Query 025045
Match_columns 258
No_of_seqs 257 out of 2345
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 09:34:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025045.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025045hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02385 hydrolase; alpha/beta 100.0 2.2E-29 4.9E-34 224.4 20.2 192 64-256 7-198 (349)
2 KOG1455 Lysophospholipase [Lip 99.9 5.2E-25 1.1E-29 186.1 16.5 148 111-258 20-167 (313)
3 PLN02298 hydrolase, alpha/beta 99.9 3.2E-23 7E-28 183.2 18.2 143 114-256 28-170 (330)
4 PHA02857 monoglyceride lipase; 99.9 5.9E-21 1.3E-25 164.3 17.2 130 122-256 4-133 (276)
5 COG2267 PldB Lysophospholipase 99.8 3.8E-20 8.3E-25 161.4 16.5 135 118-257 9-144 (298)
6 PLN02652 hydrolase; alpha/beta 99.8 1.4E-19 3.1E-24 163.6 18.8 141 112-257 104-247 (395)
7 PRK10749 lysophospholipase L2; 99.8 1.6E-19 3.6E-24 159.8 17.8 132 119-256 31-167 (330)
8 TIGR03101 hydr2_PEP hydrolase, 99.8 2.6E-19 5.7E-24 153.3 17.2 126 126-256 7-135 (266)
9 PRK13604 luxD acyl transferase 99.8 2.7E-18 5.7E-23 148.6 14.8 132 119-257 10-143 (307)
10 PRK00870 haloalkane dehalogena 99.8 3.7E-18 8E-23 149.0 15.4 115 129-254 34-149 (302)
11 PLN02824 hydrolase, alpha/beta 99.8 4E-18 8.7E-23 148.1 15.1 118 125-255 14-137 (294)
12 TIGR02240 PHA_depoly_arom poly 99.8 4.3E-18 9.4E-23 146.7 14.5 120 124-255 7-126 (276)
13 TIGR01607 PST-A Plasmodium sub 99.8 3.5E-18 7.6E-23 151.5 13.5 130 124-256 3-186 (332)
14 PLN03087 BODYGUARD 1 domain co 99.8 7.8E-18 1.7E-22 154.9 15.9 124 125-255 182-309 (481)
15 PLN02965 Probable pheophorbida 99.8 5.4E-18 1.2E-22 144.5 13.1 103 146-254 4-106 (255)
16 TIGR03611 RutD pyrimidine util 99.8 6.7E-18 1.5E-22 141.9 13.1 115 132-256 2-116 (257)
17 PRK05077 frsA fermentation/res 99.8 2.7E-17 5.8E-22 149.8 17.6 135 117-256 167-301 (414)
18 PLN02679 hydrolase, alpha/beta 99.8 1.6E-17 3.4E-22 148.9 15.3 121 127-255 69-191 (360)
19 PRK03592 haloalkane dehalogena 99.8 2E-17 4.4E-22 143.8 15.3 115 125-254 13-127 (295)
20 PLN02511 hydrolase 99.7 6.6E-17 1.4E-21 146.2 17.7 138 116-256 69-211 (388)
21 TIGR01250 pro_imino_pep_2 prol 99.7 5.7E-17 1.2E-21 138.2 16.1 123 124-255 7-131 (288)
22 PLN02211 methyl indole-3-aceta 99.7 2.7E-17 5.9E-22 142.0 13.7 117 127-254 5-121 (273)
23 PRK10673 acyl-CoA esterase; Pr 99.7 4.1E-17 8.8E-22 138.3 13.4 112 131-253 3-114 (255)
24 TIGR03056 bchO_mg_che_rel puta 99.7 6.9E-17 1.5E-21 138.1 14.3 119 125-255 12-130 (278)
25 PF12697 Abhydrolase_6: Alpha/ 99.7 3.3E-17 7.2E-22 134.2 11.6 101 148-256 1-102 (228)
26 PLN03084 alpha/beta hydrolase 99.7 1.5E-16 3.3E-21 143.2 15.6 129 115-255 101-232 (383)
27 PRK06489 hypothetical protein; 99.7 1.2E-16 2.5E-21 143.3 14.2 123 126-254 47-188 (360)
28 PRK03204 haloalkane dehalogena 99.7 2.2E-16 4.8E-21 137.1 15.5 122 118-254 14-135 (286)
29 TIGR03343 biphenyl_bphD 2-hydr 99.7 1.8E-16 3.9E-21 136.4 14.7 121 122-254 10-135 (282)
30 PRK10985 putative hydrolase; P 99.7 3.7E-16 8.1E-21 138.1 16.8 134 121-257 34-170 (324)
31 PRK11126 2-succinyl-6-hydroxy- 99.7 1.6E-16 3.4E-21 133.7 12.6 100 145-255 2-102 (242)
32 TIGR02427 protocat_pcaD 3-oxoa 99.7 2.2E-16 4.7E-21 131.5 11.7 102 145-255 13-114 (251)
33 PLN02578 hydrolase 99.7 5.4E-16 1.2E-20 138.6 14.6 115 125-254 72-186 (354)
34 TIGR01249 pro_imino_pep_1 prol 99.7 4.7E-16 1E-20 136.2 13.6 123 121-255 7-130 (306)
35 KOG4178 Soluble epoxide hydrol 99.7 7E-16 1.5E-20 132.6 14.0 120 124-254 27-147 (322)
36 KOG4409 Predicted hydrolase/ac 99.7 5.3E-16 1.1E-20 134.0 13.2 127 118-254 65-194 (365)
37 TIGR03695 menH_SHCHC 2-succiny 99.7 4.7E-16 1E-20 129.1 12.3 103 146-256 2-106 (251)
38 TIGR01392 homoserO_Ac_trn homo 99.7 4.2E-16 9.2E-21 139.1 11.9 125 125-256 12-163 (351)
39 KOG1552 Predicted alpha/beta h 99.7 1.2E-15 2.6E-20 127.0 13.0 131 117-257 34-165 (258)
40 TIGR00976 /NonD putative hydro 99.7 6.2E-16 1.3E-20 145.8 12.4 129 125-257 3-134 (550)
41 COG1647 Esterase/lipase [Gener 99.6 1.3E-15 2.7E-20 123.8 10.7 105 146-257 16-120 (243)
42 PRK08775 homoserine O-acetyltr 99.6 1E-15 2.2E-20 136.3 11.0 116 127-255 44-173 (343)
43 PRK10566 esterase; Provisional 99.6 5E-15 1.1E-19 125.5 14.8 114 133-249 14-135 (249)
44 TIGR03100 hydr1_PEP hydrolase, 99.6 1.6E-14 3.4E-19 124.8 18.0 127 123-256 6-135 (274)
45 PRK10349 carboxylesterase BioH 99.6 3.1E-15 6.8E-20 127.2 12.5 95 146-254 14-108 (256)
46 TIGR01840 esterase_phb esteras 99.6 3.5E-15 7.6E-20 124.0 11.8 122 134-255 2-130 (212)
47 PRK07581 hypothetical protein; 99.6 1.6E-15 3.4E-20 134.7 9.8 122 125-254 22-158 (339)
48 PLN02872 triacylglycerol lipas 99.6 2.2E-15 4.7E-20 136.1 10.0 140 114-257 40-199 (395)
49 PRK00175 metX homoserine O-ace 99.6 5.7E-15 1.2E-19 133.2 12.6 123 126-255 30-182 (379)
50 PLN02894 hydrolase, alpha/beta 99.6 2.1E-14 4.6E-19 130.5 16.4 114 130-254 93-210 (402)
51 PF12146 Hydrolase_4: Putative 99.6 4.9E-15 1.1E-19 103.7 9.2 79 128-209 1-79 (79)
52 PRK14875 acetoin dehydrogenase 99.6 2E-14 4.4E-19 128.5 14.2 116 127-255 117-232 (371)
53 KOG4391 Predicted alpha/beta h 99.6 8.4E-15 1.8E-19 118.6 9.2 137 114-257 50-186 (300)
54 TIGR01738 bioH putative pimelo 99.6 1E-14 2.3E-19 121.1 10.1 97 145-255 4-100 (245)
55 TIGR02821 fghA_ester_D S-formy 99.6 2.7E-13 5.8E-18 117.2 17.6 132 122-257 18-175 (275)
56 KOG2564 Predicted acetyltransf 99.6 5.6E-14 1.2E-18 117.8 12.6 120 127-251 56-178 (343)
57 PLN00021 chlorophyllase 99.5 1.9E-13 4.1E-18 120.0 15.8 118 129-256 37-167 (313)
58 TIGR01836 PHA_synth_III_C poly 99.5 7.2E-14 1.6E-18 124.8 12.6 121 131-257 48-173 (350)
59 PF05448 AXE1: Acetyl xylan es 99.5 4.6E-13 1E-17 117.8 17.0 141 112-255 50-209 (320)
60 PRK05855 short chain dehydroge 99.5 1E-13 2.3E-18 130.8 13.7 107 123-240 7-114 (582)
61 TIGR03230 lipo_lipase lipoprot 99.5 1.4E-13 3E-18 125.0 13.6 109 145-254 41-153 (442)
62 PF12695 Abhydrolase_5: Alpha/ 99.5 1.2E-13 2.6E-18 106.9 10.9 95 147-255 1-95 (145)
63 cd00707 Pancreat_lipase_like P 99.5 6.4E-14 1.4E-18 121.0 10.4 110 145-255 36-147 (275)
64 KOG1838 Alpha/beta hydrolase [ 99.5 3.7E-13 8.1E-18 119.5 14.6 138 114-254 89-234 (409)
65 PLN02442 S-formylglutathione h 99.5 9.5E-13 2.1E-17 114.2 16.7 144 112-257 13-180 (283)
66 PLN02980 2-oxoglutarate decarb 99.5 4E-13 8.7E-18 139.8 16.8 102 145-254 1371-1479(1655)
67 PF02129 Peptidase_S15: X-Pro 99.5 1.9E-13 4.2E-18 117.9 11.5 127 127-257 1-138 (272)
68 PF06500 DUF1100: Alpha/beta h 99.5 2.9E-13 6.2E-18 120.9 12.2 127 124-255 170-296 (411)
69 PRK10162 acetyl esterase; Prov 99.5 1.2E-12 2.6E-17 115.5 14.5 129 117-257 56-197 (318)
70 KOG1454 Predicted hydrolase/ac 99.5 2.8E-13 6E-18 119.6 9.8 104 145-255 58-166 (326)
71 COG0429 Predicted hydrolase of 99.4 1.9E-12 4.2E-17 111.5 13.3 132 121-256 52-186 (345)
72 PF12715 Abhydrolase_7: Abhydr 99.4 2.5E-12 5.3E-17 113.4 13.7 143 112-255 82-260 (390)
73 COG1506 DAP2 Dipeptidyl aminop 99.4 8E-13 1.7E-17 126.3 10.7 142 114-256 361-508 (620)
74 PRK11071 esterase YqiA; Provis 99.4 4.1E-12 8.9E-17 103.9 11.3 90 146-256 2-94 (190)
75 COG3458 Acetyl esterase (deace 99.4 3.4E-12 7.3E-17 106.8 10.7 142 112-256 50-211 (321)
76 COG0412 Dienelactone hydrolase 99.4 1.9E-11 4.1E-16 103.2 15.2 129 124-255 7-146 (236)
77 COG0657 Aes Esterase/lipase [L 99.4 9E-12 1.9E-16 109.5 13.0 125 125-257 58-193 (312)
78 PRK11460 putative hydrolase; P 99.4 1E-11 2.3E-16 104.7 12.6 109 145-254 16-137 (232)
79 PRK10115 protease 2; Provision 99.3 7.8E-12 1.7E-16 120.6 12.1 142 115-257 413-561 (686)
80 PF10503 Esterase_phd: Esteras 99.3 1.2E-11 2.5E-16 103.0 11.3 124 131-254 1-131 (220)
81 PF01738 DLH: Dienelactone hyd 99.3 1.6E-11 3.4E-16 102.3 11.1 119 132-253 2-130 (218)
82 TIGR01838 PHA_synth_I poly(R)- 99.3 3E-11 6.5E-16 112.6 13.8 122 130-257 173-304 (532)
83 PRK06765 homoserine O-acetyltr 99.3 1.9E-11 4.1E-16 110.5 11.6 121 128-255 40-196 (389)
84 PF00561 Abhydrolase_1: alpha/ 99.3 8.9E-12 1.9E-16 103.0 8.6 75 174-254 1-78 (230)
85 TIGR03502 lipase_Pla1_cef extr 99.3 6.7E-11 1.4E-15 113.8 15.6 95 145-240 449-575 (792)
86 KOG2382 Predicted alpha/beta h 99.3 2.9E-11 6.2E-16 104.3 11.5 102 145-251 52-155 (315)
87 KOG1515 Arylacetamide deacetyl 99.3 3.4E-11 7.4E-16 106.0 12.2 125 125-257 68-209 (336)
88 PF07859 Abhydrolase_3: alpha/ 99.3 5.8E-12 1.3E-16 104.1 6.6 101 148-257 1-112 (211)
89 COG0596 MhpC Predicted hydrola 99.3 1.3E-10 2.9E-15 95.9 13.3 100 146-255 22-123 (282)
90 PF12740 Chlorophyllase2: Chlo 99.2 1.5E-10 3.2E-15 97.9 12.8 114 133-256 6-132 (259)
91 PF00326 Peptidase_S9: Prolyl 99.2 2.7E-11 5.9E-16 100.4 7.3 94 164-257 5-101 (213)
92 PF06342 DUF1057: Alpha/beta h 99.2 6.7E-10 1.4E-14 94.1 14.7 102 145-254 35-136 (297)
93 COG2945 Predicted hydrolase of 99.2 2.3E-10 5.1E-15 91.4 10.3 108 143-256 26-138 (210)
94 PRK07868 acyl-CoA synthetase; 99.2 3.4E-10 7.4E-15 113.8 13.3 119 131-256 49-178 (994)
95 KOG4667 Predicted esterase [Li 99.2 6.9E-10 1.5E-14 90.2 12.0 105 145-256 33-140 (269)
96 COG4099 Predicted peptidase [G 99.1 2.7E-10 5.8E-15 96.6 9.3 129 122-256 165-305 (387)
97 KOG2624 Triglyceride lipase-ch 99.1 2.6E-10 5.6E-15 102.5 9.4 140 114-257 44-201 (403)
98 COG3509 LpqC Poly(3-hydroxybut 99.1 8.1E-10 1.7E-14 93.9 11.2 131 124-255 40-179 (312)
99 PF02230 Abhydrolase_2: Phosph 99.1 7E-10 1.5E-14 92.4 9.6 109 145-255 14-140 (216)
100 PF10230 DUF2305: Uncharacteri 99.1 4E-09 8.6E-14 90.8 13.7 110 145-255 2-122 (266)
101 COG2936 Predicted acyl esteras 99.0 1.2E-09 2.6E-14 101.1 10.5 138 116-257 17-161 (563)
102 TIGR01839 PHA_synth_II poly(R) 99.0 4.7E-09 1E-13 97.6 12.6 122 130-257 200-330 (560)
103 KOG1553 Predicted alpha/beta h 99.0 3.5E-09 7.6E-14 91.6 9.2 128 121-257 217-347 (517)
104 COG0400 Predicted esterase [Ge 99.0 3.7E-09 8E-14 87.2 8.8 113 142-256 15-135 (207)
105 PF00756 Esterase: Putative es 98.9 9.5E-09 2E-13 87.1 10.6 130 128-257 5-152 (251)
106 PF00975 Thioesterase: Thioest 98.9 1.9E-08 4.1E-13 84.0 11.7 99 147-254 2-103 (229)
107 PF05677 DUF818: Chlamydia CHL 98.9 7.1E-08 1.5E-12 83.9 15.2 117 120-241 113-236 (365)
108 PF07224 Chlorophyllase: Chlor 98.9 1.2E-08 2.6E-13 85.5 9.9 117 131-257 33-159 (307)
109 PF02273 Acyl_transf_2: Acyl t 98.9 4.1E-08 8.8E-13 81.5 12.8 131 120-257 4-136 (294)
110 PF07819 PGAP1: PGAP1-like pro 98.9 2.5E-08 5.5E-13 83.7 11.9 104 145-253 4-121 (225)
111 PF06821 Ser_hydrolase: Serine 98.9 1.1E-08 2.3E-13 82.3 8.4 89 148-255 1-91 (171)
112 PF00151 Lipase: Lipase; Inte 98.9 2.1E-09 4.5E-14 95.1 4.4 111 144-255 70-187 (331)
113 KOG2281 Dipeptidyl aminopeptid 98.8 2.5E-08 5.4E-13 92.3 11.1 144 114-257 609-764 (867)
114 PF05990 DUF900: Alpha/beta hy 98.8 4.2E-08 9E-13 82.8 11.5 111 145-257 18-139 (233)
115 COG2021 MET2 Homoserine acetyl 98.8 2.3E-08 4.9E-13 87.8 10.1 121 128-255 35-182 (368)
116 PF01674 Lipase_2: Lipase (cla 98.8 9.2E-09 2E-13 85.6 5.0 91 147-241 3-96 (219)
117 KOG2984 Predicted hydrolase [G 98.8 1.2E-08 2.6E-13 82.3 5.1 122 125-255 27-149 (277)
118 COG4757 Predicted alpha/beta h 98.7 3.5E-08 7.6E-13 81.2 7.6 111 123-238 10-123 (281)
119 PRK10439 enterobactin/ferric e 98.7 5.7E-07 1.2E-11 82.0 15.7 137 118-255 181-323 (411)
120 PF08538 DUF1749: Protein of u 98.7 1.6E-07 3.4E-12 81.2 11.3 108 145-256 33-149 (303)
121 PF03403 PAF-AH_p_II: Platelet 98.7 7E-08 1.5E-12 87.0 9.6 109 145-255 100-262 (379)
122 KOG2100 Dipeptidyl aminopeptid 98.7 8.7E-08 1.9E-12 93.3 10.9 132 125-257 504-646 (755)
123 KOG4627 Kynurenine formamidase 98.7 5.3E-08 1.2E-12 78.8 7.5 116 130-257 55-174 (270)
124 PRK05371 x-prolyl-dipeptidyl a 98.7 1.3E-07 2.7E-12 92.5 11.3 92 164-257 270-375 (767)
125 COG4188 Predicted dienelactone 98.7 1E-07 2.2E-12 83.9 9.2 113 126-239 47-178 (365)
126 PF05728 UPF0227: Uncharacteri 98.7 2.8E-07 6E-12 75.0 10.9 88 148-256 2-92 (187)
127 PLN02733 phosphatidylcholine-s 98.7 1.4E-07 3E-12 86.4 10.0 90 160-255 108-201 (440)
128 COG4782 Uncharacterized protei 98.6 2.4E-07 5.3E-12 81.0 10.5 112 145-258 116-237 (377)
129 KOG2931 Differentiation-relate 98.6 1.5E-06 3.3E-11 74.0 14.3 123 124-256 28-158 (326)
130 cd00312 Esterase_lipase Estera 98.6 1E-07 2.2E-12 88.9 8.1 119 131-255 79-213 (493)
131 PTZ00472 serine carboxypeptida 98.6 2.5E-06 5.3E-11 79.0 15.8 141 114-256 43-217 (462)
132 KOG2565 Predicted hydrolases o 98.5 4.8E-07 1E-11 79.2 9.2 121 125-252 130-261 (469)
133 PF10340 DUF2424: Protein of u 98.5 1.6E-06 3.5E-11 77.2 12.8 105 145-257 122-237 (374)
134 PF03096 Ndr: Ndr family; Int 98.5 1.2E-06 2.6E-11 75.1 11.4 118 130-256 10-135 (283)
135 PF06028 DUF915: Alpha/beta hy 98.5 4.3E-07 9.4E-12 77.4 8.7 109 145-256 11-144 (255)
136 KOG3101 Esterase D [General fu 98.5 5.1E-07 1.1E-11 73.4 7.7 128 127-256 24-177 (283)
137 COG3319 Thioesterase domains o 98.5 1.3E-06 2.9E-11 74.3 10.6 101 146-256 1-104 (257)
138 TIGR01849 PHB_depoly_PhaZ poly 98.5 3.5E-06 7.7E-11 76.2 13.1 103 146-257 103-210 (406)
139 PRK10252 entF enterobactin syn 98.4 1.3E-06 2.7E-11 90.4 11.5 100 145-254 1068-1170(1296)
140 PF12048 DUF3530: Protein of u 98.4 1.5E-05 3.3E-10 70.0 16.1 126 128-256 70-230 (310)
141 COG1770 PtrB Protease II [Amin 98.4 1E-06 2.2E-11 82.4 8.9 143 115-257 416-564 (682)
142 COG3545 Predicted esterase of 98.4 3.9E-06 8.4E-11 66.5 9.8 92 146-255 3-94 (181)
143 KOG2237 Predicted serine prote 98.4 6E-07 1.3E-11 83.4 5.7 143 115-257 438-586 (712)
144 PF06057 VirJ: Bacterial virul 98.3 3.1E-06 6.7E-11 68.3 8.8 101 147-256 4-108 (192)
145 COG3571 Predicted hydrolase of 98.3 9.1E-06 2E-10 63.5 10.9 102 145-252 14-121 (213)
146 PF00135 COesterase: Carboxyle 98.3 1.7E-06 3.7E-11 81.1 7.8 121 131-253 109-243 (535)
147 COG3208 GrsT Predicted thioest 98.3 3E-06 6.4E-11 70.7 7.1 89 145-241 7-95 (244)
148 PF09752 DUF2048: Uncharacteri 98.2 2.3E-05 5E-10 68.9 12.8 122 130-254 76-209 (348)
149 COG1505 Serine proteases of th 98.2 1.9E-06 4E-11 79.8 5.6 142 114-257 390-537 (648)
150 COG2272 PnbA Carboxylesterase 98.2 2.7E-06 5.8E-11 77.5 6.4 120 131-255 80-217 (491)
151 COG4814 Uncharacterized protei 98.2 1.6E-05 3.4E-10 66.6 9.4 107 147-256 47-177 (288)
152 PF05577 Peptidase_S28: Serine 98.1 5.3E-05 1.1E-09 69.7 13.4 112 145-256 29-149 (434)
153 PF05057 DUF676: Putative seri 98.1 1.2E-05 2.6E-10 67.1 8.2 92 145-239 4-97 (217)
154 KOG3847 Phospholipase A2 (plat 98.1 1.4E-05 2.9E-10 68.9 8.4 106 145-252 118-272 (399)
155 COG3243 PhaC Poly(3-hydroxyalk 98.1 1.4E-05 3.1E-10 71.4 8.5 116 135-256 97-218 (445)
156 PF03583 LIP: Secretory lipase 98.0 4.3E-05 9.3E-10 66.6 9.3 88 164-257 17-115 (290)
157 COG1075 LipA Predicted acetylt 98.0 2.3E-05 5.1E-10 69.7 7.8 98 147-254 61-163 (336)
158 KOG2112 Lysophospholipase [Lip 97.9 6.2E-05 1.3E-09 61.4 8.3 109 145-255 3-128 (206)
159 COG0627 Predicted esterase [Ge 97.9 5.7E-05 1.2E-09 66.4 8.4 110 145-257 54-189 (316)
160 KOG3043 Predicted hydrolase re 97.9 3E-05 6.6E-10 63.8 6.0 105 146-253 40-152 (242)
161 PRK04940 hypothetical protein; 97.9 0.00016 3.5E-09 58.2 9.8 34 220-256 60-93 (180)
162 PF02450 LCAT: Lecithin:choles 97.9 8.7E-05 1.9E-09 67.4 9.3 83 161-255 66-160 (389)
163 KOG2183 Prolylcarboxypeptidase 97.9 0.00018 4E-09 64.2 10.8 108 147-254 82-202 (492)
164 smart00824 PKS_TE Thioesterase 97.8 0.00023 4.9E-09 57.6 10.8 83 162-253 15-100 (212)
165 PF03959 FSH1: Serine hydrolas 97.8 0.00012 2.7E-09 60.7 9.3 104 145-255 4-145 (212)
166 COG2819 Predicted hydrolase of 97.8 0.00061 1.3E-08 57.9 13.2 60 198-257 114-174 (264)
167 KOG4840 Predicted hydrolases o 97.7 9E-05 2E-09 61.0 6.7 107 145-257 36-146 (299)
168 KOG4388 Hormone-sensitive lipa 97.7 0.00037 7.9E-09 64.7 9.9 102 145-254 396-507 (880)
169 PF00450 Peptidase_S10: Serine 97.6 0.0011 2.4E-08 60.3 12.3 138 117-256 10-182 (415)
170 KOG3975 Uncharacterized conser 97.6 0.0047 1E-07 51.9 14.7 105 145-254 29-146 (301)
171 PLN02633 palmitoyl protein thi 97.6 0.0012 2.5E-08 57.5 11.1 100 147-254 27-130 (314)
172 PF07082 DUF1350: Protein of u 97.5 0.0013 2.8E-08 55.4 10.7 102 145-252 17-122 (250)
173 PLN02606 palmitoyl-protein thi 97.5 0.001 2.2E-08 57.7 10.3 100 147-254 28-131 (306)
174 KOG3724 Negative regulator of 97.4 0.00098 2.1E-08 63.9 9.8 89 146-239 90-201 (973)
175 COG3150 Predicted esterase [Ge 97.4 0.0012 2.7E-08 52.1 8.7 85 148-249 2-86 (191)
176 PF11144 DUF2920: Protein of u 97.4 0.0048 1E-07 55.6 13.6 125 129-254 20-218 (403)
177 PF02089 Palm_thioest: Palmito 97.4 0.00027 5.9E-09 60.7 5.2 103 147-254 7-115 (279)
178 KOG2182 Hydrolytic enzymes of 97.3 0.0027 5.8E-08 58.2 10.9 110 145-254 86-206 (514)
179 KOG2541 Palmitoyl protein thio 97.3 0.0031 6.6E-08 53.5 10.5 99 147-253 25-126 (296)
180 PF07519 Tannase: Tannase and 97.1 0.0071 1.5E-07 56.4 11.4 130 124-257 8-152 (474)
181 PLN02209 serine carboxypeptida 97.1 0.0052 1.1E-07 56.6 10.4 129 127-256 50-213 (437)
182 cd00741 Lipase Lipase. Lipase 96.9 0.003 6.4E-08 49.4 6.4 54 198-253 8-65 (153)
183 COG2382 Fes Enterochelin ester 96.9 0.0061 1.3E-07 52.7 8.3 121 131-256 82-213 (299)
184 PF04083 Abhydro_lipase: Parti 96.8 0.0044 9.5E-08 41.1 5.8 48 114-161 8-59 (63)
185 PLN02517 phosphatidylcholine-s 96.8 0.0033 7.3E-08 59.1 7.0 89 162-254 158-262 (642)
186 PLN03016 sinapoylglucose-malat 96.8 0.026 5.6E-07 52.0 12.6 140 117-256 36-211 (433)
187 PF11339 DUF3141: Protein of u 96.7 0.025 5.4E-07 52.4 11.7 101 145-255 69-175 (581)
188 PF11288 DUF3089: Protein of u 96.7 0.0052 1.1E-07 50.6 6.7 68 173-241 45-116 (207)
189 KOG2551 Phospholipase/carboxyh 96.7 0.012 2.7E-07 48.6 8.5 106 145-256 5-148 (230)
190 PF08840 BAAT_C: BAAT / Acyl-C 96.6 0.0071 1.5E-07 50.3 6.6 41 202-242 4-44 (213)
191 COG3946 VirJ Type IV secretory 96.6 0.018 3.8E-07 51.7 9.3 87 145-240 260-346 (456)
192 KOG1516 Carboxylesterase and r 96.5 0.012 2.6E-07 55.7 8.5 106 131-239 97-214 (545)
193 KOG1282 Serine carboxypeptidas 96.5 0.066 1.4E-06 49.4 12.7 143 115-257 41-215 (454)
194 KOG2369 Lecithin:cholesterol a 96.4 0.0097 2.1E-07 54.3 6.9 75 161-243 125-205 (473)
195 KOG3967 Uncharacterized conser 96.4 0.055 1.2E-06 44.6 10.5 102 145-251 101-223 (297)
196 cd00519 Lipase_3 Lipase (class 96.4 0.0061 1.3E-07 51.0 5.2 57 197-255 107-168 (229)
197 PF01764 Lipase_3: Lipase (cla 96.1 0.013 2.7E-07 44.8 5.3 37 202-240 48-84 (140)
198 PF11187 DUF2974: Protein of u 96.0 0.019 4.1E-07 48.1 6.2 48 203-253 70-122 (224)
199 PF06259 Abhydrolase_8: Alpha/ 96.0 0.35 7.7E-06 39.0 13.2 56 197-253 87-142 (177)
200 PF05576 Peptidase_S37: PS-10 95.8 0.03 6.5E-07 50.5 6.9 104 145-254 63-169 (448)
201 TIGR03712 acc_sec_asp2 accesso 95.8 0.086 1.9E-06 48.6 9.9 123 122-257 269-392 (511)
202 PF01083 Cutinase: Cutinase; 95.8 0.021 4.6E-07 46.1 5.5 75 174-253 40-120 (179)
203 PF05705 DUF829: Eukaryotic pr 95.5 0.12 2.5E-06 43.5 9.3 100 148-254 2-111 (240)
204 PLN02454 triacylglycerol lipas 95.1 0.073 1.6E-06 48.4 7.0 42 199-240 207-248 (414)
205 COG2939 Carboxypeptidase C (ca 95.0 0.07 1.5E-06 49.3 6.5 111 144-255 100-236 (498)
206 PLN02408 phospholipase A1 94.2 0.09 1.9E-06 47.1 5.3 40 201-240 181-220 (365)
207 PLN02571 triacylglycerol lipas 94.2 0.093 2E-06 47.7 5.4 39 202-240 208-246 (413)
208 KOG3253 Predicted alpha/beta h 94.2 0.15 3.3E-06 48.1 6.8 101 145-252 176-283 (784)
209 KOG1283 Serine carboxypeptidas 94.1 1.1 2.4E-05 39.4 11.4 127 127-255 12-166 (414)
210 PLN02324 triacylglycerol lipas 93.4 0.15 3.2E-06 46.4 5.2 40 200-239 195-234 (415)
211 PLN02162 triacylglycerol lipas 93.0 0.34 7.4E-06 44.7 7.0 22 218-239 276-297 (475)
212 PLN02802 triacylglycerol lipas 92.8 0.19 4.1E-06 46.8 5.1 39 202-240 312-350 (509)
213 COG4947 Uncharacterized protei 92.7 0.34 7.5E-06 38.7 5.7 56 200-257 83-138 (227)
214 PF04301 DUF452: Protein of un 92.7 0.24 5.2E-06 41.1 5.1 75 146-252 12-87 (213)
215 PLN02213 sinapoylglucose-malat 92.4 0.78 1.7E-05 40.5 8.3 83 174-256 2-97 (319)
216 PF05277 DUF726: Protein of un 92.3 0.46 1E-05 42.4 6.7 39 218-256 218-261 (345)
217 PLN02310 triacylglycerol lipas 92.3 0.26 5.7E-06 44.7 5.3 21 220-240 209-229 (405)
218 PF06441 EHN: Epoxide hydrolas 92.1 0.38 8.3E-06 35.7 5.1 37 122-160 71-107 (112)
219 PLN02761 lipase class 3 family 92.0 0.29 6.2E-06 45.7 5.2 39 201-239 271-313 (527)
220 PLN00413 triacylglycerol lipas 92.0 0.27 5.8E-06 45.5 4.9 22 218-239 282-303 (479)
221 PLN02753 triacylglycerol lipas 91.9 0.29 6.2E-06 45.8 5.1 39 201-239 290-331 (531)
222 PLN02934 triacylglycerol lipas 91.7 0.3 6.5E-06 45.5 5.0 35 203-239 306-340 (515)
223 PLN03037 lipase class 3 family 91.7 0.33 7.1E-06 45.4 5.2 21 220-240 318-338 (525)
224 KOG1202 Animal-type fatty acid 90.9 1.1 2.4E-05 46.0 8.1 93 145-253 2123-2217(2376)
225 PLN02719 triacylglycerol lipas 90.8 0.45 9.8E-06 44.4 5.2 39 201-239 276-317 (518)
226 PF08237 PE-PPE: PE-PPE domain 89.9 1.8 3.8E-05 36.4 7.7 64 173-240 2-68 (225)
227 KOG4540 Putative lipase essent 89.3 0.75 1.6E-05 39.8 5.0 37 203-241 261-297 (425)
228 COG5153 CVT17 Putative lipase 89.3 0.75 1.6E-05 39.8 5.0 37 203-241 261-297 (425)
229 KOG4569 Predicted lipase [Lipi 89.1 0.58 1.3E-05 41.7 4.4 21 219-239 170-190 (336)
230 PLN02847 triacylglycerol lipas 87.7 1.1 2.4E-05 42.6 5.4 23 218-240 249-271 (633)
231 COG4553 DepA Poly-beta-hydroxy 87.6 5.5 0.00012 34.8 9.0 112 136-257 95-211 (415)
232 PF09949 DUF2183: Uncharacteri 86.6 7.9 0.00017 28.0 8.3 84 161-250 12-97 (100)
233 COG3673 Uncharacterized conser 85.5 10 0.00022 33.6 9.6 94 145-239 31-141 (423)
234 KOG4389 Acetylcholinesterase/B 85.4 1.6 3.5E-05 40.5 5.1 101 131-237 121-235 (601)
235 COG1073 Hydrolases of the alph 84.0 2.8 6.1E-05 35.3 5.9 52 129-181 31-84 (299)
236 KOG2029 Uncharacterized conser 81.4 3.6 7.8E-05 39.2 5.7 40 200-239 506-545 (697)
237 KOG4372 Predicted alpha/beta h 80.2 1.9 4E-05 39.1 3.3 19 220-238 150-168 (405)
238 COG0529 CysC Adenylylsulfate k 80.1 18 0.00039 29.3 8.5 45 145-189 22-69 (197)
239 PF06309 Torsin: Torsin; Inte 76.1 26 0.00056 26.6 8.0 65 143-213 50-118 (127)
240 KOG1551 Uncharacterized conser 74.6 5.6 0.00012 34.3 4.4 114 130-247 101-222 (371)
241 PF09994 DUF2235: Uncharacteri 73.2 32 0.0007 29.6 9.1 38 201-239 74-111 (277)
242 COG1073 Hydrolases of the alph 71.2 0.055 1.2E-06 45.9 -8.6 91 145-239 88-179 (299)
243 PF06792 UPF0261: Uncharacteri 68.6 75 0.0016 29.1 10.5 96 150-247 5-122 (403)
244 KOG2521 Uncharacterized conser 68.0 27 0.00059 31.3 7.5 88 147-238 40-127 (350)
245 PRK02399 hypothetical protein; 67.7 98 0.0021 28.4 11.0 97 149-247 6-124 (406)
246 COG2830 Uncharacterized protei 66.2 9.4 0.0002 30.4 3.8 66 147-242 13-79 (214)
247 KOG2385 Uncharacterized conser 65.1 18 0.00038 34.1 5.9 40 218-257 445-489 (633)
248 PF08484 Methyltransf_14: C-me 62.7 25 0.00055 27.7 5.8 48 199-250 52-99 (160)
249 COG0552 FtsY Signal recognitio 61.6 86 0.0019 28.0 9.3 88 154-250 202-291 (340)
250 PF03283 PAE: Pectinacetyleste 60.6 10 0.00023 34.1 3.6 39 201-239 137-175 (361)
251 PF12242 Eno-Rase_NADH_b: NAD( 59.7 26 0.00056 24.1 4.5 45 197-241 16-61 (78)
252 COG3340 PepE Peptidase E [Amin 59.4 18 0.0004 30.0 4.5 37 145-181 32-70 (224)
253 cd03818 GT1_ExpC_like This fam 56.6 78 0.0017 28.3 8.7 37 148-187 2-38 (396)
254 COG2240 PdxK Pyridoxal/pyridox 54.2 1.5E+02 0.0032 25.8 9.7 94 151-256 11-114 (281)
255 KOG1532 GTPase XAB1, interacts 53.3 1.3E+02 0.0028 26.4 8.7 37 145-181 18-55 (366)
256 PF12590 Acyl-thio_N: Acyl-ATP 51.8 4.4 9.5E-05 30.3 -0.2 16 16-31 83-98 (129)
257 PF01583 APS_kinase: Adenylyls 51.1 26 0.00057 27.5 4.1 36 145-180 1-37 (156)
258 KOG0781 Signal recognition par 49.1 51 0.0011 31.0 6.0 87 149-250 442-537 (587)
259 PRK12467 peptide synthase; Pro 44.9 1E+02 0.0022 36.9 9.0 86 145-240 3692-3777(3956)
260 COG3727 Vsr DNA G:T-mismatch r 44.5 49 0.0011 25.3 4.4 14 166-179 101-114 (150)
261 COG4822 CbiK Cobalamin biosynt 44.1 1.2E+02 0.0025 25.5 6.8 40 145-184 138-178 (265)
262 PRK05282 (alpha)-aspartyl dipe 44.0 1.7E+02 0.0037 24.6 8.2 38 145-182 31-70 (233)
263 COG0541 Ffh Signal recognition 40.0 2.2E+02 0.0047 26.5 8.5 72 164-250 173-246 (451)
264 PF10081 Abhydrolase_9: Alpha/ 37.6 2.8E+02 0.0061 24.2 10.3 37 219-255 108-147 (289)
265 TIGR02069 cyanophycinase cyano 36.9 2.5E+02 0.0054 23.8 8.2 38 145-182 28-66 (250)
266 PF07897 DUF1675: Protein of u 35.4 69 0.0015 27.9 4.5 35 126-161 233-267 (284)
267 cd03145 GAT1_cyanophycinase Ty 33.0 2.1E+02 0.0045 23.6 7.0 36 147-182 31-67 (217)
268 cd07224 Pat_like Patatin-like 32.8 68 0.0015 26.8 4.1 35 206-241 16-50 (233)
269 PRK13230 nitrogenase reductase 32.4 96 0.0021 26.4 5.1 40 147-187 3-43 (279)
270 COG5441 Uncharacterized conser 32.4 3.6E+02 0.0078 23.9 9.1 95 148-244 4-117 (401)
271 TIGR02884 spore_pdaA delta-lac 31.8 60 0.0013 26.9 3.6 35 146-180 187-221 (224)
272 PF01656 CbiA: CobQ/CobB/MinD/ 31.5 68 0.0015 25.2 3.8 34 149-182 2-36 (195)
273 COG1448 TyrB Aspartate/tyrosin 31.5 3E+02 0.0065 25.1 7.9 85 145-253 171-263 (396)
274 cd03146 GAT1_Peptidase_E Type 31.5 2.8E+02 0.0061 22.6 7.5 38 145-182 31-69 (212)
275 KOG2170 ATPase of the AAA+ sup 30.7 75 0.0016 28.1 3.9 31 143-173 107-138 (344)
276 PF10686 DUF2493: Protein of u 30.6 1E+02 0.0023 20.6 3.9 37 146-185 32-71 (71)
277 TIGR02690 resist_ArsH arsenica 29.9 3.3E+02 0.0071 22.7 11.1 86 145-230 26-139 (219)
278 PF04763 DUF562: Protein of un 29.1 2E+02 0.0044 22.1 5.5 39 145-183 17-61 (146)
279 KOG1252 Cystathionine beta-syn 28.8 4.3E+02 0.0094 23.8 8.6 36 146-183 212-249 (362)
280 PF03575 Peptidase_S51: Peptid 28.7 1.1E+02 0.0025 23.5 4.5 22 162-183 2-23 (154)
281 cd07198 Patatin Patatin-like p 28.6 81 0.0018 24.7 3.7 21 221-241 27-47 (172)
282 KOG2872 Uroporphyrinogen decar 27.9 73 0.0016 27.9 3.4 71 145-228 252-336 (359)
283 PRK14974 cell division protein 27.9 4.4E+02 0.0095 23.5 8.6 67 169-250 218-286 (336)
284 cd07207 Pat_ExoU_VipD_like Exo 27.6 98 0.0021 24.6 4.1 20 222-241 29-48 (194)
285 PF13207 AAA_17: AAA domain; P 27.0 69 0.0015 23.0 2.9 74 148-226 1-77 (121)
286 cd05312 NAD_bind_1_malic_enz N 26.8 1.1E+02 0.0023 26.7 4.3 81 148-238 27-124 (279)
287 PF00326 Peptidase_S9: Prolyl 26.7 2.7E+02 0.0059 22.2 6.7 41 145-185 144-188 (213)
288 TIGR02764 spore_ybaN_pdaB poly 26.2 65 0.0014 25.7 2.8 33 147-180 153-188 (191)
289 PRK07933 thymidylate kinase; V 25.9 1.5E+02 0.0033 24.3 5.0 40 148-187 2-42 (213)
290 cd01983 Fer4_NifH The Fer4_Nif 25.6 1.6E+02 0.0034 19.5 4.4 22 159-180 13-34 (99)
291 PF02230 Abhydrolase_2: Phosph 25.3 1.1E+02 0.0025 24.7 4.1 57 146-210 156-214 (216)
292 PF08057 Ery_res_leader2: Eryt 25.0 31 0.00068 15.1 0.4 10 1-10 1-10 (14)
293 PF05724 TPMT: Thiopurine S-me 24.5 82 0.0018 26.1 3.1 29 147-181 39-67 (218)
294 PF03205 MobB: Molybdopterin g 24.4 1.4E+02 0.0031 22.7 4.2 41 148-188 2-43 (140)
295 cd07212 Pat_PNPLA9 Patatin-lik 23.5 65 0.0014 28.3 2.4 18 223-240 35-52 (312)
296 PF10605 3HBOH: 3HB-oligomer h 23.4 7.1E+02 0.015 24.4 13.3 36 222-257 287-323 (690)
297 PF08433 KTI12: Chromatin asso 23.1 2.5E+02 0.0055 24.1 6.0 66 148-213 3-69 (270)
298 PRK13256 thiopurine S-methyltr 22.9 78 0.0017 26.5 2.7 28 148-181 46-73 (226)
299 PRK13690 hypothetical protein; 22.9 1.7E+02 0.0037 23.6 4.3 32 197-228 3-34 (184)
300 PRK05579 bifunctional phosphop 22.9 5.9E+02 0.013 23.3 9.7 56 165-227 138-196 (399)
301 cd07210 Pat_hypo_W_succinogene 22.6 1.4E+02 0.003 24.8 4.1 21 221-241 29-49 (221)
302 PRK00889 adenylylsulfate kinas 22.3 1.8E+02 0.0038 22.7 4.6 37 145-181 3-40 (175)
303 PF10142 PhoPQ_related: PhoPQ- 21.7 6.1E+02 0.013 23.0 12.7 36 215-251 167-202 (367)
304 cd03129 GAT1_Peptidase_E_like 21.6 4.4E+02 0.0095 21.3 7.1 35 147-181 31-65 (210)
305 cd07225 Pat_PNPLA6_PNPLA7 Pata 21.2 1.3E+02 0.0028 26.4 3.9 19 222-240 45-63 (306)
306 TIGR03709 PPK2_rel_1 polyphosp 21.1 96 0.0021 26.7 2.9 38 145-182 55-93 (264)
307 TIGR03131 malonate_mdcH malona 21.1 1.1E+02 0.0024 26.2 3.4 19 220-238 76-94 (295)
308 PRK10279 hypothetical protein; 20.9 1.3E+02 0.0028 26.4 3.8 20 221-240 34-53 (300)
309 PRK10867 signal recognition pa 20.9 6.8E+02 0.015 23.2 9.2 69 167-250 177-247 (433)
310 smart00827 PKS_AT Acyl transfe 20.7 1.1E+02 0.0024 26.1 3.4 19 220-238 82-100 (298)
311 cd07209 Pat_hypo_Ecoli_Z1214_l 20.7 1.4E+02 0.003 24.5 3.7 22 221-242 27-48 (215)
312 cd07228 Pat_NTE_like_bacteria 20.5 1.6E+02 0.0034 23.2 3.9 21 221-241 29-49 (175)
313 cd02036 MinD Bacterial cell di 20.4 1.8E+02 0.0038 22.4 4.2 34 149-182 3-37 (179)
314 PF11713 Peptidase_C80: Peptid 20.4 34 0.00073 26.9 -0.0 37 196-232 78-116 (157)
315 cd02040 NifH NifH gene encodes 20.3 2.1E+02 0.0046 23.9 4.9 39 148-187 4-43 (270)
No 1
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=2.2e-29 Score=224.41 Aligned_cols=192 Identities=68% Similarity=1.208 Sum_probs=172.7
Q ss_pred cccCCccCCChhhhHHHhcCCCcchhhHHHhhhhhhhhccccccccccCCCCceeeEEEEeCCCCcEEEEEEeecCCCCC
Q 025045 64 EINSPIEGVSDDLNLIASRNLDFAYTRRKVRSAFTQVQLQLDHCLFTMAPSGIRTQEWYERNSKGLEIFCKSWMPKLGDQ 143 (258)
Q Consensus 64 ~~~~~i~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~ 143 (258)
.....+++.+++++.++..+++..+.+++.+.+|...++.+++..+...+.++..++++..+++|.++++..|.|.++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~ 86 (349)
T PLN02385 7 KAPSAIEGVSEELNRILDANLDEAPARRRARDAFKDIQLQLDHCLFKTPPSGIKTEESYEVNSRGVEIFSKSWLPENSRP 86 (349)
T ss_pred cCcccccccccHHHHHHHHHhhhhhhhchhhhhcccccccccchhhccCccCcceeeeeEEcCCCCEEEEEEEecCCCCC
Confidence 44667899999999999999999999999999999999999999999999999999999999999999999999876554
Q ss_pred cceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE
Q 025045 144 IKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCF 223 (258)
Q Consensus 144 ~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~ 223 (258)
+++|||+||++++...++..+++.|+++||+|+++|+||||.|++...+..+++.+++|+.++++.+......+..+++
T Consensus 87 -~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 87 -KAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred -CeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 7899999999988666677888999889999999999999999886555568899999999999998765445566899
Q ss_pred EEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 224 ILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 224 l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
|+||||||++++.++.++|++++++|+++|++.
