Your job contains 1 sequence.
>025043
MAACHSLPFVLSILLLIFISPSLSFSEDAAAKSQKVKLSLYYESLCPYCANFIENQLVKV
FNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWPDVRIHFKLI
QCIEGQASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRF
VPWVTVNNQALEEAFQNFIAYVCKAYKGKFLPNACKSSQQESTPREASILPVCYKSSMFA
TERVPTSAETSMKMEPPA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025043
(258 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149730 - symbol:OSH1 "AT5G01580" species:3702... 532 3.1e-51 1
TAIR|locus:2007407 - symbol:AT1G07080 "AT1G07080" species... 525 1.7e-50 1
TAIR|locus:2123286 - symbol:AT4G12900 "AT4G12900" species... 493 4.2e-47 1
TAIR|locus:2135813 - symbol:AT4G12890 "AT4G12890" species... 471 9.1e-45 1
TAIR|locus:2135783 - symbol:AT4G12870 "AT4G12870" species... 442 1.1e-41 1
TAIR|locus:2123251 - symbol:GILT "AT4G12960" species:3702... 430 2.0e-40 1
RGD|1310758 - symbol:Ifi30 "interferon gamma inducible pr... 292 8.4e-26 1
UNIPROTKB|P13284 - symbol:IFI30 "Gamma-interferon-inducib... 290 1.4e-25 1
MGI|MGI:2137648 - symbol:Ifi30 "interferon gamma inducibl... 290 1.4e-25 1
UNIPROTKB|A6QPN6 - symbol:IFI30 "Gamma-interferon-inducib... 287 2.9e-25 1
UNIPROTKB|F1MAU3 - symbol:IFI30 "Gamma-interferon-inducib... 282 9.7e-25 1
WB|WBGene00009514 - symbol:F37H8.5 species:6239 "Caenorha... 274 6.8e-24 1
UNIPROTKB|F1PK63 - symbol:IFI30 "Uncharacterized protein"... 267 3.8e-23 1
UNIPROTKB|B3SP85 - symbol:IFI30 "Gamma-interferon-inducib... 264 7.8e-23 1
FB|FBgn0039099 - symbol:CG10157 species:7227 "Drosophila ... 227 6.5e-19 1
WB|WBGene00015336 - symbol:C02D5.2 species:6239 "Caenorha... 213 2.0e-17 1
UNIPROTKB|F1NSR8 - symbol:IFI30 "Uncharacterized protein"... 188 8.8e-15 1
WB|WBGene00012475 - symbol:Y18D10A.2 species:6239 "Caenor... 124 4.7e-06 1
>TAIR|locus:2149730 [details] [associations]
symbol:OSH1 "AT5G01580" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF03227 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL161946 HOGENOM:HOG000238423
InterPro:IPR004911 PANTHER:PTHR13234 eggNOG:NOG266247
IPI:IPI00521303 PIR:T48179 RefSeq:NP_195778.1 UniGene:At.54674
ProteinModelPortal:Q9M017 EnsemblPlants:AT5G01580.1 GeneID:831721
KEGG:ath:AT5G01580 TAIR:At5g01580 InParanoid:Q9M017 OMA:PPHRFVP
PhylomeDB:Q9M017 ProtClustDB:CLSN2916651 Genevestigator:Q9M017
Uniprot:Q9M017
Length = 233
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 106/200 (53%), Positives = 133/200 (66%)
Query: 31 AKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIIC 90
+ SQKV LSLYYE+LCP+CA FI N+L K+F T L + ++L+LVP+GNA IR PD TI+C
Sbjct: 22 SSSQKVTLSLYYEALCPFCAEFIVNRLPKIFETGLISSIDLQLVPWGNAAIR-PDGTILC 80
Query: 91 QHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQP 150
QHG+ EC LN IHACAINA+PDV HF I C E Q + E W C +G S+
Sbjct: 81 QHGEAECALNAIHACAINAYPDVMKHFGYIYCTE-QLVLENKLEK-WADCLEMVGLSRAA 138
Query: 151 IDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKF 210
+D CY +G G +L +YAEET L P HRFVPWV VNN L+E +QNF+ YVC AY
Sbjct: 139 VD-CYINGYGNQLEQRYAEETSELYPAHRFVPWVVVNNLPLQENYQNFVMYVCNAYGSNQ 197
Query: 211 LPNACK--SSQQESTPREAS 228
+P AC+ +S E+ R S
Sbjct: 198 VPEACRILNSSVETLSRSNS 217
>TAIR|locus:2007407 [details] [associations]
symbol:AT1G07080 "AT1G07080" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005773 "vacuole"
evidence=IDA] Pfam:PF03227 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005773 InterPro:IPR012336 SUPFAM:SSF52833 eggNOG:NOG315223
HOGENOM:HOG000238423 InterPro:IPR004911 PANTHER:PTHR13234
EMBL:AY049308 EMBL:AY054145 IPI:IPI00519392 RefSeq:NP_563779.1
UniGene:At.22572 ProteinModelPortal:Q93VQ6 PaxDb:Q93VQ6
PRIDE:Q93VQ6 EnsemblPlants:AT1G07080.1 GeneID:837219
KEGG:ath:AT1G07080 TAIR:At1g07080 InParanoid:Q93VQ6 OMA:KFVPWIV
