BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025046
         (258 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3G4D|A Chain A, Crystal Structure Of (+)-Delta-Cadinene Synthase From
           Gossypium Arboreum And Evolutionary Divergence Of Metal
           Binding Motifs For Catalysis
 pdb|3G4D|B Chain B, Crystal Structure Of (+)-Delta-Cadinene Synthase From
           Gossypium Arboreum And Evolutionary Divergence Of Metal
           Binding Motifs For Catalysis
 pdb|3G4F|A Chain A, Crystal Structure Of (+)- -Cadinene Synthase From
           Gossypium Arboreum In Complex With 2-Fluorofarnesyl
           Diphosphate
 pdb|3G4F|B Chain B, Crystal Structure Of (+)- -Cadinene Synthase From
           Gossypium Arboreum In Complex With 2-Fluorofarnesyl
           Diphosphate
          Length = 554

 Score =  233 bits (594), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 108/259 (41%), Positives = 165/259 (63%), Gaps = 1/259 (0%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           +TK I MASI+DDT+D+Y  +EEL  +  A++RWDI  +D +PEYMK  YKALLD Y E+
Sbjct: 296 LTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEEM 355

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
            Q +A+ GR   + Y K  M  L Q Y V+AKW+ + Y P++EE+    L + GY MLA 
Sbjct: 356 VQLVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLAI 415

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            SF+GM ++   E F+W + +PKI +AS++I R M+D+  H+F+ +R    + +ECY ++
Sbjct: 416 TSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEE 475

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKGDCYTH 240
           +G               +AWKD+N+EFL+PT  P  ++ R  N+ARV++ LY++GD YT+
Sbjct: 476 YGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535

Query: 241 -SHAIKDQIAAVLRDPVTI 258
              A K  I ++L +P+ +
Sbjct: 536 VGKAAKGGITSLLIEPIAL 554


>pdb|3LZ9|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase M4
           Mut Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl
           Diphospha
 pdb|3M00|A Chain A, Crystal Structure Of 5-Epi-Aristolochene Synthase M4
           Mutant Complexed With (2-Cis,6-Trans)-2-Fluorofarnesyl
           Diphosphate
          Length = 550

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 159/260 (61%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 292 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 351

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y++LAT
Sbjct: 352 EKELSSAGRSHIVCHAIERMKEIVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYLLAT 411

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 412 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 470

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 471 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIIEVTYIHNLDGYT 530

Query: 240 HSHAI-KDQIAAVLRDPVTI 258
           H   + K  I  +L D + I
Sbjct: 531 HPEKVLKPHIINLLVDSIKI 550


>pdb|1HX9|A Chain A, Crystal Structure Of Teas W273s Form 1
 pdb|1HXA|A Chain A, Crystal Structure Of Teas W273s Form 2
          Length = 548

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 290 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 349

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 350 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 409

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 410 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 468

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 469 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 528

Query: 240 H-SHAIKDQIAAVLRDPVTI 258
           H    +K  I  +L D + I
Sbjct: 529 HPEEVLKPHIINLLVDSIKI 548


>pdb|5EAT|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum With
           Substrate Analog Farnesyl Hydroxyphosphonate
          Length = 548

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 290 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 349

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 350 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 409

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 410 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 468

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 469 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 528

Query: 240 H-SHAIKDQIAAVLRDPVTI 258
           H    +K  I  +L D + I
Sbjct: 529 HPEEVLKPHIINLLVDSIKI 548


>pdb|5EAU|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum
          Length = 548

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 290 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 349

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 350 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 409

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 410 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 468

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 469 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 528

Query: 240 HSHAI-KDQIAAVLRDPVTI 258
           H   + K  I  +L D + I
Sbjct: 529 HPEKVLKPHIINLLVDSIKI 548


>pdb|5EAS|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum
          Length = 548

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 290 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 349

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 350 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 409

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 410 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 468

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 469 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 528

Query: 240 HSHAI-KDQIAAVLRDPVTI 258
           H   + K  I  +L D + I
Sbjct: 529 HPEKVLKPHIINLLVDSIKI 548


>pdb|3M01|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase
           Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl
           Diphosphate
 pdb|3M02|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase
           Complexed With (2-Cis,6-Trans)-2-Fluorofarnesyl
           Diphosphate
          Length = 550

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 292 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 351

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 352 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 411

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 412 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 470

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 471 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 530

