Query 025043
Match_columns 258
No_of_seqs 132 out of 394
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:02:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025043.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025043hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gha_A Disulfide bond formatio 98.5 1.8E-06 6.1E-11 73.7 12.7 159 32-208 27-193 (202)
2 3bci_A Disulfide bond protein 98.4 4.1E-06 1.4E-10 69.4 13.3 157 32-206 9-177 (186)
3 3gyk_A 27KDA outer membrane pr 98.4 4.1E-06 1.4E-10 68.3 12.5 147 32-202 20-168 (175)
4 2rem_A Disulfide oxidoreductas 98.2 8.4E-06 2.9E-10 67.4 10.8 136 33-191 24-166 (193)
5 4dvc_A Thiol:disulfide interch 98.2 1.3E-05 4.4E-10 65.2 11.5 154 32-202 19-177 (184)
6 3hd5_A Thiol:disulfide interch 98.2 4.5E-05 1.5E-09 63.4 13.7 136 32-191 23-162 (195)
7 3h93_A Thiol:disulfide interch 98.1 8.6E-06 2.9E-10 67.6 9.2 137 32-191 23-163 (192)
8 3f4s_A Alpha-DSBA1, putative u 98.1 1.2E-05 4.1E-10 70.0 10.5 154 32-206 37-210 (226)
9 3hz8_A Thiol:disulfide interch 98.0 9.7E-05 3.3E-09 62.0 12.5 136 33-191 23-165 (193)
10 3gmf_A Protein-disulfide isome 98.0 2.3E-05 7.9E-10 67.3 8.6 153 32-206 13-196 (205)
11 2znm_A Thiol:disulfide interch 98.0 3.1E-05 1.1E-09 64.1 9.1 136 32-190 20-160 (195)
12 3l9v_A Putative thiol-disulfid 97.8 0.00014 4.9E-09 60.8 10.3 139 35-191 15-156 (189)
13 3l9s_A Thiol:disulfide interch 97.6 0.00035 1.2E-08 58.8 10.2 140 33-191 20-162 (191)
14 2in3_A Hypothetical protein; D 97.6 0.00033 1.1E-08 58.7 10.0 151 34-190 6-188 (216)
15 3gn3_A Putative protein-disulf 97.6 0.00064 2.2E-08 57.0 10.9 138 33-191 13-165 (182)
16 2imf_A HCCA isomerase, 2-hydro 97.5 0.00061 2.1E-08 57.2 10.3 160 36-205 1-194 (203)
17 1z6m_A Conserved hypothetical 97.3 0.00076 2.6E-08 54.7 8.3 141 32-201 25-172 (175)
18 3c7m_A Thiol:disulfide interch 97.2 0.00045 1.5E-08 56.7 5.9 54 135-190 115-172 (195)
19 3kzq_A Putative uncharacterize 97.2 0.0026 8.8E-08 53.5 10.1 147 36-187 3-176 (208)
20 3gl5_A Putative DSBA oxidoredu 97.0 0.0062 2.1E-07 53.0 11.0 168 35-208 2-214 (239)
21 1r4w_A Glutathione S-transfera 96.3 0.0098 3.4E-07 50.7 7.4 75 133-209 134-217 (226)
22 3feu_A Putative lipoprotein; a 96.0 0.013 4.4E-07 48.7 6.6 135 34-190 22-162 (185)
23 3rpp_A Glutathione S-transfera 95.8 0.088 3E-06 45.3 11.3 169 34-209 4-217 (234)
24 3fz5_A Possible 2-hydroxychrom 95.2 0.029 1E-06 47.0 5.8 161 34-202 3-197 (202)
25 1un2_A DSBA, thiol-disulfide i 94.7 0.034 1.2E-06 46.9 5.0 57 133-191 5-61 (197)
26 1v58_A Thiol:disulfide interch 85.1 1.3 4.4E-05 38.0 5.6 42 32-77 95-136 (241)
27 3gv1_A Disulfide interchange p 80.3 2.4 8.2E-05 33.8 5.1 39 32-77 12-50 (147)
28 3tdg_A DSBG, putative uncharac 78.8 2 6.7E-05 38.5 4.5 40 32-77 145-184 (273)
29 1t3b_A Thiol:disulfide interch 67.6 6.9 0.00024 32.5 5.0 41 32-77 84-124 (211)
30 2k8s_A Thioredoxin; dimer, str 63.9 13 0.00044 25.4 5.1 16 37-52 3-18 (80)
31 1fo5_A Thioredoxin; disulfide 61.7 8.2 0.00028 25.9 3.7 26 35-61 3-28 (85)
32 1eej_A Thiol:disulfide interch 58.4 12 0.00042 31.0 4.9 40 32-76 84-123 (216)
33 3msz_A Glutaredoxin 1; alpha-b 50.8 6.2 0.00021 27.1 1.5 17 36-52 4-20 (89)
34 1wjk_A C330018D20RIK protein; 45.7 23 0.00079 25.6 4.1 26 32-62 13-38 (100)
35 3qmx_A Glutaredoxin A, glutare 45.5 9.2 0.00031 28.0 1.8 21 32-52 12-32 (99)
36 3die_A Thioredoxin, TRX; elect 44.1 42 0.0014 23.1 5.2 33 33-67 18-50 (106)
37 1aba_A Glutaredoxin; electron 42.9 11 0.00038 26.3 1.9 15 38-52 2-20 (87)
38 2ct6_A SH3 domain-binding glut 42.9 15 0.0005 27.4 2.6 17 35-51 7-23 (111)
39 2trx_A Thioredoxin; electron t 42.5 50 0.0017 22.9 5.5 29 32-61 18-46 (108)
40 1thx_A Thioredoxin, thioredoxi 42.0 41 0.0014 23.5 4.9 34 32-67 23-56 (115)
41 3ctg_A Glutaredoxin-2; reduced 41.8 15 0.00052 28.2 2.6 16 37-52 38-53 (129)
42 1nsw_A Thioredoxin, TRX; therm 40.4 49 0.0017 22.8 5.1 29 32-61 15-43 (105)
43 3fz5_A Possible 2-hydroxychrom 40.0 16 0.00054 29.9 2.6 12 137-148 69-80 (202)
44 1fb6_A Thioredoxin M; electron 39.9 49 0.0017 22.7 5.0 33 33-67 17-49 (105)
45 2e0q_A Thioredoxin; electron t 39.7 51 0.0018 22.3 5.0 33 33-67 15-47 (104)
46 2i4a_A Thioredoxin; acidophIle 39.4 49 0.0017 22.7 5.0 29 32-61 18-46 (107)
47 2yzu_A Thioredoxin; redox prot 38.6 53 0.0018 22.5 5.0 28 33-61 17-44 (109)
48 3nzn_A Glutaredoxin; structura 38.5 14 0.00048 26.8 1.8 19 34-52 20-38 (103)
49 3c1r_A Glutaredoxin-1; oxidize 38.0 20 0.0007 26.8 2.8 22 37-62 26-47 (118)
50 3cxg_A Putative thioredoxin; m 37.9 31 0.0011 25.8 3.8 35 33-73 39-73 (133)
51 2lqo_A Putative glutaredoxin R 37.8 11 0.00037 27.7 1.1 16 37-52 5-20 (92)
52 1xwb_A Thioredoxin; dimerizati 36.6 69 0.0023 21.9 5.4 28 33-61 19-46 (106)
53 2wul_A Glutaredoxin related pr 36.5 37 0.0013 26.1 4.1 44 140-192 44-88 (118)
54 1fov_A Glutaredoxin 3, GRX3; a 36.2 15 0.00053 24.6 1.7 16 37-52 2-17 (82)
55 3ha9_A Uncharacterized thiored 35.5 51 0.0017 25.0 4.8 38 32-74 35-72 (165)
56 1dby_A Chloroplast thioredoxin 35.1 64 0.0022 22.2 5.0 28 33-61 18-45 (107)
57 1ego_A Glutaredoxin; electron 35.1 15 0.00051 24.9 1.4 16 37-52 2-17 (85)
58 1t00_A Thioredoxin, TRX; redox 34.4 65 0.0022 22.5 5.0 29 32-61 21-49 (112)
59 2axo_A Hypothetical protein AT 34.3 17 0.00059 32.2 2.0 21 32-52 40-60 (270)
60 3gnj_A Thioredoxin domain prot 34.2 70 0.0024 22.1 5.1 22 32-53 20-41 (111)
61 1nho_A Probable thioredoxin; b 33.9 13 0.00043 24.9 0.9 18 36-53 3-20 (85)
62 1w4v_A Thioredoxin, mitochondr 33.5 67 0.0023 23.1 5.0 29 32-61 29-57 (119)
63 2l5l_A Thioredoxin; structural 32.8 65 0.0022 23.8 5.0 28 33-61 37-64 (136)
64 2vlu_A Thioredoxin, thioredoxi 32.7 70 0.0024 22.8 5.0 33 33-67 33-65 (122)
65 4fo5_A Thioredoxin-like protei 32.6 56 0.0019 24.1 4.5 39 33-74 31-69 (143)
66 2l57_A Uncharacterized protein 32.0 82 0.0028 22.6 5.3 30 32-62 24-53 (126)
67 1h75_A Glutaredoxin-like prote 31.6 19 0.00065 24.2 1.5 16 37-52 2-17 (81)
68 1ti3_A Thioredoxin H, PTTRXH1; 31.5 75 0.0026 22.1 4.9 28 33-61 25-52 (113)
69 2o8v_B Thioredoxin 1; disulfid 31.4 75 0.0026 23.4 5.1 34 32-67 38-71 (128)
70 3tco_A Thioredoxin (TRXA-1); d 31.4 78 0.0027 21.6 4.9 33 33-67 20-52 (109)
71 1r7h_A NRDH-redoxin; thioredox 31.2 20 0.00068 23.5 1.5 16 37-52 2-17 (75)
72 3m9j_A Thioredoxin; oxidoreduc 31.0 81 0.0028 21.5 4.9 33 33-67 19-51 (105)
73 2b5x_A YKUV protein, TRXY; thi 30.9 56 0.0019 23.7 4.2 36 33-70 28-63 (148)
74 1kte_A Thioltransferase; redox 30.6 24 0.00083 25.0 2.0 16 37-52 13-28 (105)
75 2i1u_A Thioredoxin, TRX, MPT46 30.2 83 0.0028 22.2 5.0 29 32-61 28-56 (121)
76 1t1v_A SH3BGRL3, SH3 domain-bi 29.7 27 0.00093 24.7 2.1 14 37-50 3-16 (93)
77 3eyt_A Uncharacterized protein 29.5 67 0.0023 23.9 4.5 40 33-74 27-66 (158)
78 3hxs_A Thioredoxin, TRXP; elec 29.4 84 0.0029 23.0 5.1 33 33-67 50-82 (141)
79 3h8q_A Thioredoxin reductase 3 29.2 18 0.00062 26.8 1.1 16 37-52 18-33 (114)
80 3l4n_A Monothiol glutaredoxin- 29.0 23 0.00078 27.4 1.7 16 37-52 15-30 (127)
81 2khp_A Glutaredoxin; thioredox 28.9 22 0.00077 24.6 1.5 16 37-52 7-22 (92)
82 1ep7_A Thioredoxin CH1, H-type 28.4 86 0.0029 21.7 4.8 27 34-61 24-50 (112)
83 3l4n_A Monothiol glutaredoxin- 28.4 72 0.0024 24.5 4.5 30 158-192 53-82 (127)
84 2xc2_A Thioredoxinn; oxidoredu 28.2 36 0.0012 24.3 2.6 21 33-53 32-52 (117)
85 3ic4_A Glutaredoxin (GRX-1); s 28.1 18 0.00061 25.1 0.9 17 36-52 12-28 (92)
86 3lor_A Thiol-disulfide isomera 27.8 98 0.0033 22.9 5.2 40 33-74 29-68 (160)
87 1zzo_A RV1677; thioredoxin fol 27.7 60 0.0021 23.1 3.8 29 33-62 24-52 (136)
88 2dml_A Protein disulfide-isome 26.8 53 0.0018 23.7 3.4 34 32-67 33-66 (130)
89 3ipz_A Monothiol glutaredoxin- 26.7 22 0.00075 26.3 1.2 16 37-52 19-39 (109)
90 1xfl_A Thioredoxin H1; AT3G510 26.5 88 0.003 22.8 4.7 28 33-61 37-64 (124)
91 3qfa_C Thioredoxin; protein-pr 25.7 1.1E+02 0.0036 21.9 4.9 33 33-67 30-62 (116)
92 3erw_A Sporulation thiol-disul 25.6 1.4E+02 0.0047 21.4 5.6 32 33-66 33-64 (145)
93 3f3q_A Thioredoxin-1; His TAG, 25.6 1.2E+02 0.004 21.4 5.1 29 32-61 22-50 (109)
94 3rhb_A ATGRXC5, glutaredoxin-C 25.5 29 0.001 25.2 1.7 15 38-52 21-35 (113)
95 2hze_A Glutaredoxin-1; thiored 25.2 32 0.0011 25.2 1.9 16 37-52 20-35 (114)
96 3uvt_A Thioredoxin domain-cont 25.0 1.1E+02 0.0036 21.0 4.7 20 34-53 21-40 (111)
97 2oe3_A Thioredoxin-3; electron 24.7 96 0.0033 22.2 4.5 33 33-67 29-61 (114)
98 1syr_A Thioredoxin; SGPP, stru 24.5 1.2E+02 0.0042 21.2 5.0 29 32-61 24-52 (112)
99 2klx_A Glutaredoxin; thioredox 24.3 21 0.00073 24.7 0.7 16 37-52 7-22 (89)
100 3gl3_A Putative thiol:disulfid 24.1 1.1E+02 0.0037 22.5 4.8 30 32-62 26-55 (152)
101 3ul3_B Thioredoxin, thioredoxi 23.9 1.2E+02 0.004 22.0 4.9 29 32-61 40-68 (128)
102 3aps_A DNAJ homolog subfamily 23.8 99 0.0034 21.9 4.4 29 32-61 19-47 (122)
103 3zyw_A Glutaredoxin-3; metal b 23.7 27 0.00092 26.1 1.2 14 179-192 70-83 (111)
104 2yan_A Glutaredoxin-3; oxidore 23.6 37 0.0013 24.5 1.9 15 38-52 19-38 (105)
105 3hz4_A Thioredoxin; NYSGXRC, P 23.2 95 0.0033 23.0 4.3 22 32-53 22-43 (140)
106 2e7p_A Glutaredoxin; thioredox 23.0 40 0.0014 24.1 2.1 15 38-52 22-36 (116)
107 1lu4_A Soluble secreted antige 23.0 83 0.0028 22.4 3.8 29 33-62 23-51 (136)
108 3uor_A ABC transporter sugar b 22.8 87 0.003 28.3 4.7 66 1-77 1-66 (458)
109 1gh2_A Thioredoxin-like protei 22.5 55 0.0019 22.8 2.7 21 33-53 20-40 (107)
110 2l5o_A Putative thioredoxin; s 22.4 1.2E+02 0.0043 22.1 4.9 29 33-62 27-55 (153)
111 3s9f_A Tryparedoxin; thioredox 22.1 87 0.003 24.1 4.0 40 33-74 47-86 (165)
112 2vm1_A Thioredoxin, thioredoxi 22.1 50 0.0017 23.2 2.4 28 33-61 27-54 (118)
113 2vim_A Thioredoxin, TRX; thior 22.0 55 0.0019 22.3 2.5 28 33-61 18-45 (104)
114 2lrt_A Uncharacterized protein 21.9 80 0.0027 23.8 3.7 39 33-74 34-72 (152)
115 1rw1_A Conserved hypothetical 21.9 35 0.0012 25.5 1.5 16 38-53 2-17 (114)
116 1wik_A Thioredoxin-like protei 21.9 43 0.0015 24.4 2.0 16 37-52 16-36 (109)
117 2voc_A Thioredoxin; electron t 21.8 84 0.0029 22.2 3.6 21 33-53 16-36 (112)
118 3d6i_A Monothiol glutaredoxin- 21.7 51 0.0018 23.1 2.4 21 33-53 20-40 (112)
119 3or5_A Thiol:disulfide interch 21.5 1.3E+02 0.0043 22.4 4.8 29 33-62 33-61 (165)
120 4evm_A Thioredoxin family prot 21.5 1.5E+02 0.0051 20.7 5.0 33 33-67 21-53 (138)
121 3gx8_A Monothiol glutaredoxin- 21.4 31 0.0011 26.1 1.2 14 179-192 73-86 (121)
122 2wem_A Glutaredoxin-related pr 21.2 32 0.0011 26.1 1.2 14 179-192 75-88 (118)
123 1zma_A Bacterocin transport ac 20.9 57 0.0019 23.3 2.5 21 33-53 28-48 (118)
124 2l6c_A Thioredoxin; oxidoreduc 20.8 59 0.002 23.1 2.6 21 33-53 18-38 (110)
125 1z6n_A Hypothetical protein PA 20.8 47 0.0016 26.6 2.2 21 33-53 53-73 (167)
126 1uvq_C Orexin; immunology, MHC 20.5 50 0.0017 19.7 1.6 17 172-188 4-20 (33)
127 1o73_A Tryparedoxin; electron 20.3 1.5E+02 0.005 21.5 4.8 29 33-62 27-55 (144)
128 2djj_A PDI, protein disulfide- 20.1 64 0.0022 22.9 2.6 23 32-54 23-45 (121)
No 1
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=98.47 E-value=1.8e-06 Score=73.67 Aligned_cols=159 Identities=12% Similarity=0.175 Sum_probs=107.2
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCC--CeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhh
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLS--TIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINA 109 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~ 109 (258)
...+|.|..|+.=.||+|++|- ..+.|.+..++. ..|.|.+.||-- ||+.-=..-..-.|+...