T Consensus 166 LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred EEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 999999999999999999999999999999764
No 2
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=5.2e-25 Score=186.10 Aligned_cols=148 Identities=47% Similarity=0.940 Sum_probs=135.5
Q ss_pred cCCCCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCC
Q 025045 111 MAPSGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGL 190 (258)
Q Consensus 111 ~~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~ 190 (258)
....++.....++.+.+|..++++.|.|..+.+++..|+++||++++....+..++..|+.+||.|+++|++|||.|+|.
T Consensus 20 ~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl 99 (313)
T KOG1455|consen 20 YGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL 99 (313)
T ss_pred cCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC
Confidence 34467778889999999999999999997754448899999999998866688899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCCC
Q 025045 191 HGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKKK 258 (258)
Q Consensus 191 ~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l~ 258 (258)
..+.++++..++|+..+++.+..+.+....+.+++||||||++++.++.++|+.++|+|+++|++.++
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKIS 167 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccC
Confidence 99999999999999999999988877788899999999999999999999999999999999999763
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=3.2e-23 Score=183.22 Aligned_cols=143 Identities=40% Similarity=0.869 Sum_probs=118.7
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGY 193 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~ 193 (258)
.++..+..++...||.+++|+.|.|....+.+++|||+||++.+....+..++..|+++||+|+++|+||||.|.+....
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 107 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAY 107 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcccc
Confidence 34445566778889999999999886532337899999999866543466678889899999999999999999876555
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 194 VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 194 ~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
..+++.+++|+.++++++......+..+++|+||||||++++.++.++|++++++|+++|+.+
T Consensus 108 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 108 VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 568889999999999999865444556899999999999999999999999999999999764
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=99.87 E-value=5.9e-21 Score=164.28 Aligned_cols=130 Identities=32% Similarity=0.592 Sum_probs=109.2
Q ss_pred EEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHH
Q 025045 122 YERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALV 201 (258)
Q Consensus 122 ~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~ 201 (258)
++.+.||..++|+.|.|.. .+ +++|+++||++++... |..+++.|++.||.|+++|+||||.|++......++..++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-~~-~~~v~llHG~~~~~~~-~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-YP-KALVFISHGAGEHSGR-YEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eeecCCCCEEEEEeccCCC-CC-CEEEEEeCCCccccch-HHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 4578899999999998853 33 6888888999887665 6779999999999999999999999986543345777888
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+|+.+.++.+... ....+++++||||||.+++.++.++|+.++++|+++|+.+
T Consensus 81 ~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 81 RDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 9999999887653 2345899999999999999999999999999999999754
No 5
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.85 E-value=3.8e-20 Score=161.39 Aligned_cols=135 Identities=34% Similarity=0.567 Sum_probs=118.5
Q ss_pred eeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCC-CCCCCCCC
Q 025045 118 TQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSE-GLHGYVPS 196 (258)
Q Consensus 118 ~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~-~~~~~~~~ 196 (258)
..+.++...||..++|..|.+.... +.+||++||++.+... +..++..|..+||.|+++|+||||.|. +..+...+
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~--~g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPP--KGVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCC--CcEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 4556678899999999999776443 4699999999988765 566899999999999999999999998 77777778
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
++++.+|+.++++.+... ....+++++||||||.+++.++.+++..++++||.+|++.+
T Consensus 86 f~~~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 86 FADYVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred HHHHHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 999999999999999864 24668999999999999999999999999999999999876
No 6
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.84 E-value=1.4e-19 Score=163.58 Aligned_cols=141 Identities=35% Similarity=0.725 Sum_probs=118.9
Q ss_pred CCCCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCC
Q 025045 112 APSGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLH 191 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~ 191 (258)
..+|......++...++..++++.|.|..+++ +++||++||++++... +..+++.|+++||+|+++|+||||.|++..
T Consensus 104 ~~~g~~~~~~~~~~~~~~~l~~~~~~p~~~~~-~~~Vl~lHG~~~~~~~-~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~ 181 (395)
T PLN02652 104 DGEGTRWATSLFYGARRNALFCRSWAPAAGEM-RGILIIIHGLNEHSGR-YLHFAKQLTSCGFGVYAMDWIGHGGSDGLH 181 (395)
T ss_pred cCCCceEEEEEEECCCCCEEEEEEecCCCCCC-ceEEEEECCchHHHHH-HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 34666778888889999999999999976555 7899999999887554 677899999999999999999999999876
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCC---CcccEEEEECcCCCC
Q 025045 192 GYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEP---RAWDGVILVAPMCKK 257 (258)
Q Consensus 192 ~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p---~~v~~vvl~~p~~~l 257 (258)
.+..+++.+.+|+.++++++... .+..+++++||||||.+++.++. +| ++++++|+.+|..++
T Consensus 182 ~~~~~~~~~~~Dl~~~l~~l~~~--~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 182 GYVPSLDYVVEDTEAFLEKIRSE--NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRV 247 (395)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHh--CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccc
Confidence 66668889999999999999864 23458999999999999998775 55 479999999998654
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=99.84 E-value=1.6e-19 Score=159.81 Aligned_cols=132 Identities=23% Similarity=0.325 Sum_probs=108.4
Q ss_pred eEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-----C
Q 025045 119 QEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-----Y 193 (258)
Q Consensus 119 ~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-----~ 193 (258)
++..+...+|..++|..|.+. .+ +++||++||++++... +..++..+++.||+|+++|+||||.|+.... .
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~--~~-~~~vll~HG~~~~~~~-y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP--HH-DRVVVICPGRIESYVK-YAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC--CC-CcEEEEECCccchHHH-HHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 345556788999999999764 22 5689999999887654 5567888889999999999999999975421 2
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 194 VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 194 ~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
..+++++++|+.++++.+... .+..+++++||||||.+++.++.++|+.++++|+++|...
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 247889999999999987543 2356899999999999999999999999999999999764
No 8
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.83 E-value=2.6e-19 Score=153.30 Aligned_cols=126 Identities=21% Similarity=0.304 Sum_probs=102.4
Q ss_pred CCCcEEEEEEeecCCCCCcceEEEEEcCCCCCcc---chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHH
Q 025045 126 SKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCT---FFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVD 202 (258)
Q Consensus 126 ~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~---~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~ 202 (258)
.....+++..+.|....+ +++||++||+++... ..+..+++.|++.||.|+.+|+||||.|.+.... .+++.+++
T Consensus 7 ~~~g~~~~~~~~p~~~~~-~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~~~ 84 (266)
T TIGR03101 7 APHGFRFCLYHPPVAVGP-RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVWKE 84 (266)
T ss_pred CCCCcEEEEEecCCCCCC-ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHHHH
Confidence 333456677777765555 789999999986432 2356678899999999999999999999875432 47888999
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 203 NVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 203 dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
|+..+++++... +..+++++||||||.+++.++.++|++++++|+++|+++
T Consensus 85 Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 85 DVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999998764 345899999999999999999999999999999999875
No 9
>PRK13604 luxD acyl transferase; Provisional
Probab=99.79 E-value=2.7e-18 Score=148.56 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=105.5
Q ss_pred eEEEEeCCCCcEEEEEEeecCCC-CCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCC-CCCCCCCCCCCC
Q 025045 119 QEWYERNSKGLEIFCKSWMPKLG-DQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGF-GLSEGLHGYVPS 196 (258)
Q Consensus 119 ~~~~~~~~~g~~i~~~~~~p~~~-~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~-G~S~~~~~~~~~ 196 (258)
.+.+....||..|..+...|.+. .++.++||++||+++... ++..+++.|+++||+|+.+|+||+ |.|++.... .+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~t 87 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-FT 87 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-Cc
Confidence 34455778899999998888632 223689999999998764 478899999999999999999988 999875432 23
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.....+|+.++++|+..+ +..+|+|+||||||.+++..|... .++++|++||+.++
T Consensus 88 ~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l 143 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL 143 (307)
T ss_pred ccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH
Confidence 334578999999999875 346899999999999997777633 49999999999874
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=3.7e-18 Score=149.05 Aligned_cols=115 Identities=17% Similarity=0.219 Sum_probs=94.4
Q ss_pred cEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 025045 129 LEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDALVDNVIEI 207 (258)
Q Consensus 129 ~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~~~~dl~~~ 207 (258)
.+++|..++.. ..++|||+||++++... |..+.+.|.+.||+|+++|+||||.|+.+.. ..++++++++|+.++
T Consensus 34 ~~i~y~~~G~~----~~~~lvliHG~~~~~~~-w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~ 108 (302)
T PRK00870 34 LRMHYVDEGPA----DGPPVLLLHGEPSWSYL-YRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSW 108 (302)
T ss_pred EEEEEEecCCC----CCCEEEEECCCCCchhh-HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 46776654321 14589999999887665 6778899988899999999999999976532 235788999999999
Q ss_pred HHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 208 YTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 208 l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
++.+.. ++++++||||||.+++.++.++|++++++|++++.
T Consensus 109 l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 109 FEQLDL------TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHcCC------CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 987653 37999999999999999999999999999999874
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=4e-18 Score=148.12 Aligned_cols=118 Identities=25% Similarity=0.424 Sum_probs=97.6
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC------CCCCHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG------YVPSFD 198 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~------~~~~~~ 198 (258)
+.+|..++|...++ + .++|||+||++++... |..+...|++. |+|+++|+||||.|+.... ..++++
T Consensus 14 ~~~~~~i~y~~~G~----~-~~~vlllHG~~~~~~~-w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~ 86 (294)
T PLN02824 14 RWKGYNIRYQRAGT----S-GPALVLVHGFGGNADH-WRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFE 86 (294)
T ss_pred EEcCeEEEEEEcCC----C-CCeEEEECCCCCChhH-HHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHH
Confidence 34677888876532 2 3579999999988765 66788888766 7999999999999986532 246889
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 199 ALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 199 ~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
++++|+.++++.+.. ++++++||||||.+++.++.++|++|+++|+++|..
T Consensus 87 ~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 87 TWGEQLNDFCSDVVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHhcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 999999999998764 379999999999999999999999999999998753
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.78 E-value=4.3e-18 Score=146.68 Aligned_cols=120 Identities=21% Similarity=0.207 Sum_probs=97.6
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDN 203 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~d 203 (258)
...+|.+++|..+...++ .++|||+||++++... |..+.+.|.+ +|+|+++|+||||.|+.+.. ..+++.+++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~---~~plvllHG~~~~~~~-w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 7 IDLDGQSIRTAVRPGKEG---LTPLLIFNGIGANLEL-VFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred eccCCcEEEEEEecCCCC---CCcEEEEeCCCcchHH-HHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 345778888876532211 3579999999988775 6677788754 69999999999999986533 3578899999
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 204 VIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 204 l~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+.++++.+... +++|+||||||.+++.+|.++|++++++|++++..
T Consensus 81 ~~~~i~~l~~~------~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 81 AARMLDYLDYG------QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred HHHHHHHhCcC------ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 99999997533 79999999999999999999999999999998765
No 13
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.77 E-value=3.5e-18 Score=151.49 Aligned_cols=130 Identities=32% Similarity=0.575 Sum_probs=103.2
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccc-hH------------------------HHHHHHHHHCCcEEEE
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTF-FF------------------------EGIARYIAASGYGVYA 178 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~-~~------------------------~~~~~~l~~~G~~V~~ 178 (258)
.+.||..|+++.|.|. ++ +.+|+++||++++... +. ..+++.|.++||.|++
T Consensus 3 ~~~~g~~l~~~~~~~~--~~-kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVK--NA-IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred cCCCCCeEEEeeeecc--CC-eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 5678999999999875 34 7899999999988652 11 4578999999999999
Q ss_pred ECCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHcCC-----------------CCC-CCCEEEEEcchHHHHHHHH
Q 025045 179 LDHPGFGLSEGLH---GYVPSFDALVDNVIEIYTKIKGRP-----------------ELQ-GLPCFILGQSMGGAVTIKA 237 (258)
Q Consensus 179 ~D~rG~G~S~~~~---~~~~~~~~~~~dl~~~l~~l~~~~-----------------~~~-~~~i~l~G~S~Gg~ia~~~ 237 (258)
+|+||||.|.+.. +...+++++++|+.++++.+.... ... ..+++|+||||||++++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 9999999998642 233478899999999999876410 112 4689999999999999999
Q ss_pred HHhCCC--------cccEEEEECcCCC
Q 025045 238 HLKEPR--------AWDGVILVAPMCK 256 (258)
Q Consensus 238 a~~~p~--------~v~~vvl~~p~~~ 256 (258)
+.++++ .++++|+.+|++.
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHhccccccccccccceEEEeccceE
Confidence 876532 5899999998764
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.77 E-value=7.8e-18 Score=154.86 Aligned_cols=124 Identities=23% Similarity=0.363 Sum_probs=98.1
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHH---HCCcEEEEECCCCCCCCCCCCCCCCCHHHHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIA---ASGYGVYALDHPGFGLSEGLHGYVPSFDALV 201 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~---~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~ 201 (258)
+.+|..++|....|.++.. +++|||+||++++...|...+...+. +.+|+|+++|+||||.|+.+....+++++++
T Consensus 182 ~~~~~~l~~~~~gp~~~~~-k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a 260 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKA-KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHL 260 (481)
T ss_pred eeCCeEEEEEEecCCCCCC-CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHH
Confidence 3445799999998876443 67899999999887654333444444 3689999999999999987644446788888
Q ss_pred HHHH-HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 202 DNVI-EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 202 ~dl~-~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+|+. .+++.+. .++++++||||||.+++.++.++|++++++|+++|..
T Consensus 261 ~~l~~~ll~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 261 EMIERSVLERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 8884 6666654 3379999999999999999999999999999998753
No 15
>PLN02965 Probable pheophorbidase
Probab=99.77 E-value=5.4e-18 Score=144.52 Aligned_cols=103 Identities=21% Similarity=0.270 Sum_probs=88.5
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
-+|||+||++.+... |..+...|.+.||+|+++|+||||.|+......++++.+++|+.++++.+.. .++++++
T Consensus 4 ~~vvllHG~~~~~~~-w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~lv 77 (255)
T PLN02965 4 IHFVFVHGASHGAWC-WYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP-----DHKVILV 77 (255)
T ss_pred eEEEEECCCCCCcCc-HHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC-----CCCEEEE
Confidence 359999999987665 6778888988899999999999999976544446789999999999998652 1379999
Q ss_pred EcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 226 GQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
||||||.+++.++.++|++|+++|++++.
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 99999999999999999999999998864
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.76 E-value=6.7e-18 Score=141.92 Aligned_cols=115 Identities=17% Similarity=0.319 Sum_probs=93.2
Q ss_pred EEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 025045 132 FCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKI 211 (258)
Q Consensus 132 ~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l 211 (258)
+|..+.+... . .|+||++||++++... |..+...+. .+|+|+++|+||||.|........+++++++|+.++++++
T Consensus 2 ~~~~~~~~~~-~-~~~iv~lhG~~~~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 2 HYELHGPPDA-D-APVVVLSSGLGGSGSY-WAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred EEEEecCCCC-C-CCEEEEEcCCCcchhH-HHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4556654322 2 6789999999988765 556667664 5799999999999999876555568899999999999876
Q ss_pred HcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 212 KGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 212 ~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
.. .+++++||||||.+++.++.++|++++++|+++++..
T Consensus 78 ~~------~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 78 NI------ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSR 116 (257)
T ss_pred CC------CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCC
Confidence 53 3799999999999999999999999999999988654
No 17
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.76 E-value=2.7e-17 Score=149.79 Aligned_cols=135 Identities=17% Similarity=0.217 Sum_probs=106.8
Q ss_pred eeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCC
Q 025045 117 RTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPS 196 (258)
Q Consensus 117 ~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~ 196 (258)
.++...+...+|..+.+..+.|....+ .|+||++||+++....++..+++.+++.||+|+++|+||+|.|.+... ..+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~-~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d 244 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGP-FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQD 244 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCC-ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-ccc
Confidence 355666666777799999999874444 889998888887655556678889999999999999999999965321 112
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
. .....++++++.....++.++|+++||||||.+++.++..+|++++++|+++|+++
T Consensus 245 ~---~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 245 S---SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred H---HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 2 22335678888877777888999999999999999999999999999999998763
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=1.6e-17 Score=148.92 Aligned_cols=121 Identities=20% Similarity=0.328 Sum_probs=95.9
Q ss_pred CCc-EEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025045 127 KGL-EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVI 205 (258)
Q Consensus 127 ~g~-~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~ 205 (258)
+|. +++|...++.+..+..|+|||+||++++... |..+...|.+ +|+|+++|+||||.|+.+....++++.+++|+.
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~ 146 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHH
Confidence 455 8888877543111124689999999988665 6667777755 799999999999999876444467889999999
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH-hCCCcccEEEEECcCC
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL-KEPRAWDGVILVAPMC 255 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~-~~p~~v~~vvl~~p~~ 255 (258)
++++.+.. ++++|+||||||.+++.++. .+|++|+++|++++..
T Consensus 147 ~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 147 DFLEEVVQ------KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHhcC------CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 99997753 38999999999999998887 4799999999998753
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.76 E-value=2e-17 Score=143.77 Aligned_cols=115 Identities=16% Similarity=0.189 Sum_probs=97.5
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNV 204 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl 204 (258)
..+|.+++|..++ + .++|||+||++++... |..+++.|++.+ +|+++|+||||.|+.+.. .++++.+++|+
T Consensus 13 ~~~g~~i~y~~~G--~----g~~vvllHG~~~~~~~-w~~~~~~L~~~~-~via~D~~G~G~S~~~~~-~~~~~~~a~dl 83 (295)
T PRK03592 13 EVLGSRMAYIETG--E----GDPIVFLHGNPTSSYL-WRNIIPHLAGLG-RCLAPDLIGMGASDKPDI-DYTFADHARYL 83 (295)
T ss_pred EECCEEEEEEEeC--C----CCEEEEECCCCCCHHH-HHHHHHHHhhCC-EEEEEcCCCCCCCCCCCC-CCCHHHHHHHH
Confidence 3478889998764 1 3479999999988665 677888898775 999999999999987643 35889999999
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 205 IEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 205 ~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
.++++.+.. ++++++||||||.+++.++.++|++++++|++++.
T Consensus 84 ~~ll~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 84 DAWFDALGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred HHHHHHhCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 999998764 37999999999999999999999999999999974
No 20
>PLN02511 hydrolase
Probab=99.75 E-value=6.6e-17 Score=146.21 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=104.4
Q ss_pred ceeeEEEEeCCCCcEEEEEEeecC--CCCCcceEEEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC
Q 025045 116 IRTQEWYERNSKGLEIFCKSWMPK--LGDQIKGVLFFCHGYGDTCT-FFFEGIARYIAASGYGVYALDHPGFGLSEGLHG 192 (258)
Q Consensus 116 ~~~~~~~~~~~~g~~i~~~~~~p~--~~~~~~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~ 192 (258)
+..+...+...||..+.+..+.+. .....+|+||++||++++.. .|+..++..+.+.||+|+++|+||||.|.....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc
Confidence 445666778889988887544321 11122689999999976654 355667777778999999999999999975432
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCc--ccEEEEECcCCC
Q 025045 193 YVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRA--WDGVILVAPMCK 256 (258)
Q Consensus 193 ~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~--v~~vvl~~p~~~ 256 (258)
. .....+.+|+.++++++..+. +..+++++||||||++++.++.+++++ +++++++++..+
T Consensus 149 ~-~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 149 Q-FYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred C-EEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 2 123466789999999998752 355899999999999999999999987 888888877655
No 21
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.75 E-value=5.7e-17 Score=138.20 Aligned_cols=123 Identities=21% Similarity=0.234 Sum_probs=96.0
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCC--CCHHHHH
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYV--PSFDALV 201 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~--~~~~~~~ 201 (258)
.+.+|..+.|..+.+.+ . .++|||+||++++...++..+...+.+.||+|+++|+||||.|..+.... .+.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~--~-~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 7 ITVDGGYHLFTKTGGEG--E-KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred ecCCCCeEEEEeccCCC--C-CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 34556666666554322 2 46799999987665556777777777679999999999999998653332 5788889
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+|+.++++.+.. ++++++||||||.+++.++.++|++++++|+++++.
T Consensus 84 ~~~~~~~~~~~~------~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 84 DELEEVREKLGL------DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHHcCC------CcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 998888877653 369999999999999999999999999999988764
No 22
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.74 E-value=2.7e-17 Score=141.97 Aligned_cols=117 Identities=21% Similarity=0.307 Sum_probs=93.4
Q ss_pred CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 025045 127 KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIE 206 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~ 206 (258)
+|.++.+.. |. .. +|+|||+||++.+... |..+...|.+.||+|+++|+||||.|........+++++++++.+
T Consensus 5 ~~~~~~~~~--~~--~~-~p~vvliHG~~~~~~~-w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 5 NGEEVTDMK--PN--RQ-PPHFVLIHGISGGSWC-WYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred ccccccccc--cc--CC-CCeEEEECCCCCCcCc-HHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 455555543 21 22 5689999999988765 677888898889999999999999886543333688888888888
Q ss_pred HHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 207 IYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 207 ~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
+++.+.. .++++|+||||||.++..++.++|++++++|++++.
T Consensus 79 ~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 79 FLSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred HHHhcCC-----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 8876531 247999999999999999999999999999999774
No 23
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.73 E-value=4.1e-17 Score=138.27 Aligned_cols=112 Identities=14% Similarity=0.227 Sum_probs=90.7
Q ss_pred EEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025045 131 IFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTK 210 (258)
Q Consensus 131 i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~ 210 (258)
++|..+.+.+... +|+|||+||++++... |..+...|. .+|+|+++|+||||.|..... .+++++++|+.+++++
T Consensus 3 ~~~~~~~~~~~~~-~~~iv~lhG~~~~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 3 LNIRAQTAQNPHN-NSPIVLVHGLFGSLDN-LGVLARDLV-NDHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDA 77 (255)
T ss_pred ceeeeccCCCCCC-CCCEEEECCCCCchhH-HHHHHHHHh-hCCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHH
Confidence 4455555543333 7899999999888664 666777775 469999999999999986543 5788999999999998
Q ss_pred HHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECc
Q 025045 211 IKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAP 253 (258)
Q Consensus 211 l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p 253 (258)
+.. ++++++||||||.+++.++.++|++|+++|++++
T Consensus 78 l~~------~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~ 114 (255)
T PRK10673 78 LQI------EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_pred cCC------CceEEEEECHHHHHHHHHHHhCHhhcceEEEEec
Confidence 753 3799999999999999999999999999999753
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.73 E-value=6.9e-17 Score=138.06 Aligned_cols=119 Identities=17% Similarity=0.277 Sum_probs=96.8
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNV 204 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl 204 (258)
..+|.+++|....+.. .++|||+||++++... |..+...|++ +|+|+++|+||||.|+.+.....+++.+++|+
T Consensus 12 ~~~~~~~~~~~~g~~~----~~~vv~~hG~~~~~~~-~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 12 TVGPFHWHVQDMGPTA----GPLLLLLHGTGASTHS-WRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred eECCEEEEEEecCCCC----CCeEEEEcCCCCCHHH-HHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHH
Confidence 4577788887764322 4579999999988765 5667777754 69999999999999987655446889999999
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 205 IEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 205 ~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
.++++.+.. ++++|+||||||.+++.++.++|++++++|++++..
T Consensus 86 ~~~i~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 86 SALCAAEGL------SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred HHHHHHcCC------CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 999887542 378999999999999999999999999999988754
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.73 E-value=3.3e-17 Score=134.17 Aligned_cols=101 Identities=26% Similarity=0.508 Sum_probs=87.5
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEE
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDALVDNVIEIYTKIKGRPELQGLPCFILG 226 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G 226 (258)
|||+||++++... |..+.+.| ++||+|+++|+||+|.|+.... ...+++++++|+.++++.+.. ++++++|
T Consensus 1 vv~~hG~~~~~~~-~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI------KKVILVG 72 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT------SSEEEEE
T ss_pred eEEECCCCCCHHH-HHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc------ccccccc
Confidence 7999999999865 66688888 4899999999999999987653 235788999999999988775 3899999
Q ss_pred cchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 227 QSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 227 ~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
||+||.+++.++.++|++++++|+++|...
T Consensus 73 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred cccccccccccccccccccccceeeccccc
Confidence 999999999999999999999999999864
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.72 E-value=1.5e-16 Score=143.18 Aligned_cols=129 Identities=17% Similarity=0.285 Sum_probs=105.7
Q ss_pred CceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC--
Q 025045 115 GIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-- 192 (258)
Q Consensus 115 ~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-- 192 (258)
|+++........+|.+++|...++.+ .++|||+||++++... |..+...|++ +|+|+++|++|||.|+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~y~~~G~~~----~~~ivllHG~~~~~~~-w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~ 174 (383)
T PLN03084 101 GLKMGAQSQASSDLFRWFCVESGSNN----NPPVLLIHGFPSQAYS-YRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY 174 (383)
T ss_pred cccccceeEEcCCceEEEEEecCCCC----CCeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCcccc
Confidence 45555566667888899888764322 4579999999988665 5677788864 79999999999999987643
Q ss_pred -CCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 193 -YVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 193 -~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
..++++.+++|+.++++.+... +++|+|||+||.+++.++.++|++++++|+++|..
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l~~~------~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDELKSD------KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred cccCCHHHHHHHHHHHHHHhCCC------CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 2358899999999999988643 79999999999999999999999999999999864
No 27
>PRK06489 hypothetical protein; Provisional
Probab=99.72 E-value=1.2e-16 Score=143.25 Aligned_cols=123 Identities=22% Similarity=0.220 Sum_probs=89.6
Q ss_pred CCCcEEEEEEeecCCC---CCcceEEEEEcCCCCCccchH-HHHHHHH-------HHCCcEEEEECCCCCCCCCCCCCC-
Q 025045 126 SKGLEIFCKSWMPKLG---DQIKGVLFFCHGYGDTCTFFF-EGIARYI-------AASGYGVYALDHPGFGLSEGLHGY- 193 (258)
Q Consensus 126 ~~g~~i~~~~~~p~~~---~~~~p~Vv~lHG~g~~~~~~~-~~~~~~l-------~~~G~~V~~~D~rG~G~S~~~~~~- 193 (258)
.+|.+++|..++..+. ....|+|||+||++++...|+ ..+.+.+ ...+|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 4677888887753210 000357999999998765544 2454443 146799999999999999765321
Q ss_pred -----CCCHHHHHHHHHHHH-HHHHcCCCCCCCCEE-EEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 194 -----VPSFDALVDNVIEIY-TKIKGRPELQGLPCF-ILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 194 -----~~~~~~~~~dl~~~l-~~l~~~~~~~~~~i~-l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
.++++++++|+.+++ +.+.. ++++ ++||||||++|+.++.++|++++++|++++.
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi------~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGV------KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCC------CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 256778888777754 54442 2564 8999999999999999999999999999764
No 28
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.71 E-value=2.2e-16 Score=137.06 Aligned_cols=122 Identities=20% Similarity=0.258 Sum_probs=94.9
Q ss_pred eeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCH
Q 025045 118 TQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSF 197 (258)
Q Consensus 118 ~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~ 197 (258)
.+..+ .+.+|.+++|..++ . .++|||+||++.+... |..+...|. ++|+|+++|+||||.|+.+.....+.
T Consensus 14 ~~~~~-~~~~~~~i~y~~~G-----~-~~~iv~lHG~~~~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 14 FESRW-FDSSRGRIHYIDEG-----T-GPPILLCHGNPTWSFL-YRDIIVALR-DRFRCVAPDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred ccceE-EEcCCcEEEEEECC-----C-CCEEEEECCCCccHHH-HHHHHHHHh-CCcEEEEECCCCCCCCCCCCccccCH
Confidence 33444 34467788887653 1 3579999999866544 566777775 46999999999999998764434567
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 198 DALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 198 ~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
+++.+++.++++.+.. ++++++||||||.+++.++..+|++++++|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 85 DEHARVIGEFVDHLGL------DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred HHHHHHHHHHHHHhCC------CCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 8888888888877642 37999999999999999999999999999998764
No 29
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.71 E-value=1.8e-16 Score=136.40 Aligned_cols=121 Identities=23% Similarity=0.288 Sum_probs=87.6
Q ss_pred EEeCCCC---cEEEEEEeecCCCCCcceEEEEEcCCCCCccchHH--HHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCC
Q 025045 122 YERNSKG---LEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFE--GIARYIAASGYGVYALDHPGFGLSEGLHGYVPS 196 (258)
Q Consensus 122 ~~~~~~g---~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~--~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~ 196 (258)
+..+.+| ..++|... ++ .++||++||++.+...|.. .....+.+.||+|+++|+||||.|+........
T Consensus 10 ~~~~~~~~~~~~~~y~~~----g~--~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 83 (282)
T TIGR03343 10 VKINEKGLSNFRIHYNEA----GN--GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR 83 (282)
T ss_pred EEcccccccceeEEEEec----CC--CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc
Confidence 3344443 44666543 22 3579999999877554321 223456677999999999999999865321111
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
....++|+.++++.+.. ++++++||||||.+++.++.++|++++++|+++|.
T Consensus 84 ~~~~~~~l~~~l~~l~~------~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 84 GLVNARAVKGLMDALDI------EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred cchhHHHHHHHHHHcCC------CCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 12457788888887653 38999999999999999999999999999999874
No 30
>PRK10985 putative hydrolase; Provisional
Probab=99.71 E-value=3.7e-16 Score=138.06 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=95.6
Q ss_pred EEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHH
Q 025045 121 WYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCT-FFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDA 199 (258)
Q Consensus 121 ~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~ 199 (258)
..+...||..+.+.........+.+|+||++||++++.. .+...+++.|.++||+|+++|+||||.+......... ..
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~-~~ 112 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYH-SG 112 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceEC-CC
Confidence 345677887766543211112223789999999976643 3456788999999999999999999977543211111 23
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCc--ccEEEEECcCCCC
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRA--WDGVILVAPMCKK 257 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~--v~~vvl~~p~~~l 257 (258)
..+|+..+++++..+. +..+++++||||||.+++.++.++++. ++++|++++..++
T Consensus 113 ~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 113 ETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred chHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 4688888888887642 345899999999999988888876543 8899999887653
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.70 E-value=1.6e-16 Score=133.72 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=84.0
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
.|+|||+||++++... |..+.+.+ ++|+|+++|+||||.|..+.. .+++.+++|+.++++.+.. +++++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~------~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGEAL--PDYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNI------LPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHHHc--CCCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCC------CCeEE
Confidence 4679999999988765 66777777 369999999999999986543 3788999999999987643 38999
Q ss_pred EEcchHHHHHHHHHHhCCCc-ccEEEEECcCC
Q 025045 225 LGQSMGGAVTIKAHLKEPRA-WDGVILVAPMC 255 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~~-v~~vvl~~p~~ 255 (258)
+||||||.+++.++.++|+. +++++++++..
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999999999998654 99999988654
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.69 E-value=2.2e-16 Score=131.55 Aligned_cols=102 Identities=20% Similarity=0.342 Sum_probs=85.5
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
+|+||++||++.+... |..+.+.+. .||+|+++|+||||.|+... ...+++++++|+.++++.+.. +++++
T Consensus 13 ~~~li~~hg~~~~~~~-~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~------~~v~l 83 (251)
T TIGR02427 13 APVLVFINSLGTDLRM-WDPVLPALT-PDFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLGI------ERAVF 83 (251)
T ss_pred CCeEEEEcCcccchhh-HHHHHHHhh-cccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC------CceEE
Confidence 6789999999888665 566777774 68999999999999996543 335788999999999887643 37999
Q ss_pred EEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 225 LGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+||||||.+++.++.++|++++++|++++..
T Consensus 84 iG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 84 CGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred EEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 9999999999999999999999999988654
No 33
>PLN02578 hydrolase
Probab=99.69 E-value=5.4e-16 Score=138.63 Aligned_cols=115 Identities=23% Similarity=0.312 Sum_probs=92.9
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNV 204 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl 204 (258)
+.+|..++|...+ + .++||++||++++... |..+...|++ +|+|+++|++|||.|+.+.. .++.+.+.+|+
T Consensus 72 ~~~~~~i~Y~~~g--~----g~~vvliHG~~~~~~~-w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~l 142 (354)
T PLN02578 72 TWRGHKIHYVVQG--E----GLPIVLIHGFGASAFH-WRYNIPELAK-KYKVYALDLLGFGWSDKALI-EYDAMVWRDQV 142 (354)
T ss_pred EECCEEEEEEEcC--C----CCeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCccc-ccCHHHHHHHH
Confidence 3357778887542 1 3469999999987654 5666777754 69999999999999987643 35778888999
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 205 IEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 205 ~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
.++++.+.. ++++++|||+||.+++.+|.++|++++++|++++.
T Consensus 143 ~~~i~~~~~------~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 143 ADFVKEVVK------EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHHHhcc------CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 999988764 37999999999999999999999999999998764
No 34
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.68 E-value=4.7e-16 Score=136.23 Aligned_cols=123 Identities=18% Similarity=0.202 Sum_probs=93.5
Q ss_pred EEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHH
Q 025045 121 WYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDA 199 (258)
Q Consensus 121 ~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~ 199 (258)
.++...+|.+++|..+.+.+ .++||++||++++... . .+...+...+|+|+++|+||||.|+.... ...+.++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~----~~~lvllHG~~~~~~~-~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPD----GKPVVFLHGGPGSGTD-P-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred CeEEcCCCcEEEEEECcCCC----CCEEEEECCCCCCCCC-H-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 34556678899998764322 3469999998766443 2 33444545689999999999999986532 2345677
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
.++|+..+++++.. ++++++||||||.+++.++.++|++++++|+++++.
T Consensus 81 ~~~dl~~l~~~l~~------~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 81 LVADIEKLREKLGI------KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHcCC------CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 88888888877643 379999999999999999999999999999998754
No 35
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.68 E-value=7e-16 Score=132.63 Aligned_cols=120 Identities=21% Similarity=0.361 Sum_probs=100.5
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHHHHH
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDALVD 202 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~~~~ 202 (258)
.+.+|..+++..- +....|+|+++||+....-. |......|++.||+|+++|+||+|.|+.+.. ..+++..+++
T Consensus 27 ~~~~gI~~h~~e~----g~~~gP~illlHGfPe~wys-wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~ 101 (322)
T KOG4178|consen 27 VTYKGIRLHYVEG----GPGDGPIVLLLHGFPESWYS-WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVG 101 (322)
T ss_pred EEEccEEEEEEee----cCCCCCEEEEEccCCccchh-hhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHH
Confidence 4445556665543 22226799999999987554 6777889999999999999999999998876 6679999999
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 203 NVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 203 dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
|+..+++.+... +++++||+||+.+|..++..+|++++++|++...
T Consensus 102 di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~ 147 (322)
T KOG4178|consen 102 DIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVP 147 (322)
T ss_pred HHHHHHHHhccc------eeEEEeccchhHHHHHHHHhChhhcceEEEecCC
Confidence 999999999844 8999999999999999999999999999987543
No 36
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.68 E-value=5.3e-16 Score=133.98 Aligned_cols=127 Identities=28% Similarity=0.411 Sum_probs=89.0
Q ss_pred eeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCC--
Q 025045 118 TQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVP-- 195 (258)
Q Consensus 118 ~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~-- 195 (258)
....++...++..+......+++.+ +.++|++||+|.....|+..+ +.|++ .++|+++|++|+|+|+.+.-...
T Consensus 65 ~~~~~v~i~~~~~iw~~~~~~~~~~--~~plVliHGyGAg~g~f~~Nf-~~La~-~~~vyaiDllG~G~SSRP~F~~d~~ 140 (365)
T KOG4409|consen 65 YSKKYVRIPNGIEIWTITVSNESAN--KTPLVLIHGYGAGLGLFFRNF-DDLAK-IRNVYAIDLLGFGRSSRPKFSIDPT 140 (365)
T ss_pred cceeeeecCCCceeEEEeecccccC--CCcEEEEeccchhHHHHHHhh-hhhhh-cCceEEecccCCCCCCCCCCCCCcc
Confidence 3344444456666666665555432 567999999998877766655 44444 68999999999999987643321
Q ss_pred -CHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 196 -SFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 196 -~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
....+++-+++.-... .-.+.+|+|||+||.+|..||++||++|+.+||++|+
T Consensus 141 ~~e~~fvesiE~WR~~~------~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 141 TAEKEFVESIEQWRKKM------GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred cchHHHHHHHHHHHHHc------CCcceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 1223333333322222 2337999999999999999999999999999999996
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.68 E-value=4.7e-16 Score=129.15 Aligned_cols=103 Identities=23% Similarity=0.415 Sum_probs=82.9
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHHHHHH-HHHHHHHHHcCCCCCCCCEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDALVDN-VIEIYTKIKGRPELQGLPCF 223 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~~~~d-l~~~l~~l~~~~~~~~~~i~ 223 (258)
|+||++||++++... |..+.+.|+ .||.|+.+|+||+|.|+.+.. ...++++.++| +..+++.+ +.++++
T Consensus 2 ~~vv~~hG~~~~~~~-~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 73 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD-WQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL------GIEPFF 73 (251)
T ss_pred CEEEEEcCCCCchhh-HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc------CCCeEE
Confidence 579999999988765 677888887 799999999999999976533 23456666666 55555443 244799
Q ss_pred EEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 224 ILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 224 l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
++|||+||.+++.++.++|+.+++++++++...
T Consensus 74 l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 74 LVGYSMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred EEEeccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 999999999999999999999999999987643
No 38
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.67 E-value=4.2e-16 Score=139.11 Aligned_cols=125 Identities=13% Similarity=0.226 Sum_probs=94.5
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccc----------hHHHHH---HHHHHCCcEEEEECCCC--CCCCCC
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTF----------FFEGIA---RYIAASGYGVYALDHPG--FGLSEG 189 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~----------~~~~~~---~~l~~~G~~V~~~D~rG--~G~S~~ 189 (258)
..+|.+|+|..|++.+... .++||++||++++... +|..+. +.+...+|.|+++|+|| ||.|..
T Consensus 12 ~~~~~~~~y~~~g~~~~~~-~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAER-SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred ccCCceEEEEeccccCCCC-CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 3467889999997633222 4689999999886522 355443 34546789999999999 565542
Q ss_pred C----C-------CCCCCHHHHHHHHHHHHHHHHcCCCCCCCC-EEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 190 L----H-------GYVPSFDALVDNVIEIYTKIKGRPELQGLP-CFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 190 ~----~-------~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~-i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
. . ...++++++++|+.++++.+.. ++ ++++||||||++++.++.++|++++++|++++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI------EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSAR 163 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC------CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCc
Confidence 1 1 1135788999999999988753 26 99999999999999999999999999999987643
No 39
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=1.2e-15 Score=127.00 Aligned_cols=131 Identities=21% Similarity=0.340 Sum_probs=108.0
Q ss_pred eeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHH-CCcEEEEECCCCCCCCCCCCCCCC
Q 025045 117 RTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAA-SGYGVYALDHPGFGLSEGLHGYVP 195 (258)
Q Consensus 117 ~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~~~~~ 195 (258)
.++.+...+..|..+.+..+.|.... .++++|+||...+...... +...+.. .+++|+.+||+|.|.|.|...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~--~~~lly~hGNa~Dlgq~~~-~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--- 107 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAA--HPTLLYSHGNAADLGQMVE-LFKELSIFLNCNVVSYDYSGYGRSSGKPS--- 107 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcccc--ceEEEEcCCcccchHHHHH-HHHHHhhcccceEEEEecccccccCCCcc---
Confidence 46778888999999999999887553 5799999999666554233 3344433 479999999999999999853
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 196 SFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 196 ~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.....+|+.++.+++.++.+ ..++|+|+|+|+|+..++.+|.+.| ++++||.+|+.+.
T Consensus 108 -E~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 108 -ERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG 165 (258)
T ss_pred -cccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh
Confidence 34677899999999999876 6789999999999999999999998 9999999999874
No 40
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.66 E-value=6.2e-16 Score=145.84 Aligned_cols=129 Identities=19% Similarity=0.187 Sum_probs=105.6
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCcc---chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCT---FFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALV 201 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~---~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~ 201 (258)
..||.+|++.+|.|....+ .|+||++||++.+.. .+.......++++||.|+++|+||+|.|++..... . ...+
T Consensus 3 ~~DG~~L~~~~~~P~~~~~-~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~ 79 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGGGP-VPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEA 79 (550)
T ss_pred CCCCCEEEEEEEecCCCCC-CCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccc
Confidence 4688899999999976545 899999999987642 12223456788999999999999999998864332 2 4678
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
+|+.++++++..+.. ...+|+++|+|+||.+++.++..+|+.++++|..+++.++
T Consensus 80 ~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 80 ADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred hHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 999999999988744 3469999999999999999999999899999999988764
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.65 E-value=1.3e-15 Score=123.79 Aligned_cols=105 Identities=22% Similarity=0.297 Sum_probs=90.8
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
.+|+++||+.|+... .+.+++.|.++||.|.++.|||||..... -...+.++|.+|+.+.+++|... .-..|.++
T Consensus 16 ~AVLllHGFTGt~~D-vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-fl~t~~~DW~~~v~d~Y~~L~~~---gy~eI~v~ 90 (243)
T COG1647 16 RAVLLLHGFTGTPRD-VRMLGRYLNENGYTVYAPRYPGHGTLPED-FLKTTPRDWWEDVEDGYRDLKEA---GYDEIAVV 90 (243)
T ss_pred EEEEEEeccCCCcHH-HHHHHHHHHHCCceEecCCCCCCCCCHHH-HhcCCHHHHHHHHHHHHHHHHHc---CCCeEEEE
Confidence 479999999998876 78899999999999999999999976532 12257889999999999999854 23479999
Q ss_pred EcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 226 GQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
|.||||.+|+.+|..+| ++++|.+|+..+.