PhylomeDB:Q93VQ6 ProtClustDB:CLSN2916979 Genevestigator:Q93VQ6
Uniprot:Q93VQ6
Length = 265
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 91/185 (49%), Positives = 125/185 (67%)
Query: 31 AKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIIC 90
+ S KV + LYYESLCPYC++FI N L K+F DL +IV+L L P+GN ++R + T +C
Sbjct: 34 SSSPKVSVGLYYESLCPYCSSFIVNHLAKLFEDDLISIVDLHLSPWGNTKLRSDNVTAVC 93
Query: 91 QHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQP 150
QHG EC+L+T+ ACAI+AWP V HF I C+E +E W C L + +P
Sbjct: 94 QHGAFECFLDTVEACAIDAWPKVSDHFPFIYCVE--KLVTEHKYDKWETCYEKLNLNSKP 151
Query: 151 IDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKF 210
+ +C SG G +L L YA ET++L+PPH++VPWV V+ Q L E ++NFI+Y+CKAYKG
Sbjct: 152 VADCLSSGHGNELALHYAAETNALQPPHKYVPWVVVDGQPLYEDYENFISYICKAYKGNK 211
Query: 211 LPNAC 215
+P AC
Sbjct: 212 VPGAC 216
>TAIR|locus:2123286 [details] [associations]
symbol:AT4G12900 "AT4G12900" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] Pfam:PF03227
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161535 EMBL:AL079349
eggNOG:NOG315223 HOGENOM:HOG000238423 InterPro:IPR004911
PANTHER:PTHR13234 ProtClustDB:CLSN2685785 IPI:IPI00527876
PIR:H85138 RefSeq:NP_193026.1 UniGene:At.33437
ProteinModelPortal:Q9SV79 PaxDb:Q9SV79 PRIDE:Q9SV79
EnsemblPlants:AT4G12900.1 GeneID:826902 KEGG:ath:AT4G12900
TAIR:At4g12900 InParanoid:Q9SV79 OMA:LEIAIEC PhylomeDB:Q9SV79
Genevestigator:Q9SV79 Uniprot:Q9SV79
Length = 231
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 93/190 (48%), Positives = 124/190 (65%)
Query: 30 AAKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTII 89
A +S KVKL+LYYESLCP C NFI + L K+FNTDL TI +L+L+P+GNA + D T+
Sbjct: 31 AGESDKVKLNLYYESLCPSCQNFIVHHLGKIFNTDLHTITDLKLIPFGNAHV-SDDLTVT 89
Query: 90 CQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQ 149
CQHG+ EC LN + ACAI WP+ R+H+K I+C+E +A W C G ++
Sbjct: 90 CQHGEEECKLNALEACAIRTWPNQRLHYKFIRCVETNTNA-------WESCVKKYG-GEK 141
Query: 150 PIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGK 209
I++CY +L L YA +T SLKP H++VPW+T+N + L E +F+ VCKAYKGK
Sbjct: 142 AINDCYNGDLSKELILGYANQTLSLKPEHKYVPWMTLNGEPLYENIGDFVDLVCKAYKGK 201
Query: 210 F-LPNACKSS 218
LP C SS
Sbjct: 202 AALPKLCYSS 211
>TAIR|locus:2135813 [details] [associations]
symbol:AT4G12890 "AT4G12890" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF03227 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:3.40.30.10 InterPro:IPR012336
eggNOG:NOG315223 HOGENOM:HOG000238423 InterPro:IPR004911
PANTHER:PTHR13234 UniGene:At.20544 UniGene:At.43237 EMBL:BT026411
IPI:IPI00543029 RefSeq:NP_567395.1 ProteinModelPortal:Q0V809
PaxDb:Q0V809 PRIDE:Q0V809 EnsemblPlants:AT4G12890.1 GeneID:826901
KEGG:ath:AT4G12890 TAIR:At4g12890 InParanoid:Q0V809 OMA:CHASEAR
PhylomeDB:Q0V809 ProtClustDB:CLSN2685785 Genevestigator:Q0V809
Uniprot:Q0V809
Length = 232
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 90/189 (47%), Positives = 119/189 (62%)
Query: 30 AAKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTII 89
A S KVK++LYYESLCPYC NFI + L K+F++DL I +L+LVP+GNA I + TI
Sbjct: 33 AENSNKVKINLYYESLCPYCQNFIVDDLGKIFDSDLLKITDLKLVPFGNAHISN-NLTIT 91
Query: 90 CQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQ 149
CQHG+ EC LN + AC I PD ++ +K I+C+E + W C G ++
Sbjct: 92 CQHGEEECKLNALEACGIRTLPDPKLQYKFIRCVEKDTNE-------WESCVKKSG-REK 143
Query: 150 PIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGK 209
I++CY KL L YA+ T SLKP H +VPWVT+N + L + + N +A VCKAYKGK
Sbjct: 144 AINDCYNGDLSQKLILGYAKLTSSLKPKHEYVPWVTLNGKPLYDNYHNLVAQVCKAYKGK 203
Query: 210 FLPNACKSS 218
LP C SS
Sbjct: 204 DLPKLCSSS 212
>TAIR|locus:2135783 [details] [associations]