T Consensus 27 ~~a~vtvvef~D~~CP~C~~~~-~~~~~~l~~~~~~~g~v~~~~~~~p~-------------~~~~s~~Aa~aa~a~~~~ 92 (202)
T 3gha_A 27 DDAPVTVVEFGDYKCPSCKVFN-SDIFPKIQKDFIDKGDVKFSFVNVMF-------------HGKGSRLAALASEEVWKE 92 (202)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-HHTHHHHHHHTTTTTSEEEEEEECCC-------------SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCChhHHHHH-HHhhHHHHHHhccCCeEEEEEEecCc-------------cchhHHHHHHHHHHHHhh
Confidence 5679999999999999999995 456676643443 367777776631 232211122222344332
Q ss_pred CCcchhhhhhhhhhccccCCC--C-CchHHHHHHHHH-cCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEE
Q 025043 110 WPDVRIHFKLIQCIEGQASAS--E-QPEAAWRKCCND-LGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVT 185 (258)
Q Consensus 110 ~~~~~~~l~fI~Cm~~~~~~~--~-~~~~~~~~Ca~~-~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~ 185 (258)
++.++++|..=+....... . .........++. .|+|.+.+.+|.++......+.+..+....+. ++.+|+++
T Consensus 93 --~~~~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~g--V~gtPtfv 168 (202)
T 3gha_A 93 --DPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMN--IQATPTIY 168 (202)
T ss_dssp --CGGGHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTT--CCSSCEEE
T ss_pred --CHHHHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcC--CCcCCEEE
Confidence 4567888877776321110 0 233456678888 89999999999998888887777777776654 89999999
Q ss_pred ECCeecH--HHHhHHHHHHHHhhcC
Q 025043 186 VNNQALE--EAFQNFIAYVCKAYKG 208 (258)
Q Consensus 186 iNG~~~~--~a~~nL~~~VC~~y~g 208 (258)
|||++.. ...+.|.+.|=+...+
T Consensus 169 vnG~~~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 169 VNDKVIKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp ETTEECSCTTCHHHHHHHHHHHHHH
T ss_pred ECCEEecCCCCHHHHHHHHHHHHHh
Confidence 9999863 3456777777666655
No 2
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=98.42 E-value=4.1e-06 Score=69.37 Aligned_cols=157 Identities=12% Similarity=0.174 Sum_probs=98.2
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCC--CeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhh
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLS--TIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINA 109 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~ 109 (258)
...+|.|.+|+.-.||+|.+|- ..|.+.+..+.. .-|.|.+.||.- ||+.-=.....-.|+...
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~-~~l~~~l~~~~~~~~~v~~~~~~~p~-------------~~~~s~~aa~a~~~a~~~ 74 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELD-EKVMPKLRKNYIDNHKVEYQFVNLAF-------------LGKDSIVGSRASHAVLMY 74 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSSEEEEEECCC-------------SCTTHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCChhHHHHH-HHHHHHHHHHhccCCeEEEEEEecCc-------------CCcchHHHHHHHHHHHHh
Confidence 3568999999999999999995 345565532343 357788877732 122211223334455433
Q ss_pred CCcchhhhhhhhhhccccCC---CCCchHHHHHHHHHcCCCchh---hhhhc--cCCchHHHHHHHHHHhccCCCCCcee
Q 025043 110 WPDVRIHFKLIQCIEGQASA---SEQPEAAWRKCCNDLGFSQQP---IDNCY--QSGEGTKLTLKYAEETDSLKPPHRFV 181 (258)
Q Consensus 110 ~~~~~~~l~fI~Cm~~~~~~---~~~~~~~~~~Ca~~~gld~~~---I~~C~--~s~~G~~Ll~~~~~~T~~l~P~~~~V 181 (258)
+....+.|..=+...... ...........++..|+|.+. +.+|. ++......+.+.-+....+ .+..+
T Consensus 75 --~~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~Gt 150 (186)
T 3bci_A 75 --APKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDN--HIKTT 150 (186)
T ss_dssp --CGGGHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHT--TCCSS
T ss_pred --CHHHHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc--CCCCC
Confidence 223456665544421110 012345567888999999998 99999 8877777777766666655 48999
Q ss_pred eEEEECCeecH--HHHhHHHHHHHHhh
Q 025043 182 PWVTVNNQALE--EAFQNFIAYVCKAY 206 (258)
Q Consensus 182 PwI~iNG~~~~--~a~~nL~~~VC~~y 206 (258)
|+++|||+... ...+.|.+.|=...
T Consensus 151 Pt~vvnG~~~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 151 PTAFINGEKVEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp SEEEETTEECSCTTCHHHHHHHHHC--
T ss_pred CeEEECCEEcCCCCCHHHHHHHHHHHH
Confidence 99999999763 23456666654443
No 3
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.40 E-value=4.1e-06 Score=68.35 Aligned_cols=147 Identities=12% Similarity=0.168 Sum_probs=97.0
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWP 111 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~ 111 (258)
...+|.|.+|+...||+|++|. ..|.++++ +..+ +.|.++++.-. |+.-=...+.-.|+..
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~-~~l~~l~~-~~~~-v~~~~~~~p~~-------------~~~s~~aa~~~~~a~~--- 80 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAM-AEVQGLVD-ADPN-VRLVYREWPIL-------------GEGSDFAARAALAARQ--- 80 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-HHHHHHHH-HCTT-EEEEEEECCCS-------------CHHHHHHHHHHHHGGG---
T ss_pred CCCCEEEEEEECCCCccHHHHH-HHHHHHHH-hCCC-EEEEEEeCCCC-------------CCChHHHHHHHHHHHH---
Confidence 5678999999999999999996 46777765 4555 66666665321 1211112222333332
Q ss_pred cchhhhhhhhhhccccCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCeec
Q 025043 112 DVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQAL 191 (258)
Q Consensus 112 ~~~~~l~fI~Cm~~~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 191 (258)
...++.|..=+....... ........++..|+|.+.+.+|.++......+.+..+....+. +..+|+++|||+..
T Consensus 81 -~~~~~~~~~~lf~~~~~~--~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~g--v~gtPt~~i~g~~~ 155 (175)
T 3gyk_A 81 -QGKYEAFHWALMGMSGKA--NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLG--FNGTPSFVVEDALV 155 (175)
T ss_dssp -GTCHHHHHHHHHTCSSCC--SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHT--CCSSSEEEETTEEE
T ss_pred -HhHHHHHHHHHHhcCCCC--CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcC--CccCCEEEECCEEe
Confidence 234455554444221112 3445667899999999999999999999988888877777764 88999999999875
Q ss_pred H--HHHhHHHHHH
Q 025043 192 E--EAFQNFIAYV 202 (258)
Q Consensus 192 ~--~a~~nL~~~V 202 (258)
. .....|.+.|
T Consensus 156 ~G~~~~~~l~~~i 168 (175)
T 3gyk_A 156 PGFVEQSQLQDAV 168 (175)
T ss_dssp CSCCCHHHHHHHH
T ss_pred eCCCCHHHHHHHH
Confidence 2 1234454444
No 4
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.23 E-value=8.4e-06 Score=67.38 Aligned_cols=136 Identities=14% Similarity=0.058 Sum_probs=89.4
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCCc
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWPD 112 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~~ 112 (258)
..+|.|.+|+...||+|..|.. .|..+.+ +..+.|.++.+|+... .+ . =...+.-.|+...
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~~----~~---------s-~~a~~a~~~a~~~--- 84 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDS-KLQAWGA-RQAKDVRFTLVPAVFG----GV---------W-DPFARAYLAADVL--- 84 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHHH-TSCTTEEEEEEECCCS----TT---------H-HHHHHHHHHHHHT---
T ss_pred CCCeEEEEEECCCChhHhhhhH-HHHHHHH-hcCCceEEEEeCcccC----CC---------c-HHHHHHHHHHHHc---
Confidence 5689999999999999999964 5666654 4555678888887321 11 0 0111222333221
Q ss_pred chhhhhhhhhhccc----cC---CCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEE
Q 025043 113 VRIHFKLIQCIEGQ----AS---ASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVT 185 (258)
Q Consensus 113 ~~~~l~fI~Cm~~~----~~---~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~ 185 (258)
...+.|..-+... .. .. .........++..|+|.+.+.+|.++......+.+..+....+. ++.+|+++
T Consensus 85 -~~~~~~~~~lf~~~~~~~~~~~~~-~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~g--v~gtPt~v 160 (193)
T 2rem_A 85 -GVAKRSHTAMFEAIHEKGSVPIQN-VGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVR--PVGTPTIV 160 (193)
T ss_dssp -TCHHHHHHHHHHHHHTTCCSCSTT-CCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHC--CSSSSEEE
T ss_pred -CcHHHHHHHHHHHHHHhcccCcCC-CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHhC--CCCCCeEE
Confidence 2334444443321 00 11 23455677899999999999999999888888777766666654 89999999
Q ss_pred ECCeec
Q 025043 186 VNNQAL 191 (258)
Q Consensus 186 iNG~~~ 191 (258)
|||+..
T Consensus 161 ing~~~ 166 (193)
T 2rem_A 161 VNGRYM 166 (193)
T ss_dssp ETTTEE
T ss_pred ECCEEE
Confidence 999864
No 5
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.22 E-value=1.3e-05 Score=65.22 Aligned_cols=154 Identities=16% Similarity=0.205 Sum_probs=89.2
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWP 111 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~ 111 (258)
...++.|..|+.=.||+|++|- ..+.++.+ +..+-+.+.++|+--.. ++..=..-...+|+...-.
T Consensus 19 ~~~~~~vvEf~dy~Cp~C~~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~------------~~~~~~~a~a~~~~~~~~~ 84 (184)
T 4dvc_A 19 ASSSPVVSEFFSFYCPHCNTFE-PIIAQLKQ-QLPEGAKFQKNHVSFMG------------GNMGQAMSKAYATMIALEV 84 (184)
T ss_dssp CCSSCEEEEEECTTCHHHHHHH-HHHHHHHH-TSCTTCEEEEEECSSSS------------GGGHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEECCCCHhHHHHh-HHHHHHHh-hcCCceEEEEEecCCCC------------CchHHHHHHHHHHHHHcCc
Confidence 3456788889999999999994 45666664 56665666666542110 0000011122223322211
Q ss_pred cchhhhhhhhhhccccCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCeec
Q 025043 112 DVRIHFKLIQCIEGQASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQAL 191 (258)
Q Consensus 112 ~~~~~l~fI~Cm~~~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 191 (258)
....+..+..=+...... .........=+...|+|.+.+.+|.++..-...+.+..+....+. ++.+|+++|||++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~g--v~gTPtfiINGky~ 161 (184)
T 4dvc_A 85 EDKMVPVMFNRIHTLRKP-PKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSG--LTGVPAVVVNNRYL 161 (184)
T ss_dssp HHHHHHHHHHHHHTSCCC-CSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHT--CCSSSEEEETTTEE
T ss_pred HHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcC--CCcCCEEEECCEEe
Confidence 111111111111111111 123344556688899999999999999888888877777776664 89999999999864
Q ss_pred --H---HHHhHHHHHH
Q 025043 192 --E---EAFQNFIAYV 202 (258)
Q Consensus 192 --~---~a~~nL~~~V 202 (258)
. ..+++|.+.|
T Consensus 162 v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 162 VQGQSAKSLDEYFDLV 177 (184)
T ss_dssp ECGGGCSSHHHHHHHH
T ss_pred eCCcCCCCHHHHHHHH
Confidence 1 1245565554
No 6
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.15 E-value=4.5e-05 Score=63.41 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=88.6
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWP 111 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~ 111 (258)
...++.|.+|+...||.|++|. ..|..+.+ +..+.+.+..+|.-. | +.-=...+.-.|+...-
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~-~~l~~l~~-~~~~~v~~~~~~~~~-------------~-~~s~~aa~a~~aa~~~g- 85 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIE-PMVEDWAK-TAPQDVVLKQVPIAF-------------N-AGMKPLQQLYYTLQALE- 85 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHH-HHHHHHHH-TCCTTEEEEEEECCS-------------S-GGGHHHHHHHHHHHHTT-
T ss_pred CCCCeEEEEEECCCCccHHHhh-HHHHHHHH-HCCCCeEEEEEeccc-------------C-cchHHHHHHHHHHHhcC-
Confidence 4578999999999999999995 34444443 555667777776532 0 00011222233333211
Q ss_pred cchhhhhhhhhhcc----ccCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEEC
Q 025043 112 DVRIHFKLIQCIEG----QASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVN 187 (258)
Q Consensus 112 ~~~~~l~fI~Cm~~----~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN 187 (258)
.++|..=+.. ..... .........++..|+|.+.+.+|.++.+....+.+..+....+. +..+|+++||
T Consensus 86 ----~~~~~~~lf~~~~~~~~~~-~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~g--v~gtPt~vin 158 (195)
T 3hd5_A 86 ----RPDLHPKVFTAIHTERKRL-FDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQLAEAAH--IDGTPAFAVG 158 (195)
T ss_dssp ----CTTHHHHHHHHHHTSCCCC-CSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHTT--CCSSSEEEET
T ss_pred ----HHHHHHHHHHHHHHhccCC-CCHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhC--CCcCceEEEC
Confidence 2233222211 11111 23455678899999999999999999988888888888777764 8999999999
Q ss_pred Ceec
Q 025043 188 NQAL 191 (258)
Q Consensus 188 G~~~ 191 (258)
|++.
T Consensus 159 g~~~ 162 (195)
T 3hd5_A 159 GRYM 162 (195)
T ss_dssp TTEE
T ss_pred CEEE
Confidence 9975
No 7
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.15 E-value=8.6e-06 Score=67.65 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=89.9
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWP 111 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~ 111 (258)
...+|.|..|+...||.|++|.. .|..+. .+..+.+.++.+|... |+... ...+.-.|+..