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~a~~~~ 120 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMCAPVNV 120 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeecCCccc
Confidence 99999999999999998 8999999988764
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=1e-15 Score=136.29 Aligned_cols=116 Identities=16% Similarity=0.193 Sum_probs=86.7
Q ss_pred CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccc-----------hHHHHHH---HHHHCCcEEEEECCCCCCCCCCCCC
Q 025045 127 KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTF-----------FFEGIAR---YIAASGYGVYALDHPGFGLSEGLHG 192 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~-----------~~~~~~~---~l~~~G~~V~~~D~rG~G~S~~~~~ 192 (258)
+|..++|..+++. + .| +|++||++++... +|..+.. .|...+|+|+++|+||||.|...
T Consensus 44 ~~~~l~y~~~G~~-~---~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-- 116 (343)
T PRK08775 44 EDLRLRYELIGPA-G---AP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-- 116 (343)
T ss_pred CCceEEEEEeccC-C---CC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--
Confidence 6778888877531 2 23 6666665544332 4655554 45345799999999999988432
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 193 YVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 193 ~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
..+.+++++|+.++++.+... +.++|+||||||++++.++.++|++|+++|++++..
T Consensus 117 -~~~~~~~a~dl~~ll~~l~l~-----~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 117 -PIDTADQADAIALLLDALGIA-----RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred -CCCHHHHHHHHHHHHHHcCCC-----cceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 246788899999999987642 135799999999999999999999999999998754
No 43
>PRK10566 esterase; Provisional
Probab=99.64 E-value=5e-15 Score=125.46 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=84.4
Q ss_pred EEEeecCCC-CCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCC-------HHHHHHHH
Q 025045 133 CKSWMPKLG-DQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPS-------FDALVDNV 204 (258)
Q Consensus 133 ~~~~~p~~~-~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~-------~~~~~~dl 204 (258)
+..+.|... +++.|+||++||++++... +..+++.|++.||.|+++|+||+|.+...... .. .....+|+
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEF 91 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHH
Confidence 344455432 2337899999999887654 66789999999999999999999976322111 11 12345778
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEE
Q 025045 205 IEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVI 249 (258)
Q Consensus 205 ~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vv 249 (258)
.++++++..+..++.++|+++||||||.+++.++.++|+ +++.+
T Consensus 92 ~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~-~~~~~ 135 (249)
T PRK10566 92 PTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW-VKCVA 135 (249)
T ss_pred HHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC-eeEEE
Confidence 888888887655788899999999999999999988886 44443
No 44
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.64 E-value=1.6e-14 Score=124.78 Aligned_cols=127 Identities=16% Similarity=0.195 Sum_probs=95.8
Q ss_pred EeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCc-c--chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHH
Q 025045 123 ERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTC-T--FFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDA 199 (258)
Q Consensus 123 ~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~-~--~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~ 199 (258)
....+|..+....+.|...+ .+.||++||+.+.. . ..+..+++.|+++||.|+++|++|||.|.+.. .+++.
T Consensus 6 ~~~~~~~~l~g~~~~p~~~~--~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~ 80 (274)
T TIGR03100 6 TFSCEGETLVGVLHIPGASH--TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEG 80 (274)
T ss_pred EEEcCCcEEEEEEEcCCCCC--CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHH
Confidence 34566778888888876543 34677777654321 1 12456789999999999999999999997642 46778
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+.+|+.++++++..... ..++++++||||||.+++.++.. +++++++|+++|+..
T Consensus 81 ~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 81 IDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 88999999999975421 23479999999999999999865 457999999999753
No 45
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.63 E-value=3.1e-15 Score=127.23 Aligned_cols=95 Identities=25% Similarity=0.426 Sum_probs=76.3
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
|+|||+||++++... |..+...|.+ .|+|+++|+||||.|+... ..+.++.++++.+ + ..++++++
T Consensus 14 ~~ivllHG~~~~~~~-w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~------~~~~~~lv 79 (256)
T PRK10349 14 VHLVLLHGWGLNAEV-WRCIDEELSS-HFTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q------APDKAIWL 79 (256)
T ss_pred CeEEEECCCCCChhH-HHHHHHHHhc-CCEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c------CCCCeEEE
Confidence 469999999988775 6678888865 5999999999999998643 2456555555432 1 13479999
Q ss_pred EcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 226 GQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
||||||.+++.+|.++|++++++|++++.
T Consensus 80 GhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 80 GWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred EECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 99999999999999999999999999774
No 46
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.63 E-value=3.5e-15 Score=124.03 Aligned_cols=122 Identities=16% Similarity=0.226 Sum_probs=90.4
Q ss_pred EEeecCCCCCcceEEEEEcCCCCCccchH--HHHHHHHHHCCcEEEEECCCCCCCCCCCCCC-C----CCHHHHHHHHHH
Q 025045 134 KSWMPKLGDQIKGVLFFCHGYGDTCTFFF--EGIARYIAASGYGVYALDHPGFGLSEGLHGY-V----PSFDALVDNVIE 206 (258)
Q Consensus 134 ~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~--~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~-~----~~~~~~~~dl~~ 206 (258)
.+|.|.+.+.+.|+||++||++++...+. ..+...+.+.||.|+++|++|++.+.....+ . ........|+..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 45677653333799999999987765432 1356666668999999999998754321110 0 011234567888
Q ss_pred HHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 207 IYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 207 ~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+++++..+..++.++++|+||||||.+++.++.++|+.+++++.+++..
T Consensus 82 ~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 82 LIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 8888888777888899999999999999999999999999998887653
No 47
>PRK07581 hypothetical protein; Validated
Probab=99.62 E-value=1.6e-15 Score=134.68 Aligned_cols=122 Identities=17% Similarity=0.143 Sum_probs=83.4
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHH---HHHHHCCcEEEEECCCCCCCCCCCCCC--CCCHH-
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIA---RYIAASGYGVYALDHPGFGLSEGLHGY--VPSFD- 198 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~---~~l~~~G~~V~~~D~rG~G~S~~~~~~--~~~~~- 198 (258)
+.+|.+++|..+++..... .|+||++||++++... +..+. +.+...+|+|+++|+||||.|..+... .++++
T Consensus 22 ~~~~~~l~y~~~G~~~~~~-~~~vll~~~~~~~~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 99 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAK-DNAILYPTWYSGTHQD-NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAAR 99 (339)
T ss_pred CcCCceEEEEecCccCCCC-CCEEEEeCCCCCCccc-chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCC
Confidence 3457788888886532122 4577777877765443 32221 355556899999999999999755321 12222
Q ss_pred ----HHHHHHHH----HHHHHHcCCCCCCCC-EEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 199 ----ALVDNVIE----IYTKIKGRPELQGLP-CFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 199 ----~~~~dl~~----~l~~l~~~~~~~~~~-i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
...+|+.+ +++.+.. ++ ++|+||||||++|+.+|.++|++|+++|++++.
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~lgi------~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 100 FPHVTIYDNVRAQHRLLTEKFGI------ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred CCceeHHHHHHHHHHHHHHHhCC------CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 24556655 4444443 37 479999999999999999999999999999754
No 48
>PLN02872 triacylglycerol lipase
Probab=99.61 E-value=2.2e-15 Score=136.12 Aligned_cols=140 Identities=19% Similarity=0.251 Sum_probs=104.7
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCC---CCCcceEEEEEcCCCCCccchH-----HHHHHHHHHCCcEEEEECCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKL---GDQIKGVLFFCHGYGDTCTFFF-----EGIARYIAASGYGVYALDHPGFG 185 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~---~~~~~p~Vv~lHG~g~~~~~~~-----~~~~~~l~~~G~~V~~~D~rG~G 185 (258)
.|+..|+..+.+.||..+....+.+.. +...+|+|+++||++.+...|. ..++..|+++||+|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 467788999999999999887764322 1122678999999987665542 34667888999999999999998
Q ss_pred CCCCCC--------CCCCCHHHHH-HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC---cccEEEEECc
Q 025045 186 LSEGLH--------GYVPSFDALV-DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR---AWDGVILVAP 253 (258)
Q Consensus 186 ~S~~~~--------~~~~~~~~~~-~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~---~v~~vvl~~p 253 (258)
.|.+.. .+..++++++ .|+.++++++... ..++++++||||||.+++.++ .+|+ +++.+++++|
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 764321 1123566666 7999999999753 245899999999999998555 5665 6888999998
Q ss_pred CCCC
Q 025045 254 MCKK 257 (258)
Q Consensus 254 ~~~l 257 (258)
...+
T Consensus 196 ~~~~ 199 (395)
T PLN02872 196 ISYL 199 (395)
T ss_pred hhhh
Confidence 7643
No 49
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.61 E-value=5.7e-15 Score=133.25 Aligned_cols=123 Identities=15% Similarity=0.236 Sum_probs=91.9
Q ss_pred CCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccc------------hHHHHH---HHHHHCCcEEEEECCCCC-CCCCC
Q 025045 126 SKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTF------------FFEGIA---RYIAASGYGVYALDHPGF-GLSEG 189 (258)
Q Consensus 126 ~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~------------~~~~~~---~~l~~~G~~V~~~D~rG~-G~S~~ 189 (258)
.+|.+++|..++..+... .|+||++||++++... +|..+. +.+...+|+|+++|++|+ |.|.+
T Consensus 30 ~~~~~~~y~~~G~~~~~~-~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 30 LPPVELAYETYGTLNADR-SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred cCCceEEEEeccccCCCC-CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 356788999887432222 5689999999988653 244443 123246899999999983 44433
Q ss_pred CCC-------------CCCCHHHHHHHHHHHHHHHHcCCCCCCCC-EEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 190 LHG-------------YVPSFDALVDNVIEIYTKIKGRPELQGLP-CFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 190 ~~~-------------~~~~~~~~~~dl~~~l~~l~~~~~~~~~~-i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+.. ..++++++++|+.++++.+... + ++++||||||++++.++.++|++++++|++++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT------RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC------CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 210 1357899999999999987643 5 5899999999999999999999999999998654
No 50
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.61 E-value=2.1e-14 Score=130.48 Aligned_cols=114 Identities=29% Similarity=0.386 Sum_probs=81.3
Q ss_pred EEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHH----HHHHHH
Q 025045 130 EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDA----LVDNVI 205 (258)
Q Consensus 130 ~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~----~~~dl~ 205 (258)
.+.+..+.+ + .. +|+||++||++++...|. .....|++ +|+|+++|+||||.|+.+.....+.+. +++++.
T Consensus 93 ~~~~~~~~~-~-~~-~p~vvllHG~~~~~~~~~-~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 93 FINTVTFDS-K-ED-APTLVMVHGYGASQGFFF-RNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFE 167 (402)
T ss_pred eEEEEEecC-C-CC-CCEEEEECCCCcchhHHH-HHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHH
Confidence 666655532 2 22 679999999988766544 44566755 599999999999999765322122222 234444
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
++++.+ +.++++++||||||.+++.++.++|++++++|+++|.
T Consensus 168 ~~~~~l------~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 168 EWRKAK------NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HHHHHc------CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 444332 2347999999999999999999999999999999875
No 51
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.61 E-value=4.9e-15 Score=103.67 Aligned_cols=79 Identities=35% Similarity=0.747 Sum_probs=71.3
Q ss_pred CcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025045 128 GLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEI 207 (258)
Q Consensus 128 g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~ 207 (258)
|.+|+++.|.|++. + +.+|+++||++.+... +..+++.|+++||.|+++|+||||+|++......+++++++|+..+
T Consensus 1 G~~L~~~~w~p~~~-~-k~~v~i~HG~~eh~~r-y~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~ 77 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-P-KAVVVIVHGFGEHSGR-YAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQF 77 (79)
T ss_pred CcEEEEEEecCCCC-C-CEEEEEeCCcHHHHHH-HHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHH
Confidence 56899999999876 4 8899999999988774 7889999999999999999999999999888888999999999988
Q ss_pred HH
Q 025045 208 YT 209 (258)
Q Consensus 208 l~ 209 (258)
++
T Consensus 78 ~~ 79 (79)
T PF12146_consen 78 IQ 79 (79)
T ss_pred hC
Confidence 74
No 52
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.59 E-value=2e-14 Score=128.50 Aligned_cols=116 Identities=27% Similarity=0.371 Sum_probs=90.3
Q ss_pred CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 025045 127 KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIE 206 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~ 206 (258)
++..++|..+.+ .. .++|||+||++++... |..+...|.+ +|+|+++|+||||.|..... ..+++++++++..
T Consensus 117 ~~~~i~~~~~g~---~~-~~~vl~~HG~~~~~~~-~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~ 189 (371)
T PRK14875 117 GGRTVRYLRLGE---GD-GTPVVLIHGFGGDLNN-WLFNHAALAA-GRPVIALDLPGHGASSKAVG-AGSLDELAAAVLA 189 (371)
T ss_pred cCcEEEEecccC---CC-CCeEEEECCCCCccch-HHHHHHHHhc-CCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHH
Confidence 455676655433 12 4679999999988776 5556677754 59999999999999965322 3578888888888
Q ss_pred HHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 207 IYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 207 ~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+++.+. ..+++++|||+||.+++.++.++|++++++|+++|..
T Consensus 190 ~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 190 FLDALG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred HHHhcC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 877653 3479999999999999999999999999999998763
No 53
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.58 E-value=8.4e-15 Score=118.59 Aligned_cols=137 Identities=18% Similarity=0.248 Sum_probs=115.6
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGY 193 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~ 193 (258)
.++..+.....+.|..+++.+....+ +. +|+++++||..++-........-.+...+.+|+.++|||+|.|+|.
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E--~S-~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs--- 123 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSE--SS-RPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGS--- 123 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeeccc--CC-CceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCC---
Confidence 46778888889999988887766533 23 7899999999888766554444456667999999999999999987
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 194 VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 194 ~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
++.+.+.-|..++++++..+...+..++++.|.|+||++|+.+|.+..+++.++|+..-+.+|
T Consensus 124 -psE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 124 -PSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI 186 (300)
T ss_pred -ccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc
Confidence 456677789999999999999999999999999999999999999999999999998877765
No 54
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.58 E-value=1e-14 Score=121.11 Aligned_cols=97 Identities=23% Similarity=0.368 Sum_probs=77.1
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
.|+||++||++++... |..+...|. .+|+|+++|+||+|.|+.... .+++++++++.+.+ .+++++
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~----------~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRCLDEELS-AHFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA----------PDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchhh-HHHHHHhhc-cCeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC----------CCCeEE
Confidence 3679999999988765 567778875 469999999999999876432 35666555544322 237999
Q ss_pred EEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 225 LGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+||||||.+++.++.++|++++++|++++..
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 9999999999999999999999999987753
No 55
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.56 E-value=2.7e-13 Score=117.17 Aligned_cols=132 Identities=23% Similarity=0.333 Sum_probs=90.4
Q ss_pred EEeCCCCcEEEEEEeecCC--CCCcceEEEEEcCCCCCccchHH--HHHHHHHHCCcEEEEECC--CCCCCCCCCC----
Q 025045 122 YERNSKGLEIFCKSWMPKL--GDQIKGVLFFCHGYGDTCTFFFE--GIARYIAASGYGVYALDH--PGFGLSEGLH---- 191 (258)
Q Consensus 122 ~~~~~~g~~i~~~~~~p~~--~~~~~p~Vv~lHG~g~~~~~~~~--~~~~~l~~~G~~V~~~D~--rG~G~S~~~~---- 191 (258)
+.....+.++.|.+|.|+. ..+ .|+|+++||++++...+.. .+...+.+.|+.|+++|. +|+|.+....
T Consensus 18 ~~s~~~~~~~~~~v~~P~~~~~~~-~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~ 96 (275)
T TIGR02821 18 HKSETCGVPMTFGVFLPPQAAAGP-VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDF 96 (275)
T ss_pred EeccccCCceEEEEEcCCCccCCC-CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccc
Confidence 3345567788899999974 333 7999999999987765422 233444557999999998 5555332100
Q ss_pred ----C-----------CCCCHH-HHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 192 ----G-----------YVPSFD-ALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 192 ----~-----------~~~~~~-~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
. ...... ..++++..+++. ...++.++++++||||||.+++.++.++|+.++++++++|+.
T Consensus 97 g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 97 GKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA---QFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred cCCccccccCCcCcccccchHHHHHHHHHHHHHHh---hCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 0 001112 223455444443 233567789999999999999999999999999999999986
Q ss_pred CC
Q 025045 256 KK 257 (258)
Q Consensus 256 ~l 257 (258)
+.
T Consensus 174 ~~ 175 (275)
T TIGR02821 174 AP 175 (275)
T ss_pred Cc
Confidence 53
No 56
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.56 E-value=5.6e-14 Score=117.81 Aligned_cols=120 Identities=18% Similarity=0.308 Sum_probs=89.2
Q ss_pred CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHH-CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025045 127 KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAA-SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVI 205 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~ 205 (258)
+|..+.+..|......+..|+++++||.|.+.-. |..++..+.. ..++|+++|+||||++.-......+.+.+.+|+.
T Consensus 56 ~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LS-fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~ 134 (343)
T KOG2564|consen 56 DGSDLTFNVYLTLPSATEGPILLLLHGGGSSALS-FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFG 134 (343)
T ss_pred CCCcceEEEEEecCCCCCccEEEEeecCcccchh-HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHH
Confidence 3333344444433323337899999999887655 5667776655 4788999999999999776655568899999999
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh--CCCcccEEEEE
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK--EPRAWDGVILV 251 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~--~p~~v~~vvl~ 251 (258)
++++++-.. ...+|+|+||||||.+|.+.+.. -|+ +.|++.+
T Consensus 135 ~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~vi 178 (343)
T KOG2564|consen 135 AVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVI 178 (343)
T ss_pred HHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceEEE
Confidence 999998754 35579999999999999888764 365 6777665
No 57
>PLN00021 chlorophyllase
Probab=99.55 E-value=1.9e-13 Score=120.03 Aligned_cols=118 Identities=18% Similarity=0.195 Sum_probs=87.7
Q ss_pred cEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 025045 129 LEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIY 208 (258)
Q Consensus 129 ~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l 208 (258)
..+.+.+|.|..... .|+|||+||++.+... +..+.+.+++.||.|+++|++|++.+.. . ...+|..+++
T Consensus 37 ~~~p~~v~~P~~~g~-~PvVv~lHG~~~~~~~-y~~l~~~Las~G~~VvapD~~g~~~~~~----~----~~i~d~~~~~ 106 (313)
T PLN00021 37 PPKPLLVATPSEAGT-YPVLLFLHGYLLYNSF-YSQLLQHIASHGFIVVAPQLYTLAGPDG----T----DEIKDAAAVI 106 (313)
T ss_pred CCceEEEEeCCCCCC-CCEEEEECCCCCCccc-HHHHHHHHHhCCCEEEEecCCCcCCCCc----h----hhHHHHHHHH
Confidence 467788888876555 7999999999887554 7778899999999999999998643211 1 1223444444
Q ss_pred HHHHcC--------CCCCCCCEEEEEcchHHHHHHHHHHhCCC-----cccEEEEECcCCC
Q 025045 209 TKIKGR--------PELQGLPCFILGQSMGGAVTIKAHLKEPR-----AWDGVILVAPMCK 256 (258)
Q Consensus 209 ~~l~~~--------~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~-----~v~~vvl~~p~~~ 256 (258)
+++... ...+.++++++||||||.+++.++.++++ +++++|++.|+..
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 444421 22456789999999999999999998874 5899999998653
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.54 E-value=7.2e-14 Score=124.75 Aligned_cols=121 Identities=12% Similarity=0.119 Sum_probs=92.3
Q ss_pred EEEEEeecCCCCCcceEEEEEcCCCCCccch----HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHH-HHH
Q 025045 131 IFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF----FEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVD-NVI 205 (258)
Q Consensus 131 i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~----~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~-dl~ 205 (258)
+....|.|..+...+++||++||+..+...+ ...+++.|+++||+|+++|++|+|.++.. .+++++.. |+.
T Consensus 48 ~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~ 123 (350)
T TIGR01836 48 VVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYID 123 (350)
T ss_pred EEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHH
Confidence 4444566654322245699999975433221 24689999999999999999999987543 35667664 588
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
++++++.+.. +.++++++||||||.+++.++..+|++++++|+++|.++.
T Consensus 124 ~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 124 KCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 8888887653 3568999999999999999999999999999999998764
No 59
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.53 E-value=4.6e-13 Score=117.81 Aligned_cols=141 Identities=21% Similarity=0.293 Sum_probs=104.5
Q ss_pred CCCCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCC-CCCC
Q 025045 112 APSGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGL-SEGL 190 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~-S~~~ 190 (258)
..+++.+.+..+...+|..|+.+++.|.....+.|+||.+||+++....+.. . ..++..||.|+.+|.||.|. +...
T Consensus 50 ~~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~-~-~~~a~~G~~vl~~d~rGqg~~~~d~ 127 (320)
T PF05448_consen 50 PTPGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFD-L-LPWAAAGYAVLAMDVRGQGGRSPDY 127 (320)
T ss_dssp SBSSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHH-H-HHHHHTT-EEEEE--TTTSSSS-B-
T ss_pred CCCCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccc-c-cccccCCeEEEEecCCCCCCCCCCc
Confidence 3467888888888999999999999998444448999999999988655333 2 24678999999999999982 2111
Q ss_pred --------CCC----------CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEEC
Q 025045 191 --------HGY----------VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVA 252 (258)
Q Consensus 191 --------~~~----------~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~ 252 (258)
.++ ..-+.....|+..+++.+...+++|.++|.+.|.|+||.+++.+|...+ +|+++++..
T Consensus 128 ~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 128 RGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred cccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 000 0124456789999999999999999999999999999999999999887 699999999
Q ss_pred cCC
Q 025045 253 PMC 255 (258)
Q Consensus 253 p~~ 255 (258)
|+.
T Consensus 207 P~l 209 (320)
T PF05448_consen 207 PFL 209 (320)
T ss_dssp ESS
T ss_pred CCc
Confidence 865
No 60
>PRK05855 short chain dehydrogenase; Validated
Probab=99.53 E-value=1e-13 Score=130.85 Aligned_cols=107 Identities=21% Similarity=0.348 Sum_probs=85.8
Q ss_pred EeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHHHH
Q 025045 123 ERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDALV 201 (258)
Q Consensus 123 ~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~~~ 201 (258)
+...+|..++|..+.+.. .|+|||+||++++... |..+...| ..||+|+++|+||||.|+.... ...++++++
T Consensus 7 ~~~~~g~~l~~~~~g~~~----~~~ivllHG~~~~~~~-w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 7 VVSSDGVRLAVYEWGDPD----RPTVVLVHGYPDNHEV-WDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred EEeeCCEEEEEEEcCCCC----CCeEEEEcCCCchHHH-HHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 356788899998875322 5689999999988665 66777888 6789999999999999986432 235789999
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
+|+.++++.+.. ..+++|+||||||.+++.++.+
T Consensus 81 ~dl~~~i~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 81 DDFAAVIDAVSP-----DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHHHhCC-----CCcEEEEecChHHHHHHHHHhC
Confidence 999999998753 2359999999999999888766
No 61
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.53 E-value=1.4e-13 Score=125.03 Aligned_cols=109 Identities=12% Similarity=0.058 Sum_probs=84.8
Q ss_pred ceEEEEEcCCCCCc--cchHHHHHHHHHH--CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCC
Q 025045 145 KGVLFFCHGYGDTC--TFFFEGIARYIAA--SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGL 220 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~--~~~~~~~~~~l~~--~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~ 220 (258)
+|++|++|||+++. ..|...+.+.+.. ..|+|+++|++|+|.+...... .......+++.++++++....+++.+
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 67899999998654 2334445555432 3699999999999987644322 23456678889999988755455677
Q ss_pred CEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 221 PCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
+++|+||||||.+|..++.+.|++|.+++++.|+
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 9999999999999999999999999999999886
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.52 E-value=1.2e-13 Score=106.95 Aligned_cols=95 Identities=29% Similarity=0.526 Sum_probs=75.8
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILG 226 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G 226 (258)
+||++||++++... +..+++.+++.||.|+.+|++++|.+... .++.++++.+..... +.++++++|
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHHH-HHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 58999999988665 67899999999999999999999987322 244445554422111 567999999
Q ss_pred cchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 227 QSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 227 ~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
||+||.+++.++.++ .+++++|+++|+.
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPYP 95 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESESS
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCcc
Confidence 999999999999988 5899999999854
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.52 E-value=6.4e-14 Score=121.04 Aligned_cols=110 Identities=13% Similarity=0.137 Sum_probs=83.2
Q ss_pred ceEEEEEcCCCCCc-cchHHHHHHHHH-HCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTC-TFFFEGIARYIA-ASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~-~~~~~~~~~~l~-~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
+|++|++|||+++. ..|...+.+.+. ..+|+|+++|+++++.+. ............+++..+++.+....+.+.+++
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 67899999998876 444555665444 458999999999874321 111112344556788888998876545566789
Q ss_pred EEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 223 FILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+++||||||.+|..++.++|+++++++++.|..
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 999999999999999999999999999998864
No 64
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.51 E-value=3.7e-13 Score=119.51 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=106.2
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCCC-----CCcceEEEEEcCCCC-CccchHHHHHHHHHHCCcEEEEECCCCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKLG-----DQIKGVLFFCHGYGD-TCTFFFEGIARYIAASGYGVYALDHPGFGLS 187 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~~-----~~~~p~Vv~lHG~g~-~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S 187 (258)
..+.....++..+||..+.+..+.+... ....|+||++||..+ +.+.+...++..+.+.||+|+.++.||+|.+
T Consensus 89 p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 89 PPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGS 168 (409)
T ss_pred CCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCC
Confidence 3455778888999999999987755433 123699999999854 4456788899999999999999999999988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC--cccEEEEECcC
Q 025045 188 EGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR--AWDGVILVAPM 254 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~--~v~~vvl~~p~ 254 (258)
.-.....++. .+.+|+.++++++..+ .+..+++.+|.||||++.++|..+..+ .+.+.+.+|-.
T Consensus 169 ~LtTpr~f~a-g~t~Dl~~~v~~i~~~--~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 169 KLTTPRLFTA-GWTEDLREVVNHIKKR--YPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred ccCCCceeec-CCHHHHHHHHHHHHHh--CCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 7654443333 5678999999999986 467789999999999999999887543 24444444433
No 65
>PLN02442 S-formylglutathione hydrolase
Probab=99.51 E-value=9.5e-13 Score=114.24 Aligned_cols=144 Identities=24% Similarity=0.316 Sum_probs=99.5
Q ss_pred CCCCceeeEEEEeCCCCcEEEEEEeecCCC-CCcceEEEEEcCCCCCccchH--HHHHHHHHHCCcEEEEECCCCCCC--
Q 025045 112 APSGIRTQEWYERNSKGLEIFCKSWMPKLG-DQIKGVLFFCHGYGDTCTFFF--EGIARYIAASGYGVYALDHPGFGL-- 186 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~-~~~~p~Vv~lHG~g~~~~~~~--~~~~~~l~~~G~~V~~~D~rG~G~-- 186 (258)
...+.....++....-|.++.|.+|.|... ....|+|+++||++++...+. ..+.+.+...|+.|+.+|..++|.
T Consensus 13 ~~~~~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~ 92 (283)
T PLN02442 13 MFGGFNRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNV 92 (283)
T ss_pred ccCCEEEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCC
Confidence 334444555666677888999999999732 223799999999988765432 234566677899999999877651
Q ss_pred ---CC------CCCCC----------CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccE
Q 025045 187 ---SE------GLHGY----------VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDG 247 (258)
Q Consensus 187 ---S~------~~~~~----------~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~ 247 (258)
+. +...+ ....+...+++...++..... ++.++++|+||||||.+|+.++.++|+++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~ 170 (283)
T PLN02442 93 EGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDKYKS 170 (283)
T ss_pred CCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchhEEE
Confidence 11 00000 011122345555555554322 3567899999999999999999999999999
Q ss_pred EEEECcCCCC
Q 025045 248 VILVAPMCKK 257 (258)
Q Consensus 248 vvl~~p~~~l 257 (258)
+++++|++++
T Consensus 171 ~~~~~~~~~~ 180 (283)
T PLN02442 171 VSAFAPIANP 180 (283)
T ss_pred EEEECCccCc
Confidence 9999998763
No 66
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.51 E-value=4e-13 Score=139.83 Aligned_cols=102 Identities=21% Similarity=0.302 Sum_probs=84.8
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCC-------CCCCCHHHHHHHHHHHHHHHHcCCCC
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLH-------GYVPSFDALVDNVIEIYTKIKGRPEL 217 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~-------~~~~~~~~~~~dl~~~l~~l~~~~~~ 217 (258)
.++|||+||++++... |..+...|.+ +|+|+++|+||||.|.... ....+++.+++++.++++.+..
T Consensus 1371 ~~~vVllHG~~~s~~~-w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~---- 1444 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGED-WIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP---- 1444 (1655)
T ss_pred CCeEEEECCCCCCHHH-HHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC----
Confidence 5689999999998775 6667777754 5999999999999997532 1234688888888888887643
Q ss_pred CCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 218 QGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
++++|+||||||.+++.++.++|++++++|++++.
T Consensus 1445 --~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1445 --GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred --CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 37999999999999999999999999999999764
No 67
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.50 E-value=1.9e-13 Score=117.86 Aligned_cols=127 Identities=19% Similarity=0.183 Sum_probs=97.0
Q ss_pred CCcEEEEEEeec--CCCCCcceEEEEEcCCCCCccchHHHH---------HHHHHHCCcEEEEECCCCCCCCCCCCCCCC
Q 025045 127 KGLEIFCKSWMP--KLGDQIKGVLFFCHGYGDTCTFFFEGI---------ARYIAASGYGVYALDHPGFGLSEGLHGYVP 195 (258)
Q Consensus 127 ~g~~i~~~~~~p--~~~~~~~p~Vv~lHG~g~~~~~~~~~~---------~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~ 195 (258)
||..|...+|.| ..+.+ .|+||..|+++.......... ...++++||.|+..|.||.|.|+|.....
T Consensus 1 DGv~L~adv~~P~~~~~~~-~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGP-FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSS-EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEecCCCCCCc-ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 688999999999 55555 899999999986531111111 12388999999999999999999875432
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 196 SFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 196 ~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.....+|..++|+|+..+ .+...+|.++|.|++|..++..|...|..+++++..++..|+
T Consensus 79 -~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 556789999999999988 556679999999999999999999888889999999988775
No 68
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.49 E-value=2.9e-13 Score=120.95 Aligned_cols=127 Identities=17% Similarity=0.173 Sum_probs=94.3
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDN 203 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~d 203 (258)
...+|..|...+..|..+.+ .|+||++-|..+..++++..+.+.++..|+.++.+|+||.|.|...... .+.+. -
T Consensus 170 iP~eg~~I~g~LhlP~~~~p-~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~---l 244 (411)
T PF06500_consen 170 IPFEGKTIPGYLHLPSGEKP-YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSR---L 244 (411)
T ss_dssp EEETTCEEEEEEEESSSSS--EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCH---H
T ss_pred EeeCCcEEEEEEEcCCCCCC-CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHH---H
Confidence 34455889998899986655 8999999999888887777777888999999999999999998643322 12222 3
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 204 VIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 204 l~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
...+++++...+.+|..+|.++|.|+||++|.++|..++++++++|.++|.+
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 4577888988889999999999999999999999988888999999999875
No 69
>PRK10162 acetyl esterase; Provisional
Probab=99.47 E-value=1.2e-12 Score=115.46 Aligned_cols=129 Identities=18% Similarity=0.254 Sum_probs=93.0
Q ss_pred eeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCC---CCccchHHHHHHHHHH-CCcEEEEECCCCCCCCCCCCC
Q 025045 117 RTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYG---DTCTFFFEGIARYIAA-SGYGVYALDHPGFGLSEGLHG 192 (258)
Q Consensus 117 ~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g---~~~~~~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~~ 192 (258)
..++..+...+| .+.+++|.|... . .|+||++||.| ++... +..+++.+++ .|+.|+++|||...+.
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~~-~-~p~vv~~HGGg~~~g~~~~-~~~~~~~la~~~g~~Vv~vdYrlape~----- 126 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQPD-S-QATLFYLHGGGFILGNLDT-HDRIMRLLASYSGCTVIGIDYTLSPEA----- 126 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCCC-C-CCEEEEEeCCcccCCCchh-hhHHHHHHHHHcCCEEEEecCCCCCCC-----
Confidence 344444455555 689999998643 3 68999999976 33333 4556777766 5999999999965332
Q ss_pred CCCCHHHHHHHHHHHHHHHHcC---CCCCCCCEEEEEcchHHHHHHHHHHhC------CCcccEEEEECcCCCC
Q 025045 193 YVPSFDALVDNVIEIYTKIKGR---PELQGLPCFILGQSMGGAVTIKAHLKE------PRAWDGVILVAPMCKK 257 (258)
Q Consensus 193 ~~~~~~~~~~dl~~~l~~l~~~---~~~~~~~i~l~G~S~Gg~ia~~~a~~~------p~~v~~vvl~~p~~~l 257 (258)
.+....+|+.++++++.++ .+++.++|+|+|+|+||++++.++.+. +.+++++|+++|++++
T Consensus 127 ---~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 127 ---RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ---CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 1223457777777777542 356778999999999999999998653 3578999999998764
No 70
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.46 E-value=2.8e-13 Score=119.62 Aligned_cols=104 Identities=26% Similarity=0.456 Sum_probs=81.6
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHC-CcEEEEECCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAAS-GYGVYALDHPGFG-LSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~-G~~V~~~D~rG~G-~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
++.||++|||+++... |......+.+. |+.|+++|++|+| .|..+.+..++...+++-+..++..... +++
T Consensus 58 ~~pvlllHGF~~~~~~-w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~------~~~ 130 (326)
T KOG1454|consen 58 KPPVLLLHGFGASSFS-WRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV------EPV 130 (326)
T ss_pred CCcEEEeccccCCccc-HhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC------cce
Confidence 7789999999997665 66666666655 6999999999999 4545555556666766666666665543 369
Q ss_pred EEEEcchHHHHHHHHHHhCCCcccEEE---EECcCC
Q 025045 223 FILGQSMGGAVTIKAHLKEPRAWDGVI---LVAPMC 255 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~~p~~v~~vv---l~~p~~ 255 (258)
+++|||+||.+|+.+|..+|+.|+.++ +++|..
T Consensus 131 ~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~ 166 (326)
T KOG1454|consen 131 SLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPV 166 (326)
T ss_pred EEEEeCcHHHHHHHHHHhCcccccceeeeccccccc
Confidence 999999999999999999999999999 555543
No 71
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.44 E-value=1.9e-12 Score=111.48 Aligned_cols=132 Identities=15% Similarity=0.161 Sum_probs=94.1
Q ss_pred EEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCC-CccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHH
Q 025045 121 WYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGD-TCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDA 199 (258)
Q Consensus 121 ~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~-~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~ 199 (258)
..+..+||..+......++.... +|.||++||..| ..+.+...+.+.+.++||.|+++|+|||+.+.......+ -..
T Consensus 52 e~v~~pdg~~~~ldw~~~p~~~~-~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y-h~G 129 (345)
T COG0429 52 ERLETPDGGFIDLDWSEDPRAAK-KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY-HSG 129 (345)
T ss_pred EEEEcCCCCEEEEeeccCccccC-CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee-ccc
Confidence 34567777666665444433333 789999999854 445578889999999999999999999998865433322 234
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC--cccEEEEECcCCC
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR--AWDGVILVAPMCK 256 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~--~v~~vvl~~p~~~ 256 (258)
+.+|+..+++++... ..+.++..+|+|+||++-..+..+..+ .+.+.+.++..+|
T Consensus 130 ~t~D~~~~l~~l~~~--~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 130 ETEDIRFFLDWLKAR--FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred chhHHHHHHHHHHHh--CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 568999999999874 357799999999999666666554432 3566666655444
No 72
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.43 E-value=2.5e-12 Score=113.37 Aligned_cols=143 Identities=17% Similarity=0.172 Sum_probs=96.5
Q ss_pred CCCCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccch-----------------HHHHHHHHHHCCc
Q 025045 112 APSGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF-----------------FEGIARYIAASGY 174 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~-----------------~~~~~~~l~~~G~ 174 (258)
..+|+..|.+.+.+.++..+...+..|++-+.+.|+||++||-++..+.. ...++..|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 45789999999999999999999999988433389999999976543210 1246789999999
Q ss_pred EEEEECCCCCCCCCCCCCCC----CCHHH---------------HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHH
Q 025045 175 GVYALDHPGFGLSEGLHGYV----PSFDA---------------LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTI 235 (258)
Q Consensus 175 ~V~~~D~rG~G~S~~~~~~~----~~~~~---------------~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~ 235 (258)
.|+++|.+|+|+........ .+.+. .+-|...++|++..++++|+++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 99999999999865443211 11111 133556689999999999999999999999999999
Q ss_pred HHHHhCCCcccEEEEECcCC
Q 025045 236 KAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 236 ~~a~~~p~~v~~vvl~~p~~ 255 (258)
.++...+ +|++.|..+-++
T Consensus 242 ~LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 242 WLAALDD-RIKATVANGYLC 260 (390)
T ss_dssp HHHHH-T-T--EEEEES-B-
T ss_pred HHHHcch-hhHhHhhhhhhh
Confidence 9998776 799888776543
No 73
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.42 E-value=8e-13 Score=126.31 Aligned_cols=142 Identities=18% Similarity=0.125 Sum_probs=105.3
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCCCCCc--ceEEEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCCCCCC---C
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKLGDQI--KGVLFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHPGFGL---S 187 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~--~p~Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~rG~G~---S 187 (258)
.....+...+...||.++++.++.|.+.++. .|+||++||.+... ...+....+.++.+||.|+.+|+||-+- .
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 3445666777888999999999999775542 38999999986332 2225567788899999999999997532 1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 188 EGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
-........-....+|+.++++++.+...+|.+++.+.|+|+||.++++.+.+.+ .+++.+...+.++
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 1110000111234678999999888888889999999999999999999999888 6787777666443
No 74
>PRK11071 esterase YqiA; Provisional
Probab=99.38 E-value=4.1e-12 Score=103.92 Aligned_cols=90 Identities=14% Similarity=0.208 Sum_probs=68.6
Q ss_pred eEEEEEcCCCCCccchHH-HHHHHHHH--CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 146 GVLFFCHGYGDTCTFFFE-GIARYIAA--SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~-~~~~~l~~--~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
|+||++||++++...|.. .+...+.+ .+|+|+++|++|++ ++..+++.++++.+. .+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~------~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHG------GDPL 63 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcC------CCCe
Confidence 579999999988776432 35566655 37999999999884 245566666666543 3479
Q ss_pred EEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 223 FILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+++||||||.+++.++.++|. .+|+++|..+
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999999999983 3578888765
No 75
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=3.4e-12 Score=106.80 Aligned_cols=142 Identities=18% Similarity=0.211 Sum_probs=113.5
Q ss_pred CCCCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCC-
Q 025045 112 APSGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGL- 190 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~- 190 (258)
..+.+...+..+...+|..|..+...|...+...|.||-.||+++.... +..+. .++..||.|+.+|.||.|.|+..
T Consensus 50 ~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~-~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt 127 (321)
T COG3458 50 TLPRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGE-WHDML-HWAVAGYAVFVMDVRGQGSSSQDT 127 (321)
T ss_pred cCCceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCC-ccccc-cccccceeEEEEecccCCCccccC
Confidence 3467778888888999999999999998874448999999999988764 32332 23468999999999999887321
Q ss_pred ----CC---------------CCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEE
Q 025045 191 ----HG---------------YVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILV 251 (258)
Q Consensus 191 ----~~---------------~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~ 251 (258)
.+ ..+-+.....|+..+++.+..-.++|.++|.+.|.|.||.+++..+...| ++++++++
T Consensus 128 ~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 128 ADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred CCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 11 00113456779999999999988999999999999999999999998887 79999999
Q ss_pred CcCCC
Q 025045 252 APMCK 256 (258)
Q Consensus 252 ~p~~~ 256 (258)
.|+.+
T Consensus 207 ~Pfl~ 211 (321)
T COG3458 207 YPFLS 211 (321)
T ss_pred ccccc
Confidence 99764
No 76
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=1.9e-11 Score=103.25 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=102.2
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCC-CCCCCCC------CC---
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGF-GLSEGLH------GY--- 193 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~-G~S~~~~------~~--- 193 (258)
....+..+..+...|....+ .|.||++|++.+-.. ++..+++.+++.||.|+++|+-+. |.+.... ..
T Consensus 7 ~~~~~~~~~~~~a~P~~~~~-~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~ 84 (236)
T COG0412 7 IPAPDGELPAYLARPAGAGG-FPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLV 84 (236)
T ss_pred eeCCCceEeEEEecCCcCCC-CCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhh
Confidence 34444788888888887766 599999999987766 488899999999999999997663 3332211 00
Q ss_pred -CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 194 -VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 194 -~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
..+......|+.+.+++|..+.+.+.++|.++|+||||.+++.++.+.| .+++.+...|..
T Consensus 85 ~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~ 146 (236)
T COG0412 85 ERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL 146 (236)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC
Confidence 1123677899999999999887788889999999999999999999887 699999887753
No 77
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.37 E-value=9e-12 Score=109.46 Aligned_cols=125 Identities=18% Similarity=0.243 Sum_probs=93.4
Q ss_pred CCCCcEEEEEEeecC-CCCCcceEEEEEcCCC---CCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHH
Q 025045 125 NSKGLEIFCKSWMPK-LGDQIKGVLFFCHGYG---DTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDAL 200 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~-~~~~~~p~Vv~lHG~g---~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~ 200 (258)
..++..+.++.|.|. ......|+||++||.+ ++...+...+...+...|+.|+++|||-. +...+...
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla--------Pe~~~p~~ 129 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA--------PEHPFPAA 129 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC--------CCCCCCch
Confidence 344455778899882 2222378999999975 33344345566777778999999999833 22345567
Q ss_pred HHHHHHHHHHHHcC---CCCCCCCEEEEEcchHHHHHHHHHHhCCC----cccEEEEECcCCCC
Q 025045 201 VDNVIEIYTKIKGR---PELQGLPCFILGQSMGGAVTIKAHLKEPR----AWDGVILVAPMCKK 257 (258)
Q Consensus 201 ~~dl~~~l~~l~~~---~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~----~v~~vvl~~p~~~l 257 (258)
++|+.++++++..+ .+.|.++|++.|+|.||++++.++....+ ..++.++++|.++.
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 78888888888865 35788999999999999999999876443 47899999999876
No 78
>PRK11460 putative hydrolase; Provisional
Probab=99.36 E-value=1e-11 Score=104.69 Aligned_cols=109 Identities=18% Similarity=0.174 Sum_probs=78.0
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCC----------CCCC---CHHHHHHHHHHHHHHH
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLH----------GYVP---SFDALVDNVIEIYTKI 211 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~----------~~~~---~~~~~~~dl~~~l~~l 211 (258)
.++||++||+|++... +..+++.+.+.++.+..++.+|...+.... .... ......+++.+.++++
T Consensus 16 ~~~vIlLHG~G~~~~~-~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 16 QQLLLLFHGVGDNPVA-MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CcEEEEEeCCCCChHH-HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 7899999999999776 667888888776666666666643221100 0001 1233445566667777
Q ss_pred HcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 212 KGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 212 ~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
..+.+++.++|+++|||+||.+++.++.++|+.+.++++.++.