Query: 240 HSHAI-KDQIAAVLRDPVTI 258
           H   + K  I  +L D + I
Sbjct: 531 HPEKVLKPHIINLLVDSIKI 550


>pdb|4DI5|A Chain A, Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synthase
           From Nicotiana Tobaccum With Geraniline
          Length = 535

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 277 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 336

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 337 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 396

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 397 TSYLGM-KSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 455

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 456 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 515

Query: 240 HSHAI-KDQIAAVLRDPVTI 258
           H   + K  I  +L D + I
Sbjct: 516 HPEKVLKPHIINLLVDSIKI 535


>pdb|1HXG|A Chain A, Crystal Structure Of Teas W273sC440W
          Length = 548

 Score =  200 bits (509), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 290 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 349

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 350 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 409

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 410 TSYLGM-KSATEQDFEWLSKNPKILEASVIIWRVIDDTATYEVEKSRGQIATGIECCMRD 468

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 469 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 528

Query: 240 H-SHAIKDQIAAVLRDPVTI 258
           H    +K  I  +L D + I
Sbjct: 529 HPEEVLKPHIINLLVDSIKI 548


>pdb|1HXC|A Chain A, Crystal Structure Of Teas C440w
          Length = 548

 Score =  200 bits (508), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 3/260 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + KTI M SI+DDTFDAYG  +EL+ + +A+QRWDI  +D LP+YMK+ YKA+LD Y + 
Sbjct: 290 LVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDY 349

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
           E++L+  GRS  + +  E+M+E+V+ Y V++ W  EGY P   EY    L +  Y+ LAT
Sbjct: 350 EKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLAT 409

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            S+LGM + A ++ FEW+SKNPKI  AS +I R+++D  +++ E+ RG + TG+EC  + 
Sbjct: 410 TSYLGM-KSATEQDFEWLSKNPKILEASVIIWRVIDDTATYEVEKSRGQIATGIECCMRD 468

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKG-DCYT 239
           +G                AWKD+NE  LRPT      +    N+AR++E  Y    D YT
Sbjct: 469 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYT 528

Query: 240 H-SHAIKDQIAAVLRDPVTI 258
           H    +K  I  +L D + I
Sbjct: 529 HPEEVLKPHIINLLVDSIKI 548


>pdb|2J5C|A Chain A, Rational Conversion Of Substrate And Product Specificity
           In A Monoterpene Synthase. Structural Insights Into The
           Molecular Basis Of Rapid Evolution.
 pdb|2J5C|B Chain B, Rational Conversion Of Substrate And Product Specificity
           In A Monoterpene Synthase. Structural Insights Into The
           Molecular Basis Of Rapid Evolution
          Length = 569

 Score =  133 bits (335), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 132/255 (51%), Gaps = 5/255 (1%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           +TK   + + IDD FD YG  EEL+LF  A+QRWDI +M  LP YM++ Y AL +  NE+
Sbjct: 312 LTKINALVTTIDDVFDIYGTLEELQLFTTAIQRWDIESMKQLPPYMQICYLALFNFVNEM 371

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
             D  ++       Y ++    L++ Y ++AKW  +G+ P+ EEY     +S G   + +
Sbjct: 372 AYDTLRDKGFDSTPYLRKVWVGLIESYLIEAKWYYKGHKPSLEEYMKNSWISIGGIPILS 431

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
           + F  + +   +EA E + K   I RAS  I RL +D+ +   E +RG V   V+CY  +
Sbjct: 432 HLFFRLTDSIEEEAAESMHKYHDIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNE 491

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYK-KGDCYT 239
                              WK MN+E +  ++F    +E   N+AR+ +++Y+ + D + 
Sbjct: 492 KNASEEEAREHVRSLIDQTWKMMNKEMM-TSSFSKYFVEVSANLARMAQWIYQHESDGFG 550

Query: 240 HSHAIKDQIAAVLRD 254
             H++   +  +LRD
Sbjct: 551 MQHSL---VNKMLRD 562


>pdb|3SAE|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
           Prospective Target For Advanced Biofuels Production
 pdb|3SDQ|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
           Prospective Target For Advanced Biofuels Production
 pdb|3SDR|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
           Prospective Target For Advanced Biofuels Production
 pdb|3SDT|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
           Prospective Target For Advanced Biofuels Production
 pdb|3SDU|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
           Prospective Target For Advanced Biofuels Production
 pdb|3SDV|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
           Prospective Target For Advanced Biofuels Production
          Length = 817