T Consensus 23 ~~~~~~i~~f~d~~Cp~C~~~~~-~l~~l~-~~~~~~v~~~~~p~~~-------------~~~~~-~aa~a~~aa~~--- 83 (192)
T 3h93_A 23 QPGKIEVVELFWYGCPHCYAFEP-TIVPWS-EKLPADVHFVRLPALF-------------GGIWN-VHGQMFLTLES--- 83 (192)
T ss_dssp STTSEEEEEEECTTCHHHHHHHH-HHHHHH-HTCCTTEEEEEEECCC-------------STHHH-HHHHHHHHHHH---
T ss_pred CCCCCEEEEEECCCChhHHHhhH-HHHHHH-HhCCCCeEEEEEehhh-------------ccchH-HHHHHHHHHHH---
Confidence 36789999999999999999964 444433 3566667777777521 11100 01112223322
Q ss_pred cchhhhhhhhhhccc----cCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEEC
Q 025043 112 DVRIHFKLIQCIEGQ----ASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVN 187 (258)
Q Consensus 112 ~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN 187 (258)
....++|..=+... .... .........++..|+|.+.+.+|.++......+.+..+....+ .+..+||++||
T Consensus 84 -~g~~~~~~~~lf~~~~~~~~~~-~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~vn 159 (192)
T 3h93_A 84 -MGVEHDVHNAVFEAIHKEHKKL-ATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAY--QVTGVPTMVVN 159 (192)
T ss_dssp -HTCCHHHHHHHHHHHHTSCCCC-CSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHH--TCCSSSEEEET
T ss_pred -cCCHHHHHHHHHHHHHHhCcCC-CCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHh--CCCCCCeEEEC
Confidence 12344554444321 1111 2345567889999999999999999988888888877777666 48999999999
Q ss_pred Ceec
Q 025043 188 NQAL 191 (258)
Q Consensus 188 G~~~ 191 (258)
|++.
T Consensus 160 g~~~ 163 (192)
T 3h93_A 160 GKYR 163 (192)
T ss_dssp TTEE
T ss_pred CEEE
Confidence 9975
No 8
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=98.14 E-value=1.2e-05 Score=70.01 Aligned_cols=154 Identities=9% Similarity=0.110 Sum_probs=97.2
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcC--CCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhh
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDL--STIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINA 109 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l--~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~ 109 (258)
...+|.|.+|..=.||+|++|-. .+.|.+..++ ..-|.|.+.+|-- | +.--.+-..-.|+
T Consensus 37 ~~A~vtIvef~Dy~CP~C~~~~~-~~~~~l~~~~~~~g~V~~v~~~~p~-------------~-~~s~~Aa~aa~aa--- 98 (226)
T 3f4s_A 37 PKAPILMIEYASLTCYHCSLFHR-NVFPKIKEKYIDTGKMLYIFRHFPL-------------D-YRGLKAAMLSHCY--- 98 (226)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH-HTHHHHHHHHTTTTSEEEEEEECCC-------------S-HHHHHHHHHGGGC---
T ss_pred CCCCEEEEEEECCCCHHHHHHHH-HHHHHHHHHcccCCeEEEEEEeCCC-------------C-hhHHHHHHHHHHh---
Confidence 56789999999999999999954 3555553233 2346655555421 0 1101111222232
Q ss_pred CCcchhhhhhhhhhccccCCC----CCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhcc-CCCCCceeeEE
Q 025043 110 WPDVRIHFKLIQCIEGQASAS----EQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDS-LKPPHRFVPWV 184 (258)
Q Consensus 110 ~~~~~~~l~fI~Cm~~~~~~~----~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~-l~P~~~~VPwI 184 (258)
.++..+++|..=+....... ..........++..|+|.+.+.+|.++......+.+..+.... +. ++.+|++
T Consensus 99 -~~~~~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~G--V~GtPtf 175 (226)
T 3f4s_A 99 -EKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLG--ITAVPIF 175 (226)
T ss_dssp -CSHHHHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHC--CCSSCEE
T ss_pred -hChHHHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcC--CCcCCEE
Confidence 24456677766655321111 1134556788999999999999999998888777776666655 54 8899999
Q ss_pred EE---CCeecH--HH--------HhHHHHHHHHhh
Q 025043 185 TV---NNQALE--EA--------FQNFIAYVCKAY 206 (258)
Q Consensus 185 ~i---NG~~~~--~a--------~~nL~~~VC~~y 206 (258)
+| ||+... .. .+.|.+.|=...
T Consensus 176 vv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 176 FIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp EEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred EEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHH
Confidence 99 999753 23 566666665443
No 9
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.98 E-value=9.7e-05 Score=62.03 Aligned_cols=136 Identities=21% Similarity=0.178 Sum_probs=86.6
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCCc
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWPD 112 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~~ 112 (258)
..+|.|..|+.-.||.|++|- ..|..+. .+..+.+.|+.+|... ||.. =...+.-.|+...-.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~-~~l~~~~-~~~~~~v~~~~~p~~~-------------~~~~-~~aa~a~~aa~~~g~- 85 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLE-PVLSKHA-KSFKDDMYLRTEHVVW-------------QKEM-LTLARLAAAVDMAAA- 85 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHH-HHHHHHH-TTCCTTEEEEEEECCC-------------SGGG-HHHHHHHHHHHHHTG-
T ss_pred CCCcEEEEEECCCChhHHHHH-HHHHHHH-HHCCCCeEEEEecCCC-------------Cccc-HHHHHHHHHHHHcCc-
Confidence 468999999999999999995 3444443 3566667777777631 1111 012233334432211
Q ss_pred chhhhh--hhhh----hccccCCCCCchHHHHHHHHHc-CCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEE
Q 025043 113 VRIHFK--LIQC----IEGQASASEQPEAAWRKCCNDL-GFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVT 185 (258)
Q Consensus 113 ~~~~l~--fI~C----m~~~~~~~~~~~~~~~~Ca~~~-gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~ 185 (258)
+++ |..= +....... .........+... |+|.+.+.+|.++......+.+..+....+. ++.+|+++
T Consensus 86 ---~~~~~~~~~lf~a~~~~~~~~-~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~g--v~gtPt~v 159 (193)
T 3hz8_A 86 ---DSKDVANSHIFDAMVNQKIKL-QNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETFQ--IDGVPTVI 159 (193)
T ss_dssp ---GGHHHHHHHHHHHHHTSCCCT-TSHHHHHHHHHHCTTTTHHHHHHHHHSHHHHHHHHHHHHHHHHTT--CCSSSEEE
T ss_pred ---hhHHhHHHHHHHHHHHhCcCC-CCHHHHHHHHHHccCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhC--CCcCCEEE
Confidence 111 2111 11111111 2345566788899 9999999999999888888887777776664 89999999
Q ss_pred ECCeec
Q 025043 186 VNNQAL 191 (258)
Q Consensus 186 iNG~~~ 191 (258)
|||++.
T Consensus 160 vng~~~ 165 (193)
T 3hz8_A 160 VGGKYK 165 (193)
T ss_dssp ETTTEE
T ss_pred ECCEEE
Confidence 999975
No 10
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=97.97 E-value=2.3e-05 Score=67.25 Aligned_cols=153 Identities=12% Similarity=0.207 Sum_probs=98.8
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcC--CCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhh
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDL--STIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINA 109 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l--~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~ 109 (258)
...+|.|.+|..=.||+|++|- ..+.|.+..++ .+.|.|.+.+|- . |+... ..-..-.|+
T Consensus 13 ~~a~vtivef~D~~Cp~C~~~~-~~~~~~l~~~~i~~g~v~~v~r~~p--l-----------~~~s~-~aa~aa~~~--- 74 (205)
T 3gmf_A 13 PAAKLRLVEFVSYTCPHCSHFE-IESEGQLKIGMVQPGKGAIEVRNFV--R-----------DPIDM-TVALITNCV--- 74 (205)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSEEEEEEECC--C-----------SHHHH-HHHHHHHHS---
T ss_pred CCCCeEEEEEECCCCHHHHHHH-HHHHHHHHHHhccCCeEEEEEEeCC--C-----------CcchH-HHHHHHHhc---
Confidence 4789999999999999999996 46777775334 345666666651 0 21111 112222332
Q ss_pred CCcchhhhhhhhhhccccC-------CCCCc-------------------hHHHHHHHHHcCCCchhhhhhccCCchHHH
Q 025043 110 WPDVRIHFKLIQCIEGQAS-------ASEQP-------------------EAAWRKCCNDLGFSQQPIDNCYQSGEGTKL 163 (258)
Q Consensus 110 ~~~~~~~l~fI~Cm~~~~~-------~~~~~-------------------~~~~~~Ca~~~gld~~~I~~C~~s~~G~~L 163 (258)
.+.++|+|..=++..-. ..... .......+...|+|.+.+.+|.++......
T Consensus 75 --~~~~f~~~~~~Lf~~q~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ia~~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~ 152 (205)
T 3gmf_A 75 --PPSRFFTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRSTLDRCLSNEALAKK 152 (205)
T ss_dssp --CHHHHHHHHHHHHHTHHHHCHHHHHCCHHHHHTTSSSCHHHHHHHHHHHTTHHHHHHTTTCCHHHHHHHHTCHHHHHH
T ss_pred --CHhHHHHHHHHHHHcCHHHHhcccccchhhhhccccchhHHHHHhccCHHHHHHHHHHcCCCHHHHHHHHcCHHHHHH
Confidence 45678888877763211 01000 012346777899999999999999877777
Q ss_pred HHHHHHHh-ccCCCCCceeeEEEECCeecH--HHHhHHHHHHHHhh
Q 025043 164 TLKYAEET-DSLKPPHRFVPWVTVNNQALE--EAFQNFIAYVCKAY 206 (258)
Q Consensus 164 l~~~~~~T-~~l~P~~~~VPwI~iNG~~~~--~a~~nL~~~VC~~y 206 (258)
+.+..+.. ..+. ++.+|+++|||+... ...+.|.+.|=...
T Consensus 153 v~~~~~~a~~~~G--V~GtPtfvvng~~~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 153 LAAETDEAINQYN--VSGTPSFMIDGILLAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHHHHHHHC--CCSSSEEEETTEECTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC--CccCCEEEECCEEEeCCCCHHHHHHHHHHHh
Confidence 76666655 5554 889999999999864 23556766665443
No 11
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.96 E-value=3.1e-05 Score=64.13 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=89.8
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWP 111 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~ 111 (258)
...+|.|.+|+...||+|.+|.. .|..+.+ +..+.+.++.+|... |+.. -...+.-.|+..
T Consensus 20 ~~~~~~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~-------------~~~s-~~aa~a~~aa~~--- 80 (195)
T 2znm_A 20 QSGKIEVLEFFGYFCVHCHHFDP-LLLKLGK-ALPSDAYLRTEHVVW-------------QPEM-LGLARMAAAVNL--- 80 (195)
T ss_dssp SSSSEEEEEEECTTSCCTTSSCH-HHHHHHH-HSCTTEEEEEEECCC-------------SGGG-HHHHHHHHHHHH---
T ss_pred CCCCcEEEEEECCCChhHHHHhH-HHHHHHH-HCCCceEEEEecccc-------------Cccc-HHHHHHHHHHHH---
Confidence 35789999999999999999964 4666554 445567788777621 1111 112222333322
Q ss_pred cchhhhhhhhhhccc----cCCCCCchHHHHHHHHHc-CCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEE
Q 025043 112 DVRIHFKLIQCIEGQ----ASASEQPEAAWRKCCNDL-GFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTV 186 (258)
Q Consensus 112 ~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~Ca~~~-gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~i 186 (258)
....+.|..=+... .... .........++.. |+|.+.+.+|.++.+....+.+..+....+. +..+|+++|
T Consensus 81 -~~~~~~~~~~lf~~~~~~~~~~-~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~g--v~gtPt~vi 156 (195)
T 2znm_A 81 -SGLKYQANPAVFKAVYEQKIRL-ENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYR--IDSTPTVIV 156 (195)
T ss_dssp -HTCHHHHHHHHHHHHHHCSSCT-TSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTT--CCSSSEEEE
T ss_pred -cCcHHHHHHHHHHHHHHhCCCC-CCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcC--CCCCCeEEE
Confidence 12345555444321 1111 2344567789999 9999999999999888888887777666654 899999999
Q ss_pred CCee
Q 025043 187 NNQA 190 (258)
Q Consensus 187 NG~~ 190 (258)
||++
T Consensus 157 ng~~ 160 (195)
T 2znm_A 157 GGKY 160 (195)
T ss_dssp TTTE
T ss_pred CCEE
Confidence 9986
No 12
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.79 E-value=0.00014 Score=60.79 Aligned_cols=139 Identities=13% Similarity=0.076 Sum_probs=85.7
Q ss_pred eeEEEEEEEeCChhhHHHHHHh-hHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCCcc
Q 025043 35 KVKLSLYYESLCPYCANFIENQ-LVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWPDV 113 (258)
Q Consensus 35 kV~V~vYyESlCPd~~~Fi~~q-L~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~~~ 113 (258)
++.|..|+--.||.|++|-... +.+.+...+.+.+.|.++|+--- . .. .+ ..-+.-.|+...- ..
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~-~~---------s~-~aa~a~~aA~~~g-~~ 80 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL--G-PL---------GH-ELTRAWALAMVMK-ET 80 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS--S-TT---------HH-HHHHHHHHHHHHT-CH
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc--c-cc---------cH-HHHHHHHHHHHcC-cH
Confidence 5678889999999999995432 34666545566567766665221 0 00 00 1112223443321 11
Q ss_pred hhhh-hhhhhhccccCCCCCchHHHHHHHHHc-CCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCeec
Q 025043 114 RIHF-KLIQCIEGQASASEQPEAAWRKCCNDL-GFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQAL 191 (258)
Q Consensus 114 ~~~l-~fI~Cm~~~~~~~~~~~~~~~~Ca~~~-gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 191 (258)
.... .+..=+..... . .........+... |+|.+.+.+|.++......+.+..+....+. ++.+|+++|||++.
T Consensus 81 ~~~~~~lf~a~~~~~~-~-~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~g--v~GtPt~~vng~~~ 156 (189)
T 3l9v_A 81 DVIEKAFFTAGMVEKR-L-HSPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVALQERLFKEYG--VRGTPSVYVRGRYH 156 (189)
T ss_dssp HHHHHHHHHHHTTTCC-C-CSHHHHHHHHHHHHCCCHHHHHHHTTSHHHHHHHHHHHHHHHHTT--CCSSSEEEETTTEE
T ss_pred HHHHHHHHHHHhhhcc-C-CCHHHHHHHHHHccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHhC--CCccCEEEECCEEE
Confidence 1111 22222221111 2 2345567889999 9999999999999888888887777776654 89999999999874
No 13
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.61 E-value=0.00035 Score=58.79 Aligned_cols=140 Identities=19% Similarity=0.180 Sum_probs=83.5
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhh--HHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQL--VKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAW 110 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL--~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~ 110 (258)
..++.|..|+.-.||.|++|-. .| .|.|...+.+-+.|.++|+---. .... ..-+.-.++...