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 6666677889999999999999999999999888888887764
No 79
>PRK10115 protease 2; Provisional
Probab=99.34 E-value=7.8e-12 Score=120.57 Aligned_cols=142 Identities=15% Similarity=0.157 Sum_probs=107.1
Q ss_pred CceeeEEEEeCCCCcEEEE-EEeecCC--CCCcceEEEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEECCCCCCCCCC-
Q 025045 115 GIRTQEWYERNSKGLEIFC-KSWMPKL--GDQIKGVLFFCHGYGDTCT-FFFEGIARYIAASGYGVYALDHPGFGLSEG- 189 (258)
Q Consensus 115 ~~~~~~~~~~~~~g~~i~~-~~~~p~~--~~~~~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~- 189 (258)
....+...+...||.+|.+ .++.|.. ..+ .|+||++||..+... ..+......+.++||.|+.+++||-|.-..
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~-~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGH-NPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCC-CCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 4567777888999999998 5554532 233 699999999755432 224444567888999999999999754321
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 190 --LHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 190 --~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
..+....-....+|+.++++++..+.-.+++++.+.|.|.||.++.+++.++|++++++|+..|++|+
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 11000000134678999999998887779999999999999999999999999999999999999986
No 80
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.34 E-value=1.2e-11 Score=103.01 Aligned_cols=124 Identities=14% Similarity=0.153 Sum_probs=88.2
Q ss_pred EEEEEeecCCCCC-cceEEEEEcCCCCCccchHH--HHHHHHHHCCcEEEEECCCCCCC---CCCCC-CCCCCHHHHHHH
Q 025045 131 IFCKSWMPKLGDQ-IKGVLFFCHGYGDTCTFFFE--GIARYIAASGYGVYALDHPGFGL---SEGLH-GYVPSFDALVDN 203 (258)
Q Consensus 131 i~~~~~~p~~~~~-~~p~Vv~lHG~g~~~~~~~~--~~~~~l~~~G~~V~~~D~rG~G~---S~~~~-~~~~~~~~~~~d 203 (258)
|.|++|.|+.... +.|.||++||.+++.+.+.. .+.....+.||.|+.++...... ..... .....-......
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 4688999875322 36999999999988765432 34444445699999998542111 11100 000011123456
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 204 VIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 204 l~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
+..+++++..+..+|.++|++.|+|.||+++..++..+|+.+.++..+++.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 778889998888999999999999999999999999999999998887764
No 81
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.32 E-value=1.6e-11 Score=102.32 Aligned_cols=119 Identities=15% Similarity=0.128 Sum_probs=86.2
Q ss_pred EEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCC-CCCCCCCC---------CCHHHHH
Q 025045 132 FCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGL-SEGLHGYV---------PSFDALV 201 (258)
Q Consensus 132 ~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~-S~~~~~~~---------~~~~~~~ 201 (258)
..++..|..+.+ .|.||++|++.|-.. +...+++.|++.||.|+++|+.+... ........ ...+...
T Consensus 2 ~ay~~~P~~~~~-~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T PF01738_consen 2 DAYVARPEGGGP-RPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVA 79 (218)
T ss_dssp EEEEEEETTSSS-EEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHH
T ss_pred eEEEEeCCCCCC-CCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHH
Confidence 345667776644 899999999877653 46789999999999999999754433 11110000 0123556
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECc
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAP 253 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p 253 (258)
+|+.++++++..+...+.++|.++|+|+||.+++.++.+. ..++++|...|
T Consensus 80 ~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 7888999999998767788999999999999999999877 57999999888
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.31 E-value=3e-11 Score=112.61 Aligned_cols=122 Identities=12% Similarity=0.180 Sum_probs=87.8
Q ss_pred EEEEEEeecCCCCCcceEEEEEcCCCCCccch----HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHH-HHH
Q 025045 130 EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF----FEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALV-DNV 204 (258)
Q Consensus 130 ~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~----~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~-~dl 204 (258)
.+....|.|......+++||++||+......+ -..+.++|.++||+|+++|++|+|.+.... ++++++ +++
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~i 248 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDGV 248 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHHH
Confidence 46666677765432367899999987554322 136899999999999999999999875432 344444 357
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcchHHHHHH----HHHHhC-CCcccEEEEECcCCCC
Q 025045 205 IEIYTKIKGRPELQGLPCFILGQSMGGAVTI----KAHLKE-PRAWDGVILVAPMCKK 257 (258)
Q Consensus 205 ~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~----~~a~~~-p~~v~~vvl~~p~~~l 257 (258)
.++++.+... .+.++++++||||||.++. .++..+ +++++++++++..+|.
T Consensus 249 ~~al~~v~~~--~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 249 IAALEVVEAI--TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred HHHHHHHHHh--cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 7777777643 2456899999999999852 244554 7789999999887764
No 83
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.30 E-value=1.9e-11 Score=110.48 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=88.9
Q ss_pred CcEEEEEEeecCCCCCcceEEEEEcCCCCCc------------cchHHHHH---HHHHHCCcEEEEECCCCCCCCC----
Q 025045 128 GLEIFCKSWMPKLGDQIKGVLFFCHGYGDTC------------TFFFEGIA---RYIAASGYGVYALDHPGFGLSE---- 188 (258)
Q Consensus 128 g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~------------~~~~~~~~---~~l~~~G~~V~~~D~rG~G~S~---- 188 (258)
..+|.|..|+.-+... .++||++|++.++. ..||..+. +.+--..|.|+++|..|.+.|.
T Consensus 40 ~~~~~Y~t~G~ln~~~-~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 40 DVQMGYETYGTLNRAK-SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CceEEEEeccccCCCC-CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 4689999998655444 67999999997743 12344332 2232346899999999887531
Q ss_pred ---CC-------------CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE-EEEcchHHHHHHHHHHhCCCcccEEEEE
Q 025045 189 ---GL-------------HGYVPSFDALVDNVIEIYTKIKGRPELQGLPCF-ILGQSMGGAVTIKAHLKEPRAWDGVILV 251 (258)
Q Consensus 189 ---~~-------------~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~-l~G~S~Gg~ia~~~a~~~p~~v~~vvl~ 251 (258)
++ ..+..++.++++++..+++.+... ++. ++||||||++++.++.++|++++++|++
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~------~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA------RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 11 112257888899999998876543 565 9999999999999999999999999999
Q ss_pred CcCC
Q 025045 252 APMC 255 (258)
Q Consensus 252 ~p~~ 255 (258)
+...
T Consensus 193 a~~~ 196 (389)
T PRK06765 193 IGNP 196 (389)
T ss_pred ecCC
Confidence 7643
No 84
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.30 E-value=8.9e-12 Score=103.04 Aligned_cols=75 Identities=21% Similarity=0.333 Sum_probs=65.2
Q ss_pred cEEEEECCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEE
Q 025045 174 YGVYALDHPGFGLSEG---LHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVIL 250 (258)
Q Consensus 174 ~~V~~~D~rG~G~S~~---~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl 250 (258)
|+|+++|+||+|.|++ ......+.++.++++..+++.+... +++++||||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK------KINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS------SEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC------CeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7899999999999995 3344457788888888888877654 699999999999999999999999999999
Q ss_pred ECcC
Q 025045 251 VAPM 254 (258)
Q Consensus 251 ~~p~ 254 (258)
++++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9885
No 85
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=6.7e-11 Score=113.85 Aligned_cols=95 Identities=21% Similarity=0.260 Sum_probs=76.4
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCC----------CC---C---------CCCHHHHHH
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGL----------HG---Y---------VPSFDALVD 202 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~----------~~---~---------~~~~~~~~~ 202 (258)
.|+||++||++++... |..+++.|++.||.|+++|+||||+|... .. + ...+...+.
T Consensus 449 ~P~VVllHG~~g~~~~-~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 449 WPVVIYQHGITGAKEN-ALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CcEEEEeCCCCCCHHH-HHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 5699999999999876 66788999889999999999999999332 11 1 125788899
Q ss_pred HHHHHHHHHH------cC----CCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 203 NVIEIYTKIK------GR----PELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 203 dl~~~l~~l~------~~----~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
|+..+...+. .. ..++..+++++||||||.++..++..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 9999988887 21 12467799999999999999999875
No 86
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.29 E-value=2.9e-11 Score=104.29 Aligned_cols=102 Identities=25% Similarity=0.407 Sum_probs=84.2
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHC-CcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAAS-GYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCF 223 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~-G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~ 223 (258)
.|+++++||.-++... |..+.+.|++. |..|++.|.|.||.|...... +...+++|+..+++...... ...+++
T Consensus 52 ~Pp~i~lHGl~GS~~N-w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~Fi~~v~~~~--~~~~~~ 126 (315)
T KOG2382|consen 52 APPAIILHGLLGSKEN-WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLFIDGVGGST--RLDPVV 126 (315)
T ss_pred CCceEEecccccCCCC-HHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHHHHHccccc--ccCCce
Confidence 7899999999888876 77788888774 789999999999999865543 58899999999999987532 234799
Q ss_pred EEEcchHH-HHHHHHHHhCCCcccEEEEE
Q 025045 224 ILGQSMGG-AVTIKAHLKEPRAWDGVILV 251 (258)
Q Consensus 224 l~G~S~Gg-~ia~~~a~~~p~~v~~vvl~ 251 (258)
++|||||| .+++..+...|+.+..+|.+
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~ 155 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVE 155 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEE
Confidence 99999999 77777788889888776664
No 87
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.29 E-value=3.4e-11 Score=106.02 Aligned_cols=125 Identities=17% Similarity=0.177 Sum_probs=87.3
Q ss_pred CCCCcEEEEEEeecCCCCC--cceEEEEEcCCC---CC-ccchHHHHHHHH-HHCCcEEEEECCCCCCCCCCCCCCCCCH
Q 025045 125 NSKGLEIFCKSWMPKLGDQ--IKGVLFFCHGYG---DT-CTFFFEGIARYI-AASGYGVYALDHPGFGLSEGLHGYVPSF 197 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~--~~p~Vv~lHG~g---~~-~~~~~~~~~~~l-~~~G~~V~~~D~rG~G~S~~~~~~~~~~ 197 (258)
......+..++|.|....+ ..|.|||+||.| ++ ....+..+...+ .+.++.|+++|||=.-+ ..+
T Consensus 68 ~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE--------h~~ 139 (336)
T KOG1515|consen 68 IDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE--------HPF 139 (336)
T ss_pred ecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC--------CCC
Confidence 3344568999999876433 379999999975 22 222345555555 55799999999994322 223
Q ss_pred HHHHHHHHHHHHHHHcC----CCCCCCCEEEEEcchHHHHHHHHHHhC------CCcccEEEEECcCCCC
Q 025045 198 DALVDNVIEIYTKIKGR----PELQGLPCFILGQSMGGAVTIKAHLKE------PRAWDGVILVAPMCKK 257 (258)
Q Consensus 198 ~~~~~dl~~~l~~l~~~----~~~~~~~i~l~G~S~Gg~ia~~~a~~~------p~~v~~vvl~~p~~~l 257 (258)
....+|..+++.|+.++ ...|.++|+|.|.|.||++|..++.+. +-+++++|++.|++..
T Consensus 140 Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 140 PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 33344555555555432 456889999999999999999998653 3469999999999864
No 88
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.28 E-value=5.8e-12 Score=104.08 Aligned_cols=101 Identities=22% Similarity=0.315 Sum_probs=74.2
Q ss_pred EEEEcCCC---CCccchHHHHHHHHHH-CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC---CCCCCC
Q 025045 148 LFFCHGYG---DTCTFFFEGIARYIAA-SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGR---PELQGL 220 (258)
Q Consensus 148 Vv~lHG~g---~~~~~~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~---~~~~~~ 220 (258)
||++||.+ ++... ...++..+++ .|+.|+.+|||-. +...+...++|+.++++++..+ .+.+.+
T Consensus 1 v~~~HGGg~~~g~~~~-~~~~~~~la~~~g~~v~~~~Yrl~--------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES-HWPFAARLAAERGFVVVSIDYRLA--------PEAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTT-HHHHHHHHHHHHTSEEEEEE---T--------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHH-HHHHHHHHHhhccEEEEEeecccc--------ccccccccccccccceeeecccccccccccc
Confidence 79999975 33333 3445565554 8999999999833 2245668899999999999876 356788
Q ss_pred CEEEEEcchHHHHHHHHHHhCCC----cccEEEEECcCCCC
Q 025045 221 PCFILGQSMGGAVTIKAHLKEPR----AWDGVILVAPMCKK 257 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~p~----~v~~vvl~~p~~~l 257 (258)
+|+|+|+|.||.+++.++.+..+ .++++++++|..++
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999875322 48999999998765
No 89
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.25 E-value=1.3e-10 Score=95.86 Aligned_cols=100 Identities=26% Similarity=0.436 Sum_probs=75.4
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHC--CcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAAS--GYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCF 223 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~--G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~ 223 (258)
++++++||++++...|.. ....+... .|+|+++|+||||.|. .. .......++++..+++.+... +++
T Consensus 22 ~~i~~~hg~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~------~~~ 91 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRP-VFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGLE------KVV 91 (282)
T ss_pred CeEEEeCCCCCchhhhHH-HHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC------ceE
Confidence 379999999987665433 11222221 1899999999999997 11 123444478888888866543 499
Q ss_pred EEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 224 ILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 224 l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
++|||+||.+++.++.++|++++++|++++..
T Consensus 92 l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 92 LVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred EEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 99999999999999999999999999998753
No 90
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.24 E-value=1.5e-10 Score=97.94 Aligned_cols=114 Identities=20% Similarity=0.237 Sum_probs=85.7
Q ss_pred EEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 025045 133 CKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIK 212 (258)
Q Consensus 133 ~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~ 212 (258)
..++.|.+... .|+|||+||+.... .++..+.+++++.||.|+++|+...+.. .....++++.++++|+.
T Consensus 6 l~v~~P~~~g~-yPVv~f~~G~~~~~-s~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~ 75 (259)
T PF12740_consen 6 LLVYYPSSAGT-YPVVLFLHGFLLIN-SWYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLA 75 (259)
T ss_pred eEEEecCCCCC-cCEEEEeCCcCCCH-HHHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHH
Confidence 34566776555 89999999999544 4578899999999999999996653221 12234566667777765
Q ss_pred cCC--------CCCCCCEEEEEcchHHHHHHHHHHhC-----CCcccEEEEECcCCC
Q 025045 213 GRP--------ELQGLPCFILGQSMGGAVTIKAHLKE-----PRAWDGVILVAPMCK 256 (258)
Q Consensus 213 ~~~--------~~~~~~i~l~G~S~Gg~ia~~~a~~~-----p~~v~~vvl~~p~~~ 256 (258)
+.. ..|-+++.|.|||-||-+|..++..+ ..+++++|++.|+-.
T Consensus 76 ~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 76 KGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred hcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 421 23677899999999999999999887 457999999999863
No 91
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.22 E-value=2.7e-11 Score=100.44 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=74.4
Q ss_pred HHHHHHHHCCcEEEEECCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 164 GIARYIAASGYGVYALDHPGFGLSEGL---HGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 164 ~~~~~l~~~G~~V~~~D~rG~G~S~~~---~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
.....|+++||.|+.+|+||.+..... ......-...++|+.++++++.++..+|.++|+++|+|+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 456788899999999999998642110 11111234568999999999998888899999999999999999999999
Q ss_pred CCCcccEEEEECcCCCC
Q 025045 241 EPRAWDGVILVAPMCKK 257 (258)
Q Consensus 241 ~p~~v~~vvl~~p~~~l 257 (258)
+|++++++|..+|++++
T Consensus 85 ~~~~f~a~v~~~g~~d~ 101 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDL 101 (213)
T ss_dssp TCCGSSEEEEESE-SST
T ss_pred cceeeeeeeccceecch
Confidence 99999999999999886
No 92
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.20 E-value=6.7e-10 Score=94.13 Aligned_cols=102 Identities=20% Similarity=0.331 Sum_probs=89.3
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
..+||-+||.+|+-.+ +..+...|.+.|.+++.++|||+|.+++.....++-.+...-+.++++.+..+ .++++
T Consensus 35 ~gTVv~~hGsPGSH~D-FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-----~~~i~ 108 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHND-FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-----GKLIF 108 (297)
T ss_pred ceeEEEecCCCCCccc-hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-----CceEE
Confidence 6799999999887666 78889999999999999999999999998877777777788888888888754 47999
Q ss_pred EEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 225 LGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
+|||.|+-.|+.++..+| ..+++++.|.
T Consensus 109 ~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 109 LGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred EEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 999999999999999986 6799998874
No 93
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.18 E-value=2.3e-10 Score=91.39 Aligned_cols=108 Identities=18% Similarity=0.346 Sum_probs=83.9
Q ss_pred CcceEEEEEcCC---CCCccc-hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCC
Q 025045 143 QIKGVLFFCHGY---GDTCTF-FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQ 218 (258)
Q Consensus 143 ~~~p~Vv~lHG~---g~~~~~-~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~ 218 (258)
+.+|+.|++|-- +++... -...+++.|.+.||.++.+|+||-|+|.|..+.- -...+|+.++++|++.+. +
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G---iGE~~Da~aaldW~~~~h--p 100 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG---IGELEDAAAALDWLQARH--P 100 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC---cchHHHHHHHHHHHHhhC--C
Confidence 338899999973 343322 2567889999999999999999999999876542 245689999999999763 2
Q ss_pred CCC-EEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 219 GLP-CFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 219 ~~~-i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
..+ ..+.|+|+|+.+++.++.+.|+ ....+.+.|.++
T Consensus 101 ~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 101 DSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred CchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 333 4789999999999999999885 667777777665
No 94
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.16 E-value=3.4e-10 Score=113.81 Aligned_cols=119 Identities=13% Similarity=0.228 Sum_probs=84.7
Q ss_pred EEEEEeecCCC----CCcceEEEEEcCCCCCccchHHH-----HHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCCHHHH
Q 025045 131 IFCKSWMPKLG----DQIKGVLFFCHGYGDTCTFFFEG-----IARYIAASGYGVYALDHPGFGLSEGLHG-YVPSFDAL 200 (258)
Q Consensus 131 i~~~~~~p~~~----~~~~p~Vv~lHG~g~~~~~~~~~-----~~~~l~~~G~~V~~~D~rG~G~S~~~~~-~~~~~~~~ 200 (258)
+..+.|.|... ....++||++||++.+... |+. +.+.|.++||+|+++|+ |.++.... ...++.++
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~-~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~ 124 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADM-WDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADH 124 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccc-eecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHH
Confidence 55566666542 1225789999999877654 332 47889999999999995 55544322 12466677
Q ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC-CCcccEEEEECcCCC
Q 025045 201 VDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE-PRAWDGVILVAPMCK 256 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~-p~~v~~vvl~~p~~~ 256 (258)
+.++.++++.+... ..++++++||||||.+++.++..+ +++|+++|+++..+|
T Consensus 125 i~~l~~~l~~v~~~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 125 VVALSEAIDTVKDV---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHHHHHHHHHh---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 77777777766543 234799999999999999988755 558999998777654
No 95
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.15 E-value=6.9e-10 Score=90.19 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=84.5
Q ss_pred ceEEEEEcCCCCCccc-hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCC--
Q 025045 145 KGVLFFCHGYGDTCTF-FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLP-- 221 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~-~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~-- 221 (258)
..+||+|||+-++... .+..++..+++.|+.++.+|++|.|+|++...+ ..+...++|+..+++++... .+
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~eadDL~sV~q~~s~~-----nr~v 106 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTEADDLHSVIQYFSNS-----NRVV 106 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-CcccchHHHHHHHHHHhccC-----ceEE
Confidence 4589999999877643 466789999999999999999999999986543 45556679999999999853 23
Q ss_pred EEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 222 CFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 222 i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
-+++|||-||.+++.++.++.+ +..+|-+++=++
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd 140 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD 140 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccc
Confidence 2699999999999999999986 667776665444
No 96
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.13 E-value=2.7e-10 Score=96.62 Aligned_cols=129 Identities=19% Similarity=0.127 Sum_probs=87.2
Q ss_pred EEeCCCCcEEEEEEeecCCCC--Ccc-eEEEEEcCCCCCccchHHHH-------HHHHHHCCcEEEEECCCC-CCCCCCC
Q 025045 122 YERNSKGLEIFCKSWMPKLGD--QIK-GVLFFCHGYGDTCTFFFEGI-------ARYIAASGYGVYALDHPG-FGLSEGL 190 (258)
Q Consensus 122 ~~~~~~g~~i~~~~~~p~~~~--~~~-p~Vv~lHG~g~~~~~~~~~~-------~~~l~~~G~~V~~~D~rG-~G~S~~~ 190 (258)
+..+..|.++.|++|.|..-+ +.. |.|+|+||.|..+......+ +....+.+|-|+++.|-- +..++.
T Consensus 165 f~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~- 243 (387)
T COG4099 165 FYDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE- 243 (387)
T ss_pred eeccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-
Confidence 334577899999999996422 224 99999999986654422211 111123346677777531 111211
Q ss_pred CCCCCCHHHHHHHHHHHHH-HHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 191 HGYVPSFDALVDNVIEIYT-KIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 191 ~~~~~~~~~~~~dl~~~l~-~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
..+.......++++ .+..++++|.++|+++|.|+||+.++.++.++|+.+++.+++|+--+
T Consensus 244 -----~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 244 -----KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred -----ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 11122233344444 77888999999999999999999999999999999999999987543
No 97
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.12 E-value=2.6e-10 Score=102.54 Aligned_cols=140 Identities=16% Similarity=0.200 Sum_probs=108.0
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchH-----HHHHHHHHHCCcEEEEECCCCCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFF-----EGIARYIAASGYGVYALDHPGFGLSE 188 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~-----~~~~~~l~~~G~~V~~~D~rG~G~S~ 188 (258)
.|...|+..+.+.||..+... -.|..+.+ +|+|++.||.-.++..|. ..++-.|+++||.|..-+.||.-.|.
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lh-RIp~~~~~-rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLH-RIPRGKKK-RPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred cCCceEEEEEEccCCeEEEEe-eecCCCCC-CCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 577799999999999844443 44555444 899999999876665542 45778899999999999999987664
Q ss_pred CCC---------CCCCCHHH-HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC---cccEEEEECcCC
Q 025045 189 GLH---------GYVPSFDA-LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR---AWDGVILVAPMC 255 (258)
Q Consensus 189 ~~~---------~~~~~~~~-~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~---~v~~vvl~~p~~ 255 (258)
... .+..++++ ...|+.+.++++.... ..+++..+|||.|+.....++...|+ +|+..++++|+.
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 321 12234554 4679999999998764 46789999999999999999887765 799999999987
Q ss_pred CC
Q 025045 256 KK 257 (258)
Q Consensus 256 ~l 257 (258)
.+
T Consensus 200 ~~ 201 (403)
T KOG2624|consen 200 FP 201 (403)
T ss_pred hh
Confidence 43
No 98
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.11 E-value=8.1e-10 Score=93.93 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=97.5
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccch--HHHHHHHHHHCCcEEEEECCC-C------CCCCCCCCCCC
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF--FEGIARYIAASGYGVYALDHP-G------FGLSEGLHGYV 194 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~--~~~~~~~l~~~G~~V~~~D~r-G------~G~S~~~~~~~ 194 (258)
...+|....|++|.|.......|.||++||.+++...+ ...|.+...+.||-|+.+|-. + .+.+.++....
T Consensus 40 ~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred cccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 45677788999999877554468999999998876442 224555555679999999632 1 12222222111
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 195 PSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 195 ~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
... +.+..+.++++.+..+..+|.++|++.|.|.||.|+..++..+|+.+.++..+++..
T Consensus 120 ~g~-ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 120 RGV-DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCc-cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 122 457789999999999999999999999999999999999999999999888877643
No 99
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.08 E-value=7e-10 Score=92.41 Aligned_cols=109 Identities=19% Similarity=0.253 Sum_probs=65.1
Q ss_pred ceEEEEEcCCCCCccchHHHHHH-HHHHCCcEEEEECCCC------CCC---CCCC---CCC-----CCCHHHHHHHHHH
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIAR-YIAASGYGVYALDHPG------FGL---SEGL---HGY-----VPSFDALVDNVIE 206 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~-~l~~~G~~V~~~D~rG------~G~---S~~~---~~~-----~~~~~~~~~dl~~ 206 (258)
.++||++||+|++... +..+.. .+......++.++-+. .|. ++-. ... ...+...++.+.+
T Consensus 14 ~~lvi~LHG~G~~~~~-~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 14 KPLVILLHGYGDSEDL-FALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp SEEEEEE--TTS-HHH-HHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCcch-hHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 7899999999998743 333333 2222356777776431 232 2111 000 1123344556666
Q ss_pred HHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 207 IYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 207 ~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+++...+. .++.++|++.|+|+||++|+.++.++|+++.++|+++++.
T Consensus 93 li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 93 LIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred HHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 67765544 4788899999999999999999999999999999999875
No 100
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.06 E-value=4e-09 Score=90.77 Aligned_cols=110 Identities=16% Similarity=0.340 Sum_probs=90.2
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHC---CcEEEEECCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHHHcCCC
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAAS---GYGVYALDHPGFGLSEGL-----HGYVPSFDALVDNVIEIYTKIKGRPE 216 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~---G~~V~~~D~rG~G~S~~~-----~~~~~~~~~~~~dl~~~l~~l~~~~~ 216 (258)
+..++++.|.+|-.++ +..+.+.|.+. .+.|++..+.||-.++.. .....+.+++++-..++++.......
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 5689999999998775 56677777644 799999999999776554 34556899999999999988876432
Q ss_pred CCCCCEEEEEcchHHHHHHHHHHhCC---CcccEEEEECcCC
Q 025045 217 LQGLPCFILGQSMGGAVTIKAHLKEP---RAWDGVILVAPMC 255 (258)
Q Consensus 217 ~~~~~i~l~G~S~Gg~ia~~~a~~~p---~~v~~vvl~~p~~ 255 (258)
....+++++|||+|+.+++.+..+.+ .+|++++++.|.+
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 24668999999999999999999998 6799999999975
No 101
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.05 E-value=1.2e-09 Score=101.12 Aligned_cols=138 Identities=19% Similarity=0.180 Sum_probs=110.2
Q ss_pred ceeeEEEEeCCCCcEEEEEEeecCCCCCcceEEEEEc--CCCCCcc-ch-HHHHHH---HHHHCCcEEEEECCCCCCCCC
Q 025045 116 IRTQEWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCH--GYGDTCT-FF-FEGIAR---YIAASGYGVYALDHPGFGLSE 188 (258)
Q Consensus 116 ~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lH--G~g~~~~-~~-~~~~~~---~l~~~G~~V~~~D~rG~G~S~ 188 (258)
+...+..+...||.+|...+|.|++..+ .|+++..+ -+..... .. ...... .++.+||.|+..|.||.|.|+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~-~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGP-LPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCC-CceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 4455567788999999999999998776 89999999 4432210 11 222334 578899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 189 GLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 189 ~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
|......+ ..++|-.+.|+|+.+++ +.+.+|...|.|++|...+++|...|.-+++++..++..|+
T Consensus 96 G~~~~~~~--~E~~Dg~D~I~Wia~Qp-WsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 96 GVFDPESS--REAEDGYDTIEWLAKQP-WSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cccceecc--ccccchhHHHHHHHhCC-ccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 98665444 46789999999999874 46779999999999999999999888789999999888775
No 102
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.00 E-value=4.7e-09 Score=97.56 Aligned_cols=122 Identities=11% Similarity=0.095 Sum_probs=92.4
Q ss_pred EEEEEEeecCCCCCcceEEEEEcCCCCCccch----HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025045 130 EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF----FEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVI 205 (258)
Q Consensus 130 ~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~----~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~ 205 (258)
.+....|.|......+.+||+++.+-...-.+ -..+.+++.++||.|+++|+++-+.... ..+++++++.+.
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r----~~~ldDYv~~i~ 275 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR----EWGLSTYVDALK 275 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc----CCCHHHHHHHHH
Confidence 35556677754433356799999976332111 1468899999999999999998665532 247889989999
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHH----HHHhCCC-cccEEEEECcCCCC
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIK----AHLKEPR-AWDGVILVAPMCKK 257 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~----~a~~~p~-~v~~vvl~~p~~~l 257 (258)
++++.+.... +.++|.++||||||.+++. ++.++++ +|+.+++++..+|.
T Consensus 276 ~Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 276 EAVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 9999998653 3568999999999999986 7778875 79999998887764
No 103
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.96 E-value=3.5e-09 Score=91.56 Aligned_cols=128 Identities=22% Similarity=0.220 Sum_probs=91.9
Q ss_pred EEEeCCCCcEEEEEEeecC---CCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCH
Q 025045 121 WYERNSKGLEIFCKSWMPK---LGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSF 197 (258)
Q Consensus 121 ~~~~~~~g~~i~~~~~~p~---~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~ 197 (258)
-.++..||.+|........ .++. ...||++.|..+-.+. .+..-=++.||.|+.++.+|++.|.|.+...
T Consensus 217 ~kiks~dgneiDtmF~d~r~n~~~ng-q~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~--- 289 (517)
T KOG1553|consen 217 LKIKSSDGNEIDTMFLDGRPNQSGNG-QDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV--- 289 (517)
T ss_pred EEEeecCCcchhheeecCCCCCCCCC-ceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcc---
Confidence 3446778877776655322 1222 5578899997665332 2333334779999999999999999875432
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 198 DALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 198 ~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
...+.+.+++++.....++..+.|++.|+|.||.-++++|..+|+ |+++||.+.+=|+
T Consensus 290 -n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDl 347 (517)
T KOG1553|consen 290 -NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDL 347 (517)
T ss_pred -cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhh
Confidence 223445556666666666778899999999999999999999996 9999999876553
No 104
>COG0400 Predicted esterase [General function prediction only]
Probab=98.95 E-value=3.7e-09 Score=87.23 Aligned_cols=113 Identities=18% Similarity=0.243 Sum_probs=75.9
Q ss_pred CCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCC--CC----CCCCCC--CCCCHHHHHHHHHHHHHHHHc
Q 025045 142 DQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGF--GL----SEGLHG--YVPSFDALVDNVIEIYTKIKG 213 (258)
Q Consensus 142 ~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~--G~----S~~~~~--~~~~~~~~~~dl~~~l~~l~~ 213 (258)
++..|+||++||+|++..++.. +.+.+.- .+.++.+.-+-- |- +..... ...+.....+.+.++++.+..
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~-~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVP-LPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhh-hhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3337899999999988766444 4444322 355555532210 00 000000 011233345566677777777
Q ss_pred CCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 214 RPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 214 ~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+.+++.++++++|+|.|+++++.+..++|..++++|+.+|+.-
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~ 135 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLP 135 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCC
Confidence 7788999999999999999999999999999999999998764
No 105
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.92 E-value=9.5e-09 Score=87.15 Aligned_cols=130 Identities=16% Similarity=0.076 Sum_probs=77.3
Q ss_pred CcEEEEEEeecCC--CCCcceEEEEEcCCCCCccch-HHHHHHHHHHCC----cEEEEECCCCCCCCCC----------C
Q 025045 128 GLEIFCKSWMPKL--GDQIKGVLFFCHGYGDTCTFF-FEGIARYIAASG----YGVYALDHPGFGLSEG----------L 190 (258)
Q Consensus 128 g~~i~~~~~~p~~--~~~~~p~Vv~lHG~g~~~~~~-~~~~~~~l~~~G----~~V~~~D~rG~G~S~~----------~ 190 (258)
|.++.+.+|.|.+ .....|+|+++||.......+ .......+.+.| ..+++++.-+.+.... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 5677888898877 444479999999972111110 112223233332 3456666655441100 0
Q ss_pred CCCCCCHHHHHHHH-HHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 191 HGYVPSFDALVDNV-IEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 191 ~~~~~~~~~~~~dl-~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.........+.+.+ .+++.++..+..+...+..|.|+||||..|+.++.++|+.+.++++++|.++.
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 00111122222222 24444444444444545899999999999999999999999999999987543
No 106
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.91 E-value=1.9e-08 Score=84.01 Aligned_cols=99 Identities=22% Similarity=0.307 Sum_probs=76.6
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILG 226 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G 226 (258)
+|+++|+.+++... +..+++.+...++.|+.++++|.+... ....++++++++..+.+..... ..++.|+|
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~~-----~gp~~L~G 72 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLARALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQP-----EGPYVLAG 72 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHHHHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHTS-----SSSEEEEE
T ss_pred eEEEEcCCccCHHH-HHHHHHhCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhCC-----CCCeeehc
Confidence 69999999998765 577889886545899999999997322 2235788888888777776553 23899999
Q ss_pred cchHHHHHHHHHHhC---CCcccEEEEECcC
Q 025045 227 QSMGGAVTIKAHLKE---PRAWDGVILVAPM 254 (258)
Q Consensus 227 ~S~Gg~ia~~~a~~~---p~~v~~vvl~~p~ 254 (258)
||+||.+|..+|.+. ...+..++++++.
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 999999999998753 3458889988743
No 107
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.90 E-value=7.1e-08 Score=83.90 Aligned_cols=117 Identities=21% Similarity=0.255 Sum_probs=87.4
Q ss_pred EEEEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccch------HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC
Q 025045 120 EWYERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF------FEGIARYIAASGYGVYALDHPGFGLSEGLHGY 193 (258)
Q Consensus 120 ~~~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~------~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~ 193 (258)
..+....|+..|......-....+ ...|+++-|.++..+.. ...+.+...+.|.+|+.++|||.|.|.|..
T Consensus 113 kRv~Iq~D~~~IDt~~I~~~~a~~-~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 113 KRVPIQYDGVKIDTMAIHQPEAKP-QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eeEEEeeCCEEEEEEEeeCCCCCC-CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 444455688777777654222222 66899999988765541 134555555679999999999999998873
Q ss_pred CCCHHHHHHHHHHHHHHHHcCC-CCCCCCEEEEEcchHHHHHHHHHHhC
Q 025045 194 VPSFDALVDNVIEIYTKIKGRP-ELQGLPCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 194 ~~~~~~~~~dl~~~l~~l~~~~-~~~~~~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
+.++++.|..+.++++..+. +...++|++.|||+||.++...+.++
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 56899999999999998532 45778999999999999988866554
No 108
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.90 E-value=1.2e-08 Score=85.47 Aligned_cols=117 Identities=17% Similarity=0.175 Sum_probs=86.7
Q ss_pred EEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025045 131 IFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTK 210 (258)
Q Consensus 131 i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~ 210 (258)
....++.|..... .|+|+|+||+.-..+ ++..+..++++.||-|+++++-..- . ++-.+.++++.++++|
T Consensus 33 kpLlI~tP~~~G~-yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~---~-----p~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 33 KPLLIVTPSEAGT-YPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLF---P-----PDGQDEIKSAASVINW 102 (307)
T ss_pred CCeEEecCCcCCC-ccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhccc---C-----CCchHHHHHHHHHHHH
Confidence 4445566766655 899999999986655 4677888999999999999985321 1 2233556778888888
Q ss_pred HHcCC--------CCCCCCEEEEEcchHHHHHHHHHHhCC--CcccEEEEECcCCCC
Q 025045 211 IKGRP--------ELQGLPCFILGQSMGGAVTIKAHLKEP--RAWDGVILVAPMCKK 257 (258)
Q Consensus 211 l~~~~--------~~~~~~i~l~G~S~Gg~ia~~~a~~~p--~~v~~vvl~~p~~~l 257 (258)
+.+.. ..+-.++.++|||.||-.|.++|+.+. -++.++|.+.|+-..
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 86431 124568999999999999999998773 247899999987643
No 109
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.89 E-value=4.1e-08 Score=81.50 Aligned_cols=131 Identities=16% Similarity=0.212 Sum_probs=82.1
Q ss_pred EEEEeCCCCcEEEEEEeecCCCCCc-ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCC-CCCCCCCCCCCCH
Q 025045 120 EWYERNSKGLEIFCKSWMPKLGDQI-KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGF-GLSEGLHGYVPSF 197 (258)
Q Consensus 120 ~~~~~~~~g~~i~~~~~~p~~~~~~-~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~-G~S~~~~~~~~~~ 197 (258)
+......+|.+|.++.-.|....+. +++||+..|++..... +..++.+|+.+||+|+.+|--.| |.|+|.-. ..++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh-~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~-eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDH-FAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN-EFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGG-GHHHHHHHHTTT--EEEE---B--------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHH-HHHHHHHHhhCCeEEEeccccccccCCCCChh-hcch
Confidence 3445677889999998888765543 4899999999877554 67899999999999999998776 88887633 3567
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 198 DALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 198 ~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
....+++..+++|+..+ ...++.|+..|+.|-+|+..+.+- .+.-+|..-+++++
T Consensus 82 s~g~~sL~~V~dwl~~~---g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnl 136 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATR---GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNL 136 (294)
T ss_dssp HHHHHHHHHHHHHHHHT---T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-H
T ss_pred HHhHHHHHHHHHHHHhc---CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeH
Confidence 78889999999999965 456799999999999999999843 37777777777764
No 110
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.89 E-value=2.5e-08 Score=83.66 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=66.0
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHH--------HCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC-
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIA--------ASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRP- 215 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~--------~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~- 215 (258)
+.+|||+||.+++... +..++..+. ...++++.+|+......- . ...+.+..+.+.+.++++....
T Consensus 4 g~pVlFIhG~~Gs~~q-~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~--g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQ-VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF--H--GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHhH-HHHHHHHHhhhhhhccCccceeEEEeccCcccccc--c--cccHHHHHHHHHHHHHHHHHhhh
Confidence 3469999999887654 334443331 125788999986542211 1 1234444555555555554332
Q ss_pred --CCCCCCEEEEEcchHHHHHHHHHHhCC---CcccEEEEECc
Q 025045 216 --ELQGLPCFILGQSMGGAVTIKAHLKEP---RAWDGVILVAP 253 (258)
Q Consensus 216 --~~~~~~i~l~G~S~Gg~ia~~~a~~~p---~~v~~vvl~~p 253 (258)
....++|+|+||||||.++..++...+ +.++.+|.++.
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 336778999999999999988876543 46888888754
No 111
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.86 E-value=1.1e-08 Score=82.27 Aligned_cols=89 Identities=22% Similarity=0.346 Sum_probs=61.1
Q ss_pred EEEEcCCCCCccc-hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEE
Q 025045 148 LFFCHGYGDTCTF-FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILG 226 (258)
Q Consensus 148 Vv~lHG~g~~~~~-~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G 226 (258)
|+++||++++... |+..+.+.+... ++|-.+|+ ..++.+.+.+.+.+.+..+ .++++|+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 6899999887654 556677777666 77777776 1245667666655555432 23699999
Q ss_pred cchHHHHHHHHH-HhCCCcccEEEEECcCC
Q 025045 227 QSMGGAVTIKAH-LKEPRAWDGVILVAPMC 255 (258)
Q Consensus 227 ~S~Gg~ia~~~a-~~~p~~v~~vvl~~p~~ 255 (258)
||+|+..++.++ .....+|++++|++|+.
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--S
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCC
Confidence 999999999999 77788999999999985
No 112
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.85 E-value=2.1e-09 Score=95.07 Aligned_cols=111 Identities=13% Similarity=0.133 Sum_probs=68.6
Q ss_pred cceEEEEEcCCCCCc--cchHHHHHHHHHH---CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCC
Q 025045 144 IKGVLFFCHGYGDTC--TFFFEGIARYIAA---SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQ 218 (258)
Q Consensus 144 ~~p~Vv~lHG~g~~~--~~~~~~~~~~l~~---~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~ 218 (258)
.+|++|++|||.++. ..|...+.+.+.+ .+++|+++||...- +..............+.+..+++.|....+++
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a-~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA-SNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH-SS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc-cccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 489999999998776 3456666665544 47999999995221 10000000012334456666777776545678
Q ss_pred CCCEEEEEcchHHHHHHHHHHhCCC--cccEEEEECcCC
Q 025045 219 GLPCFILGQSMGGAVTIKAHLKEPR--AWDGVILVAPMC 255 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~~~p~--~v~~vvl~~p~~ 255 (258)
.++++|+|||+||.+|-.++.+... ++..|..+.|+-
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 8899999999999999999988776 899999988864
No 113
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.85 E-value=2.5e-08 Score=92.32 Aligned_cols=144 Identities=15% Similarity=0.097 Sum_probs=98.5
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCCCC--CcceEEEEEcCCCCCc---cch-H-HH-HHHHHHHCCcEEEEECCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKLGD--QIKGVLFFCHGYGDTC---TFF-F-EG-IARYIAASGYGVYALDHPGFG 185 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~~~--~~~p~Vv~lHG~g~~~---~~~-~-~~-~~~~l~~~G~~V~~~D~rG~G 185 (258)
+-+.-+...+....|..++..+|.|.+-. ++.|+|+++-|..+-- ..| + .. -...|+..||.|+.+|-||.-
T Consensus 609 dy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~ 688 (867)
T KOG2281|consen 609 DYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSA 688 (867)
T ss_pred ccCChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcc
Confidence 33333445556677889999999986522 2279999999986431 111 1 11 124677899999999999853
Q ss_pred CCCCC-CCCC--CCHHHHHHHHHHHHHHHHcCCC-CCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 186 LSEGL-HGYV--PSFDALVDNVIEIYTKIKGRPE-LQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 186 ~S~~~-~~~~--~~~~~~~~dl~~~l~~l~~~~~-~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.-.-. .+.. .--.-.++|-.+.++++..+.+ +|.++|.+.|+|+||.++++...++|+-++.+|.-+|+++.
T Consensus 689 hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W 764 (867)
T KOG2281|consen 689 HRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDW 764 (867)
T ss_pred ccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceee
Confidence 21110 0000 0001124566677777777664 58899999999999999999999999999999999998764
No 114
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.84 E-value=4.2e-08 Score=82.78 Aligned_cols=111 Identities=24% Similarity=0.248 Sum_probs=79.3
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCc--EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGY--GVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~--~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
+.++||+|||..+-+.-....++.....++ .++.+.||+.|.-.+......+......++..+++.+... ....+|
T Consensus 18 ~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~--~~~~~I 95 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA--PGIKRI 95 (233)
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc--cCCceE
Confidence 568999999988765545556666666555 6999999988764332222223445567778888887754 246689
Q ss_pred EEEEcchHHHHHHHHHHh----CC-----CcccEEEEECcCCCC
Q 025045 223 FILGQSMGGAVTIKAHLK----EP-----RAWDGVILVAPMCKK 257 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~----~p-----~~v~~vvl~~p~~~l 257 (258)
.|++||||+.+.+..... .+ .++..+|+.+|-++.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 999999999999887543 21 368899999997764
No 115
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.84 E-value=2.3e-08 Score=87.81 Aligned_cols=121 Identities=14% Similarity=0.205 Sum_probs=83.5
Q ss_pred CcEEEEEEeecCCCCCcceEEEEEcCCCCCcc--c--------hHHHHH---HHHHHCCcEEEEECCCCCC-CCCCCCC-
Q 025045 128 GLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCT--F--------FFEGIA---RYIAASGYGVYALDHPGFG-LSEGLHG- 192 (258)
Q Consensus 128 g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~--~--------~~~~~~---~~l~~~G~~V~~~D~rG~G-~S~~~~~- 192 (258)
+..|.|..|+--+... ..+|++|||+.++.. . ||+.+. +.+.-..|.|++.|..|.. .|.++..
T Consensus 35 ~~~vay~T~Gtln~~~-~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 35 DARVAYETYGTLNAEK-DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred CcEEEEEecccccccC-CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 4578999997655443 568999999977432 1 444332 1222235889999999875 3433321
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE-EEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 193 -----------YVPSFDALVDNVIEIYTKIKGRPELQGLPCF-ILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 193 -----------~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~-l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+..++.++++--+.+++.+..+ ++. ++|-||||+.++.++..+|++++.+|.++...
