~~~~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~ 87 (227)
T KOG1615|consen 8 ELAKLWRSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKP 87 (227)
T ss_pred HHHHHHHhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCC
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
++.||+++++..|+++|.+++++||+++..+.+++++|||+..++|++.+.|+.+|.+.|++...|...+..|+++++.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999777999999999999999999999999999999999999
Q ss_pred HHHcCCCeEEEEecCcccHHhhh
Q 025042 235 RKAHAYKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 235 ~~~~g~~~v~~vGDg~ND~~al~ 257 (259)
++.+++..++|||||.||++|..
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~ 190 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMP 190 (227)
T ss_pred HhCCChheeEEecCCccccccCC
Confidence 99666689999999999999864
No 2
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4e-31 Score=248.15 Aligned_cols=228 Identities=21% Similarity=0.244 Sum_probs=151.7
Q ss_pred ccccccccccccccccccccchhh-----hhhhccccceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHh
Q 025042 5 VRSQISPIGAHYKQQHSVFIPKFS-----LKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQL 79 (259)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~ 79 (259)
+++||+|+.+-+--+...+|.-+. -++-. .++|.|.+|||++.+.++.+....+++++++|+++|+++++|.
T Consensus 325 ~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~---a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~ 401 (713)
T COG2217 325 VASYFVPVVLVIAALTFALWPLFGGGDWETALYR---ALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALER 401 (713)
T ss_pred HHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHH---HHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHh
Confidence 467888855434333333342221 11211 2466777777766665555555557999999999999999999
Q ss_pred ccCcCEEEEeCCCcccccch-----------HHHHH-HHhc----Cchh-HHHHHHHHcC-CCCc---HHHHHHHHH---
Q 025042 80 WRTADAVCFDVDSTVCVDEG-----------IDELA-EFCG----AGKA-VAEWTARAMG-GSVP---FEEALAARL--- 135 (259)
Q Consensus 80 ~~~~k~vvFD~DGTLt~~~~-----------~~~l~-~~~~----~~~~-~~~~~~~~~~-~~~~---~~~~~~~~~--- 135 (259)
++++|+++||||||||.++. .+++. ..+. ..++ .+++.+.... +..+ +.+..+.-+
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~~~~~~~~~i~G~Gv~~~ 481 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE 481 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCCCHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCCCCccceeeeccCcEEEE
Confidence 99999999999999988742 12222 1111 1222 2334432221 1111 111111000
Q ss_pred -----------hhcC--C-----CHHHHHHHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeC
Q 025042 136 -----------SLFK--P-----SLSQVQDFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISG 179 (259)
Q Consensus 136 -----------~~~~--~-----~~~~i~~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg 179 (259)
..+. + ..+..+.+.. ...+.+||++++.++.||+.|++++|+||
T Consensus 482 v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTG 561 (713)
T COG2217 482 VDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTG 561 (713)
T ss_pred ECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcC
Confidence 0000 0 0111111111 12569999999999999999999999999
Q ss_pred CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 180 GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 180 ~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
|++..++.+++++|++ +++++.+ |++|.+.+++++++ | +.|+|||||+||+|+|+.
T Consensus 562 Dn~~~A~~iA~~lGId--~v~Aell-------------------PedK~~~V~~l~~~-g-~~VamVGDGINDAPALA~ 617 (713)
T COG2217 562 DNRRTAEAIAKELGID--EVRAELL-------------------PEDKAEIVRELQAE-G-RKVAMVGDGINDAPALAA 617 (713)
T ss_pred CCHHHHHHHHHHcChH--hheccCC-------------------cHHHHHHHHHHHhc-C-CEEEEEeCCchhHHHHhh
Confidence 9999999999999997 8999864 99999999999977 5 799999999999999975
No 3
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.96 E-value=3.3e-30 Score=239.75 Aligned_cols=228 Identities=16% Similarity=0.187 Sum_probs=161.9
Q ss_pred ccccccccccccccccccccchhh---------------hhhhccccceeeeeeeccCccchhhhccCcccccccccCCC
Q 025042 5 VRSQISPIGAHYKQQHSVFIPKFS---------------LKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSEN 69 (259)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~ 69 (259)
+++||+|+++.+.-.+.++|+-.. -++.++ ++|.|.+|||++.|..+.+---+.+-+|++|+
T Consensus 492 ia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~a---isVlviACPCaLgLATPtAvmvatgvgA~nGv 568 (951)
T KOG0207|consen 492 IAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLA---ISVLVIACPCALGLATPTAVMVATGVGATNGV 568 (951)
T ss_pred hhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhh---heEEEEECchhhhcCCceEEEEEechhhhcce
Confidence 589999999988877776665433 244444 68999999999888766555555688999999
Q ss_pred CCCCHHHHHhccCcCEEEEeCCCcccccch-------------HHHHHHH---hc--CchhH-HHHHHHHcCCC------
Q 025042 70 TLPSKEVLQLWRTADAVCFDVDSTVCVDEG-------------IDELAEF---CG--AGKAV-AEWTARAMGGS------ 124 (259)
Q Consensus 70 ~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-------------~~~l~~~---~~--~~~~~-~~~~~~~~~~~------ 124 (259)
|+|+++.+|++.++++|+||||||||.+.. .+++... .. ..+++ .++.+......
T Consensus 569 LIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~ 648 (951)
T KOG0207|consen 569 LIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPE 648 (951)
T ss_pred EEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCcc
Confidence 999999999999999999999999988731 1221111 11 12222 22222211000
Q ss_pred --CcHHHHHHH----------------HHhhcC----CCHHHHHHHHH----------------------hCCCCCCccH
Q 025042 125 --VPFEEALAA----------------RLSLFK----PSLSQVQDFLE----------------------KRPPRLSPGI 160 (259)
Q Consensus 125 --~~~~~~~~~----------------~~~~~~----~~~~~i~~~~~----------------------~~~~~~~p~~ 160 (259)
.++.....+ ...++. ...+.+++... ...+.+||++
T Consensus 649 ~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a 728 (951)
T KOG0207|consen 649 GVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDA 728 (951)
T ss_pred ccceeecccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhH
Confidence 011100000 000000 01122333321 2357999999
Q ss_pred HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042 161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~ 240 (259)
..+++.||++|++++|+|||+..+++.+++++|++ ++|++.+ |++|.+.|++++++ +
T Consensus 729 ~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~-------------------P~~K~~~Ik~lq~~-~- 785 (951)
T KOG0207|consen 729 ALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVL-------------------PEQKAEKIKEIQKN-G- 785 (951)
T ss_pred HHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccC-------------------chhhHHHHHHHHhc-C-
Confidence 99999999999999999999999999999999987 8999864 99999999999998 4
Q ss_pred CeEEEEecCcccHHhhhc
Q 025042 241 KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 241 ~~v~~vGDg~ND~~al~~ 258 (259)
..|+|||||.||.|+|..
T Consensus 786 ~~VaMVGDGINDaPALA~ 803 (951)
T KOG0207|consen 786 GPVAMVGDGINDAPALAQ 803 (951)
T ss_pred CcEEEEeCCCCccHHHHh
Confidence 689999999999999975
No 4
>PLN02954 phosphoserine phosphatase
Probab=99.95 E-value=9.9e-27 Score=193.54 Aligned_cols=187 Identities=80% Similarity=1.295 Sum_probs=160.6
Q ss_pred CCHHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHh
Q 025042 72 PSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK 151 (259)
Q Consensus 72 ~~~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (259)
++..++|.+.++|+|+||+||||++.+++..+.+.++.+.....+...+..+.+++.+.+...+.......+.+.+++..
T Consensus 1 ~~~~~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PLN02954 1 PSKDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEK 80 (224)
T ss_pred ChHHHHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 46789999999999999999999999988888888887777777888888889999998888887776666667777776
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
....++||+.+++++|+++|++++|+|++.+..++.+++.+|++..++|++.+.++.+|.+.|.....+.+.+.+|++.+
T Consensus 81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i 160 (224)
T PLN02954 81 RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAV 160 (224)
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHH
Confidence 55678999999999999999999999999999999999999997546888888888888888876544444567899999
Q ss_pred HHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
+++++++|.++++|||||.||+.|++.
T Consensus 161 ~~~~~~~~~~~~i~iGDs~~Di~aa~~ 187 (224)
T PLN02954 161 QHIKKKHGYKTMVMIGDGATDLEARKP 187 (224)
T ss_pred HHHHHHcCCCceEEEeCCHHHHHhhhc
Confidence 999998777789999999999999764
No 5
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.94 E-value=9.4e-26 Score=185.43 Aligned_cols=174 Identities=36% Similarity=0.504 Sum_probs=154.7
Q ss_pred cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHH-HHHHHHHhCCCCCCcc
Q 025042 81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS-QVQDFLEKRPPRLSPG 159 (259)
Q Consensus 81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~p~ 159 (259)
.+.++++||+||||++.+.++.+....+.+..+..++.+.+.+..++.+.+..+...+.+.+. .++++.++. .+++|+
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~-~~l~~g 81 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF-LRLTPG 81 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc-CcCCcc
Confidence 467899999999999988899999999999999999999999999999999999999987654 455666654 689999
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA 239 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g 239 (259)
+.+++++++++|++++++||+....++++++.+|++ .++++.+..++ |.++|...+.. +..+.|...++++++++|
T Consensus 82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d--~~~an~l~~~d-G~ltG~v~g~~-~~~~~K~~~l~~~~~~~g 157 (212)
T COG0560 82 AEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID--YVVANELEIDD-GKLTGRVVGPI-CDGEGKAKALRELAAELG 157 (212)
T ss_pred HHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc--hheeeEEEEeC-CEEeceeeeee-cCcchHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999998 89999999877 67777666544 556899999999999999
Q ss_pred C--CeEEEEecCcccHHhhhcC
Q 025042 240 Y--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 240 ~--~~v~~vGDg~ND~~al~~v 259 (259)
+ ++++++|||.||+||++.+
T Consensus 158 ~~~~~~~a~gDs~nDlpml~~a 179 (212)
T COG0560 158 IPLEETVAYGDSANDLPMLEAA 179 (212)
T ss_pred CCHHHeEEEcCchhhHHHHHhC
Confidence 8 6999999999999999864
No 6
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.93 E-value=2.7e-24 Score=187.03 Aligned_cols=175 Identities=31% Similarity=0.414 Sum_probs=151.0
Q ss_pred ccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCcc
Q 025042 80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG 159 (259)
Q Consensus 80 ~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~ 159 (259)
+++.++++||+||||+..++++++++.++.+..+..++++++.+++++.+.+..++..+++..+.+.+.+... .+++||
T Consensus 107 ~~~~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~il~~v~~~-l~l~pG 185 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANILQQVREN-LPLMPG 185 (322)
T ss_pred ccCCCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHHHHHHHHh-CCCChh
Confidence 4578999999999999999999999999999888899999999999999999988888887655543333332 568999
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA 239 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g 239 (259)
+.++++.|++.|+++.|+|++....++.+.+++|++ .++++.+.+ .++.++|...++. ..+++|++.++++++++|
T Consensus 186 a~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei-~dg~ltg~v~g~i-v~~k~K~~~L~~la~~lg 261 (322)
T PRK11133 186 LTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEI-MDGKLTGNVLGDI-VDAQYKADTLTRLAQEYE 261 (322)
T ss_pred HHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEE-ECCEEEeEecCcc-CCcccHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999997 888888877 4778877766643 345899999999999999
Q ss_pred C--CeEEEEecCcccHHhhhcC
Q 025042 240 Y--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 240 ~--~~v~~vGDg~ND~~al~~v 259 (259)
+ ++|++||||.||++|++.+
T Consensus 262 i~~~qtIaVGDg~NDl~m~~~A 283 (322)
T PRK11133 262 IPLAQTVAIGDGANDLPMIKAA 283 (322)
T ss_pred CChhhEEEEECCHHHHHHHHHC
Confidence 8 7999999999999999753
No 7
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.93 E-value=2.2e-24 Score=172.75 Aligned_cols=172 Identities=31% Similarity=0.521 Sum_probs=143.8
Q ss_pred EEEEeCCCcccccch-HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHH-HHHhCCCCCCccHH
Q 025042 85 AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQD-FLEKRPPRLSPGID 161 (259)
Q Consensus 85 ~vvFD~DGTLt~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~-~~~~~~~~~~p~~~ 161 (259)
+++||+||||+..++ ...+....+.......+...+..+.+++.+.+......+.+.. +.+.+ ++... ..++|++.
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 79 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQ-VALRPGAR 79 (177)
T ss_pred CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhc-CCcCcCHH
Confidence 379999999999887 4455555555456677888888999999999999988887665 45544 55554 56899999
Q ss_pred HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC-
Q 025042 162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY- 240 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~- 240 (259)
++++.++++|++++++|++....++.+++++|++ .++++.+.++++|.++|.....+.+.+.+|...++++++++|+
T Consensus 80 ~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~ 157 (177)
T TIGR01488 80 ELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKIT 157 (177)
T ss_pred HHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999998 8999999988888888766554456678999999999988776
Q ss_pred -CeEEEEecCcccHHhhhcC
Q 025042 241 -KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 241 -~~v~~vGDg~ND~~al~~v 259 (259)
++++|||||.||++|++.+
T Consensus 158 ~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 158 LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHEEEEeCCHHHHHHHhcC
Confidence 7899999999999999864
No 8
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=99.92 E-value=1.9e-25 Score=209.83 Aligned_cols=198 Identities=16% Similarity=0.211 Sum_probs=138.1
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~ 105 (259)
+++.|++|||+.+...+.+....+.+++++|+++|+++++|.++.++++|||||||||.++. .+.+..
T Consensus 253 iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~ 332 (679)
T PRK01122 253 VALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELAD 332 (679)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHH
Confidence 67789999998777666555566899999999999999999999999999999999998641 122221
Q ss_pred ---HhcCc---hhHHHHHHHHcC--CC------------CcHHHHHHHH------HhhcCCCHH---------------H
Q 025042 106 ---FCGAG---KAVAEWTARAMG--GS------------VPFEEALAAR------LSLFKPSLS---------------Q 144 (259)
Q Consensus 106 ---~~~~~---~~~~~~~~~~~~--~~------------~~~~~~~~~~------~~~~~~~~~---------------~ 144 (259)
..... ..-.++...... +. .+|....+.. ....++..+ .
T Consensus 333 ~a~~~s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~ 412 (679)
T PRK01122 333 AAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAE 412 (679)
T ss_pred HHHHhcCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHH
Confidence 11111 111122211110 00 0110000000 000011111 1
Q ss_pred HH----HHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeec
Q 025042 145 VQ----DFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN 202 (259)
Q Consensus 145 i~----~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~ 202 (259)
++ ++.. ...+++||++++.+++||++|++++|+|||+..+++.+++++|++ ++|++
T Consensus 413 ~~~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~ 490 (679)
T PRK01122 413 LDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAE 490 (679)
T ss_pred HHHHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEcc
Confidence 11 1111 123589999999999999999999999999999999999999997 78887
Q ss_pred ceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 203 QLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 203 ~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
. .|++|.+.+++++++ | +.|+|+|||.||+||++.
T Consensus 491 ~-------------------~PedK~~iV~~lQ~~-G-~~VaMtGDGvNDAPALa~ 525 (679)
T PRK01122 491 A-------------------TPEDKLALIRQEQAE-G-RLVAMTGDGTNDAPALAQ 525 (679)
T ss_pred C-------------------CHHHHHHHHHHHHHc-C-CeEEEECCCcchHHHHHh
Confidence 4 599999999999988 6 789999999999999986
No 9
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=99.92 E-value=2e-25 Score=209.45 Aligned_cols=199 Identities=12% Similarity=0.155 Sum_probs=139.0
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc-h-----------HHHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE-G-----------IDELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~-~-----------~~~l~~ 105 (259)
+++.|+.+||+++.+++.+....+.+++++|+++|+++++|.++.++++|||||||||.++ . .+++..
T Consensus 253 val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~ 332 (673)
T PRK14010 253 IALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVK 332 (673)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHH
Confidence 5666788899999888776666789999999999999999999999999999999999853 1 112221
Q ss_pred H---hcC--chh-HHHHHHHHcCCC----------CcHHHHHHH------HHhhcCCCHHH---------------H---
Q 025042 106 F---CGA--GKA-VAEWTARAMGGS----------VPFEEALAA------RLSLFKPSLSQ---------------V--- 145 (259)
Q Consensus 106 ~---~~~--~~~-~~~~~~~~~~~~----------~~~~~~~~~------~~~~~~~~~~~---------------i--- 145 (259)
. +.. .++ ..++........ .+|...... .....++..+. +
T Consensus 333 ~a~~~~~~s~~P~~~AIv~~a~~~~~~~~~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 333 AAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred HHHHhcCCCCChHHHHHHHHHHHcCCCchhhhcceeccccccceeEEEECCEEEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 1 111 111 112222111000 011000000 00000111111 1
Q ss_pred -HHHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceee
Q 025042 146 -QDFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLF 206 (259)
Q Consensus 146 -~~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~ 206 (259)
+++-. ...+++||++++.+++||+.|++++|+|||+..++..+++++|++ ++|++.
T Consensus 413 ~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A~~--- 487 (673)
T PRK14010 413 VKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVAEC--- 487 (673)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEcCC---
Confidence 11111 124589999999999999999999999999999999999999997 788874
Q ss_pred cCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 207 KSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 207 ~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.|++|.++++.++++ | +.|+|+|||.||+||++..
T Consensus 488 ----------------~PedK~~iV~~lQ~~-G-~~VaMtGDGvNDAPALa~A 522 (673)
T PRK14010 488 ----------------KPEDKINVIREEQAK-G-HIVAMTGDGTNDAPALAEA 522 (673)
T ss_pred ----------------CHHHHHHHHHHHHhC-C-CEEEEECCChhhHHHHHhC
Confidence 599999999999987 6 7899999999999999863
No 10
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=99.91 E-value=1.2e-24 Score=204.18 Aligned_cols=199 Identities=15% Similarity=0.164 Sum_probs=135.9
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~ 105 (259)
+++.|++|||+++...+.+....+.+++++|+++|+++++|.++.++++|||||||||.++. .+++..
T Consensus 254 vallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~ 333 (675)
T TIGR01497 254 VALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLAD 333 (675)
T ss_pred HHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHH
Confidence 66788999997655444433345799999999999999999999999999999999998741 122222
Q ss_pred H---hcC--chh-HHHHHHHHcCCCC-------------cHHHH--HH-----HHHhhcCCCHH---------------H
Q 025042 106 F---CGA--GKA-VAEWTARAMGGSV-------------PFEEA--LA-----ARLSLFKPSLS---------------Q 144 (259)
Q Consensus 106 ~---~~~--~~~-~~~~~~~~~~~~~-------------~~~~~--~~-----~~~~~~~~~~~---------------~ 144 (259)
. ... .++ .+++......... +|... +. ......++..+ .
T Consensus 334 ~aa~~~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~ 413 (675)
T TIGR01497 334 AAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTD 413 (675)
T ss_pred HHHHhcCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHH
Confidence 1 111 111 1122221100000 00000 00 00000011111 1
Q ss_pred H----HHHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeec
Q 025042 145 V----QDFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN 202 (259)
Q Consensus 145 i----~~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~ 202 (259)
+ +++-. ...+.+||++++.+++|+++|++++|+|||+..+++.+++++|++ +++++
T Consensus 414 ~~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~ 491 (675)
T TIGR01497 414 LDQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAE 491 (675)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcC
Confidence 1 11111 124589999999999999999999999999999999999999997 77776
Q ss_pred ceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 203 QLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 203 ~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
. .|++|.+.++.++++ | +.|+|+|||.||+||++.+
T Consensus 492 ~-------------------~PedK~~~v~~lq~~-g-~~VamvGDG~NDapAL~~A 527 (675)
T TIGR01497 492 A-------------------TPEDKIALIRQEQAE-G-KLVAMTGDGTNDAPALAQA 527 (675)
T ss_pred C-------------------CHHHHHHHHHHHHHc-C-CeEEEECCCcchHHHHHhC
Confidence 3 589999999999887 5 6899999999999999863
No 11
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.90 E-value=1.6e-22 Score=167.65 Aligned_cols=178 Identities=31% Similarity=0.472 Sum_probs=141.7
Q ss_pred HHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC-HHHHHHHHHhCCC
Q 025042 76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPP 154 (259)
Q Consensus 76 ~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 154 (259)
+-+.++++++++||+||||++.+++..+....+.+.....+..++..+..++.+.+...+..+.+. .+.+.++... .
T Consensus 7 ~~~~~~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 84 (219)
T TIGR00338 7 LSPLLRSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVREN--L 84 (219)
T ss_pred chhhhccCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHHhc--C
Confidence 345578999999999999999988888887777655555666677777888888877777666543 3344444444 4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
.++||+.++++.|+++|++++|+|++....++.+++.+|++ .+|++.+.++ ++.+++...... ..+++|+..++.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~-~~~~~~~~~~~~-~~~~~k~~~~~~~ 160 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVE-DGKLTGLVEGPI-VDASYKGKTLLIL 160 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEE-CCEEEEEecCcc-cCCcccHHHHHHH
Confidence 68999999999999999999999999999999999999998 7888877774 566666554433 2346799999999
Q ss_pred HHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 235 RKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 235 ~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
++++++ ++|+|||||.||+++++.+
T Consensus 161 ~~~~~~~~~~~i~iGDs~~Di~aa~~a 187 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGANDLSMIKAA 187 (219)
T ss_pred HHHcCCCHHHEEEEECCHHHHHHHHhC
Confidence 999887 7899999999999998753
No 12
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.90 E-value=4.7e-25 Score=205.84 Aligned_cols=198 Identities=18% Similarity=0.245 Sum_probs=134.9
Q ss_pred ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHH
Q 025042 37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELA 104 (259)
Q Consensus 37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~ 104 (259)
.+++.|++|||++++.++.+-...+++++++|+++|+++++|.++++++++||||||||.++. .+++.
T Consensus 231 ~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l 310 (562)
T TIGR01511 231 AVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDRTELL 310 (562)
T ss_pred HHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCHHHHH
Confidence 357788888888888777776777899999999999999999999999999999999998742 11111
Q ss_pred HHh---c--CchhH-HHHHHHHcCCCCc------HHHHHHHHHh-hcC------CCHHHHH-------HHHH--------
Q 025042 105 EFC---G--AGKAV-AEWTARAMGGSVP------FEEALAARLS-LFK------PSLSQVQ-------DFLE-------- 150 (259)
Q Consensus 105 ~~~---~--~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~-~~~------~~~~~i~-------~~~~-------- 150 (259)
..+ . ..++. .++.+.......+ +.+.....+. ... ++...+. +...
T Consensus 311 ~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~~~~~~g~~~~~~ 390 (562)
T TIGR01511 311 ALAAALEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKIDGKAEQGSTSVLV 390 (562)
T ss_pred HHHHHHhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCChhhhCCCEEEEE
Confidence 111 0 11111 2222221110000 0000000000 000 0111110 0000
Q ss_pred ----------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042 151 ----------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP 220 (259)
Q Consensus 151 ----------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~ 220 (259)
...+.++|++.+++++|+++|++++|+||+++..++.+++++|++ +|++.
T Consensus 391 ~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~~~----------------- 450 (562)
T TIGR01511 391 AVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRAEV----------------- 450 (562)
T ss_pred EECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEccC-----------------
Confidence 124589999999999999999999999999999999999999994 56542
Q ss_pred CcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 221 TSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.|++|.+.+++++++ + ++|+|||||.||++|++.
T Consensus 451 --~p~~K~~~v~~l~~~-~-~~v~~VGDg~nD~~al~~ 484 (562)
T TIGR01511 451 --LPDDKAALIKELQEK-G-RVVAMVGDGINDAPALAQ 484 (562)
T ss_pred --ChHHHHHHHHHHHHc-C-CEEEEEeCCCccHHHHhh
Confidence 378999999999886 4 799999999999999975
No 13
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.89 E-value=7.7e-24 Score=206.09 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=138.8
Q ss_pred ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHH-H
Q 025042 37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDE-L 103 (259)
Q Consensus 37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~-l 103 (259)
.+++.|++|||++++.++.+-...+++++++|+++|+++++|.++++++++||||||||.++. ... +
T Consensus 471 a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l 550 (834)
T PRK10671 471 ATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQAL 550 (834)
T ss_pred HHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHHH
Confidence 367889999999998888877777899999999999999999999999999999999988742 011 1
Q ss_pred HHH--hc--CchhH-HHHHHHHcCCCC----cHHHHH-----------------HHHHhhcCCCHHH----HHHHHH---
Q 025042 104 AEF--CG--AGKAV-AEWTARAMGGSV----PFEEAL-----------------AARLSLFKPSLSQ----VQDFLE--- 150 (259)
Q Consensus 104 ~~~--~~--~~~~~-~~~~~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~~----i~~~~~--- 150 (259)
... +. ..++. +++.+....... ++.+.. ...+....-..+. ++++-.
T Consensus 551 ~~a~~~e~~s~hp~a~Ai~~~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~ 630 (834)
T PRK10671 551 RLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGA 630 (834)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCC
Confidence 111 11 11111 222222110000 000000 0000000000011 111111
Q ss_pred ---------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecc
Q 025042 151 ---------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF 215 (259)
Q Consensus 151 ---------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~ 215 (259)
...+.++|++.+.+++|++.|++++++|||++..++.+++++|++ ++|+..
T Consensus 631 ~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~------------ 696 (834)
T PRK10671 631 TPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGV------------ 696 (834)
T ss_pred eEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCC------------
Confidence 124589999999999999999999999999999999999999997 777653
Q ss_pred cCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 216 DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 216 ~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.|++|.+++++++.+ + ++++|||||.||++|++.+
T Consensus 697 -------~p~~K~~~i~~l~~~-~-~~v~~vGDg~nD~~al~~A 731 (834)
T PRK10671 697 -------LPDGKAEAIKRLQSQ-G-RQVAMVGDGINDAPALAQA 731 (834)
T ss_pred -------CHHHHHHHHHHHhhc-C-CEEEEEeCCHHHHHHHHhC
Confidence 378899999999877 5 6999999999999999863
No 14
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=99.88 E-value=3.2e-23 Score=198.78 Aligned_cols=196 Identities=17% Similarity=0.177 Sum_probs=127.7
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~ 105 (259)
+++.|++|||++.+.++.+-.....+++++|+++|+++++|.++++++++||||||||.++. .+++..
T Consensus 391 ~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~ 470 (741)
T PRK11033 391 LTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLA 470 (741)
T ss_pred HHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHH
Confidence 56667777777644333333333688899999999999999999999999999999998741 112211
Q ss_pred Hh---c--CchhH-HHHHHHHcCCCC--cHHHHHH----HHHh-hcC------CCH-------HH----HHHHHH-----
Q 025042 106 FC---G--AGKAV-AEWTARAMGGSV--PFEEALA----ARLS-LFK------PSL-------SQ----VQDFLE----- 150 (259)
Q Consensus 106 ~~---~--~~~~~-~~~~~~~~~~~~--~~~~~~~----~~~~-~~~------~~~-------~~----i~~~~~----- 150 (259)
.. . ..++. +++.+....... ++.+... ..+. ..+ +.+ +. +.++-.
T Consensus 471 ~aa~~e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~ 550 (741)
T PRK11033 471 LAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESAGKTV 550 (741)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhCCCEE
Confidence 11 1 11111 222222111000 0000000 0000 000 000 00 111111
Q ss_pred -------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC
Q 025042 151 -------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA 217 (259)
Q Consensus 151 -------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~ 217 (259)
...+++||++.+.+++|+++|++++|+|||+...++.+++++|++ ++++.
T Consensus 551 v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---~~~~~-------------- 613 (741)
T PRK11033 551 VLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---FRAGL-------------- 613 (741)
T ss_pred EEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---eecCC--------------
Confidence 124589999999999999999999999999999999999999994 44432
Q ss_pred CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 218 NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 218 ~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.|++|.++++++++. ++|+|+|||.||+||++.
T Consensus 614 -----~p~~K~~~v~~l~~~---~~v~mvGDgiNDapAl~~ 646 (741)
T PRK11033 614 -----LPEDKVKAVTELNQH---APLAMVGDGINDAPAMKA 646 (741)
T ss_pred -----CHHHHHHHHHHHhcC---CCEEEEECCHHhHHHHHh
Confidence 478999999999864 589999999999999975
No 15
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.88 E-value=2.8e-21 Score=157.80 Aligned_cols=172 Identities=20% Similarity=0.248 Sum_probs=127.9
Q ss_pred CcCEEEEeCCCcccccch-HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCC-----CHHHHHHHHHhCCCC
Q 025042 82 TADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-----SLSQVQDFLEKRPPR 155 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~ 155 (259)
|+|+++||+||||++.+. +..+...++.+.........+..+..++.+.+......+.. ..+.+.++... ..
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 80 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKE--IS 80 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHh--CC
Confidence 688999999999999654 44455556654333333345667788888776544333321 33445555544 46
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR 235 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~ 235 (259)
++||+.++|+.|+++|++++|+|++....++.+++.+|++ .+|++.+.+++++...+.. .....+.+|.+.+++++
T Consensus 81 ~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~--~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 81 LRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDG--IVRVTFDNKGEAVERLK 156 (201)
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecce--eeEEccccHHHHHHHHH
Confidence 8999999999999999999999999999999999999987 7888777776655554321 11234568999999999
Q ss_pred HHcCC--CeEEEEecCcccHHhhhcC
Q 025042 236 KAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 236 ~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
+++|+ ++++|||||.||++|++.+
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~a 182 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVA 182 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhc
Confidence 98887 7899999999999998764
No 16
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=99.88 E-value=4.3e-23 Score=198.35 Aligned_cols=221 Identities=16% Similarity=0.188 Sum_probs=141.1
Q ss_pred ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-------------HHHH
Q 025042 37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-------------IDEL 103 (259)
Q Consensus 37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-------------~~~l 103 (259)
.+++.|+++||++|++++.+-...+.+++++|+++|+.+++|.++.++++|||||||||.++. .+.+
T Consensus 240 ~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~ 319 (755)
T TIGR01647 240 ALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDV 319 (755)
T ss_pred HHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHH
Confidence 378889999999999998887777899999999999999999999999999999999988741 1111
Q ss_pred HHH---hc---CchhH-HHHHHHHcC-----------CCCcHHHH-------H-----HHHHhhcCCCHHHH--------
Q 025042 104 AEF---CG---AGKAV-AEWTARAMG-----------GSVPFEEA-------L-----AARLSLFKPSLSQV-------- 145 (259)
Q Consensus 104 ~~~---~~---~~~~~-~~~~~~~~~-----------~~~~~~~~-------~-----~~~~~~~~~~~~~i-------- 145 (259)
... .. .+++. .++...... ...+|... . .......+|.++.+
T Consensus 320 l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~ 399 (755)
T TIGR01647 320 LLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKK 399 (755)
T ss_pred HHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcH
Confidence 111 11 11111 111111000 00011000 0 00000001211111
Q ss_pred ----------HHHHH-----------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc
Q 025042 146 ----------QDFLE-----------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL 192 (259)
Q Consensus 146 ----------~~~~~-----------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l 192 (259)
+++.. ...+++||++++.++.|++.|+++.|+|||+..++..+++++
T Consensus 400 ~~~~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l 479 (755)
T TIGR01647 400 EIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL 479 (755)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 11110 013589999999999999999999999999999999999999
Q ss_pred CCCCCcEeecceeecC------CCc---eecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 193 GIPPENIFANQLLFKS------SGE---FLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 193 gi~~~~~~~~~l~~~~------~~~---~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
|+....+-++.+.... ++. +...........|++|.++++.++++ | +.|+|+|||.||+||++..
T Consensus 480 GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G-~~VamvGDGvNDapAL~~A 553 (755)
T TIGR01647 480 GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-G-HLVGMTGDGVNDAPALKKA 553 (755)
T ss_pred CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-C-CEEEEEcCCcccHHHHHhC
Confidence 9963111111110000 000 00000112335699999999999987 6 7999999999999999863
No 17
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=99.88 E-value=1.4e-23 Score=204.39 Aligned_cols=220 Identities=14% Similarity=0.132 Sum_probs=139.4
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~ 105 (259)
++++|+++||++|++++......+.+++++|+++|+.+++|.++.++++|||||||||.++. .+.+..
T Consensus 326 lsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~ 405 (902)
T PRK10517 326 LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLH 405 (902)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHH
Confidence 67889999999999998887777889999999999999999999999999999999988742 111211
Q ss_pred Hhc--------CchhH-HHHHH------------HHcC-CCCcH-------------------------HHHHHH-----
Q 025042 106 FCG--------AGKAV-AEWTA------------RAMG-GSVPF-------------------------EEALAA----- 133 (259)
Q Consensus 106 ~~~--------~~~~~-~~~~~------------~~~~-~~~~~-------------------------~~~~~~----- 133 (259)
... .++.. .++.. .+.. .+.+| .+.+..
T Consensus 406 ~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~ 485 (902)
T PRK10517 406 SAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQV 485 (902)
T ss_pred HHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhh
Confidence 100 01110 00000 0000 00000 000000
Q ss_pred -------------------HHhhc--CCCH------H-------H----HH---HHHH--hCCCCCCccHHHHHHHHHHC
Q 025042 134 -------------------RLSLF--KPSL------S-------Q----VQ---DFLE--KRPPRLSPGIDELVKKLKAN 170 (259)
Q Consensus 134 -------------------~~~~~--~~~~------~-------~----i~---~~~~--~~~~~~~p~~~e~l~~Lk~~ 170 (259)
....+ .+.+ . . .+ .++. ...+++||++++.++.|++.
T Consensus 486 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~a 565 (902)
T PRK10517 486 RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKAS 565 (902)
T ss_pred hcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHC
Confidence 00000 0000 0 0 00 0000 12468999999999999999
Q ss_pred CCcEEEEeCCccccHHHHHHHcCCCCCcEee-cceeecCCCce---ecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEE
Q 025042 171 NKNVYLISGGFRHMINPIASVLGIPPENIFA-NQLLFKSSGEF---LGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMI 246 (259)
Q Consensus 171 g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~-~~l~~~~~~~~---~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~v 246 (259)
|+++.|+|||+..++..+++++|++.+.+.. ..+..-+++.+ ...........|++|.++++.++++ | +.|+|+
T Consensus 566 GI~v~miTGD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~-G-~vVam~ 643 (902)
T PRK10517 566 GVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-G-HVVGFM 643 (902)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHC-C-CEEEEE
Confidence 9999999999999999999999996332221 11110000000 0000112235699999999999987 7 799999
Q ss_pred ecCcccHHhhhcC
Q 025042 247 GDGATDLEVSIFI 259 (259)
Q Consensus 247 GDg~ND~~al~~v 259 (259)
|||.||+||++..
T Consensus 644 GDGvNDaPALk~A 656 (902)
T PRK10517 644 GDGINDAPALRAA 656 (902)
T ss_pred CCCcchHHHHHhC
Confidence 9999999999863
No 18
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=99.87 E-value=1.2e-22 Score=198.18 Aligned_cols=220 Identities=15% Similarity=0.181 Sum_probs=138.4
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH------------HHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI------------DELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~------------~~l~~ 105 (259)
++++|+++||++|++++.+-...+.+++++|+++|+..++|.++.++++|||||||||.+++. +.+..
T Consensus 324 isl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~ 403 (903)
T PRK15122 324 LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQ 403 (903)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHH
Confidence 678899999999999988766667889999999999999999999999999999999887411 11221
Q ss_pred Hh---c-----CchhH-HHHHHHHcC-------------CCCcH-------------------------HHHHHHHHhhc
Q 025042 106 FC---G-----AGKAV-AEWTARAMG-------------GSVPF-------------------------EEALAARLSLF 138 (259)
Q Consensus 106 ~~---~-----~~~~~-~~~~~~~~~-------------~~~~~-------------------------~~~~~~~~~~~ 138 (259)
.. . .+++. .++...... .+.+| .+.+.......
T Consensus 404 ~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~ 483 (903)
T PRK15122 404 LAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHV 483 (903)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhh
Confidence 11 0 01111 111110000 00000 00000000000
Q ss_pred --CC-----C---HHHH----HHH---------------------------HH---------hCCCCCCccHHHHHHHHH
Q 025042 139 --KP-----S---LSQV----QDF---------------------------LE---------KRPPRLSPGIDELVKKLK 168 (259)
Q Consensus 139 --~~-----~---~~~i----~~~---------------------------~~---------~~~~~~~p~~~e~l~~Lk 168 (259)
.+ . ++.+ +++ .+ ...+++||++++.++.|+
T Consensus 484 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~ 563 (903)
T PRK15122 484 RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALR 563 (903)
T ss_pred hcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHH
Confidence 00 0 0000 000 00 124589999999999999
Q ss_pred HCCCcEEEEeCCccccHHHHHHHcCCCCCcEe-ecceeecCCCce---ecccCCCCCcCCCChHHHHHHHHHHcCCCeEE
Q 025042 169 ANNKNVYLISGGFRHMINPIASVLGIPPENIF-ANQLLFKSSGEF---LGFDANEPTSRSGGKAAAVQQIRKAHAYKVLA 244 (259)
Q Consensus 169 ~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~-~~~l~~~~~~~~---~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~ 244 (259)
+.|+++.|+|||+..++.++++++|+..+++. +..+..-+++.+ ...........|++|..+++.++++ | +.|+
T Consensus 564 ~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~-G-~vVa 641 (903)
T PRK15122 564 ENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN-G-HTVG 641 (903)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhC-C-CEEE
Confidence 99999999999999999999999999632211 111100000000 0000112235699999999999987 7 7999
Q ss_pred EEecCcccHHhhhcC
Q 025042 245 MIGDGATDLEVSIFI 259 (259)
Q Consensus 245 ~vGDg~ND~~al~~v 259 (259)
|+|||.||+||++..
T Consensus 642 mtGDGvNDaPALk~A 656 (903)
T PRK15122 642 FLGDGINDAPALRDA 656 (903)
T ss_pred EECCCchhHHHHHhC
Confidence 999999999999863
No 19
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=99.87 E-value=2.3e-22 Score=195.79 Aligned_cols=220 Identities=16% Similarity=0.151 Sum_probs=139.7
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE 105 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~ 105 (259)
++++|+++||++|++++.+....+.+++++|+++|+.+++|.++.++++|||||||||.++. .+.+..
T Consensus 291 l~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~ 370 (867)
T TIGR01524 291 LAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLK 370 (867)
T ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHH
Confidence 67889999999999998887777889999999999999999999999999999999988742 122221
Q ss_pred Hhc--------CchhH-HHHHHHHcC-------------CCCcH-------------------------HHHHHHHHhh-
Q 025042 106 FCG--------AGKAV-AEWTARAMG-------------GSVPF-------------------------EEALAARLSL- 137 (259)
Q Consensus 106 ~~~--------~~~~~-~~~~~~~~~-------------~~~~~-------------------------~~~~~~~~~~- 137 (259)
.+. .+++. .++...... ...+| .+.+......
T Consensus 371 ~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~ 450 (867)
T TIGR01524 371 MAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHK 450 (867)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhh
Confidence 110 01111 111110000 00000 0000000000
Q ss_pred -cCC-----C---HHHHH----H--------------------------------HHH--hCCCCCCccHHHHHHHHHHC
Q 025042 138 -FKP-----S---LSQVQ----D--------------------------------FLE--KRPPRLSPGIDELVKKLKAN 170 (259)
Q Consensus 138 -~~~-----~---~~~i~----~--------------------------------~~~--~~~~~~~p~~~e~l~~Lk~~ 170 (259)
..+ . .+.+. + ++. ...+++||++++.+++|++.
T Consensus 451 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a 530 (867)
T TIGR01524 451 RFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN 530 (867)
T ss_pred hcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC
Confidence 000 0 00000 0 000 01458999999999999999
Q ss_pred CCcEEEEeCCccccHHHHHHHcCCCCCcEee-cceeecCCCcee---cccCCCCCcCCCChHHHHHHHHHHcCCCeEEEE
Q 025042 171 NKNVYLISGGFRHMINPIASVLGIPPENIFA-NQLLFKSSGEFL---GFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMI 246 (259)
Q Consensus 171 g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~-~~l~~~~~~~~~---g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~v 246 (259)
|+++.|+|||+..++..+++++|+..+++.. ..+..-.+..+. ..........|++|.++++.++++ | +.|+|+
T Consensus 531 GI~vvmiTGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G-~vVam~ 608 (867)
T TIGR01524 531 GINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKA-G-HTVGFL 608 (867)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhC-C-CEEEEE
Confidence 9999999999999999999999996322221 111100000000 000112235699999999999987 6 799999
Q ss_pred ecCcccHHhhhcC
Q 025042 247 GDGATDLEVSIFI 259 (259)
Q Consensus 247 GDg~ND~~al~~v 259 (259)
|||.||+||++.+
T Consensus 609 GDGvNDapALk~A 621 (867)
T TIGR01524 609 GDGINDAPALRKA 621 (867)
T ss_pred CCCcccHHHHHhC
Confidence 9999999999863
No 20
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.86 E-value=3.4e-22 Score=185.87 Aligned_cols=198 Identities=18% Similarity=0.163 Sum_probs=138.3
Q ss_pred ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH------HH-HHHHhc-
Q 025042 37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI------DE-LAEFCG- 108 (259)
Q Consensus 37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~------~~-l~~~~~- 108 (259)
.+++.+++|||++++.++.+....+.+++++|+++|+++++|.+++++++|||||||||.++.. .+ +.....