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~-~l~~~~~l~~~~~~~v~~~~~~~~~~~---~~s~----------~aa~a~~aA~~~- 84 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEE-VLHVSDNVKKKLPEGTKMTKYHVEFLG---PLGK----------ELTQAWAVAMAL- 84 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHH-TSCHHHHHHHHSCTTCCEEEEECSSSS---TTHH----------HHHHHHHHHHHH-
T ss_pred CCCCeEEEEECCCChhHHHhCh-hccchHHHHHhCCCCcEEEEEeccccc---ccCH----------HHHHHHHHHHHc-
Confidence 3478999999999999999953 33 35554456555666666652210 0000 000011111111
Q ss_pred Ccchhhhh-hhhhhccccCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCe
Q 025043 111 PDVRIHFK-LIQCIEGQASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQ 189 (258)
Q Consensus 111 ~~~~~~l~-fI~Cm~~~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~ 189 (258)
........ +..=+..... . ........-++..|+|.+.+.+|.++......+.+..+....+. ++.+|+++|||+
T Consensus 85 g~~~~~~~~lf~a~~~~~~-~-~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~g--v~gtPtfvvnG~ 160 (191)
T 3l9s_A 85 GVEDKVTVPLFEAVQKTQT-V-QSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADLQ--LQGVPAMFVNGK 160 (191)
T ss_dssp TCHHHHHHHHHHHHHTSCC-C-SSHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHTT--CCSSSEEEETTT
T ss_pred CcHHHHHHHHHHHHHhcCC-C-CCHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHhC--CcccCEEEECCE
Confidence 11011111 1111111111 2 23455678899999999999999999888888888777777664 899999999999
Q ss_pred ec
Q 025043 190 AL 191 (258)
Q Consensus 190 ~~ 191 (258)
+.
T Consensus 161 ~~ 162 (191)
T 3l9s_A 161 YQ 162 (191)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 14
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=97.61 E-value=0.00033 Score=58.74 Aligned_cols=151 Identities=16% Similarity=0.182 Sum_probs=89.6
Q ss_pred CeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC-eeEEEEEEEeeeeEeCCC-------------------CceeecC-
Q 025043 34 QKVKLSLYYESLCPYCANFIENQLVKVFNTDLST-IVNLRLVPYGNAQIRGPD-------------------KTIICQH- 92 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~-ivdl~lVPyGnA~~~~~~-------------------~~f~CQH- 92 (258)
++++|++|+.-.||.|..+ .++.+.+.. +.+ -++|+++||+-....... .++.-..
T Consensus 6 ~~~~I~~f~D~~CP~C~~~--~~~~~~l~~-~~~~~v~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~a~~~g~~~~~~ 82 (216)
T 2in3_A 6 EKPVLWYIADPMCSWCWGF--APVIENIRQ-EYSAFLTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFE 82 (216)
T ss_dssp CCCEEEEEECTTCHHHHHH--HHHHHHHHH-HHTTTCEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCT
T ss_pred cceeEEEEECCCCchhhcc--hHHHHHHHh-cCCCCeEEEEeecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCccChH
Confidence 3589999999999999833 455555542 222 488899998754321000 0000000
Q ss_pred --ChhhhccchHhHhHhhhC-Cc--chhhhhhhhhhccc----cCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHH
Q 025043 93 --GQNECYLNTIHACAINAW-PD--VRIHFKLIQCIEGQ----ASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKL 163 (258)
Q Consensus 93 --G~~EC~gN~iqaCai~~~-~~--~~~~l~fI~Cm~~~----~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~L 163 (258)
-+..=..|...++.+-.. .. ....++|..=+... ...+ +........++..|+|.+.+.+|.++.+....
T Consensus 83 ~~~~~~~~~~s~~a~r~~~~a~~~~~~~~~~~~~~lf~a~~~~~~~~-~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~ 161 (216)
T 2in3_A 83 NALPEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAFYVGQEDV-AQLAILKKLAVDLGIPESRFTPVFQSDEAKQR 161 (216)
T ss_dssp TCSCTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTTCCCT-TSHHHHHHHHHHTTCCHHHHHHHHHSHHHHHH
T ss_pred HHccCCcccCcHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHcCCCHHHHHHHhcchHHHHH
Confidence 011112344444322111 11 14456665555431 1112 23455678899999999999999999888888
Q ss_pred HHHHHHHhccCCCCCceeeEEEE--CCee
Q 025043 164 TLKYAEETDSLKPPHRFVPWVTV--NNQA 190 (258)
Q Consensus 164 l~~~~~~T~~l~P~~~~VPwI~i--NG~~ 190 (258)
+.+..+....+ .+..+||++| ||++
T Consensus 162 v~~~~~~a~~~--gv~g~Pt~~i~~~G~~ 188 (216)
T 2in3_A 162 TLAGFQRVAQW--GISGFPALVVESGTDR 188 (216)
T ss_dssp HHHHHHHHHHT--TCCSSSEEEEEETTEE
T ss_pred HHHHHHHHHHc--CCcccceEEEEECCEE
Confidence 77777766665 4899999998 9986
No 15
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=97.55 E-value=0.00064 Score=57.04 Aligned_cols=138 Identities=11% Similarity=0.116 Sum_probs=83.9
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhC--
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAW-- 110 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~-- 110 (258)
..+|.|.+|..=.||+|++|- ..+.+.++....+.|.|.+.+|--. -|... -....+++...
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~-~~~~~~l~~~~~g~v~~v~r~~p~~-----------~h~~s----~~aaraa~aa~~~ 76 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAF-FKLDDLLAQAGEDNVTVRIRLQSQP-----------WHMFS----GVIVRCILAAATL 76 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHH-TTHHHHHHHHCTTTEEEEEEECCCT-----------TSTTH----HHHHHHHHHHTTS
T ss_pred CCCEEEEEEECCCCHhHHHHH-HHHHHHHHHhCCCCEEEEEEEcCCC-----------CCccH----HHHHHHHHHHHHh
Confidence 678999999999999999995 4677776532245566655554110 02111 01122222211
Q ss_pred -CcchhhhhhhhhhccccCCC-----------C-CchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCC
Q 025043 111 -PDVRIHFKLIQCIEGQASAS-----------E-QPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPP 177 (258)
Q Consensus 111 -~~~~~~l~fI~Cm~~~~~~~-----------~-~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~ 177 (258)
+...++++|..-+...-... + +.......-++..|+|.+.+ .++.+-..-+.+..+....+ .
T Consensus 77 ~~~~~~f~~~~~aLf~~q~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~---l~~~~~~~~v~~~~~~a~~~--G 151 (182)
T 3gn3_A 77 EGGKESAKAVMTAVASHREEFEFEHHAGGPNLDATPNDIIARIERYSGLALAEA---FANPELEHAVKWHTKYARQN--G 151 (182)
T ss_dssp TTHHHHHHHHHHHHHHTGGGGSCBTTTBSGGGGCCHHHHHHHHHHHHTCCCHHH---HHCGGGHHHHHHHHHHHHHH--T
T ss_pred ccChHHHHHHHHHHHhcCcccccccccccccCCCCHHHHHHHHHHHhCCCHHHH---hcChHHHHHHHHHHHHHHHC--C
Confidence 12256788888776321111 0 22344567888899998876 45555555555555554444 4
Q ss_pred CceeeEEEECCeec
Q 025043 178 HRFVPWVTVNNQAL 191 (258)
Q Consensus 178 ~~~VPwI~iNG~~~ 191 (258)
++-+|+++|||+..
T Consensus 152 V~gtPtf~ing~~~ 165 (182)
T 3gn3_A 152 IHVSPTFMINGLVQ 165 (182)
T ss_dssp CCSSSEEEETTEEC
T ss_pred CCccCEEEECCEEc
Confidence 88999999999986
No 16
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=97.51 E-value=0.00061 Score=57.15 Aligned_cols=160 Identities=11% Similarity=0.065 Sum_probs=97.1
Q ss_pred eEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEE---eeeeEeC--CCC----------------------ce
Q 025043 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPY---GNAQIRG--PDK----------------------TI 88 (258)
Q Consensus 36 V~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPy---GnA~~~~--~~~----------------------~f 88 (258)
++|++|+.-.||+|..+. ..|..+.. ... ++|++.|| |...... ... ++
T Consensus 1 m~I~~~~D~~CP~cy~~~-~~l~~~~~-~~~--~~v~~~p~~L~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~a~~~G~ 76 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLAN-QRLSKLAQ-DYG--LTIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGI 76 (203)
T ss_dssp CEEEEEECTTCHHHHHHH-HHHHHHHH-HHC--CEEEEEECCHHHHHHHHTCCSCCGGGCHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCCCHHHHHHH-HHHHHHHH-HcC--CeEEEEeeecchhhHhhCCCCcccccChHHHHHHHHHHHHHHHHcCC
Confidence 479999999999998774 45555543 222 67788887 2211000 000 01
Q ss_pred eecCChhhhccchHhHhHhhhC-Ccchhhhhhhhhhccc----cCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHH
Q 025043 89 ICQHGQNECYLNTIHACAINAW-PDVRIHFKLIQCIEGQ----ASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKL 163 (258)
Q Consensus 89 ~CQHG~~EC~gN~iqaCai~~~-~~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~L 163 (258)
.-.. +. ..|...++.+-.. ....+.++|..=+... ...+ +........++..|+|.+.+.+|.++.+....
T Consensus 77 ~~~~-~~--~~~t~~a~r~~~~a~~~g~~~~~~~~lf~a~~~~~~~i-~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~ 152 (203)
T 2imf_A 77 PLVF-PA--NYNSRRMNIGFYYSGAEAQAAAYVNVVFNAVWGEGIAP-DLESLPALVSEKLGWDRSAFEHFLSSNAATER 152 (203)
T ss_dssp CCCC-CS--CCCCHHHHHHGGGCCSHHHHHHHHHHHHHHHHHSCCCT-TCTTHHHHHHHHHTCCHHHHHHHHHSHHHHHH
T ss_pred CCCC-CC--CCChHHHHHHHHHHhCcChHHHHHHHHHHHHHcCCCCC-CCHHHHHHHHHHcCCCHHHHHHHhcCHHHHHH
Confidence 1111 11 4566555543332 2334455665554421 1112 23345668899999999999999999888888
Q ss_pred HHHHHHHhccCCCCCceeeEEEECCeecH--HHHhHHHHHHHHh
Q 025043 164 TLKYAEETDSLKPPHRFVPWVTVNNQALE--EAFQNFIAYVCKA 205 (258)
Q Consensus 164 l~~~~~~T~~l~P~~~~VPwI~iNG~~~~--~a~~nL~~~VC~~ 205 (258)
+.+..+....+ .+..+||++|||+... +....|.+.+-+.
T Consensus 153 v~~~~~~a~~~--Gv~G~Ptfvi~g~~~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 153 YDEQTHAAIER--KVFGVPTMFLGDEMWWGNDRLFMLESAMGRL 194 (203)
T ss_dssp HHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHC--CCCcCCEEEECCEEEECCCCHHHHHHHHhcc
Confidence 87777766665 5899999999998652 3445566555443
No 17
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.32 E-value=0.00076 Score=54.74 Aligned_cols=141 Identities=15% Similarity=0.245 Sum_probs=76.1
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcC--CCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhh
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDL--STIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINA 109 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l--~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~ 109 (258)
...+|.|.+|+.-.||+|++|.. .|.+.++ ++ .+-|.|.++||.-.. .. +. .++..+.|+.
T Consensus 25 ~~a~v~i~~f~D~~Cp~C~~~~~-~~~~~~~-~~~~~~~v~~~~~~~~~~~---~~------~~----~a~~~~~~~~-- 87 (175)
T 1z6m_A 25 SNAPVKMIEFINVRCPYCRKWFE-ESEELLA-QSVKSGKVERIIKLFDKEK---ES------LQ----RGNVMHHYID-- 87 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHHHTTSEEEEEEECCCCS---TT------TH----HHHHHHTTCC--
T ss_pred CCCCeEEEEEECCCCcchHHHHH-HHHHHHH-HHhhCCcEEEEEEeCCCCc---cc------HH----HHHHHHHHHH--
Confidence 46789999999999999999964 5666664 34 456788887774211 00 00 1222232321
Q ss_pred CCcchhhhhhhhhhcccc---CCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEE
Q 025043 110 WPDVRIHFKLIQCIEGQA---SASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTV 186 (258)
Q Consensus 110 ~~~~~~~l~fI~Cm~~~~---~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~i 186 (258)
..+..+.+.|..=+.... ... ......+..++..|+|.+. ...++.+..+....+ .+..+|+++|
T Consensus 88 ~~~~~~~~~~~~~lf~~~~~~~~~-~~~~l~~~a~~~~Gld~~~---------~~~~~~~~~~~a~~~--gv~gtPt~vv 155 (175)
T 1z6m_A 88 YSAPEQALSALHKMFATQDEWGNL-TLEEVATYAEKNLGLKEQK---------DATLVSAVIAEANAA--HIQFVPTIII 155 (175)
T ss_dssp TTCHHHHHHHHHHHHHTHHHHTTS-CHHHHHHHHHHTSCCCCCC---------CHHHHHHHHHHHHHH--TCCSSCEEEE
T ss_pred hcChHHHHHHHHHHHHcChhhccC-CHHHHHHHHHHhcCCCccc---------CHHHHHHHHHHHHHc--CCCCcCeEEE
Confidence 123445556655444211 001 1122222334567887651 123333343444443 4889999999
Q ss_pred CCeecH--HHHhHHHHH
Q 025043 187 NNQALE--EAFQNFIAY 201 (258)
Q Consensus 187 NG~~~~--~a~~nL~~~ 201 (258)
||+... ...+.|.+.
T Consensus 156 ng~~~~G~~~~~~l~~~ 172 (175)
T 1z6m_A 156 GEYIFDESVTEEELRGY 172 (175)
T ss_dssp TTEEECTTCCHHHHHHH
T ss_pred CCEEccCCCCHHHHHHH
Confidence 999763 123445543
No 18
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.22 E-value=0.00045 Score=56.69 Aligned_cols=54 Identities=17% Similarity=0.094 Sum_probs=42.4
Q ss_pred HHHHHH----HHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCee
Q 025043 135 AAWRKC----CNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQA 190 (258)
Q Consensus 135 ~~~~~C----a~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~ 190 (258)
...... ++..|+|.+.+.+|.++.+....+.+..+....+ .+..+||++|||++
T Consensus 115 ~~l~~~~~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~ing~~ 172 (195)
T 3c7m_A 115 KDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLEKWKASYDVA--KIQGVPAYVVNGKY 172 (195)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHGGGHHHHH--HHHCSSEEEETTTE
T ss_pred HHHHHHHHhHHHHcCCCHHHHHHHHcChHHHHHHHHHHHHHHHc--CCCccCEEEECCEE
Confidence 345678 8899999999999999887777776655544444 37899999999986
No 19
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=97.16 E-value=0.0026 Score=53.48 Aligned_cols=147 Identities=14% Similarity=0.138 Sum_probs=88.5
Q ss_pred eEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCC-------------------CceeecCChh-
Q 025043 36 VKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPD-------------------KTIICQHGQN- 95 (258)
Q Consensus 36 V~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~-------------------~~f~CQHG~~- 95 (258)
++|++|+.-.||.|-.+ ...|..+.+ .+.+-++|++.|||-....... .++.-.....
T Consensus 3 ~~I~~~~D~~CP~cy~~-~~~l~~l~~-~~~~~v~v~~~p~~L~~~~~~~~~~~~~~~~~~~~~r~a~~~G~~f~~~~~~ 80 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGY-KPTIEKLKQ-QLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWK 80 (208)
T ss_dssp EEEEEEECTTCHHHHHH-HHHHHHHHH-HSCTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred eEEEEEECCCCchhhhh-hHHHHHHHH-hCCCCceEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCcccHHHHh
Confidence 68999999999999855 344555543 4556799999998743211000 0000111000
Q ss_pred --hhccchHhHhHhhhC-Ccchhhhhhhhhhcc----ccCCCCCchHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHH
Q 025043 96 --ECYLNTIHACAINAW-PDVRIHFKLIQCIEG----QASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYA 168 (258)
Q Consensus 96 --EC~gN~iqaCai~~~-~~~~~~l~fI~Cm~~----~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~ 168 (258)
.=..|...++-+-.. .......+|..=+.. ....+ +........++..|+|.+.+.+|.++.+....+.+..