symbol:AT4G12870 "AT4G12870" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] Pfam:PF03227
EMBL:CP002687 GenomeReviews:CT486007_GR eggNOG:NOG315223
HOGENOM:HOG000238423 InterPro:IPR004911 PANTHER:PTHR13234
ProtClustDB:CLSN2685785 EMBL:AY072432 EMBL:AY128863 IPI:IPI00537852
RefSeq:NP_193023.2 UniGene:At.3102 ProteinModelPortal:Q8VY56
PaxDb:Q8VY56 PRIDE:Q8VY56 EnsemblPlants:AT4G12870.1 GeneID:826899
KEGG:ath:AT4G12870 TAIR:At4g12870 InParanoid:Q8VY56 OMA:EACVINT
PhylomeDB:Q8VY56 Genevestigator:Q8VY56 Uniprot:Q8VY56
Length = 229
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 86/188 (45%), Positives = 122/188 (64%)
Query: 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQ 91
+S KV+L+LYYESLCP C +FI ++LVKVF++DL TI +++LVP+G A++ + T+ICQ
Sbjct: 29 ESDKVELNLYYESLCPGCQSFIVDELVKVFDSDLDTITDVKLVPFGYAKVSN-NLTVICQ 87
Query: 92 HGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQPI 151
HG+ EC LN + AC IN P+ + +K I+C+E E C G +++ I
Sbjct: 88 HGEEECKLNALEACVINTLPNPKSQYKFIRCVENNTDNWES------SCLKGYG-NEKAI 140
Query: 152 DNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKF- 210
++CY S KL L YA++T SLKP H FVPWVT+N++ L + + VCKAYKGK
Sbjct: 141 NDCYNSDLSKKLILGYAKQTSSLKPKHEFVPWVTINSKPLYTKLDDLVGQVCKAYKGKTP 200
Query: 211 LPNACKSS 218
LP C S+
Sbjct: 201 LPIDCSSA 208
>TAIR|locus:2123251 [details] [associations]
symbol:GILT "AT4G12960" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF03227 EMBL:CP002687
UniGene:At.45 InterPro:IPR004911 PANTHER:PTHR13234 IPI:IPI00939008
RefSeq:NP_001154228.1 UniGene:At.20544 UniGene:At.43237
ProteinModelPortal:F4JRI7 PRIDE:F4JRI7 EnsemblPlants:AT4G12960.2
GeneID:826908 KEGG:ath:AT4G12960 OMA:YDLYTIT Uniprot:F4JRI7
Length = 243
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 91/220 (41%), Positives = 126/220 (57%)
Query: 30 AAKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTII 89
A KS KVKL+LYYESLCP C FI + L K+F+ DL TI +L+L P+GNA++ + T+
Sbjct: 26 AGKSGKVKLNLYYESLCPGCQEFIVDDLGKIFDYDLYTITDLKLFPFGNAEL-SDNLTVT 84
Query: 90 CQHGQNECYLNTIHACAINAWPDV----------RIHFKLIQCIEGQASASEQPEAAWRK 139
CQHG+ EC LN + ACA+ WPD + + I+C+E W
Sbjct: 85 CQHGEEECKLNALEACALRTWPDQFDKCDGYGTQKSQYSFIRCVESDTKG-------WES 137
Query: 140 CCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQN-- 197
C + G ++ I++CY KL L YA +T +LKPPH +VPWVT+N + L+++ Q+
Sbjct: 138 CVKNSG-REKAINDCYNGDLSRKLILGYATKTKNLKPPHEYVPWVTLNGKPLDDSVQSTD 196
Query: 198 -FIAYVCKAYKGKF-LPNACKSSQQES-TPREASILPVCY 234
+A +C AYKGK LP C SS S +P L V Y
Sbjct: 197 DLVAQICNAYKGKTTLPKVCNSSASMSKSPERKWKLQVSY 236
>RGD|1310758 [details] [associations]
symbol:Ifi30 "interferon gamma inducible protein 30"
species:10116 "Rattus norvegicus" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005764 "lysosome" evidence=ISO;ISS]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0016667
"oxidoreductase activity, acting on a sulfur group of donors"
evidence=ISO;ISS] [GO:0019886 "antigen processing and presentation
of exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0030054 "cell junction" evidence=IEA;ISO] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=ISO;ISS] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0048147 "negative
regulation of fibroblast proliferation" evidence=IEA;ISO]
[GO:0050821 "protein stabilization" evidence=IEA;ISO] RGD:1310758
Pfam:PF03227 GO:GO:0005886 GO:GO:0005576 GO:GO:0050821
GO:GO:0019886 GO:GO:0030054 GO:GO:0005764 GO:GO:0048147
GO:GO:0042590 CTD:10437 eggNOG:NOG315223 HOGENOM:HOG000238423
HOVERGEN:HBG005837 KO:K08059 OrthoDB:EOG4HHP3H GO:GO:0016667
InterPro:IPR004911 PANTHER:PTHR13234 OMA:VNVSLYY
GeneTree:ENSGT00390000010450 EMBL:CH474031 EMBL:BC099774
EMBL:BC088256 IPI:IPI00196145 RefSeq:NP_001025197.1 UniGene:Rn.3370