T Consensus 200 ~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~l~~a~~~ 279 (536)
T TIGR01512 200 ALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAA 279 (536)
T ss_pred HHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHHHHHHHHHHH
Confidence 3678889999999998888777778999999999999999999999999999999999987521 11 111111
Q ss_pred ---CchhH-HHHHHHHcCCCCcHHHH---HHHHHhh-cC------CCHHHHH-----HHH----------------H--h
Q 025042 109 ---AGKAV-AEWTARAMGGSVPFEEA---LAARLSL-FK------PSLSQVQ-----DFL----------------E--K 151 (259)
Q Consensus 109 ---~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~-~~------~~~~~i~-----~~~----------------~--~ 151 (259)
..++. .++.+...... ++.+. ....+.. .+ ++.+.+. .+. . .
T Consensus 280 e~~~~hp~~~Ai~~~~~~~~-~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~i~ 358 (536)
T TIGR01512 280 EQASSHPLARAIVDYARKRE-NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYIL 358 (536)
T ss_pred hccCCCcHHHHHHHHHHhcC-CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCcchhhCCCeEEEEEECCEEEEEEE
Confidence 11111 22222111000 00000 0000000 00 1111110 000 0 1
Q ss_pred CCCCCCccHHHHHHHHHHCCC-cEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042 152 RPPRLSPGIDELVKKLKANNK-NVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA 230 (259)
Q Consensus 152 ~~~~~~p~~~e~l~~Lk~~g~-~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~ 230 (259)
..+.++||+.+++++|+++|+ +++++||+++..++.+++++|++ ++|+.. .|++|.+.
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~-------------------~p~~K~~~ 417 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAEL-------------------LPEDKLEI 417 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhcc-------------------CcHHHHHH
Confidence 245899999999999999999 99999999999999999999997 677653 37899999
Q ss_pred HHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 231 VQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 231 v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
+++++++ + ++++|+|||.||++|++.
T Consensus 418 i~~l~~~-~-~~v~~vGDg~nD~~al~~ 443 (536)
T TIGR01512 418 VKELREK-Y-GPVAMVGDGINDAPALAA 443 (536)
T ss_pred HHHHHhc-C-CEEEEEeCCHHHHHHHHh
Confidence 9999887 4 799999999999999985
No 21
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.86 E-value=1.2e-20 Score=154.41 Aligned_cols=159 Identities=18% Similarity=0.296 Sum_probs=127.0
Q ss_pred CEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--C-CHHHHHHHHHhCCCCCCccH
Q 025042 84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPGI 160 (259)
Q Consensus 84 k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~p~~ 160 (259)
.+++||+||||++. .|..+....+..... ....+...+.+++..+...++ + ..+.+++++.. .+++||+
T Consensus 2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~--i~l~pga 73 (203)
T TIGR02137 2 EIACLDLEGVLVPE-IWIAFAEKTGIDALK-----ATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIAT--LKPLEGA 73 (203)
T ss_pred eEEEEeCCcccHHH-HHHHHHHHcCCcHHH-----HHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHh--CCCCccH
Confidence 46999999999975 577777766643321 223566788999988887774 3 45667777765 4789999
Q ss_pred HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042 161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~ 240 (259)
.++++++++++ +++|+||+....++++++++|++ ++|++.+.++++|.++|... ..+.+|...++.+++. |
T Consensus 74 ~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~----~~~~~K~~~l~~l~~~-~- 144 (203)
T TIGR02137 74 VEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQL----RQKDPKRQSVIAFKSL-Y- 144 (203)
T ss_pred HHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeee----cCcchHHHHHHHHHhh-C-
Confidence 99999999975 99999999999999999999998 89999888865577777643 2456899999999654 5
Q ss_pred CeEEEEecCcccHHhhhcC
Q 025042 241 KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 241 ~~v~~vGDg~ND~~al~~v 259 (259)
.+++|||||.||++|++.+
T Consensus 145 ~~~v~vGDs~nDl~ml~~A 163 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEA 163 (203)
T ss_pred CCEEEEeCCHHHHHHHHhC
Confidence 5899999999999999864
No 22
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.85 E-value=6.2e-20 Score=152.30 Aligned_cols=171 Identities=21% Similarity=0.347 Sum_probs=128.7
Q ss_pred cCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCCccHH
Q 025042 83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGID 161 (259)
Q Consensus 83 ~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~p~~~ 161 (259)
-++++||+||||++.+....+.+.++. .....+.++++.+++++.+.+...+..+.... +++.+++... ..++||+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~pG~~ 80 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNIIAIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLET-AEIREGFH 80 (219)
T ss_pred CcEEEEcCCCCCCcchhhHHHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhC-CCcCcCHH
Confidence 348999999999998876654444433 34567788888999999999999998887553 5555655443 57999999
Q ss_pred HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCC----cCCCChHHHHHHHHHH
Q 025042 162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPT----SRSGGKAAAVQQIRKA 237 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~----~~~~~K~~~v~~l~~~ 237 (259)
+++++|+++|++++|+|++....++.+++++ +..+.++++...++.++....++.+.+. ..+..|..+++++...
T Consensus 81 e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~ 159 (219)
T PRK09552 81 EFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDT 159 (219)
T ss_pred HHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccC
Confidence 9999999999999999999999999999998 7644577777666544433333332211 0124588888887655
Q ss_pred cCCCeEEEEecCcccHHhhhc
Q 025042 238 HAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 238 ~g~~~v~~vGDg~ND~~al~~ 258 (259)
. .+++|||||.||++|++.
T Consensus 160 ~--~~~i~iGDs~~Di~aa~~ 178 (219)
T PRK09552 160 N--DFHIVIGDSITDLEAAKQ 178 (219)
T ss_pred C--CCEEEEeCCHHHHHHHHH
Confidence 3 689999999999999875
No 23
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.85 E-value=7.5e-22 Score=184.52 Aligned_cols=199 Identities=17% Similarity=0.214 Sum_probs=139.0
Q ss_pred ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch--------------HHH
Q 025042 37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG--------------IDE 102 (259)
Q Consensus 37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~--------------~~~ 102 (259)
.+++.+++|||+++++++.+....+.+++++|+++|+++++|.++.++++|||||||||.++. .++
T Consensus 200 ~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~ 279 (556)
T TIGR01525 200 ALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEE 279 (556)
T ss_pred HHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHH
Confidence 467888999999999888888888899999999999999999999999999999999988631 122
Q ss_pred HHHHhc-----CchhH-HHHHHHHcCCCCc------HHHHHHHHHhh-cCC-------CHH--------------HHHHH
Q 025042 103 LAEFCG-----AGKAV-AEWTARAMGGSVP------FEEALAARLSL-FKP-------SLS--------------QVQDF 148 (259)
Q Consensus 103 l~~~~~-----~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~-~~~-------~~~--------------~i~~~ 148 (259)
+...+. ..++. .++.........+ +.+........ .++ +.+ .+..+
T Consensus 280 ~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 359 (556)
T TIGR01525 280 LLALAAALEQSSSHPLARAIVRYAKKRGLELPKQEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEG 359 (556)
T ss_pred HHHHHHHHhccCCChHHHHHHHHHHhcCCCcccccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHH
Confidence 221111 11111 2222211100000 00000000000 000 001 01111
Q ss_pred HH------------------hCCCCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCC
Q 025042 149 LE------------------KRPPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSS 209 (259)
Q Consensus 149 ~~------------------~~~~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~ 209 (259)
-. ...+.++||+.+++++|+++| +++.++||+++..++.+++++|++ ++|+..
T Consensus 360 ~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~------ 431 (556)
T TIGR01525 360 ESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAEL------ 431 (556)
T ss_pred hhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccC------
Confidence 11 113589999999999999999 999999999999999999999997 777753
Q ss_pred CceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 210 GEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 210 ~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.|++|.+.++++++. + ++|+|+|||.||++|++.
T Consensus 432 -------------~p~~K~~~v~~l~~~-~-~~v~~vGDg~nD~~al~~ 465 (556)
T TIGR01525 432 -------------LPEDKLAIVKELQEE-G-GVVAMVGDGINDAPALAA 465 (556)
T ss_pred -------------CHHHHHHHHHHHHHc-C-CEEEEEECChhHHHHHhh
Confidence 378999999999876 4 699999999999999975
No 24
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=99.84 E-value=5.2e-21 Score=188.13 Aligned_cols=105 Identities=21% Similarity=0.212 Sum_probs=76.8
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Ee-ecceeecCCCce---ecccCCCCCcCCCC
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF-ANQLLFKSSGEF---LGFDANEPTSRSGG 226 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~-~~~l~~~~~~~~---~g~~~~~~~~~~~~ 226 (259)
.+++||++++.++.|++.|++++|+|||+..++..+++++|+...+ +. +..+..-.++.+ ...........|++
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 4589999999999999999999999999999999999999996311 11 111100000000 00001112356999
Q ss_pred hHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 227 KAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 227 K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
|.++++.++++ | +.|+|+|||.||+||++..
T Consensus 657 K~~iV~~lq~~-g-~vVam~GDGvNDapALk~A 687 (941)
T TIGR01517 657 KQLLVLMLKDM-G-EVVAVTGDGTNDAPALKLA 687 (941)
T ss_pred HHHHHHHHHHC-C-CEEEEECCCCchHHHHHhC
Confidence 99999999987 6 6999999999999999863
No 25
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.84 E-value=1.8e-19 Score=149.02 Aligned_cols=167 Identities=17% Similarity=0.317 Sum_probs=129.3
Q ss_pred EEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCCccHHHHH
Q 025042 86 VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGIDELV 164 (259)
Q Consensus 86 vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~p~~~e~l 164 (259)
++||+|||||..++...+.+.+.. +....+...++.+++++.+.+..++..+.... +.+.+++.. ...++||+.+++
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~l~pg~~e~l 79 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLE-TAEIREGFREFV 79 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHh-cCcccccHHHHH
Confidence 799999999999987766655443 45567777888889999999998998887653 567777655 368999999999
Q ss_pred HHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC-----CcCCCChHHHHHHHHHHcC
Q 025042 165 KKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP-----TSRSGGKAAAVQQIRKAHA 239 (259)
Q Consensus 165 ~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~-----~~~~~~K~~~v~~l~~~~g 239 (259)
+.|+++|++++|+|++....++.+++.++.. +.++++.+.+++++....++.+.+ .| +..|..+++++....
T Consensus 80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~c-g~~K~~~l~~~~~~~- 156 (214)
T TIGR03333 80 AFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQC-GCCKPSLIRKLSEPN- 156 (214)
T ss_pred HHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCC-CCCHHHHHHHHhhcC-
Confidence 9999999999999999999999999987543 367787777754433222222221 12 457999999987653
Q ss_pred CCeEEEEecCcccHHhhhc
Q 025042 240 YKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 240 ~~~v~~vGDg~ND~~al~~ 258 (259)
++++|||||.||++|++.
T Consensus 157 -~~~i~iGDg~~D~~~a~~ 174 (214)
T TIGR03333 157 -DYHIVIGDSVTDVEAAKQ 174 (214)
T ss_pred -CcEEEEeCCHHHHHHHHh
Confidence 689999999999999875
No 26
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=99.82 E-value=1.9e-20 Score=183.21 Aligned_cols=105 Identities=23% Similarity=0.296 Sum_probs=75.8
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCC--cE-eecceeecCCCce---ecccCCCCCcCCCC
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE--NI-FANQLLFKSSGEF---LGFDANEPTSRSGG 226 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~--~~-~~~~l~~~~~~~~---~g~~~~~~~~~~~~ 226 (259)
.+++||+++++++.|++.|+++.|+|||+..++..+++++|+... .+ -+..+..-++..+ ...........|++
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 358999999999999999999999999999999999999999621 01 0111100000000 00001112246899
Q ss_pred hHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 227 KAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 227 K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
|..+++.+++. | +.|+|+|||.||+||++..
T Consensus 606 K~~iv~~lq~~-g-~~v~mvGDGvND~pAl~~A 636 (884)
T TIGR01522 606 KMKIVKALQKR-G-DVVAMTGDGVNDAPALKLA 636 (884)
T ss_pred HHHHHHHHHHC-C-CEEEEECCCcccHHHHHhC
Confidence 99999999887 6 7999999999999999863
No 27
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.82 E-value=1.5e-18 Score=140.03 Aligned_cols=170 Identities=18% Similarity=0.308 Sum_probs=122.9
Q ss_pred EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCC--CCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHHH
Q 025042 85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGG--SVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE 162 (259)
Q Consensus 85 ~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~e 162 (259)
+++||+||||++.+....+.+.++.. ....+...+..+ ..++.+.+...+.......+.+.+++.. ..++|++.+
T Consensus 3 ~iiFD~dgTL~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~ 79 (188)
T TIGR01489 3 VVVSDFDGTITLNDSDDWITDKFGPP-EANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKS--APIDPGFKE 79 (188)
T ss_pred EEEEeCCCcccCCCchHHHHHhcCcc-hhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHh--CCCCccHHH
Confidence 68999999999988777777766532 333444444332 3344455444444333345556666655 478999999
Q ss_pred HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCC--CcEeecceeecCCCceecccCCC----CCcCCCChHHHHHHHHH
Q 025042 163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPP--ENIFANQLLFKSSGEFLGFDANE----PTSRSGGKAAAVQQIRK 236 (259)
Q Consensus 163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~--~~~~~~~l~~~~~~~~~g~~~~~----~~~~~~~K~~~v~~l~~ 236 (259)
+++.|+++|++++++|++....++.+++++|+.. +.++++...++.+|.+.+..... ....+..|.+.++++++
T Consensus 80 ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~ 159 (188)
T TIGR01489 80 FIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSE 159 (188)
T ss_pred HHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999862 24566666677777777655442 22234579999999988
Q ss_pred HcCCCeEEEEecCcccHHhhhc
Q 025042 237 AHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 237 ~~g~~~v~~vGDg~ND~~al~~ 258 (259)
++. ++++|||||.||++|++.
T Consensus 160 ~~~-~~~i~iGD~~~D~~aa~~ 180 (188)
T TIGR01489 160 PKY-QHIIYIGDGVTDVCPAKL 180 (188)
T ss_pred hcC-ceEEEECCCcchhchHhc
Confidence 732 799999999999999875
No 28
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.81 E-value=6.5e-19 Score=144.14 Aligned_cols=172 Identities=19% Similarity=0.276 Sum_probs=120.4
Q ss_pred EEEEeCCCcccccchHHHHHHHh-cCchhH-----H---HHHHHHcCCCCcHHHHHHHHH-hhcCC-CHHHHH----HHH
Q 025042 85 AVCFDVDSTVCVDEGIDELAEFC-GAGKAV-----A---EWTARAMGGSVPFEEALAARL-SLFKP-SLSQVQ----DFL 149 (259)
Q Consensus 85 ~vvFD~DGTLt~~~~~~~l~~~~-~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~----~~~ 149 (259)
+++||+||||+++++...+.... ..+... . .....+.....+..+...... ..+.+ +.+.+. ++.
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 80 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV 80 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 37999999999988765555432 222110 0 111112221222233332222 23343 333333 333
Q ss_pred Hh-CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChH
Q 025042 150 EK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKA 228 (259)
Q Consensus 150 ~~-~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~ 228 (259)
.. ....++|++.++++.++++|++++++|++....++.+++++|++ +++++.+.++++|.++|...+ +.+.+++|.
T Consensus 81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~-~~~~g~~K~ 157 (202)
T TIGR01490 81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDG-NNCKGEGKV 157 (202)
T ss_pred HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccC-CCCCChHHH
Confidence 32 23468999999999999999999999999999999999999997 889988887778888887654 335678899
Q ss_pred HHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 229 AAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 229 ~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
..++++.+++++ ++++++|||.+|+||++.+
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a 190 (202)
T TIGR01490 158 HALAELLAEEQIDLKDSYAYGDSISDLPLLSLV 190 (202)
T ss_pred HHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhC
Confidence 999999998887 6899999999999999864
No 29
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.81 E-value=1.2e-18 Score=142.82 Aligned_cols=159 Identities=21% Similarity=0.355 Sum_probs=122.1
Q ss_pred cCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHhCCCCCCcc
Q 025042 83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK---PSLSQVQDFLEKRPPRLSPG 159 (259)
Q Consensus 83 ~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~p~ 159 (259)
+++++||+||||+.. .+..+.+.++..+. . .+..+..++.+.+..++..+. -..+.+...... ..++||
T Consensus 1 ~~~v~FD~DGTL~~~-~~~~~~~~~g~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~--~~~~pg 72 (205)
T PRK13582 1 MEIVCLDLEGVLVPE-IWIAFAEKTGIPEL-R----ATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIAT--LDPLPG 72 (205)
T ss_pred CeEEEEeCCCCChhh-HHHHHHHHcCChHH-H----HHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHh--CCCCCC
Confidence 578999999999964 55666666664332 1 123455677777777776654 234556666665 468999
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA 239 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g 239 (259)
+.++++.|+++ ++++++|++....++.+++++|++ .+|++.+.+++++.+.+... ..|.+|...++.+... +
T Consensus 73 ~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~~----~~p~~k~~~l~~~~~~-~ 144 (205)
T PRK13582 73 AVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYDL----RQPDGKRQAVKALKSL-G 144 (205)
T ss_pred HHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc--hhhcceEEECCCCeEECccc----cccchHHHHHHHHHHh-C
Confidence 99999999999 999999999999999999999997 78888887777777766552 2367888898888765 4
Q ss_pred CCeEEEEecCcccHHhhhc
Q 025042 240 YKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 240 ~~~v~~vGDg~ND~~al~~ 258 (259)
.+++|||||.||++|++.
T Consensus 145 -~~~v~iGDs~~D~~~~~a 162 (205)
T PRK13582 145 -YRVIAAGDSYNDTTMLGE 162 (205)
T ss_pred -CeEEEEeCCHHHHHHHHh
Confidence 799999999999999865
No 30
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.81 E-value=2.2e-20 Score=182.61 Aligned_cols=220 Identities=20% Similarity=0.288 Sum_probs=143.3
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-------H------H---
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-------I------D--- 101 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-------~------~--- 101 (259)
++++|+.+|||+|++++..-...+.+.+++++++++-.+.|.+++++.+|+|||||||.+++ . +
T Consensus 303 v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~ 382 (917)
T COG0474 303 LALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKD 382 (917)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccc
Confidence 68899999999999999988888999999999999999999999999999999999988632 0 0
Q ss_pred --------HHHH---Hhc-----------CchhH-HHHHHHHcC-----------------CCCcH--------------
Q 025042 102 --------ELAE---FCG-----------AGKAV-AEWTARAMG-----------------GSVPF-------------- 127 (259)
Q Consensus 102 --------~l~~---~~~-----------~~~~~-~~~~~~~~~-----------------~~~~~-------------- 127 (259)
.+.. .+. .+.+. .++...... .+.+|
T Consensus 383 ~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~ 462 (917)
T COG0474 383 LKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD 462 (917)
T ss_pred cccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcC
Confidence 0111 111 01100 011110000 00011
Q ss_pred -----------HHHHHHHHhh---------------------c------------C---CCH-----HHHHH---HHH--
Q 025042 128 -----------EEALAARLSL---------------------F------------K---PSL-----SQVQD---FLE-- 150 (259)
Q Consensus 128 -----------~~~~~~~~~~---------------------~------------~---~~~-----~~i~~---~~~-- 150 (259)
.+.+..+... + + ... +..+. +..
T Consensus 463 ~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~ 542 (917)
T COG0474 463 EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLT 542 (917)
T ss_pred CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhh
Confidence 0111100000 0 0 000 00000 110
Q ss_pred hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc----Ee-ecceeecCCCc---eecccCCCCCc
Q 025042 151 KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN----IF-ANQLLFKSSGE---FLGFDANEPTS 222 (259)
Q Consensus 151 ~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~----~~-~~~l~~~~~~~---~~g~~~~~~~~ 222 (259)
...+++|+++++.++.|+++|+++.|+|||+..++..+++++|+..+. +. +..+..-.+.. ...........
T Consensus 543 g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv 622 (917)
T COG0474 543 GIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARV 622 (917)
T ss_pred hccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc
Confidence 125699999999999999999999999999999999999999986432 11 22221111111 11111233456
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.|++|..+++.|++. | +.|+|.|||.||+||++.+
T Consensus 623 sP~qK~~IV~~lq~~-g-~vVamtGDGvNDapALk~A 657 (917)
T COG0474 623 SPEQKARIVEALQKS-G-HVVAMTGDGVNDAPALKAA 657 (917)
T ss_pred CHHHHHHHHHHHHhC-C-CEEEEeCCCchhHHHHHhc
Confidence 799999999999998 7 7999999999999999863
No 31
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=99.80 E-value=2e-20 Score=173.08 Aligned_cols=196 Identities=19% Similarity=0.194 Sum_probs=134.4
Q ss_pred ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH-HHHH--H-HhcCchh
Q 025042 37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI-DELA--E-FCGAGKA 112 (259)
Q Consensus 37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~-~~l~--~-~~~~~~~ 112 (259)
.+++.+.+||+++++.++.+-.....+++++|+++|+++.+|.+++++++|||||||||.++.. ..+. . ....+++
T Consensus 184 ~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~s~hp 263 (499)
T TIGR01494 184 ALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGGEYLSGHP 263 (499)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCCCcCCCCh
Confidence 3678888999999988877777778999999999999999999999999999999999987521 0000 0 0011111
Q ss_pred H-HHHHHHHcCC---CCcHHHHHHHH--------HhhcCCCHHHH-----------HHHHH------------------h
Q 025042 113 V-AEWTARAMGG---SVPFEEALAAR--------LSLFKPSLSQV-----------QDFLE------------------K 151 (259)
Q Consensus 113 ~-~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~i-----------~~~~~------------------~ 151 (259)
. .++.+..... ..++....... -....++.+.+ .++.. .
T Consensus 264 ~~~ai~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~ 343 (499)
T TIGR01494 264 DERALVKSAKWKILNVFEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLG 343 (499)
T ss_pred HHHHHHHHhhhcCcceeccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEE
Confidence 1 1121111100 00111000000 00011222111 11111 1
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
..+.++|++.+++++|++.|++++|+|||+..++..+++++|+ ++. ..|++|.+.+
T Consensus 344 l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~-------------------~~p~~K~~~v 399 (499)
T TIGR01494 344 LEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FAR-------------------VTPEEKAALV 399 (499)
T ss_pred ecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eec-------------------cCHHHHHHHH
Confidence 2368999999999999999999999999999999999999987 222 3589999999
Q ss_pred HHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
++++++ | ..++|+|||.||+||++.
T Consensus 400 ~~l~~~-g-~~v~~vGDg~nD~~al~~ 424 (499)
T TIGR01494 400 EALQKK-G-RVVAMTGDGVNDAPALKK 424 (499)
T ss_pred HHHHHC-C-CEEEEECCChhhHHHHHh
Confidence 999877 5 689999999999999875
No 32
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=99.78 E-value=7.4e-19 Score=163.03 Aligned_cols=98 Identities=21% Similarity=0.285 Sum_probs=78.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC---------------
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA--------------- 217 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~--------------- 217 (259)
.+++||++++.++.+++.|+++.|+|||+..++.++++++|+..++ +.+ ....++|...
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~---ed~---~~~~~TG~efD~ls~~~~~~~~~~~ 655 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED---EDV---SSMALTGSEFDDLSDEELDDAVRRV 655 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC---ccc---cccccchhhhhcCCHHHHHHHhhcc
Confidence 3589999999999999999999999999999999999999985211 000 1112233222
Q ss_pred -CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 218 -NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 218 -~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
....+.|.+|.++++.|++. | +-|+|-|||+||+||||.
T Consensus 656 ~vFaR~~P~HK~kIVeaLq~~-g-eivAMTGDGVNDApALK~ 695 (972)
T KOG0202|consen 656 LVFARAEPQHKLKIVEALQSR-G-EVVAMTGDGVNDAPALKK 695 (972)
T ss_pred eEEEecCchhHHHHHHHHHhc-C-CEEEecCCCccchhhhhh
Confidence 12456799999999999998 6 899999999999999986
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.77 E-value=6.4e-19 Score=155.88 Aligned_cols=83 Identities=24% Similarity=0.358 Sum_probs=76.9
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
.+.+.||.+|-+++||+.|++.+|+|||++-++..++++.|+| ++.++ +.|++|.+.++
T Consensus 445 kDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiAe-------------------atPEdK~~~I~ 503 (681)
T COG2216 445 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIAE-------------------ATPEDKLALIR 503 (681)
T ss_pred hhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhhc-------------------CChHHHHHHHH
Confidence 3578999999999999999999999999999999999999998 77777 57999999999
Q ss_pred HHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
+-+++ | +-|+|.|||.||+|+++.
T Consensus 504 ~eQ~~-g-rlVAMtGDGTNDAPALAq 527 (681)
T COG2216 504 QEQAE-G-RLVAMTGDGTNDAPALAQ 527 (681)
T ss_pred HHHhc-C-cEEEEcCCCCCcchhhhh
Confidence 99998 6 799999999999999975
No 34
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.76 E-value=5.7e-17 Score=125.93 Aligned_cols=169 Identities=18% Similarity=0.339 Sum_probs=136.6
Q ss_pred EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHHHHH
Q 025042 85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELV 164 (259)
Q Consensus 85 ~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~e~l 164 (259)
.++.|+|||+|-.+..+.+...++.++. ..+.+....+.+++.+++.+++..+..+.+++.+++... ..++|+.++++
T Consensus 5 vi~sDFDGTITl~Ds~~~itdtf~~~e~-k~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk~-i~Idp~fKef~ 82 (220)
T COG4359 5 VIFSDFDGTITLNDSNDYITDTFGPGEW-KALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLKD-IKIDPGFKEFV 82 (220)
T ss_pred EEEecCCCceEecchhHHHHhccCchHH-HHHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHhh-cccCccHHHHH
Confidence 4666999999999988999988887664 377777888899999999999999988888888777764 57899999999
Q ss_pred HHHHHCCCcEEEEeCCccccHHHHHHHcC----CCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042 165 KKLKANNKNVYLISGGFRHMINPIASVLG----IPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240 (259)
Q Consensus 165 ~~Lk~~g~~v~ivTg~~~~~~~~i~~~lg----i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~ 240 (259)
++.++++++++++|++....+.++.+.++ +..-+.+.+...++.+|...-....+. .-+-+|...|+.+.+.+
T Consensus 83 e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds-~fG~dK~~vI~~l~e~~-- 159 (220)
T COG4359 83 EWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDS-QFGHDKSSVIHELSEPN-- 159 (220)
T ss_pred HHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCcc-ccCCCcchhHHHhhcCC--
Confidence 99999999999999999999999998776 332245555555656665543333332 23578999999999886
Q ss_pred CeEEEEecCcccHHhhhc
Q 025042 241 KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 241 ~~v~~vGDg~ND~~al~~ 258 (259)
+.++|+|||+.|+.|++.
T Consensus 160 e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 160 ESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred ceEEEecCCcccccHhhh
Confidence 689999999999999874
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.75 E-value=5.7e-19 Score=145.25 Aligned_cols=88 Identities=25% Similarity=0.375 Sum_probs=72.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCCh--HHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGK--AAA 230 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K--~~~ 230 (259)
.++++|++.++|+.|+++|++++|+|||+...+..+++++|++...+|+... ..|.+| ..+
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~-----------------~kP~~k~~~~~ 187 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI-----------------GKPEPKIFLRI 187 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE-----------------TTTHHHHHHHH
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc-----------------ccccchhHHHH
Confidence 3579999999999999999999999999999999999999997333777631 147777 666
Q ss_pred HHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 231 VQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 231 v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
++.++.+. ++|+|||||.||++|++.+
T Consensus 188 i~~l~~~~--~~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 188 IKELQVKP--GEVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHTCTG--GGEEEEESSGGHHHHHHHS
T ss_pred HHHHhcCC--CEEEEEccCHHHHHHHHhC
Confidence 66655332 6999999999999999863
No 36
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=99.74 E-value=8.8e-19 Score=174.09 Aligned_cols=61 Identities=13% Similarity=0.067 Sum_probs=57.0
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE 98 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~ 98 (259)
+++.++.+|+++|++++.+....+.++++++++++++..+|.+++++++|||||||||.++
T Consensus 403 l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~ 463 (1054)
T TIGR01657 403 LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDG 463 (1054)
T ss_pred HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCC
Confidence 6788899999999999888888899999999999999999999999999999999998874
No 37
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=99.74 E-value=8.2e-18 Score=166.28 Aligned_cols=61 Identities=11% Similarity=0.199 Sum_probs=55.8
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE 98 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~ 98 (259)
+++.|+++||++|++++.+....+.+++++|+++|+.+++|.++.++++|||||||||.++
T Consensus 299 i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~ 359 (997)
T TIGR01106 299 IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 359 (997)
T ss_pred HHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCc
Confidence 5678889999999988887777788999999999999999999999999999999998764
No 38
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=99.71 E-value=3.4e-17 Score=160.78 Aligned_cols=105 Identities=16% Similarity=0.221 Sum_probs=75.2
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc------Eee-cceeecCCCc---eecccCCCCCc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN------IFA-NQLLFKSSGE---FLGFDANEPTS 222 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~------~~~-~~l~~~~~~~---~~g~~~~~~~~ 222 (259)
.+++||++++.++.|++.|++++|+|||+..++..+++++|+...+ .+. ..+..-.+.. ...........
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 3579999999999999999999999999999999999999995311 111 0000000000 00000111234
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.|++|..+++.+++. | +.|+|+|||.||+||++.+
T Consensus 615 ~P~~K~~iV~~lq~~-g-~~va~iGDG~ND~~alk~A 649 (917)
T TIGR01116 615 EPSHKSELVELLQEQ-G-EIVAMTGDGVNDAPALKKA 649 (917)
T ss_pred CHHHHHHHHHHHHhc-C-CeEEEecCCcchHHHHHhC
Confidence 688999999998865 6 7999999999999999863
No 39
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=99.71 E-value=3.2e-17 Score=162.26 Aligned_cols=105 Identities=20% Similarity=0.209 Sum_probs=77.5
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC---------------
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA--------------- 217 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~--------------- 217 (259)
.+++||++++.++.+++.|++++|+|||+..++..+++++|+...+.....-....+..++|...
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 35899999999999999999999999999999999999999953221110000000011122111
Q ss_pred -CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 218 -NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 218 -~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
......|++|.++++.++++ | +.|+|+|||.||+||++..
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~-g-~~Vam~GDGvNDapaLk~A 764 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRR-K-AFCAMTGDGVNDSPSLKMA 764 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhc-C-CeeEEeCCCcchHHHHHhC
Confidence 12345689999999999987 6 7899999999999999853
No 40
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.71 E-value=2.1e-16 Score=130.14 Aligned_cols=172 Identities=16% Similarity=0.160 Sum_probs=109.1
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHhcCchhHH-----HHHH-----HHcCCCCcHHHHHHHHHhhcCC-CHHHH----H
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVA-----EWTA-----RAMGGSVPFEEALAARLSLFKP-SLSQV----Q 146 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~i----~ 146 (259)
..++++||+|||||+.++...+........... .... ....+..+......-....+.+ +.+.+ .
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~fl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~ 83 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNALLVIPLLPIIAIALLIGGRAARWPMSLLLWACTFGHREAHLQDLEA 83 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHcCCCHHHHHHHHH
Confidence 457899999999999988776655544211110 0000 0001111111110001112222 22222 3
Q ss_pred HHHHhC--CCCCCccHHHHHH-HHHHCCCcEEEEeCCccccHHHHHHHcCC-CCCcEeecceeecCCCceecccCCCCCc
Q 025042 147 DFLEKR--PPRLSPGIDELVK-KLKANNKNVYLISGGFRHMINPIASVLGI-PPENIFANQLLFKSSGEFLGFDANEPTS 222 (259)
Q Consensus 147 ~~~~~~--~~~~~p~~~e~l~-~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi-~~~~~~~~~l~~~~~~~~~g~~~~~~~~ 222 (259)
+|.+.. ...++|++.++|+ .++++|++++|+|+..+..++++++..++ ..+++.++.++..+.|.+.| +.|
T Consensus 84 ~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g-----~~c 158 (210)
T TIGR01545 84 DFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLP-----LRC 158 (210)
T ss_pred HHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcC-----ccC
Confidence 343321 1357999999996 77889999999999999999999988544 11378888888754444433 347
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.++.|...++++... ....++++|||.||+||++.+
T Consensus 159 ~g~~Kv~rl~~~~~~-~~~~~~aYsDS~~D~pmL~~a 194 (210)
T TIGR01545 159 LGHEKVAQLEQKIGS-PLKLYSGYSDSKQDNPLLAFC 194 (210)
T ss_pred CChHHHHHHHHHhCC-ChhheEEecCCcccHHHHHhC
Confidence 788999999988753 336789999999999999865
No 41
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.70 E-value=3.5e-16 Score=129.91 Aligned_cols=92 Identities=16% Similarity=0.268 Sum_probs=78.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|++|+++|++++++|+..+..++.+++++|+. .+|..... .+....+++++..+..
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~--~~F~~i~g------------~~~~~~~KP~P~~l~~ 153 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLA--DYFDVIVG------------GDDVPPPKPDPEPLLL 153 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCc--cccceEEc------------CCCCCCCCcCHHHHHH
Confidence 468999999999999999999999999999999999999997 66665431 1112346788999999
Q ss_pred HHHHcCCC--eEEEEecCcccHHhhhcC
Q 025042 234 IRKAHAYK--VLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 234 l~~~~g~~--~v~~vGDg~ND~~al~~v 259 (259)
+++++|.+ +++||||+.+|+.|++.+
T Consensus 154 ~~~~~~~~~~~~l~VGDs~~Di~aA~~A 181 (220)
T COG0546 154 LLEKLGLDPEEALMVGDSLNDILAAKAA 181 (220)
T ss_pred HHHHhCCChhheEEECCCHHHHHHHHHc
Confidence 99999984 899999999999999853
No 42
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.70 E-value=1.2e-15 Score=126.38 Aligned_cols=169 Identities=20% Similarity=0.278 Sum_probs=127.4
Q ss_pred EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHhCCCCCCccHH
Q 025042 85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK---PSLSQVQDFLEKRPPRLSPGID 161 (259)
Q Consensus 85 ~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~p~~~ 161 (259)
+++||+|+||++.++...+.+.++.+.....+...+.. ..+.+.+...+..+. -..+.+.+.++. .++.|++.
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~--~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~--ip~~pgm~ 77 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPK--GGWTEYMDRVLQLLHEQGVTPEDIRDALRS--IPIDPGMK 77 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccc--cchHHHHHHHHHHHHHcCCCHHHHHHHHHc--CCCCccHH
Confidence 68999999999999888888888766544555555543 244566666555553 356777777776 57899999
Q ss_pred HHHHHH--HHCCCcEEEEeCCccccHHHHHHHcCCCC--CcEeecceeecCCCceecccCC---CCCcCC-CChHHHHHH
Q 025042 162 ELVKKL--KANNKNVYLISGGFRHMINPIASVLGIPP--ENIFANQLLFKSSGEFLGFDAN---EPTSRS-GGKAAAVQQ 233 (259)
Q Consensus 162 e~l~~L--k~~g~~v~ivTg~~~~~~~~i~~~lgi~~--~~~~~~~l~~~~~~~~~g~~~~---~~~~~~-~~K~~~v~~ 233 (259)
++++.+ ++.|+.++|+|.++..+++.+++..|+.. .++|++...++++|.+.-...- ...|.+ -.|..++++
T Consensus 78 ~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~ 157 (234)
T PF06888_consen 78 ELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMCKGKILER 157 (234)
T ss_pred HHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccchHHHHHH
Confidence 999999 45799999999999999999999999863 3578888888888876432221 223332 479999999
Q ss_pred HHHHc---CC--CeEEEEecCcccHHhhh
Q 025042 234 IRKAH---AY--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 234 l~~~~---g~--~~v~~vGDg~ND~~al~ 257 (259)
+++.. |. ++++|||||.||...+.
T Consensus 158 ~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 158 LLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred HHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 99873 43 89999999999987653
No 43
>PRK11590 hypothetical protein; Provisional
Probab=99.69 E-value=7.9e-16 Score=126.97 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=107.6
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHh-c-Cchh---HHHHHHHHcCCCCcHHHH-H-H--H-HHhhcCC-CHHHH----H
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFC-G-AGKA---VAEWTARAMGGSVPFEEA-L-A--A-RLSLFKP-SLSQV----Q 146 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~-~-~~~~---~~~~~~~~~~~~~~~~~~-~-~--~-~~~~~~~-~~~~i----~ 146 (259)
..++++||+||||++.++...+...+ . .+.. ...+...+..+....... . . . ......+ +.+.+ +
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 84 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQALEA 84 (211)
T ss_pred cceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHHHH
Confidence 45799999999999877666655554 2 1111 111111111111111111 0 0 0 0001112 22222 2
Q ss_pred HHHHhC--CCCCCccHHHHH-HHHHHCCCcEEEEeCCccccHHHHHHHcCCC-CCcEeecceeecCCCceecccCCCCCc
Q 025042 147 DFLEKR--PPRLSPGIDELV-KKLKANNKNVYLISGGFRHMINPIASVLGIP-PENIFANQLLFKSSGEFLGFDANEPTS 222 (259)
Q Consensus 147 ~~~~~~--~~~~~p~~~e~l-~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~-~~~~~~~~l~~~~~~~~~g~~~~~~~~ 222 (259)
.|.... ...++||+.++| +.+++.|++++++|+..+..++++++.+|+. .+++.++.+... ++|...+ +.|
T Consensus 85 ~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~----~tg~~~g-~~c 159 (211)
T PRK11590 85 DFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRR----YGGWVLT-LRC 159 (211)
T ss_pred HHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEE----EccEECC-ccC
Confidence 332211 145799999999 5688899999999999999999999999941 127888887653 4444433 336
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.++.|...++++... ....++++|||.||+||++.+
T Consensus 160 ~g~~K~~~l~~~~~~-~~~~~~aY~Ds~~D~pmL~~a 195 (211)
T PRK11590 160 LGHEKVAQLERKIGT-PLRLYSGYSDSKQDNPLLYFC 195 (211)
T ss_pred CChHHHHHHHHHhCC-CcceEEEecCCcccHHHHHhC
Confidence 788999999988742 226789999999999999865
No 44
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.69 E-value=6.2e-16 Score=130.68 Aligned_cols=174 Identities=14% Similarity=0.178 Sum_probs=112.2
Q ss_pred CCCCCHHHHHhccCcCEEEEeCCCcccccch-----HHHHHHHhcC--c--hhHHHHHHHHcCCCCcHHHHHHHHHhhc-
Q 025042 69 NTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGA--G--KAVAEWTARAMGGSVPFEEALAARLSLF- 138 (259)
Q Consensus 69 ~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (259)
..+.+.+++...+++++|+||+||||+++.. +..+.+..+. + .........+ .+. +..+.+.......
T Consensus 8 ~~~~~~~~~~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~-~G~-~~~~~~~~~~~~~~ 85 (248)
T PLN02770 8 NSVESKSSLSGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENI-AGK-HNEDIALGLFPDDL 85 (248)
T ss_pred ccccccccccccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHc-CCC-CHHHHHHHHcCcch
Confidence 3455667788889999999999999998753 2222233321 1 1111111121 222 2332222211100
Q ss_pred CCC---HHHHHHHHH---hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCce
Q 025042 139 KPS---LSQVQDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEF 212 (259)
Q Consensus 139 ~~~---~~~i~~~~~---~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~ 212 (259)
... ......+.. .....++||+.++|++|+++|++++|+|+..+..++..++++|+. ++|...+..
T Consensus 86 ~~~~~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~--~~Fd~iv~~------ 157 (248)
T PLN02770 86 ERGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS--DFFQAVIIG------ 157 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh--hhCcEEEec------
Confidence 000 011111111 123678999999999999999999999999999999999999997 556443211
Q ss_pred ecccCCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 213 LGFDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 213 ~g~~~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+....++++++.+...++++|+ ++++||||+.+|+.+++.
T Consensus 158 ------~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~ 199 (248)
T PLN02770 158 ------SECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA 199 (248)
T ss_pred ------CcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH
Confidence 1112367888999999999987 789999999999999875
No 45
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.69 E-value=1e-15 Score=127.20 Aligned_cols=92 Identities=15% Similarity=0.140 Sum_probs=77.4
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|+.|+++|++++++|+.....++.+++++++. ++|...+.. +....++++++.++
T Consensus 90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~~------------~~~~~~Kp~~~~~~ 155 (222)
T PRK10826 90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR--DYFDALASA------------EKLPYSKPHPEVYL 155 (222)
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch--hcccEEEEc------------ccCCCCCCCHHHHH
Confidence 3579999999999999999999999999999999999999997 666543311 01123577888999
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.+++++|+ ++|+||||+.+|+++++.
T Consensus 156 ~~~~~~~~~~~~~~~igDs~~Di~aA~~ 183 (222)
T PRK10826 156 NCAAKLGVDPLTCVALEDSFNGMIAAKA 183 (222)
T ss_pred HHHHHcCCCHHHeEEEcCChhhHHHHHH
Confidence 99999998 899999999999999875
No 46
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.67 E-value=1.3e-15 Score=125.71 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=76.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++++|+..+..++.+++.+|+. .+|...+..+ ....+++|++.+++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~i~~~~------------~~~~~Kp~p~~~~~ 146 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD--EFFDVVITLD------------DVEHAKPDPEPVLK 146 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh--hceeEEEecC------------cCCCCCCCcHHHHH
Confidence 468999999999999999999999999999999999999997 6665543211 11235788999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++|. ++++||||+.+|+.+++.