T Consensus 81 ~~~~~~~s~~a~r~~~aa~~~g~~~~~~~~l~~a~~~~~~~~-~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~ 159 (208)
T 3kzq_A 81 LCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPP-HEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQL 159 (208)
T ss_dssp HSCCBCCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTSCCCT-TCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCC-CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHH
Confidence 001233344322111 112223455444432 11122 3445567889999999999999999988888888887
Q ss_pred HHhccCCCCCceeeEEEEC
Q 025043 169 EETDSLKPPHRFVPWVTVN 187 (258)
Q Consensus 169 ~~T~~l~P~~~~VPwI~iN 187 (258)
+....+ .+..+||++||
T Consensus 160 ~~a~~~--gv~g~Pt~~v~ 176 (208)
T 3kzq_A 160 SLAKSL--GVNSYPSLVLQ 176 (208)
T ss_dssp HHHHHT--TCCSSSEEEEE
T ss_pred HHHHHc--CCCcccEEEEE
Confidence 777766 48999999995
No 20
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=96.96 E-value=0.0062 Score=52.98 Aligned_cols=168 Identities=9% Similarity=0.101 Sum_probs=103.6
Q ss_pred eeEEEEEEEeCChhhHHHHHHhhHHHHHhcCC--CeeEEEEEEEeee-eEe-CCC-------------------------
Q 025043 35 KVKLSLYYESLCPYCANFIENQLVKVFNTDLS--TIVNLRLVPYGNA-QIR-GPD------------------------- 85 (258)
Q Consensus 35 kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--~ivdl~lVPyGnA-~~~-~~~------------------------- 85 (258)
|++|++|+.-.||.|--. ...|..+.. .+. .-++|++.||.=. ... .++
T Consensus 2 ~~~I~~~~D~~cPwcyig-~~~l~~a~~-~~~~~~~v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~ 79 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVG-KARFEKALA-AFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNL 79 (239)
T ss_dssp CEEEEEEECSSCHHHHHH-HHHHHHHHH-TCTTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CeEEEEEEeCcCHhHHHH-HHHHHHHHH-hcCccCceEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHH
Confidence 689999999999999544 345555554 343 4699999999421 100 000
Q ss_pred ------CceeecCChhhhccchHhHhHhhhC-Ccchhhhhhhhhhccc----cCCCCCc-hHHHHHHHHHcCCCchhhhh
Q 025043 86 ------KTIICQHGQNECYLNTIHACAINAW-PDVRIHFKLIQCIEGQ----ASASEQP-EAAWRKCCNDLGFSQQPIDN 153 (258)
Q Consensus 86 ------~~f~CQHG~~EC~gN~iqaCai~~~-~~~~~~l~fI~Cm~~~----~~~~~~~-~~~~~~Ca~~~gld~~~I~~ 153 (258)
.++.=...+ -=..|...++-+-+. ........|+.=+... ...+ +. .......+...|+|.+.+.+
T Consensus 80 ~r~a~~~Gl~f~~~~-~~~~nt~~a~r~~~~A~~~g~~~~~~~alf~a~~~~g~~i-~d~~~~L~~~a~~~Gld~~~~~~ 157 (239)
T 3gl5_A 80 GAQAAAEGLAYRTRD-RDHGSTFDLHRLLHLAKERGRHEALLDAFYRGNFADERSV-FNDDERLVELAVGAGLDAEEVRA 157 (239)
T ss_dssp HHHHHHTTCCCCCSS-CEECCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCSSCC-SSCHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHcCCCccCCC-CCCCChHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHcCCCHHHHHH
Confidence 011111111 013466665533222 1223445554444321 1122 23 45677889999999999999
Q ss_pred hccC-CchHHHHHHHHHHhccCCCCCceeeEEEECCeec--H-HHHhHHHHHHHHhhcC
Q 025043 154 CYQS-GEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQAL--E-EAFQNFIAYVCKAYKG 208 (258)
Q Consensus 154 C~~s-~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~--~-~a~~nL~~~VC~~y~g 208 (258)
|.++ .+..+.+.+..++...+ .+.-|||++|||++. + +..+.|.+.+=+....
T Consensus 158 ~l~s~~~~~~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 158 VLADPAAYADEVRADEREAAQL--GATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHCTTTTHHHHHHHHHHHHHT--TCCSSSEEEETTTEEEESSCCHHHHHHHHHHHHHT
T ss_pred HHcCcHhHHHHHHHHHHHHHHC--CCCeeCeEEECCcEeecCCCCHHHHHHHHHHHHhh
Confidence 9999 88888888877777665 489999999999852 1 3355677777666654
No 21
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=96.29 E-value=0.0098 Score=50.66 Aligned_cols=75 Identities=8% Similarity=-0.007 Sum_probs=54.8
Q ss_pred chHHHHHHHHHcCCCc---hhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEEC----CeecH--HHHhHHHHHHH
Q 025043 133 PEAAWRKCCNDLGFSQ---QPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVN----NQALE--EAFQNFIAYVC 203 (258)
Q Consensus 133 ~~~~~~~Ca~~~gld~---~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN----G~~~~--~a~~nL~~~VC 203 (258)
........+...|+|. +.+.+|.++.+....+.+..++...+ .+..|||++|| |+... +....|...+=
T Consensus 134 ~~~~L~~~a~~~Gl~~~d~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~G~Ptfvv~~~g~~~~~~G~~~~~~l~~~l~ 211 (226)
T 1r4w_A 134 ESQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKY--GAFGLPTTVAHVDGKTYMLFGSDRMELLAYLLG 211 (226)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHT--TCCSSCEEEEEETTEEEEEESTTCHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCchhHHHHHHHcCCHHHHHHHHHHHHHHHHC--CCCCCCEEEEeCCCCcCceeCCCcHHHHHHHhc
Confidence 3455678899999964 47788888988888887777776665 48999999999 66542 33556666666
Q ss_pred HhhcCC
Q 025043 204 KAYKGK 209 (258)
Q Consensus 204 ~~y~g~ 209 (258)
..+.|+
T Consensus 212 ~~~~~~ 217 (226)
T 1r4w_A 212 EKWMGP 217 (226)
T ss_dssp CCCCCS
T ss_pred CcccCC
Confidence 666664
No 22
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.01 E-value=0.013 Score=48.68 Aligned_cols=135 Identities=10% Similarity=0.083 Sum_probs=76.0
Q ss_pred CeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEeeeeEeCCCCceeecCChhhhccchHhHhHhhhCCcc
Q 025043 34 QKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYGNAQIRGPDKTIICQHGQNECYLNTIHACAINAWPDV 113 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyGnA~~~~~~~~f~CQHG~~EC~gN~iqaCai~~~~~~ 113 (258)
+++.|..|+--.||.|++|- ...+-|..++ + +.|+.+|.-- |+..+ ..-+.-.++-.....
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~--~~~~~~~~~~-~-v~~~~~p~~~-------------~~~~~-~aa~a~~Aa~~q~g~- 82 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNME--NFLPVISQEA-G-TDIGKMHITF-------------NQSAH-IASMFYYAAEMQVDG- 82 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHG--GGHHHHHHHH-T-SCCEEEECCS-------------SSHHH-HHHHHHHHHHTTSSS-
T ss_pred CCCEEEEEECCCChhHHHhh--HHHHHHHHHh-C-CeEEEEeccC-------------Cccch-HHHHHHHHHHHHhCC-
Confidence 57889999999999999994 3444443233 3 4555555421 11111 011111222211111
Q ss_pred hhhhhhhhhhccccC--CC---CCchHHHHHHHHHcCC-CchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEEC
Q 025043 114 RIHFKLIQCIEGQAS--AS---EQPEAAWRKCCNDLGF-SQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVN 187 (258)
Q Consensus 114 ~~~l~fI~Cm~~~~~--~~---~~~~~~~~~Ca~~~gl-d~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN 187 (258)
...++|..=+..... .. ..........+...|+ |.+.+.++.++ .....+.+..+....+. ++.+|+++||
T Consensus 83 ~~~~~~~~~lf~a~~~~~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~-~~~~~v~~~~~~a~~~g--v~GtPtfvvn 159 (185)
T 3feu_A 83 APDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRD-TLIKKVDNAKMLSEKSG--ISSVPTFVVN 159 (185)
T ss_dssp SCCHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHT--CCSSSEEEET
T ss_pred chHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHcC--CCccCEEEEC
Confidence 012233333221100 00 0123446678999998 99999999876 55556666666666654 8999999999
Q ss_pred Cee
Q 025043 188 NQA 190 (258)
Q Consensus 188 G~~ 190 (258)
|++
T Consensus 160 g~~ 162 (185)
T 3feu_A 160 GKY 162 (185)
T ss_dssp TTE
T ss_pred CEE
Confidence 997
No 23
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=95.81 E-value=0.088 Score=45.35 Aligned_cols=169 Identities=13% Similarity=0.070 Sum_probs=94.8
Q ss_pred CeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEE--ee-eeEe--CCCC--------------------ce
Q 025043 34 QKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPY--GN-AQIR--GPDK--------------------TI 88 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPy--Gn-A~~~--~~~~--------------------~f 88 (258)
.+.+|++|+.-.||.|--.. ..|..+.. . . -++|++.|| |. .... .... ++
T Consensus 4 ~~~~I~~~~D~~CPwcyi~~-~~L~~~~~-~-~-~v~v~~~p~~L~~~~~~~g~~~~~~~~~k~~y~~~~~~r~a~~~G~ 79 (234)
T 3rpp_A 4 LPRTVELFYDVLSPYSWLGF-EILCRYQN-I-W-NINLQLRPSLITGIMKDSGNKPPGLLPRKGLYMANDLKLLRHHLQI 79 (234)
T ss_dssp CCEEEEEEECTTCHHHHHHH-HHHHHHTT-T-S-SEEEEEEECCHHHHCC----CCCSSSCHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEEeCCCHHHHHHH-HHHHHHHH-H-c-CCeEEEEEeecchhhhhcCCCCcccChHHHHHHHHHHHHHHHHhCC
Confidence 46789999999999995442 23333322 1 2 388999998 31 1100 0000 01
Q ss_pred eecCCh--hh--hccchHhHhHhhhCC---cchhhhhhhhhhcc----ccCCCCCchHHHHHHHHHcCCCc---hhhhhh
Q 025043 89 ICQHGQ--NE--CYLNTIHACAINAWP---DVRIHFKLIQCIEG----QASASEQPEAAWRKCCNDLGFSQ---QPIDNC 154 (258)
Q Consensus 89 ~CQHG~--~E--C~gN~iqaCai~~~~---~~~~~l~fI~Cm~~----~~~~~~~~~~~~~~Ca~~~gld~---~~I~~C 154 (258)
.-...+ .. -..|...++-+-..- .......|+.=+.. ....+ +........+.+.|+|. +.+.+-
T Consensus 80 ~f~~~~~~~~~~~~~nt~~a~r~~~aa~~~~~~~~~~~~~al~~A~~~~g~di-~d~~~L~~~a~~~GLd~~~~~~~l~~ 158 (234)
T 3rpp_A 80 PIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDI-TEPQSILAAAEKAGMSAEQAQGLLEK 158 (234)
T ss_dssp CCCCCSSCHHHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCC-SSHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred CCCCCCCCcccccCCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCCC-CCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 111110 00 011555554332211 12334455444331 11222 34566778999999999 455566
Q ss_pred ccCCchHHHHHHHHHHhccCCCCCceeeEEEEC--Ce-ec--H-HHHhHHHHHHHHhhcCC
Q 025043 155 YQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVN--NQ-AL--E-EAFQNFIAYVCKAYKGK 209 (258)
Q Consensus 155 ~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN--G~-~~--~-~a~~nL~~~VC~~y~g~ 209 (258)
.++.+.++.+.+..++...+ .+..|||++|| |+ .. + +.+..|...+=+.+.|+
T Consensus 159 ~~s~~~~~~l~~~~~~a~~~--Gv~GvPtfvv~~~g~~~~f~G~drl~~l~~~L~~~~~~p 217 (234)
T 3rpp_A 159 IATPKVKNQLKETTEAACRY--GAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGP 217 (234)
T ss_dssp TTSHHHHHHHHHHHHHHHHT--TCSSSCEEEEEETTEEEEEESSSCHHHHHHHHTCCCCCS
T ss_pred ccCHHHHHHHHHHHHHHHHc--CCCCCCEEEEeCCCCcCceeCccCHHHHHHHhccccCCC
Confidence 68888888888887777776 58999999995 75 22 2 34555666665566665
No 24
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=95.18 E-value=0.029 Score=46.99 Aligned_cols=161 Identities=9% Similarity=0.087 Sum_probs=95.4
Q ss_pred CeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEE--eeeeEeCCCC-----------------------ce
Q 025043 34 QKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPY--GNAQIRGPDK-----------------------TI 88 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPy--GnA~~~~~~~-----------------------~f 88 (258)
.+++|++|+.-.||.|--.. ..|..+.. .. -++|++.|| |......++. ++
T Consensus 3 ~~~~I~~~~D~~cPwcyi~~-~~l~~~~~-~~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~k~~~~~~~~~r~a~~~G~ 78 (202)
T 3fz5_A 3 AMNPIEFWFDFSSGYAFFAA-QRIEALAA-EL--GRTVLWRPYMLGAAFSVTGARGLSSTPLKRDYAQRDWARIARQRGL 78 (202)
T ss_dssp CCSCEEEEECTTCHHHHHHH-TTHHHHHH-HH--TCCEEEEECTTC----------CCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCceeEEEEeCCCHHHHHHH-HHHHHHHH-Hh--CCeEEEEeeeccchhhhcCCCCcccCcHHHHHHHHHHHHHHHHhCC
Confidence 35689999999999995542 34444443 21 378888887 3221110100 01
Q ss_pred eecCChhhhccchHhHhHhhhCC---cchhhhhhhhhhccc----cCCCCCchHHHHHHHHHcCCCchhhhhhccCCchH
Q 025043 89 ICQHGQNECYLNTIHACAINAWP---DVRIHFKLIQCIEGQ----ASASEQPEAAWRKCCNDLGFSQQPIDNCYQSGEGT 161 (258)
Q Consensus 89 ~CQHG~~EC~gN~iqaCai~~~~---~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~ 161 (258)
.-.. +..=..|...++-+-+.- ...+...|+.=+... ...+ +........+...|+|.+.+.++.++.+..
T Consensus 79 ~f~~-~~~~~~~t~~a~r~~~~a~~~g~~~~~~~~~alf~a~~~~g~~i-~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~ 156 (202)
T 3fz5_A 79 TFRP-PADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLYFSDRLDT-ASPEAVSRLGPEVGLEPEALLAGIADPALK 156 (202)
T ss_dssp CCCC-CTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCCCT-TCHHHHHTTHHHHTCCHHHHHHHTTCHHHH
T ss_pred CCCC-CCCCCCChHHHHHHHHHHHhhCchHHHHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHcCCCHHHHHHHhcCHHHH
Confidence 1111 111123666655332221 112455665554421 1112 344566788999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCceeeEEEECCeecH--HHHhHHHHHH
Q 025043 162 KLTLKYAEETDSLKPPHRFVPWVTVNNQALE--EAFQNFIAYV 202 (258)
Q Consensus 162 ~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~--~a~~nL~~~V 202 (258)
+.+.+..++...+ .+..|||++|||+... +.+..|...+
T Consensus 157 ~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~~G~~~~~~l~~~l 197 (202)
T 3fz5_A 157 ETVRKIGEDAVAR--GIFGSPFFLVDDEPFWGWDRMEMMAEWI 197 (202)
T ss_dssp HHHHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCCcCCEEEECCEEEecCCCHHHHHHHH
Confidence 8888888777766 4899999999999752 3344555544
No 25
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=94.70 E-value=0.034 Score=46.89 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=47.6
Q ss_pred chHHHHHHHHHcCCCchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCeec
Q 025043 133 PEAAWRKCCNDLGFSQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQAL 191 (258)
Q Consensus 133 ~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 191 (258)
........+...|+|.+.+.+|.++......+.+..+....+. ++.||+++|||++.