STRING:Q499T2 PhosphoSite:Q499T2 Ensembl:ENSRNOT00000026225
GeneID:290644 KEGG:rno:290644 InParanoid:Q5I0J7 NextBio:631392
Genevestigator:Q499T2 Uniprot:Q499T2
Length = 248
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 73/202 (36%), Positives = 104/202 (51%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IICQHG 93
V +SLYYESLC C F+ L + + I+N+ LVPYGNAQ R T CQHG
Sbjct: 59 VNVSLYYESLCGACRYFLVRNLFPTWLMVME-IMNITLVPYGNAQERNVSGTWEFTCQHG 117
Query: 94 QNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQPIDN 153
+ EC LN + AC ++ + F I C+E ++ + ++ S + I
Sbjct: 118 ELECKLNKVEACLLDKL-EKEAAFLTIVCMEEMEDMEKKLGPCLQLYVPEV--SPESIME 174
Query: 154 CYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKFLPN 213
C GT+L + A+ TD+L+PPH +VPWV VN + L + Q ++ VC+ Y+G P+
Sbjct: 175 CATGKRGTELMHENAQLTDALQPPHEYVPWVLVNEKPLTDPSQ-LLSSVCELYQGTEKPD 233
Query: 214 ACKSSQQESTPREASILPVCYK 235
C S PRE VCYK
Sbjct: 234 ICSS--MADAPRE-----VCYK 248
>UNIPROTKB|P13284 [details] [associations]
symbol:IFI30 "Gamma-interferon-inducible lysosomal thiol
reductase" species:9606 "Homo sapiens" [GO:0048147 "negative
regulation of fibroblast proliferation" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0016667 "oxidoreductase activity, acting
on a sulfur group of donors" evidence=IMP] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=ISS] [GO:0005764 "lysosome" evidence=IDA]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0060333
"interferon-gamma-mediated signaling pathway" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] Pfam:PF03227 GO:GO:0005886
Reactome:REACT_6900 GO:GO:0005576 GO:GO:0050821 GO:GO:0060333
GO:GO:0019886 GO:GO:0030054 GO:GO:0043202 GO:GO:0048147
EMBL:CH471106 GO:GO:0042590 CTD:10437 eggNOG:NOG315223
HOGENOM:HOG000238423 HOVERGEN:HBG005837 KO:K08059 OrthoDB:EOG4HHP3H
GO:GO:0016667 InterPro:IPR004911 PANTHER:PTHR13234 EMBL:J03909
EMBL:AF097362 EMBL:AB049659 EMBL:AC007192 EMBL:AC093080
EMBL:AC068499 EMBL:BC021136 EMBL:BC031020 IPI:IPI00007853
PIR:A43708 RefSeq:NP_006323.2 UniGene:Hs.14623
ProteinModelPortal:P13284 IntAct:P13284 STRING:P13284
PhosphoSite:P13284 DMDM:12643406 PaxDb:P13284 PRIDE:P13284
DNASU:10437 Ensembl:ENST00000407280 GeneID:10437 KEGG:hsa:10437
UCSC:uc002nic.1 GeneCards:GC19P018284 HGNC:HGNC:5398 HPA:HPA026650
MIM:604664 neXtProt:NX_P13284 PharmGKB:PA29644 InParanoid:P13284
OMA:VNVSLYY GenomeRNAi:10437 NextBio:39558 Bgee:P13284
CleanEx:HS_IFI30 Genevestigator:P13284 Uniprot:P13284
Length = 250
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 73/204 (35%), Positives = 105/204 (51%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IICQHG 93
V ++LYYE+LC C F+ +L + + I+N+ LVPYGNAQ + CQHG
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTWLLVME-ILNVTLVPYGNAQEQNVSGRWEFKCQHG 120
Query: 94 QNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDL--GFSQQPI 151
+ EC N + AC ++ D+ + F I C+E E E + C G S I
Sbjct: 121 EEECKFNKVEACVLDEL-DMELAFLTIVCME----EFEDMERSLPLCLQLYAPGLSPDTI 175
Query: 152 DNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKFL 211
C G +L A+ TD+L+PPH +VPWVTVN + LE+ Q + VC+ Y+GK
Sbjct: 176 MECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQ-LLTLVCQLYQGK-K 233
Query: 212 PNACKSSQQESTPREASILPVCYK 235
P+ C SS +S+ VC+K
Sbjct: 234 PDVCPSST-------SSLRSVCFK 250
>MGI|MGI:2137648 [details] [associations]
symbol:Ifi30 "interferon gamma inducible protein 30"
species:10090 "Mus musculus" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005764 "lysosome" evidence=ISO;IDA] [GO:0015036
"disulfide oxidoreductase activity" evidence=TAS] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016667 "oxidoreductase