 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 5/262 (1%)

Query: 2   TKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEVE 61
           TK   + +++DD +D YG  +ELKLF EAV+RWD+   + LP+YMK+ Y+   D  +EV 
Sbjct: 556 TKVACLQTVLDDMYDTYGTLDELKLFTEAVRRWDLSFTENLPDYMKLCYQIYYDIVHEVA 615

Query: 62  QDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATN 121
            +  KE     + + ++  ++ +  Y+ +A+W +  YVPT +EY   G+ S G  +L  +
Sbjct: 616 WEAEKEQGRELVSFFRKGWEDYLLGYYEEAEWLAAEYVPTLDEYIKNGITSIGQRILLLS 675

Query: 122 SFLGM-CEVANKEAFEWISKNPK--ISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYC 178
             L M  ++ ++EA E +    +  ++  +S+ISRL +D  +++ E+ RG + + +ECY 
Sbjct: 676 GVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTKTYKAEKARGELASSIECYM 735

Query: 179 KQHGXXXXXXXXXXXXXXXN-AWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKGDC 237
           K H                  A K++  EFL+P   P A  +  F   RV   ++K GD 
Sbjct: 736 KDHPECTEEEALDHIYSILEPAVKELTREFLKPDDVPFACKKMLFEETRVTMVIFKDGDG 795

Query: 238 YTHSH-AIKDQIAAVLRDPVTI 258
           +  S   +KD I   L +P+ +
Sbjct: 796 FGVSKLEVKDHIKECLIEPLPL 817


>pdb|3N0F|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar
           Leaves (Populus X Canescens)
 pdb|3N0F|B Chain B, Crystal Structure Of Isoprene Synthase From Grey Poplar
           Leaves (Populus X Canescens)
 pdb|3N0G|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar
           Leaves (Populus X Canescens) In Complex With Three Mg2+
           Ions And Dimethylallyl-S-Thiolodiphosphate
 pdb|3N0G|B Chain B, Crystal Structure Of Isoprene Synthase From Grey Poplar
           Leaves (Populus X Canescens) In Complex With Three Mg2+
           Ions And Dimethylallyl-S-Thiolodiphosphate
          Length = 555

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 1/257 (0%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           + K     +IIDD +D YG  +EL+LF +AV+RWD+ A++ LP+YMK+ + AL +T NE+
Sbjct: 294 VAKMFSFVTIIDDIYDVYGTLDELELFTDAVERWDVNAINDLPDYMKLCFLALYNTINEI 353

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
             D  K+   + L Y  +   +L   +  +AKW      PT+++Y+     S    +   
Sbjct: 354 AYDNLKDKGENILPYLTKAWADLCNAFLQEAKWLYNKSTPTFDDYFGNAWKSSSGPLQLI 413

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
            ++  + +   KE  E + K   I    S I RL ND+ S   E  RG     V CY + 
Sbjct: 414 FAYFAVVQNIKKEEIENLQKYHDIISRPSHIFRLCNDLASASAEIARGETANSVSCYMRT 473

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKGDCYTH 240
            G                 WK MN+E L  + F    +E   N+AR     Y  GD +T 
Sbjct: 474 KGISEELATESVMNLIDETWKKMNKEKLGGSLFAKPFVETAINLARQSHCTYHNGDAHTS 533

Query: 241 SHAI-KDQIAAVLRDPV 256
              + + ++ +V+ +P+
Sbjct: 534 PDELTRKRVLSVITEPI 550


>pdb|1N1B|A Chain A, Crystal Structure Of (+)-bornyl Diphosphate Synthase From
           Sage
 pdb|1N1B|B Chain B, Crystal Structure Of (+)-bornyl Diphosphate Synthase From
           Sage
 pdb|1N1Z|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
           Pyrophosphate
 pdb|1N1Z|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
           Pyrophosphate
 pdb|1N20|A Chain A, (+)-bornyl Diphosphate Synthase: Complex With Mg And
           3-aza- 2,3-dihydrogeranyl Diphosphate
 pdb|1N20|B Chain B, (+)-bornyl Diphosphate Synthase: Complex With Mg And
           3-aza- 2,3-dihydrogeranyl Diphosphate
 pdb|1N21|A Chain A, (+)-Bornyl Diphosphate Synthase: Cocrystal With Mg And 3-
           Aza-2,3-Dihydrogeranyl Diphosphate
 pdb|1N22|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
           Pyrophosphate, And (4r)-7-Aza-7,8-Dihydrolimonene
 pdb|1N22|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
           Pyrophosphate, And (4r)-7-Aza-7,8-Dihydrolimonene
 pdb|1N23|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
           Pyrophosphate, And (1r,4s)-2-Azabornane
 pdb|1N23|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
           Pyrophosphate, And (1r,4s)-2-Azabornane
 pdb|1N24|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
           Product
 pdb|1N24|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
           Product
          Length = 549