T Consensus 147 ~~~~~~~~~~~~~~iGDs~~Di~aa~~ 173 (214)
T PRK13288 147 ALELLGAKPEEALMVGDNHHDILAGKN 173 (214)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 9999887 789999999999999875
No 47
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.66 E-value=1.7e-15 Score=128.66 Aligned_cols=161 Identities=18% Similarity=0.227 Sum_probs=105.1
Q ss_pred cCcCEEEEeCCCcccccc-hHH--HHH---HHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHH---H----HHH
Q 025042 81 RTADAVCFDVDSTVCVDE-GID--ELA---EFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS---Q----VQD 147 (259)
Q Consensus 81 ~~~k~vvFD~DGTLt~~~-~~~--~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----i~~ 147 (259)
..+++|+||+||||+++. ... .+. +..+...........+.+ .+..+.+...+.. ....+ . ...
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G--~~~~~~~~~l~~~-~~~~~~~~~l~~~~~~ 98 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEG--MKNEQAISEVLCW-SRDFLQMKRLAIRKED 98 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhcc-CCCHHHHHHHHHHHHH
Confidence 468999999999999874 222 233 333332222223233322 2223332222111 11111 1 111
Q ss_pred ---HHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCC
Q 025042 148 ---FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS 224 (259)
Q Consensus 148 ---~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~ 224 (259)
+.......++||+.++|+.|+++|++++|+|+.....++.+++++|+. .+|...+.. +....+
T Consensus 99 ~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~--~~Fd~ii~~------------~d~~~~ 164 (260)
T PLN03243 99 LYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME--GFFSVVLAA------------EDVYRG 164 (260)
T ss_pred HHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH--hhCcEEEec------------ccCCCC
Confidence 112223578999999999999999999999999999999999999996 555443211 111235
Q ss_pred CChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 225 GGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++.+...++++|+ ++++||||+.+|+.+++.
T Consensus 165 KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~ 200 (260)
T PLN03243 165 KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD 200 (260)
T ss_pred CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH
Confidence 7889999999999998 789999999999999875
No 48
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.66 E-value=3.8e-16 Score=126.38 Aligned_cols=96 Identities=33% Similarity=0.525 Sum_probs=74.7
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCC-CceecccCCCCCcCCCChHHHHHHH--
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSS-GEFLGFDANEPTSRSGGKAAAVQQI-- 234 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~-~~~~g~~~~~~~~~~~~K~~~v~~l-- 234 (259)
|++.+++++++++|++++|+|++....++++++.+|++..+++++.+ .+++ +...+...+.. . . +|...++++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~-~-~-~K~~~l~~~~~ 167 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSN-C-G-GKAEALKELYI 167 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEE-E-S-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCC-C-C-cHHHHHHHHHH
Confidence 66669999999999999999999999999999999998555888888 5444 33334332210 0 1 599999999
Q ss_pred -HH-HcCCCeEEEEecCcccHHhhh
Q 025042 235 -RK-AHAYKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 235 -~~-~~g~~~v~~vGDg~ND~~al~ 257 (259)
.. ..+...+++||||.||+||++
T Consensus 168 ~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 168 RDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HhhcCCCCCeEEEEECCHHHHHHhC
Confidence 33 223379999999999999986
No 49
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.66 E-value=2e-15 Score=126.04 Aligned_cols=91 Identities=12% Similarity=0.132 Sum_probs=74.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.+++++|+++|+++.++|++....++.+++++|+. +.|..... + +....++++++.+.+
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~--~~f~~i~~--------~----~~~~~~KP~p~~~~~ 159 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE--QRCAVLIG--------G----DTLAERKPHPLPLLV 159 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch--hcccEEEe--------c----CcCCCCCCCHHHHHH
Confidence 578999999999999999999999999998888899999986 55532210 0 111235788999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++|+ ++++||||+.+|+.+++.
T Consensus 160 ~~~~l~~~p~~~l~IGDs~~Di~aA~~ 186 (229)
T PRK13226 160 AAERIGVAPTDCVYVGDDERDILAARA 186 (229)
T ss_pred HHHHhCCChhhEEEeCCCHHHHHHHHH
Confidence 9999998 889999999999999875
No 50
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.64 E-value=8.9e-15 Score=121.50 Aligned_cols=93 Identities=18% Similarity=0.315 Sum_probs=75.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++++.|++.|++++++|++.....+.+++++|+. .+|...+. .+.....+++++.++
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~------------~~~~~~~kp~~~~~~ 156 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA--DYFSVVIG------------GDSLPNKKPDPAPLL 156 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc--cCccEEEc------------CCCCCCCCcChHHHH
Confidence 3679999999999999999999999999999999999999986 45543221 011123467888999
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
.++++++. ++++||||+.+|+++++.+
T Consensus 157 ~~~~~~~~~~~~~i~igD~~~Di~~a~~~ 185 (226)
T PRK13222 157 LACEKLGLDPEEMLFVGDSRNDIQAARAA 185 (226)
T ss_pred HHHHHcCCChhheEEECCCHHHHHHHHHC
Confidence 99999988 7899999999999998753
No 51
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.64 E-value=8.9e-15 Score=121.23 Aligned_cols=94 Identities=20% Similarity=0.254 Sum_probs=74.4
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|++|++.|++++++|+.....++.+++.+|+...++|...+.. ......+++++.+.
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~------------~~~~~~KP~p~~~~ 152 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP------------SDVAAGRPAPDLIL 152 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC------------CcCCCCCCCHHHHH
Confidence 357999999999999999999999999999999999999998521233322110 01123467899999
Q ss_pred HHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY---KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~---~~v~~vGDg~ND~~al~~ 258 (259)
...+++|+ ++++||||+.+|+.+++.
T Consensus 153 ~a~~~~~~~~~~~~~~igD~~~Di~aa~~ 181 (220)
T TIGR03351 153 RAMELTGVQDVQSVAVAGDTPNDLEAGIN 181 (220)
T ss_pred HHHHHcCCCChhHeEEeCCCHHHHHHHHH
Confidence 99999886 579999999999999875
No 52
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.64 E-value=1.7e-14 Score=122.09 Aligned_cols=171 Identities=16% Similarity=0.263 Sum_probs=120.6
Q ss_pred EEEEeCCCcccccc--------hHHHHHHHhc-Cchh----HHHHHHHHcC----CCCcHH-------HHHHHHHhhcCC
Q 025042 85 AVCFDVDSTVCVDE--------GIDELAEFCG-AGKA----VAEWTARAMG----GSVPFE-------EALAARLSLFKP 140 (259)
Q Consensus 85 ~vvFD~DGTLt~~~--------~~~~l~~~~~-~~~~----~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~ 140 (259)
-|+-|+|-|||.-. +.+-+.+... ..+. ...+..+|.. ..++.+ +.+......+.+
T Consensus 24 qvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m~eWw~k~~~l~~~ 103 (277)
T TIGR01544 24 QIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYMVEWWTKSHGLLVQ 103 (277)
T ss_pred EEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHHHHHHHHHHHHHhc
Confidence 58999999996521 2233333322 1121 2334444422 122222 333333344432
Q ss_pred ---CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC--CCcEeecceeecCCCceecc
Q 025042 141 ---SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP--PENIFANQLLFKSSGEFLGF 215 (259)
Q Consensus 141 ---~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~--~~~~~~~~l~~~~~~~~~g~ 215 (259)
+.+.+.+++......++||+.++++.|+++|++++|+|++....++.+++++|+. ...+++|.+.++++|.++|+
T Consensus 104 ~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~ 183 (277)
T TIGR01544 104 QAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGF 183 (277)
T ss_pred CCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCC
Confidence 5677778887556789999999999999999999999999999999999999983 34789999999999999995
Q ss_pred cCCCCCcCCCChHHHHH-HHHHHcC--C--CeEEEEecCcccHHhhh
Q 025042 216 DANEPTSRSGGKAAAVQ-QIRKAHA--Y--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 216 ~~~~~~~~~~~K~~~v~-~l~~~~g--~--~~v~~vGDg~ND~~al~ 257 (259)
. .+......|.+.+. ...+.++ . ++|+++|||.||++|+.
T Consensus 184 ~--~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 184 K--GPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred C--CCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 3 44555577887666 4666655 2 78999999999999975
No 53
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.63 E-value=6.6e-15 Score=121.24 Aligned_cols=91 Identities=14% Similarity=0.309 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++++|++....++.+++++|+. .+|...+. + +....++++++.+.+
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~--------~----~~~~~~Kp~p~~~~~ 149 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA--KYFSVLIG--------G----DSLAQRKPHPDPLLL 149 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH--hhCcEEEe--------c----CCCCCCCCChHHHHH
Confidence 578999999999999999999999999999999999999996 45543211 0 111235778999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++|+ ++++||||+.+|+++++.
T Consensus 150 ~~~~~~~~~~~~~~igDs~~d~~aa~~ 176 (213)
T TIGR01449 150 AAERLGVAPQQMVYVGDSRVDIQAARA 176 (213)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 9999998 789999999999999875
No 54
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.63 E-value=1.1e-14 Score=128.66 Aligned_cols=166 Identities=16% Similarity=0.156 Sum_probs=108.3
Q ss_pred HHhc-cCcCEEEEeCCCcccccch-HH--HHH---HHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC--HHH---
Q 025042 77 LQLW-RTADAVCFDVDSTVCVDEG-ID--ELA---EFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQ--- 144 (259)
Q Consensus 77 ~e~~-~~~k~vvFD~DGTLt~~~~-~~--~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--- 144 (259)
.|+| ...++|+||+||||+++.. .. .+. +..+...........+.. .+..+.+.......... .+.
T Consensus 124 ~~~~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G--~~~~~~l~~ll~~~~~~~~~e~l~~ 201 (381)
T PLN02575 124 QERMGCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEG--MKNEQAISEVLCWSRDPAELRRMAT 201 (381)
T ss_pred HHhccCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhhccCCHHHHHHHHH
Confidence 3555 3679999999999998652 22 232 233332222222333322 33333333322211110 011
Q ss_pred -HHHHHHh---CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042 145 -VQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP 220 (259)
Q Consensus 145 -i~~~~~~---~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~ 220 (259)
..++... ....++||+.++|+.|+++|++++|+|+..+..++.+++.+|+. ++|...+.. +.
T Consensus 202 ~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~--~yFd~Iv~s------------dd 267 (381)
T PLN02575 202 RKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR--GFFSVIVAA------------ED 267 (381)
T ss_pred HHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH--HHceEEEec------------Cc
Confidence 1122211 23568999999999999999999999999999999999999997 666553321 11
Q ss_pred CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
...++++++.+....+++|+ ++|+||||+.+|+.+++.
T Consensus 268 v~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~ 307 (381)
T PLN02575 268 VYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD 307 (381)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence 12357899999999999998 889999999999999875
No 55
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.63 E-value=1.2e-14 Score=116.98 Aligned_cols=157 Identities=20% Similarity=0.274 Sum_probs=98.9
Q ss_pred cCEEEEeCCCcccccchH-----HHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhc--CCCHHHH-------HHH
Q 025042 83 ADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KPSLSQV-------QDF 148 (259)
Q Consensus 83 ~k~vvFD~DGTLt~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i-------~~~ 148 (259)
+++|+||+||||++.... ....+..+.... .... ....+ .+..+.+....... ....+.+ .++
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD-KQYN-TSLGG-LSREDILRAILKLRKPGLSLETIHQLAERKNEL 77 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC-HHHH-HHcCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 478999999999987632 222233332211 1111 12222 33333333333222 1111211 112
Q ss_pred HH----hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCC
Q 025042 149 LE----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS 224 (259)
Q Consensus 149 ~~----~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~ 224 (259)
.. .....++||+.++|+.|+++|++++++|+. ..++.+++.+|++ ++|...+.. +....+
T Consensus 78 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~--~~f~~v~~~------------~~~~~~ 141 (185)
T TIGR02009 78 YRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT--DYFDAIVDA------------DEVKEG 141 (185)
T ss_pred HHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH--HHCCEeeeh------------hhCCCC
Confidence 11 223679999999999999999999999987 6678889999986 445432211 011135
Q ss_pred CChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 225 GGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++.++..++++|+ ++++||||+.+|+.+++.
T Consensus 142 kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~ 177 (185)
T TIGR02009 142 KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA 177 (185)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH
Confidence 6788889999999888 889999999999999875
No 56
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.63 E-value=2.5e-15 Score=125.03 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=75.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++++|++.+..++..++.+|+. .+|...+..+ . ...++++++.+..
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~iv~s~--------~----~~~~KP~p~~~~~ 157 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD--AHLDLLLSTH--------T----FGYPKEDQRLWQA 157 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH--HHCCEEEEee--------e----CCCCCCCHHHHHH
Confidence 578999999999999999999999999999999999999986 5554332111 1 1235788999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.++++|+ ++++||||+.+|+.+++.
T Consensus 158 ~~~~~~~~p~~~l~igDs~~di~aA~~ 184 (224)
T PRK14988 158 VAEHTGLKAERTLFIDDSEPILDAAAQ 184 (224)
T ss_pred HHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence 9999998 789999999999998875
No 57
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.63 E-value=6e-15 Score=126.26 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=74.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++++|+.....++.+++++++. .+|..... + +.....+++++.++.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~--~~f~~i~~--------~----d~~~~~Kp~p~~~~~ 165 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG--RYFRWIIG--------G----DTLPQKKPDPAALLF 165 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH--hhCeEEEe--------c----CCCCCCCCCcHHHHH
Confidence 468999999999999999999999999999999999999986 54543211 0 111235778889999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++|+ ++++||||+.||+.+++.
T Consensus 166 ~~~~~g~~~~~~l~IGD~~~Di~aA~~ 192 (272)
T PRK13223 166 VMKMAGVPPSQSLFVGDSRSDVLAAKA 192 (272)
T ss_pred HHHHhCCChhHEEEECCCHHHHHHHHH
Confidence 9999988 799999999999999874
No 58
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.62 E-value=2e-14 Score=117.20 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=75.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|++|+++|++++++|++....++.+++.+|+. ++|...+..+ ....++++++.++
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~--~~fd~i~~s~------------~~~~~KP~~~~~~ 155 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD--DPFDAVLSAD------------AVRAYKPAPQVYQ 155 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh--hhhheeEehh------------hcCCCCCCHHHHH
Confidence 3578999999999999999999999999999999999999986 5554332111 1123577889999
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
..++++|+ +++++|||+.+|+.+++.
T Consensus 156 ~~~~~~~~~p~~~~~vgD~~~Di~~A~~ 183 (198)
T TIGR01428 156 LALEALGVPPDEVLFVASNPWDLGGAKK 183 (198)
T ss_pred HHHHHhCCChhhEEEEeCCHHHHHHHHH
Confidence 99999998 789999999999999875
No 59
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.62 E-value=7.8e-15 Score=125.29 Aligned_cols=92 Identities=11% Similarity=0.124 Sum_probs=72.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++|+|+..+..++.+++.+++. .++...+ +.+ +....++++++.+..
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~--~~~~d~i-------~~~----~~~~~~KP~p~~~~~ 166 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ--GYRPDHV-------VTT----DDVPAGRPYPWMALK 166 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc--CCCceEE-------EcC----CcCCCCCCChHHHHH
Confidence 578999999999999999999999999999999999888764 3321111 111 111235778899999
Q ss_pred HHHHcCC---CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY---KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~---~~v~~vGDg~ND~~al~~ 258 (259)
.++++|+ ++++||||+.+|+.+++.
T Consensus 167 a~~~l~~~~~~e~l~IGDs~~Di~aA~~ 194 (267)
T PRK13478 167 NAIELGVYDVAACVKVDDTVPGIEEGLN 194 (267)
T ss_pred HHHHcCCCCCcceEEEcCcHHHHHHHHH
Confidence 9999886 579999999999999875
No 60
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.62 E-value=7.3e-15 Score=120.50 Aligned_cols=92 Identities=20% Similarity=0.291 Sum_probs=76.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|++|+++|++++++|+.....++..++.+|+. .+|...+.. +....+++|+..++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~--~~f~~i~~~------------~~~~~~KP~~~~~~ 138 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL--PLFDHVIGS------------DEVPRPKPAPDIVR 138 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh--hheeeEEec------------CcCCCCCCChHHHH
Confidence 4678999999999999999999999999999999999999996 555543211 01123678999999
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
++++++|+ ++++||||+.+|+.+++.
T Consensus 139 ~~~~~~~~~~~~~l~igD~~~Di~aA~~ 166 (205)
T TIGR01454 139 EALRLLDVPPEDAVMVGDAVTDLASARA 166 (205)
T ss_pred HHHHHcCCChhheEEEcCCHHHHHHHHH
Confidence 99999987 789999999999999875
No 61
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.61 E-value=1e-14 Score=124.70 Aligned_cols=89 Identities=21% Similarity=0.369 Sum_probs=72.8
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
..+++||+.++|++|+++|+++.|+|+..+..++.+++++|+. ++|.... .+ +. ..+|...+.
T Consensus 140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~--~~F~~vi--------~~----~~---~~~k~~~~~ 202 (273)
T PRK13225 140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR--SLFSVVQ--------AG----TP---ILSKRRALS 202 (273)
T ss_pred cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh--hheEEEE--------ec----CC---CCCCHHHHH
Confidence 3578999999999999999999999999999999999999997 6665322 11 00 124668888
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.+++++++ ++++||||+.+|+.+++.
T Consensus 203 ~~l~~~~~~p~~~l~IGDs~~Di~aA~~ 230 (273)
T PRK13225 203 QLVAREGWQPAAVMYVGDETRDVEAARQ 230 (273)
T ss_pred HHHHHhCcChhHEEEECCCHHHHHHHHH
Confidence 88888887 789999999999999875
No 62
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.59 E-value=5.3e-14 Score=116.57 Aligned_cols=91 Identities=15% Similarity=0.204 Sum_probs=75.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|++|+++|++++++|++....+...++.+|+. .+|...+..+ ....++++++.++.
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~--~~f~~i~~~~------------~~~~~KP~~~~~~~ 158 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR--DFFDAVITSE------------EEGVEKPHPKIFYA 158 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH--HhccEEEEec------------cCCCCCCCHHHHHH
Confidence 578999999999999999999999999988889999999996 5564432111 11235778899999
Q ss_pred HHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
.++++|+ ++++||||+. +|+.+++.
T Consensus 159 ~~~~~~~~~~~~~~igDs~~~di~~A~~ 186 (221)
T TIGR02253 159 ALKRLGVKPEEAVMVGDRLDKDIKGAKN 186 (221)
T ss_pred HHHHcCCChhhEEEECCChHHHHHHHHH
Confidence 9999998 7899999998 99999875
No 63
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=99.59 E-value=1.6e-14 Score=134.61 Aligned_cols=104 Identities=22% Similarity=0.233 Sum_probs=77.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc-Eee--cceeec--CC---CceecccCCCCCcCC
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN-IFA--NQLLFK--SS---GEFLGFDANEPTSRS 224 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~-~~~--~~l~~~--~~---~~~~g~~~~~~~~~~ 224 (259)
.++.|||+++.++.+++.|+++-|+|||+-.++++++.+.||-.+. -|. +--+|. .+ ..+..+........|
T Consensus 645 kDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 645 KDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred cCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 4589999999999999999999999999999999999999984211 000 000000 00 012223333455679
Q ss_pred CChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 225 GGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.+|-..++.|+++ | +.|+.-|||.||+|||+.
T Consensus 725 ~DK~lLVk~L~~~-g-~VVAVTGDGTNDaPALke 756 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQ-G-EVVAVTGDGTNDAPALKE 756 (1034)
T ss_pred chHHHHHHHHHhc-C-cEEEEecCCCCCchhhhh
Confidence 9999999999966 5 788888999999999985
No 64
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.59 E-value=1.8e-14 Score=122.05 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=73.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|+.|+++|++++|+|+.....++.+++++|+. .+|...+ +. .+.....+|+++.+.
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~--~~f~d~i-------i~----~~~~~~~KP~p~~~~ 163 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ--GYRPDYN-------VT----TDDVPAGRPAPWMAL 163 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc--CCCCceE-------Ec----cccCCCCCCCHHHHH
Confidence 3578999999999999999999999999999999999999986 4432111 11 111123567888999
Q ss_pred HHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY---KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~---~~v~~vGDg~ND~~al~~ 258 (259)
..++++|+ ++++||||+.+|+.+++.
T Consensus 164 ~a~~~l~~~~~~~~l~IGDs~~Di~aA~~ 192 (253)
T TIGR01422 164 KNAIELGVYDVAACVKVGDTVPDIEEGRN 192 (253)
T ss_pred HHHHHcCCCCchheEEECCcHHHHHHHHH
Confidence 99998885 579999999999999875
No 65
>PRK11587 putative phosphatase; Provisional
Probab=99.58 E-value=8.8e-14 Score=115.26 Aligned_cols=91 Identities=11% Similarity=0.061 Sum_probs=71.4
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|+.|+++|++++++|++.....+...+..++. .+...+ .+. ....++++++.+.
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~---~~~~i~--------~~~----~~~~~KP~p~~~~ 145 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP---APEVFV--------TAE----RVKRGKPEPDAYL 145 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC---CccEEE--------EHH----HhcCCCCCcHHHH
Confidence 3578999999999999999999999999888777778888874 121111 110 1123577889999
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
..++++|+ ++++||||+.+|+.+++.
T Consensus 146 ~~~~~~g~~p~~~l~igDs~~di~aA~~ 173 (218)
T PRK11587 146 LGAQLLGLAPQECVVVEDAPAGVLSGLA 173 (218)
T ss_pred HHHHHcCCCcccEEEEecchhhhHHHHH
Confidence 99999998 899999999999999875
No 66
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.58 E-value=6.9e-14 Score=112.57 Aligned_cols=89 Identities=18% Similarity=0.180 Sum_probs=70.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|++|+++|++++++|++. ....+++.+|+. .+|...+.. +....++++++.++.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~--~~f~~~~~~------------~~~~~~kp~p~~~~~ 149 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLI--DYFDAIVDP------------AEIKKGKPDPEIFLA 149 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcH--hhCcEEEeh------------hhcCCCCCChHHHHH
Confidence 4689999999999999999999999764 356788999986 555433211 111235789999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.++++++ ++++||||+.+|+.+++.
T Consensus 150 ~~~~~~~~~~~~v~vgD~~~di~aA~~ 176 (185)
T TIGR01990 150 AAEGLGVSPSECIGIEDAQAGIEAIKA 176 (185)
T ss_pred HHHHcCCCHHHeEEEecCHHHHHHHHH
Confidence 9999988 789999999999999875
No 67
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.57 E-value=7.3e-14 Score=115.84 Aligned_cols=160 Identities=18% Similarity=0.226 Sum_probs=101.5
Q ss_pred cCcCEEEEeCCCcccccchH--HHHH---HHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHHHHH----H
Q 025042 81 RTADAVCFDVDSTVCVDEGI--DELA---EFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDF----L 149 (259)
Q Consensus 81 ~~~k~vvFD~DGTLt~~~~~--~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~----~ 149 (259)
.++++++||+||||++.... ..+. ...+...........+.. .+..+.+........ ...+.+... +
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKG--VKLYEIIDIISKEHGVTLAKAELEPVYRAEV 79 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 35899999999999986532 2332 223322122223333221 233333333222221 122332211 1
Q ss_pred H---hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042 150 E---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 226 (259)
Q Consensus 150 ~---~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 226 (259)
. .....++||+.++|+.| +++++++|++.+..++..++.+|+. .+|...+ +++.. ...+++
T Consensus 80 ~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~--~~F~~~v-------~~~~~----~~~~KP 143 (221)
T PRK10563 80 ARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML--HYFPDKL-------FSGYD----IQRWKP 143 (221)
T ss_pred HHHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH--HhCcceE-------eeHHh----cCCCCC
Confidence 1 12467899999999998 3899999999989999999999996 5554322 11111 123578
Q ss_pred hHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 227 KAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 227 K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++.+...++++|+ ++|+||||+.+|+.+++.
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~ 177 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA 177 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH
Confidence 99999999999998 789999999999999875
No 68
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.56 E-value=3.4e-14 Score=130.31 Aligned_cols=91 Identities=22% Similarity=0.331 Sum_probs=74.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++||+.++|++|+++|+++.|+|++.+..++.+++.+|+. ++|...+..+ . ..+++|++.+.
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~--~~f~~i~~~d--------~-----v~~~~kP~~~~ 392 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD--QWVTETFSIE--------Q-----INSLNKSDLVK 392 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH--hhcceeEecC--------C-----CCCCCCcHHHH
Confidence 3578999999999999999999999999999999999999997 6665533211 0 11245667888
Q ss_pred HHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
..+++++.++++||||+.+|+.+++.
T Consensus 393 ~al~~l~~~~~v~VGDs~~Di~aAk~ 418 (459)
T PRK06698 393 SILNKYDIKEAAVVGDRLSDINAAKD 418 (459)
T ss_pred HHHHhcCcceEEEEeCCHHHHHHHHH
Confidence 88887777899999999999999875
No 69
>PRK09449 dUMP phosphatase; Provisional
Probab=99.55 E-value=3.1e-13 Score=112.25 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=72.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+ .|++++++|++....++..++++|+. .+|...+..+ ....++|+++.+..
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~v~~~~------------~~~~~KP~p~~~~~ 158 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR--DYFDLLVISE------------QVGVAKPDVAIFDY 158 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH--HHcCEEEEEC------------ccCCCCCCHHHHHH
Confidence 568999999999999 57999999999999999999999986 5554332111 11235788999999
Q ss_pred HHHHcCC---CeEEEEecCc-ccHHhhhc
Q 025042 234 IRKAHAY---KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~---~~v~~vGDg~-ND~~al~~ 258 (259)
+++++|. ++++||||+. +|+.+++.
T Consensus 159 ~~~~~~~~~~~~~~~vgD~~~~Di~~A~~ 187 (224)
T PRK09449 159 ALEQMGNPDRSRVLMVGDNLHSDILGGIN 187 (224)
T ss_pred HHHHcCCCCcccEEEEcCCcHHHHHHHHH
Confidence 9999986 5799999998 69998875
No 70
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.54 E-value=2.2e-13 Score=111.06 Aligned_cols=88 Identities=17% Similarity=0.177 Sum_probs=71.3
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR 235 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~ 235 (259)
+.++..++|+.|++.|++++|+||..+..++.+++.+|+. .+|...+..+ .... +++++.+....
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~~~~~~------------~~~~-KP~p~~~~~~~ 171 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE--ILFPVQIWME------------DCPP-KPNPEPLILAA 171 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch--hhCCEEEeec------------CCCC-CcCHHHHHHHH
Confidence 4455699999999999999999999999999999999997 6664432211 1112 67888888888
Q ss_pred HHcCC--CeEEEEecCcccHHhhhc
Q 025042 236 KAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 236 ~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++|+ ++|+||||+.+|+.+++.
T Consensus 172 ~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 172 KALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred HHhCcCcccEEEEeCCHHHHHHHHh
Confidence 98887 789999999999999875
No 71
>PLN02940 riboflavin kinase
Probab=99.52 E-value=1.4e-13 Score=123.03 Aligned_cols=92 Identities=17% Similarity=0.126 Sum_probs=74.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH-HcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS-VLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~-~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
...++||+.++|+.|+++|++++|+|+..+..++..++ .+|+. ++|...+.. +....++++++.+
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~--~~Fd~ii~~------------d~v~~~KP~p~~~ 156 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK--ESFSVIVGG------------DEVEKGKPSPDIF 156 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH--hhCCEEEeh------------hhcCCCCCCHHHH
Confidence 35689999999999999999999999999888888776 68885 445432211 1112357889999
Q ss_pred HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
...++++|+ ++|+||||+.+|+.+++.
T Consensus 157 ~~a~~~lgv~p~~~l~VGDs~~Di~aA~~ 185 (382)
T PLN02940 157 LEAAKRLNVEPSNCLVIEDSLPGVMAGKA 185 (382)
T ss_pred HHHHHHcCCChhHEEEEeCCHHHHHHHHH
Confidence 999999988 889999999999999875
No 72
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.52 E-value=1.1e-14 Score=115.48 Aligned_cols=113 Identities=17% Similarity=0.132 Sum_probs=87.7
Q ss_pred HhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCC
Q 025042 78 QLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLS 157 (259)
Q Consensus 78 e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 157 (259)
|.++.+|+++||+|||||++..+. -..+.+.. ....+
T Consensus 2 ~~~~~i~~~v~d~dGv~tdg~~~~-----~~~g~~~~--------------------------------------~~~~~ 38 (169)
T TIGR02726 2 EQAKNIKLVILDVDGVMTDGRIVI-----NDEGIESR--------------------------------------NFDIK 38 (169)
T ss_pred CccccCeEEEEeCceeeECCeEEE-----cCCCcEEE--------------------------------------EEecc
Confidence 567889999999999999986310 00111000 01233
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA 237 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~ 237 (259)
++. .++.|++.|+++.|+|+.....++.+++++|+. ++|.. .++|++.++.++++
T Consensus 39 D~~--~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~---------------------~kpkp~~~~~~~~~ 93 (169)
T TIGR02726 39 DGM--GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEG---------------------IKKKTEPYAQMLEE 93 (169)
T ss_pred hHH--HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEec---------------------CCCCHHHHHHHHHH
Confidence 444 678889999999999999999999999999996 56643 25788999999999
Q ss_pred cCC--CeEEEEecCcccHHhhhc
Q 025042 238 HAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 238 ~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+|+ ++++||||+.||++|++.
T Consensus 94 l~~~~~ev~~iGD~~nDi~~~~~ 116 (169)
T TIGR02726 94 MNISDAEVCYVGDDLVDLSMMKR 116 (169)
T ss_pred cCcCHHHEEEECCCHHHHHHHHH
Confidence 988 799999999999999975
No 73
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.52 E-value=3.8e-13 Score=110.07 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=70.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++|+|+.... .+..++.+|+. .+|...+..+ . ...++++++.+..
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~--~~fd~i~~s~--------~----~~~~KP~~~~~~~ 168 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL--EYFDFVVTSY--------E----VGAEKPDPKIFQE 168 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH--HhcceEEeec--------c----cCCCCCCHHHHHH
Confidence 368999999999999999999999987664 57788889985 4554332111 0 1124678889999
Q ss_pred HHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
.++++|+ ++++||||+. +|+.+++.
T Consensus 169 ~~~~~~~~~~~~~~IgD~~~~Di~~A~~ 196 (203)
T TIGR02252 169 ALERAGISPEEALHIGDSLRNDYQGARA 196 (203)
T ss_pred HHHHcCCChhHEEEECCCchHHHHHHHH
Confidence 9999998 7999999997 89998875
No 74
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.51 E-value=4.2e-13 Score=111.19 Aligned_cols=90 Identities=18% Similarity=0.270 Sum_probs=73.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|++|+++ ++++++|++....++.+++++|+. .+|...+..+ ....++++++.++.
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~--~~fd~i~~~~------------~~~~~KP~~~~~~~ 160 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF--PFFDDIFVSE------------DAGIQKPDKEIFNY 160 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH--hhcCEEEEcC------------ccCCCCCCHHHHHH
Confidence 57899999999999999 999999999999999999999996 5554332111 11235778899999
Q ss_pred HHHHc-CC--CeEEEEecCc-ccHHhhhc
Q 025042 234 IRKAH-AY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 234 l~~~~-g~--~~v~~vGDg~-ND~~al~~ 258 (259)
..+++ |+ ++++||||+. +|+.+++.
T Consensus 161 ~~~~~~~~~~~~~v~igD~~~~di~~A~~ 189 (224)
T TIGR02254 161 ALERMPKFSKEEVLMIGDSLTADIKGGQN 189 (224)
T ss_pred HHHHhcCCCchheEEECCCcHHHHHHHHH
Confidence 99998 87 7899999998 89999875
No 75
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.51 E-value=3.3e-13 Score=116.34 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=71.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++++|+.....+..+++.++.. .++.. +.+ +. .+....++++++.+..
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~--~~~~~-~~~-----v~----~~~~~~~KP~p~~~~~ 210 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGP--ERAQG-LDV-----FA----GDDVPKKKPDPDIYNL 210 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccc--cccCc-eEE-----Ee----ccccCCCCCCHHHHHH
Confidence 478999999999999999999999999998888888776432 22211 000 10 1111235788999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++|+ ++++||||+.+|+.+++.
T Consensus 211 a~~~~~~~p~~~l~IGDs~~Di~aA~~ 237 (286)
T PLN02779 211 AAETLGVDPSRCVVVEDSVIGLQAAKA 237 (286)
T ss_pred HHHHhCcChHHEEEEeCCHHhHHHHHH
Confidence 9999998 789999999999999875
No 76
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.51 E-value=3.6e-13 Score=111.81 Aligned_cols=163 Identities=18% Similarity=0.181 Sum_probs=103.7
Q ss_pred CcCEEEEeCCCcccccchHH-----HHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCC-CHHHHHH-----HHH
Q 025042 82 TADAVCFDVDSTVCVDEGID-----ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQD-----FLE 150 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~-----~~~ 150 (259)
++++++||+||||+|++..+ .+.+.++......................+........+ ....... ...
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 47899999999999987433 333334433222222222111111111222111111110 1111111 111
Q ss_pred -hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042 151 -KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA 229 (259)
Q Consensus 151 -~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~ 229 (259)
.....+.||+.++++.|+++|+.+.+.|++.+..++..++.+|+. ++|...+.- +....++|.++
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~--~~f~~~v~~------------~dv~~~KP~Pd 146 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL--DYFDVIVTA------------DDVARGKPAPD 146 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh--hhcchhccH------------HHHhcCCCCCH
Confidence 124579999999999999999999999999999999999999987 666553311 11234577888
Q ss_pred HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
....-.+++|+ .+|+.|.|+.+++.+++.
T Consensus 147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a 177 (221)
T COG0637 147 IYLLAAERLGVDPEECVVVEDSPAGIQAAKA 177 (221)
T ss_pred HHHHHHHHcCCChHHeEEEecchhHHHHHHH
Confidence 88888888888 899999999999999875
No 77
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.50 E-value=4.9e-13 Score=108.01 Aligned_cols=89 Identities=10% Similarity=0.101 Sum_probs=71.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..+.|+ .++|+.|++. ++++++|++.+..++.+++++|+. .+|...+.. +....++++++.+..
T Consensus 87 ~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~--~~fd~i~~~------------~~~~~~KP~p~~~~~ 150 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR--RYFDAVVAA------------DDVQHHKPAPDTFLR 150 (188)
T ss_pred CCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH--hHceEEEeh------------hhccCCCCChHHHHH
Confidence 456775 6899999875 789999999999999999999996 555543211 111235789999999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
..+++|+ ++++||||+.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~l~igDs~~di~aA~~ 177 (188)
T PRK10725 151 CAQLMGVQPTQCVVFEDADFGIQAARA 177 (188)
T ss_pred HHHHcCCCHHHeEEEeccHhhHHHHHH
Confidence 9999997 789999999999999875
No 78
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.50 E-value=2.8e-14 Score=111.93 Aligned_cols=73 Identities=22% Similarity=0.276 Sum_probs=65.4
Q ss_pred HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042 163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY-- 240 (259)
Q Consensus 163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~-- 240 (259)
++++|+++|++++|+|++....++.+++++|++ .+|.. .++|++.++++++++|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~---------------------~~~k~~~~~~~~~~~~~~~ 92 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQG---------------------QSNKLIAFSDILEKLALAP 92 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEec---------------------ccchHHHHHHHHHHcCCCH
Confidence 899999999999999999999999999999996 55542 25799999999999887
Q ss_pred CeEEEEecCcccHHhhhc
Q 025042 241 KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 241 ~~v~~vGDg~ND~~al~~ 258 (259)
++++||||+.||++|++.
T Consensus 93 ~~~~~vGDs~~D~~~~~~ 110 (154)
T TIGR01670 93 ENVAYIGDDLIDWPVMEK 110 (154)
T ss_pred HHEEEECCCHHHHHHHHH
Confidence 799999999999999875
No 79
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.49 E-value=1.6e-13 Score=108.61 Aligned_cols=93 Identities=22% Similarity=0.353 Sum_probs=76.2
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
....++|++.++|+.|+++|++++++|+.....++..++++|+. ..|...+..+ . ...++++...+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~--~~f~~i~~~~--------~----~~~~Kp~~~~~ 139 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD--DYFDEIISSD--------D----VGSRKPDPDAY 139 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG--GGCSEEEEGG--------G----SSSSTTSHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc--cccccccccc--------h----hhhhhhHHHHH
Confidence 34689999999999999999999999999999999999999986 4444322111 1 12357888999
Q ss_pred HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++++|+ ++++||||+.+|+.+++.
T Consensus 140 ~~~~~~~~~~p~~~~~vgD~~~d~~~A~~ 168 (176)
T PF13419_consen 140 RRALEKLGIPPEEILFVGDSPSDVEAAKE 168 (176)
T ss_dssp HHHHHHHTSSGGGEEEEESSHHHHHHHHH
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHH
Confidence 999999988 899999999999999874
No 80
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.49 E-value=6.7e-14 Score=112.90 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=65.3
Q ss_pred HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC-
Q 025042 162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY- 240 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~- 240 (259)
..++.|+++|+++.++||.....+..+++++|++ .+|.. .++|...++++++++|+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g---------------------~~~k~~~l~~~~~~~gl~ 111 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG---------------------QSNKLIAFSDLLEKLAIA 111 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC---------------------CCcHHHHHHHHHHHhCCC
Confidence 3778888899999999999999999999999996 55532 25799999999999998
Q ss_pred -CeEEEEecCcccHHhhhcC
Q 025042 241 -KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 241 -~~v~~vGDg~ND~~al~~v 259 (259)
++++||||+.||++|++.+
T Consensus 112 ~~ev~~VGDs~~D~~~a~~a 131 (183)
T PRK09484 112 PEQVAYIGDDLIDWPVMEKV 131 (183)
T ss_pred HHHEEEECCCHHHHHHHHHC
Confidence 7999999999999999753
No 81
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.48 E-value=8e-13 Score=107.99 Aligned_cols=161 Identities=14% Similarity=0.074 Sum_probs=99.0
Q ss_pred CEEEEeCCCcccccchHHHHHHHhc-CchhHHH---------HHHHHcCCCCcHHHHHHHHHhhcCC--CHHHHHHHHHh
Q 025042 84 DAVCFDVDSTVCVDEGIDELAEFCG-AGKAVAE---------WTARAMGGSVPFEEALAARLSLFKP--SLSQVQDFLEK 151 (259)
Q Consensus 84 k~vvFD~DGTLt~~~~~~~l~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 151 (259)
.+|+||+||||++.+....+..... .+..... .......|.++..+........... ..+.+...+..
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGWQA 80 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3799999999998654332222211 1111111 1223334555555544433333321 22333332322
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042 152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA 230 (259)
Q Consensus 152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~ 230 (259)
....++||+.++|+.|+++|++++++|+......+.+... .++. .+|...+.. .....++|+++.
T Consensus 81 ~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~--~~fd~v~~s------------~~~~~~KP~p~~ 146 (199)
T PRK09456 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVR--AAADHIYLS------------QDLGMRKPEARI 146 (199)
T ss_pred HHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHH--HhcCEEEEe------------cccCCCCCCHHH
Confidence 2245899999999999999999999999987776655443 3443 333222111 011235789999
Q ss_pred HHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 231 VQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 231 v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
++..++++|+ ++++||||+..|+.+++.
T Consensus 147 ~~~~~~~~~~~p~~~l~vgD~~~di~aA~~ 176 (199)
T PRK09456 147 YQHVLQAEGFSAADAVFFDDNADNIEAANA 176 (199)
T ss_pred HHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 9999999998 899999999999998864
No 82
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.47 E-value=2.6e-13 Score=102.75 Aligned_cols=105 Identities=18% Similarity=0.181 Sum_probs=74.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC--CCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP--PENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~--~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
..++|++.++++.|+++|++++++|++.+..++.+++.+|+. .+.++...........-.+..........++|...+
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL 102 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence 578999999999999999999999999999999999999873 112332211000000000001111222236788999
Q ss_pred HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+.+.+.++. ++++++||+.+|++|++.
T Consensus 103 ~~~~~~~~~~~~~~~~igD~~~d~~~~~~ 131 (139)
T cd01427 103 LAALKLLGVDPEEVLMVGDSLNDIEMAKA 131 (139)
T ss_pred HHHHHHcCCChhhEEEeCCCHHHHHHHHH
Confidence 999998876 789999999999999875
No 83
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.47 E-value=7.1e-14 Score=106.27 Aligned_cols=114 Identities=21% Similarity=0.287 Sum_probs=92.0
Q ss_pred HHhccCcCEEEEeCCCcccccchHHHHHHHhc-CchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCC
Q 025042 77 LQLWRTADAVCFDVDSTVCVDEGIDELAEFCG-AGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR 155 (259)
Q Consensus 77 ~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (259)
.+++++++.++||.||||||+.. ++. .+++++. ..