activity, acting on a sulfur group of donors" evidence=ISO]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IMP] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=IMP] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IMP] [GO:0050821 "protein
stabilization" evidence=IMP] [GO:0055114 "oxidation-reduction
process" evidence=ISO;TAS] MGI:MGI:2137648 Pfam:PF03227
GO:GO:0005576 GO:GO:0050821 GO:GO:0019886 GO:GO:0005764
GO:GO:0048147 GO:GO:0015036 EMBL:CH466569 GO:GO:0042590 CTD:10437
eggNOG:NOG315223 HOGENOM:HOG000238423 HOVERGEN:HBG005837 KO:K08059
OrthoDB:EOG4HHP3H InterPro:IPR004911 PANTHER:PTHR13234 OMA:VNVSLYY
EMBL:AF309649 EMBL:AF309650 EMBL:AF290973 EMBL:AK156914
EMBL:AC162446 EMBL:BC054852 IPI:IPI00990499 RefSeq:NP_075552.2
UniGene:Mm.30241 ProteinModelPortal:Q9ESY9 STRING:Q9ESY9
PhosphoSite:Q9ESY9 PaxDb:Q9ESY9 PRIDE:Q9ESY9
Ensembl:ENSMUST00000034299 GeneID:65972 KEGG:mmu:65972
GeneTree:ENSGT00390000010450 InParanoid:Q9EP56 ChiTaRS:IFI30
NextBio:320430 Genevestigator:Q9ESY9 Uniprot:Q9ESY9
Length = 248
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 74/205 (36%), Positives = 109/205 (53%)
Query: 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IIC 90
S V++SLYYESLC C F+ L + + I+N+ LVPYGNAQ R T C
Sbjct: 56 SPPVRVSLYYESLCGACRYFLVRDLFPTWLMVME-IMNITLVPYGNAQERNVSGTWEFTC 114
Query: 91 QHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQP 150
QHG+ EC LN + AC ++ + F I C+E ++ + ++ S +
Sbjct: 115 QHGELECRLNMVEACLLDKL-EKEAAFLTIVCMEEMDDMEKKLGPCLQVYAPEV--SPES 171
Query: 151 IDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKF 210
I C GT+L + A+ TD+L PPH +VPWV VN + L++ + ++ VC+ Y+G
Sbjct: 172 IMECATGKRGTQLMHENAQLTDALHPPHEYVPWVLVNEKPLKDPSE-LLSIVCQLYQGTE 230
Query: 211 LPNACKSSQQESTPREASILPVCYK 235
P+ C SS +S PR+ VCYK
Sbjct: 231 KPDIC-SSIADS-PRK-----VCYK 248
>UNIPROTKB|A6QPN6 [details] [associations]
symbol:IFI30 "Gamma-interferon-inducible lysosomal thiol
reductase" species:9913 "Bos taurus" [GO:0005764 "lysosome"
evidence=ISS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=ISS]
[GO:0016667 "oxidoreductase activity, acting on a sulfur group of
donors" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] Pfam:PF03227 GO:GO:0005576 GO:GO:0005764
GO:GO:0042590 EMBL:BC149406 IPI:IPI00733616 RefSeq:NP_001094721.1
UniGene:Bt.1548 STRING:A6QPN6 GeneID:615930 KEGG:bta:615930
CTD:10437 eggNOG:NOG315223 HOGENOM:HOG000238423 HOVERGEN:HBG005837
InParanoid:A6QPN6 KO:K08059 OrthoDB:EOG4HHP3H NextBio:20899868
GO:GO:0016667 InterPro:IPR004911 PANTHER:PTHR13234 Uniprot:A6QPN6
Length = 244
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/191 (35%), Positives = 103/191 (53%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IICQHG 93
V +SLYYE+LCP C F+ +L + L I+N+ LVPYGNAQ R CQHG
Sbjct: 56 VNVSLYYEALCPGCREFLIRELFPTWLMVLE-ILNVTLVPYGNAQERNVSGKWEFTCQHG 114
Query: 94 QNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLG--FSQQPI 151
+ EC LN + AC ++ + +I F I C+E + E + C S I
Sbjct: 115 ERECLLNKVEACLLDQL-EQKIAFLTIVCLEEM----DDMEQNLKPCLQIYAPKVSADSI 169
Query: 152 DNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKFL 211
C G +L A+ TD+L+PPH++VPWV VN + +++A ++ + VC+ Y+G+
Sbjct: 170 MECATGNRGMQLLHINAQLTDALRPPHKYVPWVVVNGEHMKDA-EHLLHLVCRLYQGQ-K 227
Query: 212 PNACKSSQQES 222
P+ C+ + + S
Sbjct: 228 PDVCQLTAELS 238
>UNIPROTKB|F1MAU3 [details] [associations]
symbol:IFI30 "Gamma-interferon-inducible lysosomal thiol
reductase" species:9913 "Bos taurus" [GO:0050821 "protein
stabilization" evidence=IEA] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IEA] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0016667
"oxidoreductase activity, acting on a sulfur group of donors"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] Pfam:PF03227 GO:GO:0005886