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~------~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK------KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcc------eEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 2235666666666666777654 555 99999999999999999999999988877543
No 116
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.76 E-value=9.2e-09 Score=85.61 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=57.1
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcE---EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYG---VYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCF 223 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~---V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~ 223 (258)
+|||+||.+++...-|..+++.|.++||. |++++|-........... ....+.+.++.++++.+.... .. +|-
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~T--Ga-kVD 78 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYT--GA-KVD 78 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHH--T---EE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhh--CC-EEE
Confidence 49999999985555577899999999998 899999433221111000 011234578999999887542 35 899
Q ss_pred EEEcchHHHHHHHHHHhC
Q 025045 224 ILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 224 l~G~S~Gg~ia~~~a~~~ 241 (258)
|+||||||.++.++.+-.
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 999999999999998643
No 117
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.75 E-value=1.2e-08 Score=82.34 Aligned_cols=122 Identities=14% Similarity=0.137 Sum_probs=86.8
Q ss_pred CCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHH-HHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q 025045 125 NSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEG-IARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDN 203 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~-~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~d 203 (258)
-.+|.++.|..++.. . ..|+++.|.-++....|.. +.......-+.|++.|-||+|.|..+... ...+.+.+|
T Consensus 27 ~vng~ql~y~~~G~G--~---~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rk-f~~~ff~~D 100 (277)
T KOG2984|consen 27 HVNGTQLGYCKYGHG--P---NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERK-FEVQFFMKD 100 (277)
T ss_pred eecCceeeeeecCCC--C---ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCccc-chHHHHHHh
Confidence 346788999887432 2 2588899975554332332 32222223489999999999999876433 345566667
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 204 VIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 204 l~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
...+++-+... +-.++.+.|+|=||..|+..|.++++.|..+|.++...
T Consensus 101 a~~avdLM~aL---k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 101 AEYAVDLMEAL---KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA 149 (277)
T ss_pred HHHHHHHHHHh---CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc
Confidence 76666655532 45589999999999999999999999999999987654
No 118
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.74 E-value=3.5e-08 Score=81.20 Aligned_cols=111 Identities=16% Similarity=0.183 Sum_probs=79.8
Q ss_pred EeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC--CCCHHH-
Q 025045 123 ERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGY--VPSFDA- 199 (258)
Q Consensus 123 ~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~--~~~~~~- 199 (258)
+...||..+....|-.... .+-.+.+-|..+-...++..++..++.+||.|+.+||||.|.|...... ...+.+
T Consensus 10 l~~~DG~~l~~~~~pA~~~---~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGK---ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccCCCccCccccccCCCC---CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 3566787788777743322 2234555555555566788999999999999999999999999865432 223433
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHH
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAH 238 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a 238 (258)
...|+.+++++++... ...+.+++|||+||.+.-.+.
T Consensus 87 A~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 87 ARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred hhcchHHHHHHHHhhC--CCCceEEeeccccceeecccc
Confidence 4569999999988642 466899999999999765443
No 119
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.72 E-value=5.7e-07 Score=82.00 Aligned_cols=137 Identities=12% Similarity=0.026 Sum_probs=82.7
Q ss_pred eeEEEEeCCCCcEEEEEEeecCCC-CCcceEEEEEcCCCCCccchHHHHHHHHHHCC----cEEEEECCCCC-CCCCCCC
Q 025045 118 TQEWYERNSKGLEIFCKSWMPKLG-DQIKGVLFFCHGYGDTCTFFFEGIARYIAASG----YGVYALDHPGF-GLSEGLH 191 (258)
Q Consensus 118 ~~~~~~~~~~g~~i~~~~~~p~~~-~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G----~~V~~~D~rG~-G~S~~~~ 191 (258)
....+....-|.+..+.+|.|... .+..|+|+++||-.-............+.+.| ..++.+|..+. .++....
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~ 260 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP 260 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCC
Confidence 334444555677889999998653 23379999999943111111233445555565 34677775321 1111110
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 192 GYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 192 ~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
......+..++++.-.++..- ....+.++.+|.|+||||..|+.+++++|+.+.+++..+|.+
T Consensus 261 ~~~~f~~~l~~eLlP~I~~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 261 CNADFWLAVQQELLPQVRAIA-PFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred chHHHHHHHHHHHHHHHHHhC-CCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 000012223445544444421 112366789999999999999999999999999999999864
No 120
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.71 E-value=1.6e-07 Score=81.18 Aligned_cols=108 Identities=18% Similarity=0.300 Sum_probs=70.9
Q ss_pred ceEEEEEcCCCCCc--cchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCC--CCCC
Q 025045 145 KGVLFFCHGYGDTC--TFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPE--LQGL 220 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~--~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~--~~~~ 220 (258)
..+|||+.|.+... -.|...+++.|...||.|+-+.++....-.| ..+++.-++|+.++++++..... ...+
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G----~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG----TSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-----S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC----cchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 45899999987532 2357889999988899999998763211111 14678889999999999986521 2466
Q ss_pred CEEEEEcchHHHHHHHHHHhCC-----CcccEEEEECcCCC
Q 025045 221 PCFILGQSMGGAVTIKAHLKEP-----RAWDGVILVAPMCK 256 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~p-----~~v~~vvl~~p~~~ 256 (258)
+|+|+|||-|++-++.|+.... ..|+++||-+|+.|
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 8999999999999999987642 46999999999886
No 121
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.71 E-value=7e-08 Score=87.04 Aligned_cols=109 Identities=23% Similarity=0.338 Sum_probs=63.4
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCC------CCC----C--------------CCC--CC--
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLS------EGL----H--------------GYV--PS-- 196 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S------~~~----~--------------~~~--~~-- 196 (258)
.|+|||.||++++... +..++..|+++||.|+++|+|..-.. ++. . ... ..
T Consensus 100 ~PvvIFSHGlgg~R~~-yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTS-YSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp EEEEEEE--TT--TTT-THHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCEEEEeCCCCcchhh-HHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 8999999999999876 56788999999999999999954111 000 0 000 00
Q ss_pred ------HHHHHHHHHHHHHHHHc---C-----------------CCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEE
Q 025045 197 ------FDALVDNVIEIYTKIKG---R-----------------PELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVIL 250 (258)
Q Consensus 197 ------~~~~~~dl~~~l~~l~~---~-----------------~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl 250 (258)
.+.-+.|+..+++.+.. . ..+|.++|.+.|||+||+.++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 11224566666665541 0 123456799999999999999988777 47898888
Q ss_pred ECcCC
Q 025045 251 VAPMC 255 (258)
Q Consensus 251 ~~p~~ 255 (258)
+.|..
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 87753
No 122
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.71 E-value=8.7e-08 Score=93.34 Aligned_cols=132 Identities=20% Similarity=0.215 Sum_probs=95.8
Q ss_pred CCCCcEEEEEEeecCC---CCCcceEEEEEcCCCCCc---cchHHHHHHH-HHHCCcEEEEECCCCCCCCCCCCCC--CC
Q 025045 125 NSKGLEIFCKSWMPKL---GDQIKGVLFFCHGYGDTC---TFFFEGIARY-IAASGYGVYALDHPGFGLSEGLHGY--VP 195 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~---~~~~~p~Vv~lHG~g~~~---~~~~~~~~~~-l~~~G~~V~~~D~rG~G~S~~~~~~--~~ 195 (258)
.-+|....+....|+. +++ -|.+|.+||..++. ..+.-.+... +...|+.|+.+|.||-|......-. ..
T Consensus 504 ~~~~~~~~~~~~lP~~~~~~~k-yPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~ 582 (755)
T KOG2100|consen 504 EIDGITANAILILPPNFDPSKK-YPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPR 582 (755)
T ss_pred EeccEEEEEEEecCCCCCCCCC-CCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhh
Confidence 3388899999999854 333 79999999987632 1122234444 5567999999999998754332100 00
Q ss_pred CH-HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCc-ccEEEEECcCCCC
Q 025045 196 SF-DALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRA-WDGVILVAPMCKK 257 (258)
Q Consensus 196 ~~-~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~-v~~vvl~~p~~~l 257 (258)
.+ ...++|...+++++.+..-+|.++|.++|+|.||.++++++...++. +++.++++|++|+
T Consensus 583 ~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~ 646 (755)
T KOG2100|consen 583 NLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDW 646 (755)
T ss_pred hcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeee
Confidence 11 12367888888888887778999999999999999999999999854 5566999999986
No 123
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.70 E-value=5.3e-08 Score=78.78 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=83.3
Q ss_pred EEEEEEeecCCCCCcceEEEEEcCC-C--CCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 025045 130 EIFCKSWMPKLGDQIKGVLFFCHGY-G--DTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIE 206 (258)
Q Consensus 130 ~i~~~~~~p~~~~~~~p~Vv~lHG~-g--~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~ 206 (258)
.-.+.+|+|... .+.+||+||. + ++... ....+..+.+.||+|.+++|- .+.. ..+.+..+.++..
T Consensus 55 ~q~VDIwg~~~~---~klfIfIHGGYW~~g~rk~-clsiv~~a~~~gY~vasvgY~---l~~q----~htL~qt~~~~~~ 123 (270)
T KOG4627|consen 55 RQLVDIWGSTNQ---AKLFIFIHGGYWQEGDRKM-CLSIVGPAVRRGYRVASVGYN---LCPQ----VHTLEQTMTQFTH 123 (270)
T ss_pred ceEEEEecCCCC---ccEEEEEecchhhcCchhc-ccchhhhhhhcCeEEEEeccC---cCcc----cccHHHHHHHHHH
Confidence 556778887544 4589999994 2 33333 234567777899999999873 2221 1367788888888
Q ss_pred HHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCC-CcccEEEEECcCCCC
Q 025045 207 IYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEP-RAWDGVILVAPMCKK 257 (258)
Q Consensus 207 ~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p-~~v~~vvl~~p~~~l 257 (258)
.++++.+... ..+.+.+.|||.|+.++.++..+.. .+|.++++.|+++++
T Consensus 124 gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l 174 (270)
T KOG4627|consen 124 GVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL 174 (270)
T ss_pred HHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH
Confidence 8888876533 3446889999999999998876543 379999999988765
No 124
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.69 E-value=1.3e-07 Score=92.45 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=76.4
Q ss_pred HHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC--------------CCCCCCCEEEEEcch
Q 025045 164 GIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGR--------------PELQGLPCFILGQSM 229 (258)
Q Consensus 164 ~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~--------------~~~~~~~i~l~G~S~ 229 (258)
.+.++++.+||.|+..|.||.|.|+|.... ......+|..++|+|+..+ ..+...+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 456788999999999999999999986432 1245678999999999843 233467999999999
Q ss_pred HHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 230 GGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 230 Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
||.+++.+|...|..++++|.++++.+.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcH
Confidence 9999999999888889999999988753
No 125
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.68 E-value=1e-07 Score=83.86 Aligned_cols=113 Identities=22% Similarity=0.269 Sum_probs=83.3
Q ss_pred CCCcEEEEEEeecCCCCC-----cceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCC--CCCCCCCCC----C
Q 025045 126 SKGLEIFCKSWMPKLGDQ-----IKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGF--GLSEGLHGY----V 194 (258)
Q Consensus 126 ~~g~~i~~~~~~p~~~~~-----~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~--G~S~~~~~~----~ 194 (258)
..+.++...+|.|..... ..|+|++-||.|+.... +..+++.+++.||.|.++|.+|- |........ .
T Consensus 47 ~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~-f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~ 125 (365)
T COG4188 47 QRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTG-FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYA 125 (365)
T ss_pred ccCCccccceeccCCCccccccCcCCeEEecCCCCCCccc-hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccc
Confidence 346677777887765433 47999999999998766 67899999999999999999984 333221111 1
Q ss_pred -CCHHHHHHHHHHHHHHHHcC---C----CCCCCCEEEEEcchHHHHHHHHHH
Q 025045 195 -PSFDALVDNVIEIYTKIKGR---P----ELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 195 -~~~~~~~~dl~~~l~~l~~~---~----~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
..+-+...|+..+++++.+. + .++..+|.++|||+||..++..+.
T Consensus 126 p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 126 PAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred hhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 12334567888888888766 3 357789999999999999988764
No 126
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.67 E-value=2.8e-07 Score=75.04 Aligned_cols=88 Identities=18% Similarity=0.387 Sum_probs=61.0
Q ss_pred EEEEcCCCCCccch-HHHHHHHHHHCC--cEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 148 LFFCHGYGDTCTFF-FEGIARYIAASG--YGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 148 Vv~lHG~g~~~~~~-~~~~~~~l~~~G--~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
|+++||+.++.... ...+.+.+++.+ ..+..+|++ ...+...+.+.+.++... .+.+.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~------~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELK------PENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCC------CCCeEE
Confidence 89999998876543 334566776655 345566653 234455556666655543 235999
Q ss_pred EEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 225 LGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+|.||||..|.+++.+++ +++ ||+.|.+.
T Consensus 64 iGSSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred EEEChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 999999999999998885 455 88888765
No 127
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.66 E-value=1.4e-07 Score=86.41 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=71.8
Q ss_pred chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 160 FFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 160 ~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+|..+.+.|.+.||.+ ..|++|+|.+.... ...+...+++.+.++.+.... ..++++|+||||||.++..++.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHHHHH
Confidence 45788999999999865 88999999987652 235667788888888876542 3568999999999999999998
Q ss_pred hCCCc----ccEEEEECcCC
Q 025045 240 KEPRA----WDGVILVAPMC 255 (258)
Q Consensus 240 ~~p~~----v~~vvl~~p~~ 255 (258)
.+|+. |+.+|++++..
T Consensus 182 ~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HCCHhHHhHhccEEEECCCC
Confidence 88764 78888887754
No 128
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.64 E-value=2.4e-07 Score=81.04 Aligned_cols=112 Identities=22% Similarity=0.215 Sum_probs=85.5
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCc--EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGY--GVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~--~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
+.++||+||+..+-+.-...+++.+.+.|+ ..+.+.|+..|.--+......+......+++.+++++..... -.+|
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--~~~I 193 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--VKRI 193 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--CceE
Confidence 678999999987765555667888888776 468899998887555443334555667899999999987643 4579
Q ss_pred EEEEcchHHHHHHHHHHh--------CCCcccEEEEECcCCCCC
Q 025045 223 FILGQSMGGAVTIKAHLK--------EPRAWDGVILVAPMCKKK 258 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~--------~p~~v~~vvl~~p~~~l~ 258 (258)
+|++||||..+++....+ .+.+++.+||-+|=.|.+
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 999999999999877654 234689999999977753
No 129
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.62 E-value=1.5e-06 Score=74.02 Aligned_cols=123 Identities=20% Similarity=0.259 Sum_probs=93.3
Q ss_pred eCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHH-----HHHHHHHCCcEEEEECCCCCCCCCC--CCC-CCC
Q 025045 124 RNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEG-----IARYIAASGYGVYALDHPGFGLSEG--LHG-YVP 195 (258)
Q Consensus 124 ~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~-----~~~~l~~~G~~V~~~D~rG~G~S~~--~~~-~~~ 195 (258)
.+.. ..+++.+++..++ + +|++|=.|..|-+....+.. -+..+.++ |.|+-+|-+|+-.-.. +.+ ..+
T Consensus 28 ~T~~-G~v~V~V~Gd~~~-~-kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yP 103 (326)
T KOG2931|consen 28 ETAH-GVVHVTVYGDPKG-N-KPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYP 103 (326)
T ss_pred cccc-ccEEEEEecCCCC-C-CceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCC
Confidence 3444 4678888875554 3 78899999998665432222 23445555 9999999999854322 223 346
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 196 SFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 196 ~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+.++.++++..+++++.-+ .|+-+|--.|+++-.++|.+||++|-|+||+.+...
T Consensus 104 smd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 104 SMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred CHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 8999999999999998865 588999999999999999999999999999987653
No 130
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.62 E-value=1e-07 Score=88.93 Aligned_cols=119 Identities=15% Similarity=0.139 Sum_probs=75.8
Q ss_pred EEEEEeecCCC--CCcceEEEEEcCCC---CCccchHHHHHHHHHH-CC-cEEEEECCC-C---CCCCCCCCCCCCCHHH
Q 025045 131 IFCKSWMPKLG--DQIKGVLFFCHGYG---DTCTFFFEGIARYIAA-SG-YGVYALDHP-G---FGLSEGLHGYVPSFDA 199 (258)
Q Consensus 131 i~~~~~~p~~~--~~~~p~Vv~lHG~g---~~~~~~~~~~~~~l~~-~G-~~V~~~D~r-G---~G~S~~~~~~~~~~~~ 199 (258)
++..+|.|... .+..|+||++||.+ ++...+ ....++. .+ +.|+.++|| | +..+... ......
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~ 152 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNY 152 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcch
Confidence 55566777642 23379999999964 222221 1233333 33 899999999 3 2222111 111123
Q ss_pred HHHHHHHHHHHHHcC---CCCCCCCEEEEEcchHHHHHHHHHHhC--CCcccEEEEECcCC
Q 025045 200 LVDNVIEIYTKIKGR---PELQGLPCFILGQSMGGAVTIKAHLKE--PRAWDGVILVAPMC 255 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~---~~~~~~~i~l~G~S~Gg~ia~~~a~~~--p~~v~~vvl~~p~~ 255 (258)
-..|...+++|+..+ .+.|+++|.|.|+|.||.++..++... +..++++|+.++..
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 356888888888754 345888999999999999998887652 34688888887654
No 131
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.58 E-value=2.5e-06 Score=79.04 Aligned_cols=141 Identities=16% Similarity=0.216 Sum_probs=92.8
Q ss_pred CCceeeEEEEeCC---CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHH-----------HH-------HHHC
Q 025045 114 SGIRTQEWYERNS---KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIA-----------RY-------IAAS 172 (258)
Q Consensus 114 ~~~~~~~~~~~~~---~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~-----------~~-------l~~~ 172 (258)
.+++....|+.-. .+..++|..|........+|+|++++|.+|.++. ...+. .. +.+
T Consensus 43 ~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~- 120 (462)
T PTZ00472 43 PSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN- 120 (462)
T ss_pred CCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc-
Confidence 3444444554432 3678999999766544447999999998766542 11110 00 111
Q ss_pred CcEEEEECC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHcC-CCCCCCCEEEEEcchHHHHHHHHHHhC--------
Q 025045 173 GYGVYALDH-PGFGLSEGLHG-YVPSFDALVDNVIEIYTKIKGR-PELQGLPCFILGQSMGGAVTIKAHLKE-------- 241 (258)
Q Consensus 173 G~~V~~~D~-rG~G~S~~~~~-~~~~~~~~~~dl~~~l~~l~~~-~~~~~~~i~l~G~S~Gg~ia~~~a~~~-------- 241 (258)
-.+++.+|. .|+|.|..... ...+.+..++|+.++++...++ ++....+++|+|+|+||..+..+|.+-
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~ 200 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGD 200 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccC
Confidence 256888886 58988865432 2345678899999999876543 334567999999999999987776541
Q ss_pred --CCcccEEEEECcCCC
Q 025045 242 --PRAWDGVILVAPMCK 256 (258)
Q Consensus 242 --p~~v~~vvl~~p~~~ 256 (258)
+-.++++++-.|+++
T Consensus 201 ~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 201 GLYINLAGLAVGNGLTD 217 (462)
T ss_pred CceeeeEEEEEeccccC
Confidence 113789998888765
No 132
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.54 E-value=4.8e-07 Score=79.25 Aligned_cols=121 Identities=19% Similarity=0.224 Sum_probs=84.6
Q ss_pred CCCCcEEEEEEeecCCCC--CcceEEEEEcCCCCCccchHHHHHHHHHHC---------CcEEEEECCCCCCCCCCCCCC
Q 025045 125 NSKGLEIFCKSWMPKLGD--QIKGVLFFCHGYGDTCTFFFEGIARYIAAS---------GYGVYALDHPGFGLSEGLHGY 193 (258)
Q Consensus 125 ~~~g~~i~~~~~~p~~~~--~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~---------G~~V~~~D~rG~G~S~~~~~~ 193 (258)
.-.|..|++....|.+.+ +.--+++++|||+|+...++ .+...|.+- -|.|+++.++|+|.|+++...
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFy-kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~ 208 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFY-KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT 208 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHH-hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC
Confidence 345667777776655322 11246999999999877654 356666543 268999999999999987543
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEEC
Q 025045 194 VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVA 252 (258)
Q Consensus 194 ~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~ 252 (258)
-.... .+..+++.+..+.+ -.+..|-|--+|+.++..+|..+|+.|.|+-+.-
T Consensus 209 GFn~~----a~ArvmrkLMlRLg--~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 209 GFNAA----ATARVMRKLMLRLG--YNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred CccHH----HHHHHHHHHHHHhC--cceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 32322 34445555554432 3379999999999999999999999998876643
No 133
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.53 E-value=1.6e-06 Score=77.19 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=71.8
Q ss_pred ceEEEEEcCCCCCc---cch---HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCC
Q 025045 145 KGVLFFCHGYGDTC---TFF---FEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQ 218 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~---~~~---~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~ 218 (258)
.|+||++||.|-.- ... +..+.+.+. ...+++.||.-... ...+ ..+..+..++.+.++++.+.. +
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~--~~~~--~~yPtQL~qlv~~Y~~Lv~~~--G 193 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS--DEHG--HKYPTQLRQLVATYDYLVESE--G 193 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc--ccCC--CcCchHHHHHHHHHHHHHhcc--C
Confidence 68999999986322 111 223344443 45899999864320 0111 245577788999999998432 4
Q ss_pred CCCEEEEEcchHHHHHHHHHHh--CC---CcccEEEEECcCCCC
Q 025045 219 GLPCFILGQSMGGAVTIKAHLK--EP---RAWDGVILVAPMCKK 257 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~~--~p---~~v~~vvl~~p~~~l 257 (258)
.++|+|+|.|.||++++.+.+. .. ...+.+||++|++++
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 5689999999999999888643 21 236899999999986
No 134
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.53 E-value=1.2e-06 Score=75.07 Aligned_cols=118 Identities=24% Similarity=0.383 Sum_probs=78.1
Q ss_pred EEEEEEeecCCCCCcceEEEEEcCCCCCccchHHH-----HHHHHHHCCcEEEEECCCCCCCCCC--CCC-CCCCHHHHH
Q 025045 130 EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEG-----IARYIAASGYGVYALDHPGFGLSEG--LHG-YVPSFDALV 201 (258)
Q Consensus 130 ~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~-----~~~~l~~~G~~V~~~D~rG~G~S~~--~~~-~~~~~~~~~ 201 (258)
.+++.+++..+++ +|++|=.|-.|-+....+.. -...+. ..|.|+-+|-||+..-.. +.+ ..++.++++
T Consensus 10 ~v~V~v~G~~~~~--kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LA 86 (283)
T PF03096_consen 10 SVHVTVQGDPKGN--KPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLA 86 (283)
T ss_dssp EEEEEEESS--TT--S-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHH
T ss_pred EEEEEEEecCCCC--CceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHH
Confidence 6777777654442 89999999998765431221 233443 459999999999965332 223 346899999
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+++..+++++..+ .++-+|--.|+++-.++|.++|+++.|+||+.|.+.
T Consensus 87 e~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 87 EMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVNPTCT 135 (283)
T ss_dssp CTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S
T ss_pred HHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEecCCC
Confidence 9999999999875 699999999999999999999999999999998654
No 135
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.53 E-value=4.3e-07 Score=77.37 Aligned_cols=109 Identities=17% Similarity=0.235 Sum_probs=69.9
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHH-HCCc--EEEE--ECCCCC----CCCCC----C------CCCC-CCHHHHHHHH
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIA-ASGY--GVYA--LDHPGF----GLSEG----L------HGYV-PSFDALVDNV 204 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~-~~G~--~V~~--~D~rG~----G~S~~----~------~~~~-~~~~~~~~dl 204 (258)
..+.||+|||+++... +..+.+.+. +.|. .++. ++--|. |.-.. + .... .++...+.++
T Consensus 11 ~tPTifihG~~gt~~s-~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANS-FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp -EEEEEE--TTGGCCC-CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCcEEEECCCCCChhH-HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 3469999999988765 567888886 5554 2333 333332 22111 0 1112 3577889999
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC-----cccEEEEECcCCC
Q 025045 205 IEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR-----AWDGVILVAPMCK 256 (258)
Q Consensus 205 ~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~-----~v~~vvl~~p~~~ 256 (258)
..++.+|.++.++. ++.++||||||..++.++..+.+ ++..+|.+++.++
T Consensus 90 ~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 99999999986644 69999999999999999887532 4788888866544
No 136
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.49 E-value=5.1e-07 Score=73.43 Aligned_cols=128 Identities=26% Similarity=0.406 Sum_probs=86.5
Q ss_pred CCcEEEEEEeecCCC--CCcceEEEEEcCCCCCccchHH--HHHHHHHHCCcEEEEECC--CCC---CCCCCCC------
Q 025045 127 KGLEIFCKSWMPKLG--DQIKGVLFFCHGYGDTCTFFFE--GIARYIAASGYGVYALDH--PGF---GLSEGLH------ 191 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~--~~~~p~Vv~lHG~g~~~~~~~~--~~~~~l~~~G~~V~~~D~--rG~---G~S~~~~------ 191 (258)
-+-.+.+-+|.|... .+.-|+++++-|...+.+.+.+ .+.+...+.|+.|+.+|- ||. |+++...
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 345778888888642 2226899999999877665543 456666678999999994 443 2222110
Q ss_pred --------CCC---CCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 192 --------GYV---PSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 192 --------~~~---~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
.+. .-++..++++.+.+.. ....+|..++.|.||||||.-|+..+++.|.+.+.+-..+|.++
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~--~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNS--ANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhcc--ccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 000 0122233444444432 23346788899999999999999999999999999999988876
No 137
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.49 E-value=1.3e-06 Score=74.32 Aligned_cols=101 Identities=23% Similarity=0.346 Sum_probs=78.3
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
|+++++|+.+|.... +..++..+... ..|+..+.+|.+.-. ....+++++++...+.|..+.- ..+++|+
T Consensus 1 ~pLF~fhp~~G~~~~-~~~L~~~l~~~-~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~QP-----~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLA-YAPLAAALGPL-LPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQP-----EGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHH-HHHHHHHhccC-ceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhCC-----CCCEEEE
Confidence 469999999988765 66788888665 899999999987532 2235788888888888877663 4489999
Q ss_pred EcchHHHHHHHHHHhC---CCcccEEEEECcCCC
Q 025045 226 GQSMGGAVTIKAHLKE---PRAWDGVILVAPMCK 256 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~---p~~v~~vvl~~p~~~ 256 (258)
|||+||++|..+|.+. .+.|..++++.+...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999998763 346888888776543
No 138
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.46 E-value=3.5e-06 Score=76.19 Aligned_cols=103 Identities=10% Similarity=0.077 Sum_probs=79.5
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
|.|+++--+.++.......+.+.|.+ |+.|+..||..-+..+.... ..+++++++-+.++++.+. . ++.++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~-~f~ldDYi~~l~~~i~~~G------~-~v~l~ 173 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAG-KFDLEDYIDYLIEFIRFLG------P-DIHVI 173 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcC-CCCHHHHHHHHHHHHHHhC------C-CCcEE
Confidence 68999999887765556778898888 99999999987764421111 2478899888888887773 2 38999
Q ss_pred EcchHHHHHHHHHHhC-----CCcccEEEEECcCCCC
Q 025045 226 GQSMGGAVTIKAHLKE-----PRAWDGVILVAPMCKK 257 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~-----p~~v~~vvl~~p~~~l 257 (258)
|+|+||.+++.++... |.+++.++++++.+|.
T Consensus 174 GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 174 AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 9999999987665443 6679999999888774
No 139
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.45 E-value=1.3e-06 Score=90.41 Aligned_cols=100 Identities=17% Similarity=0.244 Sum_probs=78.7
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
.+.++++||++++... |..+.+.+. .++.|+.+|.+|+|.... ...+++.+++++.+.++.+.. ..++++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~l~-~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~-----~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRYLD-PQWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP-----HGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHhcC-CCCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC-----CCCEEE
Confidence 3569999999988654 667777774 469999999999986532 235888999998888876542 337999
Q ss_pred EEcchHHHHHHHHHHh---CCCcccEEEEECcC
Q 025045 225 LGQSMGGAVTIKAHLK---EPRAWDGVILVAPM 254 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~---~p~~v~~vvl~~p~ 254 (258)
+||||||.++..+|.+ .++++..++++.+.
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999999999999985 46788888887653
No 140
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.43 E-value=1.5e-05 Score=70.01 Aligned_cols=126 Identities=14% Similarity=0.236 Sum_probs=88.5
Q ss_pred CcEEEEEEeecCCCCCcceEEEEEcCCCCCcc--chHHHHHHHHHHCCcEEEEECCCCC--CCCC--------------C
Q 025045 128 GLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCT--FFFEGIARYIAASGYGVYALDHPGF--GLSE--------------G 189 (258)
Q Consensus 128 g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~--~~~~~~~~~l~~~G~~V~~~D~rG~--G~S~--------------~ 189 (258)
|.+-+..+|.|..+.+.+.+||++||++.+.. .....+.+.|.+.||+++++..+.- .... .
T Consensus 70 ~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~ 149 (310)
T PF12048_consen 70 GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQ 149 (310)
T ss_pred CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCC
Confidence 45566667888766655889999999998764 2366788899999999999988861 1000 0
Q ss_pred CCCC----------------CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC-cccEEEEEC
Q 025045 190 LHGY----------------VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR-AWDGVILVA 252 (258)
Q Consensus 190 ~~~~----------------~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~-~v~~vvl~~ 252 (258)
.... ....+....-+.+++.++..+ ...+++|+||+.|+..++.+..+.+. .++++|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~ 226 (310)
T PF12048_consen 150 QLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLIN 226 (310)
T ss_pred CcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEe
Confidence 0000 001234455566666666655 34459999999999999999988764 489999999
Q ss_pred cCCC
Q 025045 253 PMCK 256 (258)
Q Consensus 253 p~~~ 256 (258)
|...
T Consensus 227 a~~p 230 (310)
T PF12048_consen 227 AYWP 230 (310)
T ss_pred CCCC
Confidence 8753
No 141
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.42 E-value=1e-06 Score=82.39 Aligned_cols=143 Identities=14% Similarity=0.106 Sum_probs=99.6
Q ss_pred CceeeEEEEeCCCCcEEEEEEeecCC--CCCcceEEEEEcCC-CCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCC-
Q 025045 115 GIRTQEWYERNSKGLEIFCKSWMPKL--GDQIKGVLFFCHGY-GDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGL- 190 (258)
Q Consensus 115 ~~~~~~~~~~~~~g~~i~~~~~~p~~--~~~~~p~Vv~lHG~-g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~- 190 (258)
....+.......||.+|.+.++.-.+ -..+.|++++.-|. |.+....+....--|.++||.......||-|+-...
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~W 495 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAW 495 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHH
Confidence 34455555556889888887776543 22237888888884 333333344344456689998777888987764321
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 191 --HGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 191 --~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.+....-....+|..++.++|.+......++|++.|-|.||++....+.+.|+.++++|+-.|++|+
T Consensus 496 Ye~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 496 YEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred HHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 0100111123567888888888775567779999999999999999999999999999999999985
No 142
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.37 E-value=3.9e-06 Score=66.55 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=62.5
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
+.++++||++++...+|.. .+.++--.+-.+++. ....+..++|++.+.+.+..+ .++++|+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~---~we~~l~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-------~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQS---RWESALPNARRVEQD--------DWEAPVLDDWIARLEKEVNAA-------EGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChhHHHH---HHHhhCccchhcccC--------CCCCCCHHHHHHHHHHHHhcc-------CCCeEEE
Confidence 4599999998887654432 222221223333332 122246777777766666554 2269999
Q ss_pred EcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 226 GQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+||+|+..+++++.+...+|+|++|++|+-
T Consensus 65 AHSLGc~~v~h~~~~~~~~V~GalLVAppd 94 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQVAGALLVAPPD 94 (181)
T ss_pred EecccHHHHHHHHHhhhhccceEEEecCCC
Confidence 999999999999988766899999999863
No 143
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=6e-07 Score=83.44 Aligned_cols=143 Identities=16% Similarity=0.065 Sum_probs=101.8
Q ss_pred CceeeEEEEeCCCCcEEEEEEeecCC--CCCcceEEEEEcCCCC-CccchHHHHHHHHHHCCcEEEEECCCCCCCC---C
Q 025045 115 GIRTQEWYERNSKGLEIFCKSWMPKL--GDQIKGVLFFCHGYGD-TCTFFFEGIARYIAASGYGVYALDHPGFGLS---E 188 (258)
Q Consensus 115 ~~~~~~~~~~~~~g~~i~~~~~~p~~--~~~~~p~Vv~lHG~g~-~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S---~ 188 (258)
....+...+...||..+...+..... ...++|.+++.||..+ +-...|..-...|.+.|+.....|.||-|.- +
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccch
Confidence 44567777788999877766665322 1112788888887533 2222232222334468988888899997653 3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 189 GLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 189 ~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
...+....-+...+|..+..++|..+.-...++..+.|.|.||.++..++.++|+.+.++|+-.|+.|+
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 333333334456788999999998875567889999999999999999999999999999999999875
No 144
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.34 E-value=3.1e-06 Score=68.33 Aligned_cols=101 Identities=20% Similarity=0.225 Sum_probs=78.7
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILG 226 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G 226 (258)
.+||+-|=|+-.. +-..+++.|+++|+.|+.+|-+-+=.+ ..+.++.+.|+..++++..++ +..++++|+|
T Consensus 4 ~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~------~rtP~~~a~Dl~~~i~~y~~~--w~~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWS------ERTPEQTAADLARIIRHYRAR--WGRKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhh------hCCHHHHHHHHHHHHHHHHHH--hCCceEEEEe
Confidence 5788888766543 356799999999999999996543332 246778899999999988875 4567899999
Q ss_pred cchHHHHHHHHHHhCC----CcccEEEEECcCCC
Q 025045 227 QSMGGAVTIKAHLKEP----RAWDGVILVAPMCK 256 (258)
Q Consensus 227 ~S~Gg~ia~~~a~~~p----~~v~~vvl~~p~~~ 256 (258)
+|+|+-+.-....+.| ++|+.++|++|...
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999988777766655 46999999998654
No 145
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.33 E-value=9.1e-06 Score=63.53 Aligned_cols=102 Identities=21% Similarity=0.289 Sum_probs=67.9
Q ss_pred ceEEEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEECCCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCC
Q 025045 145 KGVLFFCHGYGDTCT-FFFEGIARYIAASGYGVYALDHPGF-----GLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQ 218 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D~rG~-----G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~ 218 (258)
..+||+.||.|.+.+ .++...+..++..|+.|..|+++-. |.-..++....-...+...+.+ +... .+
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aq----l~~~--l~ 87 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQ----LRAG--LA 87 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHH----HHhc--cc
Confidence 468999999886653 3577889999999999999997643 2111222111112233333333 3322 24
Q ss_pred CCCEEEEEcchHHHHHHHHHHhCCCcccEEEEEC
Q 025045 219 GLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVA 252 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~ 252 (258)
..+.++-|+||||-++.+++....-.|+++++++
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred CCceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 5589999999999999999877655588887763
No 146
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.31 E-value=1.7e-06 Score=81.06 Aligned_cols=121 Identities=17% Similarity=0.065 Sum_probs=72.7
Q ss_pred EEEEEeecCCCCC--cceEEEEEcCCC---CCccchHHHHHHHHHHCCcEEEEECCCC----CCCCCCCCCCCCCHHHHH
Q 025045 131 IFCKSWMPKLGDQ--IKGVLFFCHGYG---DTCTFFFEGIARYIAASGYGVYALDHPG----FGLSEGLHGYVPSFDALV 201 (258)
Q Consensus 131 i~~~~~~p~~~~~--~~p~Vv~lHG~g---~~~~~~~~~~~~~l~~~G~~V~~~D~rG----~G~S~~~~~~~~~~~~~~ 201 (258)
|+.-+|.|..... ..|++||+||.+ ++.......-...+++.+..|+.++||= +-.+...... .-..-.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl 186 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYGL 186 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhhh
Confidence 5666788876443 279999999964 2221111223345567799999999993 2222111100 112345
Q ss_pred HHHHHHHHHHHcC---CCCCCCCEEEEEcchHHHHHHHHHHhC--CCcccEEEEECc
Q 025045 202 DNVIEIYTKIKGR---PELQGLPCFILGQSMGGAVTIKAHLKE--PRAWDGVILVAP 253 (258)
Q Consensus 202 ~dl~~~l~~l~~~---~~~~~~~i~l~G~S~Gg~ia~~~a~~~--p~~v~~vvl~~p 253 (258)
.|...+++|++++ .+-|+++|.|.|+|.||..+...+..- ...++++|+.++
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 6888888888754 233788999999999999988777652 346999999887
No 147
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.26 E-value=3e-06 Score=70.73 Aligned_cols=89 Identities=21% Similarity=0.340 Sum_probs=64.5
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
++.++++|=.|++... +..|...+.. .+.+++++++|+|.--+. ....+++.+++.+...+.. . ...++..+
T Consensus 7 ~~~L~cfP~AGGsa~~-fr~W~~~lp~-~iel~avqlPGR~~r~~e-p~~~di~~Lad~la~el~~-~----~~d~P~al 78 (244)
T COG3208 7 RLRLFCFPHAGGSASL-FRSWSRRLPA-DIELLAVQLPGRGDRFGE-PLLTDIESLADELANELLP-P----LLDAPFAL 78 (244)
T ss_pred CceEEEecCCCCCHHH-HHHHHhhCCc-hhheeeecCCCcccccCC-cccccHHHHHHHHHHHhcc-c----cCCCCeee
Confidence 4567777777777665 6778777644 488999999999875443 2235677777777666653 1 12448999
Q ss_pred EEcchHHHHHHHHHHhC
Q 025045 225 LGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~ 241 (258)
+||||||++|..+|.+.
T Consensus 79 fGHSmGa~lAfEvArrl 95 (244)
T COG3208 79 FGHSMGAMLAFEVARRL 95 (244)
T ss_pred cccchhHHHHHHHHHHH
Confidence 99999999999998764
No 148
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.24 E-value=2.3e-05 Score=68.94 Aligned_cols=122 Identities=19% Similarity=0.151 Sum_probs=87.1
Q ss_pred EEEEEEeecCCC-CCcceEEEEEcCCCCCccchHHHH-HHHHHHCCcEEEEECCCCCCCCCCCCC---CCCCH-------
Q 025045 130 EIFCKSWMPKLG-DQIKGVLFFCHGYGDTCTFFFEGI-ARYIAASGYGVYALDHPGFGLSEGLHG---YVPSF------- 197 (258)
Q Consensus 130 ~i~~~~~~p~~~-~~~~p~Vv~lHG~g~~~~~~~~~~-~~~l~~~G~~V~~~D~rG~G~S~~~~~---~~~~~------- 197 (258)
.-++....|... .+.+|++|.+.|-|++.-.....+ ++.|.+.|+..+.+..+-||.-.+..- .....
T Consensus 76 ~a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 76 TARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred heEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 455555667654 233889999999888743222334 888888899999999998886433211 11111
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 198 DALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 198 ~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
...+.++..+++|+..+ ...++.+.|.||||.+|...+...|..+..+-.+++.
T Consensus 156 ~~~i~E~~~Ll~Wl~~~---G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 156 RATILESRALLHWLERE---GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hHHHHHHHHHHHHHHhc---CCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 23467888999999876 3458999999999999999999999877766666554
No 149
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.22 E-value=1.9e-06 Score=79.80 Aligned_cols=142 Identities=17% Similarity=0.133 Sum_probs=107.6
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCC--CCCcceEEEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCCCCCCCCCC
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKL--GDQIKGVLFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHPGFGLSEGL 190 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~--~~~~~p~Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~ 190 (258)
++...++.+....||..|.|.+.. .. .+ +.|++|+--|...-+ ...+....+...++|...+..+.||-|+-...
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHH
Confidence 567788899999999999999886 22 23 378888777754322 11233333666789999999999998865321
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 191 ---HGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 191 ---~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.+....-+...+|..++.+.|.++.-..++++.+.|-|-||.+.....-++|+.+.++|+-.|++||
T Consensus 468 WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDM 537 (648)
T COG1505 468 WHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDM 537 (648)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhh
Confidence 1111234456789999999998875456778999999999999999999999999999999999886
No 150
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.21 E-value=2.7e-06 Score=77.48 Aligned_cols=120 Identities=15% Similarity=0.252 Sum_probs=75.2
Q ss_pred EEEEEeecCCCCCcceEEEEEcCCC---CCccc-hHHHHHHHHHHCC-cEEEEECCCC--CCCCCCC-----CCCCCCHH
Q 025045 131 IFCKSWMPKLGDQIKGVLFFCHGYG---DTCTF-FFEGIARYIAASG-YGVYALDHPG--FGLSEGL-----HGYVPSFD 198 (258)
Q Consensus 131 i~~~~~~p~~~~~~~p~Vv~lHG~g---~~~~~-~~~~~~~~l~~~G-~~V~~~D~rG--~G~S~~~-----~~~~~~~~ 198 (258)
++.-+|.|+......|++||+||.+ +++.. .++ ...|+++| +.|+.++||- .|.-+.. .....+
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n-- 155 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN-- 155 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhcccccccccc--
Confidence 5666788883333379999999964 33322 222 24566776 9999999983 1221111 110011
Q ss_pred HHHHHHHHHHHHHHcC---CCCCCCCEEEEEcchHHHHHHHHHHhCCC---cccEEEEECcCC
Q 025045 199 ALVDNVIEIYTKIKGR---PELQGLPCFILGQSMGGAVTIKAHLKEPR---AWDGVILVAPMC 255 (258)
Q Consensus 199 ~~~~dl~~~l~~l~~~---~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~---~v~~vvl~~p~~ 255 (258)
.-..|+..+++|+.++ .+-|+++|.|.|+|.|++.++.+..- |. .++.+|+.+|.+
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 2356777777777654 33478899999999999998877543 32 466666666654
No 151
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.16 E-value=1.6e-05 Score=66.59 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=74.8
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCC-----cEEEEECCCCC----CCCCCC----------CCCCCCHHHHHHHHHHH
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASG-----YGVYALDHPGF----GLSEGL----------HGYVPSFDALVDNVIEI 207 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G-----~~V~~~D~rG~----G~S~~~----------~~~~~~~~~~~~dl~~~ 207 (258)
+.||+||++++.+. +..++.++...+ --++..|-.|- |.-+.. .....+..++..++..+
T Consensus 47 PTIfIhGsgG~asS-~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 47 PTIFIHGSGGTASS-LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred ceEEEecCCCChhH-HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 47899999999776 677888887664 12455565552 111111 11223466778899999
Q ss_pred HHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC-----cccEEEEECcCCC
Q 025045 208 YTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR-----AWDGVILVAPMCK 256 (258)
Q Consensus 208 l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~-----~v~~vvl~~p~~~ 256 (258)
+.+|..+++++ ++.++||||||.-...|+..+.+ .+..+|.+++.++
T Consensus 126 msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999987655 69999999999999999876522 4777777766554
No 152
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.13 E-value=5.3e-05 Score=69.73 Aligned_cols=112 Identities=21% Similarity=0.312 Sum_probs=71.6
Q ss_pred ceEEEEEcCCCCCccch-HHHHHHHHH-HCCcEEEEECCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHHHcCCC
Q 025045 145 KGVLFFCHGYGDTCTFF-FEGIARYIA-ASGYGVYALDHPGFGLSEGLHG------YVPSFDALVDNVIEIYTKIKGRPE 216 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~-~~~~~~~l~-~~G~~V~~~D~rG~G~S~~~~~------~~~~~~~~~~dl~~~l~~l~~~~~ 216 (258)
.|++|++-|=+.-...+ ...+...++ +.|-.++++.+|-+|+|.+... ..-+.+..++|+..+++++..+..