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~l------y~~~~Gee~Ka--------------------------------------Fn 37 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKL------YYDENGEEIKA--------------------------------------FN 37 (170)
T ss_pred hhhhhhceEEEEeccceeecCeE------EEcCCCceeee--------------------------------------ee
Confidence 46788999999999999999873 111 1111111 13
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR 235 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~ 235 (259)
.++|. -|+.|.+.|+++.|+||.....++.-++.||++ ++|.. -++|..+++.|+
T Consensus 38 v~DG~--Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG---------------------~~dK~~a~~~L~ 92 (170)
T COG1778 38 VRDGH--GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQG---------------------ISDKLAAFEELL 92 (170)
T ss_pred ccCcH--HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeec---------------------hHhHHHHHHHHH
Confidence 45565 678888999999999999999999999999997 66654 368999999999
Q ss_pred HHcCC--CeEEEEecCcccHHhhhcC
Q 025042 236 KAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 236 ~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
+++++ ++|.|+||..||+|+++.|
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~v 118 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKV 118 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHc
Confidence 99998 8999999999999999864
No 84
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.47 E-value=1.1e-12 Score=108.02 Aligned_cols=92 Identities=13% Similarity=0.083 Sum_probs=65.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcccc--HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHM--INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA 230 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~--~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~ 230 (259)
...++||+.++|+.|+++|++++++|++.... .......+++. .+|...+..+ .....++.+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~--~~fd~v~~s~------------~~~~~KP~p~~ 157 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM--ALFDAVVESC------------LEGLRKPDPRI 157 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH--hhCCEEEEee------------ecCCCCCCHHH
Confidence 45789999999999999999999999986544 22223334543 3333221100 01124678889
Q ss_pred HHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 231 VQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 231 v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
++..++++|+ ++++||||+..|+.+++.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~ 187 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAA 187 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHH
Confidence 9999999998 789999999999999875
No 85
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.46 E-value=9.3e-13 Score=102.97 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=70.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
....||+.++++.|+++|++++++|+..+..+..+.+.+ +. ..|..... .+... ++++++.+..
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~--~~f~~i~~------------~~~~~-~Kp~~~~~~~ 126 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG--DYFDLILG------------SDEFG-AKPEPEIFLA 126 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH--hcCcEEEe------------cCCCC-CCcCHHHHHH
Confidence 456799999999999999999999999999999888876 53 33332211 01112 5778999999
Q ss_pred HHHHcCC-CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY-KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~-~~v~~vGDg~ND~~al~~ 258 (259)
+++++|+ .+++||||+.+|+.+++.
T Consensus 127 ~~~~~~~~~~~l~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 127 ALESLGLPPEVLHVGDNLNDIEGARN 152 (154)
T ss_pred HHHHcCCCCCEEEEeCCHHHHHHHHH
Confidence 9999987 589999999999999875
No 86
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.44 E-value=1.2e-12 Score=104.85 Aligned_cols=90 Identities=17% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|+++|++++++|+..... ..+..++|+. ..|...+.. +....+++++..++.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~--~~f~~i~~~------------~~~~~~KP~~~~~~~ 148 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR--DLFDVVIFS------------GDVGRGKPDPDIYLL 148 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH--HHCCEEEEc------------CCCCCCCCCHHHHHH
Confidence 4789999999999999999999999998887 6666668885 444332211 011235778899999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++++|+ ++++||||+..|+.+++.
T Consensus 149 ~~~~~~~~~~~~~~vgD~~~di~aA~~ 175 (183)
T TIGR01509 149 ALKKLGLKPEECLFVDDSPAGIEAAKA 175 (183)
T ss_pred HHHHcCCCcceEEEEcCCHHHHHHHHH
Confidence 9999887 899999999999999875
No 87
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.42 E-value=1.9e-12 Score=104.42 Aligned_cols=92 Identities=16% Similarity=0.218 Sum_probs=70.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..+.||+.++|+.|+ .+++++|+.....+..+++.+|+. .+|...+..++ .......++|+++.++.
T Consensus 83 ~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~--~~fd~i~~~~~--------~~~~~~~~KP~p~~~~~ 149 (184)
T TIGR01993 83 LKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE--DCFDGIFCFDT--------ANPDYLLPKPSPQAYEK 149 (184)
T ss_pred CCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH--hhhCeEEEeec--------ccCccCCCCCCHHHHHH
Confidence 458899999999997 478999999999999999999996 55544322111 11000014778899999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.++++|+ ++++||||+..|+.+++.
T Consensus 150 ~~~~~~~~~~~~l~vgD~~~di~aA~~ 176 (184)
T TIGR01993 150 ALREAGVDPERAIFFDDSARNIAAAKA 176 (184)
T ss_pred HHHHhCCCccceEEEeCCHHHHHHHHH
Confidence 9999988 789999999999999875
No 88
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.41 E-value=8.9e-13 Score=102.57 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE 219 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~ 219 (259)
.++||+.++|+.|+++|++++++|+..+ ..+..+++++|+.....|.... ...+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----------~~~~ 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPH-----------HPAD 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCC-----------CCCC
Confidence 4789999999999999999999999764 3455677888885211222110 0001
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.....+++++.++.+++++|+ ++++||||+..|+.+++.
T Consensus 96 ~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~ 136 (147)
T TIGR01656 96 NCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARN 136 (147)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence 111247899999999999998 789999999999999875
No 89
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.40 E-value=3.5e-12 Score=97.25 Aligned_cols=86 Identities=17% Similarity=0.167 Sum_probs=69.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCc--------cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGF--------RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 226 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~--------~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 226 (259)
.++|++.++|++|++.|++++++|+.. ...++.+++.+++. ..+.. . .+ ..+++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~-~--------~~-------~~~KP 86 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLY-A--------CP-------HCRKP 86 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEE-E--------CC-------CCCCC
Confidence 578999999999999999999999988 67788889999985 21111 0 01 12467
Q ss_pred hHHHHHHHHHHc-CC--CeEEEEec-CcccHHhhhc
Q 025042 227 KAAAVQQIRKAH-AY--KVLAMIGD-GATDLEVSIF 258 (259)
Q Consensus 227 K~~~v~~l~~~~-g~--~~v~~vGD-g~ND~~al~~ 258 (259)
|++.++.+++++ ++ ++++|||| ..+|+.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~ 122 (132)
T TIGR01662 87 KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKR 122 (132)
T ss_pred ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHH
Confidence 899999999999 47 89999999 7999999875
No 90
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.39 E-value=4.3e-12 Score=126.22 Aligned_cols=165 Identities=19% Similarity=0.230 Sum_probs=103.1
Q ss_pred HhccCcCEEEEeCCCcccccchHH-----HHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhc--CC-CHH----HH
Q 025042 78 QLWRTADAVCFDVDSTVCVDEGID-----ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLS----QV 145 (259)
Q Consensus 78 e~~~~~k~vvFD~DGTLt~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~----~i 145 (259)
+.++++++|+||+||||++.+... .+.+..+.......+. .... ....+.+....... .+ ..+ .+
T Consensus 70 ~~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~-~~~G--~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 146 (1057)
T PLN02919 70 EEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFV-PFMG--TGEANFLGGVASVKGVKGFDPDAAKKRF 146 (1057)
T ss_pred CcCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHH-HHhC--CCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 346789999999999999976322 2223333222112221 2211 12222222211111 11 111 11
Q ss_pred -HHHHHh----CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042 146 -QDFLEK----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP 220 (259)
Q Consensus 146 -~~~~~~----~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~ 220 (259)
+.+... ....++||+.++|++|+++|++++|+|+.....++..++++|++. .+|...+.. +.
T Consensus 147 ~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~-~~Fd~iv~~------------~~ 213 (1057)
T PLN02919 147 FEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPL-SMFDAIVSA------------DA 213 (1057)
T ss_pred HHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCCh-hHCCEEEEC------------cc
Confidence 112111 123479999999999999999999999999999999999999851 223322111 11
Q ss_pred CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
...++++++.+...++++|+ ++++||||+.+|+.+++.
T Consensus 214 ~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~ 253 (1057)
T PLN02919 214 FENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA 253 (1057)
T ss_pred cccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH
Confidence 12357889999999999998 889999999999999875
No 91
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.38 E-value=4.9e-12 Score=105.53 Aligned_cols=154 Identities=14% Similarity=0.132 Sum_probs=89.6
Q ss_pred ccCCCCCCCHHHHH-hccCcC--EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC
Q 025042 65 GRSENTLPSKEVLQ-LWRTAD--AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS 141 (259)
Q Consensus 65 ~~~g~~v~~~~~~e-~~~~~k--~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (259)
....|-|-|-+-++ .+...+ +|+||+||||+++...- ..+.......-.. +..+. .+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~-~l~g~-~~w------------- 102 (237)
T TIGR01672 42 EQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGF----WRGKKTFSPGSED-YLKNQ-VFW------------- 102 (237)
T ss_pred ccCCeeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHH----hCCcccCCHHHhh-hhcCh-HHH-------------
Confidence 44456666655554 565443 99999999999976422 1221110000000 00000 111
Q ss_pred HHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCC----ccccHHHHHHHcCCCCCcEeecceeecCCCceecccC
Q 025042 142 LSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG----FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA 217 (259)
Q Consensus 142 ~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~----~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~ 217 (259)
+.+.+.... ...+.+++.++|++++++|++++++|+. .+.+++.+++.+|++ ++|...+ .+...
T Consensus 103 -~~~~~~~~~-~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~--~~f~~i~--------~~d~~ 170 (237)
T TIGR01672 103 -EKVNNGWDE-FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP--AMNPVIF--------AGDKP 170 (237)
T ss_pred -HHHHHhccc-CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc--hheeEEE--------CCCCC
Confidence 111111111 2356677999999999999999999997 666888999999997 5554322 11111
Q ss_pred CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 218 NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 218 ~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
. .+ |.+.. .+.+++| .++||||+.||+.+++.
T Consensus 171 ~----~~--Kp~~~-~~l~~~~--i~i~vGDs~~DI~aAk~ 202 (237)
T TIGR01672 171 G----QY--QYTKT-QWIQDKN--IRIHYGDSDNDITAAKE 202 (237)
T ss_pred C----CC--CCCHH-HHHHhCC--CeEEEeCCHHHHHHHHH
Confidence 1 11 22222 2345555 48999999999998864
No 92
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.38 E-value=5.4e-12 Score=100.75 Aligned_cols=84 Identities=12% Similarity=0.095 Sum_probs=66.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+ +++++|++....++.+++++|+. .+|...+.. +....++|+++..+.
T Consensus 89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~v~~~------------~~~~~~KP~p~~f~~ 147 (175)
T TIGR01493 89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP--WYFDRAFSV------------DTVRAYKPDPVVYEL 147 (175)
T ss_pred CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH--HHHhhhccH------------hhcCCCCCCHHHHHH
Confidence 568999999998 37899999999999999999986 555432211 111235778899999
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.+++.|+ ++|+||||+..|+.+++.
T Consensus 148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 148 VFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 9999898 899999999999999875
No 93
>PRK08238 hypothetical protein; Validated
Probab=99.36 E-value=8.4e-12 Score=114.22 Aligned_cols=146 Identities=17% Similarity=0.188 Sum_probs=94.4
Q ss_pred CEEEEeCCCcccccchHHHHHHHhcCchhHHHH--HHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042 84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEW--TARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID 161 (259)
Q Consensus 84 k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~ 161 (259)
.-++||+||||+.+++..+.....-...+...+ ......+...+.+.+.. ..+ +.....+++|++.
T Consensus 11 ~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~----~~~--------~d~~~lp~~pga~ 78 (479)
T PRK08238 11 LPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLAR----RVD--------LDVATLPYNEEVL 78 (479)
T ss_pred CCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHh----hcC--------CChhhCCCChhHH
Confidence 369999999999998877665543322221111 11111222111111111 000 0111235789999
Q ss_pred HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCC
Q 025042 162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK 241 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~ 241 (259)
+++++++++|++++++|+..+..++.+++++|+ .+.+++... ...+.|++|.+.+++...+ +
T Consensus 79 e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl-Fd~Vigsd~--------------~~~~kg~~K~~~l~~~l~~---~ 140 (479)
T PRK08238 79 DYLRAERAAGRKLVLATASDERLAQAVAAHLGL-FDGVFASDG--------------TTNLKGAAKAAALVEAFGE---R 140 (479)
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC-CCEEEeCCC--------------ccccCCchHHHHHHHHhCc---c
Confidence 999999999999999999999999999999997 225555421 0124567788877655443 4
Q ss_pred eEEEEecCcccHHhhhcC
Q 025042 242 VLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 242 ~v~~vGDg~ND~~al~~v 259 (259)
.+.|+||+.+|+|+++.+
T Consensus 141 ~~~yvGDS~~Dlp~~~~A 158 (479)
T PRK08238 141 GFDYAGNSAADLPVWAAA 158 (479)
T ss_pred CeeEecCCHHHHHHHHhC
Confidence 588999999999999764
No 94
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.35 E-value=1.1e-11 Score=100.94 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=63.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|++|++.+ +.+++|+..........+.+++. .+|.... +..+.+.. .++|++.+..
T Consensus 73 ~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~--~~f~~~f----~~i~~~~~-------~~~kp~~~~~ 138 (197)
T PHA02597 73 LSAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLN--ALFPGAF----SEVLMCGH-------DESKEKLFIK 138 (197)
T ss_pred ccCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHH--HhCCCcc----cEEEEecc-------CcccHHHHHH
Confidence 568999999999999874 67778887776666677788775 3332110 00011111 1357888998
Q ss_pred HHHHcCCCeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.++++|-++++||||+.+|+.+++.
T Consensus 139 a~~~~~~~~~v~vgDs~~di~aA~~ 163 (197)
T PHA02597 139 AKEKYGDRVVCFVDDLAHNLDAAHE 163 (197)
T ss_pred HHHHhCCCcEEEeCCCHHHHHHHHH
Confidence 8888874468899999999998864
No 95
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.34 E-value=2.8e-11 Score=101.63 Aligned_cols=85 Identities=18% Similarity=0.214 Sum_probs=64.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|+.|++. ++++++|+++.. .+.+|+. .+|...+..+ .....+++++.+..
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~--~~fd~i~~~~------------~~~~~KP~p~~~~~ 171 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLG--DYFEFVLRAG------------PHGRSKPFSDMYHL 171 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcH--HhhceeEecc------------cCCcCCCcHHHHHH
Confidence 57889999999999975 889999998765 3667875 5554332111 11235788999999
Q ss_pred HHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDG-ATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg-~ND~~al~~ 258 (259)
.++++|+ ++++||||+ ..|+.+++.
T Consensus 172 a~~~~~~~~~~~~~VGD~~~~Di~~A~~ 199 (238)
T PRK10748 172 AAEKLNVPIGEILHVGDDLTTDVAGAIR 199 (238)
T ss_pred HHHHcCCChhHEEEEcCCcHHHHHHHHH
Confidence 9998887 789999999 599998864
No 96
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.33 E-value=2.1e-11 Score=97.83 Aligned_cols=170 Identities=16% Similarity=0.215 Sum_probs=116.8
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCC---CHHHHHHHHHhCCCCCCc
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP---SLSQVQDFLEKRPPRLSP 158 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~p 158 (259)
+--+++||+|-|+++.++-..+...++.......+...+.. --+.+++.+.+..+.+ ..+++.+.+.. .++.|
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~--~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~--iP~~P 87 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPK--GFWNELMDRVFKELHEQGVRIAEIKQVLRS--IPIVP 87 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhccc--chHHHHHHHHHHHHHHcCCCHHHHHHHHhc--CCCCc
Confidence 33589999999999988766666666655443444333322 1256677766666653 34555566665 57899
Q ss_pred cHHHHHHHHHHCCC-cEEEEeCCccccHHHHHHHcCCCC--CcEeecceeecCCCceecccCC----CCCc-CCCChHHH
Q 025042 159 GIDELVKKLKANNK-NVYLISGGFRHMINPIASVLGIPP--ENIFANQLLFKSSGEFLGFDAN----EPTS-RSGGKAAA 230 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~-~v~ivTg~~~~~~~~i~~~lgi~~--~~~~~~~l~~~~~~~~~g~~~~----~~~~-~~~~K~~~ 230 (259)
|+.++++.+++.|. .+.|+|..+..+++.+++.+|+.. ..+|.+--.++++|.+.-...- ...| ..-.|...
T Consensus 88 gmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~V 167 (256)
T KOG3120|consen 88 GMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLV 167 (256)
T ss_pred cHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHH
Confidence 99999999999996 799999999999999999999851 1344454456677765422211 1112 12368888
Q ss_pred HHHHHHHc---CC--CeEEEEecCcccHHh
Q 025042 231 VQQIRKAH---AY--KVLAMIGDGATDLEV 255 (259)
Q Consensus 231 v~~l~~~~---g~--~~v~~vGDg~ND~~a 255 (259)
+.++.... |+ ++.+|+|||.||+-.
T Consensus 168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP 197 (256)
T KOG3120|consen 168 LDELVASQLKDGVRYERLIYVGDGANDFCP 197 (256)
T ss_pred HHHHHHHHhhcCCceeeEEEEcCCCCCcCc
Confidence 88887653 33 699999999999854
No 97
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.32 E-value=1.3e-11 Score=99.39 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE 219 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~ 219 (259)
.++||+.++|++|+++|++++++|++.. .....+++.+|+..+.++.... ...+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~-----------~~~~ 97 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH-----------HPED 97 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC-----------CCCC
Confidence 5789999999999999999999998763 1223345566653223332110 0001
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.....++++..+...++++|+ ++++||||+.+|+.+++.
T Consensus 98 ~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~ 138 (181)
T PRK08942 98 GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA 138 (181)
T ss_pred CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH
Confidence 112357889999999999987 899999999999999875
No 98
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=99.31 E-value=2.1e-11 Score=113.66 Aligned_cols=103 Identities=22% Similarity=0.246 Sum_probs=74.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc-E--------eecceeec-CCCc------------
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN-I--------FANQLLFK-SSGE------------ 211 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~-~--------~~~~l~~~-~~~~------------ 211 (259)
.+++|+++++|+.|.+.+++++|+|||+.-++-++++++|+..-. . -++++.+. -||.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~ 753 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKT 753 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccch
Confidence 489999999999999999999999999999999999999974210 0 01111110 0010
Q ss_pred ---------eecc-----------------cCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 212 ---------FLGF-----------------DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 212 ---------~~g~-----------------~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
++|. .+......|++|--+|..+++. | ..++|.|||.||..|++.
T Consensus 754 ~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-G-y~TLMCGDGTNDVGALK~ 824 (1160)
T KOG0209|consen 754 LLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-G-YVTLMCGDGTNDVGALKQ 824 (1160)
T ss_pred hhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-C-eEEEEecCCCcchhhhhh
Confidence 0111 1112445688999999999776 7 599999999999999985
No 99
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.28 E-value=6.2e-11 Score=108.75 Aligned_cols=96 Identities=22% Similarity=0.250 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
.++|++.+.+ +++|. .+++|+..+..+++++++ +|++ .+.+++++.+.+|.++|...+...+.++.|...+++
T Consensus 110 ~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid--~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~ 183 (497)
T PLN02177 110 DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGAD--KVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLK 183 (497)
T ss_pred hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCC--EEEecccEECcCCEEeeeecCCCCCccHHHHHHHHH
Confidence 3677766654 45675 499999999999999976 8997 899999998789999999887545677889998874
Q ss_pred HHHHcCC-CeEEEEecCcccHHhhhcC
Q 025042 234 IRKAHAY-KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 234 l~~~~g~-~~v~~vGDg~ND~~al~~v 259 (259)
.. |. ...+++|||.||.||++.+
T Consensus 184 ~~---g~~~~~~aYgDS~sD~plL~~a 207 (497)
T PLN02177 184 EF---GDALPDLGLGDRETDHDFMSIC 207 (497)
T ss_pred Hh---CCCCceEEEECCccHHHHHHhC
Confidence 33 32 2338999999999999865
No 100
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.28 E-value=8.7e-12 Score=98.36 Aligned_cols=94 Identities=16% Similarity=0.175 Sum_probs=69.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN 218 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~ 218 (259)
..++||+.++|++|+++|++++++|+. ....+..+++.+|+..+.++... ....
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~-----------~~~~ 96 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICP-----------HFPD 96 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECC-----------CCCC
Confidence 357899999999999999999999985 24456777888888422121100 0000
Q ss_pred CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+.....++|...++.+.+++++ ++++||||+.+|+.+++.
T Consensus 97 ~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~ 138 (161)
T TIGR01261 97 DNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN 138 (161)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH
Confidence 1112347899999999999887 789999999999999875
No 101
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=99.28 E-value=1.8e-12 Score=121.01 Aligned_cols=60 Identities=12% Similarity=0.200 Sum_probs=55.1
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCccccc
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVD 97 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~ 97 (259)
+.+-|+++|+|++.-++-+-.+-+.+.++...++|.=++.|.+....+++.|++||||.+
T Consensus 321 i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqn 380 (1019)
T KOG0203|consen 321 IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 380 (1019)
T ss_pred heeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEec
Confidence 788899999999998877777778899999999999999999999999999999999776
No 102
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=99.27 E-value=1.8e-11 Score=111.75 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEee--cceeecCCCceecc--------cCCCCCcC
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFA--NQLLFKSSGEFLGF--------DANEPTSR 223 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~--~~l~~~~~~~~~g~--------~~~~~~~~ 223 (259)
+++|.+..+.+.+....|..+-|+|||.......-.+++|..- +.|. +.+..+.++...+. ..+.....
T Consensus 491 dpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgt-nmypss~llG~~~~~~~~~~~v~elie~adgfAgVf 569 (942)
T KOG0205|consen 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVF 569 (942)
T ss_pred CCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhcccc-CcCCchhhccCCCCCCCCCCcHHHHhhhccCccccC
Confidence 4789999999999999999999999999988888888888752 2332 12222222222221 12223345
Q ss_pred CCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 224 SGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
|++|-++++.++++ + ..|.|.|||.||+|+++.
T Consensus 570 pehKy~iV~~Lq~r-~-hi~gmtgdgvndapaLKk 602 (942)
T KOG0205|consen 570 PEHKYEIVKILQER-K-HIVGMTGDGVNDAPALKK 602 (942)
T ss_pred HHHHHHHHHHHhhc-C-ceecccCCCcccchhhcc
Confidence 89999999999998 5 689999999999999975
No 103
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.27 E-value=3.9e-11 Score=96.15 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=67.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE 219 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~ 219 (259)
.++||+.++|++|+++|++++++|+... .....++..+++..+.++.......+.+ ...+
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~-----~~~~ 100 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVE-----EFRQ 100 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccc-----cccC
Confidence 5789999999999999999999999874 1223455556654323332210000000 0001
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.....++++..+...++++|+ ++++||||+.+|+.+++.
T Consensus 101 ~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~ 141 (176)
T TIGR00213 101 VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA 141 (176)
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH
Confidence 112357899999999999998 899999999999999875
No 104
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.26 E-value=4.7e-11 Score=101.71 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=36.0
Q ss_pred CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
+....+.+|+.+++.+++++|+ ++|++||||.||++|++.+
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~a 224 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVA 224 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhc
Confidence 4455667899999999999998 6899999999999999864
No 105
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.24 E-value=7.9e-11 Score=97.30 Aligned_cols=38 Identities=18% Similarity=0.381 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
..+.+|...++.+++++|+ +++++||||.||++|++.+
T Consensus 143 ~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~a 182 (215)
T TIGR01487 143 KKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVV 182 (215)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhC
Confidence 4467899999999999998 6899999999999999864
No 106
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.24 E-value=3.7e-11 Score=91.23 Aligned_cols=85 Identities=16% Similarity=0.122 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCC-ccccHHHHHHHcC-------CCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGG-FRHMINPIASVLG-------IPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 226 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~-~~~~~~~i~~~lg-------i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 226 (259)
.++||+.++|++|+++|++++++|+. ....+..+++.++ +. .+|..... + ...+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~--~~f~~~~~--------~--------~~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLA--EYFDPLTI--------G--------YWLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhH--hhhhhhhh--------c--------CCCc
Confidence 46799999999999999999999999 7877888888887 43 44433210 0 1246
Q ss_pred hHHHHHHHHHHcC--C--CeEEEEecCcccHHhhh
Q 025042 227 KAAAVQQIRKAHA--Y--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 227 K~~~v~~l~~~~g--~--~~v~~vGDg~ND~~al~ 257 (259)
|++.+...++++| + ++++||||+..|+...+
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 8888999999989 7 89999999999987765
No 107
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.22 E-value=1e-10 Score=100.06 Aligned_cols=40 Identities=18% Similarity=0.106 Sum_probs=35.3
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
....+.+|+.+++.+++.+|+ +++++||||.||++|++.+
T Consensus 182 I~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~a 223 (272)
T PRK15126 182 VLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSV 223 (272)
T ss_pred eecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHc
Confidence 444556899999999999998 8999999999999999864
No 108
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.21 E-value=6.1e-12 Score=100.11 Aligned_cols=93 Identities=11% Similarity=0.147 Sum_probs=65.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCC-ccccHHHHHHHcCCCC-C------cEeecceeecCCCceecccCCCCCcCCC
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGG-FRHMINPIASVLGIPP-E------NIFANQLLFKSSGEFLGFDANEPTSRSG 225 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~-~~~~~~~i~~~lgi~~-~------~~~~~~l~~~~~~~~~g~~~~~~~~~~~ 225 (259)
..++||+.++|+.|+++|+++.++|+. ....++.+++.+|+.. . ++|...+ .+.. ...++
T Consensus 44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv--------~~~~----~~~~k 111 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRI--------EIYK----PNKAK 111 (174)
T ss_pred EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeee--------eccC----CchHH
Confidence 578999999999999999999999987 8888899999998741 0 2222211 1111 01122
Q ss_pred ChHHHHHHHHHHc--CC--CeEEEEecCcccHHhhhc
Q 025042 226 GKAAAVQQIRKAH--AY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 226 ~K~~~v~~l~~~~--g~--~~v~~vGDg~ND~~al~~ 258 (259)
+-..+++.+.+.+ |+ ++++||||+..|+.+++.
T Consensus 112 p~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~ 148 (174)
T TIGR01685 112 QLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWG 148 (174)
T ss_pred HHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHH
Confidence 3344566665554 45 899999999999999864
No 109
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.21 E-value=1e-10 Score=97.44 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=33.7
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
..+.+|+.+++.+++++|+ +++++||||.||++|++.+
T Consensus 153 ~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~a 192 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVA 192 (230)
T ss_pred eCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhc
Confidence 3456799999999999998 7899999999999999864
No 110
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.21 E-value=1.3e-10 Score=92.15 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=66.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccc------------cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRH------------MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR 223 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~------------~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~ 223 (259)
++||+.++|++|+++|++++++|+.... .++.+++++|++ . +. .+ ..+ ....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~-~~-ii-~~~-----------~~~~ 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--I-QV-LA-ATH-----------AGLY 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--E-EE-EE-ecC-----------CCCC
Confidence 6799999999999999999999987653 356788999985 2 11 11 000 0012
Q ss_pred CCChHHHHHHHHHHcC--C--CeEEEEecCc--------ccHHhhhc
Q 025042 224 SGGKAAAVQQIRKAHA--Y--KVLAMIGDGA--------TDLEVSIF 258 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g--~--~~v~~vGDg~--------ND~~al~~ 258 (259)
+++++..++.+.+++| + ++++||||+. +|+.+++.
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~ 153 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN 153 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH
Confidence 4678889999999888 6 7899999996 69999875
No 111
>PRK10976 putative hydrolase; Provisional
Probab=99.18 E-value=2.3e-10 Score=97.53 Aligned_cols=40 Identities=25% Similarity=0.311 Sum_probs=34.8
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
.+....+|+.+++.+++.+|+ +++++||||.||++|++.+
T Consensus 184 I~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~a 225 (266)
T PRK10976 184 VMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMA 225 (266)
T ss_pred EEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHc
Confidence 334456899999999999998 8999999999999999864
No 112
>PRK06769 hypothetical protein; Validated
Probab=99.17 E-value=2.4e-10 Score=91.32 Aligned_cols=91 Identities=19% Similarity=0.167 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccc--------cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRH--------MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 226 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~--------~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 226 (259)
.++||+.++|++|+++|++++++|+.... .....++.+|++ .++..... ..+.....++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~-----------~~~~~~~~KP 94 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYLCPHK-----------HGDGCECRKP 94 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEECcCC-----------CCCCCCCCCC
Confidence 57899999999999999999999987642 123335667775 44432110 0011123578
Q ss_pred hHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 227 KAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 227 K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
++..+++.+++++. ++++||||+.+|+.+++.
T Consensus 95 ~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~ 128 (173)
T PRK06769 95 STGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAK 128 (173)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH
Confidence 99999999999887 799999999999999875
No 113
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.16 E-value=7.8e-10 Score=91.85 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=71.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++|++.++|+.++++ ++++++|++....+...++++|+. .+|...+..++-| .++|..++.+.
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~--~~Fd~v~~s~~~g------------~~KP~~~~f~~ 162 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL--DYFDAVFISEDVG------------VAKPDPEIFEY 162 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh--hhhheEEEecccc------------cCCCCcHHHHH
Confidence 57899999999999988 999999999999999999999986 6665554332211 25678889999
Q ss_pred HHHHcCC--CeEEEEecCcc-cHHhhh
Q 025042 234 IRKAHAY--KVLAMIGDGAT-DLEVSI 257 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~N-D~~al~ 257 (259)
.++++|+ ++++||||+.. |+..++
T Consensus 163 ~~~~~g~~p~~~l~VgD~~~~di~gA~ 189 (229)
T COG1011 163 ALEKLGVPPEEALFVGDSLENDILGAR 189 (229)
T ss_pred HHHHcCCCcceEEEECCChhhhhHHHH
Confidence 9999998 78999999764 635444
No 114
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.15 E-value=2.7e-10 Score=90.75 Aligned_cols=81 Identities=19% Similarity=0.352 Sum_probs=66.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCc-cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGF-RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~-~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
.++|++.++|+.|+++|++++++|+.. ...++.+.+.+|+. .+.. ..++++..+..
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~---~~~~--------------------~~KP~p~~~~~ 99 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP---VLPH--------------------AVKPPGCAFRR 99 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE---EEcC--------------------CCCCChHHHHH
Confidence 467899999999999999999999988 67777788888874 2111 13678889999
Q ss_pred HHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
+++++|+ ++++||||+. .|+.+++.
T Consensus 100 ~l~~~~~~~~~~l~IGDs~~~Di~aA~~ 127 (170)
T TIGR01668 100 AHPEMGLTSEQVAVVGDRLFTDVMGGNR 127 (170)
T ss_pred HHHHcCCCHHHEEEECCcchHHHHHHHH
Confidence 9999888 7899999998 79999875
No 115
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.14 E-value=7.3e-11 Score=87.11 Aligned_cols=83 Identities=25% Similarity=0.453 Sum_probs=73.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
-.+++.+.+.+++|.+. +++++.|||...+....++..|++.+.+|+. ..++.|.++++.
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~-------------------a~~e~K~~ii~e 88 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAG-------------------ADPEMKAKIIRE 88 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecc-------------------cCHHHHHHHHHH
Confidence 46889999999999999 9999999999999999999999986566654 246889999999
Q ss_pred HHHHcCCCeEEEEecCcccHHhhhc
Q 025042 234 IRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
|.+++ ..|+|||||.||.+|++.
T Consensus 89 Lkk~~--~k~vmVGnGaND~laLr~ 111 (152)
T COG4087 89 LKKRY--EKVVMVGNGANDILALRE 111 (152)
T ss_pred hcCCC--cEEEEecCCcchHHHhhh
Confidence 99874 799999999999999975
No 116
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.14 E-value=7.5e-11 Score=111.93 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=50.9
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCccccc
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVD 97 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~ 97 (259)
.++--.-+|-++|...+-.-..+.+|+.+.||-=-|++.+-..++++++|||||||||++
T Consensus 423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEd 482 (1140)
T KOG0208|consen 423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTED 482 (1140)
T ss_pred hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCccccc
Confidence 555566778888887776666778999999999999999988999999999999999875
No 117
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.11 E-value=5.4e-10 Score=95.42 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=35.4
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
....+.+|+.+++.+++.+|+ +++++||||.||++|++.+
T Consensus 190 I~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~a 231 (270)
T PRK10513 190 ILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYA 231 (270)
T ss_pred EeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhC
Confidence 444567899999999999998 7999999999999999864
No 118
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.09 E-value=2.2e-09 Score=88.85 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=70.5
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc---CCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL---GIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA 229 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l---gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~ 229 (259)
...++||+.++|++|+++|++++|+|++.....+.+.+++ ++. .+|...+.. ...++++++
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~--~~f~~~fd~--------------~~g~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT--PYFSGYFDT--------------TVGLKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh--hhcceEEEe--------------CcccCCCHH
Confidence 3469999999999999999999999999888878777775 343 223221100 012477899
Q ss_pred HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.+.++++++|+ ++++||||+..|+.+++.
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~ 187 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSDIINELDAARK 187 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeCCHHHHHHHHH
Confidence 99999999998 789999999999999875
No 119
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.07 E-value=1.2e-09 Score=90.60 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=34.8
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
....+.+|...++.+++++|+ +++++|||+.||++|++.+
T Consensus 143 i~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~a 184 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVP 184 (225)
T ss_pred EeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhc
Confidence 334457899999999999998 7899999999999999863
No 120
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.05 E-value=1.1e-09 Score=96.52 Aligned_cols=93 Identities=17% Similarity=0.200 Sum_probs=66.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccC-
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA- 217 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~- 217 (259)
..++||+.++|++|+++|++++|+|+. ....+..+++.+|+..+.++.. ...
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~------------~~~~ 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLIC------------PHFP 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEe------------CCcC
Confidence 468999999999999999999999994 1333555667777742111110 000
Q ss_pred CCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 218 NEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 218 ~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.+.....++|+..+..+.+++++ ++++||||+.+|+.+++.
T Consensus 97 sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~ 139 (354)
T PRK05446 97 EDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN 139 (354)
T ss_pred cccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence 11112347899999999888877 799999999999999875
No 121
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.05 E-value=1.3e-09 Score=91.07 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=60.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCC----ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGG----FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA 229 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~----~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~ 229 (259)
..++||+.++|+.|+++|++++++|+. ...+++.+++.+|++.++.|...+ .+.. ..-.+|..
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil--------~gd~-----~~K~~K~~ 179 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIF--------AGDK-----PGQYTKTQ 179 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEE--------cCCC-----CCCCCHHH
Confidence 568899999999999999999999994 455778888889995335553322 1111 01124544
Q ss_pred HHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 230 AVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 230 ~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.+ ++++ .++||||+.+|+.+++.
T Consensus 180 ~l----~~~~--i~I~IGDs~~Di~aA~~ 202 (237)
T PRK11009 180 WL----KKKN--IRIFYGDSDNDITAARE 202 (237)
T ss_pred HH----HhcC--CeEEEcCCHHHHHHHHH
Confidence 33 3454 59999999999998864
No 122
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.03 E-value=2.2e-09 Score=89.76 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=34.3
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
..+.+|+.+++.+++.+|+ +++++|||+.||++|++.+
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~ 221 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELA 221 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHS
T ss_pred eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhc
Confidence 4467899999999999998 8999999999999999864
No 123
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.02 E-value=6.3e-09 Score=88.21 Aligned_cols=129 Identities=15% Similarity=0.241 Sum_probs=85.5
Q ss_pred cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccH
Q 025042 81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI 160 (259)
Q Consensus 81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~ 160 (259)
.+..+|+||+|+|+.++........ .++. + .+.+...++.......+.||+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~---------------~~~~-~-------------~~~~~w~~wv~~~~a~~ipGA 123 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQV---------------LNNK-P-------------FDPETWDKWVQAAQAKPVAGA 123 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHh---------------cCCC-c-------------CCHHHHHHHHHcCCCCcCccH
Confidence 3457999999999988653211000 0100 0 122334455555556789999
Q ss_pred HHHHHHHHHCCCcEEEEeCCccccH---HHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042 161 DELVKKLKANNKNVYLISGGFRHMI---NPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA 237 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg~~~~~~---~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~ 237 (259)
.++++.|+++|++++++|+...... ...++.+|++ .++...+...+ ...+|....+.+.+.
T Consensus 124 ~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~--~~~~d~lllr~--------------~~~~K~~rr~~I~~~ 187 (266)
T TIGR01533 124 LDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP--QADEEHLLLKK--------------DKSSKESRRQKVQKD 187 (266)
T ss_pred HHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC--CCCcceEEeCC--------------CCCCcHHHHHHHHhc
Confidence 9999999999999999999765443 3667788996 32222222111 124688888888776
Q ss_pred cCCCeEEEEecCcccHHhh
Q 025042 238 HAYKVLAMIGDGATDLEVS 256 (259)
Q Consensus 238 ~g~~~v~~vGDg~ND~~al 256 (259)
+ +-+++|||..+|+...
T Consensus 188 y--~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 188 Y--EIVLLFGDNLLDFDDF 204 (266)
T ss_pred C--CEEEEECCCHHHhhhh
Confidence 6 4699999999999654
No 124
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.01 E-value=1.9e-10 Score=98.26 Aligned_cols=89 Identities=16% Similarity=0.188 Sum_probs=55.2
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCc-----cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGF-----RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~-----~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
.++..++++.++..+..+.+.+... ....+.+.+.+++. ..+.. ....+....+.+|+..+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~------------~~~~ei~~~~~~K~~~l 204 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLE--CEWSW------------HDQVDIARKGNSKGKRL 204 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCce--EEEec------------CceEEEecCCCChHHHH
Confidence 3556667777666665555555432 12233344444542 11110 00112233456899999
Q ss_pred HHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 232 QQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
+.+++++|+ +++++||||.||++|++.+
T Consensus 205 ~~l~~~~gi~~~e~i~~GD~~NDi~m~~~a 234 (272)
T PRK10530 205 TQWVEAQGWSMKNVVAFGDNFNDISMLEAA 234 (272)
T ss_pred HHHHHHcCCCHHHeEEeCCChhhHHHHHhc
Confidence 999999998 7999999999999999863
No 125
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.00 E-value=4.2e-09 Score=90.16 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=35.4
Q ss_pred CCCcCCCChHHHHHHHHHHcCC-----CeEEEEecCcccHHhhhcC
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY-----KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~-----~~v~~vGDg~ND~~al~~v 259 (259)
+.+....+|+.+++.+++.+|+ ++|++||||.||++|++++
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~a 225 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVM 225 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhC
Confidence 3445567899999999999886 6899999999999999864
No 126
>PLN02811 hydrolase
Probab=98.99 E-value=5.5e-09 Score=86.65 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=65.9
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHH-HHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINP-IASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~-i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
...++||+.++|+.|+++|++++++|+..+..... ..+..++. ++|...+. +.. . ....++++++.+
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~--~~f~~i~~--------~~~-~-~~~~~KP~p~~~ 143 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF--SLMHHVVT--------GDD-P-EVKQGKPAPDIF 143 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH--hhCCEEEE--------CCh-h-hccCCCCCcHHH
Confidence 35789999999999999999999999987654443 33333443 33332211 000 0 011346788888
Q ss_pred HHHHHHcC---C--CeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHA---Y--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g---~--~~v~~vGDg~ND~~al~~ 258 (259)
....+++| + ++|+||||+..|+.+++.
T Consensus 144 ~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~ 175 (220)
T PLN02811 144 LAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN 175 (220)
T ss_pred HHHHHHhCCCCCCccceEEEeccHhhHHHHHH
Confidence 88888876 6 789999999999999875
No 127
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=98.99 E-value=9e-10 Score=110.39 Aligned_cols=106 Identities=20% Similarity=0.229 Sum_probs=77.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Ee--ec-ceee---------------------
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF--AN-QLLF--------------------- 206 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~--~~-~l~~--------------------- 206 (259)
.++++|+++++++.|++.|++++|+|||+.+++..++.+.|+-..+ .+ .. ....
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 708 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNN 708 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhh
Confidence 4589999999999999999999999999999999999999874211 11 00 0000
Q ss_pred --cCCC---ceeccc----------------------CCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042 207 --KSSG---EFLGFD----------------------ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 207 --~~~~---~~~g~~----------------------~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v 259 (259)
.... .++|.. ...-.+.|++|..+++.+++..| +.|+|+|||.||++|++.+
T Consensus 709 ~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~-~~vl~iGDG~ND~~mlk~A 787 (1057)
T TIGR01652 709 LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTG-KTTLAIGDGANDVSMIQEA 787 (1057)
T ss_pred hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCC-CeEEEEeCCCccHHHHhhc
Confidence 0000 011110 01234669999999999998756 7999999999999999863
No 128
>PLN02887 hydrolase family protein
Probab=98.98 E-value=4.5e-09 Score=98.21 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=35.0
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
++..+.+|+.+++.+++.+|+ ++|++||||.||++|++.+
T Consensus 501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~A 542 (580)
T PLN02887 501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLA 542 (580)
T ss_pred EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHC
Confidence 334456899999999999999 7999999999999999864
No 129
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=98.95 E-value=1.1e-09 Score=100.73 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=74.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCC-C---cEeecceeec------------CCC--ceec
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPP-E---NIFANQLLFK------------SSG--EFLG 214 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~-~---~~~~~~l~~~------------~~~--~~~g 214 (259)
++++.++++..++.||+.|++++|+|||.-+++..+++.-++-. . +++...-.-. .+. .+.|
T Consensus 656 EDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G 735 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDG 735 (1051)
T ss_pred HHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcC
Confidence 45788999999999999999999999999999999888766521 0 1221110000 000 0111
Q ss_pred cc---------------------CCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 215 FD---------------------ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 215 ~~---------------------~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
.. ...-.|.|.+|++.++.++++-| ..|++||||-||..|++.