GO:GO:0050821 GO:GO:0019886 GO:GO:0030054 GO:GO:0005764
GO:GO:0048147 IPI:IPI00733616 UniGene:Bt.1548 GO:GO:0016667
InterPro:IPR004911 PANTHER:PTHR13234 OMA:VNVSLYY
GeneTree:ENSGT00390000010450 EMBL:DAAA02019063 EMBL:DAAA02019062
PRIDE:F1MAU3 Ensembl:ENSBTAT00000047907 ArrayExpress:F1MAU3
Uniprot:F1MAU3
Length = 244
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 66/191 (34%), Positives = 102/191 (53%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IICQHG 93
V +SLYYE+LCP C F+ +L + L I+N+ LVPYGNAQ R CQHG
Sbjct: 56 VNVSLYYEALCPGCREFLIRELFPTWLMVLE-ILNVTLVPYGNAQERNVSGKWEFTCQHG 114
Query: 94 QNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLG--FSQQPI 151
+ EC LN + AC ++ + +I F I C+E + E + C S I
Sbjct: 115 ERECLLNKVEACLLDQL-EQKIAFLTIVCLEEM----DDMEQNLKPCLQIYAPKVSADSI 169
Query: 152 DNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKFL 211
C G +L A+ TD+L+PPH++VPWV VN + +++ ++ + VC+ Y+G+
Sbjct: 170 MECATGNRGMQLLHINAQLTDALRPPHKYVPWVVVNGEHMKDE-EHLLHLVCRLYQGQ-K 227
Query: 212 PNACKSSQQES 222
P+ C+ + + S
Sbjct: 228 PDVCQLTAELS 238
>WB|WBGene00009514 [details] [associations]
symbol:F37H8.5 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF03227 GO:GO:0005576
eggNOG:NOG315223 KO:K08059 InterPro:IPR004911 PANTHER:PTHR13234
GeneTree:ENSGT00390000010450 EMBL:Z81534 PIR:T21922
RefSeq:NP_496397.1 ProteinModelPortal:O17861 STRING:O17861
PaxDb:O17861 EnsemblMetazoa:F37H8.5 GeneID:3564874
KEGG:cel:CELE_F37H8.5 UCSC:F37H8.5 CTD:3564874 WormBase:F37H8.5
HOGENOM:HOG000199531 InParanoid:O17861 OMA:DLVPYGN NextBio:954305
Uniprot:O17861
Length = 277
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 67/198 (33%), Positives = 105/198 (53%)
Query: 29 AAAKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTI 88
AA +QK+ +++ E+LCP C NF+ QL + + + VN+ LVP+GNA++ D TI
Sbjct: 69 AATHNQKINITVLIEALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNAKVL-EDGTI 127
Query: 89 ICQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDL---G 145
CQHG+ EC +N C I++ D + + CIE + A ++C L G
Sbjct: 128 KCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGG 186
Query: 146 FSQQPIDNCYQSGEGTKLTLKYAEETDSLKPP-HRFVPWVTVNNQALE--EAFQNFI-AY 201
Q+ +C S G L K A T ++ P H+FVPWV +N +L + FQN +
Sbjct: 187 DIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSLTSFQGFQNQLPTL 246
Query: 202 VCKAYKG-KFLPNACKSS 218
+C+ Y G K +P C+++
Sbjct: 247 LCEWYSGDKAIPY-CEAA 263
>UNIPROTKB|F1PK63 [details] [associations]
symbol:IFI30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048147 "negative regulation of fibroblast proliferation"
evidence=IEA] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0016667 "oxidoreductase activity,
acting on a sulfur group of donors" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] Pfam:PF03227 GO:GO:0005886 GO:GO:0050821
GO:GO:0019886 GO:GO:0030054 GO:GO:0005764 GO:GO:0048147 KO:K08059
GO:GO:0016667 InterPro:IPR004911 PANTHER:PTHR13234 OMA:VNVSLYY
GeneTree:ENSGT00390000010450 EMBL:AAEX03012283 RefSeq:XP_533874.3
Ensembl:ENSCAFT00000023729 GeneID:476669 KEGG:cfa:476669
Uniprot:F1PK63
Length = 251
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 64/183 (34%), Positives = 95/183 (51%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKT--IICQHG 93
V +S+YYE+LCP C F+ +L + L I+N+ LVPYGNA + CQHG
Sbjct: 63 VNVSVYYEALCPGCRAFLVRELFPTWLMVLE-ILNVTLVPYGNAHEQNVSGRWEFTCQHG 121
Query: 94 QNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQPIDN 153
+ EC LN + AC + D + +I CIE E + + S I
Sbjct: 122 EQECKLNKVEACLWDKL-DKNLAILIIVCIEEMDDMEENLKPCMEIYAPTM--SPDTIME 178
Query: 154 CYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKFLPN 213
C G +L A+ TD+L+PPH +VPWV VN + L++ Q ++ VC+ Y+G+ P+