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 56666665533221111 122333333 4588999999999999975321 123688889999999999985432
Q ss_pred -CCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 217 -LQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 217 -~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
.+..|++++|-|.||++|.++-.++|+.+.|.+.-++++.
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3566999999999999999999999999999998876653
No 153
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.12 E-value=1.2e-05 Score=67.12 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=47.6
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHH--CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAA--SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~--~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
.-.||++||+.++..+ +..+...+.. ..+.-..+.+.+..... ......++...+.+.+-+............+|
T Consensus 4 ~hLvV~vHGL~G~~~d-~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPAD-MRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CEEEEEeCCCCCCHHH-HHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 4479999999988665 4555555544 11211111111111111 11112344444444333333322222223589
Q ss_pred EEEEcchHHHHHHHHHH
Q 025045 223 FILGQSMGGAVTIKAHL 239 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~ 239 (258)
.++||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999876654
No 154
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.12 E-value=1.4e-05 Score=68.87 Aligned_cols=106 Identities=18% Similarity=0.305 Sum_probs=68.9
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCC-------CC-----C---------CC-------C
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGL-------HG-----Y---------VP-------S 196 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~-------~~-----~---------~~-------~ 196 (258)
.|+|||-||.|+++.. +..++-.+++.||.|.+++.|.+-.+... .+ + .. .
T Consensus 118 ~PvvvFSHGLggsRt~-YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTL-YSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred ccEEEEecccccchhh-HHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 7999999999999765 67788999999999999999977433210 00 0 00 0
Q ss_pred HHHHHHHHHHHHHHHH---------------------cCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEEC
Q 025045 197 FDALVDNVIEIYTKIK---------------------GRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVA 252 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~---------------------~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~ 252 (258)
...-++++..++.-+. -+.+++.+++.++|||+||+.++.....+-+ ++..|+..
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD 272 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeee
Confidence 1111233333333221 0113456689999999999999988876654 66555543
No 155
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.10 E-value=1.4e-05 Score=71.43 Aligned_cols=116 Identities=12% Similarity=0.188 Sum_probs=84.6
Q ss_pred EeecCCCCCcceEEEEEcCCCCCccc----hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHH-HHHHHHHH
Q 025045 135 SWMPKLGDQIKGVLFFCHGYGDTCTF----FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALV-DNVIEIYT 209 (258)
Q Consensus 135 ~~~p~~~~~~~p~Vv~lHG~g~~~~~----~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~-~dl~~~l~ 209 (258)
.|.|.....-.+.++++|-+-...-. .-..+..++.++|+.|+.+++++-..+.+. ..+++++ +++.+.++
T Consensus 97 qy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid 172 (445)
T COG3243 97 QYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAID 172 (445)
T ss_pred ccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHH
Confidence 34454444225579999987543211 134688999999999999999977666553 4577776 88888888
Q ss_pred HHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCc-ccEEEEECcCCC
Q 025045 210 KIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRA-WDGVILVAPMCK 256 (258)
Q Consensus 210 ~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~-v~~vvl~~p~~~ 256 (258)
.+.+.. ..++|.++|+|+||.++..++..++.+ |+.+++.....|
T Consensus 173 ~v~~it--g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 173 TVKDIT--GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHh--CccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 887643 346899999999999999998888776 998887765544
No 156
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.98 E-value=4.3e-05 Score=66.62 Aligned_cols=88 Identities=22% Similarity=0.225 Sum_probs=57.5
Q ss_pred HHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCCCC-CCCCEEEEEcchHHHHHHHHHH
Q 025045 164 GIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIK---GRPEL-QGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 164 ~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~---~~~~~-~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+...+.++||.|+++||.|.|. + +. .-......+.+.++... ...++ ...++.++|||.||.-+++.+.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~---~--y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT---P--YL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC---c--cc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 45556668999999999999987 1 11 11222333444444333 32222 3468999999999999987764
Q ss_pred hC----CC-c--ccEEEEECcCCCC
Q 025045 240 KE----PR-A--WDGVILVAPMCKK 257 (258)
Q Consensus 240 ~~----p~-~--v~~vvl~~p~~~l 257 (258)
.. |+ . +.+.++.+|..|+
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred HhHHhCcccccceeEEeccCCccCH
Confidence 32 44 3 7888888888775
No 157
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.98 E-value=2.3e-05 Score=69.68 Aligned_cols=98 Identities=17% Similarity=0.183 Sum_probs=65.7
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcE---EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYG---VYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCF 223 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~---V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~ 223 (258)
.++++||++..... +..+...+...|+. ++.+++.+. .... +.....+.+...++.+.... ..+++.
T Consensus 61 pivlVhG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~------~~~~~~~ql~~~V~~~l~~~--ga~~v~ 130 (336)
T COG1075 61 PIVLVHGLGGGYGN-FLPLDYRLAILGWLTNGVYAFELSGG-DGTY------SLAVRGEQLFAYVDEVLAKT--GAKKVN 130 (336)
T ss_pred eEEEEccCcCCcch-hhhhhhhhcchHHHhccccccccccc-CCCc------cccccHHHHHHHHHHHHhhc--CCCceE
Confidence 59999998655544 55566667667776 888888755 1111 11122233444444444321 245899
Q ss_pred EEEcchHHHHHHHHHHhCC--CcccEEEEECcC
Q 025045 224 ILGQSMGGAVTIKAHLKEP--RAWDGVILVAPM 254 (258)
Q Consensus 224 l~G~S~Gg~ia~~~a~~~p--~~v~~vvl~~p~ 254 (258)
++||||||..+..++...+ .+|+.++.+++.
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 9999999999999988887 789999888764
No 158
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.91 E-value=6.2e-05 Score=61.36 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=69.5
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCC--------CC---------CCCCCCCCCCHHHHHHHHHHH
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGF--------GL---------SEGLHGYVPSFDALVDNVIEI 207 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~--------G~---------S~~~~~~~~~~~~~~~dl~~~ 207 (258)
..+|||+||.|.+...+ ..+.+.+.-.....+.+.-+-. +. +.........+...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 45799999999887763 4444444333344455532211 10 000001122344455566666
Q ss_pred HHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 208 YTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 208 l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
+++.... +++..+|.+-|+||||+++++.+..++..+.+++...++.
T Consensus 82 i~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~ 128 (206)
T KOG2112|consen 82 IDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL 128 (206)
T ss_pred HHHHHHc-CCCccceeEcccCchHHHHHHHHhccccccceeecccccc
Confidence 6665554 5678899999999999999999999988888888776654
No 159
>COG0627 Predicted esterase [General function prediction only]
Probab=97.89 E-value=5.7e-05 Score=66.38 Aligned_cols=110 Identities=22% Similarity=0.258 Sum_probs=72.3
Q ss_pred ceEEEEEcCCCCCccch--HHHHHHHHHHCCcEEEEECCC--------------CCCCCCCC---C---CC-CCCHH-HH
Q 025045 145 KGVLFFCHGYGDTCTFF--FEGIARYIAASGYGVYALDHP--------------GFGLSEGL---H---GY-VPSFD-AL 200 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~--~~~~~~~l~~~G~~V~~~D~r--------------G~G~S~~~---~---~~-~~~~~-~~ 200 (258)
-|+++++||...+...+ ...+.+.....|+.++.+|-. |-+.|--. . .. .+.++ ..
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 68999999987664322 445666777788988887432 22222100 0 00 12333 33
Q ss_pred HHHHHHHHHHHHcCCCCCC--CCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 201 VDNVIEIYTKIKGRPELQG--LPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~~~--~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
++++...++.... .+. .+..++||||||.-|+.+|+++|++++.+...+|+++.
T Consensus 134 ~~ELP~~~~~~f~---~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 134 TQELPALWEAAFP---ADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HhhhhHHHHHhcC---cccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 4555544443332 233 37899999999999999999999999999999998764
No 160
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.88 E-value=3e-05 Score=63.80 Aligned_cols=105 Identities=19% Similarity=0.151 Sum_probs=73.2
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECC-CCCCCCCCCC-C------CCCCHHHHHHHHHHHHHHHHcCCCC
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDH-PGFGLSEGLH-G------YVPSFDALVDNVIEIYTKIKGRPEL 217 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~-rG~G~S~~~~-~------~~~~~~~~~~dl~~~l~~l~~~~~~ 217 (258)
.+||.+--+.+..-......+..++.+||.|+.+|+ +|--.+.... . ...+.+....|+..+++++..+ -
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~--g 117 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH--G 117 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc--C
Confidence 467777765554333356789999999999999995 4422222110 0 0012344567999999999965 2
Q ss_pred CCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECc
Q 025045 218 QGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAP 253 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p 253 (258)
+..+|.++|++|||-++..+....+ .+.++++..|
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hp 152 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHP 152 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEecC
Confidence 4778999999999999998888777 5777777655
No 161
>PRK04940 hypothetical protein; Provisional
Probab=97.86 E-value=0.00016 Score=58.18 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=26.9
Q ss_pred CCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 220 LPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 220 ~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
+++.|+|.|+||..|.+++.++. + ..||+.|.+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~ 93 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLF 93 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCC
Confidence 36999999999999999999885 4 4556666543
No 162
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.85 E-value=8.7e-05 Score=67.38 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHCCcEE-----EE-ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHH
Q 025045 161 FFEGIARYIAASGYGV-----YA-LDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVT 234 (258)
Q Consensus 161 ~~~~~~~~l~~~G~~V-----~~-~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia 234 (258)
++..+.+.|.+.||.. .+ +|+|-- . ...+.+...+...++.+... ..++|+|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~--------~-~~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS--------P-AERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc--------h-hhHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHH
Confidence 4778899998888852 33 688711 1 13446677888888887654 26699999999999999
Q ss_pred HHHHHhCCC------cccEEEEECcCC
Q 025045 235 IKAHLKEPR------AWDGVILVAPMC 255 (258)
Q Consensus 235 ~~~a~~~p~------~v~~vvl~~p~~ 255 (258)
..+....+. .|+++|.+++..
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 999887643 389999988754
No 163
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.85 E-value=0.00018 Score=64.17 Aligned_cols=108 Identities=20% Similarity=0.262 Sum_probs=77.5
Q ss_pred EEEEEcCCCCCccchHH--HH-HHHHHHCCcEEEEECCCCCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHcC
Q 025045 147 VLFFCHGYGDTCTFFFE--GI-ARYIAASGYGVYALDHPGFGLSEGLHGY---------VPSFDALVDNVIEIYTKIKGR 214 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~--~~-~~~l~~~G~~V~~~D~rG~G~S~~~~~~---------~~~~~~~~~dl~~~l~~l~~~ 214 (258)
+|+|.-|.-++-+.+.. .+ .+...+.+.-++-.++|-+|+|.+.... .-+.+....|..+++..++..
T Consensus 82 PIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~ 161 (492)
T KOG2183|consen 82 PIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD 161 (492)
T ss_pred ceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc
Confidence 38888887666544321 12 2233334667899999999998643211 124567788999999999987
Q ss_pred CCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEE-ECcC
Q 025045 215 PELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVIL-VAPM 254 (258)
Q Consensus 215 ~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl-~~p~ 254 (258)
......+|+.+|-|.||++|.++=+++|..+.|.+. -+|+
T Consensus 162 ~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 162 LSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred cccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 666677999999999999999999999998776544 4554
No 164
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.84 E-value=0.00023 Score=57.64 Aligned_cols=83 Identities=29% Similarity=0.400 Sum_probs=57.8
Q ss_pred HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh-
Q 025045 162 FEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK- 240 (258)
Q Consensus 162 ~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~- 240 (258)
+..+...+.. .+.|+.+|.+|++.+.... .+.+..+++....+.... ...+++++|||+||.++..++.+
T Consensus 15 ~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~-----~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 15 YARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA-----GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred HHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc-----CCCCeEEEEECHHHHHHHHHHHHH
Confidence 5567777744 5899999999998665432 355565555444443322 24479999999999999888875
Q ss_pred --CCCcccEEEEECc
Q 025045 241 --EPRAWDGVILVAP 253 (258)
Q Consensus 241 --~p~~v~~vvl~~p 253 (258)
.++.+.+++++.+
T Consensus 86 ~~~~~~~~~l~~~~~ 100 (212)
T smart00824 86 EARGIPPAAVVLLDT 100 (212)
T ss_pred HhCCCCCcEEEEEcc
Confidence 3456888887754
No 165
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.84 E-value=0.00012 Score=60.72 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=49.9
Q ss_pred ceEEEEEcCCCCCccchH---HHHHHHHHHCCcEEEEECCCC-----CCCC-------------CCCCCC---------C
Q 025045 145 KGVLFFCHGYGDTCTFFF---EGIARYIAASGYGVYALDHPG-----FGLS-------------EGLHGY---------V 194 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~---~~~~~~l~~~G~~V~~~D~rG-----~G~S-------------~~~~~~---------~ 194 (258)
++-|+++||++++...+- ..+.+.|.+.++.++-+|-+- -|-. .....+ .
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 567999999999987642 345666655468888877431 1111 000000 1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC--------CCcccEEEEECcCC
Q 025045 195 PSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE--------PRAWDGVILVAPMC 255 (258)
Q Consensus 195 ~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~--------p~~v~~vvl~~p~~ 255 (258)
..+++.++.+.+.++...- =..|+|+|.||.+|..++... ...++-+|+++++.
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-------fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-------FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp ---HHHHHHHHHHHHHH----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred cCHHHHHHHHHHHHHhcCC-------eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 1233334444444433221 257999999999998887531 12478999998864
No 166
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.83 E-value=0.00061 Score=57.89 Aligned_cols=60 Identities=25% Similarity=0.287 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHH-HHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 198 DALVDNVIEIYT-KIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 198 ~~~~~dl~~~l~-~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
+.+.+.+.+.+. ++..+..++.++..++|||+||.+++...+.+|+.+...++++|-+..
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred HHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 344444444443 333445667888999999999999999999999999999999997643
No 167
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.74 E-value=9e-05 Score=61.01 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=78.6
Q ss_pred ceEEEEEcCCCCCc--cchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTC--TFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~--~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
+.-|||+-|.+..- ..+...+...|-+.+|..+-+.++.+-.-.|. .++++-++|+..+++++... + ....|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt----~slk~D~edl~~l~~Hi~~~-~-fSt~v 109 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGT----FSLKDDVEDLKCLLEHIQLC-G-FSTDV 109 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccc----ccccccHHHHHHHHHHhhcc-C-cccce
Confidence 45699999987543 23467788999999999999987643211111 24556678999999988754 2 24489
Q ss_pred EEEEcchHHHHHHHHHHh--CCCcccEEEEECcCCCC
Q 025045 223 FILGQSMGGAVTIKAHLK--EPRAWDGVILVAPMCKK 257 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~--~p~~v~~vvl~~p~~~l 257 (258)
+|+|||-|.+=.++|..+ .+..+.+.|+.+|+.|.
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 999999999988888733 35678999999998763
No 168
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.65 E-value=0.00037 Score=64.70 Aligned_cols=102 Identities=22% Similarity=0.303 Sum_probs=65.5
Q ss_pred ceEEEEEcCCCC---CccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC---CCC
Q 025045 145 KGVLFFCHGYGD---TCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRP---ELQ 218 (258)
Q Consensus 145 ~p~Vv~lHG~g~---~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~---~~~ 218 (258)
+-.|+.+||.|- ++..+-..+..+..+.|+.|+.+|| |-.++.+ +....+++.-++-|+..+. +..
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdY-----SLAPEaP---FPRaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDY-----SLAPEAP---FPRALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeee-----ccCCCCC---CCcHHHHHHHHHHHHhcCHHHhCcc
Confidence 558999999862 2222222233333445999999999 4444333 3455566666667766442 346
Q ss_pred CCCEEEEEcchHHHHHHHHHHh----CCCcccEEEEECcC
Q 025045 219 GLPCFILGQSMGGAVTIKAHLK----EPRAWDGVILVAPM 254 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~~----~p~~v~~vvl~~p~ 254 (258)
+++|+++|.|.||++.+-.+++ .=...+|+++..|.
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 7899999999999987666554 22235788887654
No 169
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.59 E-value=0.0011 Score=60.30 Aligned_cols=138 Identities=15% Similarity=0.187 Sum_probs=86.0
Q ss_pred eeeEEEEeCC--CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHH-------------------HHHHCCcE
Q 025045 117 RTQEWYERNS--KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIAR-------------------YIAASGYG 175 (258)
Q Consensus 117 ~~~~~~~~~~--~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~-------------------~l~~~G~~ 175 (258)
+....++... .+..++|..|........+|+||++.|.+|.++. +..+.+ -+. .-.+
T Consensus 10 ~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an 87 (415)
T PF00450_consen 10 KQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNPYSWN-KFAN 87 (415)
T ss_dssp EEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSE
T ss_pred eEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccccccc-cccc
Confidence 3444444433 5679999988766544448999999999776553 222210 011 1257
Q ss_pred EEEECC-CCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHc-CCCCCCCCEEEEEcchHHHHHHHHHHh----C------
Q 025045 176 VYALDH-PGFGLSEGLHG--YVPSFDALVDNVIEIYTKIKG-RPELQGLPCFILGQSMGGAVTIKAHLK----E------ 241 (258)
Q Consensus 176 V~~~D~-rG~G~S~~~~~--~~~~~~~~~~dl~~~l~~l~~-~~~~~~~~i~l~G~S~Gg~ia~~~a~~----~------ 241 (258)
++-+|. .|.|.|..... ...+.++.++|+..+++.... .++....+++|.|.|+||..+-.+|.. .
T Consensus 88 ~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~ 167 (415)
T PF00450_consen 88 LLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQP 167 (415)
T ss_dssp EEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--ST
T ss_pred eEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccc
Confidence 889994 48898865433 234677888888888876653 344566689999999999987666542 2
Q ss_pred CCcccEEEEECcCCC
Q 025045 242 PRAWDGVILVAPMCK 256 (258)
Q Consensus 242 p~~v~~vvl~~p~~~ 256 (258)
+-.++|+++..|+++
T Consensus 168 ~inLkGi~IGng~~d 182 (415)
T PF00450_consen 168 KINLKGIAIGNGWID 182 (415)
T ss_dssp TSEEEEEEEESE-SB
T ss_pred ccccccceecCcccc
Confidence 234889999998876
No 170
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.59 E-value=0.0047 Score=51.95 Aligned_cols=105 Identities=17% Similarity=0.276 Sum_probs=71.1
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHC-C--cEEEEECCCCCCCCC---C---C--CCCCCCHHHHHHHHHHHHHHHHc
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAAS-G--YGVYALDHPGFGLSE---G---L--HGYVPSFDALVDNVIEIYTKIKG 213 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~-G--~~V~~~D~rG~G~S~---~---~--~~~~~~~~~~~~dl~~~l~~l~~ 213 (258)
++.++++.|.+|.... +..+++.+... + +.|+.+...||-.-+ . . .....+.+++++--.++++.-.-
T Consensus 29 ~~li~~IpGNPG~~gF-Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 29 KPLIVWIPGNPGLLGF-YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred ceEEEEecCCCCchhH-HHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 7899999999998664 67788877664 2 457777777775432 1 1 11223566666666666654332
Q ss_pred CCCCCCCCEEEEEcchHHHHHHHHHHhCCC--cccEEEEECcC
Q 025045 214 RPELQGLPCFILGQSMGGAVTIKAHLKEPR--AWDGVILVAPM 254 (258)
Q Consensus 214 ~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~--~v~~vvl~~p~ 254 (258)
...+++++|||.|+.+.+++...... .+..++++-|-
T Consensus 108 ----k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 108 ----KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred ----CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 25589999999999999999874332 46677776663
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.55 E-value=0.0012 Score=57.49 Aligned_cols=100 Identities=20% Similarity=0.196 Sum_probs=64.9
Q ss_pred EEEEEcCCCCCccc-hHHHHHHHHHH-CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 147 VLFFCHGYGDTCTF-FFEGIARYIAA-SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~-~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
+||+.||+|.++.. -...+.+.+.+ .|..+.++.. |-+ ...++.....++++. +.+.+...+... .-+.+
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~---~~~s~~~~~~~Qve~---vce~l~~~~~l~-~G~na 98 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG---VGDSWLMPLTQQAEI---ACEKVKQMKELS-QGYNI 98 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC---ccccceeCHHHHHHH---HHHHHhhchhhh-CcEEE
Confidence 49999999987653 35567677755 3666666654 322 222333344444444 444444332322 25999
Q ss_pred EEcchHHHHHHHHHHhCCC--cccEEEEECcC
Q 025045 225 LGQSMGGAVTIKAHLKEPR--AWDGVILVAPM 254 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~--~v~~vvl~~p~ 254 (258)
+|+|.||.++-.++.+.++ .|+.+|.+++.
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999876 59999987653
No 172
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.52 E-value=0.0013 Score=55.40 Aligned_cols=102 Identities=21% Similarity=0.255 Sum_probs=65.2
Q ss_pred ceEEEEEcCC--CCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCC--C
Q 025045 145 KGVLFFCHGY--GDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQG--L 220 (258)
Q Consensus 145 ~p~Vv~lHG~--g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~--~ 220 (258)
+.+|-|+-|. |......+..+.+.|+++||.|++.-|.- | .++..--.+..+.....++.+..+.+.+. -
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 6677788884 44445567889999999999999988741 1 11111112233344445555554433332 3
Q ss_pred CEEEEEcchHHHHHHHHHHhCCCcccEEEEEC
Q 025045 221 PCFILGQSMGGAVTIKAHLKEPRAWDGVILVA 252 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~ 252 (258)
+++-+|||+|+-+-+.+...++..-++-|+++
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 78899999999998888776654446666654
No 173
>PLN02606 palmitoyl-protein thioesterase
Probab=97.51 E-value=0.001 Score=57.69 Aligned_cols=100 Identities=18% Similarity=0.221 Sum_probs=62.9
Q ss_pred EEEEEcCCCCCccc-hHHHHHHHHHH-CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 147 VLFFCHGYGDTCTF-FFEGIARYIAA-SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~-~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
+||+.||+|.++.. -+..+.+.+.+ .|+.+..+. .|-+. ..+...... +.+..+.+.+...+... .-+.+
T Consensus 28 PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~---~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 28 PFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLR---QQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHH---HHHHHHHHHHhcchhhc-CceEE
Confidence 49999999955432 36667777753 366544443 23222 112222333 44455555555433332 25999
Q ss_pred EEcchHHHHHHHHHHhCCC--cccEEEEECcC
Q 025045 225 LGQSMGGAVTIKAHLKEPR--AWDGVILVAPM 254 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~--~v~~vvl~~p~ 254 (258)
+|+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999876 59999987653
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.43 E-value=0.00098 Score=63.92 Aligned_cols=89 Identities=17% Similarity=0.131 Sum_probs=53.1
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHH----------------CCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAA----------------SGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYT 209 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~----------------~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~ 209 (258)
-+|+|+.|..|+... .+.++..... ..|+.++.|+-+- -. ..+.....++++-+.+++.
T Consensus 90 IPVLFIPGNAGSyKQ-vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~t--Am~G~~l~dQtEYV~dAIk 164 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQ-VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--FT--AMHGHILLDQTEYVNDAIK 164 (973)
T ss_pred ceEEEecCCCCchHH-HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--hh--hhccHhHHHHHHHHHHHHH
Confidence 369999999887544 3334433321 1345667776421 00 1111245666666666666
Q ss_pred HHHcC----CCCC---CCCEEEEEcchHHHHHHHHHH
Q 025045 210 KIKGR----PELQ---GLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 210 ~l~~~----~~~~---~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
++... .+.+ +..|+++||||||.+|...+-
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 66532 2333 456999999999999987763
No 175
>COG3150 Predicted esterase [General function prediction only]
Probab=97.42 E-value=0.0012 Score=52.06 Aligned_cols=85 Identities=12% Similarity=0.122 Sum_probs=53.2
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEc
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQ 227 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~ 227 (258)
|+++||+-++...+-..+...+-+. |.|-.+.+.... ..+....++.+..++.....+ ...|+|-
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~l--~h~p~~a~~ele~~i~~~~~~------~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPHL--PHDPQQALKELEKAVQELGDE------SPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCCC--CCCHHHHHHHHHHHHHHcCCC------CceEEee
Confidence 8999999887665433222222222 223333333221 235667777777777766533 4899999
Q ss_pred chHHHHHHHHHHhCCCcccEEE
Q 025045 228 SMGGAVTIKAHLKEPRAWDGVI 249 (258)
Q Consensus 228 S~Gg~ia~~~a~~~p~~v~~vv 249 (258)
|+||..|.+++.++. +++++
T Consensus 67 sLGGY~At~l~~~~G--irav~ 86 (191)
T COG3150 67 SLGGYYATWLGFLCG--IRAVV 86 (191)
T ss_pred cchHHHHHHHHHHhC--Chhhh
Confidence 999999999998764 44443
No 176
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.42 E-value=0.0048 Score=55.55 Aligned_cols=125 Identities=18% Similarity=0.267 Sum_probs=80.5
Q ss_pred cEEEEEEeecCCCCCcceEEEEEcCCCCCcc-chHHHHHHHHHHC-CcEEEEECCCCCCCCCCCC---------------
Q 025045 129 LEIFCKSWMPKLGDQIKGVLFFCHGYGDTCT-FFFEGIARYIAAS-GYGVYALDHPGFGLSEGLH--------------- 191 (258)
Q Consensus 129 ~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~-G~~V~~~D~rG~G~S~~~~--------------- 191 (258)
..+.|+......... +..|+++.|+|++.. .+...+.+.+++. +..|+.++|-+.|.-....
T Consensus 20 sKLEyri~ydd~Ke~-kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~ 98 (403)
T PF11144_consen 20 SKLEYRISYDDEKEI-KAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKK 98 (403)
T ss_pred ceeeEEeecCCCCCc-eEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHH
Confidence 467888765554443 778999999998875 3456677777775 4455677787765221100
Q ss_pred ---------CCCCC------------------------------------------HH----HHHHHHHHHHHHHHcCCC
Q 025045 192 ---------GYVPS------------------------------------------FD----ALVDNVIEIYTKIKGRPE 216 (258)
Q Consensus 192 ---------~~~~~------------------------------------------~~----~~~~dl~~~l~~l~~~~~ 216 (258)
....+ ++ -.+-|+..++.++.++..
T Consensus 99 ~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~ 178 (403)
T PF11144_consen 99 SLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFP 178 (403)
T ss_pred HHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 00000 00 123455566666654432
Q ss_pred CC--CCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 217 LQ--GLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 217 ~~--~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
-. +-|++++|+|.||.+|...+.-.|..+++++=.+++
T Consensus 179 ~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 179 KNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 22 349999999999999999999999888888866554
No 177
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.39 E-value=0.00027 Score=60.66 Aligned_cols=103 Identities=20% Similarity=0.262 Sum_probs=51.3
Q ss_pred EEEEEcCCCCCcc--chHHHHHHHHHHC--CcEEEEECCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCC
Q 025045 147 VLFFCHGYGDTCT--FFFEGIARYIAAS--GYGVYALDHPGFGLS-EGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLP 221 (258)
Q Consensus 147 ~Vv~lHG~g~~~~--~~~~~~~~~l~~~--G~~V~~~D~rG~G~S-~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~ 221 (258)
+||+.||+|.++. .-+..+.+.+.+. |--|.+++.- .+.+ +...+. +...-+.+..+.+.+...+.+. .-
T Consensus 7 PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~---f~~v~~Qv~~vc~~l~~~p~L~-~G 81 (279)
T PF02089_consen 7 PVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSF---FGNVNDQVEQVCEQLANDPELA-NG 81 (279)
T ss_dssp -EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHH---HSHHHHHHHHHHHHHHH-GGGT-T-
T ss_pred cEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhH---HHHHHHHHHHHHHHHhhChhhh-cc
Confidence 4999999997652 1255565555443 7677777762 2211 000011 1112223333444444332222 25
Q ss_pred EEEEEcchHHHHHHHHHHhCCC-cccEEEEECcC
Q 025045 222 CFILGQSMGGAVTIKAHLKEPR-AWDGVILVAPM 254 (258)
Q Consensus 222 i~l~G~S~Gg~ia~~~a~~~p~-~v~~vvl~~p~ 254 (258)
+.++|+|.||.+.-.++.+.++ .|+.+|.+++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 9999999999999999999865 58999988653
No 178
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.31 E-value=0.0027 Score=58.19 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=80.3
Q ss_pred ceEEEEEcCCCCCccch----HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCC------CCHHHHHHHHHHHHHHHHcC
Q 025045 145 KGVLFFCHGYGDTCTFF----FEGIARYIAASGYGVYALDHPGFGLSEGLHGYV------PSFDALVDNVIEIYTKIKGR 214 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~----~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~------~~~~~~~~dl~~~l~~l~~~ 214 (258)
.|..+++-|=|.-...| -..+.....+-|..|+..++|-+|.|.+..... -+......|+..+++.+..+
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 45677776643222111 123455555669999999999999886533221 24667789999999999987
Q ss_pred CCCCC-CCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcC
Q 025045 215 PELQG-LPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPM 254 (258)
Q Consensus 215 ~~~~~-~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~ 254 (258)
.+... .+++..|-|+-|.++.++=.++|+.+.|.|.-++.
T Consensus 166 ~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred cCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 76544 49999999999999999999999998887776544
No 179
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.31 E-value=0.0031 Score=53.52 Aligned_cols=99 Identities=26% Similarity=0.345 Sum_probs=64.9
Q ss_pred EEEEEcCCCCCccc-hHHHHHHHHHHC-CcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 147 VLFFCHGYGDTCTF-FFEGIARYIAAS-GYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~-~~~~~~~~l~~~-G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
++|++||+++.+.. -+..+.+.+.+. |..|++.|. |.|- ..+ .+.-..+.+..+.+++...+.. ++-+.+
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s---~l~pl~~Qv~~~ce~v~~m~~l-sqGyni 96 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDS---SLMPLWEQVDVACEKVKQMPEL-SQGYNI 96 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chh---hhccHHHHHHHHHHHHhcchhc-cCceEE
Confidence 49999999987764 255677777664 888999987 4441 111 1222334444555555543222 336899
Q ss_pred EEcchHHHHHHHHHHhCCC-cccEEEEECc
Q 025045 225 LGQSMGGAVTIKAHLKEPR-AWDGVILVAP 253 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~-~v~~vvl~~p 253 (258)
+|+|.||.++-.++..-++ .++..|.+++
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 9999999999999876543 4788777654
No 180
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.07 E-value=0.0071 Score=56.36 Aligned_cols=130 Identities=21% Similarity=0.246 Sum_probs=77.8
Q ss_pred eCCCCc--EEEEEEeecCCCCCcceEEEEEcCCCCCccchHHH-H--HHHHHHCCcEEEEECCCCCCCCCC--CCCCCCC
Q 025045 124 RNSKGL--EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEG-I--ARYIAASGYGVYALDHPGFGLSEG--LHGYVPS 196 (258)
Q Consensus 124 ~~~~g~--~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~-~--~~~l~~~G~~V~~~D~rG~G~S~~--~~~~~~~ 196 (258)
...++. .|.+.+|.|..=+. -++.+-|.|-........ . .......||.++.-|- ||..+.. ....-.+
T Consensus 8 ~~~~~~~~~i~fev~LP~~WNg---R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n 83 (474)
T PF07519_consen 8 HPSDGSAPNIRFEVWLPDNWNG---RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNN 83 (474)
T ss_pred ecCCCCcceEEEEEECChhhcc---CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCC
Confidence 444444 89999999984222 145554433222111111 0 2333478999999997 7765533 1111123
Q ss_pred HHHHHH-------HHHHHHHHHHc-CCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 197 FDALVD-------NVIEIYTKIKG-RPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 197 ~~~~~~-------dl~~~l~~l~~-~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.+.+.+ +...+-+.+.+ -++...+.-+..|.|-||..++..|+++|+.++|||.-+|.++.
T Consensus 84 ~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 84 PEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 322222 22222222221 12335667899999999999999999999999999999998763
No 181
>PLN02209 serine carboxypeptidase
Probab=97.06 E-value=0.0052 Score=56.61 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=79.4
Q ss_pred CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHH---H-------------HHHH------CCcEEEEEC-CCC
Q 025045 127 KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIA---R-------------YIAA------SGYGVYALD-HPG 183 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~---~-------------~l~~------~G~~V~~~D-~rG 183 (258)
.+..++|..+.........|+|+++-|.+|.++.. ..+. . .+.. +-.+++-+| -.|
T Consensus 50 ~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvG 128 (437)
T PLN02209 50 ENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVG 128 (437)
T ss_pred CCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCC
Confidence 35678887776554333479999999987665431 1110 0 0101 114688888 568
Q ss_pred CCCCCCCCC-CCCCHHHHHHHHHHHHHHHH-cCCCCCCCCEEEEEcchHHHHHHHHHHh----C------CCcccEEEEE
Q 025045 184 FGLSEGLHG-YVPSFDALVDNVIEIYTKIK-GRPELQGLPCFILGQSMGGAVTIKAHLK----E------PRAWDGVILV 251 (258)
Q Consensus 184 ~G~S~~~~~-~~~~~~~~~~dl~~~l~~l~-~~~~~~~~~i~l~G~S~Gg~ia~~~a~~----~------p~~v~~vvl~ 251 (258)
.|.|-.... ...+.+..++|+..+++... ..++....+++|.|.|+||..+-.+|.. . +-.++|+++.
T Consensus 129 tGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ig 208 (437)
T PLN02209 129 SGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLG 208 (437)
T ss_pred CCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEec
Confidence 888854322 11233344577777776554 3344556689999999999866655532 1 1147899998
Q ss_pred CcCCC
Q 025045 252 APMCK 256 (258)
Q Consensus 252 ~p~~~ 256 (258)
.|+++
T Consensus 209 ng~td 213 (437)
T PLN02209 209 NPITH 213 (437)
T ss_pred CcccC
Confidence 88776
No 182
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.91 E-value=0.003 Score=49.43 Aligned_cols=54 Identities=20% Similarity=0.256 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC----cccEEEEECc
Q 025045 198 DALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR----AWDGVILVAP 253 (258)
Q Consensus 198 ~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~----~v~~vvl~~p 253 (258)
....+.+...++..... .+..+++++|||+||.+|..++..... ....++..++
T Consensus 8 ~~~~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 8 RSLANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred HHHHHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 34445555555554432 245689999999999999998876543 3445555544
No 183
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.86 E-value=0.0061 Score=52.67 Aligned_cols=121 Identities=16% Similarity=0.105 Sum_probs=67.4
Q ss_pred EEEEEeecCCCCC--cceEEEEEcCC--CCCccchHHHHHHHHHHC----CcEEEEECCCCCCCCCCCCCCCCCHHHHHH
Q 025045 131 IFCKSWMPKLGDQ--IKGVLFFCHGY--GDTCTFFFEGIARYIAAS----GYGVYALDHPGFGLSEGLHGYVPSFDALVD 202 (258)
Q Consensus 131 i~~~~~~p~~~~~--~~p~Vv~lHG~--g~~~~~~~~~~~~~l~~~----G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~ 202 (258)
....+|.|.+-++ +.|++++.||- ..+.. .....+.+... .-.++.+|+-.--. ....+ ...+.+.+
T Consensus 82 ~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~--i~~~~dsli~~g~i~pai~vgid~~d~~~--R~~~~-~~n~~~~~ 156 (299)
T COG2382 82 RRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGR--IPRILDSLIAAGEIPPAILVGIDYIDVKK--RREEL-HCNEAYWR 156 (299)
T ss_pred eeEEEEeCCCCCccccccEEEEeccHHHHhcCC--hHHHHHHHHHcCCCCCceEEecCCCCHHH--HHHHh-cccHHHHH
Confidence 3344455544221 27899999993 22221 11222333333 35677777742100 00000 11112222
Q ss_pred H-HHHHHHHHHcCCCC--CCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCC
Q 025045 203 N-VIEIYTKIKGRPEL--QGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 203 d-l~~~l~~l~~~~~~--~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
. ..+++=++.++..+ +...-+|+|.|+||.++++.+..+|+.+..|+..+|.++
T Consensus 157 ~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 157 FLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 1 22333344443332 444679999999999999999999999999999998765
No 184
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.85 E-value=0.0044 Score=41.10 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=28.0
Q ss_pred CCceeeEEEEeCCCCcEEEEEEeecCC----CCCcceEEEEEcCCCCCccch
Q 025045 114 SGIRTQEWYERNSKGLEIFCKSWMPKL----GDQIKGVLFFCHGYGDTCTFF 161 (258)
Q Consensus 114 ~~~~~~~~~~~~~~g~~i~~~~~~p~~----~~~~~p~Vv~lHG~g~~~~~~ 161 (258)
.|...|+..+.+.||.-+......+.. ..+.+|+|++.||..+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 467789999999999888877665443 333488999999998887664
No 185
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.83 E-value=0.0033 Score=59.11 Aligned_cols=89 Identities=11% Similarity=-0.000 Sum_probs=58.6
Q ss_pred HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 162 FEGIARYIAASGYGVYALDHPGFGLSEGLHGY-VPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 162 ~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~-~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
|..+.+.|++.||. -.|+.|..+....... ....+.+...+...++.+.... ..++++|+||||||.+++.+...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHh
Confidence 57899999999996 3445444433332211 1123566677888888775431 25689999999999999998763
Q ss_pred CC-----------C----cccEEEEECcC
Q 025045 241 EP-----------R----AWDGVILVAPM 254 (258)
Q Consensus 241 ~p-----------~----~v~~vvl~~p~ 254 (258)
.. + -|++.|.++|.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccc
Confidence 21 1 27788887764
No 186
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.81 E-value=0.026 Score=52.03 Aligned_cols=140 Identities=15% Similarity=0.128 Sum_probs=83.5
Q ss_pred eeeEEEEeCC--CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccch--HHHHHH-------------HHHH------CC
Q 025045 117 RTQEWYERNS--KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF--FEGIAR-------------YIAA------SG 173 (258)
Q Consensus 117 ~~~~~~~~~~--~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~--~~~~~~-------------~l~~------~G 173 (258)
.....++.-. .+..++|..+........+|+|+++-|.+|.++.. +..... .+.. +-
T Consensus 36 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 36 ELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred eEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 3444444433 35678888876554433479999999987655421 111111 1100 12
Q ss_pred cEEEEEC-CCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHH-cCCCCCCCCEEEEEcchHHHHHHHHHHh----C-----
Q 025045 174 YGVYALD-HPGFGLSEGLHG-YVPSFDALVDNVIEIYTKIK-GRPELQGLPCFILGQSMGGAVTIKAHLK----E----- 241 (258)
Q Consensus 174 ~~V~~~D-~rG~G~S~~~~~-~~~~~~~~~~dl~~~l~~l~-~~~~~~~~~i~l~G~S~Gg~ia~~~a~~----~----- 241 (258)
.+++-+| ..|.|.|..... ....-...++|+..+++... ..++....+++|.|.|.||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 5688889 568888864332 11222233467777666543 3444566789999999999876666542 1
Q ss_pred -CCcccEEEEECcCCC
Q 025045 242 -PRAWDGVILVAPMCK 256 (258)
Q Consensus 242 -p~~v~~vvl~~p~~~ 256 (258)
+-.++|+++-.|+++
T Consensus 196 ~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 196 PPINLQGYMLGNPVTY 211 (433)
T ss_pred CcccceeeEecCCCcC
Confidence 124789999888765
No 187
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.74 E-value=0.025 Score=52.42 Aligned_cols=101 Identities=13% Similarity=0.159 Sum_probs=67.9
Q ss_pred ceEEEEE----cC--CCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCC
Q 025045 145 KGVLFFC----HG--YGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQ 218 (258)
Q Consensus 145 ~p~Vv~l----HG--~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~ 218 (258)
+|.||+= || +|+.... ..+...+ ..|+.|+.+.+. .+. ....++.+.......+++.+..... +
T Consensus 69 rP~vViDPRAGHGpGIGGFK~d--SevG~AL-~~GHPvYFV~F~----p~P--~pgQTl~DV~~ae~~Fv~~V~~~hp-~ 138 (581)
T PF11339_consen 69 RPFVVIDPRAGHGPGIGGFKPD--SEVGVAL-RAGHPVYFVGFF----PEP--EPGQTLEDVMRAEAAFVEEVAERHP-D 138 (581)
T ss_pred CCeEEeCCCCCCCCCccCCCcc--cHHHHHH-HcCCCeEEEEec----CCC--CCCCcHHHHHHHHHHHHHHHHHhCC-C
Confidence 4555553 33 4444432 2233334 569999888764 111 1223677777777888888876522 2
Q ss_pred CCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCC
Q 025045 219 GLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMC 255 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~ 255 (258)
..+.+|+|.|.||..++.+|..+|+.+.-+|+.+..+
T Consensus 139 ~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 139 APKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 3389999999999999999999999998888875544
No 188
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.73 E-value=0.0052 Score=50.61 Aligned_cols=68 Identities=19% Similarity=0.182 Sum_probs=46.5
Q ss_pred CcEEEEECCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC
Q 025045 173 GYGVYALDHPGFGLSEGL----HGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 173 G~~V~~~D~rG~G~S~~~----~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
-++|+++-||-.....-. .......+....|+.+++++-.++.+ .+++++|+|||.|+.+...+..++
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 368999999854221111 01111244556788888887776643 567999999999999999998764
No 189
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.68 E-value=0.012 Score=48.55 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=59.7
Q ss_pred ceEEEEEcCCCCCccchH---HHHHHHHHHCCcEEEEECCCC------CCCCCC-------C------CCC-------CC
Q 025045 145 KGVLFFCHGYGDTCTFFF---EGIARYIAASGYGVYALDHPG------FGLSEG-------L------HGY-------VP 195 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~---~~~~~~l~~~G~~V~~~D~rG------~G~S~~-------~------~~~-------~~ 195 (258)
++-|+|+||+-.+...+- ..+.+.+.+. +..+-+|-+- .-.+.. + .++ ..
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 456999999987776542 3455666555 6666666551 100000 0 000 00
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh---------CCCcccEEEEECcCCC
Q 025045 196 SFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK---------EPRAWDGVILVAPMCK 256 (258)
Q Consensus 196 ~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~---------~p~~v~~vvl~~p~~~ 256 (258)
.+...-+-+..+.+++.++.-.| .|+|+|.|+.++..++.. +| .++-+|+++++.-
T Consensus 84 ~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKF 148 (230)
T ss_pred cccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCC
Confidence 11111223444445555543222 699999999999988862 12 3688888888753
No 190
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.57 E-value=0.0071 Score=50.27 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCC
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEP 242 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p 242 (258)
+-+.+++++|..++.++.++|.|+|.|.||-+|+.+|..+|
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 45678899999999999999999999999999999999999
No 191
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.57 E-value=0.018 Score=51.71 Aligned_cols=87 Identities=17% Similarity=0.181 Sum_probs=63.5
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
.-.-||+.|=|+-... -...+..|+++|+.|+.+|-.-+-+| +.+.+...+|+..++++-..+ +...++.|
T Consensus 260 d~~av~~SGDGGWr~l-Dk~v~~~l~~~gvpVvGvdsLRYfW~------~rtPe~~a~Dl~r~i~~y~~~--w~~~~~~l 330 (456)
T COG3946 260 DTVAVFYSGDGGWRDL-DKEVAEALQKQGVPVVGVDSLRYFWS------ERTPEQIAADLSRLIRFYARR--WGAKRVLL 330 (456)
T ss_pred ceEEEEEecCCchhhh-hHHHHHHHHHCCCceeeeehhhhhhc------cCCHHHHHHHHHHHHHHHHHh--hCcceEEE
Confidence 4456777776665432 56788999999999999994433233 346778899999999988764 45678999
Q ss_pred EEcchHHHHHHHHHHh
Q 025045 225 LGQSMGGAVTIKAHLK 240 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~ 240 (258)
+|+|+|+=+--....+
T Consensus 331 iGySfGADvlP~~~n~ 346 (456)
T COG3946 331 IGYSFGADVLPFAYNR 346 (456)
T ss_pred EeecccchhhHHHHHh
Confidence 9999999765444333
No 192
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.51 E-value=0.012 Score=55.74 Aligned_cols=106 Identities=15% Similarity=0.110 Sum_probs=59.9
Q ss_pred EEEEEeecCCCCCc-ceEEEEEcCCCC---Cccch-HHHHHHHHHHCCcEEEEECCCC----CCCCCCCCCCCCCHHHHH
Q 025045 131 IFCKSWMPKLGDQI-KGVLFFCHGYGD---TCTFF-FEGIARYIAASGYGVYALDHPG----FGLSEGLHGYVPSFDALV 201 (258)
Q Consensus 131 i~~~~~~p~~~~~~-~p~Vv~lHG~g~---~~~~~-~~~~~~~l~~~G~~V~~~D~rG----~G~S~~~~~~~~~~~~~~ 201 (258)
++.-+|.|...... .|++|++||.+- +...+ .......+......|+.+.||- +... +.......+ -.