T Consensus 5 d~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~g--i~gvP~fvingk~~ 61 (197)
T 1un2_A 5 SASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQ--LRGVPAMFVNGKYQ 61 (197)
T ss_dssp SHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHTT--CCSSSEEEETTTEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcC--CCcCCEEEEcceEe
Confidence 3455678899999999999999999988888888777766654 78899999999975
No 26
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=85.10 E-value=1.3 Score=37.97 Aligned_cols=42 Identities=29% Similarity=0.571 Sum_probs=32.8
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEe
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYG 77 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyG 77 (258)
...++.|.+|..-.||+|++|.. +|.+..+ . +.|.|.++||+
T Consensus 95 ~~ak~~v~~F~D~~Cp~C~~~~~-~l~~~~~-~--g~v~v~~~~~p 136 (241)
T 1v58_A 95 KDAPVIVYVFADPFCPYCKQFWQ-QARPWVD-S--GKVQLRTLLVG 136 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH-HHHHHHH-T--TSEEEEEEECC
T ss_pred CCCCeEEEEEECCCChhHHHHHH-HHHHHHh-C--CcEEEEEEECC
Confidence 35688999999999999999964 6777664 2 35778888874
No 27
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=80.34 E-value=2.4 Score=33.83 Aligned_cols=39 Identities=18% Similarity=0.496 Sum_probs=27.4
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEe
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYG 77 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyG 77 (258)
...++.|.+|..-.||+|++|- +.++ ++.+ +.|.++.|.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~-----~~l~-~l~~-v~v~~~~~P 50 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLE-----HEFE-KMTD-VTVYSFMMP 50 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHH-----HHHT-TCCS-EEEEEEECC
T ss_pred CCCCEEEEEEECCCChhHHHHH-----HHHh-hcCc-eEEEEEEcc
Confidence 3568999999999999999984 3343 4543 555555443
No 28
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=78.77 E-value=2 Score=38.49 Aligned_cols=40 Identities=20% Similarity=0.477 Sum_probs=32.0
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEe
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYG 77 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyG 77 (258)
...+..|.+|..-.||+|+++. .+|.+.++ + ++|++++|+
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~-~~l~~~l~-~----~~Vr~i~~P 184 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKEL-TKLRDHLK-E----NTVRMVVVG 184 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHH-HTHHHHHH-H----CEEEEEECC
T ss_pred CCCCeEEEEEECcCChhHHHHH-HHHHHHhh-C----CcEEEEEee
Confidence 3567899999999999999995 56777664 2 778888875
No 29
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=67.60 E-value=6.9 Score=32.51 Aligned_cols=41 Identities=20% Similarity=0.457 Sum_probs=29.5
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEe
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYG 77 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyG 77 (258)
...++.|.+|+...||+|++|. ..|.++.+ . + +.|.++.|.
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~-~~l~~~~~-~--~-v~v~~~~~p 124 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLH-QQLKEYND-L--G-ITVRYLAFP 124 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-TTHHHHHH-T--T-EEEEEEECC
T ss_pred CCCCEEEEEEECCCCHhHHHHH-HHHHHHHh-C--C-cEEEEEECC
Confidence 3678999999999999999995 35555332 1 3 677666553
No 30
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=63.89 E-value=13 Score=25.39 Aligned_cols=16 Identities=25% Similarity=0.835 Sum_probs=14.5
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.+|+-+-||+|++.
T Consensus 3 ~~~~f~~~~C~~C~~~ 18 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSA 18 (80)
T ss_dssp EEEEEEECSCHHHHHH
T ss_pred ceEEEeCCCCCchHHH
Confidence 5899999999999877
No 31
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=61.68 E-value=8.2 Score=25.93 Aligned_cols=26 Identities=31% Similarity=0.622 Sum_probs=19.8
Q ss_pred eeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 35 KVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 35 kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
.+.|.+||-+-||.|+++.. .|..+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~-~l~~~~ 28 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKR-VVEEVA 28 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHH-HHHHHH
T ss_pred ceEEEEEeCCCCCchHHHHH-HHHHHH
Confidence 57899999999999998843 344443
No 32
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=58.42 E-value=12 Score=30.97 Aligned_cols=40 Identities=18% Similarity=0.440 Sum_probs=28.4
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEE
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPY 76 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPy 76 (258)
...++.|.+|+-.-||+|+++.. .|..+.+ . -+.|.++.|
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~-~l~~l~~-~---~v~v~~~~~ 123 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHE-QMADYNA-L---GITVRYLAF 123 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHT-THHHHHH-T---TEEEEEEEC
T ss_pred CCCCEEEEEEECCCCHHHHHHHH-HHHHHHh-C---CcEEEEEEC
Confidence 35789999999999999999953 4555432 1 266666554
No 33
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=50.84 E-value=6.2 Score=27.14 Aligned_cols=17 Identities=35% Similarity=0.880 Sum_probs=15.1
Q ss_pred eEEEEEEEeCChhhHHH
Q 025043 36 VKLSLYYESLCPYCANF 52 (258)
Q Consensus 36 V~V~vYyESlCPd~~~F 52 (258)
..|.||.-+.||+|++.
T Consensus 4 m~v~ly~~~~Cp~C~~~ 20 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWA 20 (89)
T ss_dssp CCEEEEECTTCHHHHHH
T ss_pred eEEEEEEcCCChhHHHH
Confidence 56899999999999886
No 34
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=45.71 E-value=23 Score=25.59 Aligned_cols=26 Identities=23% Similarity=0.539 Sum_probs=19.9
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
......|.+|+-.-||.|++. .|.++
T Consensus 13 ~~~~~~v~~f~~~~C~~C~~~-----~~~L~ 38 (100)
T 1wjk_A 13 NRALPVLTLFTKAPCPLCDEA-----KEVLQ 38 (100)
T ss_dssp CCCCCEEEEEECSSCHHHHHH-----HHHTS
T ss_pred cCCCCEEEEEeCCCCcchHHH-----HHHHH
Confidence 455668999999999999765 55554
No 35
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=45.51 E-value=9.2 Score=28.03 Aligned_cols=21 Identities=29% Similarity=0.705 Sum_probs=17.9
Q ss_pred cCCeeEEEEEEEeCChhhHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANF 52 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~F 52 (258)
...+.+|.||.-+-||+|++.
T Consensus 12 ~~~~~~v~vy~~~~Cp~C~~a 32 (99)
T 3qmx_A 12 SAVSAKIEIYTWSTCPFCMRA 32 (99)
T ss_dssp SCCCCCEEEEECTTCHHHHHH
T ss_pred ccCCCCEEEEEcCCChhHHHH
Confidence 455668999999999999887
No 36
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=44.12 E-value=42 Score=23.09 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=22.8
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..+..|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 50 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAP-VLEELAA-DYEG 50 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHH-HHHHHHH-HTTT
T ss_pred cCCcEEEEEECCCCHHHHHHhH-HHHHHHH-HhcC
Confidence 5677788888999999999843 4444443 4444
No 37
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=42.91 E-value=11 Score=26.35 Aligned_cols=15 Identities=27% Similarity=0.509 Sum_probs=12.2
Q ss_pred EEEEEEe----CChhhHHH
Q 025043 38 LSLYYES----LCPYCANF 52 (258)
Q Consensus 38 V~vYyES----lCPd~~~F 52 (258)
|.||.-+ .||+|++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~a 20 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNA 20 (87)
T ss_dssp EEEEECCTTTSCCHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHH
Confidence 6788888 88888776
No 38
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.87 E-value=15 Score=27.44 Aligned_cols=17 Identities=12% Similarity=0.215 Sum_probs=14.9
Q ss_pred eeEEEEEEEeCChhhHH
Q 025043 35 KVKLSLYYESLCPYCAN 51 (258)
Q Consensus 35 kV~V~vYyESlCPd~~~ 51 (258)
..+|.||.-+.||+|..
T Consensus 7 ~m~V~vy~~~~C~~C~~ 23 (111)
T 2ct6_A 7 GMVIRVFIASSSGFVAI 23 (111)
T ss_dssp CCCEEEEECSSCSCHHH
T ss_pred ccEEEEEEcCCCCCccc
Confidence 45799999999999984
No 39
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=42.51 E-value=50 Score=22.86 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=21.1
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+.+.. .|..+.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~-~l~~~~ 46 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAP-ILDEIA 46 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred hcCCeEEEEEECCCCHhHHHHHH-HHHHHH
Confidence 45677888899999999999843 344444
No 40
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=42.03 E-value=41 Score=23.51 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=23.4
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
...++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 56 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSP-LINLAAN-TYSD 56 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHH-HHHHHHH-HTTT
T ss_pred cCCceEEEEEECCCCHHHHHhHH-HHHHHHH-HhCC
Confidence 45677888899999999999853 3444433 3443
No 41
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=41.79 E-value=15 Score=28.19 Aligned_cols=16 Identities=25% Similarity=0.746 Sum_probs=14.4
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.||+-+-||+|++.
T Consensus 38 ~Vvvy~~~~Cp~C~~a 53 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKAT 53 (129)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCCCchHHH
Confidence 4889999999999977
No 42
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=40.43 E-value=49 Score=22.81 Aligned_cols=29 Identities=14% Similarity=0.257 Sum_probs=20.6
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..+++-|-.||-+-||.|+.+.. .|..+.
T Consensus 15 ~~~~~~~v~f~~~~C~~C~~~~~-~l~~~~ 43 (105)
T 1nsw_A 15 QGDGPVLVDFWAAWCGPCRMMAP-VLEEFA 43 (105)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred hCCCcEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 34567788889999999998853 344433
No 43
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=40.03 E-value=16 Score=29.92 Aligned_cols=12 Identities=17% Similarity=0.617 Sum_probs=6.4
Q ss_pred HHHHHHHcCCCc
Q 025043 137 WRKCCNDLGFSQ 148 (258)
Q Consensus 137 ~~~Ca~~~gld~ 148 (258)
+.+-++..|++.
T Consensus 69 ~~r~a~~~G~~f 80 (202)
T 3fz5_A 69 WARIARQRGLTF 80 (202)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHHHHHhCCCC
Confidence 345556666554
No 44
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=39.93 E-value=49 Score=22.65 Aligned_cols=33 Identities=12% Similarity=0.241 Sum_probs=22.6
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..+.-|-.||-+-||.|+.+.. .|..+.+ ++.+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 49 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAP-VIDELAK-EYSG 49 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCChHHHHHHH-HHHHHHH-HhcC
Confidence 4667788889999999999853 3444433 3443
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=39.67 E-value=51 Score=22.28 Aligned_cols=33 Identities=12% Similarity=0.359 Sum_probs=22.1
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 47 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAP-IIEELAE-DYPQ 47 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHH-HHHHHHH-HCTT
T ss_pred cCCcEEEEEECCCChhHHHHhH-HHHHHHH-HcCC
Confidence 4566788888999999999853 3444433 3444
No 46
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=39.44 E-value=49 Score=22.72 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=20.9
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~-~~~~~~ 46 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGP-ALGEIG 46 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred hCCCEEEEEEECCCChhHHHHhH-HHHHHH
Confidence 45677888888999999999853 344333
No 47
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=38.55 E-value=53 Score=22.50 Aligned_cols=28 Identities=14% Similarity=0.333 Sum_probs=20.2
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~-~l~~~~ 44 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAP-ILEEIA 44 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHhhH-HHHHHH
Confidence 4566777888999999999853 444444
No 48
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=38.50 E-value=14 Score=26.77 Aligned_cols=19 Identities=26% Similarity=0.557 Sum_probs=16.1
Q ss_pred CeeEEEEEEEeCChhhHHH
Q 025043 34 QKVKLSLYYESLCPYCANF 52 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~F 52 (258)
.+-+|.||+-+.||+|++.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~a 38 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKT 38 (103)
T ss_dssp CCSCEEEEECSSCHHHHHH
T ss_pred CCCeEEEEcCCCCchHHHH
Confidence 3456889999999999887
No 49
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=38.03 E-value=20 Score=26.81 Aligned_cols=22 Identities=27% Similarity=0.730 Sum_probs=17.5
Q ss_pred EEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 37 KLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 37 ~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
.|.+|+-+-||+|++. |.++++
T Consensus 26 ~Vvvf~~~~Cp~C~~a----lk~~L~ 47 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAA----LNTLFE 47 (118)
T ss_dssp SEEEEECSSCHHHHHH----HHHHHT
T ss_pred cEEEEEcCCCcCHHHH----HHHHHH
Confidence 4788999999999987 456654
No 50
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=37.90 E-value=31 Score=25.84 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=24.0
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRL 73 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~l 73 (258)
..++-|-.||-+-||.|+.+ .|.++ ++.+..++.+
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~-----~p~l~-~l~~~~~v~~ 73 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKI-----KEYFK-NQLNYYYVTL 73 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHT-----HHHHH-GGGGTEECEE
T ss_pred CCCEEEEEEECCCCHHHHHH-----HHHHH-HHHHhcCEEE
Confidence 35678888999999999986 56665 4544334333
No 51
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=37.78 E-value=11 Score=27.65 Aligned_cols=16 Identities=38% Similarity=0.947 Sum_probs=11.8
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
.|+||.-+.||+|.+.
T Consensus 5 ~I~vYs~~~Cp~C~~a 20 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRL 20 (92)
T ss_dssp CEEEEECTTCSSHHHH
T ss_pred cEEEEcCCCCHhHHHH
Confidence 4777888888888765
No 52
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=36.64 E-value=69 Score=21.89 Aligned_cols=28 Identities=21% Similarity=0.414 Sum_probs=20.9
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
.+++-|-.||-+-||.|+++.. .|..+.
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~ 46 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISP-KLVELS 46 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHhhH-HHHHHH
Confidence 5677788899999999999853 344443
No 53
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=36.52 E-value=37 Score=26.12 Aligned_cols=44 Identities=11% Similarity=0.084 Sum_probs=27.9
Q ss_pred HHHHcCC-CchhhhhhccCCchHHHHHHHHHHhccCCCCCceeeEEEECCeecH
Q 025043 140 CCNDLGF-SQQPIDNCYQSGEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALE 192 (258)
Q Consensus 140 Ca~~~gl-d~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 192 (258)
-++..|+ ++..+. -..+.++.....+.|.. .-||-|+|||++++
T Consensus 44 lL~~~gv~~~~~~~----v~~~~~~r~~l~~~sg~-----~TvPqIFI~g~~IG 88 (118)
T 2wul_A 44 ILRLHGVRDYAAYN----VLDDPELRQGIKDYSNW-----PTIPQVYLNGEFVG 88 (118)
T ss_dssp HHHHTTCCSCEEEE----TTSCHHHHHHHHHHHTC-----CSSCEEEETTEEEE
T ss_pred HHHHhCCcCeEeec----ccCCHHHHHHHHHhccC-----CCCCeEeECCEEEC
Confidence 3445565 444332 23455666666666653 46999999999984
No 54
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=36.24 E-value=15 Score=24.62 Aligned_cols=16 Identities=31% Similarity=0.982 Sum_probs=13.1
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.+|+-+.||+|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (82)
T 1fov_A 2 NVEIYTKETCPYCHRA 17 (82)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 3678888999999876
No 55
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=35.52 E-value=51 Score=24.97 Aligned_cols=38 Identities=13% Similarity=0.413 Sum_probs=27.2
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEE
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLV 74 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lV 74 (258)
...|+.|-.|+-+-||.|++.+ ..|..+.+ ++. +++++
T Consensus 35 ~~gk~~lv~F~~~~C~~C~~~~-~~l~~l~~-~~~---~v~vv 72 (165)
T 3ha9_A 35 VGGDVVILWFMAAWCPSCVYMA-DLLDRLTE-KYR---EISVI 72 (165)
T ss_dssp CCSSEEEEEEECTTCTTHHHHH-HHHHHHHH-HCT---TEEEE
T ss_pred hCCCEEEEEEECCCCcchhhhH-HHHHHHHH-HcC---CcEEE
Confidence 3557888888899999999986 45666664 444 55555
No 56
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=35.10 E-value=64 Score=22.23 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=20.3
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~-~l~~~~ 45 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAP-VVDEIA 45 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCCcEEEEEECCCCHhHHHHHH-HHHHHH
Confidence 4667788888999999999853 344443
No 57
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=35.06 E-value=15 Score=24.90 Aligned_cols=16 Identities=31% Similarity=0.787 Sum_probs=13.4
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.+|+-+-||+|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRA 17 (85)
T ss_dssp EEEEECCTTSTHHHHH
T ss_pred EEEEEeCCCCCCHHHH
Confidence 5788888899999876
No 58
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=34.45 E-value=65 Score=22.47 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=21.1
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+.+.. .|..+.