Sbjct: 179 CAVGDRGMQLLHINAQLTDALQPPHEYVPWVVVNGKPLKDLSQ-LLSLVCQLYQGE-KPD 236
Query: 214 ACK 216
AC+
Sbjct: 237 ACQ 239
>UNIPROTKB|B3SP85 [details] [associations]
symbol:IFI30 "Gamma-interferon-inducible-lysosomal thiol
reductase" species:9823 "Sus scrofa" [GO:0005764 "lysosome"
evidence=ISS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=ISS]
[GO:0016667 "oxidoreductase activity, acting on a sulfur group of
donors" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048147 "negative regulation of fibroblast proliferation"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF03227 GO:GO:0005886 GO:GO:0005576
GO:GO:0050821 GO:GO:0019886 GO:GO:0030054 GO:GO:0005764
GO:GO:0048147 GO:GO:0042590 CTD:10437 eggNOG:NOG315223
HOGENOM:HOG000238423 HOVERGEN:HBG005837 KO:K08059 OrthoDB:EOG4HHP3H
GO:GO:0016667 InterPro:IPR004911 PANTHER:PTHR13234 OMA:VNVSLYY
GeneTree:ENSGT00390000010450 EMBL:EF644197 EMBL:EU154970
RefSeq:NP_001124518.1 UniGene:Ssc.53751 ProteinModelPortal:B3SP85
STRING:B3SP85 Ensembl:ENSSSCT00000015187 GeneID:100174943
KEGG:ssc:100174943 Uniprot:B3SP85
Length = 246
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 70/193 (36%), Positives = 99/193 (51%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLST--IVNLRLVPYGNAQIRGPDKT--IICQ 91
V ++LYYESLC C F+ +L F T L I+N+ LVPYGNAQ R CQ
Sbjct: 58 VNVNLYYESLCNGCRYFLVREL---FPTWLMVWEILNVTLVPYGNAQERNVSGRWEFTCQ 114
Query: 92 HGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQPI 151
HG+ EC +N + AC ++ + + F I CIE + E + + S I
Sbjct: 115 HGEQECKMNKVEACLLDKL-EKNMAFLTIVCIEELDDMEKNLEPCLQIYAPKV--SPDSI 171
Query: 152 DNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKFL 211
C G +L A+ TD+LKPPH +VPWV VN + + E Q + VC+ Y+G+
Sbjct: 172 MECAMGDRGMQLLHINAQLTDALKPPHEYVPWVVVNGKPMTEKDQ-LLRLVCQLYEGE-K 229
Query: 212 PNACK---SSQQE 221
P+ C+ SS +E
Sbjct: 230 PDVCQILASSHKE 242
>FB|FBgn0039099 [details] [associations]
symbol:CG10157 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0016667
"oxidoreductase activity, acting on a sulfur group of donors"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] Pfam:PF03227 EMBL:AE014297 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 InterPro:IPR004911
PANTHER:PTHR13234 GeneTree:ENSGT00390000010450 EMBL:AY095188
RefSeq:NP_651166.1 UniGene:Dm.11133 IntAct:Q9VCK1 MINT:MINT-930903
EnsemblMetazoa:FBtr0084435 GeneID:42788 KEGG:dme:Dmel_CG10157
UCSC:CG10157-RA FlyBase:FBgn0039099 eggNOG:NOG266247
InParanoid:Q9VCK1 OMA:IACMMRG OrthoDB:EOG4QNKCF GenomeRNAi:42788
NextBio:830563 Uniprot:Q9VCK1
Length = 207
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 61/185 (32%), Positives = 89/185 (48%)
Query: 32 KSQKVKLSLYYESLCPYCANFIENQL-VKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIIC 90
++ ++ ++LYYE+LCPYC F+ QL + D +L LVPYGNA+ D + C
Sbjct: 26 QADRLAITLYYEALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTND-DGNVEC 84
Query: 91 QHGQNECYLNTIHACAINAWPDVRIHFKLIQCI-EGQASASEQPEAAWRKCCNDLGFSQQ 149
QHG EC LN HAC + D+ KLI C+ G+ + E KC +
Sbjct: 85 QHGVMECELNAWHACILEHH-DIAQSLKLIACMMRGKKNRLE-------KCADHYQIDVG 136
Query: 150 PIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQN----FIAYVCKA 205
+ NC ++ + + KY +ET K + VP V ++N + N F A C
Sbjct: 137 DVKNCKKTRQVNDILRKYGKET--AKVSFQGVPAVALDNVYNADLSANLTDHFDAIFCAK 194
Query: 206 YKGKF 210
YK KF
Sbjct: 195 YKEKF 199
>WB|WBGene00015336 [details] [associations]
symbol:C02D5.2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF03227
GO:GO:0016021 eggNOG:NOG315223 InterPro:IPR004911 PANTHER:PTHR13234
GeneTree:ENSGT00390000010450 EMBL:FO080279 PIR:S44744
RefSeq:NP_001040839.1 RefSeq:NP_001040840.1 UniGene:Cel.10913
ProteinModelPortal:P34276 PaxDb:P34276 EnsemblMetazoa:C02D5.2a