T Consensus 97 LylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st-~d~~~~gN~--gl 173 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLST-GDSAAPGNL--GL 173 (545)
T ss_pred ceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeec-CCCCCCCcc--cH
Confidence 44445666544321 689999999752 21111 1112233333457788888882 2111 111111121 12
Q ss_pred HHHHHHHHHHHcC---CCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 202 DNVIEIYTKIKGR---PELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 202 ~dl~~~l~~l~~~---~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.|...+++|+... .+-|+++|.+.|||.||..+..+..
T Consensus 174 ~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 174 FDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 3677777777643 2347889999999999999876654
No 193
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.46 E-value=0.066 Score=49.41 Aligned_cols=143 Identities=15% Similarity=0.212 Sum_probs=86.6
Q ss_pred CceeeEEEEeCC--CCcEEEEEEeecCCCCCcceEEEEEcCCCCCccch--HHHHHHH--------HHH------CCcEE
Q 025045 115 GIRTQEWYERNS--KGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF--FEGIARY--------IAA------SGYGV 176 (258)
Q Consensus 115 ~~~~~~~~~~~~--~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~--~~~~~~~--------l~~------~G~~V 176 (258)
..+.+..|+.-. .+..++|+.+........+|.||++-|.+|-++.. +..+... |.. +-.++
T Consensus 41 ~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNi 120 (454)
T KOG1282|consen 41 PFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANI 120 (454)
T ss_pred CcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccE
Confidence 344555665544 57899999887654433479999999986543321 1111110 000 01246
Q ss_pred EEECCC-CCCCCCC--CCCCCCCHHHHHHHHHHHHH-HHHcCCCCCCCCEEEEEcchHHHHHHHHHH----hCC------
Q 025045 177 YALDHP-GFGLSEG--LHGYVPSFDALVDNVIEIYT-KIKGRPELQGLPCFILGQSMGGAVTIKAHL----KEP------ 242 (258)
Q Consensus 177 ~~~D~r-G~G~S~~--~~~~~~~~~~~~~dl~~~l~-~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~----~~p------ 242 (258)
+-.|.| |-|.|-. ......+-+..++|...++. ++.+.++....+++|.|.|.+|...-++|. ...
T Consensus 121 LfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~ 200 (454)
T KOG1282|consen 121 LFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPN 200 (454)
T ss_pred EEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCc
Confidence 666644 6666532 22233345566777777664 556667778889999999999966655543 221
Q ss_pred CcccEEEEECcCCCC
Q 025045 243 RAWDGVILVAPMCKK 257 (258)
Q Consensus 243 ~~v~~vvl~~p~~~l 257 (258)
-.++|+++-.|+++.
T Consensus 201 iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 201 INLKGYAIGNGLTDP 215 (454)
T ss_pred ccceEEEecCcccCc
Confidence 247899888887763
No 194
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.41 E-value=0.0097 Score=54.32 Aligned_cols=75 Identities=12% Similarity=0.102 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHCCcE------EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHH
Q 025045 161 FFEGIARYIAASGYG------VYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVT 234 (258)
Q Consensus 161 ~~~~~~~~l~~~G~~------V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia 234 (258)
+|..+.+.+..-||. -..+|+|-- -. .....+.+...+...++...+.. +.++|+|++||||+.+.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls---~~---~~e~rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLS---YH---NSEERDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhc---cC---ChhHHHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHH
Confidence 477788888888886 355677621 10 01234566777888888776542 34799999999999999
Q ss_pred HHHHHhCCC
Q 025045 235 IKAHLKEPR 243 (258)
Q Consensus 235 ~~~a~~~p~ 243 (258)
+++...+++
T Consensus 197 lyFl~w~~~ 205 (473)
T KOG2369|consen 197 LYFLKWVEA 205 (473)
T ss_pred HHHHhcccc
Confidence 999988775
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.40 E-value=0.055 Score=44.61 Aligned_cols=102 Identities=21% Similarity=0.310 Sum_probs=60.6
Q ss_pred ceEEEEEcCCCCCcc-chH--------------HHHHHHHHHCCcEEEEECCCC---CCCC-CCCCCCCCCHHHHHHHHH
Q 025045 145 KGVLFFCHGYGDTCT-FFF--------------EGIARYIAASGYGVYALDHPG---FGLS-EGLHGYVPSFDALVDNVI 205 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~-~~~--------------~~~~~~l~~~G~~V~~~D~rG---~G~S-~~~~~~~~~~~~~~~dl~ 205 (258)
...+|++||.|--.. .|- ..+.+...+.||.|+..+--. +-.+ +.+..+.. .-++-+.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyir---t~veh~~ 177 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIR---TPVEHAK 177 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhcc---chHHHHH
Confidence 568999999863321 121 234577778899999887431 1111 11111111 2233333
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC--cccEEEEE
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR--AWDGVILV 251 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~--~v~~vvl~ 251 (258)
-+..++... .....++++.||.||..++.+..++|+ +|-++.+-
T Consensus 178 yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialT 223 (297)
T KOG3967|consen 178 YVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALT 223 (297)
T ss_pred HHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEee
Confidence 344443332 235579999999999999999999875 46666654
No 196
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.38 E-value=0.0061 Score=50.99 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC-----CCcccEEEEECcCC
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE-----PRAWDGVILVAPMC 255 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~-----p~~v~~vvl~~p~~ 255 (258)
+....+++...+..+.++ .+..++++.|||+||++|..++... +..+..+..-+|-+
T Consensus 107 ~~~~~~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 107 YKSLYNQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 444455556665555443 3456899999999999998887642 33466666666644
No 197
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.10 E-value=0.013 Score=44.80 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
+.+.+.++.+.++. ...++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~--~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKY--PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc--cCccchhhccchHHHHHHHHHHh
Confidence 34444455444332 24589999999999999888764
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.99 E-value=0.019 Score=48.11 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC----CCcccEEEE-ECc
Q 025045 203 NVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE----PRAWDGVIL-VAP 253 (258)
Q Consensus 203 dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~----p~~v~~vvl-~~p 253 (258)
.+.+.++.+... ...++.+.|||.||++|...+... .++|..+.. .+|
T Consensus 70 ~A~~yl~~~~~~---~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKK---YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHh---CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 445555555543 233699999999999999998763 346777664 444
No 199
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.97 E-value=0.35 Score=38.95 Aligned_cols=56 Identities=18% Similarity=0.139 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECc
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAP 253 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p 253 (258)
-+.-..++..+++-|.... -+..++.++|||+|+.++-..+.+.+..++.+|+++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GS 142 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECC
Confidence 3455778888888887653 3456899999999999999888775667888888743
No 200
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.81 E-value=0.03 Score=50.50 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=79.5
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHcCCCCCCCCE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGY--VPSFDALVDNVIEIYTKIKGRPELQGLPC 222 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~~~~i 222 (258)
+|+|++.-|++-..........+.+ +-+-+.+.+|-+|.|...... .-++...+.|...+++.++. +-..+.
T Consensus 63 rPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~---iY~~kW 136 (448)
T PF05576_consen 63 RPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP---IYPGKW 136 (448)
T ss_pred CCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh---hccCCc
Confidence 7899999999765433233344444 356899999999999764322 23677888999999999875 346689
Q ss_pred EEEEcchHHHHHHHHHHhCCCcccEEEEE-CcC
Q 025045 223 FILGQSMGGAVTIKAHLKEPRAWDGVILV-APM 254 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~-~p~ 254 (258)
+-.|-|-||+.++.+=.-+|+.+++.|.. +|.
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 99999999999998877789999998884 553
No 201
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.80 E-value=0.086 Score=48.57 Aligned_cols=123 Identities=19% Similarity=0.129 Sum_probs=75.7
Q ss_pred EEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEE-CCCCCCCCCCCCCCCCCHHHH
Q 025045 122 YERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYAL-DHPGFGLSEGLHGYVPSFDAL 200 (258)
Q Consensus 122 ~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~-D~rG~G~S~~~~~~~~~~~~~ 200 (258)
...++.+.++.|+. .|.+-+ -|..|+.-|+-.... ++.+ -++.+.|+..+.+ |.|--|.+ -+..+ +++
T Consensus 269 r~~D~~reEi~yYF-nPGD~K--PPL~VYFSGyR~aEG--FEgy-~MMk~Lg~PfLL~~DpRleGGa----FYlGs-~ey 337 (511)
T TIGR03712 269 RLVDSKRQEFIYYF-NPGDFK--PPLNVYFSGYRPAEG--FEGY-FMMKRLGAPFLLIGDPRLEGGA----FYLGS-DEY 337 (511)
T ss_pred eEecCCCCeeEEec-CCcCCC--CCeEEeeccCcccCc--chhH-HHHHhcCCCeEEeeccccccce----eeeCc-HHH
Confidence 33456677777753 444333 478999999855322 2221 2334557776555 66655433 11111 222
Q ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 201 VDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
-+.+.++++......+.+.+.++|-|-|||..-|++++.+.. ..++|+--|.+++
T Consensus 338 E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NL 392 (511)
T TIGR03712 338 EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccch
Confidence 334444444444444567778999999999999999998763 5888888888775
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.79 E-value=0.021 Score=46.11 Aligned_cols=75 Identities=20% Similarity=0.168 Sum_probs=45.8
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh--C----CCcccE
Q 025045 174 YGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK--E----PRAWDG 247 (258)
Q Consensus 174 ~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~--~----p~~v~~ 247 (258)
..+..++|+-..... .+..+...-++++...++....+ -+..+++|.|+|.|+.++..++.. . .++|.+
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~a 114 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAA 114 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEE
Confidence 456667776432111 12224455566777777665543 245689999999999999999877 2 246888
Q ss_pred EEEECc
Q 025045 248 VILVAP 253 (258)
Q Consensus 248 vvl~~p 253 (258)
+++++-
T Consensus 115 vvlfGd 120 (179)
T PF01083_consen 115 VVLFGD 120 (179)
T ss_dssp EEEES-
T ss_pred EEEecC
Confidence 888753
No 203
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.52 E-value=0.12 Score=43.54 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=61.6
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEc
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQ 227 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~ 227 (258)
+|++=||.+........+.+...+.|+.++.+-.+........ ......++. +++.+......+..++++..+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~---l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADK---LLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHH---HHHHhhhhccCCCCCEEEEEE
Confidence 6777899877666677888888889999999876532211111 122233333 333333321112238999999
Q ss_pred chHHHHHHHHHHh---------CC-CcccEEEEECcC
Q 025045 228 SMGGAVTIKAHLK---------EP-RAWDGVILVAPM 254 (258)
Q Consensus 228 S~Gg~ia~~~a~~---------~p-~~v~~vvl~~p~ 254 (258)
|.||...+..... .. .+++++|+.+..
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P 111 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCP 111 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCC
Confidence 9988877665431 11 138999998765
No 204
>PLN02454 triacylglycerol lipase
Probab=95.12 E-value=0.073 Score=48.41 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 199 ALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 199 ~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
...+++...++.+.+...-...+|++.|||+||++|+..|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 455667777777765432122249999999999999988753
No 205
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.97 E-value=0.07 Score=49.32 Aligned_cols=111 Identities=16% Similarity=0.131 Sum_probs=66.4
Q ss_pred cceEEEEEcCCCCCccchHHHHHH---HHHHC---------------CcEEEEEC-CCCCCCCCC-CCCCCCCHHHHHHH
Q 025045 144 IKGVLFFCHGYGDTCTFFFEGIAR---YIAAS---------------GYGVYALD-HPGFGLSEG-LHGYVPSFDALVDN 203 (258)
Q Consensus 144 ~~p~Vv~lHG~g~~~~~~~~~~~~---~l~~~---------------G~~V~~~D-~rG~G~S~~-~~~~~~~~~~~~~d 203 (258)
.+|+++++-|.+|.++.+ ..+.+ .=-.. --.++-+| --|.|.|.. ......++...-+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 389999999987765542 22210 00001 12577788 668888874 22233455566666
Q ss_pred HHHHHHHHHcCC---CCCCCCEEEEEcchHHHHHHHHHHhCCC---cccEEEEECcCC
Q 025045 204 VIEIYTKIKGRP---ELQGLPCFILGQSMGGAVTIKAHLKEPR---AWDGVILVAPMC 255 (258)
Q Consensus 204 l~~~l~~l~~~~---~~~~~~i~l~G~S~Gg~ia~~~a~~~p~---~v~~vvl~~p~~ 255 (258)
+..+.+...... .-..++.+|+|.|+||.-+-.+|..--+ ..++++++.++.
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 666665543210 1123489999999999998888754332 356777766653
No 206
>PLN02408 phospholipase A1
Probab=94.22 E-value=0.09 Score=47.13 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 201 VDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
.+++.+.++.+.+...-...+|++.|||+||++|...|..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445555555544322123369999999999999888754
No 207
>PLN02571 triacylglycerol lipase
Probab=94.21 E-value=0.093 Score=47.73 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
+++...++.+.....-...+|++.|||+||++|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 444444444443321123369999999999999988754
No 208
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.17 E-value=0.15 Score=48.09 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=65.7
Q ss_pred ceEEEEEcCCC--CCccchHHHHHHHHHHCCcE--EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--HHHcCCCCC
Q 025045 145 KGVLFFCHGYG--DTCTFFFEGIARYIAASGYG--VYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYT--KIKGRPELQ 218 (258)
Q Consensus 145 ~p~Vv~lHG~g--~~~~~~~~~~~~~l~~~G~~--V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~--~l~~~~~~~ 218 (258)
.|.++++||.+ ....+++..|...+.-.|-. |..+|++.- ..+ ..+....+....+.+ .+....++.
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~--igG-----~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP--IGG-----ANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC--CCC-----cchHHHHHHHHHHhhhhhhhhhccCC
Confidence 57899999987 23344455676777666643 456666522 111 245566666666666 334455567
Q ss_pred CCCEEEEEcchHHHHHHHHHHhCC-CcccEEEEEC
Q 025045 219 GLPCFILGQSMGGAVTIKAHLKEP-RAWDGVILVA 252 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~~~p-~~v~~vvl~~ 252 (258)
..+|+|+|+|||+.++.+.....- ..|+++|.++
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 789999999999888888776443 3478877764
No 209
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.10 E-value=1.1 Score=39.39 Aligned_cols=127 Identities=19% Similarity=0.332 Sum_probs=82.7
Q ss_pred CCcEEEEEEeecCCCC-CcceEEEEEcCCCCCccchHHHH--------------HHHHHHCCcEEEEECCC-CCCCC--C
Q 025045 127 KGLEIFCKSWMPKLGD-QIKGVLFFCHGYGDTCTFFFEGI--------------ARYIAASGYGVYALDHP-GFGLS--E 188 (258)
Q Consensus 127 ~g~~i~~~~~~p~~~~-~~~p~Vv~lHG~g~~~~~~~~~~--------------~~~l~~~G~~V~~~D~r-G~G~S--~ 188 (258)
++..+++.+|...... ..+|..+++.|..+.++.-+..| ..++.+ ..++-+|-| |.|.| +
T Consensus 12 ~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVd 89 (414)
T KOG1283|consen 12 TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVD 89 (414)
T ss_pred cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeec
Confidence 4566777777543222 23789999999765443212111 123333 346666644 77766 4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH-cCCCCCCCCEEEEEcchHHHHHHHHHHhC------C---CcccEEEEECcCC
Q 025045 189 GLHGYVPSFDALVDNVIEIYTKIK-GRPELQGLPCFILGQSMGGAVTIKAHLKE------P---RAWDGVILVAPMC 255 (258)
Q Consensus 189 ~~~~~~~~~~~~~~dl~~~l~~l~-~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~------p---~~v~~vvl~~p~~ 255 (258)
+...+..+....+.|+.++++.+. .++++...+.+|+-.|.||-+|..+++.. . ..+.+++|-.+.+
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 555566677888899999998775 45567788999999999999999887642 1 2356777755554
No 210
>PLN02324 triacylglycerol lipase
Probab=93.40 E-value=0.15 Score=46.43 Aligned_cols=40 Identities=10% Similarity=0.152 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
..+.+...+..+.....-...+|.+.|||+||++|+..|.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3344555555554432212236999999999999998875
No 211
>PLN02162 triacylglycerol lipase
Probab=93.04 E-value=0.34 Score=44.69 Aligned_cols=22 Identities=27% Similarity=0.465 Sum_probs=18.6
Q ss_pred CCCCEEEEEcchHHHHHHHHHH
Q 025045 218 QGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
+..++++.|||+||++|..++.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 3558999999999999988754
No 212
>PLN02802 triacylglycerol lipase
Probab=92.83 E-value=0.19 Score=46.76 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 202 DNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 202 ~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
+++.+-++.+.....-...+|++.|||+||++|+..|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344444454443322122379999999999999988754
No 213
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.69 E-value=0.34 Score=38.71 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
.++-=.+.-+++.+. .+. ....+-|-||||..|..+..++|+.+.++|.++++.|.
T Consensus 83 r~~rH~AyerYv~eE-alp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 83 RAERHRAYERYVIEE-ALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHHHHHHHh-hcC-CCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 333334444454432 122 35788999999999999999999999999999988764
No 214
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=92.67 E-value=0.24 Score=41.12 Aligned_cols=75 Identities=20% Similarity=0.341 Sum_probs=45.8
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEE-EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGV-YALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V-~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
..|||.-|||.+... +..+ ....++.| +.+|||..- ++. | +. .-+.|.|
T Consensus 12 ~LilfF~GWg~d~~~-f~hL---~~~~~~D~l~~yDYr~l~-----------~d~---~-------~~-----~y~~i~l 61 (213)
T PF04301_consen 12 ELILFFAGWGMDPSP-FSHL---ILPENYDVLICYDYRDLD-----------FDF---D-------LS-----GYREIYL 61 (213)
T ss_pred eEEEEEecCCCChHH-hhhc---cCCCCccEEEEecCcccc-----------ccc---c-------cc-----cCceEEE
Confidence 489999999998654 2222 11234554 778997331 110 1 11 1237999
Q ss_pred EEcchHHHHHHHHHHhCCCcccEEEEEC
Q 025045 225 LGQSMGGAVTIKAHLKEPRAWDGVILVA 252 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~p~~v~~vvl~~ 252 (258)
+++|||=.+|..+....| ++..|.+.
T Consensus 62 vAWSmGVw~A~~~l~~~~--~~~aiAIN 87 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP--FKRAIAIN 87 (213)
T ss_pred EEEeHHHHHHHHHhccCC--cceeEEEE
Confidence 999999999988765443 45444443
No 215
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.37 E-value=0.78 Score=40.50 Aligned_cols=83 Identities=22% Similarity=0.279 Sum_probs=55.7
Q ss_pred cEEEEECCC-CCCCCCCCCC-CCCCHHHHHHHHHHHHHHHH-cCCCCCCCCEEEEEcchHHHHHHHHHHh----C-----
Q 025045 174 YGVYALDHP-GFGLSEGLHG-YVPSFDALVDNVIEIYTKIK-GRPELQGLPCFILGQSMGGAVTIKAHLK----E----- 241 (258)
Q Consensus 174 ~~V~~~D~r-G~G~S~~~~~-~~~~~~~~~~dl~~~l~~l~-~~~~~~~~~i~l~G~S~Gg~ia~~~a~~----~----- 241 (258)
.+++-+|.| |.|.|-.... ...+-+..++|+..+++... ..+++...+.+|.|.|.||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368889977 8888865422 21222344478877776554 4455677899999999999877666542 1
Q ss_pred -CCcccEEEEECcCCC
Q 025045 242 -PRAWDGVILVAPMCK 256 (258)
Q Consensus 242 -p~~v~~vvl~~p~~~ 256 (258)
+-.++|+++-.|+++
T Consensus 82 ~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 82 PPINLQGYMLGNPVTY 97 (319)
T ss_pred CceeeeEEEeCCCCCC
Confidence 114789988888765
No 216
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.32 E-value=0.46 Score=42.40 Aligned_cols=39 Identities=21% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCCCEEEEEcchHHHHHHHHHHhCCC-----cccEEEEECcCCC
Q 025045 218 QGLPCFILGQSMGGAVTIKAHLKEPR-----AWDGVILVAPMCK 256 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~~~p~-----~v~~vvl~~p~~~ 256 (258)
...+|.|+|||+|+.+...+.....+ .|+.+++++..+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 56689999999999999887665433 3788898876654
No 217
>PLN02310 triacylglycerol lipase
Probab=92.32 E-value=0.26 Score=44.74 Aligned_cols=21 Identities=24% Similarity=0.507 Sum_probs=18.2
Q ss_pred CCEEEEEcchHHHHHHHHHHh
Q 025045 220 LPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 220 ~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
.+|.+.|||+||++|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999888753
No 218
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=92.12 E-value=0.38 Score=35.72 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=20.7
Q ss_pred EEeCCCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccc
Q 025045 122 YERNSKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTF 160 (258)
Q Consensus 122 ~~~~~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~ 160 (258)
+..+.+|..|++....+...+ ..++|++|||+++--.
T Consensus 71 f~t~I~g~~iHFih~rs~~~~--aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPN--AIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT---EEEEEE--SS--GGG
T ss_pred eeEEEeeEEEEEEEeeCCCCC--CeEEEEECCCCccHHh
Confidence 334557889999887654332 5689999999987544
No 219
>PLN02761 lipase class 3 family protein
Probab=91.97 E-value=0.29 Score=45.73 Aligned_cols=39 Identities=13% Similarity=0.242 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCC----CCCCCCEEEEEcchHHHHHHHHHH
Q 025045 201 VDNVIEIYTKIKGRP----ELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~----~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+++...++.+.... .-...+|.+.|||+||++|+..|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345555555555432 112347999999999999998774
No 220
>PLN00413 triacylglycerol lipase
Probab=91.96 E-value=0.27 Score=45.47 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=19.1
Q ss_pred CCCCEEEEEcchHHHHHHHHHH
Q 025045 218 QGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
+..++++.|||+||++|..++.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 4558999999999999998874
No 221
>PLN02753 triacylglycerol lipase
Probab=91.91 E-value=0.29 Score=45.80 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCCC---CCCCEEEEEcchHHHHHHHHHH
Q 025045 201 VDNVIEIYTKIKGRPEL---QGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~---~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+++...++.+.....- ...+|.+.|||+||++|+..|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 44555555555543221 2358999999999999998874
No 222
>PLN02934 triacylglycerol lipase
Probab=91.70 E-value=0.3 Score=45.48 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 203 NVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 203 dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+...++.+.++ .+..++++.|||+||++|..++.
T Consensus 306 ~v~~~lk~ll~~--~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKE--HKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHH--CCCCeEEEeccccHHHHHHHHHH
Confidence 344445544433 24558999999999999998864
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.65 E-value=0.33 Score=45.36 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.1
Q ss_pred CCEEEEEcchHHHHHHHHHHh
Q 025045 220 LPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 220 ~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
.+|.+.|||+||++|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 469999999999999888743
No 224
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=90.90 E-value=1.1 Score=45.99 Aligned_cols=93 Identities=22% Similarity=0.278 Sum_probs=55.3
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
.|+++|+|.+-+.... ++.++..+ ..+.+|..-....+..+++..+......++.+. +..+..+
T Consensus 2123 ~~~~Ffv~pIEG~tt~-l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ-----P~GPYrl 2186 (2376)
T KOG1202|consen 2123 EPPLFFVHPIEGFTTA-LESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ-----PEGPYRL 2186 (2376)
T ss_pred CCceEEEeccccchHH-HHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC-----CCCCeee
Confidence 5789999998665443 44444433 122233222223333466665555444444443 3558999
Q ss_pred EEcchHHHHHHHHHHhC--CCcccEEEEECc
Q 025045 225 LGQSMGGAVTIKAHLKE--PRAWDGVILVAP 253 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~~--p~~v~~vvl~~p 253 (258)
+|+|+|+.++..+|... .+....+|++.+
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 99999999999998643 233455777654
No 225
>PLN02719 triacylglycerol lipase
Probab=90.83 E-value=0.45 Score=44.39 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCCC---CCCCEEEEEcchHHHHHHHHHH
Q 025045 201 VDNVIEIYTKIKGRPEL---QGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~---~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+++...++.+.....- ...+|.+.|||+||++|+..|.
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 44555556655543211 1347999999999999998874
No 226
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.92 E-value=1.8 Score=36.35 Aligned_cols=64 Identities=27% Similarity=0.281 Sum_probs=37.3
Q ss_pred CcEEEEECCCCC-CCC--CCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHh
Q 025045 173 GYGVYALDHPGF-GLS--EGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 173 G~~V~~~D~rG~-G~S--~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
|+.+..++|+.. +-- .+......+...-++.+.++++.... ..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 567778888752 100 01111112344444455555544322 45689999999999999887654
No 227
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=89.35 E-value=0.75 Score=39.77 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=25.7
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC
Q 025045 203 NVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 203 dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
+..+++..+.+. +...+|.+.|||+||++|..+..++
T Consensus 261 a~ldI~~~v~~~--Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 261 AALDILGAVRRI--YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHh--CCCceEEEeccccchHHHHHhcccc
Confidence 344444444432 3456899999999999999887665
No 228
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.35 E-value=0.75 Score=39.77 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=25.7
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC
Q 025045 203 NVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 203 dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
+..+++..+.+. +...+|.+.|||+||++|..+..++
T Consensus 261 a~ldI~~~v~~~--Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 261 AALDILGAVRRI--YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHh--CCCceEEEeccccchHHHHHhcccc
Confidence 344444444432 3456899999999999999887665
No 229
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.10 E-value=0.58 Score=41.69 Aligned_cols=21 Identities=33% Similarity=0.597 Sum_probs=18.4
Q ss_pred CCCEEEEEcchHHHHHHHHHH
Q 025045 219 GLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.-.|.+.|||+||++|...|.
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred CcEEEEecCChHHHHHHHHHH
Confidence 447999999999999988875
No 230
>PLN02847 triacylglycerol lipase
Probab=87.66 E-value=1.1 Score=42.59 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=19.0
Q ss_pred CCCCEEEEEcchHHHHHHHHHHh
Q 025045 218 QGLPCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~~ 240 (258)
+.-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 34589999999999999887653
No 231
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=87.55 E-value=5.5 Score=34.77 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=73.2
Q ss_pred eecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 025045 136 WMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRP 215 (258)
Q Consensus 136 ~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 215 (258)
..+....+ .|.|+++--..++.......-.+.+... ..|+..||-..-.-.-..+ ..+++++++.+.+++..++..
T Consensus 95 ~~~~~r~p-dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G-~FdldDYIdyvie~~~~~Gp~- 170 (415)
T COG4553 95 DMPDARKP-DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAG-HFDLDDYIDYVIEMINFLGPD- 170 (415)
T ss_pred ccccccCC-CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccC-CccHHHHHHHHHHHHHHhCCC-
Confidence 34444444 7789999988887666566555555433 5789999864432222122 247889999999999988753
Q ss_pred CCCCCCEEEEEcchH-----HHHHHHHHHhCCCcccEEEEECcCCCC
Q 025045 216 ELQGLPCFILGQSMG-----GAVTIKAHLKEPRAWDGVILVAPMCKK 257 (258)
Q Consensus 216 ~~~~~~i~l~G~S~G-----g~ia~~~a~~~p~~v~~vvl~~p~~~l 257 (258)
+++++-+.= ++++++.+...|......+++++.+|-
T Consensus 171 ------~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 171 ------AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred ------CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 555555543 445555555667778889999887763
No 232
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=86.58 E-value=7.9 Score=28.05 Aligned_cols=84 Identities=12% Similarity=0.106 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHH--HHHHHH
Q 025045 161 FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGA--VTIKAH 238 (258)
Q Consensus 161 ~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~--ia~~~a 238 (258)
.+..+.+.+...||-.-.+.++..|.+..........+.=...+..+++. .+..+++++|.|--.= +-..++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~------fP~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRD------FPERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHH------CCCCcEEEEeeCCCcCHHHHHHHH
Confidence 35667777877888766666666544422111111111112233333332 3566899999995543 334567
Q ss_pred HhCCCcccEEEE
Q 025045 239 LKEPRAWDGVIL 250 (258)
Q Consensus 239 ~~~p~~v~~vvl 250 (258)
.++|++|.++.+
T Consensus 86 ~~~P~~i~ai~I 97 (100)
T PF09949_consen 86 RRFPGRILAIYI 97 (100)
T ss_pred HHCCCCEEEEEE
Confidence 889999998764
No 233
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=85.49 E-value=10 Score=33.61 Aligned_cols=94 Identities=19% Similarity=0.083 Sum_probs=59.7
Q ss_pred ceEEEEEcCC----CCCccchHHHHHHHHHH-CCcEEEEECCCCCCCCCCCC------------CCCCCHHHHHHHHHHH
Q 025045 145 KGVLFFCHGY----GDTCTFFFEGIARYIAA-SGYGVYALDHPGFGLSEGLH------------GYVPSFDALVDNVIEI 207 (258)
Q Consensus 145 ~p~Vv~lHG~----g~~~~~~~~~~~~~l~~-~G~~V~~~D~rG~G~S~~~~------------~~~~~~~~~~~dl~~~ 207 (258)
+..|+++-|- |.......-.+...+.. .+-.++++=.+|-|.-.-.. .....-..+.+.+..+
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 6678888883 33332224456666655 56777777767776431110 0000112456788888
Q ss_pred HHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 208 YTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 208 l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
+..+...++ .+++|+++|+|-|+.++-.+|.
T Consensus 111 YrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 111 YRFLIFNYE-PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHhcC-CCCeEEEeeccchhHHHHHHHH
Confidence 888887755 5678999999999999876654
No 234
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=85.42 E-value=1.6 Score=40.53 Aligned_cols=101 Identities=17% Similarity=0.184 Sum_probs=53.4
Q ss_pred EEEEEeecCCCCCcceEEEEEcCCC---CCccchHHHHHHHHHHCC-cEEEEECCC----CC---CCCCCCCCCCCCHHH
Q 025045 131 IFCKSWMPKLGDQIKGVLFFCHGYG---DTCTFFFEGIARYIAASG-YGVYALDHP----GF---GLSEGLHGYVPSFDA 199 (258)
Q Consensus 131 i~~~~~~p~~~~~~~p~Vv~lHG~g---~~~~~~~~~~~~~l~~~G-~~V~~~D~r----G~---G~S~~~~~~~~~~~~ 199 (258)
++.-+|.|........++|++-|.| ++.+. .-.=.+.|+..+ --|+.++|| |+ +..+...+ .. .
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SL-dvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPG---Nm-G 195 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSL-DVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPG---NM-G 195 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcce-eeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCC---cc-c
Confidence 5666788842222245788898865 33221 111235555544 446778887 21 11111111 11 1
Q ss_pred HHHHHHHHHHHHHcCC---CCCCCCEEEEEcchHHHHHHHH
Q 025045 200 LVDNVIEIYTKIKGRP---ELQGLPCFILGQSMGGAVTIKA 237 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~---~~~~~~i~l~G~S~Gg~ia~~~ 237 (258)
.-|-..+++|+.++. +-+.++|.|+|.|.|++-...-
T Consensus 196 -l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aH 235 (601)
T KOG4389|consen 196 -LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAH 235 (601)
T ss_pred -hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhhe
Confidence 123344455555432 2367799999999999866543
No 235
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=83.99 E-value=2.8 Score=35.26 Aligned_cols=52 Identities=27% Similarity=0.445 Sum_probs=36.6
Q ss_pred cEEEEEEeecCCCC--CcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECC
Q 025045 129 LEIFCKSWMPKLGD--QIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 129 ~~i~~~~~~p~~~~--~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~ 181 (258)
..+...++.|...+ .+.|.+++.||+++...... ..+..++..++.++..+.
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~-~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSL-GYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcc-hHHHHhhhceeEEeeecc
Confidence 45666666666543 23789999999988766522 367777788888777765
No 236
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.44 E-value=3.6 Score=39.17 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 200 LVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 200 ~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
...-...+++.+.+..--+..+|+.+||||||.++=.+..
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 3444456666665542224778999999999998876654
No 237
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=80.21 E-value=1.9 Score=39.09 Aligned_cols=19 Identities=32% Similarity=0.352 Sum_probs=15.7
Q ss_pred CCEEEEEcchHHHHHHHHH
Q 025045 220 LPCFILGQSMGGAVTIKAH 238 (258)
Q Consensus 220 ~~i~l~G~S~Gg~ia~~~a 238 (258)
++|-++|||+||.++..+.
T Consensus 150 ~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ceeeeeeeecCCeeeeEEE
Confidence 3799999999999876553
No 238
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=80.12 E-value=18 Score=29.30 Aligned_cols=45 Identities=27% Similarity=0.478 Sum_probs=33.3
Q ss_pred ceEEEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEECCC--CCCCCCC
Q 025045 145 KGVLFFCHGYGDTCT-FFFEGIARYIAASGYGVYALDHP--GFGLSEG 189 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D~r--G~G~S~~ 189 (258)
++.+||+-|..+++. ..-..+.+.|.+.|++++..|-- -||.+..
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d 69 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD 69 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC
Confidence 578999999876653 33456788999999999999843 2555543
No 239
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=76.15 E-value=26 Score=26.60 Aligned_cols=65 Identities=17% Similarity=0.106 Sum_probs=36.1
Q ss_pred CcceEEEEEcCCCCCccchH-HHHHHHHHHCCcE---EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Q 025045 143 QIKGVLFFCHGYGDTCTFFF-EGIARYIAASGYG---VYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKG 213 (258)
Q Consensus 143 ~~~p~Vv~lHG~g~~~~~~~-~~~~~~l~~~G~~---V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~ 213 (258)
+.+|.|+-+||+.|++..+. ..+++.+-..|.. |..+.-.-| .......+.+-+++...+.....
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~h------FP~~~~v~~Yk~~L~~~I~~~v~ 118 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHH------FPHNSNVDEYKEQLKSWIRGNVS 118 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeeccccc------CCCchHHHHHHHHHHHHHHHHHH
Confidence 44889999999998886653 3456665555532 222221100 11112455666677766665544
No 240
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.57 E-value=5.6 Score=34.25 Aligned_cols=114 Identities=11% Similarity=0.042 Sum_probs=58.2
Q ss_pred EEEEEEeecCCCCCcceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH---
Q 025045 130 EIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIE--- 206 (258)
Q Consensus 130 ~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~--- 206 (258)
+-++..+.|..- .+..+++-|-|++.-.---.+.+-+...+...+.+.-+-+|.-.......... +++.|+..
T Consensus 101 ~A~~~~liPQK~---~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~L-e~vtDlf~mG~ 176 (371)
T KOG1551|consen 101 TARVAWLIPQKM---ADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHML-EYVTDLFKMGR 176 (371)
T ss_pred ceeeeeecccCc---CCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHH-HHHHHHHHhhH
Confidence 344555556322 33455555555443211112445555667777778877777654321110011 12222221
Q ss_pred -HHHHHHcCC----CCCCCCEEEEEcchHHHHHHHHHHhCCCcccE
Q 025045 207 -IYTKIKGRP----ELQGLPCFILGQSMGGAVTIKAHLKEPRAWDG 247 (258)
Q Consensus 207 -~l~~l~~~~----~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~ 247 (258)
.++...... ...-.+..++|-||||.+|......++..|..
T Consensus 177 A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~ 222 (371)
T KOG1551|consen 177 ATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVAT 222 (371)
T ss_pred HHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccc
Confidence 111111111 12344799999999999999998877655443
No 241
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=73.17 E-value=32 Score=29.63 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 201 VDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
.+.+..++.++.... .+..+|.++|+|-|+..|-.++.
T Consensus 74 ~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 74 EARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHH
Confidence 445666666665554 35668999999999999988874
No 242
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=71.21 E-value=0.055 Score=45.94 Aligned_cols=91 Identities=19% Similarity=0.056 Sum_probs=52.4
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC-CCCCCCEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRP-ELQGLPCF 223 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~-~~~~~~i~ 223 (258)
...++..||...+...............++.++..|+++++.+.+..... .+..+...+..++.... ..+..++.
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA----GLSLGGPSAGALLAWGPTRLDASRIV 163 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEE----EEEeeccchHHHhhcchhHHHhhccc
Confidence 34688899975554432333334555567889999999999886542110 11111111122221111 11244799
Q ss_pred EEEcchHHHHHHHHHH
Q 025045 224 ILGQSMGGAVTIKAHL 239 (258)
Q Consensus 224 l~G~S~Gg~ia~~~a~ 239 (258)
++|.|+||..++....
T Consensus 164 ~~g~s~g~~~~~~~~~ 179 (299)
T COG1073 164 VWGESLGGALALLLLG 179 (299)
T ss_pred ceeeccCceeeccccc
Confidence 9999999999887654
No 243
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=68.61 E-value=75 Score=29.12 Aligned_cols=96 Identities=18% Similarity=0.121 Sum_probs=57.9
Q ss_pred EEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC---------C-------------CCHHHHHHHHHHH
Q 025045 150 FCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGY---------V-------------PSFDALVDNVIEI 207 (258)
Q Consensus 150 ~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~---------~-------------~~~~~~~~dl~~~ 207 (258)
++=|-..+...-+..+.+.+.+.|..|+.+|.--.+......+- . ...+.+.+-+..+
T Consensus 5 ~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~ 84 (403)
T PF06792_consen 5 AIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARF 84 (403)
T ss_pred EEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHH
Confidence 33454455443356677888889999999997444433221000 0 0122334445555
Q ss_pred HHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccE
Q 025045 208 YTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDG 247 (258)
Q Consensus 208 l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~ 247 (258)
+..+..+..++. |+-+|-|.|..++.......|--+-.
T Consensus 85 v~~l~~~g~i~G--vi~~GGs~GT~lat~aMr~LPiG~PK 122 (403)
T PF06792_consen 85 VSDLYDEGKIDG--VIGIGGSGGTALATAAMRALPIGFPK 122 (403)
T ss_pred HHHHHhcCCccE--EEEecCCccHHHHHHHHHhCCCCCCe
Confidence 555555434443 88999999999999998877754333
No 244
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.98 E-value=27 Score=31.30 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=55.2
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILG 226 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G 226 (258)
.||.+=||.+..+.+...+.+...+.||.++.+-.+-+-..........+..... ..+..+....+.+..++++.-
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~----~~l~~L~~~~~~~~~pi~fh~ 115 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLAS----TRLSELLSDYNSDPCPIIFHV 115 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHH----HHHHHHhhhccCCcCceEEEE
Confidence 4666777776666567788888889999999888775533322221112222222 233333333345777999999
Q ss_pred cchHHHHHHHHH
Q 025045 227 QSMGGAVTIKAH 238 (258)
Q Consensus 227 ~S~Gg~ia~~~a 238 (258)
+|+||...+...
T Consensus 116 FS~ng~~~~~si 127 (350)
T KOG2521|consen 116 FSGNGVRLMYSI 127 (350)
T ss_pred ecCCceeehHHH
Confidence 999998765443
No 245
>PRK02399 hypothetical protein; Provisional
Probab=67.71 E-value=98 Score=28.39 Aligned_cols=97 Identities=21% Similarity=0.186 Sum_probs=56.7
Q ss_pred EEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC---------CCCC-------------HHHHHHHHHH
Q 025045 149 FFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG---------YVPS-------------FDALVDNVIE 206 (258)
Q Consensus 149 v~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~---------~~~~-------------~~~~~~dl~~ 206 (258)
|++=|-..+...-+..+...+.+.|..|+.+|.-..|......+ ...+ .+.+.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 45556555554435666777878899999999843332110000 0001 1223334444
Q ss_pred HHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccE
Q 025045 207 IYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDG 247 (258)
Q Consensus 207 ~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~ 247 (258)
++..+.++.+++. |+-+|-|+|..++.......|--+-.
T Consensus 86 ~v~~L~~~g~i~g--viglGGs~GT~lat~aMr~LPiG~PK 124 (406)
T PRK02399 86 FVRELYERGDVAG--VIGLGGSGGTALATPAMRALPIGVPK 124 (406)
T ss_pred HHHHHHhcCCccE--EEEecCcchHHHHHHHHHhCCCCCCe
Confidence 5544444434443 88999999999999998877754433
No 246
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.21 E-value=9.4 Score=30.35 Aligned_cols=66 Identities=17% Similarity=0.258 Sum_probs=41.1
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcE-EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEE
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYG-VYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFIL 225 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~-V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~ 225 (258)
.||+.-|||..++. .. +......+. ++.+||+.... ++ |..+ .+ .|.++
T Consensus 13 LIvyFaGwgtpps~-v~---HLilpeN~dl~lcYDY~dl~l---------df-----DfsA-y~-----------hirlv 62 (214)
T COG2830 13 LIVYFAGWGTPPSA-VN---HLILPENHDLLLCYDYQDLNL---------DF-----DFSA-YR-----------HIRLV 62 (214)
T ss_pred EEEEEecCCCCHHH-Hh---hccCCCCCcEEEEeehhhcCc---------cc-----chhh-hh-----------hhhhh
Confidence 78999999887654 22 222334454 58889864321 11 1111 11 47889
Q ss_pred EcchHHHHHHHHHHhCC
Q 025045 226 GQSMGGAVTIKAHLKEP 242 (258)
Q Consensus 226 G~S~Gg~ia~~~a~~~p 242 (258)
.+|||=.+|-++....+
T Consensus 63 AwSMGVwvAeR~lqg~~ 79 (214)
T COG2830 63 AWSMGVWVAERVLQGIR 79 (214)
T ss_pred hhhHHHHHHHHHHhhcc
Confidence 99999999988877654
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.12 E-value=18 Score=34.10 Aligned_cols=40 Identities=23% Similarity=0.300 Sum_probs=29.1
Q ss_pred CCCCEEEEEcchHHHHHHHHHHhC-----CCcccEEEEECcCCCC
Q 025045 218 QGLPCFILGQSMGGAVTIKAHLKE-----PRAWDGVILVAPMCKK 257 (258)
Q Consensus 218 ~~~~i~l~G~S~Gg~ia~~~a~~~-----p~~v~~vvl~~p~~~l 257 (258)
..+||.|+|+|+|+-+-....... -+.|..+++.+....+
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 677899999999999988665422 2247888887655443
No 248
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=62.67 E-value=25 Score=27.72 Aligned_cols=48 Identities=17% Similarity=0.091 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEE
Q 025045 199 ALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVIL 250 (258)
Q Consensus 199 ~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl 250 (258)
...+++.++++.+... ..+|+++|-|..|.+-+.++...++.++.++=
T Consensus 52 ~~~~~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 52 QSKAELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EEE
T ss_pred HHHHHHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEEe
Confidence 3444555666655553 55899999999999999988765555665553
No 249
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=61.62 E-value=86 Score=28.00 Aligned_cols=88 Identities=18% Similarity=0.127 Sum_probs=54.6
Q ss_pred CCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHH
Q 025045 154 YGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAV 233 (258)
Q Consensus 154 ~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~i 233 (258)
.|++...-...-.+....+||.|+..|--|.= .+-..+++.+..+.+-+.......+..+.++-.+.-|+=
T Consensus 202 ~G~DpAaVafDAi~~Akar~~DvvliDTAGRL---------hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqn 272 (340)
T COG0552 202 EGADPAAVAFDAIQAAKARGIDVVLIDTAGRL---------HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQN 272 (340)
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEeCcccc---------cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChh
Confidence 44444332222335555678888888865442 233455666766666555432223445888889999999
Q ss_pred HHHHHHhCCC--cccEEEE
Q 025045 234 TIKAHLKEPR--AWDGVIL 250 (258)
Q Consensus 234 a~~~a~~~p~--~v~~vvl 250 (258)
++.-|..+.+ .+.|+|+
T Consensus 273 al~QAk~F~eav~l~GiIl 291 (340)
T COG0552 273 ALSQAKIFNEAVGLDGIIL 291 (340)
T ss_pred HHHHHHHHHHhcCCceEEE
Confidence 9988887654 3677776
No 250
>PF03283 PAE: Pectinacetylesterase
Probab=60.59 E-value=10 Score=34.11 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHH
Q 025045 201 VDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHL 239 (258)
Q Consensus 201 ~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~ 239 (258)
...+.++++++..+.--+.++|+|.|.|.||.-++..+-
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 346778888887662224678999999999999887653
No 251
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=59.67 E-value=26 Score=24.09 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC-CCCEEEEEcchHHHHHHHHHHhC
Q 025045 197 FDALVDNVIEIYTKIKGRPELQ-GLPCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~-~~~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
.....+.+.+.++++..+..+. ++++.++|-|-|=.+|.+.+..+
T Consensus 16 P~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 16 PVGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3466778888888888765543 46899999999999998777654
No 252
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=59.45 E-value=18 Score=30.00 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=29.7
Q ss_pred ceEEEEEcCCCCCccc--hHHHHHHHHHHCCcEEEEECC
Q 025045 145 KGVLFFCHGYGDTCTF--FFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~--~~~~~~~~l~~~G~~V~~~D~ 181 (258)
.+.|.|+.=.+.+.+. |.+...+.|++.|+.+...+.