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~-~l~~~~ 49 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAP-SLEAIA 49 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred hCCCeEEEEEECCCCHhHHhcCH-HHHHHH
Confidence 35677788889999999999853 344444
No 59
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=34.27 E-value=17 Score=32.22 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=18.6
Q ss_pred cCCeeEEEEEEEeCChhhHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANF 52 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~F 52 (258)
..+++.|+||.-.-||+|.+.
T Consensus 40 ~~~~~~VelyTs~gCp~C~~A 60 (270)
T 2axo_A 40 EAVKGVVELFTSQGCASCPPA 60 (270)
T ss_dssp SCCCCEEEEEECTTCTTCHHH
T ss_pred cCCCcEEEEEeCCCCCChHHH
Confidence 456699999999999999987
No 60
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=34.25 E-value=70 Score=22.12 Aligned_cols=22 Identities=18% Similarity=0.419 Sum_probs=18.0
Q ss_pred cCCeeEEEEEEEeCChhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi 53 (258)
..++.-|-.||-+-||.|+.+.
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~ 41 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVT 41 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHH
T ss_pred hcCCEEEEEEeCCCChhHHHHH
Confidence 3457778888999999999884
No 61
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=33.95 E-value=13 Score=24.91 Aligned_cols=18 Identities=33% Similarity=0.920 Sum_probs=15.9
Q ss_pred eEEEEEEEeCChhhHHHH
Q 025043 36 VKLSLYYESLCPYCANFI 53 (258)
Q Consensus 36 V~V~vYyESlCPd~~~Fi 53 (258)
|.|.+||-+-||.|+++.
T Consensus 3 ~~vv~f~~~~C~~C~~~~ 20 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAI 20 (85)
T ss_dssp CCEEEESCSSSCCSTTHH
T ss_pred EEEEEEECCCCcchHHHH
Confidence 678899999999999885
No 62
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=33.55 E-value=67 Score=23.08 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=21.4
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+++.. .|..+.
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~-~l~~~~ 57 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGP-RLEKMV 57 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred cCCCcEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 45677788888999999999853 444444
No 63
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=32.78 E-value=65 Score=23.81 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=20.9
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..++-|-.||-+-||.|+++.. .|..+.
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~-~l~~l~ 64 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAP-ILDELA 64 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHH-HHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHH-HHHHHH
Confidence 4577888899999999999853 344443
No 64
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=32.66 E-value=70 Score=22.76 Aligned_cols=33 Identities=12% Similarity=0.270 Sum_probs=23.0
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..+.-|-.||-+-||.|+.+.. .|..+.+ ++.+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 65 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAP-VFADLAK-KFPN 65 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHH-HHHHHHH-HCTT
T ss_pred cCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 5677788888999999999853 4444443 3444
No 65
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=32.64 E-value=56 Score=24.14 Aligned_cols=39 Identities=10% Similarity=0.069 Sum_probs=27.2
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLV 74 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lV 74 (258)
..|+-|-.|+-+-||.|+..+ ..|..+++ ++.+. ++++|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~-~~l~~l~~-~~~~~-~~~vv 69 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARN-VQLANEVN-KFGPD-KIAMC 69 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHH-HHHHHHHT-TSCTT-TEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHH-HHHHHHHH-HhCcC-CEEEE
Confidence 457778888899999999886 35666664 45432 45554
No 66
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=32.03 E-value=82 Score=22.63 Aligned_cols=30 Identities=23% Similarity=0.543 Sum_probs=21.7
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
...++-|-.||-+-||.|+.+.. .|..+.+
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~-~l~~~~~ 53 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQK-ELSYVSK 53 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHH-HHHHHHH
T ss_pred hCCCcEEEEEECCCCccHHHHHH-HHHHHHH
Confidence 45677788889999999999853 4444443
No 67
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=31.65 E-value=19 Score=24.21 Aligned_cols=16 Identities=19% Similarity=0.609 Sum_probs=13.8
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.+|+-+-||+|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (81)
T 1h75_A 2 RITIYTRNDCVQCHAT 17 (81)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred EEEEEcCCCChhHHHH
Confidence 4788999999999875
No 68
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=31.45 E-value=75 Score=22.05 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=20.6
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..++-|-.||-+-||.|+.+.. .|..+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~ 52 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAP-IFAELA 52 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHH-HHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 4677788888899999999853 444444
No 69
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=31.42 E-value=75 Score=23.42 Aligned_cols=34 Identities=12% Similarity=0.192 Sum_probs=23.2
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
...++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p-~l~~l~~-~~~~ 71 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAP-ILDEIAD-EYQG 71 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHH-HHHHHHH-HTTT
T ss_pred hcCCEEEEEEECCCCHHHHHHhH-HHHHHHH-HhcC
Confidence 45677888899999999998843 3444433 3443
No 70
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=31.42 E-value=78 Score=21.63 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=22.5
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..+.-|-.||-+-||.|+.+. ..|..+.+ .+.+
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 52 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYE-PIYKKVAE-KYKG 52 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred cCCeEEEEEECCCCHHHHhhh-HHHHHHHH-HhCC
Confidence 356778888899999999985 34444443 3444
No 71
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=31.17 E-value=20 Score=23.52 Aligned_cols=16 Identities=25% Similarity=0.673 Sum_probs=13.6
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
.|.+|+-+-||.|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (75)
T 1r7h_A 2 SITLYTKPACVQCTAT 17 (75)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred eEEEEeCCCChHHHHH
Confidence 4788999999999875
No 72
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=30.96 E-value=81 Score=21.50 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=23.0
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
.+++-|-.||-+-||.|+.+.. .|..+.+ ...+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 51 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKP-FFHSLSE-KYSN 51 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH-HSTT
T ss_pred CCCeEEEEEECCCChhhHHHHH-HHHHHHH-HccC
Confidence 5677888899999999999853 4444433 3444
No 73
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=30.90 E-value=56 Score=23.74 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=24.1
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVN 70 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivd 70 (258)
..++.|-.||-+-||.|+.++. .|..+.+ ++.+.+.
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~-~l~~l~~-~~~~~~~ 63 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMP-QVNEFRD-KYQDQLN 63 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTSE
T ss_pred CCCEEEEEEEcCCCHHHHHHhH-HHHHHHH-HhcCCcE
Confidence 4567777888899999999853 5555554 3444333
No 74
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=30.57 E-value=24 Score=25.03 Aligned_cols=16 Identities=25% Similarity=0.920 Sum_probs=14.0
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
.|.+|+-+-||+|++.
T Consensus 13 ~v~~f~~~~C~~C~~~ 28 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKT 28 (105)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred CEEEEEcCCCHhHHHH
Confidence 4788999999999876
No 75
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=30.18 E-value=83 Score=22.17 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=21.1
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~-~~~~~~ 56 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAP-VLEEIA 56 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred hCCCcEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 45677788899999999999853 344443
No 76
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=29.68 E-value=27 Score=24.67 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=11.9
Q ss_pred EEEEEEEeCChhhH
Q 025043 37 KLSLYYESLCPYCA 50 (258)
Q Consensus 37 ~V~vYyESlCPd~~ 50 (258)
+|.||.-+.||+|.
T Consensus 3 ~v~ly~~~~C~~c~ 16 (93)
T 1t1v_A 3 GLRVYSTSVTGSRE 16 (93)
T ss_dssp CEEEEECSSCSCHH
T ss_pred CEEEEEcCCCCCch
Confidence 58899999999993
No 77
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=29.48 E-value=67 Score=23.93 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=26.0
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLV 74 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lV 74 (258)
..|+-|-.|+-+-||.|+..+...|..+++ ++.+. ++++|
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~-~~~~~-~v~~v 66 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRA-AFPED-KVAVL 66 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCTT-TEEEE
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHH-HhCcC-CEEEE
Confidence 456777777789999999963356666665 45421 34444
No 78
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=29.39 E-value=84 Score=23.02 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=22.7
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..++-|-.||-+-||.|+++. ..|..+.. .+.+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~-~~~~~~~~-~~~~ 82 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVA-PILEELSK-EYAG 82 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHH-HHHHHHHH-HTTT
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HhcC
Confidence 467788888999999999985 23444443 3444
No 79
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=29.16 E-value=18 Score=26.81 Aligned_cols=16 Identities=19% Similarity=0.644 Sum_probs=13.3
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.||.-+-||+|.+.
T Consensus 18 ~v~vy~~~~Cp~C~~a 33 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRV 33 (114)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEEcCCCCcHHHH
Confidence 4778999999999766
No 80
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=28.96 E-value=23 Score=27.40 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=14.1
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
+|.||.-+.||+|.+.
T Consensus 15 ~Vvvysk~~Cp~C~~a 30 (127)
T 3l4n_A 15 PIIIFSKSTCSYSKGM 30 (127)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEEcCCCccHHHH
Confidence 4899999999999876
No 81
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=28.91 E-value=22 Score=24.61 Aligned_cols=16 Identities=38% Similarity=0.924 Sum_probs=14.0
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
.|.+|+-+.||+|++.
T Consensus 7 ~v~ly~~~~C~~C~~~ 22 (92)
T 2khp_A 7 DVIIYTRPGCPYCARA 22 (92)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 5889999999999875
No 82
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=28.43 E-value=86 Score=21.73 Aligned_cols=27 Identities=11% Similarity=0.178 Sum_probs=19.9
Q ss_pred CeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 34 QKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
.++-|-.||-+-||.|+.+.. .|..+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~-~l~~~~ 50 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAP-LFETLS 50 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 567788888999999999853 344443
No 83
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=28.39 E-value=72 Score=24.47 Aligned_cols=30 Identities=27% Similarity=0.225 Sum_probs=19.9
Q ss_pred CchHHHHHHHHHHhccCCCCCceeeEEEECCeecH
Q 025043 158 GEGTKLTLKYAEETDSLKPPHRFVPWVTVNNQALE 192 (258)
Q Consensus 158 ~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 192 (258)
..|.++.....+.|. ...||.|+|||++.+
T Consensus 53 ~d~~~~~~~l~~~~G-----~~tVP~IfI~G~~IG 82 (127)
T 3l4n_A 53 GHGEELQEYIKLVTG-----RGTVPNLLVNGVSRG 82 (127)
T ss_dssp TTHHHHHHHHHHHHS-----CCSSCEEEETTEECC
T ss_pred CCHHHHHHHHHHHcC-----CCCcceEEECCEEEc
Confidence 345555544444443 368999999999974
No 84
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=28.24 E-value=36 Score=24.33 Aligned_cols=21 Identities=14% Similarity=0.485 Sum_probs=17.9
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..++-|-.||-+-||.|+++.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~ 52 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIA 52 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHh
Confidence 567788889999999999884
No 85
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=28.13 E-value=18 Score=25.13 Aligned_cols=17 Identities=29% Similarity=0.624 Sum_probs=14.6
Q ss_pred eEEEEEEEeCChhhHHH
Q 025043 36 VKLSLYYESLCPYCANF 52 (258)
Q Consensus 36 V~V~vYyESlCPd~~~F 52 (258)
.+|.||+-+.||+|++.
T Consensus 12 ~~v~ly~~~~Cp~C~~~ 28 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRT 28 (92)
T ss_dssp SSSEEEECTTCHHHHHH
T ss_pred ceEEEEECCCChHHHHH
Confidence 35889999999999885
No 86
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=27.84 E-value=98 Score=22.95 Aligned_cols=40 Identities=23% Similarity=0.392 Sum_probs=26.2
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLV 74 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lV 74 (258)
..|+-|-.|+-+-||.|+..+...|..+++ ++.+. ++++|
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~-~~~~~-~v~~v 68 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHR-MIDES-QVQVI 68 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCTT-TEEEE
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHH-HhCcC-CcEEE
Confidence 457777788889999999853456666664 45442 34444
No 87
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=27.70 E-value=60 Score=23.09 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=21.3
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
..++.|-.||-+-||.|+.++ ..|..+.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~-~~l~~~~~ 52 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEA-PVVGQVAA 52 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHH-HHHHHHHH
Confidence 456777788899999999985 34555554
No 88
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.79 E-value=53 Score=23.74 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=23.1
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
...++-|-.||-.-||.|+++.. .|..+.+ .+.+
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~-~~~~~~~-~~~~ 66 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTP-EWKKAAT-ALKD 66 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHH-HHHHHHH-HTTT
T ss_pred cCCCeEEEEEECCCCHHHHhhCH-HHHHHHH-HhcC
Confidence 45677888899999999998843 3444333 3444
No 89
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=26.73 E-value=22 Score=26.28 Aligned_cols=16 Identities=19% Similarity=0.681 Sum_probs=12.9
Q ss_pred EEEEEEEe-----CChhhHHH
Q 025043 37 KLSLYYES-----LCPYCANF 52 (258)
Q Consensus 37 ~V~vYyES-----lCPd~~~F 52 (258)
+|.||..+ .||+|++.
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~a 39 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTV 39 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHH
T ss_pred CEEEEEecCCCCCCChhHHHH
Confidence 47788887 89999876
No 90
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=26.54 E-value=88 Score=22.82 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=20.8
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..++-|-.||-+-||.|+.+.. .|..+.
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~-~l~~l~ 64 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAP-FFADLA 64 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred cCCEEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 4677888899999999999853 344443
No 91
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=25.75 E-value=1.1e+02 Score=21.93 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=23.1
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..++-|-.||-+-||.|+++.. .|..+.+ ++.+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p-~l~~l~~-~~~~ 62 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKP-FFHSLSE-KYSN 62 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHT-TCTT
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 6778888899999999998852 3444432 3444
No 92
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=25.59 E-value=1.4e+02 Score=21.39 Aligned_cols=32 Identities=16% Similarity=0.451 Sum_probs=23.4
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLS 66 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~ 66 (258)
..++.|-.||-+-||.|+.++ ..|..+.+ ++.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~-~~l~~~~~-~~~ 64 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKEL-PQFQSFYD-AHP 64 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHH-HHHHHHHH-HCC
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HcC
Confidence 567777788899999999975 45666654 444
No 93
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=25.55 E-value=1.2e+02 Score=21.38 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=21.6
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+++. ..|..+.
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~-p~l~~l~ 50 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIA-PMIEKFS 50 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHH-HHHHHHH
T ss_pred hcCCEEEEEEECCcCHhHHHHH-HHHHHHH
Confidence 4577888889999999999885 3444444
No 94
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=25.51 E-value=29 Score=25.23 Aligned_cols=15 Identities=27% Similarity=0.984 Sum_probs=13.5
Q ss_pred EEEEEEeCChhhHHH
Q 025043 38 LSLYYESLCPYCANF 52 (258)
Q Consensus 38 V~vYyESlCPd~~~F 52 (258)
|.+|.-+-||+|++.
T Consensus 21 v~vy~~~~Cp~C~~~ 35 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEV 35 (113)
T ss_dssp EEEEECTTCHHHHHH
T ss_pred EEEEECCCChhHHHH
Confidence 888999999999866
No 95
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=25.24 E-value=32 Score=25.24 Aligned_cols=16 Identities=31% Similarity=0.997 Sum_probs=14.3
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
.|.+|+-+-||+|++.