T Consensus 736 ~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~-krvc~IGDGGNDVsMIq~ 799 (1051)
T KOG0210|consen 736 ESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG-KRVCAIGDGGNDVSMIQA 799 (1051)
T ss_pred chHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC-ceEEEEcCCCccchheee
Confidence 00 00124779999999999999988 899999999999999864
No 130
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.95 E-value=8.5e-09 Score=87.42 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=34.8
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
....+.+|...++.+++.+|+ +++++|||+.||++|++.+
T Consensus 182 I~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~ 223 (256)
T TIGR00099 182 ITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAA 223 (256)
T ss_pred ecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhC
Confidence 344466899999999999988 7999999999999999863
No 131
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.91 E-value=2.9e-09 Score=93.35 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH----cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV----LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~----lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
+++++.++|+.|+++|+.+.++|+.....+..++++ +++. ++|.... ...++|++.+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~--~~f~~~~-----------------~~~~pk~~~i 92 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA--EDFDARS-----------------INWGPKSESL 92 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH--HHeeEEE-----------------EecCchHHHH
Confidence 578999999999999999999999999999999998 8876 5554421 1246899999
Q ss_pred HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 232 QQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+++.+++|+ ++++||||+..|+.+.+.
T Consensus 93 ~~~~~~l~i~~~~~vfidD~~~d~~~~~~ 121 (320)
T TIGR01686 93 RKIAKKLNLGTDSFLFIDDNPAERANVKI 121 (320)
T ss_pred HHHHHHhCCCcCcEEEECCCHHHHHHHHH
Confidence 999999988 899999999999988764
No 132
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.88 E-value=2.2e-08 Score=85.79 Aligned_cols=38 Identities=18% Similarity=0.162 Sum_probs=32.8
Q ss_pred CcCCCChHHHHHHHHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042 221 TSRSGGKAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~v 259 (259)
.... +|..+++++++.+|+ +++++||||.||++|++.+
T Consensus 186 ~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~a 226 (273)
T PRK00192 186 LGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAA 226 (273)
T ss_pred eCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhC
Confidence 3445 899999999998876 6899999999999999864
No 133
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.87 E-value=2.8e-08 Score=84.54 Aligned_cols=36 Identities=22% Similarity=0.062 Sum_probs=30.8
Q ss_pred CCChHHHHHHHHHHcCCC----eEEEEecCcccHHhhhcC
Q 025042 224 SGGKAAAVQQIRKAHAYK----VLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~~----~v~~vGDg~ND~~al~~v 259 (259)
..+|.++++.|.+.++-. .++.+|||.||++||+++
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~ 245 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWS 245 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhC
Confidence 458999999999887642 799999999999999874
No 134
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.86 E-value=1.6e-08 Score=85.11 Aligned_cols=83 Identities=18% Similarity=0.249 Sum_probs=59.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHH--HHHHHcCCCCCc-EeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN--PIASVLGIPPEN-IFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~--~i~~~lgi~~~~-~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
.++||+.++|++|+++|++++++|+..+...+ ..++++|++ . .|...+. ...--...+
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~--~~~~~~Ii~-----------------s~~~~~~~l 84 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN--ADLPEMIIS-----------------SGEIAVQMI 84 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC--ccccceEEc-----------------cHHHHHHHH
Confidence 35799999999999999999999998877666 678899996 3 3333220 011112455
Q ss_pred HHHHHHcCC--CeEEEEecCcccHHhh
Q 025042 232 QQIRKAHAY--KVLAMIGDGATDLEVS 256 (259)
Q Consensus 232 ~~l~~~~g~--~~v~~vGDg~ND~~al 256 (259)
.+..++++. ++++++||+.+|+..+
T Consensus 85 ~~~~~~~~~~~~~~~~vGd~~~d~~~~ 111 (242)
T TIGR01459 85 LESKKRFDIRNGIIYLLGHLENDIINL 111 (242)
T ss_pred HhhhhhccCCCceEEEeCCcccchhhh
Confidence 555555554 6799999999988765
No 135
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.83 E-value=2.2e-08 Score=81.86 Aligned_cols=41 Identities=22% Similarity=0.170 Sum_probs=35.3
Q ss_pred CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
+....+.+|..+++.+++++++ +++++|||+.||++|++.+
T Consensus 156 ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~ 198 (204)
T TIGR01484 156 EVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVA 198 (204)
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHc
Confidence 3445567999999999999987 7899999999999999863
No 136
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.78 E-value=5.8e-08 Score=80.83 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHHcCC----CeEEEEecCcccHHhhhcC
Q 025042 224 SGGKAAAVQQIRKAHAY----KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~----~~v~~vGDg~ND~~al~~v 259 (259)
+.+|..+++.+++.+++ .++++|||+.||++|++.+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~a 218 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVV 218 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhC
Confidence 67899999999998865 4799999999999999864
No 137
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.76 E-value=2.6e-08 Score=86.43 Aligned_cols=98 Identities=16% Similarity=0.105 Sum_probs=69.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc-EeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN-IFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~-~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
..++|++.++++.|+++|++++++|+......+..++.+++. . +|......+....+.- ....+++++..+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~--~~~f~~i~~~~~~~~~~~-----~~~~~kp~p~~~~ 258 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT--DIWFDDLIGRPPDMHFQR-----EQGDKRPDDVVKE 258 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc--CCchhhhhCCcchhhhcc-----cCCCCCCcHHHHH
Confidence 578999999999999999999999999999999999999885 3 4433221110000000 0112355666666
Q ss_pred HHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY---KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~---~~v~~vGDg~ND~~al~~ 258 (259)
..+++.+. ++++||||+.+|+.+++.
T Consensus 259 ~~l~~~~~~~~~~~~~vgD~~~d~~~a~~ 287 (300)
T PHA02530 259 EIFWEKIAPKYDVLLAVDDRDQVVDMWRR 287 (300)
T ss_pred HHHHHHhccCceEEEEEcCcHHHHHHHHH
Confidence 66665554 689999999999999874
No 138
>PLN03190 aminophospholipid translocase; Provisional
Probab=98.76 E-value=1e-08 Score=102.94 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=74.8
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Ee-e--cc-------ee----------ec---
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF-A--NQ-------LL----------FK--- 207 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~-~--~~-------l~----------~~--- 207 (259)
.+++++++.++++.|++.|++++|+|||+..++..++...++-..+ .+ - +. +. ..
T Consensus 724 ~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 803 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGI 803 (1178)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccc
Confidence 3589999999999999999999999999999999999987763211 00 0 00 00 00
Q ss_pred -CC-------------CceecccC----------------------CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcc
Q 025042 208 -SS-------------GEFLGFDA----------------------NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGAT 251 (259)
Q Consensus 208 -~~-------------~~~~g~~~----------------------~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~N 251 (259)
.+ -.+.|... ..-.+.|.+|..+++.+++..+ ..|+|+|||.|
T Consensus 804 ~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~-~vtlaIGDGaN 882 (1178)
T PLN03190 804 SQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTS-DMTLAIGDGAN 882 (1178)
T ss_pred cccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCC-cEEEEECCCcc
Confidence 00 00111100 0124679999999999988755 68999999999
Q ss_pred cHHhhhcC
Q 025042 252 DLEVSIFI 259 (259)
Q Consensus 252 D~~al~~v 259 (259)
|++|++.+
T Consensus 883 Dv~mIq~A 890 (1178)
T PLN03190 883 DVSMIQMA 890 (1178)
T ss_pred hHHHHHhc
Confidence 99999863
No 139
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.73 E-value=1.1e-07 Score=81.21 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=34.5
Q ss_pred CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+......+|+.+++++++.+|+ +.+++|||+.||.+|+++
T Consensus 167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~ 208 (266)
T PRK10187 167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAV 208 (266)
T ss_pred EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHH
Confidence 3444556899999999999987 789999999999999985
No 140
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=98.72 E-value=5.9e-07 Score=74.03 Aligned_cols=163 Identities=18% Similarity=0.167 Sum_probs=98.0
Q ss_pred cCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHH----HHHH
Q 025042 81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQV----QDFL 149 (259)
Q Consensus 81 ~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i----~~~~ 149 (259)
..+..++||+||||++++. +..+...++.... ..+..+. .|. .-.+........+. -+.+++ ++..
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~-~~~~~~~-mG~-~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~ 84 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYP-WDVKVKS-MGK-RTSEAARLFVKKLPDPVSREEFNKEEEEIL 84 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCCh-HHHHHHH-cCC-CHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 4578999999999998763 3334444443221 1222222 222 22233222222221 122222 1122
Q ss_pred Hh--CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcC-CCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042 150 EK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLG-IPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 226 (259)
Q Consensus 150 ~~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lg-i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 226 (259)
.. ....+.||+..+++.|+.+|+++.++|+..+...+...+.++ +- ..|...+..++ .....+++
T Consensus 85 ~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~--~~f~~~v~~d~----------~~v~~gKP 152 (222)
T KOG2914|consen 85 DRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIF--KNFSHVVLGDD----------PEVKNGKP 152 (222)
T ss_pred HHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHH--HhcCCCeecCC----------ccccCCCC
Confidence 22 135688999999999999999999999999988888777665 32 22332221111 11123567
Q ss_pred hHHHHHHHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042 227 KAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 227 K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~ 258 (259)
.++......+.+|. +.|++|.|+.+.+.|+++
T Consensus 153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a 187 (222)
T KOG2914|consen 153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA 187 (222)
T ss_pred CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh
Confidence 77777777777776 689999999999998875
No 141
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.72 E-value=5.6e-08 Score=89.79 Aligned_cols=86 Identities=17% Similarity=0.196 Sum_probs=64.9
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCcc------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFR------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR 223 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~ 223 (259)
++|++.+.|+.|++.|++++|+|+... ..+..+++++|++.+.+++.. ....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----------------~~~~ 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----------------AGFY 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----------------CCCC
Confidence 579999999999999999999998655 346778899998632222110 0112
Q ss_pred CCChHHHHHHHHHHcC----C--CeEEEEecCcccHHhhh
Q 025042 224 SGGKAAAVQQIRKAHA----Y--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g----~--~~v~~vGDg~ND~~al~ 257 (259)
.+++...+..+.++++ + ++++||||..+|+.+.+
T Consensus 262 RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~ 301 (526)
T TIGR01663 262 RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGK 301 (526)
T ss_pred CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHH
Confidence 4778889999988874 4 79999999999987643
No 142
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.72 E-value=4.5e-08 Score=82.74 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=34.9
Q ss_pred CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+......+|..+++.+++.+|+ +++++|||+.||++|++.
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~ 201 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEI 201 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHc
Confidence 3444567999999999999997 799999999999999975
No 143
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.72 E-value=1.1e-07 Score=74.69 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=61.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHH---HHHHH-----cCCCCCcEeecceeecCCCceecccCCCC-CcCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN---PIASV-----LGIPPENIFANQLLFKSSGEFLGFDANEP-TSRSG 225 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~---~i~~~-----lgi~~~~~~~~~l~~~~~~~~~g~~~~~~-~~~~~ 225 (259)
...|++.++++.++++|++++++||.....+. .+++. .+++...++. .++.+......+. ...+.
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~------~~g~~~~~~~~e~i~~~~~ 100 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLL------SPDRLFAALHREVISKKPE 100 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEE------cCCcchhhhhcccccCCHH
Confidence 34689999999999999999999998777664 56665 2344222222 1222211001111 11222
Q ss_pred -ChHHHHHHHHHHcC---CCeEEEEecCcccHHhhhc
Q 025042 226 -GKAAAVQQIRKAHA---YKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 226 -~K~~~v~~l~~~~g---~~~v~~vGDg~ND~~al~~ 258 (259)
-|.+.++.+.+.+. ..-++.|||+.+|+.+=+.
T Consensus 101 ~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~ 137 (157)
T smart00775 101 VFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSA 137 (157)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHH
Confidence 38889999988543 2455679999999987553
No 144
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=98.67 E-value=1.9e-07 Score=72.29 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=63.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
...|++.+.++.+++.|++++++|+..+.-+..+++.+|++ .++.. .+|=...+++.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A---------------------~KP~~~~fr~A 102 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRA---------------------KKPFGRAFRRA 102 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecc---------------------cCccHHHHHHH
Confidence 45688999999999999999999999999999999999996 33332 35566788888
Q ss_pred HHHcCC--CeEEEEecCc-ccHHh
Q 025042 235 RKAHAY--KVLAMIGDGA-TDLEV 255 (259)
Q Consensus 235 ~~~~g~--~~v~~vGDg~-ND~~a 255 (259)
+++.++ ++|+||||.. +|+-+
T Consensus 103 l~~m~l~~~~vvmVGDqL~TDVlg 126 (175)
T COG2179 103 LKEMNLPPEEVVMVGDQLFTDVLG 126 (175)
T ss_pred HHHcCCChhHEEEEcchhhhhhhc
Confidence 888888 8999999975 35543
No 145
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.58 E-value=5.5e-07 Score=84.68 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=32.6
Q ss_pred CCCChHHHHHHHHHHcCC--CeEEEE--ecCcccHHhhhcC
Q 025042 223 RSGGKAAAVQQIRKAHAY--KVLAMI--GDGATDLEVSIFI 259 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~--~~v~~v--GDg~ND~~al~~v 259 (259)
...+|..+++.+++.+|+ ++++.| |||.||++|++++
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~A 650 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETV 650 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhC
Confidence 367999999999999987 677888 9999999999864
No 146
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.56 E-value=1.6e-06 Score=71.97 Aligned_cols=90 Identities=18% Similarity=0.104 Sum_probs=67.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..+-+++.+++++||+.|..+.++|+..... +.++..+|+. .+|...+...+. -..+|.+.+.+.
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~--~~fD~vv~S~e~------------g~~KPDp~If~~ 176 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLS--AYFDFVVESCEV------------GLEKPDPRIFQL 176 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHH--Hhhhhhhhhhhh------------ccCCCChHHHHH
Confidence 3566788899999999998888888765544 4777788885 555544321111 124778899999
Q ss_pred HHHHcCC--CeEEEEec-CcccHHhhhc
Q 025042 234 IRKAHAY--KVLAMIGD-GATDLEVSIF 258 (259)
Q Consensus 234 l~~~~g~--~~v~~vGD-g~ND~~al~~ 258 (259)
.+++.|. ++|+++|| ..||+..++.
T Consensus 177 al~~l~v~Pee~vhIgD~l~nD~~gA~~ 204 (237)
T KOG3085|consen 177 ALERLGVKPEECVHIGDLLENDYEGARN 204 (237)
T ss_pred HHHHhCCChHHeEEecCccccccHhHHH
Confidence 9999998 89999999 5789998875
No 147
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.49 E-value=2e-06 Score=71.27 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=82.4
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID 161 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~ 161 (259)
..++++||+|.|+.++........ .+ ++ . .......+++.....+..|++.
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~-~g--------------~~-~-------------~~~~~~~~wv~~~~apaip~al 126 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHG-YG--------------TE-K-------------TDPTAFWLWLGKGAAPALPEGL 126 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhc-cC--------------CC-c-------------CCHHHHHHHHHcCCCCCCHHHH
Confidence 578999999999988653111110 11 00 0 1123345566655567899999
Q ss_pred HHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCc-CCCChHHHHHHHHHH
Q 025042 162 ELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTS-RSGGKAAAVQQIRKA 237 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~-~~~~K~~~v~~l~~~ 237 (259)
++++.++++|++++++||..... ....+.+.|++ . +. .+.... ..+... .-.-|...-+++.++
T Consensus 127 ~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~--~-~~-~LiLR~--------~~d~~~~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 127 KLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT--G-WK-HLILRG--------LEDSNKTVVTYKSEVRKSLMEE 194 (229)
T ss_pred HHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC--C-cC-eeeecC--------CCCCCchHhHHHHHHHHHHHhC
Confidence 99999999999999999987655 45566778886 2 12 221110 000000 001166777777765
Q ss_pred cCCCeEEEEecCcccHH
Q 025042 238 HAYKVLAMIGDGATDLE 254 (259)
Q Consensus 238 ~g~~~v~~vGDg~ND~~ 254 (259)
|++-+..|||..+|+.
T Consensus 195 -GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 195 -GYRIWGNIGDQWSDLL 210 (229)
T ss_pred -CceEEEEECCChHHhc
Confidence 6688999999999984
No 148
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=98.48 E-value=7e-07 Score=74.29 Aligned_cols=115 Identities=19% Similarity=0.330 Sum_probs=78.5
Q ss_pred CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCC--cEeecceeecCCCceecccCC
Q 025042 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE--NIFANQLLFKSSGEFLGFDAN 218 (259)
Q Consensus 141 ~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~--~~~~~~l~~~~~~~~~g~~~~ 218 (259)
....+.+.+.+....+|+|+.++++.|.++++++.|+|++....++.++++.|.-++ +++++.+.||++|.+.|+.-+
T Consensus 76 ~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~ 155 (246)
T PF05822_consen 76 TKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGP 155 (246)
T ss_dssp BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS
T ss_pred CHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCC
Confidence 456677778777789999999999999999999999999999999999998875433 578999999999999998764
Q ss_pred CCCcCCCChHHHHHH---HHHHcC-CCeEEEEecCcccHHhhh
Q 025042 219 EPTSRSGGKAAAVQQ---IRKAHA-YKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~---l~~~~g-~~~v~~vGDg~ND~~al~ 257 (259)
.+ ..-.|...... +.++.. ..+++..||+..|+.|+.
T Consensus 156 lI--H~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~ 196 (246)
T PF05822_consen 156 LI--HTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMAD 196 (246)
T ss_dssp -----TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTT
T ss_pred ce--EEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhc
Confidence 33 33456653331 122222 178999999999999975
No 149
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=98.48 E-value=1.1e-06 Score=71.42 Aligned_cols=171 Identities=15% Similarity=0.217 Sum_probs=103.0
Q ss_pred EEEeCCCcccccc-hHHHHHHHhcCchhHHHHHHHHcCCCCcHH---------HHHHHHHhhc--CC-CHHHHHHHHHhC
Q 025042 86 VCFDVDSTVCVDE-GIDELAEFCGAGKAVAEWTARAMGGSVPFE---------EALAARLSLF--KP-SLSQVQDFLEKR 152 (259)
Q Consensus 86 vvFD~DGTLt~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~--~~-~~~~i~~~~~~~ 152 (259)
++||+.|.+.-.+ ..+..+....++...-.....+-. .+.++ ..+.-....+ .+ ..+.+.++ .+.
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~~pngrrfF~~~SeyDD-~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~-sE~ 80 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAVFPNGRRFFSNLSEYDD-YLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRI-SEL 80 (315)
T ss_pred ccccCCCCCccchhHHHHHHHHcCCHHHHHHhhhhhhh-HHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHH-HHh
Confidence 7899999996554 455555666666533222211100 00000 0011111111 12 12223333 333
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCc-----------------eecc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGE-----------------FLGF 215 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~-----------------~~g~ 215 (259)
..++.||+.++++.|++. ..-+++|.+.++.++.++..+|++..+++.+.+.+|+-.. +.|.
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHH
Confidence 357899999999999876 5667888889999999999999987778777776652110 0000
Q ss_pred --------------------cCC-CCCcCCCChHHHHHHHHHHcCC-CeEEEEecCcccHHhhhcC
Q 025042 216 --------------------DAN-EPTSRSGGKAAAVQQIRKAHAY-KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 216 --------------------~~~-~~~~~~~~K~~~v~~l~~~~g~-~~v~~vGDg~ND~~al~~v 259 (259)
+.. -....+..|+.+++.+++.-++ ...++||||++|..|++++
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~ 225 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAA 225 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHh
Confidence 000 0112345688889999888777 4579999999999999863
No 150
>PLN02645 phosphoglycolate phosphatase
Probab=98.47 E-value=1.3e-06 Score=76.24 Aligned_cols=71 Identities=17% Similarity=0.314 Sum_probs=56.5
Q ss_pred CCCCCHHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHH
Q 025042 69 NTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDF 148 (259)
Q Consensus 69 ~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 148 (259)
-..+..+..+.+.++|+++||+||||..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~D~DGtl~~~~-------------------------------------------------- 43 (311)
T PLN02645 14 QLLTLENADELIDSVETFIFDCDGVIWKGD-------------------------------------------------- 43 (311)
T ss_pred ccCCHHHHHHHHHhCCEEEEeCcCCeEeCC--------------------------------------------------
Confidence 344455667778899999999999997642
Q ss_pred HHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH---HHcCCC
Q 025042 149 LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIA---SVLGIP 195 (259)
Q Consensus 149 ~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~---~~lgi~ 195 (259)
.+.||+.++|++|+++|++++++||......+.++ +++|++
T Consensus 44 ------~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 44 ------KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred ------ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 24589999999999999999999998877766655 567874
No 151
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.46 E-value=2.8e-07 Score=71.66 Aligned_cols=87 Identities=16% Similarity=0.220 Sum_probs=62.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
..++||+.++|++|+ .+++++|+|+..+..++.+++++++.. .+|...+ ..++ . ...|+. +.+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~-~~f~~i~-~~~d-----------~--~~~KP~-~~k 106 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKK-YFGYRRL-FRDE-----------C--VFVKGK-YVK 106 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCC-CEeeeEE-ECcc-----------c--cccCCe-Eee
Confidence 467999999999998 579999999999999999999999851 2223221 1110 0 112333 333
Q ss_pred HHHHcCC--CeEEEEecCcccHHhhh
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al~ 257 (259)
..+++|. ++|+||||+.+|+.+.+
T Consensus 107 ~l~~l~~~p~~~i~i~Ds~~~~~aa~ 132 (148)
T smart00577 107 DLSLLGRDLSNVIIIDDSPDSWPFHP 132 (148)
T ss_pred cHHHcCCChhcEEEEECCHHHhhcCc
Confidence 3455566 89999999999999875
No 152
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.45 E-value=1.2e-07 Score=80.55 Aligned_cols=92 Identities=14% Similarity=0.085 Sum_probs=61.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR 235 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~ 235 (259)
.+++..+.++.|++.+.++++.|+............+|+. .++.. +.. .....+...++++...++...
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g--~~~~~-i~~--------~~~~~~~~~gKP~p~~~~~~~ 189 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG--PFVTA-LEY--------ATDTKATVVGKPSKTFFLEAL 189 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch--HHHHH-HHH--------HhCCCceeecCCCHHHHHHHH
Confidence 3567788888888888888888887666555444445543 33321 100 001111123578889999999
Q ss_pred HHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 236 KAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 236 ~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
+++|. ++++||||+. +|+.+++.
T Consensus 190 ~~~~~~~~~~~~vGD~~~~Di~~a~~ 215 (257)
T TIGR01458 190 RATGCEPEEAVMIGDDCRDDVGGAQD 215 (257)
T ss_pred HHhCCChhhEEEECCCcHHHHHHHHH
Confidence 99887 8999999996 89998764
No 153
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.41 E-value=6.6e-07 Score=74.63 Aligned_cols=98 Identities=19% Similarity=0.292 Sum_probs=63.7
Q ss_pred HHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHH---HHHHHcCCCC-CcEeecceeecCCCceecccCCCCC
Q 025042 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN---PIASVLGIPP-ENIFANQLLFKSSGEFLGFDANEPT 221 (259)
Q Consensus 146 ~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~---~i~~~lgi~~-~~~~~~~l~~~~~~~~~g~~~~~~~ 221 (259)
.++.........|++.++++.++++|++++++||.....-. .-+.+.|++. ++.+.. +.......
T Consensus 106 ~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr-----------~~~~~~~~ 174 (229)
T PF03767_consen 106 DEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILR-----------PDKDPSKK 174 (229)
T ss_dssp HHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEE-----------EESSTSS-
T ss_pred HHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccc-----------cccccccc
Confidence 44555444467899999999999999999999997655333 3466778752 121111 00000000
Q ss_pred cCCCChHHHHHHHHHHcCCCeEEEEecCcccHHh
Q 025042 222 SRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEV 255 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~a 255 (259)
....-|....+.+.++ |++-+++|||..+|+..
T Consensus 175 ~~~~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 1123588888888888 65789999999999875
No 154
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.40 E-value=1.3e-06 Score=75.07 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=56.4
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHH-HHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN-PIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~-~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
.++++.++++.|+++|. ++++|+....... ......|.. .++.. +.. .++ .+....+++.+..++.+
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g--~~~~~-i~~-----~~g---~~~~~~gKP~p~~~~~~ 211 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTG--SLVAA-IET-----ASG---RQPLVVGKPSPYMFECI 211 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChH--HHHHH-HHH-----HhC---CceeccCCCCHHHHHHH
Confidence 46788999999988886 6778876543321 111122221 12111 100 001 11122357788899999
Q ss_pred HHHcCC--CeEEEEecC-cccHHhhhc
Q 025042 235 RKAHAY--KVLAMIGDG-ATDLEVSIF 258 (259)
Q Consensus 235 ~~~~g~--~~v~~vGDg-~ND~~al~~ 258 (259)
++++|+ ++++||||+ .+|+.+++.
T Consensus 212 ~~~~~~~~~~~lmIGD~~~tDI~~A~~ 238 (279)
T TIGR01452 212 TENFSIDPARTLMVGDRLETDILFGHR 238 (279)
T ss_pred HHHhCCChhhEEEECCChHHHHHHHHH
Confidence 998887 899999999 499998864
No 155
>PRK10444 UMP phosphatase; Provisional
Probab=98.40 E-value=1.7e-06 Score=73.15 Aligned_cols=38 Identities=11% Similarity=0.055 Sum_probs=32.4
Q ss_pred CcCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
...+++++..++.++++++. ++++||||+. +|+.+++.
T Consensus 170 ~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~ 210 (248)
T PRK10444 170 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ 210 (248)
T ss_pred cccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH
Confidence 34468899999999999887 8999999997 89998865
No 156
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.40 E-value=1.1e-06 Score=74.89 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=39.9
Q ss_pred CCC-ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEe
Q 025042 155 RLS-PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIF 200 (259)
Q Consensus 155 ~~~-p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~ 200 (259)
+++ |++.++|++|+++|++++++|++.+..+...++++|++ .+|
T Consensus 145 ~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd--~YF 189 (301)
T TIGR01684 145 RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD--RYF 189 (301)
T ss_pred ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC--ccc
Confidence 355 99999999999999999999999999999999999997 555
No 157
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.39 E-value=4.3e-06 Score=66.63 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=64.0
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE 219 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~ 219 (259)
.+.|++.+.+..|++.|++++++|+- ........++..|+..+.++.. ...++
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~C------------ph~p~ 98 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYC------------PHHPE 98 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEEC------------CCCCC
Confidence 46799999999999999999999982 1111233444555432232221 11111
Q ss_pred C-CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 220 P-TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 220 ~-~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
. ..-.+||...+.++.+++++ .+.++|||...|+.++..+
T Consensus 99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~ 141 (181)
T COG0241 99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENA 141 (181)
T ss_pred CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHC
Confidence 1 11237899999999999887 8999999999999988653
No 158
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.37 E-value=4.4e-06 Score=70.65 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=31.7
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
..++++...++.+++++++ ++++||||+. +|+.+++.
T Consensus 175 ~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~ 214 (249)
T TIGR01457 175 YIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGID 214 (249)
T ss_pred ccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHH
Confidence 3457889999999999887 7899999997 89998865
No 159
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.31 E-value=6.1e-06 Score=65.11 Aligned_cols=82 Identities=21% Similarity=0.353 Sum_probs=54.9
Q ss_pred CCCccHHHHHHHHHHCCCc--EEEEeCC-------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCC
Q 025042 155 RLSPGIDELVKKLKANNKN--VYLISGG-------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG 225 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~--v~ivTg~-------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~ 225 (259)
.+.|...+.++++++.+.. +.|+|++ ....++.+.+.+|++ ++-... ..|.
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---vl~h~~-----------------kKP~ 118 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---VLRHRA-----------------KKPG 118 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---EEEeCC-----------------CCCc
Confidence 4567788888888887654 9999997 366688899999995 332210 2355
Q ss_pred ChHHHHHHHHHHcC---CCeEEEEecCc-ccHHhh
Q 025042 226 GKAAAVQQIRKAHA---YKVLAMIGDGA-TDLEVS 256 (259)
Q Consensus 226 ~K~~~v~~l~~~~g---~~~v~~vGDg~-ND~~al 256 (259)
...++++.+..+-+ .++++||||-. +|+-+.
T Consensus 119 ~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~g 153 (168)
T PF09419_consen 119 CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMG 153 (168)
T ss_pred cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHh
Confidence 55566666654411 27999999954 466554
No 160
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.28 E-value=1e-05 Score=68.28 Aligned_cols=97 Identities=20% Similarity=0.301 Sum_probs=60.7
Q ss_pred HHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042 147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR 223 (259)
Q Consensus 147 ~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~ 223 (259)
++......+..|++.++.+.++++|++++++||..... ...-+.+.|++. . +.+.....+... ....
T Consensus 137 ~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~---~-~~LiLR~~~D~~------~~~a 206 (275)
T TIGR01680 137 EFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT---W-EKLILKDPQDNS------AENA 206 (275)
T ss_pred HHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC---c-ceeeecCCCCCc------cchh
Confidence 45555556788999999999999999999999975432 234456678852 1 222211110000 0000
Q ss_pred CCChHHHHHHHHHHcCCCeEEEEecCcccHH
Q 025042 224 SGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~ 254 (259)
.+-|...-+++.++ |++-+..|||..+|+.
T Consensus 207 v~yKs~~R~~li~e-GYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 207 VEYKTAARAKLIQE-GYNIVGIIGDQWNDLK 236 (275)
T ss_pred HHHHHHHHHHHHHc-CceEEEEECCCHHhcc
Confidence 12355555666555 6688999999999984
No 161
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.27 E-value=1.6e-05 Score=64.41 Aligned_cols=108 Identities=14% Similarity=0.267 Sum_probs=74.7
Q ss_pred HHHHHHHHHhC----CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC
Q 025042 142 LSQVQDFLEKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA 217 (259)
Q Consensus 142 ~~~i~~~~~~~----~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~ 217 (259)
..+..+++... ...+.+-.+++|-.|+.++ .++.|+..+..+..++++||+. +.|...+-++-...+ .
T Consensus 83 ~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGie--DcFegii~~e~~np~----~ 154 (244)
T KOG3109|consen 83 ADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIE--DCFEGIICFETLNPI----E 154 (244)
T ss_pred HHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChH--HhccceeEeeccCCC----C
Confidence 45555565542 2356677788888887764 7899999999999999999997 666654433211110 0
Q ss_pred CCCCcCCCChHHHHHHHHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042 218 NEPTSRSGGKAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 218 ~~~~~~~~~K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~v 259 (259)
....|. |-.++.+...+.-|+ ++++||-||.+-+..++.+
T Consensus 155 ~~~vcK--P~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~v 197 (244)
T KOG3109|consen 155 KTVVCK--PSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEV 197 (244)
T ss_pred Cceeec--CCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhc
Confidence 122344 456678888887787 7999999999999887653
No 162
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.26 E-value=2.9e-06 Score=72.34 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=39.4
Q ss_pred CCC-ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEe
Q 025042 155 RLS-PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIF 200 (259)
Q Consensus 155 ~~~-p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~ 200 (259)
++| |++.++|++|+++|++++++|++.+..++..++.+|++ .+|
T Consensus 147 ~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~--~yF 191 (303)
T PHA03398 147 RIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE--GYF 191 (303)
T ss_pred ccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC--ccc
Confidence 355 89999999999999999999999999999999999997 444
No 163
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.24 E-value=9e-07 Score=70.01 Aligned_cols=89 Identities=15% Similarity=0.141 Sum_probs=54.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeC-CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISG-GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg-~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
..++|++.+.|++|+++|+++.+.|- +..+.++.+++.|+++........+ ..........|.+|..-++
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~---------~~~F~~~eI~~gsK~~Hf~ 114 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPL---------IEYFDYLEIYPGSKTTHFR 114 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESSS-HHHHHH
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccc---------hhhcchhheecCchHHHHH
Confidence 57899999999999999999999994 5677899999999996100000000 0000001134679999999
Q ss_pred HHHHHcCC--CeEEEEecCcc
Q 025042 233 QIRKAHAY--KVLAMIGDGAT 251 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~N 251 (259)
++.+..|+ ++++||-|-..
T Consensus 115 ~i~~~tgI~y~eMlFFDDe~~ 135 (169)
T PF12689_consen 115 RIHRKTGIPYEEMLFFDDESR 135 (169)
T ss_dssp HHHHHH---GGGEEEEES-HH
T ss_pred HHHHhcCCChhHEEEecCchh
Confidence 99999898 89999988544
No 164
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=98.23 E-value=8.6e-06 Score=63.36 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=60.9
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHc-----CCCCCcEeecceeecCCCceecccCCCCCcCC-CC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVL-----GIPPENIFANQLLFKSSGEFLGFDANEPTSRS-GG 226 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~l-----gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~-~~ 226 (259)
.++|+.++++.++++|+++.-+|+..... .+.+++.. ++++..++.+ .++.+....-.-....| +-
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~s-----P~~l~~al~rEvi~~~p~~f 102 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLS-----PDSLFSALHREVISKDPEEF 102 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEEC-----CcchhhhhhccccccChHHH
Confidence 46899999999999999999999864333 34455555 6664333322 11111110000000112 35
Q ss_pred hHHHHHHHHHHcC---CCeEEEEecCcccHHhhhc
Q 025042 227 KAAAVQQIRKAHA---YKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 227 K~~~v~~l~~~~g---~~~v~~vGDg~ND~~al~~ 258 (259)
|..+++.++..+. ..-.+.||...+|+.+-+.
T Consensus 103 K~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~ 137 (157)
T PF08235_consen 103 KIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKA 137 (157)
T ss_pred HHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHH
Confidence 9999999998743 2567889999999987554
No 165
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.20 E-value=4e-05 Score=64.73 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=31.4
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
+...+|..+++.+++++++ ++++++|||-||++|+..
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~ 199 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEG 199 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCC
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcC
Confidence 3467899999999999998 789999999999999853
No 166
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.19 E-value=1.2e-05 Score=58.32 Aligned_cols=41 Identities=24% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHH---HHHcCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPI---ASVLGIP 195 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i---~~~lgi~ 195 (259)
.+.||+.++++.|+++|.+++++|++.....+.+ ++.+|++
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 3579999999999999999999999876664443 4667885
No 167
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.16 E-value=1.3e-05 Score=77.79 Aligned_cols=40 Identities=28% Similarity=0.330 Sum_probs=33.6
Q ss_pred CCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
+..+...+|+.+++.+++..+.+.+++|||+.||.+|++.
T Consensus 650 eV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~ 689 (726)
T PRK14501 650 EVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRA 689 (726)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHh
Confidence 3445567899999999996555899999999999999975
No 168
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=98.13 E-value=3.8e-06 Score=83.29 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=73.2
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc---Eeeccee------------------------
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN---IFANQLL------------------------ 205 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~---~~~~~l~------------------------ 205 (259)
++++-+|++|.|+.|+++|++++++|||..+++-.++...++-.++ ++-+...
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 728 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEE 728 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHH
Confidence 6789999999999999999999999999999999998877653211 0000000
Q ss_pred -------ecC-CC--ceecccCC----------------------CCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccH
Q 025042 206 -------FKS-SG--EFLGFDAN----------------------EPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDL 253 (259)
Q Consensus 206 -------~~~-~~--~~~g~~~~----------------------~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~ 253 (259)
... +. .+.|+... .=...|.+|+..++..++..+ ..+++||||.||.
T Consensus 729 ~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~-~~TLAIGDGANDV 807 (1151)
T KOG0206|consen 729 LEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLK-AVTLAIGDGANDV 807 (1151)
T ss_pred HHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCC-ceEEEeeCCCccc
Confidence 000 00 01111100 012347789999999977766 6999999999999
Q ss_pred Hhhhc
Q 025042 254 EVSIF 258 (259)
Q Consensus 254 ~al~~ 258 (259)
+|++.
T Consensus 808 sMIQ~ 812 (1151)
T KOG0206|consen 808 SMIQE 812 (1151)
T ss_pred hheee
Confidence 99874
No 169
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.06 E-value=4.7e-06 Score=65.54 Aligned_cols=81 Identities=20% Similarity=0.296 Sum_probs=52.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCC---cc-----------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGG---FR-----------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPT 221 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~---~~-----------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~ 221 (259)
+.|++.+.|++|.+.|+.++|+|+- .+ ..++.+++.++++- .++...- . ..
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~-~~~~a~~----~----------d~ 94 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPI-QVYAAPH----K----------DP 94 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-E-EEEECGC----S----------ST
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCce-EEEecCC----C----------CC
Confidence 4468999999999999999999974 11 22345677788862 2222210 0 11
Q ss_pred cCCCChHHHHHHHHHHcC----C--CeEEEEecCccc
Q 025042 222 SRSGGKAAAVQQIRKAHA----Y--KVLAMIGDGATD 252 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g----~--~~v~~vGDg~ND 252 (259)
+ .+|+.-.++.+.+.++ + ++++||||..+|
T Consensus 95 ~-RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 95 C-RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp T-STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred C-CCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence 2 3678888888887764 2 789999998665
No 170
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.98 E-value=8.1e-05 Score=61.23 Aligned_cols=127 Identities=19% Similarity=0.298 Sum_probs=84.5
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID 161 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~ 161 (259)
+.++|+.|+|-|+.++..-.-+.-.-+ ....++....|.......+.||+.
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nn-----------------------------k~f~pe~Wd~wV~a~~sk~vpGA~ 128 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNN-----------------------------KGFTPETWDKWVQAKKSKAVPGAV 128 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcC-----------------------------CCCCccchHHHHhhcccccCccHH
Confidence 445999999999988663111110000 012345566777776678899999
Q ss_pred HHHHHHHHCCCcEEEEeCCcccc-H---HHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042 162 ELVKKLKANNKNVYLISGGFRHM-I---NPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA 237 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~-~---~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~ 237 (259)
||+++.-++|..++.+|+..++. . ..-+.++|++ .+--..+.+- -..++|....+...+.
T Consensus 129 eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~--~~~~~~~llk--------------k~~k~Ke~R~~~v~k~ 192 (274)
T COG2503 129 EFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLP--QVLESHLLLK--------------KDKKSKEVRRQAVEKD 192 (274)
T ss_pred HHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcc--cccccceEEe--------------eCCCcHHHHHHHHhhc
Confidence 99999999999999999876655 2 2335678887 3322222221 1135677777777665
Q ss_pred cCCCeEEEEecCcccHHh
Q 025042 238 HAYKVLAMIGDGATDLEV 255 (259)
Q Consensus 238 ~g~~~v~~vGDg~ND~~a 255 (259)
+ ..|+.|||..+|...
T Consensus 193 ~--~iVm~vGDNl~DF~d 208 (274)
T COG2503 193 Y--KIVMLVGDNLDDFGD 208 (274)
T ss_pred c--ceeeEecCchhhhcc
Confidence 4 789999999999754
No 171
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=97.90 E-value=0.00013 Score=66.57 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=63.1
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
++++ .++..++.| +++++|...+-.++++++. +|.+ .+.+.++++.+.|.++|...+.. + .+.|...+
T Consensus 97 v~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D--~VvGTEL~v~~~G~~TG~~~G~n-~-~ek~~~rl--- 165 (498)
T PLN02499 97 VDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD--EVIGSELVVNRFGFATGFIRGTD-V-DQSVANRV--- 165 (498)
T ss_pred CCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc--eEEeeeEEEeeccEEEEEEecCc-c-HHHHHHHH---
Confidence 5555 555667778 8999999999999999998 9997 88899999876689999876432 2 22234444
Q ss_pred HHHcCC-CeEEEEecCcccHHhhh
Q 025042 235 RKAHAY-KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 235 ~~~~g~-~~v~~vGDg~ND~~al~ 257 (259)
++.+|- ...+=+||...|-+-+.
T Consensus 166 ~~~~g~~~~~vg~~~~~~~~~f~~ 189 (498)
T PLN02499 166 ANLFVDERPQLGLGRISASSSFLS 189 (498)
T ss_pred HHHhCccCceecccCCcccchhhh
Confidence 444442 23555677666655443
No 172
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.89 E-value=2.2e-05 Score=64.99 Aligned_cols=39 Identities=21% Similarity=0.202 Sum_probs=34.5
Q ss_pred CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
...+.+|+.+++.+++++|+ ++|++||||.||++|++++
T Consensus 174 ~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a 214 (221)
T TIGR02463 174 LGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA 214 (221)
T ss_pred ecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence 34566899999999999998 7899999999999999864
No 173
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.78 E-value=0.00028 Score=62.13 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=36.6
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc-C
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL-G 193 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l-g 193 (259)
...|++.++|++|+++|+++.|+|++....++.+++.+ |
T Consensus 184 ~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 184 LRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 56899999999999999999999999999999999986 6
No 174
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.77 E-value=5.6e-05 Score=64.22 Aligned_cols=57 Identities=25% Similarity=0.375 Sum_probs=47.4
Q ss_pred HhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCC
Q 025042 78 QLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLS 157 (259)
Q Consensus 78 e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 157 (259)
+.+.++++++||+||||..+. .+.