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 4579999887766554 677888999999999988886
No 253
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=56.62 E-value=78 Score=28.33 Aligned_cols=37 Identities=27% Similarity=0.308 Sum_probs=27.6
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCC
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLS 187 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S 187 (258)
|+|+|...-. . +..+++.|+++|+.|..+-..+.+..
T Consensus 2 il~~~~~~p~--~-~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPG--Q-FRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCch--h-HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 7899985421 2 67799999999999988876665543
No 254
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=54.20 E-value=1.5e+02 Score=25.81 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=48.2
Q ss_pred EcCCCCCccchHHHHHHHHHHCCcEEEEE------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 151 CHGYGDTCTFFFEGIARYIAASGYGVYAL------DHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 151 lHG~g~~~~~~~~~~~~~l~~~G~~V~~~------D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
+||.-++... .-.++..|++|.++ +..|+|...+... ..++..|+..-++..... ..-..++
T Consensus 11 v~G~vGn~AA-----~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~----~~e~l~~~l~~l~~~~~~---~~~davl 78 (281)
T COG2240 11 VYGSVGNSAA-----IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVM----PPEQLADLLNGLEAIDKL---GECDAVL 78 (281)
T ss_pred eecccccHhH-----HHHHHHcCCceeeeceEEecCCCCCCCCCCcCC----CHHHHHHHHHHHHhcccc---cccCEEE
Confidence 5666555432 23345568876554 6788888665432 234344444444432222 2335688
Q ss_pred EEcchHH----HHHHHHHHhCCCcccEEEEECcCCC
Q 025045 225 LGQSMGG----AVTIKAHLKEPRAWDGVILVAPMCK 256 (258)
Q Consensus 225 ~G~S~Gg----~ia~~~a~~~p~~v~~vvl~~p~~~ 256 (258)
.|+=-.. .++-.+..-..+..++++++.|+..
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMG 114 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMG 114 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCccc
Confidence 8873222 2222222222223568888888753
No 255
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=53.32 E-value=1.3e+02 Score=26.42 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=26.5
Q ss_pred ceEEEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECC
Q 025045 145 KGVLFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~ 181 (258)
+|+++++-|+.|++ ..|.+.+..++.+.+..-+.+++
T Consensus 18 ~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 18 RPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred CCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 67888888986655 55778888888887665555443
No 256
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=51.78 E-value=4.4 Score=30.34 Aligned_cols=16 Identities=31% Similarity=0.434 Sum_probs=12.9
Q ss_pred CCcccccccccccccc
Q 025045 16 FPFHNSLKNQLPVLGL 31 (258)
Q Consensus 16 ~~~~~~~~~~~~~~~~ 31 (258)
-|-|-|+|||||+|..
T Consensus 83 s~~pRTFiNQLPDWSM 98 (129)
T PF12590_consen 83 SPAPRTFINQLPDWSM 98 (129)
T ss_pred CCCchhHhhhCccHHH
Confidence 4557889999999974
No 257
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=51.09 E-value=26 Score=27.53 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=27.0
Q ss_pred ceEEEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEEC
Q 025045 145 KGVLFFCHGYGDTCT-FFFEGIARYIAASGYGVYALD 180 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D 180 (258)
++.|||+-|..+++. ..-..+.+.|.+.|+.|+.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 367999999877663 334567888889999999998
No 258
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.09 E-value=51 Score=30.96 Aligned_cols=87 Identities=20% Similarity=0.341 Sum_probs=48.9
Q ss_pred EEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcc
Q 025045 149 FFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQS 228 (258)
Q Consensus 149 v~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S 228 (258)
+|--|||.+...-...-.++..++||.|+.+|-.|.-... +.+...+..+++.. .++.|..+|.-
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~------~pd~i~~vgea 506 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVN------KPDLILFVGEA 506 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC---------hhHHHHHHHHHhcC------CCceEEEehhh
Confidence 3445777664432333445566689999999987653221 12223333333221 24468888887
Q ss_pred hHHHHHHHHHHh---------CCCcccEEEE
Q 025045 229 MGGAVTIKAHLK---------EPRAWDGVIL 250 (258)
Q Consensus 229 ~Gg~ia~~~a~~---------~p~~v~~vvl 250 (258)
+=|.=++.-+.+ .|..++++++
T Consensus 507 lvg~dsv~q~~~fn~al~~~~~~r~id~~~l 537 (587)
T KOG0781|consen 507 LVGNDSVDQLKKFNRALADHSTPRLIDGILL 537 (587)
T ss_pred hhCcHHHHHHHHHHHHHhcCCCccccceEEE
Confidence 777766544432 2445777776
No 259
>PRK12467 peptide synthase; Provisional
Probab=44.86 E-value=1e+02 Score=36.92 Aligned_cols=86 Identities=20% Similarity=0.105 Sum_probs=54.7
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
.+.++..|...++.-. +..+...+. .+..++.+..++.-.. +. ...+++.......+.+.+... ..+..+
T Consensus 3692 ~~~l~~~h~~~r~~~~-~~~l~~~l~-~~~~~~~l~~~~~~~d-~~--~~~~~~~~~~~y~~~~~~~~~-----~~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFD-YEPLAVILE-GDRHVLGLTCRHLLDD-GW--QDTSLQAMAVQYADYILWQQA-----KGPYGL 3761 (3956)
T ss_pred ccceeeechhhcchhh-hHHHHHHhC-CCCcEEEEeccccccc-cC--CccchHHHHHHHHHHHHHhcc-----CCCeee
Confidence 3569999998776443 445555553 3567888877654221 11 123555555555555655442 336899
Q ss_pred EEcchHHHHHHHHHHh
Q 025045 225 LGQSMGGAVTIKAHLK 240 (258)
Q Consensus 225 ~G~S~Gg~ia~~~a~~ 240 (258)
.|+|+||.++..++.+
T Consensus 3762 ~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3762 LGWSLGGTLARLVAEL 3777 (3956)
T ss_pred eeeecchHHHHHHHHH
Confidence 9999999999888754
No 260
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=44.46 E-value=49 Score=25.30 Aligned_cols=14 Identities=14% Similarity=0.368 Sum_probs=10.4
Q ss_pred HHHHHHCCcEEEEE
Q 025045 166 ARYIAASGYGVYAL 179 (258)
Q Consensus 166 ~~~l~~~G~~V~~~ 179 (258)
...|.+.|+.|+.+
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 46677889998654
No 261
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=44.10 E-value=1.2e+02 Score=25.47 Aligned_cols=40 Identities=13% Similarity=0.359 Sum_probs=28.8
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCc-EEEEECCCCC
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGY-GVYALDHPGF 184 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~-~V~~~D~rG~ 184 (258)
.-+|+++||...+....+.-+...+.+.|| +|+.....|+
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 568999999877665555556677888899 6766665443
No 262
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=43.99 E-value=1.7e+02 Score=24.59 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=27.1
Q ss_pred ceEEEEEcCCC--CCccchHHHHHHHHHHCCcEEEEECCC
Q 025045 145 KGVLFFCHGYG--DTCTFFFEGIARYIAASGYGVYALDHP 182 (258)
Q Consensus 145 ~p~Vv~lHG~g--~~~~~~~~~~~~~l~~~G~~V~~~D~r 182 (258)
.+.|+|+.=.+ .....|...+.+.+.+.|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 34588888665 333445667778888899999888765
No 263
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=40.01 E-value=2.2e+02 Score=26.54 Aligned_cols=72 Identities=24% Similarity=0.233 Sum_probs=50.6
Q ss_pred HHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC
Q 025045 164 GIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR 243 (258)
Q Consensus 164 ~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~ 243 (258)
.-.+.+...+|.|+.+|-.|.- .--+.+.+++.++-+.+. +..+.++-.+|=|+-|...|..+.+
T Consensus 173 ~al~~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~~------P~E~llVvDam~GQdA~~~A~aF~e 237 (451)
T COG0541 173 AALEKAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVIN------PDETLLVVDAMIGQDAVNTAKAFNE 237 (451)
T ss_pred HHHHHHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhcC------CCeEEEEEecccchHHHHHHHHHhh
Confidence 3345666778999999976542 123355556555544433 5579999999999999999988765
Q ss_pred c--ccEEEE
Q 025045 244 A--WDGVIL 250 (258)
Q Consensus 244 ~--v~~vvl 250 (258)
. +.++|+
T Consensus 238 ~l~itGvIl 246 (451)
T COG0541 238 ALGITGVIL 246 (451)
T ss_pred hcCCceEEE
Confidence 4 667776
No 264
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.61 E-value=2.8e+02 Score=24.22 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=26.8
Q ss_pred CCCEEEEEcchHHHHHHHHH---HhCCCcccEEEEECcCC
Q 025045 219 GLPCFILGQSMGGAVTIKAH---LKEPRAWDGVILVAPMC 255 (258)
Q Consensus 219 ~~~i~l~G~S~Gg~ia~~~a---~~~p~~v~~vvl~~p~~ 255 (258)
.-+++|.|.|+|+.-+.... ...-+++++++..+|..
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 34699999999988765543 22345699999988754
No 265
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=36.91 E-value=2.5e+02 Score=23.83 Aligned_cols=38 Identities=13% Similarity=0.053 Sum_probs=25.6
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcE-EEEECCC
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYG-VYALDHP 182 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~-V~~~D~r 182 (258)
.+-|+++.-.++....+...+.+.+.+.|+. |-..+.+
T Consensus 28 ~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 28 DAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 4468888765555444566778888888984 6566664
No 266
>PF07897 DUF1675: Protein of unknown function (DUF1675); InterPro: IPR012463 The members of this family are sequences derived from hypothetical plant proteins of unknown function. One member of this family (Q9SFV5 from SWISSPROT) is annotated as a putative RNA-binding protein, but no evidence was found to support this.
Probab=35.36 E-value=69 Score=27.88 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=26.2
Q ss_pred CCCcEEEEEEeecCCCCCcceEEEEEcCCCCCccch
Q 025045 126 SKGLEIFCKSWMPKLGDQIKGVLFFCHGYGDTCTFF 161 (258)
Q Consensus 126 ~~g~~i~~~~~~p~~~~~~~p~Vv~lHG~g~~~~~~ 161 (258)
++|.+|...+|.-..+.. -.+|+.|||...+...|
T Consensus 233 png~~i~g~ly~y~~~~~-v~i~c~chg~~~~~~ef 267 (284)
T PF07897_consen 233 PNGKRIEGFLYKYGKGEE-VRIVCVCHGSFLSPAEF 267 (284)
T ss_pred CCCceeeEEEEEecCCCe-EEEEEEecCCCCCHHHH
Confidence 568899999997754444 67899999987775543
No 267
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=33.01 E-value=2.1e+02 Score=23.59 Aligned_cols=36 Identities=11% Similarity=-0.095 Sum_probs=21.8
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcE-EEEECCC
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYG-VYALDHP 182 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~-V~~~D~r 182 (258)
.|+++.=.+.....+.+.+.+.+.+.|+. +..++..
T Consensus 31 ~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 31 RIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred cEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 46666544443344466677888888874 5556554
No 268
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.77 E-value=68 Score=26.80 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=23.5
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhC
Q 025045 206 EIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 206 ~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
-+++.+.++ ++..+.-.+.|-|+|+.++..++...
T Consensus 16 GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 16 GVLSLLIEA-GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 344455443 23333458999999999999998754
No 269
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=32.44 E-value=96 Score=26.45 Aligned_cols=40 Identities=23% Similarity=0.158 Sum_probs=29.3
Q ss_pred EEEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCCCCCCC
Q 025045 147 VLFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHPGFGLS 187 (258)
Q Consensus 147 ~Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~rG~G~S 187 (258)
++.++ |-||.+ +.....++..|++.|++|+.+|.--.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 46666 766655 33456789999999999999997655543
No 270
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=32.40 E-value=3.6e+02 Score=23.91 Aligned_cols=95 Identities=18% Similarity=0.097 Sum_probs=59.6
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-------------------CCCCHHHHHHHHHHHH
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPGFGLSEGLHG-------------------YVPSFDALVDNVIEIY 208 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~-------------------~~~~~~~~~~dl~~~l 208 (258)
.|++-|-+.+...-+..+++.+.+.|..++.+|.---+.-.-..+ ....-.....-..++.
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~~ 83 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAFV 83 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHHH
Confidence 567777777766556678888888999999999743211100000 0001112233344677
Q ss_pred HHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCCc
Q 025045 209 TKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPRA 244 (258)
Q Consensus 209 ~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~ 244 (258)
+++..+.+++. ++-.|-|.|..+.+-.+...|--
T Consensus 84 r~l~sR~dV~g--mig~GGsgGT~lit~~m~~LPlg 117 (401)
T COG5441 84 RFLSSRGDVAG--MIGMGGSGGTALITPAMRRLPLG 117 (401)
T ss_pred HHhhcccchhh--eeecCCCcchHhhhhHHHhcCcC
Confidence 77777766554 77788889988888888777643
No 271
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=31.79 E-value=60 Score=26.92 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=25.2
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEEC
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALD 180 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D 180 (258)
..||++|.........+..+.+.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 35999997533222347788899999999987764
No 272
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=31.55 E-value=68 Score=25.17 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=23.3
Q ss_pred EEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCC
Q 025045 149 FFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHP 182 (258)
Q Consensus 149 v~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~r 182 (258)
.+..+-||.+ +..-..++..+++.|+.|+.+|.-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 3445545544 333557899999999999999984
No 273
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=31.52 E-value=3e+02 Score=25.12 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=48.2
Q ss_pred ceEEEEEcCCCCCcc------chHHHHHHHHHHCCcEEEEEC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCC
Q 025045 145 KGVLFFCHGYGDTCT------FFFEGIARYIAASGYGVYALD--HPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPE 216 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~------~~~~~~~~~l~~~G~~V~~~D--~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~ 216 (258)
...||++||...+.. ..|..+.+.+.+.|+ +-.+| |.|+|. | ++ +|...+-..+...
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~--G-------le---eDa~~lR~~a~~~-- 235 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFAD--G-------LE---EDAYALRLFAEVG-- 235 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhcc--c-------hH---HHHHHHHHHHHhC--
Confidence 457999999865432 237778888888876 44555 555542 1 22 2333322222221
Q ss_pred CCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEECc
Q 025045 217 LQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILVAP 253 (258)
Q Consensus 217 ~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~~p 253 (258)
+-.++..|..-++++ |.+++.++.+++.
T Consensus 236 ----~~~lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 236 ----PELLVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred ----CcEEEEehhhhhhhh-----hhhccceeEEEeC
Confidence 227777776655543 4556777766654
No 274
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=31.46 E-value=2.8e+02 Score=22.61 Aligned_cols=38 Identities=11% Similarity=0.022 Sum_probs=27.4
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHC-CcEEEEECCC
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAAS-GYGVYALDHP 182 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~-G~~V~~~D~r 182 (258)
.+.|+|+.=.......+...+.+.+.+. |+.+..++..
T Consensus 31 ~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~ 69 (212)
T cd03146 31 RPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLF 69 (212)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEecc
Confidence 3458888766655445566778888888 9998888754
No 275
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=30.71 E-value=75 Score=28.10 Aligned_cols=31 Identities=26% Similarity=0.334 Sum_probs=21.5
Q ss_pred CcceEEEEEcCCCCCccchH-HHHHHHHHHCC
Q 025045 143 QIKGVLFFCHGYGDTCTFFF-EGIARYIAASG 173 (258)
Q Consensus 143 ~~~p~Vv~lHG~g~~~~~~~-~~~~~~l~~~G 173 (258)
+.+|.|+=+|||.|++..|. +.+++.+...|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 44889999999998876653 34555554444
No 276
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=30.57 E-value=1e+02 Score=20.62 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=20.1
Q ss_pred eEEEEEcCCCCCccchHHHHHH-HHHHCCcEEEEE--CCCCCC
Q 025045 146 GVLFFCHGYGDTCTFFFEGIAR-YIAASGYGVYAL--DHPGFG 185 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~-~l~~~G~~V~~~--D~rG~G 185 (258)
|.++++||...... +.++. +..++|..++.+ |+.-||
T Consensus 32 ~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~~adW~~hG 71 (71)
T PF10686_consen 32 PDMVLVHGGAPKGA---DRIAARWARERGVPVIRFPADWQRHG 71 (71)
T ss_pred CCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEeCcChhhCC
Confidence 45889999762222 23433 334568766544 554443
No 277
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=29.86 E-value=3.3e+02 Score=22.68 Aligned_cols=86 Identities=20% Similarity=0.218 Sum_probs=43.5
Q ss_pred ceEEEEEcCCCCCccc---hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHH-------------------
Q 025045 145 KGVLFFCHGYGDTCTF---FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVD------------------- 202 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~---~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~------------------- 202 (258)
.+-|+.+-|.....+. ....+.+.+.+.|+.|-.+|++..-.-.......+....+.+
T Consensus 26 ~~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~~lPl~~~d~~~~p~v~~l~~~v~~ADgvii~TPEYn~si 105 (219)
T TIGR02690 26 IPRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPPGLPLPDAAHADHPKVRELRQLSEWSEGQVWCSPERHGAI 105 (219)
T ss_pred CCEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCcccCCCCCcCcccCHHHHHHHHHHHhCCEEEEeCCccccCc
Confidence 3457777775322221 233344555556899988886532111100001111111111
Q ss_pred --HHHHHHHHHHcCC----CCCCCCEEEEEcchH
Q 025045 203 --NVIEIYTKIKGRP----ELQGLPCFILGQSMG 230 (258)
Q Consensus 203 --dl~~~l~~l~~~~----~~~~~~i~l~G~S~G 230 (258)
-++.++||+.... .+..+++.++|.|.|
T Consensus 106 pg~LKNaiDwls~~~~~~~~~~~KpvaivgaSgg 139 (219)
T TIGR02690 106 TGSQKDQIDWIPLSVGPVRPTQGKTLAVMQVSGG 139 (219)
T ss_pred CHHHHHHHHhcccCcccccccCCCcEEEEEeCCc
Confidence 3456778876531 246778999999933
No 278
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=29.10 E-value=2e+02 Score=22.14 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=29.3
Q ss_pred ceEEEEEcCCCCCc---cchHHHHHHHHHHCCc---EEEEECCCC
Q 025045 145 KGVLFFCHGYGDTC---TFFFEGIARYIAASGY---GVYALDHPG 183 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~---~~~~~~~~~~l~~~G~---~V~~~D~rG 183 (258)
.-+||+.|++.+.. ...+..+...|...|| ++++++..+
T Consensus 17 ~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 17 NVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 66899999986543 2236778889988997 688888765
No 279
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=28.81 E-value=4.3e+02 Score=23.76 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=23.2
Q ss_pred eEEEEEcCCCCCccchHHHHHHHHHHC--CcEEEEECCCC
Q 025045 146 GVLFFCHGYGDTCTFFFEGIARYIAAS--GYGVYALDHPG 183 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~~~~~~~~~l~~~--G~~V~~~D~rG 183 (258)
.+=+|+||.|.... .....+++.+. +..|+..|-.+
T Consensus 212 ~vDi~V~gaGTGGT--itgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 212 KVDIFVAGAGTGGT--ITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred CCCEEEeccCCCce--eechhHHHHHhCCCCEEEEeCCCc
Confidence 34678888765433 34566677664 57788888654
No 280
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=28.75 E-value=1.1e+02 Score=23.47 Aligned_cols=22 Identities=23% Similarity=0.305 Sum_probs=16.1
Q ss_pred HHHHHHHHHHCCcEEEEECCCC
Q 025045 162 FEGIARYIAASGYGVYALDHPG 183 (258)
Q Consensus 162 ~~~~~~~l~~~G~~V~~~D~rG 183 (258)
...+.+.+.+.|+.|-.+|...
T Consensus 2 ~~~~~~~f~~~g~~v~~l~~~~ 23 (154)
T PF03575_consen 2 VEKFRKAFRKLGFEVDQLDLSD 23 (154)
T ss_dssp HHHHHHHHHHCT-EEEECCCTS
T ss_pred HHHHHHHHHHCCCEEEEEeccC
Confidence 4567788888899988888753
No 281
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=28.63 E-value=81 Score=24.73 Aligned_cols=21 Identities=24% Similarity=0.140 Sum_probs=18.0
Q ss_pred CEEEEEcchHHHHHHHHHHhC
Q 025045 221 PCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
.-.+.|-|+|+.++..++...
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 468999999999999988753
No 282
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=27.92 E-value=73 Score=27.88 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=42.4
Q ss_pred ceEEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECCCC--------CCCCC---CCC---CCCCCHHHHHHHHHHHHHH
Q 025045 145 KGVLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDHPG--------FGLSE---GLH---GYVPSFDALVDNVIEIYTK 210 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~rG--------~G~S~---~~~---~~~~~~~~~~~dl~~~l~~ 210 (258)
-|.|+|..|.++ ..+.+++.||.|+..||-= .|..- |.. ....+.+...+.+.+.++.
T Consensus 252 vPmi~fakG~g~--------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGG--------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcch--------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHH
Confidence 589999999654 2356678999999999831 11110 110 1112455566666677766
Q ss_pred HHcCCCCCCCCEEEEEcc
Q 025045 211 IKGRPELQGLPCFILGQS 228 (258)
Q Consensus 211 l~~~~~~~~~~i~l~G~S 228 (258)
... ..-|.-+||.
T Consensus 324 fG~-----~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGK-----SRYIANLGHG 336 (359)
T ss_pred hCc-----cceEEecCCC
Confidence 653 2246667774
No 283
>PRK14974 cell division protein FtsY; Provisional
Probab=27.91 E-value=4.4e+02 Score=23.51 Aligned_cols=67 Identities=24% Similarity=0.272 Sum_probs=39.9
Q ss_pred HHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCC--Cccc
Q 025045 169 IAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEP--RAWD 246 (258)
Q Consensus 169 l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p--~~v~ 246 (258)
....|+.++.+|-.|.... -....+++..+.+.+. +..++++..+.-|.-+...+..+. -.+.
T Consensus 218 ~~~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~~------pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~ 282 (336)
T PRK14974 218 AKARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVTK------PDLVIFVGDALAGNDAVEQAREFNEAVGID 282 (336)
T ss_pred HHhCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhhC------CceEEEeeccccchhHHHHHHHHHhcCCCC
Confidence 3446888999998765431 2244555555544332 335677777777776666665442 2467
Q ss_pred EEEE
Q 025045 247 GVIL 250 (258)
Q Consensus 247 ~vvl 250 (258)
++|+
T Consensus 283 giIl 286 (336)
T PRK14974 283 GVIL 286 (336)
T ss_pred EEEE
Confidence 7776
No 284
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=27.60 E-value=98 Score=24.56 Aligned_cols=20 Identities=20% Similarity=0.106 Sum_probs=17.3
Q ss_pred EEEEEcchHHHHHHHHHHhC
Q 025045 222 CFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 222 i~l~G~S~Gg~ia~~~a~~~ 241 (258)
=.++|-|.|+.++..++...
T Consensus 29 d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 29 KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred ceEEEECHHHHHHHHHHcCC
Confidence 58999999999999888643
No 285
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=26.99 E-value=69 Score=23.02 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=37.9
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHC-CcEEEEECC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEE
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAAS-GYGVYALDH--PGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFI 224 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~-G~~V~~~D~--rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l 224 (258)
||++.|..+++.+ .+++.|++. |+.++..|- +-.+................+.+...++.+... -....+++
T Consensus 1 vI~I~G~~gsGKS---T~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ii 75 (121)
T PF13207_consen 1 VIIISGPPGSGKS---TLAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQLQNK--PDNDNWII 75 (121)
T ss_dssp EEEEEESTTSSHH---HHHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHHHET--TT--EEEE
T ss_pred CEEEECCCCCCHH---HHHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhhhcc--CCCCeEEE
Confidence 5788888776543 356666665 999998887 444433222111111233344455555555331 12223556
Q ss_pred EE
Q 025045 225 LG 226 (258)
Q Consensus 225 ~G 226 (258)
-|
T Consensus 76 ~g 77 (121)
T PF13207_consen 76 DG 77 (121)
T ss_dssp EC
T ss_pred eC
Confidence 55
No 286
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=26.85 E-value=1.1e+02 Score=26.66 Aligned_cols=81 Identities=20% Similarity=0.349 Sum_probs=42.9
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCc-------EEEEECCCCCCCCCCCCCCCCCH-HHHH--------HHHHHHHHHH
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGY-------GVYALDHPGFGLSEGLHGYVPSF-DALV--------DNVIEIYTKI 211 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~-------~V~~~D~rG~G~S~~~~~~~~~~-~~~~--------~dl~~~l~~l 211 (258)
-|++.|.|...---.+.+...+.+.|. +++.+|..|-=..+... ...+ ..++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 455667665433223445555555677 89999998852222111 0111 1112 2445555444
Q ss_pred HcCCCCCCCCEEEEEcch-HHHHHHHHH
Q 025045 212 KGRPELQGLPCFILGQSM-GGAVTIKAH 238 (258)
Q Consensus 212 ~~~~~~~~~~i~l~G~S~-Gg~ia~~~a 238 (258)
+ +-+|+|-|- ||.+.-.+.
T Consensus 105 ~--------ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 105 K--------PTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred C--------CCEEEEeCCCCCCCCHHHH
Confidence 3 569999994 776665443
No 287
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=26.67 E-value=2.7e+02 Score=22.17 Aligned_cols=41 Identities=24% Similarity=0.239 Sum_probs=26.3
Q ss_pred ceEEEEEcCCCCCcc--chHHHHHHHHHHCCcEEEEECCC--CCC
Q 025045 145 KGVLFFCHGYGDTCT--FFFEGIARYIAASGYGVYALDHP--GFG 185 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~~--~~~~~~~~~l~~~G~~V~~~D~r--G~G 185 (258)
.++++++||-....- ..-..+.+.|.+.|..+...-++ |||
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~ 188 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHG 188 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSS
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCC
Confidence 567999999765432 12456778888888665554444 553
No 288
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=26.17 E-value=65 Score=25.71 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=23.0
Q ss_pred EEEEEcCCC---CCccchHHHHHHHHHHCCcEEEEEC
Q 025045 147 VLFFCHGYG---DTCTFFFEGIARYIAASGYGVYALD 180 (258)
Q Consensus 147 ~Vv~lHG~g---~~~~~~~~~~~~~l~~~G~~V~~~D 180 (258)
.||++|... .+.. .+..+.+.+.++||.++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~-~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVK-ALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHH-HHHHHHHHHHHCCCEEEEHH
Confidence 599999421 2222 36778889999999988764
No 289
>PRK07933 thymidylate kinase; Validated
Probab=25.87 E-value=1.5e+02 Score=24.26 Aligned_cols=40 Identities=25% Similarity=0.344 Sum_probs=29.9
Q ss_pred EEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCCCCCCC
Q 025045 148 LFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHPGFGLS 187 (258)
Q Consensus 148 Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~rG~G~S 187 (258)
+|.+-|.-+++ +.....++++|...|+.|+....+++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 46667764443 45577899999999999999999966543
No 290
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=25.60 E-value=1.6e+02 Score=19.52 Aligned_cols=22 Identities=27% Similarity=0.314 Sum_probs=18.1
Q ss_pred cchHHHHHHHHHHCCcEEEEEC
Q 025045 159 TFFFEGIARYIAASGYGVYALD 180 (258)
Q Consensus 159 ~~~~~~~~~~l~~~G~~V~~~D 180 (258)
+.....++..+++.|+.|+.+|
T Consensus 13 tt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 13 TTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHHCCCeEEEEC
Confidence 4446678899989999999998
No 291
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=25.35 E-value=1.1e+02 Score=24.74 Aligned_cols=57 Identities=23% Similarity=0.278 Sum_probs=33.6
Q ss_pred eEEEEEcCCCCCccc--hHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025045 146 GVLFFCHGYGDTCTF--FFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTK 210 (258)
Q Consensus 146 p~Vv~lHG~g~~~~~--~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~ 210 (258)
..|+++||-....-. +.....+.|.+.|.+|-.-.|+|.|-+ ...+.++|+.++++.
T Consensus 156 ~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 156 TPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp S-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 469999998665422 355677888888887777776654432 123555666666653
No 292
>PF08057 Ery_res_leader2: Erythromycin resistance leader peptide; InterPro: IPR012559 This family consists of erythromycin resistance gene leader peptides. These leader peptides are involved in the transcriptional attenuation control of the synthesis of the macrolide-lincosamide -streptogramin B resistance protein. It acts as a transcriptional attenuator, in contrast to other inducible erm genes. The mRNA leader sequence can fold in either of two mutually exclusive conformations, one of which is postulated to form in the absence of induction, and to contain two rho factor-independent terminators [].; GO: 0046677 response to antibiotic
Probab=25.01 E-value=31 Score=15.09 Aligned_cols=10 Identities=40% Similarity=0.720 Sum_probs=5.1
Q ss_pred CCCccccccc
Q 025045 1 MDSCLTLRFR 10 (258)
Q Consensus 1 ~~~~~~~~~~ 10 (258)
|.-||.+||-
T Consensus 1 mthsmrlrfp 10 (14)
T PF08057_consen 1 MTHSMRLRFP 10 (14)
T ss_pred Cccceeeecc
Confidence 4445555553
No 293
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=24.54 E-value=82 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=22.0
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECC
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~ 181 (258)
.-+++.|.|.+.. +..|+++||.|+.+|+
T Consensus 39 ~rvLvPgCG~g~D------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGYD------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSCH------HHHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChHH------HHHHHHCCCeEEEEec
Confidence 3577888876532 3567789999999998
No 294
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=24.45 E-value=1.4e+02 Score=22.72 Aligned_cols=41 Identities=20% Similarity=0.287 Sum_probs=26.1
Q ss_pred EEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCCCCCCCC
Q 025045 148 LFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHPGFGLSE 188 (258)
Q Consensus 148 Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~rG~G~S~ 188 (258)
+|.+-|..+++ +.+...+...|.++||.|..+-.-+||...
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 55666665444 556778899999999998866655665543
No 295
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=23.46 E-value=65 Score=28.34 Aligned_cols=18 Identities=28% Similarity=0.477 Sum_probs=16.2
Q ss_pred EEEEcchHHHHHHHHHHh
Q 025045 223 FILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 223 ~l~G~S~Gg~ia~~~a~~ 240 (258)
.+.|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 699999999999999864
No 296
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=23.41 E-value=7.1e+02 Score=24.42 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=29.8
Q ss_pred EEEEEcchHHHHHHHHHHhCC-CcccEEEEECcCCCC
Q 025045 222 CFILGQSMGGAVTIKAHLKEP-RAWDGVILVAPMCKK 257 (258)
Q Consensus 222 i~l~G~S~Gg~ia~~~a~~~p-~~v~~vvl~~p~~~l 257 (258)
|+-.+.|-||..+++.+.+.. ..|++++..-|.+++
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 556678899999999998764 469999999988776
No 297
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=23.13 E-value=2.5e+02 Score=24.08 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=35.8
Q ss_pred EEEEcCCCCCcc-chHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Q 025045 148 LFFCHGYGDTCT-FFFEGIARYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKG 213 (258)
Q Consensus 148 Vv~lHG~g~~~~-~~~~~~~~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~ 213 (258)
+|++-|+++++- .....+.+.+.+.++.|..++-...+..................+...++....
T Consensus 3 Liil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~~~~y~~~~~Ek~~R~~l~s~v~r~ls 69 (270)
T PF08433_consen 3 LIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGIDRNDYADSKKEKEARGSLKSAVERALS 69 (270)
T ss_dssp EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-TTSSS--GGGHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccchhhhhchhhhHHHHHHHHHHHHHhhc
Confidence 778889877764 345678888888899998888554442211111112344555666666666554
No 298
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=22.93 E-value=78 Score=26.53 Aligned_cols=28 Identities=11% Similarity=0.180 Sum_probs=20.3
Q ss_pred EEEEcCCCCCccchHHHHHHHHHHCCcEEEEECC
Q 025045 148 LFFCHGYGDTCTFFFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 148 Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~ 181 (258)
-|++.|.|.+.. +.+|+++||.|+.+|+
T Consensus 46 rvLvPgCGkg~D------~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSID------MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHH------HHHHHhCCCcEEEEec
Confidence 567777765422 3567789999999998
No 299
>PRK13690 hypothetical protein; Provisional
Probab=22.92 E-value=1.7e+02 Score=23.59 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcc
Q 025045 197 FDALVDNVIEIYTKIKGRPELQGLPCFILGQS 228 (258)
Q Consensus 197 ~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S 228 (258)
++...+++..+++.+.....+....+.++|-|
T Consensus 3 ~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcS 34 (184)
T PRK13690 3 LEEIKKQTRQILEELLEQANLKPGQIFVLGCS 34 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCEEEEecc
Confidence 45667788888888887777778899999999
No 300
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=22.86 E-value=5.9e+02 Score=23.28 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=30.5
Q ss_pred HHHHHHHCCcEEEEECCCCC---CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEc
Q 025045 165 IARYIAASGYGVYALDHPGF---GLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQ 227 (258)
Q Consensus 165 ~~~~l~~~G~~V~~~D~rG~---G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~ 227 (258)
-...|.+.|+.|+-++. |+ |+.. .+.....++.++.+...+.. .++.+.++.+.|-
T Consensus 138 Nl~~L~~~G~~ii~P~~-g~la~~~~g--~gr~~~~~~I~~~~~~~~~~----~~l~gk~vlITgG 196 (399)
T PRK05579 138 NLATLRSRGVEIIGPAS-GRLACGDVG--PGRMAEPEEIVAAAERALSP----KDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHCCCEEECCCC-ccccCCCcC--CCCCCCHHHHHHHHHHHhhh----cccCCCEEEEeCC
Confidence 34667788998886653 32 3221 12234555555554444422 2345667888887
No 301
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.62 E-value=1.4e+02 Score=24.76 Aligned_cols=21 Identities=29% Similarity=0.129 Sum_probs=17.4
Q ss_pred CEEEEEcchHHHHHHHHHHhC
Q 025045 221 PCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
.-.+.|-|+|+.++..++...
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCC
Confidence 347999999999999888643
No 302
>PRK00889 adenylylsulfate kinase; Provisional
Probab=22.35 E-value=1.8e+02 Score=22.66 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=26.2
Q ss_pred ceEEEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECC
Q 025045 145 KGVLFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~ 181 (258)
.+.++++.|..+++ +.....++..+...|..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 34588899987665 44456677788777887877764
No 303
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=21.70 E-value=6.1e+02 Score=22.99 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=29.1
Q ss_pred CCCCCCCEEEEEcchHHHHHHHHHHhCCCcccEEEEE
Q 025045 215 PELQGLPCFILGQSMGGAVTIKAHLKEPRAWDGVILV 251 (258)
Q Consensus 215 ~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~~v~~vvl~ 251 (258)
.++.-++.+|.|.|==|..++..|... .||++++-+
T Consensus 167 ~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~ 202 (367)
T PF10142_consen 167 FGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPI 202 (367)
T ss_pred cCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeE
Confidence 355677899999999999999998854 478887764
No 304
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=21.61 E-value=4.4e+02 Score=21.30 Aligned_cols=35 Identities=14% Similarity=-0.008 Sum_probs=22.2
Q ss_pred EEEEEcCCCCCccchHHHHHHHHHHCCcEEEEECC
Q 025045 147 VLFFCHGYGDTCTFFFEGIARYIAASGYGVYALDH 181 (258)
Q Consensus 147 ~Vv~lHG~g~~~~~~~~~~~~~l~~~G~~V~~~D~ 181 (258)
-|+++.=.......+...+.+.+.+.|+.+..+..
T Consensus 31 ~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~ 65 (210)
T cd03129 31 RVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLL 65 (210)
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEec
Confidence 36666544443444466777888888988776654
No 305
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=21.17 E-value=1.3e+02 Score=26.36 Aligned_cols=19 Identities=16% Similarity=0.137 Sum_probs=16.8
Q ss_pred EEEEEcchHHHHHHHHHHh
Q 025045 222 CFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 222 i~l~G~S~Gg~ia~~~a~~ 240 (258)
=.++|-|+|+.++..++..
T Consensus 45 d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 45 DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CEEEEECHHHHHHHHHHcC
Confidence 4799999999999998865
No 306
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=21.14 E-value=96 Score=26.70 Aligned_cols=38 Identities=11% Similarity=0.182 Sum_probs=27.6
Q ss_pred ceEEEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCC
Q 025045 145 KGVLFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHP 182 (258)
Q Consensus 145 ~p~Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~r 182 (258)
.|+||++.|+.+++ ......+...+--+|++|.++.-+
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 57899999986554 223566777776788999888654
No 307
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=21.10 E-value=1.1e+02 Score=26.21 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=16.2
Q ss_pred CCEEEEEcchHHHHHHHHH
Q 025045 220 LPCFILGQSMGGAVTIKAH 238 (258)
Q Consensus 220 ~~i~l~G~S~Gg~ia~~~a 238 (258)
.+..++|||+|=..|+.++
T Consensus 76 ~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCcEEeecCHHHHHHHHHh
Confidence 5789999999998887765
No 308
>PRK10279 hypothetical protein; Provisional
Probab=20.90 E-value=1.3e+02 Score=26.35 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=17.3
Q ss_pred CEEEEEcchHHHHHHHHHHh
Q 025045 221 PCFILGQSMGGAVTIKAHLK 240 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~ 240 (258)
.-.+.|-|+|+.++..+|..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcC
Confidence 45899999999999998854
No 309
>PRK10867 signal recognition particle protein; Provisional
Probab=20.87 E-value=6.8e+02 Score=23.23 Aligned_cols=69 Identities=20% Similarity=0.245 Sum_probs=38.5
Q ss_pred HHHHHCCcEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcchHHHHHHHHHHhCCC--c
Q 025045 167 RYIAASGYGVYALDHPGFGLSEGLHGYVPSFDALVDNVIEIYTKIKGRPELQGLPCFILGQSMGGAVTIKAHLKEPR--A 244 (258)
Q Consensus 167 ~~l~~~G~~V~~~D~rG~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~~~~i~l~G~S~Gg~ia~~~a~~~p~--~ 244 (258)
......+|.++.+|-.|.... -+...+.+..+.+.+. +..++++-.++-|.-+...+..+.+ .
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v~------p~evllVlda~~gq~av~~a~~F~~~~~ 241 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAVN------PDEILLVVDAMTGQDAVNTAKAFNEALG 241 (433)
T ss_pred HHHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhhC------CCeEEEEEecccHHHHHHHHHHHHhhCC
Confidence 344456899999998876421 1233344444444332 2345666666666666666654432 3
Q ss_pred ccEEEE
Q 025045 245 WDGVIL 250 (258)
Q Consensus 245 v~~vvl 250 (258)
+.++|+
T Consensus 242 i~giIl 247 (433)
T PRK10867 242 LTGVIL 247 (433)
T ss_pred CCEEEE
Confidence 566665
No 310
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=20.75 E-value=1.1e+02 Score=26.09 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=15.9
Q ss_pred CCEEEEEcchHHHHHHHHH
Q 025045 220 LPCFILGQSMGGAVTIKAH 238 (258)
Q Consensus 220 ~~i~l~G~S~Gg~ia~~~a 238 (258)
.+-.++|||+|-..|+.++
T Consensus 82 ~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred cccEEEecCHHHHHHHHHh
Confidence 3579999999999887765
No 311
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.72 E-value=1.4e+02 Score=24.51 Aligned_cols=22 Identities=27% Similarity=0.333 Sum_probs=18.7
Q ss_pred CEEEEEcchHHHHHHHHHHhCC
Q 025045 221 PCFILGQSMGGAVTIKAHLKEP 242 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~p 242 (258)
.-.+.|.|+|+.++..++...+
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCCc
Confidence 3489999999999999987654
No 312
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=20.50 E-value=1.6e+02 Score=23.16 Aligned_cols=21 Identities=24% Similarity=0.159 Sum_probs=17.7
Q ss_pred CEEEEEcchHHHHHHHHHHhC
Q 025045 221 PCFILGQSMGGAVTIKAHLKE 241 (258)
Q Consensus 221 ~i~l~G~S~Gg~ia~~~a~~~ 241 (258)
.=.+.|-|.|+.++..++...
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCC
Confidence 458999999999999887654
No 313
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=20.42 E-value=1.8e+02 Score=22.38 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=22.2
Q ss_pred EEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCC
Q 025045 149 FFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHP 182 (258)
Q Consensus 149 v~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~r 182 (258)
.+..+-||.+ +..-..++..++++|+.|+.+|.-
T Consensus 3 ~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 3 VVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3444434333 333557888898999999999754
No 314
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=20.36 E-value=34 Score=26.93 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHHHHHcCC--CCCCCCEEEEEcchHHH
Q 025045 196 SFDALVDNVIEIYTKIKGRP--ELQGLPCFILGQSMGGA 232 (258)
Q Consensus 196 ~~~~~~~dl~~~l~~l~~~~--~~~~~~i~l~G~S~Gg~ 232 (258)
+.+.+++-+..+-+.+.+.. ...+++|.|+|.|++..
T Consensus 78 ~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 78 SADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 45555555544445555332 23566899999999887
No 315
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=20.33 E-value=2.1e+02 Score=23.91 Aligned_cols=39 Identities=15% Similarity=0.096 Sum_probs=27.8
Q ss_pred EEEEcCCCCCc-cchHHHHHHHHHHCCcEEEEECCCCCCCC
Q 025045 148 LFFCHGYGDTC-TFFFEGIARYIAASGYGVYALDHPGFGLS 187 (258)
Q Consensus 148 Vv~lHG~g~~~-~~~~~~~~~~l~~~G~~V~~~D~rG~G~S 187 (258)
|.+. |-||.+ +.....++..|++.|+.|+.+|.--.|.+
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n~ 43 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKADS 43 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCCc
Confidence 4455 655554 33456789999999999999998655543
Done!