T Consensus 20 ~vv~f~~~~Cp~C~~~ 35 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNA 35 (114)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred CEEEEEeCCChhHHHH
Confidence 5889999999999876
No 96
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=25.01 E-value=1.1e+02 Score=21.04 Aligned_cols=20 Identities=15% Similarity=0.584 Sum_probs=16.8
Q ss_pred CeeEEEEEEEeCChhhHHHH
Q 025043 34 QKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 34 ~kV~V~vYyESlCPd~~~Fi 53 (258)
.++-|-.||-+-||.|+++.
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~ 40 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLA 40 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHH
T ss_pred CCcEEEEEECCCChhHHHhh
Confidence 55678889999999999874
No 97
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=24.67 E-value=96 Score=22.22 Aligned_cols=33 Identities=15% Similarity=0.347 Sum_probs=22.4
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..++-|-.||-+-||.|+++.. .|..+.+ ++.+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p-~l~~~~~-~~~~ 61 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQP-HLTKLIQ-AYPD 61 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHH-HHHHHHH-HCTT
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 4567788888999999999853 3444443 3444
No 98
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=24.50 E-value=1.2e+02 Score=21.19 Aligned_cols=29 Identities=7% Similarity=0.250 Sum_probs=21.0
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+++.. .|..+.
T Consensus 24 ~~~k~vlv~f~a~~C~~C~~~~~-~l~~l~ 52 (112)
T 1syr_A 24 SQNELVIVDFFAEWCGPCKRIAP-FYEECS 52 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred ccCCeEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 35677788888999999999853 444444
No 99
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=24.26 E-value=21 Score=24.68 Aligned_cols=16 Identities=38% Similarity=0.955 Sum_probs=13.8
Q ss_pred EEEEEEEeCChhhHHH
Q 025043 37 KLSLYYESLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyESlCPd~~~F 52 (258)
.|.+|+-+.||+|++.
T Consensus 7 ~v~~y~~~~C~~C~~~ 22 (89)
T 2klx_A 7 EIILYTRPNCPYCKRA 22 (89)
T ss_dssp CEEEESCSCCTTTHHH
T ss_pred eEEEEECCCChhHHHH
Confidence 5788999999999875
No 100
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=24.06 E-value=1.1e+02 Score=22.48 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=22.1
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
...|+-|-.|+-+-||.|+.++. .|..+.+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~-~l~~l~~ 55 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSFP-WMNQMQA 55 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHHH-HHHHHHH
T ss_pred hCCCEEEEEEECCcCHHHHHHHH-HHHHHHH
Confidence 35677788888999999998864 4555553
No 101
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=23.94 E-value=1.2e+02 Score=22.00 Aligned_cols=29 Identities=14% Similarity=0.330 Sum_probs=21.5
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+++.. .|..+.
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p-~l~~~~ 68 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQST-EMDKLQ 68 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred ccCCEEEEEEECCCCHHHHHHhH-HHHHHH
Confidence 56778888889999999998853 344443
No 102
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=23.80 E-value=99 Score=21.90 Aligned_cols=29 Identities=17% Similarity=0.394 Sum_probs=20.6
Q ss_pred cCCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
...++-|-.||-+-||.|+++.. .|..+.
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~-~~~~~~ 47 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAP-EFELLA 47 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred cCCCeEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 34667788889999999999853 344333
No 103
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=23.70 E-value=27 Score=26.06 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=11.2
Q ss_pred ceeeEEEECCeecH
Q 025043 179 RFVPWVTVNNQALE 192 (258)
Q Consensus 179 ~~VPwI~iNG~~~~ 192 (258)
..||.|+|||++.+
T Consensus 70 ~tvP~ifi~g~~iG 83 (111)
T 3zyw_A 70 PTYPQLYVSGELIG 83 (111)
T ss_dssp CSSCEEEETTEEEE
T ss_pred CCCCEEEECCEEEe
Confidence 46899999998874
No 104
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=23.55 E-value=37 Score=24.49 Aligned_cols=15 Identities=13% Similarity=0.576 Sum_probs=12.8
Q ss_pred EEEEEE-----eCChhhHHH
Q 025043 38 LSLYYE-----SLCPYCANF 52 (258)
Q Consensus 38 V~vYyE-----SlCPd~~~F 52 (258)
|.||+- +-||+|++.
T Consensus 19 vvvf~~g~~~~~~C~~C~~~ 38 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQI 38 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHH
T ss_pred EEEEEecCCCCCCCccHHHH
Confidence 777988 899999875
No 105
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=23.22 E-value=95 Score=23.04 Aligned_cols=22 Identities=32% Similarity=0.854 Sum_probs=18.4
Q ss_pred cCCeeEEEEEEEeCChhhHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi 53 (258)
...++-|-.||-+-||.|+++.
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~ 43 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAME 43 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHH
T ss_pred hCCCcEEEEEECCCChhHHHHH
Confidence 3467778889999999999985
No 106
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=23.01 E-value=40 Score=24.07 Aligned_cols=15 Identities=20% Similarity=0.839 Sum_probs=12.8
Q ss_pred EEEEEEeCChhhHHH
Q 025043 38 LSLYYESLCPYCANF 52 (258)
Q Consensus 38 V~vYyESlCPd~~~F 52 (258)
|.+|+-+-||+|+.+
T Consensus 22 vv~f~a~~C~~C~~~ 36 (116)
T 2e7p_A 22 VVVFSKTYCGYCNRV 36 (116)
T ss_dssp EEEEECTTCHHHHHH
T ss_pred EEEEECCCChhHHHH
Confidence 556999999999876
No 107
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=23.01 E-value=83 Score=22.44 Aligned_cols=29 Identities=21% Similarity=0.495 Sum_probs=21.4
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
..++.|-.||-+-||.|+..+ ..|..+.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~-~~l~~~~~ 51 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEA-PSLSQVAA 51 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHH-HHHHHHHH
Confidence 456777778899999999975 35665554
No 108
>3uor_A ABC transporter sugar binding protein; ALFA/beta protein, periplasmic-binding protein, maltose, SUG binding protein; 2.20A {Xanthomonas axonopodis PV}
Probab=22.83 E-value=87 Score=28.28 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=20.9
Q ss_pred CCCCCchhHHHHHHHHHHhcCCCcccccccccCCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEEEEe
Q 025043 1 MAACHSLPFVLSILLLIFISPSLSFSEDAAAKSQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLVPYG 77 (258)
Q Consensus 1 m~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lVPyG 77 (258)
|.++|.+..++.+++..+++.+.+ + ...++.|+++.. .+ ..-..+++..-|+ +-..-|+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~lLagC~~-~-----~~~~~tlt~w~~---~~-~~~~~~~~~~~F~-~~~pgi~V~~~~~~ 66 (458)
T 3uor_A 1 MGSSHHHHHHSSGLVPRGSHMCER-S-----DPGKTTVRFWAM---GK-EAEVVAELVADFE-KQNPTIHVDVQNIP 66 (458)
T ss_dssp ----------------------------------CEEEEEEEC---TH-HHHHHHHHHHHHH-TTCTTEEEEEEECC
T ss_pred CCCcccccccccchhhhhhhcCCC-C-----CCCCeEEEEEec---CC-cHHHHHHHHHHHH-HHCCCcEEEEEEcC
Confidence 667776655533233333332222 1 235678888864 23 3233456777776 33322555555443
No 109
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=22.53 E-value=55 Score=22.81 Aligned_cols=21 Identities=10% Similarity=0.281 Sum_probs=17.7
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..+.-|-.||-+-||.|+++.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~ 40 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIA 40 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHH
T ss_pred CCCEEEEEEECCCChhhHHHH
Confidence 567778889999999999884
No 110
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=22.41 E-value=1.2e+02 Score=22.13 Aligned_cols=29 Identities=28% Similarity=0.535 Sum_probs=21.3
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
..++.|-.|+-+-||+|+..+. .|..+.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~-~l~~l~~ 55 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMP-KIIKTAN 55 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHH-HHHHHHH
Confidence 4567777888899999998754 4555554
No 111
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=22.08 E-value=87 Score=24.13 Aligned_cols=40 Identities=28% Similarity=0.536 Sum_probs=26.0
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLV 74 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lV 74 (258)
..|+-|-.||-+-||.|+.++- .|..+++ ++.+--++++|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p-~l~~l~~-~~~~~~~v~vv 86 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTP-QLVEFYE-KHHDSKNFEII 86 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEE
T ss_pred CCCEEEEEEECCcChhHHHHHH-HHHHHHH-HhccCCCeEEE
Confidence 4577788888999999999863 4555554 34431244444
No 112
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=22.06 E-value=50 Score=23.23 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=20.4
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..+..|-.||-+-||.|+.+.. .|..+.
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~ 54 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAP-VFAEYA 54 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHhH-HHHHHH
Confidence 3567788889999999999853 344433
No 113
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=22.05 E-value=55 Score=22.34 Aligned_cols=28 Identities=11% Similarity=0.355 Sum_probs=20.3
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVF 61 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 61 (258)
..+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~-~l~~~~ 45 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAP-KVEALA 45 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHhhH-HHHHHH
Confidence 5667777888999999999853 344443
No 114
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=21.95 E-value=80 Score=23.78 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=23.8
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCCeeEEEEE
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLSTIVNLRLV 74 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ivdl~lV 74 (258)
..|+-|-.|+-+-||.|+..+. .|..+++ ++.+. ++++|
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~-~~~vv 72 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNL-ALRELYN-KYASQ-GFEIY 72 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHGGG-TEEEE
T ss_pred CCCEEEEEEEcCCChhhHHHHH-HHHHHHH-HhccC-CeEEE
Confidence 3456666667799999998764 4555553 34332 34444
No 115
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=21.94 E-value=35 Score=25.51 Aligned_cols=16 Identities=19% Similarity=0.141 Sum_probs=14.3
Q ss_pred EEEEEEeCChhhHHHH
Q 025043 38 LSLYYESLCPYCANFI 53 (258)
Q Consensus 38 V~vYyESlCPd~~~Fi 53 (258)
|.||.-+.||+|++-.
T Consensus 2 i~iY~~~~C~~C~kak 17 (114)
T 1rw1_A 2 YVLYGIKACDTMKKAR 17 (114)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCChHHHHHH
Confidence 7899999999998873
No 116
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=21.92 E-value=43 Score=24.39 Aligned_cols=16 Identities=13% Similarity=0.542 Sum_probs=13.8
Q ss_pred EEEEEEE-----eCChhhHHH
Q 025043 37 KLSLYYE-----SLCPYCANF 52 (258)
Q Consensus 37 ~V~vYyE-----SlCPd~~~F 52 (258)
+|.||+- +.||+|++.
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~a 36 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQI 36 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHH
T ss_pred CEEEEEecCCCCCCCchHHHH
Confidence 3778999 899999876
No 117
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=21.78 E-value=84 Score=22.17 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=17.3
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..++-|-.||-+-||.|+.+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~ 36 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIA 36 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 456777788889999999885
No 118
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=21.68 E-value=51 Score=23.12 Aligned_cols=21 Identities=14% Similarity=0.252 Sum_probs=15.8
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..++-|-.||-+-||.|+.+.
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~ 40 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALK 40 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 467778889999999999985
No 119
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=21.55 E-value=1.3e+02 Score=22.38 Aligned_cols=29 Identities=24% Similarity=0.549 Sum_probs=21.6
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
..|+-|-.||-+-||.|+.++. .|..+.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~-~l~~l~~ 61 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIP-DMVQVQK 61 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHH-HHHHHHH
Confidence 4567777888999999999863 4555554
No 120
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=21.46 E-value=1.5e+02 Score=20.69 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=23.1
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHHhcCCC
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFNTDLST 67 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~~ 67 (258)
..|+-|-.+|-+-||.|+..+. .|..+.+ +..+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 53 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLP-DTDEIAK-EAGD 53 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHH-HHHHHHH-TCTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-HhCC
Confidence 4566777788899999998854 5666664 3443
No 121
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=21.35 E-value=31 Score=26.13 Aligned_cols=14 Identities=21% Similarity=0.339 Sum_probs=11.6
Q ss_pred ceeeEEEECCeecH
Q 025043 179 RFVPWVTVNNQALE 192 (258)
Q Consensus 179 ~~VPwI~iNG~~~~ 192 (258)
..||.|+|||++.+
T Consensus 73 ~tvP~vfI~g~~iG 86 (121)
T 3gx8_A 73 PTIPQLYVNKEFIG 86 (121)
T ss_dssp CSSCEEEETTEEEE
T ss_pred CCCCeEEECCEEEe
Confidence 47899999999874
No 122
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=21.22 E-value=32 Score=26.13 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=11.1
Q ss_pred ceeeEEEECCeecH
Q 025043 179 RFVPWVTVNNQALE 192 (258)
Q Consensus 179 ~~VPwI~iNG~~~~ 192 (258)
..||.|+|||++.+
T Consensus 75 ~tvP~vfI~g~~IG 88 (118)
T 2wem_A 75 PTIPQVYLNGEFVG 88 (118)
T ss_dssp CSSCEEEETTEEEE
T ss_pred CCcCeEEECCEEEe
Confidence 46899999998863
No 123
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=20.90 E-value=57 Score=23.31 Aligned_cols=21 Identities=24% Similarity=0.629 Sum_probs=16.9
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..+.-|-.||-+-||.|+++.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~ 48 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFA 48 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHH
Confidence 345677888999999999984
No 124
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=20.81 E-value=59 Score=23.09 Aligned_cols=21 Identities=24% Similarity=0.621 Sum_probs=17.0
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..+..|-.||-+-||.|+.+.
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~ 38 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNME 38 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHH
T ss_pred cCCCEEEEEECCCCHhHHHHH
Confidence 346678889999999999873
No 125
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=20.79 E-value=47 Score=26.58 Aligned_cols=21 Identities=24% Similarity=0.469 Sum_probs=17.8
Q ss_pred CCeeEEEEEEEeCChhhHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFI 53 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi 53 (258)
..++.|-.|+.+=||+|+..+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~ 73 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINL 73 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHH
Confidence 457788889999999999874
No 126
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=20.54 E-value=50 Score=19.66 Aligned_cols=17 Identities=35% Similarity=0.687 Sum_probs=14.1
Q ss_pred ccCCCCCceeeEEEECC
Q 025043 172 DSLKPPHRFVPWVTVNN 188 (258)
Q Consensus 172 ~~l~P~~~~VPwI~iNG 188 (258)
++++|+.+-|||-.+.|
T Consensus 4 dsMN~pSTKVsWAaVtg 20 (33)
T 1uvq_C 4 DSMNLPSTKVSWAAVGG 20 (33)
T ss_pred cccCCCccccceEEecC
Confidence 45678899999999966
No 127
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=20.25 E-value=1.5e+02 Score=21.53 Aligned_cols=29 Identities=24% Similarity=0.543 Sum_probs=21.0
Q ss_pred CCeeEEEEEEEeCChhhHHHHHHhhHHHHH
Q 025043 33 SQKVKLSLYYESLCPYCANFIENQLVKVFN 62 (258)
Q Consensus 33 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 62 (258)
..|+-|-.|+-+-||.|+..+. .|..+++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~-~l~~l~~ 55 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTP-VLAEFYE 55 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECcCCHHHHHHHH-HHHHHHH
Confidence 4567777788899999998853 4555553
No 128
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=20.07 E-value=64 Score=22.88 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=18.8
Q ss_pred cCCeeEEEEEEEeCChhhHHHHH
Q 025043 32 KSQKVKLSLYYESLCPYCANFIE 54 (258)
Q Consensus 32 ~~~kV~V~vYyESlCPd~~~Fi~ 54 (258)
...+.-|-.||-+-||.|+++.-
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p 45 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAP 45 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHH
T ss_pred cCCCCEEEEEECCCCHhHHHhhH
Confidence 45677888899999999999853
Done!