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~--------------------------------------------------------~~i 26 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGN--------------------------------------------------------EAI 26 (269)
T ss_pred chhhhcCEEEEcCcCceEeCC--------------------------------------------------------ccC
Confidence 456789999999999997654 356
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIAS 190 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~ 190 (259)
||+.++|+.|+++|++++++||+.....+.+.+
T Consensus 27 pga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~ 59 (269)
T COG0647 27 PGAAEALKRLKAAGKPVIFLTNNSTRSREVVAA 59 (269)
T ss_pred chHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Confidence 999999999999999999999987777664433
No 175
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.74 E-value=0.00041 Score=56.42 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=44.2
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
|.....|..+++.- ..|+.-+.... ....++..|+. .+++...-. ... ...+|..+.+.+
T Consensus 137 pre~aaLa~~rEys--eti~~rs~d~~~~~~~~~L~e~glt--~v~garf~~-----------v~~--as~gKg~Aa~~l 199 (274)
T COG3769 137 PREQAALAMLREYS--ETIIWRSSDERMAQFTARLNERGLT--FVHGARFWH-----------VLD--ASAGKGQAANWL 199 (274)
T ss_pred ChHHhHHHHHHHhh--hheeecccchHHHHHHHHHHhcCce--EEeccceEE-----------Eec--cccCccHHHHHH
Confidence 34444566666643 34444443332 23456677775 333332210 000 123355555544
Q ss_pred HHHc---CC-CeEEEEecCcccHHhhhc
Q 025042 235 RKAH---AY-KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 235 ~~~~---g~-~~v~~vGDg~ND~~al~~ 258 (259)
.+.+ +. +.++.+|||.||+|++.-
T Consensus 200 l~~y~rl~~~r~t~~~GDg~nD~Pl~ev 227 (274)
T COG3769 200 LETYRRLGGARTTLGLGDGPNDAPLLEV 227 (274)
T ss_pred HHHHHhcCceeEEEecCCCCCcccHHHh
Confidence 4433 33 569999999999999863
No 176
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.71 E-value=5.3e-05 Score=56.40 Aligned_cols=78 Identities=15% Similarity=0.129 Sum_probs=58.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCC-ChHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG-GKAAAVQ 232 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~-~K~~~v~ 232 (259)
.+++|.++++++++|+.|+-+...|=+..+.+-..++.+++. ++|.-.+. .|. -|...+.
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~--~yFhy~Vi-----------------ePhP~K~~ML~ 100 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL--QYFHYIVI-----------------EPHPYKFLMLS 100 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh--hhEEEEEe-----------------cCCChhHHHHH
Confidence 578999999999999999999999988888888899999997 77765431 122 2555555
Q ss_pred HHHHHc----CC----CeEEEEecCc
Q 025042 233 QIRKAH----AY----KVLAMIGDGA 250 (259)
Q Consensus 233 ~l~~~~----g~----~~v~~vGDg~ 250 (259)
++.... +. .+++|+-|-.
T Consensus 101 ~llr~i~~er~~~ikP~~Ivy~DDR~ 126 (164)
T COG4996 101 QLLREINTERNQKIKPSEIVYLDDRR 126 (164)
T ss_pred HHHHHHHHhhccccCcceEEEEeccc
Confidence 554433 32 6888888753
No 177
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=97.57 E-value=0.0024 Score=50.51 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=60.9
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...++|++.+.|++-++.|.+++|.|++.-...+-+..+..- ..+ ++.+.|+..- ...++-......
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~a-------gdL----~~lfsGyfDt--tiG~KrE~~SY~ 167 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDA-------GDL----NSLFSGYFDT--TIGKKRESQSYA 167 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhccccc-------ccH----Hhhhcceeec--cccccccchhHH
Confidence 457999999999999999999999998866544443332211 000 1111221111 122333444667
Q ss_pred HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 233 QIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
++....|+ .+++|..|.++.+.|++-
T Consensus 168 kIa~~iGl~p~eilFLSDn~~EL~AA~~ 195 (229)
T COG4229 168 KIAGDIGLPPAEILFLSDNPEELKAAAG 195 (229)
T ss_pred HHHHhcCCCchheEEecCCHHHHHHHHh
Confidence 77777787 899999999999988874
No 178
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.57 E-value=0.00011 Score=60.87 Aligned_cols=194 Identities=17% Similarity=0.201 Sum_probs=112.1
Q ss_pred cccccCCCCCCCHHHHHhc-c-------CcCEEEEeCCCcccccch---------HHHHHHHhcCc-----hhHHHHHHH
Q 025042 62 SALGRSENTLPSKEVLQLW-R-------TADAVCFDVDSTVCVDEG---------IDELAEFCGAG-----KAVAEWTAR 119 (259)
Q Consensus 62 ~~~~~~g~~v~~~~~~e~~-~-------~~k~vvFD~DGTLt~~~~---------~~~l~~~~~~~-----~~~~~~~~~ 119 (259)
..+...-+.+|++...|.. . ..-.++.|+|=||+.-.. ...+-...... .....++.+
T Consensus 9 ~~l~~~~v~vkdp~~v~~~l~~~v~gga~~~~vIsdfd~TLSrfa~~~G~r~pS~~~Vfd~~~~~~~~e~~~k~~~Lyhk 88 (298)
T KOG3128|consen 9 PLLGEEQVRVKDPTAVEAKLRKMVVGGAGKLQVISDFDYTLSRFATEQGKRCPSCFGVFDDNVKRLKPECRAKFVALYHK 88 (298)
T ss_pred hhhCCcceeecChHHHHHHHHHHhcCCccceeEeecCchhHHHHHHhhcCcCCccccchhhhhhcCCHHHHHHHHHHHhh
Confidence 3445556778888777653 1 234689999999965211 11111111111 112233444
Q ss_pred HcC----------CCCcHHHHHHH-HHhhcC---CCHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccH
Q 025042 120 AMG----------GSVPFEEALAA-RLSLFK---PSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (259)
Q Consensus 120 ~~~----------~~~~~~~~~~~-~~~~~~---~~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~ 185 (259)
|.. .++++++.+.. ...++. .....+.++.++....+|+|..++++.|+++++++.+.|.+....+
T Consensus 89 Y~PIEidP~ltieEKvp~MeeWW~kSH~Lliq~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdii 168 (298)
T KOG3128|consen 89 YYPIEIDPVLTIEEKVPHMEEWWTKSHELLIQGGFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDII 168 (298)
T ss_pred ccCcccCCCCChhhhchHHHHHHhcccceeecCCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHH
Confidence 321 22233322222 222221 2467788888886678999999999999999999999999999999
Q ss_pred HHHHHHc-CCCC-CcEeecceeecCCCceecccCCCCCcCCCChHH-HHHHHHHHcC----CCeEEEEecCcccHHhhh
Q 025042 186 NPIASVL-GIPP-ENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA-AVQQIRKAHA----YKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 186 ~~i~~~l-gi~~-~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~-~v~~l~~~~g----~~~v~~vGDg~ND~~al~ 257 (259)
+.+..+- ++-+ .++.++.+.|+++|...|+...-+. .-+|.. .++.-.+.+. -..+++-||++.|+.|..
T Consensus 169 Eev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lih--tfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~ 245 (298)
T KOG3128|consen 169 EEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIH--TFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMAD 245 (298)
T ss_pred HHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHH--HHccchHHHHhhhHHHhhccCCceEEEeccccccchhhc
Confidence 8887653 3322 2455666777766665544322110 011221 2222122221 168999999999999874
No 179
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.53 E-value=0.00033 Score=52.76 Aligned_cols=45 Identities=16% Similarity=0.068 Sum_probs=34.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCcccc---------------HHHHHHHcCCCCCcE
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---------------INPIASVLGIPPENI 199 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---------------~~~i~~~lgi~~~~~ 199 (259)
.+.+++.+.++.+++.|+.++++||..... ...++++-+++.+++
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l 83 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEI 83 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceE
Confidence 466889999999999999999999976543 345677778874333
No 180
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.43 E-value=0.00011 Score=61.47 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
....+|..+++.+++++|+ +++++|||+.||++|++.
T Consensus 155 ~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~ 193 (236)
T TIGR02471 155 PLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRG 193 (236)
T ss_pred eCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcC
Confidence 4457999999999999997 689999999999999975
No 181
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.40 E-value=0.0031 Score=53.38 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=67.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHH---HHHcCCCCCcEeecceeecCCCceec------------ccCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPI---ASVLGIPPENIFANQLLFKSSGEFLG------------FDANE 219 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i---~~~lgi~~~~~~~~~l~~~~~~~~~g------------~~~~~ 219 (259)
..-+++.++++.|++.|+++.-+|.......... ++++|++.+.- . +..++.+.. +..+-
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~----~-~~~~~~~~~~~~~~~~~~~~~~~~GI 155 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSS----S-FPEDGIISFPVFDSALSRAPSFYDGI 155 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCcccc----c-cccCcceecccccCCCCCCceeecCe
Confidence 4678999999999999999999998776655544 45678863221 1 111221111 11112
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhh
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~ 257 (259)
.+..+.+|+..+..+..+.|. +.++||-|+...+..+.
T Consensus 156 lft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~ 195 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVE 195 (252)
T ss_pred EEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 334567899999999999887 89999999987776553
No 182
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.38 E-value=0.00038 Score=57.53 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=33.4
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
..++|+.++++|++++++||.....+..+.+.++++
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 678999999999999999999999999999999985
No 183
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.34 E-value=0.00016 Score=57.02 Aligned_cols=86 Identities=14% Similarity=0.285 Sum_probs=59.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
...|||+.++|++|.+. +.++|.|.+.+..++.+++.++... ..|...+.- ++... ..++ .++.
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~-~~f~~~l~r-~~~~~-----------~~~~--~~K~ 104 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG-KVISRRLYR-ESCVF-----------TNGK--YVKD 104 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC-CEEeEEEEc-cccEE-----------eCCC--EEeE
Confidence 46899999999999987 9999999999999999999999751 244433211 11100 0112 2222
Q ss_pred HHHHcCC--CeEEEEecCcccHHhh
Q 025042 234 IRKAHAY--KVLAMIGDGATDLEVS 256 (259)
Q Consensus 234 l~~~~g~--~~v~~vGDg~ND~~al 256 (259)
+.. .|. +++++|||+..|..+.
T Consensus 105 L~~-l~~~~~~vIiVDD~~~~~~~~ 128 (162)
T TIGR02251 105 LSL-VGKDLSKVIIIDNSPYSYSLQ 128 (162)
T ss_pred chh-cCCChhhEEEEeCChhhhccC
Confidence 222 243 7899999999987654
No 184
>PTZ00174 phosphomannomutase; Provisional
Probab=97.34 E-value=0.00044 Score=58.36 Aligned_cols=38 Identities=18% Similarity=0.313 Sum_probs=32.5
Q ss_pred CCCcCCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhhc
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSIF 258 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~~ 258 (259)
+....+.+|+.+++.|+++. +++++||| +.||++|+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~--~eviafGD~~~~~~NDieMl~~ 222 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDF--KEIHFFGDKTFEGGNDYEIYND 222 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhh--hhEEEEcccCCCCCCcHhhhhc
Confidence 34445678999999999984 89999999 9999999985
No 185
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.26 E-value=0.0002 Score=60.24 Aligned_cols=89 Identities=17% Similarity=0.048 Sum_probs=61.2
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK 236 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~ 236 (259)
+++..++++.++++|+++ ++|+............+|.. .++. .+.. .+. ++...++|+...++...+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g--~~~~-~i~~------~g~---~~~~~gKP~~~~~~~~~~ 206 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG--YYAE-LIKQ------LGG---KVIYSGKPYPAIFHKALK 206 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc--HHHH-HHHH------hCC---cEecCCCCCHHHHHHHHH
Confidence 688899999998889986 77887776665555555543 2222 1100 111 112246788999999999
Q ss_pred HcCC---CeEEEEecC-cccHHhhhc
Q 025042 237 AHAY---KVLAMIGDG-ATDLEVSIF 258 (259)
Q Consensus 237 ~~g~---~~v~~vGDg-~ND~~al~~ 258 (259)
++|. ++++||||+ .+|+.+++.
T Consensus 207 ~~~~~~~~~~~~vGD~~~~Di~~a~~ 232 (242)
T TIGR01459 207 ECSNIPKNRMLMVGDSFYTDILGANR 232 (242)
T ss_pred HcCCCCcccEEEECCCcHHHHHHHHH
Confidence 8875 479999999 599998764
No 186
>PLN02382 probable sucrose-phosphatase
Probab=97.21 E-value=0.00026 Score=64.20 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=33.6
Q ss_pred CcCCCChHHHHHHHHHHc---CC--CeEEEEecCcccHHhhhc
Q 025042 221 TSRSGGKAAAVQQIRKAH---AY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 221 ~~~~~~K~~~v~~l~~~~---g~--~~v~~vGDg~ND~~al~~ 258 (259)
.....+|..+++.+++++ |+ +++++||||.||++|++.
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ 212 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV 212 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc
Confidence 345678999999999998 76 799999999999999975
No 187
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.18 E-value=0.0003 Score=59.55 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=32.9
Q ss_pred cCCCChHHHHHHHHHHcCC----CeEEEEecCcccHHhhhcC
Q 025042 222 SRSGGKAAAVQQIRKAHAY----KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~----~~v~~vGDg~ND~~al~~v 259 (259)
....+|..+++.+++.+|+ +++++||||.||++|++.+
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~a 213 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVV 213 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHC
Confidence 3467899999999999874 5799999999999999864
No 188
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.12 E-value=0.001 Score=56.40 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
...+.++.++++|++++++||.....+..+++++|++
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999999985
No 189
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.09 E-value=0.0017 Score=57.08 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=30.6
Q ss_pred CCccHHHHHHHHHHC----CCcEEEEeCCcccc----HHHHHHHcCCC
Q 025042 156 LSPGIDELVKKLKAN----NKNVYLISGGFRHM----INPIASVLGIP 195 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~----g~~v~ivTg~~~~~----~~~i~~~lgi~ 195 (259)
+.|++.++++.|+.+ |+++.++|+..... ++.+.+++|++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 358999999999988 99999999875333 44445778874
No 190
>PTZ00445 p36-lilke protein; Provisional
Probab=96.95 E-value=0.0065 Score=49.53 Aligned_cols=100 Identities=10% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCcccc---------------HHHHHHHcCCC--CCcEeeccee-ecCCCceeccc
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---------------INPIASVLGIP--PENIFANQLL-FKSSGEFLGFD 216 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---------------~~~i~~~lgi~--~~~~~~~~l~-~~~~~~~~g~~ 216 (259)
.++|+...+++.|++.|+++.++|=+.+.. ++..++.-+-+ .+.+|+-... +++...|.
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~--- 151 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYR--- 151 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhh---
Confidence 467999999999999999999999654433 34444432221 0122221110 00000000
Q ss_pred CCCCCcCCCChH--HHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 217 ANEPTSRSGGKA--AAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 217 ~~~~~~~~~~K~--~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
..-...|.++. -=++++++++|+ ++++||-|....+.+++.
T Consensus 152 -~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~ 196 (219)
T PTZ00445 152 -PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK 196 (219)
T ss_pred -hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH
Confidence 00112233333 344999999998 899999999998888764
No 191
>PTZ00174 phosphomannomutase; Provisional
Probab=96.93 E-value=0.00069 Score=57.16 Aligned_cols=17 Identities=29% Similarity=0.417 Sum_probs=14.4
Q ss_pred CcCEEEEeCCCcccccc
Q 025042 82 TADAVCFDVDSTVCVDE 98 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~ 98 (259)
.+|+|+||+||||.+++
T Consensus 4 ~~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPR 20 (247)
T ss_pred CCeEEEEECcCCCcCCC
Confidence 47899999999998653
No 192
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=96.88 E-value=0.0056 Score=51.27 Aligned_cols=40 Identities=25% Similarity=0.445 Sum_probs=29.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHH----HHHHcCCC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINP----IASVLGIP 195 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~----i~~~lgi~ 195 (259)
+.|++.++++.++++|+++.++|++....... +.+.+|++
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 45799999999999999999999765444433 33336663
No 193
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=96.85 E-value=0.013 Score=50.04 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=53.3
Q ss_pred HHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCC
Q 025042 74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP 153 (259)
Q Consensus 74 ~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (259)
....|.+..+++++||.||.|..++
T Consensus 13 ~~~~e~l~~~DtfifDcDGVlW~g~------------------------------------------------------- 37 (306)
T KOG2882|consen 13 EEARELLDSFDTFIFDCDGVLWLGE------------------------------------------------------- 37 (306)
T ss_pred HHHHHHHhhcCEEEEcCCcceeecC-------------------------------------------------------
Confidence 4566788999999999999995533
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH---HcCCC
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS---VLGIP 195 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~---~lgi~ 195 (259)
.+.||+.++++.|++.|..+.++|+......+..++ ++|+.
T Consensus 38 -~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 38 -KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred -CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 356999999999999998899999987777665544 56764
No 194
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.71 E-value=0.0012 Score=55.65 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=32.9
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
..+.+|..+++.++++++. +.++|+||+.||.+|++.
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~ 201 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRV 201 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHH
Confidence 4467899999999999886 689999999999999975
No 195
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=96.52 E-value=0.0034 Score=42.62 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=31.5
Q ss_pred CCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042 224 SGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIF 258 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~ 258 (259)
++|....++...+++++ ++++||||+ .+|+.+++.
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~ 40 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA 40 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH
Confidence 47889999999999988 899999999 999999875
No 196
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=96.50 E-value=0.023 Score=48.36 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v 259 (259)
+.......|+.+++.+.++.+. +-+++.||..+|-.|++++
T Consensus 175 Evrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v 217 (266)
T COG1877 175 ELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAV 217 (266)
T ss_pred EEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhh
Confidence 3334456799999999998775 3589999999999888764
No 197
>PLN02423 phosphomannomutase
Probab=96.50 E-value=0.0019 Score=54.47 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=32.6
Q ss_pred CCCCCcCCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhhc
Q 025042 217 ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSIF 258 (259)
Q Consensus 217 ~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~~ 258 (259)
+.+.+..+.+|+.+++.|+ . .++|++||| +.||++|++.
T Consensus 180 ~iDi~~~gvnKg~al~~L~-~--~~e~~aFGD~~~~~~ND~eMl~~ 222 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE-D--FDEIHFFGDKTYEGGNDHEIFES 222 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc-C--cCeEEEEeccCCCCCCcHHHHhC
Confidence 4455566789999999999 3 289999999 8999999984
No 198
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=96.43 E-value=0.007 Score=47.39 Aligned_cols=48 Identities=19% Similarity=0.298 Sum_probs=40.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ 203 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~ 203 (259)
..+|||+.++|+++++. ++++++|++.+..+..+++.++... .+|...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~-~~F~~r 104 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG-KYFGDR 104 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC-CeeccE
Confidence 46899999999999965 9999999999999999999998751 255443
No 199
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.33 E-value=0.013 Score=47.32 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=22.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCccc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~ 183 (259)
...+.||+.+++++|.+.|...+++|+....
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 3578899999999999999887777765443
No 200
>PLN02423 phosphomannomutase
Probab=96.30 E-value=0.011 Score=49.88 Aligned_cols=24 Identities=25% Similarity=0.397 Sum_probs=17.8
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCc
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGF 181 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~ 181 (259)
.|...+.+++|+++ +++++.||..
T Consensus 26 ~~~~~~ai~~l~~~-i~fviaTGR~ 49 (245)
T PLN02423 26 TPEMLEFMKELRKV-VTVGVVGGSD 49 (245)
T ss_pred CHHHHHHHHHHHhC-CEEEEECCcC
Confidence 35667788888866 8888888863
No 201
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=96.22 E-value=0.0052 Score=47.99 Aligned_cols=40 Identities=23% Similarity=0.460 Sum_probs=32.9
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
..+||++.++|+++.+. +.++|.|.+.+..++.+.+.++-
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhh
Confidence 46799999999999654 89999999999999999999885
No 202
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=95.59 E-value=0.034 Score=52.14 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=69.1
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID 161 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~ 161 (259)
+-+.|+.|+|||+|..+++-.+.-.++..+. ..|++
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWT--------------------------------------------h~GVA 564 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWT--------------------------------------------HTGVA 564 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcch--------------------------------------------hhhHH
Confidence 4578999999999998876555555553221 13677
Q ss_pred HHHHHHHHCCCcEEEEeCC---ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCC-ChHHHHHHHHHH
Q 025042 162 ELVKKLKANNKNVYLISGG---FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG-GKAAAVQQIRKA 237 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~---~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~-~K~~~v~~l~~~ 237 (259)
.+....+++|+++..+|.. .....+..++.+.-+.-..=..-+..-.++.+....-.-+.-.|+ =|..++..++..
T Consensus 565 kLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~L 644 (738)
T KOG2116|consen 565 KLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDIKNL 644 (738)
T ss_pred HHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHh
Confidence 7777777788887777753 222223333322211000000000000111111110000111233 489999999988
Q ss_pred cCC---CeEEEEecCcccHHh
Q 025042 238 HAY---KVLAMIGDGATDLEV 255 (259)
Q Consensus 238 ~g~---~~v~~vGDg~ND~~a 255 (259)
+.- .=.+-||.-.+|.-.
T Consensus 645 F~p~~nPFYAgFGNR~TDviS 665 (738)
T KOG2116|consen 645 FPPSGNPFYAGFGNRITDVIS 665 (738)
T ss_pred cCCCCCceeeecCCCccccee
Confidence 763 346778888888644
No 203
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.51 E-value=0.0023 Score=64.94 Aligned_cols=61 Identities=8% Similarity=-0.014 Sum_probs=43.2
Q ss_pred eeeeeeeccCccchhhhccCcccc------ccccc----CCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEA------SALGR----SENTLPSKEVLQLWRTADAVCFDVDSTVCVDE 98 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~------~~~~~----~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~ 98 (259)
+.+....+|+++++....+-...+ .+..+ +++++|+-...|.++.++.||+|||||||.+.
T Consensus 304 ~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~ 374 (1057)
T TIGR01652 304 LILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNI 374 (1057)
T ss_pred HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeee
Confidence 344556789988874433311111 22222 46889999999999999999999999998764
No 204
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=95.35 E-value=0.048 Score=48.89 Aligned_cols=28 Identities=18% Similarity=0.400 Sum_probs=21.8
Q ss_pred CcCEEEEeCCCcccccchHHHHHHHhcC
Q 025042 82 TADAVCFDVDSTVCVDEGIDELAEFCGA 109 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~ 109 (259)
..+.|+||+|||||..+.+-.+...++.
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGk 401 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGK 401 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhcc
Confidence 5789999999999998876555555553
No 205
>PLN02645 phosphoglycolate phosphatase
Probab=94.83 E-value=0.023 Score=49.59 Aligned_cols=36 Identities=14% Similarity=0.165 Sum_probs=31.3
Q ss_pred CCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042 223 RSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~ 258 (259)
.++++...++...++++. ++++||||+. +|+.+++.
T Consensus 228 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~ 266 (311)
T PLN02645 228 VGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQN 266 (311)
T ss_pred CCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHH
Confidence 358899999999998887 7999999997 99998764
No 206
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=94.75 E-value=0.058 Score=43.78 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=35.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
..||+..+||+.+.+ .+.++|-|......++.++..+|+.
T Consensus 45 ~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhccc
Confidence 468999999999987 5899999999999999999998863
No 207
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.64 E-value=0.094 Score=44.65 Aligned_cols=46 Identities=20% Similarity=0.249 Sum_probs=37.3
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecce
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL 204 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l 204 (259)
.|.+.+-+..||+.|..+++=|-|.++.+..-+++++++ .+|...+
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~--~~Fd~ii 189 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLE--GYFDIII 189 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCc--cccEEEE
Confidence 367778888999999888888988899999999999987 5565433
No 208
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=94.63 E-value=0.073 Score=42.14 Aligned_cols=85 Identities=16% Similarity=0.218 Sum_probs=52.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHH----HHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINP----IASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA 230 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~----i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~ 230 (259)
.+.+-++++|+...++|-.++.+||..+...+. +++.+.++ +.... . +.|... ...--.|.
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~--~m~pv--~------f~Gdk~---k~~qy~Kt-- 178 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT--NMNPV--I------FAGDKP---KPGQYTKT-- 178 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC--CCcce--e------eccCCC---Cccccccc--
Confidence 466788999999999999999999986655543 44455554 21111 1 111111 00111233
Q ss_pred HHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042 231 VQQIRKAHAYKVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 231 v~~l~~~~g~~~v~~vGDg~ND~~al~~ 258 (259)
..++++ ..-+++|||.||+-|++-
T Consensus 179 -~~i~~~---~~~IhYGDSD~Di~AAke 202 (237)
T COG3700 179 -QWIQDK---NIRIHYGDSDNDITAAKE 202 (237)
T ss_pred -HHHHhc---CceEEecCCchhhhHHHh
Confidence 333343 467899999999999874
No 209
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=94.46 E-value=0.029 Score=46.81 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=22.3
Q ss_pred HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
.++ ++++|+.++++||.....+..++..+++.
T Consensus 23 ~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 23 LLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 444 46667777777777777777777777663
No 210
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=94.21 E-value=0.23 Score=40.42 Aligned_cols=29 Identities=21% Similarity=0.184 Sum_probs=23.7
Q ss_pred CCChHHHHHHHHHHcCC--CeEEEEecCccc
Q 025042 224 SGGKAAAVQQIRKAHAY--KVLAMIGDGATD 252 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND 252 (259)
+++.....+.-++..|+ ++++||||..||
T Consensus 180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~d 210 (262)
T KOG3040|consen 180 GKPSPFFFESALQALGVDPEEAVMIGDDLND 210 (262)
T ss_pred cCCCHHHHHHHHHhcCCChHHheEEcccccc
Confidence 56667788887777787 899999999995
No 211
>PLN02580 trehalose-phosphatase
Probab=94.18 E-value=0.045 Score=49.03 Aligned_cols=35 Identities=23% Similarity=0.143 Sum_probs=30.2
Q ss_pred CCChHHHHHHHHHHcCC--C-e--EEEEecCcccHHhhhc
Q 025042 224 SGGKAAAVQQIRKAHAY--K-V--LAMIGDGATDLEVSIF 258 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~g~--~-~--v~~vGDg~ND~~al~~ 258 (259)
..+|+.+++.+++++|+ . . .++|||+.||.+|++.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 46899999999999987 2 2 4899999999999985
No 212
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.15 E-value=0.42 Score=36.95 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=22.0
Q ss_pred CCCChHHHHHHHHHHcCC---CeEEEEecCc-ccHHhhh
Q 025042 223 RSGGKAAAVQQIRKAHAY---KVLAMIGDGA-TDLEVSI 257 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~---~~v~~vGDg~-ND~~al~ 257 (259)
.|..-.+.+..+-..-.+ .+++||||-. +|+-++.
T Consensus 119 KP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN 157 (190)
T KOG2961|consen 119 KPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYAN 157 (190)
T ss_pred CCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhh
Confidence 355666666665442222 7999999964 4776553
No 213
>PLN03017 trehalose-phosphatase
Probab=94.09 E-value=0.13 Score=45.87 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHHcCC-----CeEEEEecCcccHHhhhc
Q 025042 225 GGKAAAVQQIRKAHAY-----KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~-----~~v~~vGDg~ND~~al~~ 258 (259)
-+|+.+++.+++.+|+ .-.+|+||..+|-.|++.
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~ 320 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKM 320 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHH
Confidence 4899999999998875 258999999999999875
No 214
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=94.06 E-value=0.3 Score=41.40 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=33.3
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIP 195 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~ 195 (259)
+.|++.++++.|+++|++++++||..... ....++.+|++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 67899999999999999999999987776 44456667875
No 215
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=94.02 E-value=0.3 Score=41.88 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=32.1
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHH---HHHHcCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINP---IASVLGIP 195 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~---i~~~lgi~ 195 (259)
.+.|++.++|++|+++|++++++||+....... .++.+|++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 467899999999999999999999975444333 45668875
No 216
>PRK10444 UMP phosphatase; Provisional
Probab=93.90 E-value=0.37 Score=40.68 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=34.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH---cCCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV---LGIP 195 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~---lgi~ 195 (259)
.+.|++.++++.|+++|.+++++||........+.++ +|++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3579999999999999999999999988777666554 6773
No 217
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=93.72 E-value=0.052 Score=53.74 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=33.5
Q ss_pred CCCCCcCCCChHHHHHHHHHH---cCC--CeEEEEecCcccHHhhhcC
Q 025042 217 ANEPTSRSGGKAAAVQQIRKA---HAY--KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 217 ~~~~~~~~~~K~~~v~~l~~~---~g~--~~v~~vGDg~ND~~al~~v 259 (259)
..+......+|+.+++.++++ .|. +.+++|||+.||.+|++.+
T Consensus 753 vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 753 IVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 334445567899999999754 454 6899999999999999853
No 218
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.65 E-value=0.21 Score=45.67 Aligned_cols=82 Identities=15% Similarity=0.128 Sum_probs=54.7
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR 235 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~ 235 (259)
.+....+++..|++.|+-+.++|-+....+..+.++-- +.+.... +.....+.-.+|++-+++++
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp---~MiLkee------------dfa~~~iNW~~K~eNirkIA 320 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP---DMILKEE------------DFAVFQINWDPKAENIRKIA 320 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC---CeEeeHh------------hhhhheecCCcchhhHHHHH
Confidence 34466778999999999999999777776666554321 0111110 11111234568999999999
Q ss_pred HHcCC--CeEEEEecCccc
Q 025042 236 KAHAY--KVLAMIGDGATD 252 (259)
Q Consensus 236 ~~~g~--~~v~~vGDg~ND 252 (259)
+++++ +..+|+-|+.-.
T Consensus 321 kklNlg~dSmvFiDD~p~E 339 (574)
T COG3882 321 KKLNLGLDSMVFIDDNPAE 339 (574)
T ss_pred HHhCCCccceEEecCCHHH
Confidence 99988 788888887643
No 219
>PLN02151 trehalose-phosphatase
Probab=93.18 E-value=0.2 Score=44.36 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=29.1
Q ss_pred CChHHHHHHHHHHcCC--C---eEEEEecCcccHHhhhc
Q 025042 225 GGKAAAVQQIRKAHAY--K---VLAMIGDGATDLEVSIF 258 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~--~---~v~~vGDg~ND~~al~~ 258 (259)
-+|+.+++.+++.+++ . -++|+||-.+|-.|++.
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~ 306 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKI 306 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHH
Confidence 4899999999998775 1 38999999999999875
No 220
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=92.63 E-value=0.34 Score=38.05 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=20.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~ 185 (259)
.+..++...|..++++ .+++.+|.......
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~ 101 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLT 101 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHH
Confidence 4567888899888876 46677776544443
No 221
>PLN02580 trehalose-phosphatase
Probab=91.96 E-value=0.37 Score=43.30 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=30.6
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
.+.|++.+.|+.|.+. ..++|+||.....++.+..-.++
T Consensus 141 ~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 141 LMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred cCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCCc
Confidence 4568999999999877 47999999988888777654443
No 222
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=90.71 E-value=1.1 Score=37.74 Aligned_cols=40 Identities=18% Similarity=0.339 Sum_probs=36.1
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
+.|...+.|++++++|+++++.||.....+..++++++++
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 4567889999999999999999999999899999999885
No 223
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=90.60 E-value=0.49 Score=47.03 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=29.8
Q ss_pred CCccHHHHHHHH-HHCCCcEEEEeCCccccHHHHHHHc
Q 025042 156 LSPGIDELVKKL-KANNKNVYLISGGFRHMINPIASVL 192 (259)
Q Consensus 156 ~~p~~~e~l~~L-k~~g~~v~ivTg~~~~~~~~i~~~l 192 (259)
+.|+..++|+.| ++.|..++++||......+.+....
T Consensus 617 p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 617 PSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 457888899987 6778889999999888888777543
No 224
>PLN03190 aminophospholipid translocase; Provisional
Probab=89.96 E-value=0.15 Score=52.44 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=27.7
Q ss_pred CCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042 68 ENTLPSKEVLQLWRTADAVCFDVDSTVCVDE 98 (259)
Q Consensus 68 g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~ 98 (259)
+..+|+-...|.|+.++.|+.|||||||.+.
T Consensus 438 ~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~ 468 (1178)
T PLN03190 438 RFQCRALNINEDLGQIKYVFSDKTGTLTENK 468 (1178)
T ss_pred cceeccCcchhhhccceEEEEcCCCccccce
Confidence 4568888899999999999999999998874
No 225
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.23 E-value=0.38 Score=40.15 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=30.0
Q ss_pred CCCChHHHHHHHHHHcCC--CeE-EEEecCc-ccHHhhhc
Q 025042 223 RSGGKAAAVQQIRKAHAY--KVL-AMIGDGA-TDLEVSIF 258 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~--~~v-~~vGDg~-ND~~al~~ 258 (259)
.++++...++.+.++++. .++ +||||+. +|+.+++.
T Consensus 186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~ 225 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKN 225 (236)
T ss_pred ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHH
Confidence 457899999999998886 455 9999998 89998764
No 226
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=89.22 E-value=1.1 Score=41.15 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=29.5
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL 192 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l 192 (259)
..|....+|+.||++|.++.++|++.-..+..+++.+
T Consensus 184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl 220 (448)
T PF05761_consen 184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL 220 (448)
T ss_dssp --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc
Confidence 3578999999999999999999999999999988864
No 227
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=88.43 E-value=2.3 Score=37.05 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=28.8
Q ss_pred CCccHHHHHHHHHHC----CCcEEEEeCCccc----cHHHHHHHcCCC
Q 025042 156 LSPGIDELVKKLKAN----NKNVYLISGGFRH----MINPIASVLGIP 195 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~----g~~v~ivTg~~~~----~~~~i~~~lgi~ 195 (259)
+.|++.+.++.|.++ .++.+++|++... -++.+.+.||+.
T Consensus 52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~ 99 (389)
T KOG1618|consen 52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE 99 (389)
T ss_pred CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence 457888889888776 6889999986333 345566678873
No 228
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=87.61 E-value=0.31 Score=40.63 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=27.9
Q ss_pred CCCChHHHHHHHHHHcCC-----CeEEEEecCcccHHhhhcC
Q 025042 223 RSGGKAAAVQQIRKAHAY-----KVLAMIGDGATDLEVSIFI 259 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~-----~~v~~vGDg~ND~~al~~v 259 (259)
...+|+.+++.++++++. +-++|+||..+|-.|++++
T Consensus 162 ~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~ 203 (235)
T PF02358_consen 162 PGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRAL 203 (235)
T ss_dssp TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHH
Confidence 345699999999999863 3699999999999999864
No 229
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=87.30 E-value=2.1 Score=37.00 Aligned_cols=41 Identities=24% Similarity=0.506 Sum_probs=33.9
Q ss_pred hCCCCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCC
Q 025042 151 KRPPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 151 ~~~~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
...++++|...++++.+++.| ++++++|++.. ..+.+.+..
T Consensus 88 ~GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L~~ 129 (296)
T COG0731 88 SGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEELKL 129 (296)
T ss_pred CCCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHhcc
Confidence 346899999999999999999 68999999877 555666653
No 230
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=85.40 E-value=1.3 Score=36.90 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=21.4
Q ss_pred CCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHH
Q 025042 155 RLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIAS 190 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~ 190 (259)
.+.+++.++|+.|.+.. ..++|+||......+.+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~ 55 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGG 55 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcC
Confidence 45688999999997664 3599999987766444433
No 231
>PLN02382 probable sucrose-phosphatase
Probab=85.35 E-value=1.5 Score=39.88 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=11.1
Q ss_pred EEEEeCCCccccc
Q 025042 85 AVCFDVDSTVCVD 97 (259)
Q Consensus 85 ~vvFD~DGTLt~~ 97 (259)
+|+.|+||||++.
T Consensus 11 lI~sDLDGTLL~~ 23 (413)
T PLN02382 11 MIVSDLDHTMVDH 23 (413)
T ss_pred EEEEcCCCcCcCC
Confidence 6788999999875
No 232
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=82.40 E-value=6.2 Score=40.12 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=28.6
Q ss_pred CCCChHHHHHHHHHHcCC--CeE-EEEecCcc-cHHhh
Q 025042 223 RSGGKAAAVQQIRKAHAY--KVL-AMIGDGAT-DLEVS 256 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~--~~v-~~vGDg~N-D~~al 256 (259)
...+|..+|+.|..++|+ +++ +++||+-| |.+.+
T Consensus 953 ~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L 990 (1050)
T TIGR02468 953 LLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL 990 (1050)
T ss_pred CCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH
Confidence 357899999999999999 555 67999999 97754
No 233
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=81.91 E-value=2.7 Score=42.26 Aligned_cols=78 Identities=14% Similarity=0.221 Sum_probs=0.0
Q ss_pred cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccH
Q 025042 81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI 160 (259)
Q Consensus 81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~ 160 (259)
++-.+++||+||||+. +...++..-..+......+.|++
T Consensus 589 a~~RLlfLDyDGTLap-----------------------------------------~~~~P~~~~~~~~~~~a~p~p~l 627 (934)
T PLN03064 589 SNNRLLILGFNATLTE-----------------------------------------PVDTPGRRGDQIKEMELRLHPEL 627 (934)
T ss_pred ccceEEEEecCceecc-----------------------------------------CCCCcccccccccccccCCCHHH
Q ss_pred HHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcCCCCCcEeec
Q 025042 161 DELVKKLKAN-NKNVYLISGGFRHMINPIASVLGIPPENIFAN 202 (259)
Q Consensus 161 ~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~ 202 (259)
.++|+.|.+. +..++|+||......+.++..+++ .+.++
T Consensus 628 ~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L---~LaAE 667 (934)
T PLN03064 628 KEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM---WLAAE 667 (934)
T ss_pred HHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc---eEEee
No 234
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=80.97 E-value=7 Score=32.10 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=31.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH---HHcCCC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIA---SVLGIP 195 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~---~~lgi~ 195 (259)
..|++.+.++.|+..+.++-.+|+...+.-+.+. .++|++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 3489999999999999999999998776655554 456764
No 235
>PLN02151 trehalose-phosphatase
Probab=80.85 E-value=1.6 Score=38.74 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=10.9
Q ss_pred cCEEEEeCCCccc
Q 025042 83 ADAVCFDVDSTVC 95 (259)
Q Consensus 83 ~k~vvFD~DGTLt 95 (259)
--+++||+||||+
T Consensus 98 ~~ll~lDyDGTL~ 110 (354)
T PLN02151 98 QIVMFLDYDGTLS 110 (354)
T ss_pred ceEEEEecCccCC
Confidence 3578889999997
No 236
>PLN03017 trehalose-phosphatase
Probab=80.18 E-value=1.9 Score=38.53 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=10.8
Q ss_pred cCEEEEeCCCccc
Q 025042 83 ADAVCFDVDSTVC 95 (259)
Q Consensus 83 ~k~vvFD~DGTLt 95 (259)
--++++|+||||+
T Consensus 111 ~~llflD~DGTL~ 123 (366)
T PLN03017 111 QIVMFLDYDGTLS 123 (366)
T ss_pred CeEEEEecCCcCc
Confidence 3568889999998
No 237
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=79.93 E-value=4.3 Score=40.27 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=29.9
Q ss_pred CCCccHHHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcC
Q 025042 155 RLSPGIDELVKKLKAN-NKNVYLISGGFRHMINPIASVLG 193 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lg 193 (259)
.+.|+..++|+.|.+. +..++|+||......+.++...+
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 4567888889888754 55699999988888888776544
No 238
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=79.59 E-value=1 Score=37.74 Aligned_cols=15 Identities=33% Similarity=0.423 Sum_probs=12.3
Q ss_pred CcCEEEEeCCCcccc
Q 025042 82 TADAVCFDVDSTVCV 96 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~ 96 (259)
+..+++||+||||+.
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 346899999999965
No 239
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=79.05 E-value=7.7 Score=29.12 Aligned_cols=85 Identities=11% Similarity=0.054 Sum_probs=55.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCC-ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGG-FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~-~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
...+++++..|..|+++|+.+.+.|.+ ..+++...++.+.+...-+.-..++. .......+..|...++
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~----------ft~~~~g~gsklghfk 112 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEE----------FTFEAVGDGSKLGHFK 112 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhc----------CceeeecCcccchhHH
Confidence 568899999999999999999988866 56677788888887632111111100 0011123456777777
Q ss_pred HHHHHcCC--CeEEEEec
Q 025042 233 QIRKAHAY--KVLAMIGD 248 (259)
Q Consensus 233 ~l~~~~g~--~~v~~vGD 248 (259)
.+-...|. ++..++-|
T Consensus 113 e~~n~s~~~~k~~~~fdD 130 (144)
T KOG4549|consen 113 EFTNNSNSIEKNKQVFDD 130 (144)
T ss_pred HHhhccCcchhceeeecc
Confidence 77776665 55666665
No 240
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=78.61 E-value=0.14 Score=42.32 Aligned_cols=42 Identities=7% Similarity=0.017 Sum_probs=36.7
Q ss_pred eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHh
Q 025042 38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQL 79 (259)
Q Consensus 38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~ 79 (259)
+.+.++.+|+++++.........+.++.++|+++|+.+++|.
T Consensus 189 i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 189 ISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 677888999999998888888888999999999999999984
No 241
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=76.30 E-value=16 Score=34.05 Aligned_cols=65 Identities=15% Similarity=0.154 Sum_probs=45.4
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH-HcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS-VLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ 233 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~-~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~ 233 (259)
+.+++.+++ +..+ +.+++|...+-.++.+++ .+|.+ .+.+.+++. ..|.++|... .++|...+.+
T Consensus 134 v~~e~~~v~---~~~~-~~~vv~~~PrvMve~Flkeyl~~d--~V~g~El~~-~~g~~tG~~~------~~~~~~~~~~ 199 (525)
T PLN02588 134 VGLEMFQVL---KRGG-KRVGVSDLPQVMIDVFLRDYLEIE--VVVGRDMKM-VGGYYLGIME------DKKKHELAFD 199 (525)
T ss_pred cCHHHHHHH---hhcC-cEEEEecCCHHHHHHHHHHhcCcc--eEeeeeEEE-eeeEEEEEEc------ccchHHHHHH
Confidence 445665555 3334 456677788899999887 58987 899999887 6677888754 3566666555
No 242
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=73.62 E-value=5.2 Score=34.52 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=30.4
Q ss_pred CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcc-cHHhh
Q 025042 220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGAT-DLEVS 256 (259)
Q Consensus 220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~N-D~~al 256 (259)
|..-++|-....+.+.+++++ ++++||||..| |+--.