GeneID:176203 KEGG:cel:CELE_C02D5.2 UCSC:C02D5.2a CTD:176203
WormBase:C02D5.2a WormBase:C02D5.2b HOGENOM:HOG000021389
InParanoid:P34276 OMA:GKARCTE NextBio:891564 Uniprot:P34276
Length = 323
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 53/186 (28%), Positives = 90/186 (48%)
Query: 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTI--VNLRLVPYGNAQI--RGPDKTIICQ 91
VKL +Y E+ CP + F QL K ++ L + + L ++P+G A+ +G D CQ
Sbjct: 139 VKLDVYMEAQCPDTSRFFRQQLKKAWDI-LGRLNRIELNVIPFGKARCTEKGNDFECQCQ 197
Query: 92 HGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQ-QP 150
HG EC +N + C I+ + + + C++G+ S E KC + S+ +
Sbjct: 198 HGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQGKYSLDEA-----MKCVTENYPSEYER 252
Query: 151 IDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCKAYKGKF 210
+ C G +L ++T SL P F+PW+ +N +A + VC+A +
Sbjct: 253 MRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSDALYDLTQNVCEAMQP-- 310
Query: 211 LPNACK 216
+P+ACK
Sbjct: 311 MPSACK 316
>UNIPROTKB|F1NSR8 [details] [associations]
symbol:IFI30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016667 "oxidoreductase activity,
acting on a sulfur group of donors" evidence=IEA] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=IEA]
[GO:0048147 "negative regulation of fibroblast proliferation"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
Pfam:PF03227 GO:GO:0005886 GO:GO:0050821 GO:GO:0019886
GO:GO:0030054 GO:GO:0005764 GO:GO:0048147 GO:GO:0016667
InterPro:IPR004911 PANTHER:PTHR13234 GeneTree:ENSGT00390000010450
EMBL:AADN02061971 IPI:IPI00575807 Ensembl:ENSGALT00000005355
OMA:QACLMHE Uniprot:F1NSR8
Length = 144
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 42/134 (31%), Positives = 69/134 (51%)
Query: 90 CQHGQNECYLNTIHACAINAWPDVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQ 149
CQHG EC N + AC ++ + +F +I C+E +SA++ + L +
Sbjct: 4 CQHGSEECLGNMLQACLMHEAQNFTTYFPVIFCMESGSSATKNAAQCLQLYAPQLDAGR- 62
Query: 150 PIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEE----AFQNFIAYVCKA 205
I C Q G L + A+ TD+L PPH++VPWV +N + +E A + + VC+
Sbjct: 63 -ITACAQGELGAALMHRNAQLTDALDPPHQYVPWVVINGKHTDELQAQAQSSLLRLVCQL 121
Query: 206 YKGKFLPNACKSSQ 219
Y+G P AC+ ++
Sbjct: 122 YQGD-KPEACEDTE 134
>WB|WBGene00012475 [details] [associations]
symbol:Y18D10A.2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF03227
EMBL:AL034393 InterPro:IPR004911 PANTHER:PTHR13234
GeneTree:ENSGT00390000010450 RefSeq:NP_493240.2
ProteinModelPortal:Q9XW24 EnsemblMetazoa:Y18D10A.2 GeneID:189471
KEGG:cel:CELE_Y18D10A.2 UCSC:Y18D10A.2 CTD:189471
WormBase:Y18D10A.2 eggNOG:NOG313925 OMA:LNDENSY Uniprot:Q9XW24
Length = 212
Score = 124 (48.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 44 SLCPYCANFIENQLVKVFNT---DLSTIVNL--RLVPYGNAQIRGPDKTII-CQHGQNEC 97
S CP + FI NQLV + +LS + L VP G Q+ G K + C HG EC
Sbjct: 45 SRCPDTSKFIHNQLVPFYQNYKGNLSDGLKLDFHAVPTGGHQVDG--KYVNRCLHGALEC 102
Query: 98 YLNTIHACAINAWPDVRIHFKLIQ-CIEGQASASEQPEAAWRKCCNDLGFSQQPIDNCYQ 156
LN + C+ ++ + + CI+G+ + S A KC D + + NC +
Sbjct: 103 ALNKLQMCSKK---HIKQDWLVTAGCIQGKTAYS-----AGLKCLPDTE-EGKIVQNCAE 153
Query: 157 SGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALEEAFQNFIAYVCK 204
S EG L ++ P ++PW+ VN + A +C+
Sbjct: 154 SEEGEYLLNDENSYRYNVAPHSAWLPWIQVNGERNRNAEFKLKDVICQ 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 258 237 0.00090 113 3 11 22 0.42 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 613 (65 KB)
Total size of DFA: 205 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.92u 0.11s 20.03t Elapsed: 00:00:01
Total cpu time: 19.92u 0.11s 20.03t Elapsed: 00:00:01
Start: Sat May 11 13:15:01 2013 End: Sat May 11 13:15:02 2013