T Consensus 219 P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG 258 (306)
T KOG2882|consen 219 PIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFG 258 (306)
T ss_pred CeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHh
Confidence 445578888899999999998 89999999987 76543
No 243
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=72.82 E-value=5.4 Score=34.13 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=30.5
Q ss_pred cCCCChHHHHHHHHHHcCC--CeEEEEecCcc-cHHhhhc
Q 025042 222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGAT-DLEVSIF 258 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~N-D~~al~~ 258 (259)
..++|-..+++..++..+. ++++||||+.. |+.+.+.
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~ 226 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKA 226 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHH
Confidence 4467888899999998887 79999999976 8887654
No 244
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=69.73 E-value=24 Score=31.01 Aligned_cols=94 Identities=17% Similarity=0.325 Sum_probs=59.0
Q ss_pred CCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcC---CCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042 154 PRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLG---IPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA 229 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lg---i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~ 229 (259)
-.+.||+..+.+.|.+.| ..++.+|++.-.+...+-+.++ ++....|-.. +-+....-.......|..
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~--------~g~~~~~i~~sga~rK~~ 266 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRR--------WGGVLDNIIESGAARKGQ 266 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhh--------cCCcccccccchhhhccc
Confidence 468899999999998887 7799999987776655555443 3311111110 100011111223457888
Q ss_pred HHHHHHHHcCCCeEEEEec-CcccHHh
Q 025042 230 AVQQIRKAHAYKVLAMIGD-GATDLEV 255 (259)
Q Consensus 230 ~v~~l~~~~g~~~v~~vGD-g~ND~~a 255 (259)
.+..+..+++=.+.+.+|| |..|.+.
T Consensus 267 ~l~nil~~~p~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 267 SLRNILRRYPDRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHHHHHhCCCceEEEecCCCCcCHHH
Confidence 8887777765468889998 6778664
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=68.90 E-value=32 Score=24.66 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=24.8
Q ss_pred CChHHHHHHHHHHcCCCeEEEEecC-cccHHh
Q 025042 225 GGKAAAVQQIRKAHAYKVLAMIGDG-ATDLEV 255 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~~~v~~vGDg-~ND~~a 255 (259)
+.|...++++.+.+.-.+.+.|||+ ..|.+.
T Consensus 49 ~~K~~~i~~i~~~fP~~kfiLIGDsgq~Dpei 80 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERKFILIGDSGQHDPEI 80 (100)
T ss_pred hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHH
Confidence 4799999999998764689999995 457553
No 246
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=68.23 E-value=27 Score=30.22 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=25.8
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCcccc-HHHHHHHcCC
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHM-INPIASVLGI 194 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~-~~~i~~~lgi 194 (259)
||+..+-+.|++.|.++.++|...... .+...+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 788888999999999999999653332 3334444443
No 247
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=66.33 E-value=19 Score=28.12 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=42.0
Q ss_pred CCccHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceeccc
Q 025042 156 LSPGIDELVKKLKANNKN-VYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFD 216 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~ 216 (259)
-.||..+-.++|+++|+. ++.+|.+.....+.+++.+|... + -.+..|.+|.++...
T Consensus 63 HvPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~~-~---V~f~aD~~g~ftk~l 120 (171)
T KOG0541|consen 63 HVPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGAND-H---VKFVADPAGEFTKSL 120 (171)
T ss_pred cCchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCccc-e---EEEEecCCCceeeec
Confidence 358888899999999999 78889999999999999998741 1 122334556665443
No 248
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=63.08 E-value=12 Score=33.08 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=27.7
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCccccHHHHH
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIA 189 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~ 189 (259)
.|....+++.|+++|.+++++|++...++..-.
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM 274 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGM 274 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCc
Confidence 467888999999999999999999887776533
No 249
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=62.91 E-value=31 Score=28.81 Aligned_cols=87 Identities=8% Similarity=0.074 Sum_probs=59.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCC-----CcEeecceeecCCCceecccCCCCCcCCCChH
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPP-----ENIFANQLLFKSSGEFLGFDANEPTSRSGGKA 228 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~-----~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~ 228 (259)
-..++++.+.++.-+..|++++|.|.+.......+..+-+-.. +.+|... ...+.-.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~------------------iG~K~e~ 183 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTT------------------IGLKVES 183 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcc------------------ccceehh
Confidence 3789999999999999999999999887665554443332110 0112111 1223445
Q ss_pred HHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042 229 AAVQQIRKAHAY--KVLAMIGDGATDLEVSIF 258 (259)
Q Consensus 229 ~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~ 258 (259)
.....+.+..|. ++++|.-|-.+-+.+++.
T Consensus 184 ~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~ 215 (254)
T KOG2630|consen 184 QSYKKIGHLIGKSPREILFLTDVPREAAAARK 215 (254)
T ss_pred HHHHHHHHHhCCChhheEEeccChHHHHHHHh
Confidence 567777777776 799999999998888775
No 250
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=62.45 E-value=4.6 Score=32.85 Aligned_cols=31 Identities=26% Similarity=0.549 Sum_probs=24.8
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEec----CcccHH
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLE 254 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~ 254 (259)
.+=+|.-.++++... |++++.|||| |-||.+
T Consensus 190 ~GWDKtyCLqhle~d-gf~~IhFFGDkT~~GGNDyE 224 (252)
T KOG3189|consen 190 KGWDKTYCLQHLEKD-GFDTIHFFGDKTMPGGNDYE 224 (252)
T ss_pred CCcchhHHHHHhhhc-CCceEEEeccccCCCCCcce
Confidence 345799999999887 7799999999 557754
No 251
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=61.96 E-value=12 Score=35.96 Aligned_cols=51 Identities=18% Similarity=0.270 Sum_probs=42.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceee
Q 025042 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLF 206 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~ 206 (259)
.++||++.+|++++.+. +.+++.|=+.+..+..+++-++=. ..+|+..+..
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~-~~lF~dRIis 250 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPE-GKYFGDRIIS 250 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCC-CccccceEEE
Confidence 58999999999999865 789999999999999999988754 2567766543
No 252
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=59.51 E-value=9.9 Score=33.29 Aligned_cols=37 Identities=14% Similarity=0.166 Sum_probs=25.2
Q ss_pred cCCCChHHHHHHHHHHc--------C-------CCeEEEEecCc-ccHHhhhc
Q 025042 222 SRSGGKAAAVQQIRKAH--------A-------YKVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 222 ~~~~~K~~~v~~l~~~~--------g-------~~~v~~vGDg~-ND~~al~~ 258 (259)
..++|....++..++.+ + .++++||||+. +|+.+++.
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~ 282 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN 282 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh
Confidence 34667777666644433 2 15899999998 89987653
No 253
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=59.08 E-value=6.9 Score=29.96 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=13.2
Q ss_pred cCEEEEeCCCcccccc
Q 025042 83 ADAVCFDVDSTVCVDE 98 (259)
Q Consensus 83 ~k~vvFD~DGTLt~~~ 98 (259)
...+++|+||||++..
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 3679999999998753
No 254
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=58.65 E-value=6.1 Score=30.89 Aligned_cols=15 Identities=20% Similarity=0.423 Sum_probs=12.8
Q ss_pred CEEEEeCCCcccccc
Q 025042 84 DAVCFDVDSTVCVDE 98 (259)
Q Consensus 84 k~vvFD~DGTLt~~~ 98 (259)
+++++|+|+||+...
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 579999999998753
No 255
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=56.19 E-value=20 Score=32.18 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=25.4
Q ss_pred CChHHHHHHHHHHcCC-CeEEEEecCcccHHhhh
Q 025042 225 GGKAAAVQQIRKAHAY-KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~-~~v~~vGDg~ND~~al~ 257 (259)
.+|....+++++++|. ..-++||||.-...+++
T Consensus 408 iGKescFerI~~RFg~K~~yvvIgdG~eee~aAK 441 (468)
T KOG3107|consen 408 IGKESCFERIQSRFGRKVVYVVIGDGVEEEQAAK 441 (468)
T ss_pred ccHHHHHHHHHHHhCCceEEEEecCcHHHHHHHH
Confidence 5799999999999995 34567799966555544
No 256
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=55.22 E-value=28 Score=31.78 Aligned_cols=44 Identities=18% Similarity=0.375 Sum_probs=37.4
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ 203 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~ 203 (259)
.+..++=+.|++.|+++++..|+.......+++++++. .+|.+.
T Consensus 61 esL~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~~--~V~~~~ 104 (429)
T TIGR02765 61 ESLKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVR--TVFLHQ 104 (429)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCCC--EEEEec
Confidence 46677778899999999999999999999999999997 777764
No 257
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.82 E-value=16 Score=30.28 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=33.2
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
.+.+.+.+|++.|++++.+|+........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999888888888999986
No 258
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=53.85 E-value=14 Score=28.64 Aligned_cols=44 Identities=14% Similarity=0.326 Sum_probs=36.1
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ 203 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~ 203 (259)
....++=+.|++.|+.++++.|+.......+++++++. .++.+.
T Consensus 53 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~--~V~~~~ 96 (165)
T PF00875_consen 53 ESLADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT--AVYFNE 96 (165)
T ss_dssp HHHHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES--EEEEE-
T ss_pred HHHHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC--eeEecc
Confidence 46677778889999999999999999999999999987 777653
No 259
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=51.69 E-value=8.1 Score=39.65 Aligned_cols=34 Identities=6% Similarity=0.017 Sum_probs=27.4
Q ss_pred cCCCCCCCHHHHHhccCcCEEEEeCCCcccccch
Q 025042 66 RSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG 99 (259)
Q Consensus 66 ~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~ 99 (259)
......++...-|-+++++.|+.|||||||.+.+
T Consensus 370 d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M 403 (1151)
T KOG0206|consen 370 DTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSM 403 (1151)
T ss_pred CCccccccCCchhhhcceeEEEEcCcCcccccee
Confidence 3455566666789999999999999999998753
No 260
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=51.58 E-value=5.4 Score=25.87 Aligned_cols=25 Identities=32% Similarity=0.468 Sum_probs=16.0
Q ss_pred HHHHHHHcCCCeEEEEecCcccHHhhh
Q 025042 231 VQQIRKAHAYKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 231 v~~l~~~~g~~~v~~vGDg~ND~~al~ 257 (259)
|+++.+++| ..+++||-.-|+++++
T Consensus 7 VqQLLK~fG--~~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFG--IIIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS-------S-HHHHHHHHH
T ss_pred HHHHHHHCC--EEEEeCChHHHHHHHH
Confidence 678888886 6999999999999875
No 261
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=49.29 E-value=34 Score=30.02 Aligned_cols=30 Identities=27% Similarity=0.568 Sum_probs=27.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
++.++|...++++.++++|+.+.|.|++..
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~ 169 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTR 169 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCC
Confidence 477899999999999999999999999854
No 262
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=48.66 E-value=49 Score=27.95 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHHcCC--CeEEEEecCcccHHhhh
Q 025042 225 GGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSI 257 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~ 257 (259)
.+|....+++++++|- ..-++||||..--.+++
T Consensus 213 vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk 247 (274)
T TIGR01658 213 VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQ 247 (274)
T ss_pred cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHH
Confidence 5799999999999985 46788899987655554
No 263
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=48.57 E-value=12 Score=29.12 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=13.8
Q ss_pred CcCEEEEeCCCcccccc
Q 025042 82 TADAVCFDVDSTVCVDE 98 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~ 98 (259)
+..++++|+|.||++..
T Consensus 5 ~kl~LVLDLDeTLihs~ 21 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTT 21 (156)
T ss_pred CceEEEEeCCCCccccc
Confidence 45689999999998754
No 264
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=47.47 E-value=54 Score=33.23 Aligned_cols=100 Identities=12% Similarity=0.223 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042 139 KPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN 218 (259)
Q Consensus 139 ~~~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~ 218 (259)
+|+++.+.+.+... .+-.+..|.++....+|++++-+-+..-..- .+.+...++.+.+ .. +-.+.|...-
T Consensus 633 KGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~-~~~~~~~~~Rd~v-Es------~l~FlGLiVm 702 (1140)
T KOG0208|consen 633 KGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS-TLQKAQKLSRDTV-ES------NLEFLGLIVM 702 (1140)
T ss_pred cCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc-hHHHHhhccHhhh-hc------cceeeEEEEe
Confidence 46778888777763 4567899999999999999765544322222 2222111211110 00 0111222221
Q ss_pred CCCcCCCChHHHHHHHHHHcCCCeEEEEecCc
Q 025042 219 EPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGA 250 (259)
Q Consensus 219 ~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ 250 (259)
+...++ .-...+++|.+. +++.++.-||+.
T Consensus 703 eNkLK~-~T~~VI~eL~~A-nIRtVMcTGDNl 732 (1140)
T KOG0208|consen 703 ENKLKE-ETKRVIDELNRA-NIRTVMCTGDNL 732 (1140)
T ss_pred eccccc-ccHHHHHHHHhh-cceEEEEcCCch
Confidence 112233 334577888777 667788889975
No 265
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=46.40 E-value=23 Score=25.90 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=26.7
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPI 188 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i 188 (259)
-.++..+.++.+|++|.+++.+|+.........
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKL 91 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhh
Confidence 457888999999999999999998766555443
No 266
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=46.31 E-value=1e+02 Score=27.40 Aligned_cols=25 Identities=24% Similarity=0.280 Sum_probs=17.7
Q ss_pred HHHHHHHHHHCCCc--EEEEeCCcccc
Q 025042 160 IDELVKKLKANNKN--VYLISGGFRHM 184 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~--v~ivTg~~~~~ 184 (259)
+-.+.++||+.|.. +.++||+....
T Consensus 53 avkiydeL~~~GedveVA~VsG~~~~~ 79 (344)
T PF04123_consen 53 AVKIYDELKAEGEDVEVAVVSGSPDVG 79 (344)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCCc
Confidence 34567788877754 78899986643
No 267
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=46.25 E-value=1.2e+02 Score=25.00 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=27.4
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHH-HHHHHcCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMIN-PIASVLGI 194 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~-~i~~~lgi 194 (259)
.+.++++.+++.|++++++.|++..... .+.+..|+
T Consensus 58 ~~~~~l~~l~~~g~~v~~v~GNHD~~~~~~~~~~~g~ 94 (241)
T PRK05340 58 EIAAALKALSDSGVPCYFMHGNRDFLLGKRFAKAAGM 94 (241)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCchhhhHHHHHhCCC
Confidence 4566778888889999999999887653 35567776
No 268
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=42.66 E-value=5.6 Score=32.80 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=26.0
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhh
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSI 257 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~ 257 (259)
.+-+|.-.+++|.+. .++++.|||| |=||-|...
T Consensus 159 ~GwDKty~Lr~l~~~-~~~~I~FfGDkt~pGGNDyei~~ 196 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE-GFDEIHFFGDKTFPGGNDYEIFE 196 (220)
T ss_dssp TT-SGGGGGGGTTTT-T-SEEEEEESS-STTSTTHHHHH
T ss_pred CCccHHHHHHHHHhc-ccceEEEEehhccCCCCCceeee
Confidence 456899999998775 2489999999 679988753
No 269
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=42.21 E-value=24 Score=29.43 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=27.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcccc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~ 184 (259)
++.++++..++++.+++.|+++.+.|++....
T Consensus 82 EPll~~~l~~li~~l~~~g~~v~leTNGtl~~ 113 (238)
T TIGR03365 82 NPALQKPLGELIDLGKAKGYRFALETQGSVWQ 113 (238)
T ss_pred chhhhHhHHHHHHHHHHCCCCEEEECCCCCcH
Confidence 35667899999999999999999999987543
No 270
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=41.82 E-value=15 Score=32.93 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=15.1
Q ss_pred CcCEEEEeCCCcccccch
Q 025042 82 TADAVCFDVDSTVCVDEG 99 (259)
Q Consensus 82 ~~k~vvFD~DGTLt~~~~ 99 (259)
.-|.+-||+||||+++.+
T Consensus 74 ~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CcceEEEecCCceeecCC
Confidence 457899999999988754
No 271
>COG0809 QueA S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Translation, ribosomal structure and biogenesis]
Probab=41.81 E-value=41 Score=29.66 Aligned_cols=19 Identities=32% Similarity=0.587 Sum_probs=16.2
Q ss_pred HHHHHHHHHHCCCcEEEEe
Q 025042 160 IDELVKKLKANNKNVYLIS 178 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivT 178 (259)
..++|++|+++|+.+..+|
T Consensus 188 t~~LL~kLk~kGv~~afvT 206 (348)
T COG0809 188 TEELLEKLKAKGVEIAFVT 206 (348)
T ss_pred CHHHHHHHHHCCceEEEEE
Confidence 4689999999999987776
No 272
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=41.27 E-value=1.6e+02 Score=22.35 Aligned_cols=45 Identities=18% Similarity=0.226 Sum_probs=29.1
Q ss_pred CCccHHHHHHHHHHCCCc-EEEEeCCcc-----cc--HHHHHHHcCCCCCcEeec
Q 025042 156 LSPGIDELVKKLKANNKN-VYLISGGFR-----HM--INPIASVLGIPPENIFAN 202 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~-v~ivTg~~~-----~~--~~~i~~~lgi~~~~~~~~ 202 (259)
-.+.++++++.|+++|.. +.++-|+.. .. .+..++++|++ .+|..
T Consensus 65 ~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~--~vF~p 117 (134)
T TIGR01501 65 GEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFD--RVFAP 117 (134)
T ss_pred CHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCC--EEECc
Confidence 346788899999999864 334445431 11 23457889987 77764
No 273
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=40.85 E-value=1.3e+02 Score=23.73 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHCCCc--EEEEeCC--ccccHHHHHHHcCC
Q 025042 159 GIDELVKKLKANNKN--VYLISGG--FRHMINPIASVLGI 194 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~--v~ivTg~--~~~~~~~i~~~lgi 194 (259)
++..+=++|+++|+. .+++|.- .+++++.+++.++.
T Consensus 33 ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~~ 72 (163)
T COG2062 33 EAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLGE 72 (163)
T ss_pred HHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhCc
Confidence 444556788888874 5666654 56778888999984
No 274
>COG4632 EpsL Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Carbohydrate transport and metabolism]
Probab=40.45 E-value=14 Score=31.41 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=21.1
Q ss_pred CCCCCCCHHHHHhccCcCEEEEeCCCcc
Q 025042 67 SENTLPSKEVLQLWRTADAVCFDVDSTV 94 (259)
Q Consensus 67 ~g~~v~~~~~~e~~~~~k~vvFD~DGTL 94 (259)
.|.++++..+-+.-..-.+++|++||||
T Consensus 161 dGklvkp~dw~~~t~ae~~~aftkdG~l 188 (320)
T COG4632 161 DGKLVKPYDWAGYTGAEACVAFTKDGTL 188 (320)
T ss_pred CCeEeecCChhhhccccceEEEccCCcE
Confidence 5667776655555556678999999999
No 275
>PRK05590 hypothetical protein; Provisional
Probab=39.52 E-value=13 Score=29.14 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=20.2
Q ss_pred HHHHHHHHcCCCeEEEEe--cCcccH
Q 025042 230 AVQQIRKAHAYKVLAMIG--DGATDL 253 (259)
Q Consensus 230 ~v~~l~~~~g~~~v~~vG--Dg~ND~ 253 (259)
.++.|.++++.+...|+| ||+||-
T Consensus 49 tv~ela~k~~~~~~~~~GfldGin~s 74 (166)
T PRK05590 49 TVKELAEKFGTSVVFFMGFLDGINDS 74 (166)
T ss_pred eHHHHHHHhCCChhhhhhhhhcchhh
Confidence 678899999987888888 999973
No 276
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=39.11 E-value=75 Score=28.27 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=44.4
Q ss_pred cHHHHHHHHHH---CCCcEEEEeC-CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 159 GIDELVKKLKA---NNKNVYLISG-GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 159 ~~~e~l~~Lk~---~g~~v~ivTg-~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
|+...+..|.. ....++-.|. ++-+-+..-++++|++. .++.. ...|..|.+.++.+
T Consensus 59 GA~n~i~~Ls~e~~~~~gViaaSaGNHaQGvA~aa~~lGi~a-~IvMP------------------~~tp~~Kv~a~r~~ 119 (347)
T COG1171 59 GAYNKLSSLSEEEERAAGVIAASAGNHAQGVAYAAKRLGIKA-TIVMP------------------ETTPKIKVDATRGY 119 (347)
T ss_pred hHHHHHHhcChhhhhcCceEEecCCcHHHHHHHHHHHhCCCE-EEEec------------------CCCcHHHHHHHHhc
Confidence 45555656642 2222444444 44444555678899971 22221 23466777776554
Q ss_pred HHHcCCCeEEEEecCcccHHhhh
Q 025042 235 RKAHAYKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 235 ~~~~g~~~v~~vGDg~ND~~al~ 257 (259)
| .+|+..||..+|.....
T Consensus 120 ----G-aeVil~g~~~dda~~~a 137 (347)
T COG1171 120 ----G-AEVILHGDNFDDAYAAA 137 (347)
T ss_pred ----C-CEEEEECCCHHHHHHHH
Confidence 7 69999999999876543
No 277
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=39.09 E-value=1.1e+02 Score=26.64 Aligned_cols=62 Identities=19% Similarity=0.304 Sum_probs=36.0
Q ss_pred CcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC-C--CeEEEEec
Q 025042 172 KNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA-Y--KVLAMIGD 248 (259)
Q Consensus 172 ~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g-~--~~v~~vGD 248 (259)
+..+++-+..+..++.++++-++| ++-... ....|-+-..=+..+.+++| + .+++|+||
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VP---ViNgLt---------------D~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGD 161 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVP---VINGLT---------------DEFHPCQALADLMTIKEHFGSLKGLKLAYVGD 161 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCc---eEcccc---------------cccCcHHHHHHHHHHHHhcCcccCcEEEEEcC
Confidence 445566666677777778877775 221110 01234444444455566655 2 68999999
Q ss_pred Ccc
Q 025042 249 GAT 251 (259)
Q Consensus 249 g~N 251 (259)
|-|
T Consensus 162 gNN 164 (310)
T COG0078 162 GNN 164 (310)
T ss_pred cch
Confidence 944
No 278
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=39.02 E-value=38 Score=24.60 Aligned_cols=32 Identities=6% Similarity=-0.003 Sum_probs=25.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINP 187 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~ 187 (259)
-.++..+.++.++++|.+++.+|+........
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~ 89 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTLAR 89 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChHHH
Confidence 34678888999999999999999876554443
No 279
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=38.98 E-value=46 Score=25.61 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=27.2
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCcc-ccHHHHHHHcC
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGFR-HMINPIASVLG 193 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~-~~~~~i~~~lg 193 (259)
.+...++++.+++.|.++.+.||... +..+.++..++
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD 111 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLD 111 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCC
Confidence 36788999999999999999998543 23345555544
No 280
>COG0678 AHP1 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=38.74 E-value=61 Score=25.22 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=34.7
Q ss_pred CccHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcCCC
Q 025042 157 SPGIDELVKKLKANNKN-VYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
-||-.+....++++|+. ++.+|-+......++++..|.+
T Consensus 58 lPgY~~~~d~f~~kGVD~I~cVSVND~FVm~AWak~~g~~ 97 (165)
T COG0678 58 LPGYLELADEFKAKGVDEIYCVSVNDAFVMNAWAKSQGGE 97 (165)
T ss_pred CccHHHHHHHHHHcCCceEEEEEeCcHHHHHHHHHhcCCC
Confidence 48888899999999998 8888988899999999999886
No 281
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=38.52 E-value=2.2e+02 Score=23.50 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=24.6
Q ss_pred CCCCCccH-HHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGI-DELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~-~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
++.++++. .++++.+++.|+++.+.|++..
T Consensus 80 EPll~~~~~~~l~~~~k~~g~~i~l~TNG~~ 110 (246)
T PRK11145 80 EAILQAEFVRDWFRACKKEGIHTCLDTNGFV 110 (246)
T ss_pred cHhcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 35567774 5899999999999999998864
No 282
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=38.48 E-value=76 Score=22.74 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=27.3
Q ss_pred HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCC
Q 025042 162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE 197 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~ 197 (259)
+....+++.|+++++++-+..+-++.+.+..+.+.+
T Consensus 4 ~~~~~l~~~gv~lv~I~~g~~~~~~~f~~~~~~p~~ 39 (115)
T PF13911_consen 4 RRKPELEAAGVKLVVIGCGSPEGIEKFCELTGFPFP 39 (115)
T ss_pred HhHHHHHHcCCeEEEEEcCCHHHHHHHHhccCCCCc
Confidence 346778899999888887766458888888887643
No 283
>PRK01424 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
Probab=38.43 E-value=66 Score=28.66 Aligned_cols=66 Identities=12% Similarity=0.213 Sum_probs=38.2
Q ss_pred HHHHHHHHHHCCCcEEEEeC-----CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 160 IDELVKKLKANNKNVYLISG-----GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg-----~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
..+++++|+++|+.+.-+|= .++.. - .=++.....+.+... -|+.-++.|++-
T Consensus 208 T~~ll~~L~~kGv~~a~vTLHVG~GTF~PV----~-~e~i~~H~MH~E~~~-----------------I~~eta~~In~a 265 (366)
T PRK01424 208 TKDILDKLKAKGIQTAFLTLHVGAGTFLPV----K-TENIHEHKMHTEYCS-----------------ITPETAEIINKA 265 (366)
T ss_pred CHHHHHHHHHCCCeEEEEEEeecCCCCcCc----c-ccccccCCccceEEE-----------------ECHHHHHHHHHH
Confidence 46899999999999877762 11111 0 001111112222221 155667788887
Q ss_pred HHHcCCCeEEEEecC
Q 025042 235 RKAHAYKVLAMIGDG 249 (259)
Q Consensus 235 ~~~~g~~~v~~vGDg 249 (259)
++. | .++++||=.
T Consensus 266 k~~-G-~RIiAVGTT 278 (366)
T PRK01424 266 KQE-G-RRIIAVGTT 278 (366)
T ss_pred HHc-C-CeEEEEecc
Confidence 776 6 799999943
No 284
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.84 E-value=25 Score=23.01 Aligned_cols=25 Identities=28% Similarity=0.425 Sum_probs=21.6
Q ss_pred HHHHHHHcCCCeEEEEecCcccHHhhh
Q 025042 231 VQQIRKAHAYKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 231 v~~l~~~~g~~~v~~vGDg~ND~~al~ 257 (259)
++++.+.+| -++++||-.-|++|++
T Consensus 7 VqQlLK~~G--~ivyfg~r~~~iemm~ 31 (68)
T COG4483 7 VQQLLKKFG--IIVYFGKRLYDIEMMQ 31 (68)
T ss_pred HHHHHHHCC--eeeecCCHHHHHHHHH
Confidence 678888887 6899999999999875
No 285
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=37.41 E-value=1.8e+02 Score=21.96 Aligned_cols=46 Identities=11% Similarity=0.150 Sum_probs=29.7
Q ss_pred CCCccHHHHHHHHHHCCCc-E-EEEeCCc------cccHHHHHHHcCCCCCcEeec
Q 025042 155 RLSPGIDELVKKLKANNKN-V-YLISGGF------RHMINPIASVLGIPPENIFAN 202 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~-v-~ivTg~~------~~~~~~i~~~lgi~~~~~~~~ 202 (259)
...+.+.++++.|++.|.. + +++-|.. .......++++|++ .+|..
T Consensus 66 ~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~--~vf~~ 119 (137)
T PRK02261 66 HGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGFD--RVFPP 119 (137)
T ss_pred cCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHHHHHHcCCC--EEECc
Confidence 4557888899999988653 3 3343432 23344678889986 67764
No 286
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=37.38 E-value=1.9e+02 Score=23.67 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHH-HHHHcCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINP-IASVLGI 194 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~-i~~~lgi 194 (259)
.+.+.++.|++.|.+++.+.|++...... +.+..|+
T Consensus 56 ~~~~~l~~L~~~~~~v~~v~GNHD~~~~~~~~~~~gi 92 (231)
T TIGR01854 56 SVAQAIRQVSDQGVPCYFMHGNRDFLIGKRFAREAGM 92 (231)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCchhhhHHHHHHCCC
Confidence 45667888888889999999998876543 4566676
No 287
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=36.76 E-value=48 Score=24.22 Aligned_cols=32 Identities=9% Similarity=-0.064 Sum_probs=25.5
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINP 187 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~ 187 (259)
-.++..+.++.+|++|.+++.+|+........
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPLAK 90 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcHHH
Confidence 34788888999999999999999876655443
No 288
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=36.62 E-value=1.2e+02 Score=22.75 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=31.0
Q ss_pred CCCccHHHHHHHHHHCCC-cEEEEeCCcc-------ccHHHHHHHcCCCCCcEeec
Q 025042 155 RLSPGIDELVKKLKANNK-NVYLISGGFR-------HMINPIASVLGIPPENIFAN 202 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~-~v~ivTg~~~-------~~~~~i~~~lgi~~~~~~~~ 202 (259)
.-.+.++++++.|+++|. .+.++-|+.. +..+..++++|++ .+|..
T Consensus 62 ~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv~--~vf~p 115 (128)
T cd02072 62 HGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGFD--RVFAP 115 (128)
T ss_pred CCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCCC--EEECc
Confidence 345778899999999987 4544444432 2234568889997 67754
No 289
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=35.99 E-value=84 Score=22.77 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=27.3
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
-.++..+.++.++++|.+++.+|++. + ....+++.+.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~-~-l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGG-K-LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCc-h-HHHHHHHcCC
Confidence 34678888999999999999999754 2 4445555554
No 290
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=35.47 E-value=22 Score=31.97 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.5
Q ss_pred CCChHHHHHHHHHHc----CC--CeEEEEec-----CcccHHh
Q 025042 224 SGGKAAAVQQIRKAH----AY--KVLAMIGD-----GATDLEV 255 (259)
Q Consensus 224 ~~~K~~~v~~l~~~~----g~--~~v~~vGD-----g~ND~~a 255 (259)
=.+|...++.+++-+ ++ ++++-||| |.||..+
T Consensus 347 IGdKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfka 389 (408)
T PF06437_consen 347 IGDKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFKA 389 (408)
T ss_pred cCCcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchhh
Confidence 357988888888887 66 89999999 6789876
No 291
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=35.26 E-value=20 Score=32.31 Aligned_cols=89 Identities=20% Similarity=0.152 Sum_probs=51.9
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHH-HcCCCCCcEeecceeec-----------------CCCc-----eeccc
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIAS-VLGIPPENIFANQLLFK-----------------SSGE-----FLGFD 216 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~-~lgi~~~~~~~~~l~~~-----------------~~~~-----~~g~~ 216 (259)
...++..+++.|.++.++|++.-........ .+|.+-..+|.-.+... +.|. .+|..
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~ 282 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL 282 (424)
T ss_pred cccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence 3348899999999999999988888877665 45633223333222110 1111 11111
Q ss_pred CCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCc
Q 025042 217 ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGA 250 (259)
Q Consensus 217 ~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ 250 (259)
...... ..+..+.+.......| ..++++||.+
T Consensus 283 e~~~~y-Sggs~~~~~~~l~~~g-~diLy~gdHi 314 (424)
T KOG2469|consen 283 EQGGVY-SGGSLKTVETSMKVKG-KDILYGGDHI 314 (424)
T ss_pred hhcccC-CcchHHHHHHHhcccc-cceeecccce
Confidence 101111 2256667777777667 7999999965
No 292
>PRK00147 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
Probab=35.24 E-value=74 Score=28.27 Aligned_cols=66 Identities=20% Similarity=0.283 Sum_probs=38.0
Q ss_pred HHHHHHHHHHCCCcEEEEeC-----CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 160 IDELVKKLKANNKNVYLISG-----GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg-----~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
..++++.|+++|+++.-+|= .++.. +.=++.....+.+... -|+.=++.|+..
T Consensus 186 t~~ll~~L~~kGv~~a~vTLHVG~GTF~PV-----~~edi~~H~mH~E~~~-----------------I~~~ta~~i~~a 243 (342)
T PRK00147 186 TEELLEKLKAKGVEIAFVTLHVGAGTFRPV-----RVEDIEEHKMHSEWYE-----------------VPQETADAINAA 243 (342)
T ss_pred CHHHHHHHHHCCCcEEEEEEeecCCCCcCc-----ccCccccCCcccEEEE-----------------ECHHHHHHHHHH
Confidence 46799999999999776661 11111 0001111112222222 155667788887
Q ss_pred HHHcCCCeEEEEecC
Q 025042 235 RKAHAYKVLAMIGDG 249 (259)
Q Consensus 235 ~~~~g~~~v~~vGDg 249 (259)
++. | .++++||=+
T Consensus 244 k~~-G-~rIiAVGTT 256 (342)
T PRK00147 244 KAR-G-GRVIAVGTT 256 (342)
T ss_pred HHc-C-CeEEEEccc
Confidence 776 6 689999843
No 293
>COG1535 EntB Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=34.48 E-value=62 Score=26.00 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=14.7
Q ss_pred HHHHHHHHCCCcEEEEeCC
Q 025042 162 ELVKKLKANNKNVYLISGG 180 (259)
Q Consensus 162 e~l~~Lk~~g~~v~ivTg~ 180 (259)
+++++||+.|..-.|+||-
T Consensus 133 ~Llq~lr~~grdQLIItGV 151 (218)
T COG1535 133 PLLQMLREKGRDQLIITGV 151 (218)
T ss_pred hHHHHHHHcCCCcEEEeeh
Confidence 4778888888887888873
No 294
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=34.36 E-value=58 Score=23.30 Aligned_cols=38 Identities=32% Similarity=0.387 Sum_probs=31.0
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
+...++.+++++.|+.++.+|.+.....+.+.+..+++
T Consensus 46 ~~l~~~~~~~~~~~~~vi~is~d~~~~~~~~~~~~~~~ 83 (124)
T PF00578_consen 46 PELNELYKKYKDKGVQVIGISTDDPEEIKQFLEEYGLP 83 (124)
T ss_dssp HHHHHHHHHHHTTTEEEEEEESSSHHHHHHHHHHHTCS
T ss_pred hHHHHHhhhhccceEEeeecccccccchhhhhhhhccc
Confidence 45667778888889999999999888888888877764
No 295
>PF11549 Sec31: Protein transport protein SEC31; InterPro: IPR021614 Sec31 is involved in COPII coat formation as it forms through the sequential binding of three cytoplasmic proteins: Sar1, Sec23/24 and Sec13/31. Sec13/31 is recruited by the pre-budding complex and polymerisation of Sec13/31 occurs to form an octahedral cage that is the outer shell of the COPII coat []. Sec13/31 is a hetero-tetramer which is organised as a linear array of alpha-solenoid and beta-propeller domains to form a rod in which twenty-four copies assemble to form the COPII cub-octahedron []. ; PDB: 2QTV_D.
Probab=33.52 E-value=15 Score=22.49 Aligned_cols=8 Identities=50% Similarity=0.758 Sum_probs=3.0
Q ss_pred cCcccHHh
Q 025042 248 DGATDLEV 255 (259)
Q Consensus 248 Dg~ND~~a 255 (259)
||.||+|+
T Consensus 24 dGWNDLpl 31 (51)
T PF11549_consen 24 DGWNDLPL 31 (51)
T ss_dssp S-TT---S
T ss_pred Ccccccch
Confidence 78888875
No 296
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=33.11 E-value=55 Score=23.89 Aligned_cols=39 Identities=23% Similarity=0.235 Sum_probs=27.5
Q ss_pred CCccHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcCC
Q 025042 156 LSPGIDELVKKLKANNKN-VYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lgi 194 (259)
+.+...++++++.+.|++ +++.+|...+.+...+++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 345678899999999988 777788778888888999988
No 297
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=33.03 E-value=54 Score=25.72 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=27.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIA 189 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~ 189 (259)
-.+++.+.++.+|++|.+++.+|+.........+
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~~a 117 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPESTLGKLA 117 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHHhC
Confidence 4577888889999999999999997766655544
No 298
>PF02547 Queuosine_synth: Queuosine biosynthesis protein; InterPro: IPR003699 This entry represents the queuosine biosynthesis proteins QueA. Queuosine is a hypermodified nucleoside that usually occurs in the first position of the anticodon of tRNAs specifying the amino acids asparagine, aspartate, histidine, and tyrosine. The hypermodified nucleoside is found in bacteria and eukaryotes []. Queuosine is synthesized de novo exclusively in bacteria; for eukaryotes the compound is a nutrient factor. Queuosine biosynthesis protein, or S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (QueA) catalyses the formation of the 2,3-epoxy-4,5-dihydroxycyclopentane ring of the Q precursor epoxyqueuosine (oQ). S-adenosyl-L-methionine (AdoMet) reacts with 7-aminomethyl-7-deazaguanine of tRNA at position 34 to yield adenine, methionine, and a modified tRNA with oQ at position 34. QueA consists of two domains: domain 1 has 3 layers alpha/beta/alpha, while domain 2 is a closed beta-barrel with Greek-key topology [].; GO: 0016740 transferase activity, 0016853 isomerase activity, 0008616 queuosine biosynthetic process; PDB: 1WDI_A 1VKY_B 1YY3_A.
Probab=32.80 E-value=53 Score=29.13 Aligned_cols=66 Identities=18% Similarity=0.329 Sum_probs=32.4
Q ss_pred HHHHHHHHHHCCCcEEEEe---CCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042 160 IDELVKKLKANNKNVYLIS---GGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK 236 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivT---g~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~ 236 (259)
..++++.|+++|+++.-+| |-.. -+++- .-++.....+.+...+ |+.=++.|++.++
T Consensus 186 t~~ll~~l~~kGv~~a~vTLHVG~GT--F~pV~-~e~i~~H~mh~E~~~I-----------------~~~ta~~i~~ak~ 245 (341)
T PF02547_consen 186 TEELLERLKAKGVEIAFVTLHVGLGT--FRPVR-VEDIEEHKMHSEYYEI-----------------PEETAEAINKAKA 245 (341)
T ss_dssp -HHHHHHHHHHTEEEEEEEEEECGGG--G----------------EEEEE------------------HHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEEEEeccCc--ccccC-cCcccCCCCcceEEEE-----------------CHHHHHHHHHHHH
Confidence 5689999999999977665 2111 11111 0011111223333322 5556677888777
Q ss_pred HcCCCeEEEEe
Q 025042 237 AHAYKVLAMIG 247 (259)
Q Consensus 237 ~~g~~~v~~vG 247 (259)
+ | .++++||
T Consensus 246 ~-G-~RViAVG 254 (341)
T PF02547_consen 246 E-G-GRVIAVG 254 (341)
T ss_dssp T-T---EEEES
T ss_pred h-C-CcEEEEc
Confidence 6 6 7999998
No 299
>cd06259 YdcF-like YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.
Probab=32.07 E-value=1.5e+02 Score=22.19 Aligned_cols=76 Identities=14% Similarity=0.245 Sum_probs=41.7
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccc--------cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042 160 IDELVKKLKANNKNVYLISGGFRH--------MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV 231 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~--------~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v 231 (259)
....++..++.....+++||+... .....+...|++.+.++.+.- .. .-...+...
T Consensus 23 ~~~a~~l~~~~~~~~ii~sGg~~~~~~~~ea~~m~~~l~~~gv~~~~I~~e~~-----s~-----------~T~ena~~~ 86 (150)
T cd06259 23 LDAAAELYRAGPAPKLIVSGGQGPGEGYSEAEAMARYLIELGVPAEAILLEDR-----ST-----------NTYENARFS 86 (150)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHcCCCHHHeeecCC-----CC-----------CHHHHHHHH
Confidence 344555556665778899998543 234455667776333332210 00 012345556
Q ss_pred HHHHHHcCCCeEEEEecCcc
Q 025042 232 QQIRKAHAYKVLAMIGDGAT 251 (259)
Q Consensus 232 ~~l~~~~g~~~v~~vGDg~N 251 (259)
..+.++.+++.++.|-|..+
T Consensus 87 ~~~~~~~~~~~i~lVTs~~H 106 (150)
T cd06259 87 AELLRERGIRSVLLVTSAYH 106 (150)
T ss_pred HHHHHhcCCCeEEEECCHHH
Confidence 66666666667777776543
No 300
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=31.74 E-value=52 Score=28.74 Aligned_cols=30 Identities=43% Similarity=0.643 Sum_probs=26.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
++.++|++.++++.++++|..+.+.|++..
T Consensus 82 EPLL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 82 EPLLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred cccccccHHHHHHHHHHcCCeEEEecCcee
Confidence 578899999999999999999999999854
No 301
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=31.63 E-value=1e+02 Score=24.25 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=25.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
.+.++++..++++.+++.|+.+.+.|++..
T Consensus 72 EPll~~~l~~li~~~~~~g~~v~i~TNg~~ 101 (191)
T TIGR02495 72 EPTLQAGLPDFLRKVRELGFEVKLDTNGSN 101 (191)
T ss_pred cccCcHhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 366778899999999999999999998864
No 302
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=31.44 E-value=2.3e+02 Score=25.17 Aligned_cols=80 Identities=21% Similarity=0.280 Sum_probs=44.9
Q ss_pred ccHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042 158 PGIDELVKKLKANNKN-VYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK 236 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~ 236 (259)
|=..-.|++|++.|+. +++.++-.. +.+.+.++-. ..+...+.+..+ ..|.+=+..+.+...
T Consensus 33 Pii~~~l~~L~~~Gv~eivi~~~y~~---~~i~~~~~d~--~~~~~~I~y~~e------------~~~lGTag~l~~a~~ 95 (358)
T COG1208 33 PLIEYVLEALAAAGVEEIVLVVGYLG---EQIEEYFGDG--EGLGVRITYVVE------------KEPLGTAGALKNALD 95 (358)
T ss_pred cHHHHHHHHHHHCCCcEEEEEeccch---HHHHHHHhcc--cccCCceEEEec------------CCcCccHHHHHHHHH
Confidence 5667788999999998 555544433 3333333321 000111111000 013345667888877
Q ss_pred HcCC-CeEEEEecCcccHH
Q 025042 237 AHAY-KVLAMIGDGATDLE 254 (259)
Q Consensus 237 ~~g~-~~v~~vGDg~ND~~ 254 (259)
.++- .-+++-||..+|++
T Consensus 96 ~l~~~~f~v~~GDv~~~~d 114 (358)
T COG1208 96 LLGGDDFLVLNGDVLTDLD 114 (358)
T ss_pred hcCCCcEEEEECCeeeccC
Confidence 7743 56778899999965
No 303
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=31.38 E-value=68 Score=23.23 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=25.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHH
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPI 188 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i 188 (259)
.-.++..+.++.+|++|.+++.+|+.........
T Consensus 64 g~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ 97 (131)
T PF01380_consen 64 GETRELIELLRFAKERGAPVILITSNSESPLARL 97 (131)
T ss_dssp STTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHH
T ss_pred ccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhh
Confidence 3457788888999999999999998766544443
No 304
>TIGR00113 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase. This model describes the enzyme for S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA). QueA synthesizes Queuosine which is usually in the first position of the anticodon of tRNAs specific for asparagine, aspartate, histidine, and tyrosine.
Probab=31.25 E-value=91 Score=27.72 Aligned_cols=66 Identities=21% Similarity=0.239 Sum_probs=37.8
Q ss_pred HHHHHHHHHHCCCcEEEEeC-----CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 160 IDELVKKLKANNKNVYLISG-----GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg-----~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
..++++.|+++|+.+.-+|= .++..- .=++.....+.+... -|+.=++.|++-
T Consensus 187 t~~ll~~l~~kGv~~a~vTLHVG~GTF~PV~-----~e~i~~H~mH~E~~~-----------------v~~~ta~~i~~a 244 (344)
T TIGR00113 187 SEELLEKLKAKGVQYAFITLHVGAGTFRPVE-----ADNIEDHVMHAEYYE-----------------VPQETVEALNKT 244 (344)
T ss_pred CHHHHHHHHHCCCeEEEEEEeecCCCCcCcc-----ccccccCCcccEEEE-----------------ECHHHHHHHHHH
Confidence 46899999999999776651 221110 001111112222221 155667778777
Q ss_pred HHHcCCCeEEEEecC
Q 025042 235 RKAHAYKVLAMIGDG 249 (259)
Q Consensus 235 ~~~~g~~~v~~vGDg 249 (259)
++. | .++++||=+
T Consensus 245 k~~-G-~RIiAVGTT 257 (344)
T TIGR00113 245 REN-G-GRIIAVGTT 257 (344)
T ss_pred HHc-C-CeEEEEccc
Confidence 776 6 689999843
No 305
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=31.04 E-value=58 Score=23.69 Aligned_cols=30 Identities=13% Similarity=0.077 Sum_probs=23.7
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCccccHH
Q 025042 157 SPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~ 186 (259)
.+...+.++.++++|.+++.+|+.......
T Consensus 73 ~~~~~~~~~~a~~~g~~iv~iT~~~~~~l~ 102 (139)
T cd05013 73 TKETVEAAEIAKERGAKVIAITDSANSPLA 102 (139)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCCCChhH
Confidence 366788889999999999999987654433
No 306
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=30.84 E-value=2.4e+02 Score=25.74 Aligned_cols=18 Identities=28% Similarity=0.298 Sum_probs=15.6
Q ss_pred hccCcCEEEEeCCCcccc
Q 025042 79 LWRTADAVCFDVDSTVCV 96 (259)
Q Consensus 79 ~~~~~k~vvFD~DGTLt~ 96 (259)
.+.++.++-||+|+||..
T Consensus 23 ~l~~i~~~GfdmDyTL~~ 40 (424)
T KOG2469|consen 23 NLENIGIVGFDMDYTLAR 40 (424)
T ss_pred hhhcCcEEeeccccchhh
Confidence 467899999999999954
No 307
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=30.78 E-value=1.4e+02 Score=21.87 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=28.7
Q ss_pred CCCccHHHHHHHHHHCCC-cEEEEeCCcccc-HHHHHHHcCCCCCcEee
Q 025042 155 RLSPGIDELVKKLKANNK-NVYLISGGFRHM-INPIASVLGIPPENIFA 201 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~-~v~ivTg~~~~~-~~~i~~~lgi~~~~~~~ 201 (259)
...+.++++++.|++.|. ++.++-|+.... ....+.++|++ .+|.
T Consensus 62 ~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d--~~~~ 108 (122)
T cd02071 62 GHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVA--EIFG 108 (122)
T ss_pred hhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCC--EEEC
Confidence 345677889999999876 444444543333 24456689987 5554
No 308
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=30.71 E-value=67 Score=29.80 Aligned_cols=37 Identities=19% Similarity=0.386 Sum_probs=22.1
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
+..++=+.|++.|+++++..|+.......++++.+++
T Consensus 56 sL~~L~~~L~~~G~~L~v~~G~p~~vl~~l~~~~~~~ 92 (471)
T TIGR03556 56 CLQELQQRYQQAGSQLLILQGDPVQLIPQLAQQLGAK 92 (471)
T ss_pred HHHHHHHHHHHCCCCeEEEECCHHHHHHHHHHHcCCC
Confidence 4444555566666666666666666666666666654
No 309
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=29.97 E-value=43 Score=25.09 Aligned_cols=18 Identities=17% Similarity=0.285 Sum_probs=14.6
Q ss_pred HHhccCcCEEEEeCCCcc
Q 025042 77 LQLWRTADAVCFDVDSTV 94 (259)
Q Consensus 77 ~e~~~~~k~vvFD~DGTL 94 (259)
+-++.....+.||+.+||
T Consensus 39 ~~~~~~P~iV~FDmK~Tl 56 (128)
T PRK13717 39 IVRLNAPVTAAFNMKQTV 56 (128)
T ss_pred HhhcCCCeEEEEehHHHH
Confidence 345667789999999998
No 310
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=29.22 E-value=2.1e+02 Score=26.14 Aligned_cols=74 Identities=24% Similarity=0.317 Sum_probs=44.7
Q ss_pred ccHHHHHHHHHHCCCc--EEEEeCCccccHHHH-HHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042 158 PGIDELVKKLKANNKN--VYLISGGFRHMINPI-ASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI 234 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~--v~ivTg~~~~~~~~i-~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l 234 (259)
.|+..++..+.+.+.. ++-.|+++...+.+. +++||++ ++.+ .|...|.-| ++++
T Consensus 99 RGa~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~Lgip-----aTIV--------------mP~~tp~~k---iq~~ 156 (457)
T KOG1250|consen 99 RGAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIP-----ATIV--------------MPVATPLMK---IQRC 156 (457)
T ss_pred hhHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCc-----eEEE--------------ecCCChHHH---HHHH
Confidence 4888889888666533 666677777766655 5689997 2221 011233333 3333
Q ss_pred HHHcCCCeEEEEecCcccHHh
Q 025042 235 RKAHAYKVLAMIGDGATDLEV 255 (259)
Q Consensus 235 ~~~~g~~~v~~vGDg~ND~~a 255 (259)
+ .+| .+|+..|+...-+.+
T Consensus 157 ~-nlG-A~Vil~G~~~deAk~ 175 (457)
T KOG1250|consen 157 R-NLG-ATVILSGEDWDEAKA 175 (457)
T ss_pred h-ccC-CEEEEecccHHHHHH
Confidence 3 337 699999987654443
No 311
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=28.88 E-value=70 Score=26.25 Aligned_cols=30 Identities=7% Similarity=0.090 Sum_probs=24.4
Q ss_pred CCCCcc-HHHHHHHHHHCCCcEEEEeCCccc
Q 025042 154 PRLSPG-IDELVKKLKANNKNVYLISGGFRH 183 (259)
Q Consensus 154 ~~~~p~-~~e~l~~Lk~~g~~v~ivTg~~~~ 183 (259)
+.+.++ +.++++.+|+.|+++.+.|++...
T Consensus 49 Pllq~~fl~~l~~~~k~~gi~~~leTnG~~~ 79 (213)
T PRK10076 49 VLMQAEFATRFLQRLRLWGVSCAIETAGDAP 79 (213)
T ss_pred HHcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 445566 578999999999999999998543
No 312
>TIGR00591 phr2 photolyase PhrII. All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=28.84 E-value=78 Score=29.13 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=21.1
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
+..++=+.|++.|+++++..|+.......++++.++.
T Consensus 79 sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~i~ 115 (454)
T TIGR00591 79 GLDEVANECERLIIPFHLLDGPPKELLPYFVDLHAAA 115 (454)
T ss_pred HHHHHHHHHHHcCCceEEeecChHHHHHHHHHHcCCC
Confidence 4444445555666666666666555555555555554
No 313
>TIGR02766 crypt_chrom_pln cryptochrome, plant family. At least five major families of cryptochomes and photolyases share FAD cofactor binding, sequence homology, and the ability to react to short wavelengths of visible light. Photolysases are responsible for light-dependent DNA repair by removal of two types of uv-induced DNA dimerizations. Cryptochromes have other functions, often regulatory and often largely unknown, which may include circadian clock entrainment and control of development. Members of this subfamily are known so far only in plants; they may show some photolyase activity in vitro but appear mostly to be regulatory proteins that respond to blue light.
Probab=28.84 E-value=1.7e+02 Score=27.13 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=34.0
Q ss_pred ccHHHHHHHHHHCCCcEEEE-eCCccccHHHHHHHcCCCCCcEeecc
Q 025042 158 PGIDELVKKLKANNKNVYLI-SGGFRHMINPIASVLGIPPENIFANQ 203 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~iv-Tg~~~~~~~~i~~~lgi~~~~~~~~~ 203 (259)
....++=+.|++.|.+++++ .|+.......++++.+++ .+|.+.
T Consensus 51 ~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~i~--~v~~~~ 95 (475)
T TIGR02766 51 QSLAHLDQSLRSLGTCLVTIRSTDTVAALLDCVRSTGAT--RLFFNH 95 (475)
T ss_pred HHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHHHcCCC--EEEEec
Confidence 35566667888999998877 467788888888899987 777764
No 314
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=28.76 E-value=99 Score=23.00 Aligned_cols=30 Identities=20% Similarity=0.111 Sum_probs=12.1
Q ss_pred HHHHHHCCCcEEEEeCCccccHHHHHHHcC
Q 025042 164 VKKLKANNKNVYLISGGFRHMINPIASVLG 193 (259)
Q Consensus 164 l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lg 193 (259)
.+++++.|+.++.++.+..+.++.++++.+
T Consensus 55 ~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~ 84 (149)
T cd03018 55 LELFEAAGAEVLGISVDSPFSLRAWAEENG 84 (149)
T ss_pred HHHHHhCCCEEEEecCCCHHHHHHHHHhcC
Confidence 333334444444444443333333444333
No 315
>COG2237 Predicted membrane protein [Function unknown]
Probab=28.53 E-value=1.7e+02 Score=26.22 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCc--EEEEeCCcc
Q 025042 160 IDELVKKLKANNKN--VYLISGGFR 182 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~--v~ivTg~~~ 182 (259)
+-...++||+.|-. +..+||++.
T Consensus 53 alkiydeLk~~geDveIA~vsG~~~ 77 (364)
T COG2237 53 ALKIYDELKAKGEDVEIAVVSGDKD 77 (364)
T ss_pred HHHHHHHHhccCCceEEEEEecCCC
Confidence 34567788888744 788999866
No 316
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=27.64 E-value=2.9e+02 Score=21.33 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=49.3
Q ss_pred CCCCccHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042 154 PRLSPGIDELVKKLKANNKN-VYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ 232 (259)
Q Consensus 154 ~~~~p~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~ 232 (259)
..+.+-..+++...++.+-. ..++.|........-+...|.+ .++.-. +..+ ..+.++.-..++.
T Consensus 11 g~l~~~s~el~~~A~~l~~~v~~v~~G~~~~~~~~~~~~~Gad--~v~~~~-----~~~~-------~~~~~~~~a~al~ 76 (168)
T cd01715 11 GELRELTLEAVTAARKLGGEVTALVIGSGAEAVAAALKAYGAD--KVLVAE-----DPAL-------AHYLAEPYAPALV 76 (168)
T ss_pred CChHHHHHHHHHHHHHhCCCEEEEEECCChHHHHHHHHhcCCC--EEEEec-----Chhh-------cccChHHHHHHHH
Confidence 35677788888887776534 4455565433322333456775 443311 1111 1124566778888
Q ss_pred HHHHHcCCCeEEEEecCccc
Q 025042 233 QIRKAHAYKVLAMIGDGATD 252 (259)
Q Consensus 233 ~l~~~~g~~~v~~vGDg~ND 252 (259)
.+.++.+ ..++.+|.+.+.
T Consensus 77 ~~i~~~~-p~~Vl~~~t~~g 95 (168)
T cd01715 77 ALAKKEK-PSHILAGATSFG 95 (168)
T ss_pred HHHHhcC-CCEEEECCCccc
Confidence 8887766 588899988764
No 317
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=27.48 E-value=3.7e+02 Score=22.56 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
.....|+++.+.|+++.+++|+-.-.-.......|++
T Consensus 32 ~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~g~~ 68 (238)
T COG0528 32 RIANEIKELVDLGVEVAVVVGGGNIARGYIGAAAGMD 68 (238)
T ss_pred HHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHHcCCc
Confidence 3445677778889999999988555544444445665
No 318
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=27.45 E-value=1.1e+02 Score=22.37 Aligned_cols=14 Identities=21% Similarity=0.038 Sum_probs=6.2
Q ss_pred HHHHHCCCcEEEEe
Q 025042 165 KKLKANNKNVYLIS 178 (259)
Q Consensus 165 ~~Lk~~g~~v~ivT 178 (259)
+++++.+....+++
T Consensus 73 ~~~~~~~~~~~~l~ 86 (140)
T cd03017 73 KFAEKYGLPFPLLS 86 (140)
T ss_pred HHHHHhCCCceEEE
Confidence 33444444444444
No 319
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=27.17 E-value=2.9e+02 Score=21.59 Aligned_cols=19 Identities=21% Similarity=0.688 Sum_probs=9.9
Q ss_pred HHHHHHHHHCCCcEEEEeC
Q 025042 161 DELVKKLKANNKNVYLISG 179 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg 179 (259)
.++++.+.+.+.+++++-+
T Consensus 38 ~~l~~~~~~~~~~ifllG~ 56 (172)
T PF03808_consen 38 PDLLRRAEQRGKRIFLLGG 56 (172)
T ss_pred HHHHHHHHHcCCeEEEEeC
Confidence 3445555555555555543
No 320
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=26.25 E-value=72 Score=24.96 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=24.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCcccc
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~ 184 (259)
.-.+++.+.++.+|++|.+++.+|+.....
T Consensus 112 G~t~~~i~~~~~ak~~Ga~vI~IT~~~~s~ 141 (177)
T cd05006 112 GNSPNVLKALEAAKERGMKTIALTGRDGGK 141 (177)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 345788899999999999999999875544
No 321
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=25.86 E-value=1.3e+02 Score=26.60 Aligned_cols=30 Identities=27% Similarity=0.349 Sum_probs=25.8
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
.+.++|+..++++.+++.|+.+.+.|++..
T Consensus 63 EPll~~~~~~ii~~~~~~g~~~~l~TNG~l 92 (358)
T TIGR02109 63 EPLARPDLVELVAHARRLGLYTNLITSGVG 92 (358)
T ss_pred cccccccHHHHHHHHHHcCCeEEEEeCCcc
Confidence 467889999999999999998899998853
No 322
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=25.78 E-value=81 Score=24.75 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=26.3
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPI 188 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i 188 (259)
-.+++.++++.++++|.+++.+|+.........
T Consensus 87 ~t~~~i~~~~~ak~~g~~iI~IT~~~~s~la~~ 119 (179)
T cd05005 87 ETSSVVNAAEKAKKAGAKVVLITSNPDSPLAKL 119 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHHh
Confidence 457788889999999999999998766655443
No 323
>PRK13937 phosphoheptose isomerase; Provisional
Probab=25.63 E-value=78 Score=25.22 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=25.3
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINP 187 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~ 187 (259)
-.+++.+.++.+|++|.+++.+|+........
T Consensus 118 ~t~~~~~~~~~ak~~g~~~I~iT~~~~s~L~~ 149 (188)
T PRK13937 118 NSPNVLAALEKARELGMKTIGLTGRDGGKMKE 149 (188)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCCCCChhHH
Confidence 45788889999999999999999865544433
No 324
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=25.52 E-value=91 Score=20.62 Aligned_cols=23 Identities=13% Similarity=0.001 Sum_probs=20.1
Q ss_pred CCccHHHHHHHHHHCCCcEEEEe
Q 025042 156 LSPGIDELVKKLKANNKNVYLIS 178 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivT 178 (259)
-.++..++++.+|++|.+++.+|
T Consensus 59 ~t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 59 RTEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEe
Confidence 35788899999999999998888
No 325
>TIGR03489 cas_csp1 CRISPR-associated protein, Csp1 family. Members of this protein family are Csp1, a CRISPR-associated (cas) gene marker for the Pging subtype of CRISPR/cas system, as found in Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This protein belongs to the family of DevR (TIGR01875), a regulator of development in Myxococcus xanthus located in a cas gene region. A different branch of the DevR family, Cst2 (TIGR02585), is a marker for the Tneap subtype of CRISPR/cas system.
Probab=25.23 E-value=68 Score=27.21 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=25.3
Q ss_pred CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhh
Q 025042 223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSI 257 (259)
Q Consensus 223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~ 257 (259)
..+.|.+++..|.++ ...+||||...|-..+.
T Consensus 231 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 262 (292)
T TIGR03489 231 DEKEKANIIAELDER---GAKCFIGDDASDKSVAD 262 (292)
T ss_pred chHHHhhHHHHHHhh---CCeEEecCCcchhhHHH
Confidence 356799999999887 47889999998876543
No 326
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=24.57 E-value=1.3e+02 Score=26.77 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=25.9
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
++.++|+..++++.+++.|+.+.|.|++..
T Consensus 72 EPll~~~~~~il~~~~~~g~~~~i~TNG~l 101 (378)
T PRK05301 72 EPLLRKDLEELVAHARELGLYTNLITSGVG 101 (378)
T ss_pred ccCCchhHHHHHHHHHHcCCcEEEECCCcc
Confidence 467889999999999999998899998854
No 327
>cd03013 PRX5_like Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol. The cellular location of PRX5 suggests that it may have an important antioxidant role in organelles that are major sources of reactive oxygen species (ROS), as well as a role in the control of signal transduction. PRX5 has been shown to reduce hydrogen peroxide, alkyl hydroperoxides and peroxynitrite. As with all other PRXs, the N-terminal peroxidatic cysteine of PRX5 is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Human PRX5 is able to resolve this intermediate by forming an intramolecular disulfide bond with its C-terminal cysteine (the resolving cysteine), which can then be reduced by TRX, just like an atypical 2-cys PRX. This resolving cysteine, however, is not conserved in other members of the subfamily. In such cases
Probab=24.51 E-value=1.3e+02 Score=23.16 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcCC
Q 025042 159 GIDELVKKLKANNKN-VYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lgi 194 (259)
...+..+++++.|.. ++.+|.|..+..+.+.++.++
T Consensus 52 ~~~~~~~~f~~~g~~~V~~iS~D~~~~~~~~~~~~~~ 88 (155)
T cd03013 52 GYVENADELKAKGVDEVICVSVNDPFVMKAWGKALGA 88 (155)
T ss_pred HHHHhHHHHHHCCCCEEEEEECCCHHHHHHHHHhhCC
Confidence 445566777888884 888888888888888888776
No 328
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=24.30 E-value=2.5e+02 Score=22.28 Aligned_cols=27 Identities=19% Similarity=0.484 Sum_probs=13.4
Q ss_pred HHHHHHHHHCCCcEEEEeCCccccHHHH
Q 025042 161 DELVKKLKANNKNVYLISGGFRHMINPI 188 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i 188 (259)
.++++...++|.+++++ |+.+..++..
T Consensus 38 ~~l~~~~~~~~~~vfll-G~~~~v~~~~ 64 (177)
T TIGR00696 38 EELCQRAGKEKLPIFLY-GGKPDVLQQL 64 (177)
T ss_pred HHHHHHHHHcCCeEEEE-CCCHHHHHHH
Confidence 34455555556666665 3444444333
No 329
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=24.09 E-value=44 Score=30.87 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=12.8
Q ss_pred hccCcCEEEEeCCCcccc
Q 025042 79 LWRTADAVCFDVDSTVCV 96 (259)
Q Consensus 79 ~~~~~k~vvFD~DGTLt~ 96 (259)
.|++++++=||+|-||..
T Consensus 8 ~l~~i~~iGFDmDyTLa~ 25 (448)
T PF05761_consen 8 NLKDIDVIGFDMDYTLAR 25 (448)
T ss_dssp ECCC--EEEE-TBTTTBE
T ss_pred ccccCCEEEECcccchhh
Confidence 468899999999999954
No 330
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=23.98 E-value=1.3e+02 Score=24.51 Aligned_cols=29 Identities=34% Similarity=0.476 Sum_probs=23.9
Q ss_pred CCCCCccH-HHHHHHHHHCCCcEEEEeCCc
Q 025042 153 PPRLSPGI-DELVKKLKANNKNVYLISGGF 181 (259)
Q Consensus 153 ~~~~~p~~-~e~l~~Lk~~g~~v~ivTg~~ 181 (259)
.+.++++. .++++.+++.|+++.+.|++.
T Consensus 75 EPll~~~~~~~li~~~~~~g~~~~i~TNG~ 104 (235)
T TIGR02493 75 EPLLQPEFLSELFKACKELGIHTCLDTSGF 104 (235)
T ss_pred ccccCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 35677774 589999999999999999884
No 331
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=23.78 E-value=51 Score=28.08 Aligned_cols=39 Identities=18% Similarity=0.405 Sum_probs=27.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
.-||+..++|....+. +.+++.|++....+.+++..|+=
T Consensus 131 ~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~ 169 (262)
T KOG1605|consen 131 RKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDP 169 (262)
T ss_pred EcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccC
Confidence 4467777777776654 56677777777777777777653
No 332
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=23.74 E-value=1.4e+02 Score=25.50 Aligned_cols=35 Identities=26% Similarity=0.247 Sum_probs=29.1
Q ss_pred cHHHHHHHHHHCCCc-EEEEeCCccccHHHHHHHcC
Q 025042 159 GIDELVKKLKANNKN-VYLISGGFRHMINPIASVLG 193 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~-v~ivTg~~~~~~~~i~~~lg 193 (259)
-+.++++.|.+.|+. +++.|=+..+.+..+++.+|
T Consensus 252 ~a~e~~~~l~~~gv~GvH~~t~n~~~~~~~il~~lg 287 (287)
T PF02219_consen 252 IAVELIRELLAEGVPGVHLYTMNREELVPEILENLG 287 (287)
T ss_dssp HHHHHHHHHHHTT-SEEEEEETTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 356788889889955 89999999999999999887
No 333
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=23.72 E-value=1.8e+02 Score=26.36 Aligned_cols=84 Identities=21% Similarity=0.353 Sum_probs=48.3
Q ss_pred HHHHHHHHHCC-Cc-EEEEeCCcc--ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042 161 DELVKKLKANN-KN-VYLISGGFR--HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK 236 (259)
Q Consensus 161 ~e~l~~Lk~~g-~~-v~ivTg~~~--~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~ 236 (259)
..+++.+++.+ .. .+++||-++ +....+++.+++..-++.-+.. .++.-.+.. -..=...+..+.+
T Consensus 20 apli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~---~~~~tl~~~-------t~~~i~~~~~vl~ 89 (383)
T COG0381 20 APLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIM---KPGQTLGEI-------TGNIIEGLSKVLE 89 (383)
T ss_pred hHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhcc---ccCCCHHHH-------HHHHHHHHHHHHH
Confidence 35778888776 55 778899999 8889999999997212222211 000000000 0011224445555
Q ss_pred HcCCCeEEEEecCcccHH
Q 025042 237 AHAYKVLAMIGDGATDLE 254 (259)
Q Consensus 237 ~~g~~~v~~vGDg~ND~~ 254 (259)
+..-+-|++-||...=+.
T Consensus 90 ~~kPD~VlVhGDT~t~lA 107 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLA 107 (383)
T ss_pred hhCCCEEEEeCCcchHHH
Confidence 444367888899877555
No 334
>PF09432 THP2: Tho complex subunit THP2; InterPro: IPR018557 The THO complex plays a role in coupling transcription elongation to mRNA export. It is composed of subunits THP2, HPR1, THO2 and MFT1 [].
Probab=23.70 E-value=15 Score=27.43 Aligned_cols=25 Identities=28% Similarity=0.429 Sum_probs=16.8
Q ss_pred HHHHHHHHcCCCeEEEEecCcccHH
Q 025042 230 AVQQIRKAHAYKVLAMIGDGATDLE 254 (259)
Q Consensus 230 ~v~~l~~~~g~~~v~~vGDg~ND~~ 254 (259)
-+.+|.+.+.-=+-+|||||.|-+.
T Consensus 93 EVn~Wr~ewd~iE~~mFGD~pnSmk 117 (132)
T PF09432_consen 93 EVNYWRKEWDNIEMLMFGDGPNSMK 117 (132)
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHH
Confidence 4556666553127889999999654
No 335
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=23.67 E-value=4.8e+02 Score=22.53 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=43.8
Q ss_pred CCCccHHHHHHHHHHCCCc-EEEEeCC-ccccHHHHH---HHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042 155 RLSPGIDELVKKLKANNKN-VYLISGG-FRHMINPIA---SVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA 229 (259)
Q Consensus 155 ~~~p~~~e~l~~Lk~~g~~-v~ivTg~-~~~~~~~i~---~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~ 229 (259)
.-+|-..--|..|...|++ +.++++. .....+.+. .++|++ --|+.+ ..|..=++
T Consensus 29 ~~KPmi~y~l~~L~~aGI~dI~II~~~~~~~~~~~llGdgs~~gv~--itY~~Q------------------~~p~GlA~ 88 (286)
T COG1209 29 YDKPMIYYPLETLMLAGIRDILIVVGPEDKPTFKELLGDGSDFGVD--ITYAVQ------------------PEPDGLAH 88 (286)
T ss_pred cCcchhHhHHHHHHHcCCceEEEEecCCchhhhhhhhcCccccCcc--eEEEec------------------CCCCcHHH
Confidence 3467777889999999998 7777765 333333332 234443 122222 13455666
Q ss_pred HHHHHHHHcCC-CeEEEEecCc
Q 025042 230 AVQQIRKAHAY-KVLAMIGDGA 250 (259)
Q Consensus 230 ~v~~l~~~~g~-~~v~~vGDg~ 250 (259)
++..-.+..+- +-+++-||+.
T Consensus 89 Av~~a~~fv~~~~f~l~LGDNi 110 (286)
T COG1209 89 AVLIAEDFVGDDDFVLYLGDNI 110 (286)
T ss_pred HHHHHHhhcCCCceEEEecCce
Confidence 66644444332 5677778875
No 336
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=23.64 E-value=1.4e+02 Score=20.95 Aligned_cols=35 Identities=14% Similarity=0.085 Sum_probs=29.9
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
+...++.|.++|++++.-+.+..+..+...+.+|.
T Consensus 41 ~~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~lg~ 75 (89)
T PF08444_consen 41 MYHLAQYLHKLGFPFYGHVDEDNEASQRLSKSLGF 75 (89)
T ss_pred HHHHHHHHHHCCCCeEeehHhccHHHHHHHHHCCC
Confidence 34567889999999999998888888999999986
No 337
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=23.58 E-value=4.9e+02 Score=22.64 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=13.8
Q ss_pred CChHHHHHHHHHHcCCCeEEEEecCc
Q 025042 225 GGKAAAVQQIRKAHAYKVLAMIGDGA 250 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~~~v~~vGDg~ 250 (259)
..|.+..-+-..+.| -+++.+||.-
T Consensus 99 V~k~~~~v~~~~~~G-y~vvi~G~~~ 123 (298)
T PRK01045 99 VTKVHKEVARMSREG-YEIILIGHKG 123 (298)
T ss_pred chHHHHHHHHHHhCC-CEEEEEeCCC
Confidence 345553333333336 4899999853
No 338
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=23.44 E-value=2.2e+02 Score=23.87 Aligned_cols=28 Identities=18% Similarity=0.438 Sum_probs=15.7
Q ss_pred HHHHHHHHHCCCcEEEEeCCccccHHHHH
Q 025042 161 DELVKKLKANNKNVYLISGGFRHMINPIA 189 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~ 189 (259)
.++++...++|.+++++ |+.+..++..+
T Consensus 95 ~~ll~~~~~~~~~v~ll-G~~~~v~~~a~ 122 (243)
T PRK03692 95 EALMARAGKEGTPVFLV-GGKPEVLAQTE 122 (243)
T ss_pred HHHHHHHHhcCCeEEEE-CCCHHHHHHHH
Confidence 34455555667777777 55555444433
No 339
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=23.34 E-value=2.5e+02 Score=19.13 Aligned_cols=38 Identities=13% Similarity=0.002 Sum_probs=26.5
Q ss_pred ccHHHHHHHHHHCC--CcEEEEeCCccccHHHHHHHcCCC
Q 025042 158 PGIDELVKKLKANN--KNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 158 p~~~e~l~~Lk~~g--~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
-...++++++++.+ .+++++|+........-+-+.|..
T Consensus 56 ~~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~ 95 (112)
T PF00072_consen 56 GDGLELLEQIRQINPSIPIIVVTDEDDSDEVQEALRAGAD 95 (112)
T ss_dssp SBHHHHHHHHHHHTTTSEEEEEESSTSHHHHHHHHHTTES
T ss_pred ccccccccccccccccccEEEecCCCCHHHHHHHHHCCCC
Confidence 46668899998755 568888976665444555578875
No 340
>TIGR00441 gmhA phosphoheptose isomerase. Involved in lipopolysaccharide biosynthesis it may have a role in virulence in Haemophilus ducreyi.
Probab=23.20 E-value=94 Score=23.83 Aligned_cols=31 Identities=10% Similarity=0.063 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~ 186 (259)
-.+++.+.++.+|++|.+++.+|+.......
T Consensus 91 ~t~~~~~~~~~a~~~g~~ii~iT~~~~s~l~ 121 (154)
T TIGR00441 91 NSKNVLKAIEAAKDKGMKTITLAGKDGGKMA 121 (154)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCchh
Confidence 4578888999999999999999986554433
No 341
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.00 E-value=3.3e+02 Score=20.38 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=28.3
Q ss_pred CccHHHHHHHHHHCCC-cEEEEeCC-ccccHHHHHHHcCCCCCcEeec
Q 025042 157 SPGIDELVKKLKANNK-NVYLISGG-FRHMINPIASVLGIPPENIFAN 202 (259)
Q Consensus 157 ~p~~~e~l~~Lk~~g~-~v~ivTg~-~~~~~~~i~~~lgi~~~~~~~~ 202 (259)
.+.++++++.|++.|. .+.++-|+ ....-...++++|++ .+|..
T Consensus 67 ~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd--~~~~~ 112 (132)
T TIGR00640 67 LTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVA--EIFGP 112 (132)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCC--EEECC
Confidence 3567888889998876 34444454 333334567789997 66643
No 342
>COG0415 PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]
Probab=22.89 E-value=1.5e+02 Score=27.62 Aligned_cols=44 Identities=16% Similarity=0.265 Sum_probs=36.4
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ 203 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~ 203 (259)
.+..++=+.|++.|+++++.+|+.......+++++++. .+|.+.
T Consensus 55 ~sL~~L~~~L~~~gi~L~v~~~~~~~~l~~~~~~~~~~--~v~~n~ 98 (461)
T COG0415 55 QSLQALQQSLAELGIPLLVREGDPEQVLPELAKQLAAT--TVFWNR 98 (461)
T ss_pred HHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhCcc--eEEeee
Confidence 35666777889999999999999999999999999976 677664
No 343
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=22.88 E-value=5e+02 Score=22.40 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=14.2
Q ss_pred CChHHHHHHHHHHcCCCeEEEEecCc
Q 025042 225 GGKAAAVQQIRKAHAYKVLAMIGDGA 250 (259)
Q Consensus 225 ~~K~~~v~~l~~~~g~~~v~~vGDg~ 250 (259)
..|.+..-+-..+.| -+++.+||.-
T Consensus 99 V~kv~~~v~~~~~~G-y~iiiiG~~~ 123 (280)
T TIGR00216 99 VTKVHNAVKKYAKEG-YHVILIGKKN 123 (280)
T ss_pred cHHHHHHHHHHHhCC-CEEEEEeCCC
Confidence 345554333333336 4899999853
No 344
>PF13604 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL_A 3E1S_A 3GP8_A.
Probab=22.70 E-value=89 Score=25.05 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=19.4
Q ss_pred HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
..+.+.+++.|.++++++..+.. +..+.+..|++
T Consensus 36 ~~~~~~~~~~g~~v~~~apT~~A-a~~L~~~~~~~ 69 (196)
T PF13604_consen 36 KALAEALEAAGKRVIGLAPTNKA-AKELREKTGIE 69 (196)
T ss_dssp HHHHHHHHHTT--EEEEESSHHH-HHHHHHHHTS-
T ss_pred HHHHHHHHhCCCeEEEECCcHHH-HHHHHHhhCcc
Confidence 34555667788888887765443 44466666764
No 345
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=21.89 E-value=1.8e+02 Score=22.71 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=15.3
Q ss_pred HHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042 163 LVKKLKANNKNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
.+.++++.|..++=+|.|.....+.+.++.|+
T Consensus 56 ~~~ef~~~~a~V~GIS~Ds~~~~~~F~~k~~L 87 (157)
T COG1225 56 LLEEFEKLGAVVLGISPDSPKSHKKFAEKHGL 87 (157)
T ss_pred HHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 33444444555544555544444444444444
No 346
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=21.58 E-value=1.9e+02 Score=22.95 Aligned_cols=37 Identities=24% Similarity=0.282 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
|.++-.+.+++.|..++=+|+|......+++.+..++
T Consensus 112 gFRDnY~k~kka~aeV~GlS~D~s~sqKaF~sKqnlP 148 (211)
T KOG0855|consen 112 GFRDNYEKFKKAGAEVIGLSGDDSASQKAFASKQNLP 148 (211)
T ss_pred cccccHHHHhhcCceEEeeccCchHHHHHhhhhccCC
Confidence 4556677889999999999999998888999888886
No 347
>cd02971 PRX_family Peroxiredoxin (PRX) family; composed of the different classes of PRXs including many proteins originally known as bacterioferritin comigratory proteins (BCP), based on their electrophoretic mobility before their function was identified. PRXs are thiol-specific antioxidant (TSA) proteins also known as TRX peroxidases and alkyl hydroperoxide reductase C22 (AhpC) proteins. They confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either TRX, glutathione, trypanothione and AhpF. They are distinct from other peroxidases in that they have no cofactors such as metals or prosthetic groups. The first step of catalysis, common to all PRXs, is the nucleophilic attack by the catalytic cysteine (also known as the peroxidatic cysteine) on the peroxide leading to cleavage of the oxygen-oxygen bond and the formation of a
Probab=21.49 E-value=1.6e+02 Score=21.48 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=16.3
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINPIASVL 192 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l 192 (259)
..++.+++++.|+.++.+|.+....++.+.++.
T Consensus 45 l~~~~~~~~~~~~~~i~is~d~~~~~~~~~~~~ 77 (140)
T cd02971 45 FRDLAEEFAKGGAEVLGVSVDSPFSHKAWAEKE 77 (140)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhcc
Confidence 334444444455555555555444444444444
No 348
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=20.99 E-value=1.2e+02 Score=25.89 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=25.3
Q ss_pred CCCCCccH-HHHHHHHHHCCCcEEEEeCCcc
Q 025042 153 PPRLSPGI-DELVKKLKANNKNVYLISGGFR 182 (259)
Q Consensus 153 ~~~~~p~~-~e~l~~Lk~~g~~v~ivTg~~~ 182 (259)
++.+.++. .++++.+++.|+.+.+.|++..
T Consensus 135 EPll~~~~l~~l~~~~k~~g~~~~i~TnG~~ 165 (295)
T TIGR02494 135 EPLLQPEFALALLQACHERGIHTAVETSGFT 165 (295)
T ss_pred chhchHHHHHHHHHHHHHcCCcEeeeCCCCC
Confidence 46678886 6999999999999999998853
No 349
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=20.67 E-value=3.6e+02 Score=21.00 Aligned_cols=27 Identities=15% Similarity=0.342 Sum_probs=15.3
Q ss_pred HHHHHHHHHHCCCcEEEEeCCccccHHH
Q 025042 160 IDELVKKLKANNKNVYLISGGFRHMINP 187 (259)
Q Consensus 160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~ 187 (259)
+.++++.+.+++.+++++ |+.++.++.
T Consensus 35 ~~~ll~~~~~~~~~v~ll-G~~~~~~~~ 61 (171)
T cd06533 35 MPALLELAAQKGLRVFLL-GAKPEVLEK 61 (171)
T ss_pred HHHHHHHHHHcCCeEEEE-CCCHHHHHH
Confidence 345566666666777766 444444444
No 350
>PLN02629 powdery mildew resistance 5
Probab=20.64 E-value=77 Score=28.69 Aligned_cols=12 Identities=25% Similarity=0.526 Sum_probs=10.6
Q ss_pred CCCeEEEEecCcc
Q 025042 239 AYKVLAMIGDGAT 251 (259)
Q Consensus 239 g~~~v~~vGDg~N 251 (259)
| ++++|||||.|
T Consensus 120 g-Krl~FVGDSL~ 131 (387)
T PLN02629 120 G-KTVMFVGDSLG 131 (387)
T ss_pred C-CeEEEeccccc
Confidence 5 79999999986
No 351
>PF07788 DUF1626: Protein of unknown function (DUF1626); InterPro: IPR012431 This is a family consisting of sequences from hypothetical proteins of unknown function expressed by certain species of archaea. One member (Q9YCN7 from SWISSPROT) is thought to be similar to tropomyosin [].
Probab=20.60 E-value=2.3e+02 Score=18.90 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=23.2
Q ss_pred HHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCC
Q 025042 162 ELVKKLKANN-KNVYLISGGFRHMINPIASVLGI 194 (259)
Q Consensus 162 e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi 194 (259)
++.++....- -+++++|.--..-+...+++||+
T Consensus 36 ~lYek~~grk~~r~ivVtp~id~~a~~~A~~LGI 69 (70)
T PF07788_consen 36 ELYEKVHGRKVDRLIVVTPYIDDRAKEMAEELGI 69 (70)
T ss_pred HHHHHHHCCCcceEEEEEeecCHHHHHHHHHhCC
Confidence 3444443333 34788998888889999999998
No 352
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=20.49 E-value=1.1e+02 Score=24.47 Aligned_cols=31 Identities=16% Similarity=0.128 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHCCCcEEEEeCCccccHH
Q 025042 156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (259)
Q Consensus 156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~ 186 (259)
-.+.+.+.++.+|++|.+++.+|+.......
T Consensus 123 ~t~~~i~~~~~ak~~g~~iI~iT~~~~s~l~ 153 (192)
T PRK00414 123 NSGNIIKAIEAARAKGMKVITLTGKDGGKMA 153 (192)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCChhH
Confidence 3578888999999999999999987554433
No 353
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=20.40 E-value=1.2e+02 Score=30.33 Aligned_cols=45 Identities=22% Similarity=0.130 Sum_probs=31.6
Q ss_pred cccCCCCCcCCCChHHHHHHHHHHc--------CCCeEEEEecCc-ccHHhhhc
Q 025042 214 GFDANEPTSRSGGKAAAVQQIRKAH--------AYKVLAMIGDGA-TDLEVSIF 258 (259)
Q Consensus 214 g~~~~~~~~~~~~K~~~v~~l~~~~--------g~~~v~~vGDg~-ND~~al~~ 258 (259)
|+...+..+.+.+|+.++++++++. +.+-++++||.. .|=.|+++
T Consensus 666 Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~ 719 (797)
T PLN03063 666 GQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTF 719 (797)
T ss_pred CCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHh
Confidence 3333344455679999999999864 225799999975 48777764
No 354
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=20.30 E-value=1e+02 Score=27.76 Aligned_cols=23 Identities=30% Similarity=0.423 Sum_probs=17.2
Q ss_pred HHHHhcc--CcCEEEEeCCCccccc
Q 025042 75 EVLQLWR--TADAVCFDVDSTVCVD 97 (259)
Q Consensus 75 ~~~e~~~--~~k~vvFD~DGTLt~~ 97 (259)
+.+.... ..++|-||=|+||+++
T Consensus 137 Qi~al~~~~~L~LvTFDgDvTLY~D 161 (408)
T PF06437_consen 137 QIMALAKNYGLKLVTFDGDVTLYED 161 (408)
T ss_pred HHHHhcccCCceEEEEcCCcccccC
Confidence 4444334 7899999999999764
No 355
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=20.14 E-value=5.3e+02 Score=21.72 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=31.9
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042 158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP 195 (259)
Q Consensus 158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~ 195 (259)
....+.++.+.+.|..+++++++-...+..++.+.|+.
T Consensus 117 ~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~gI~ 154 (261)
T cd03334 117 EYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGIT 154 (261)
T ss_pred HHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHCCCE
Confidence 35667888888899999999999999999988888883
Done!