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 2/253 (0%)

Query: 5   IYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEVEQDL 64
           I +A++IDD +D YG  +EL+LF +  +RWD  ++  LP YM++ Y  + +  ++   D+
Sbjct: 295 IVLATVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDI 354

Query: 65  AKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATNSFL 124
            KE     L+Y ++ + +LV+ YF +AKW   GY P+ +EY  +  +S     + + ++ 
Sbjct: 355 LKEHGFFCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYF 414

Query: 125 GMCEVANKEA-FEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQHGX 183
                ++  A  + + +   I   + +I RL +D+ +  FE  RG V   ++CY K+   
Sbjct: 415 TFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMKETNA 474

Query: 184 XXXXXXXXXXXXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKGDCYTHSHA 243
                          AWKDMN        FP  ++    NI RV +F+Y  GD +   H+
Sbjct: 475 SEEEAVEHVKFLIREAWKDMNTAIAAGYPFPDGMVAGAANIGRVAQFIYLHGDGFGVQHS 534

Query: 244 -IKDQIAAVLRDP 255
              + IA +L +P
Sbjct: 535 KTYEHIAGLLFEP 547


>pdb|3S9V|A Chain A, Abietadiene Synthase From Abies Grandis
 pdb|3S9V|B Chain B, Abietadiene Synthase From Abies Grandis
 pdb|3S9V|C Chain C, Abietadiene Synthase From Abies Grandis
 pdb|3S9V|D Chain D, Abietadiene Synthase From Abies Grandis
          Length = 785

 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 12/262 (4%)

Query: 2   TKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEVE 61
           TKT     I+DD +DA+G  ++LKLF E+V+RWD+  +D +P+ MK+ +    +T+N   
Sbjct: 528 TKTSNFTVILDDLYDAHGSLDDLKLFTESVKRWDLSLVDQMPQQMKICFVGFYNTFN--- 584

Query: 62  QDLAKEGRS----SYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFM 117
            D+AKEGR       L Y +   +  ++ Y  +A+WS   YVP++ EY     VS     
Sbjct: 585 -DIAKEGRERQGRDVLGYIQNVWKVQLEAYTKEAEWSEAKYVPSFNEYIENASVSIALGT 643

Query: 118 LATNSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECY 177
           +   S L   EV   E    I +  +  +   +  RL+ND  ++Q E+ +G V + ++CY
Sbjct: 644 VVLISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAERGQGEVASAIQCY 703

Query: 178 CKQHGXXXXXXXXXXX-XXXXNAWKDMNEEFLRPTAFPVALIERPFNIARVLEFLYKKGD 236
            K H                 NA +++N EF+     P       F  AR+++  Y +GD
Sbjct: 704 MKDHPKISEEEALQHVYSVMENALEELNREFVN-NKIPDIYKRLVFETARIMQLFYMQGD 762

Query: 237 CYTHSH--AIKDQIAAVLRDPV 256
             T SH   IK+ +   L  PV
Sbjct: 763 GLTLSHDMEIKEHVKNCLFQPV 784


>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
           Fluorogeranyl Diphosphate (Fgpp).
 pdb|2ONG|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
           Fluorogeranyl Diphosphate (Fgpp).
 pdb|2ONH|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
           Fluorolinalyl Diphosphate(flpp)
 pdb|2ONH|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
           Fluorolinalyl Diphosphate(flpp)
          Length = 543

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 2/257 (0%)

Query: 1   MTKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEV 60
           M K   + ++IDD +D YG  EEL+ F + ++RWDI ++D LP+YM++ + AL +  ++ 
Sbjct: 285 MGKVNALITVIDDIYDVYGTLEELEQFTDLIRRWDINSIDQLPDYMQLCFLALNNFVDDT 344

Query: 61  EQDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLAT 120
             D+ KE   + + Y ++   +L   Y V+A+W   G+ P+ EEY      S     + T
Sbjct: 345 SYDVMKEKGVNVIPYLRQSWVDLADKYMVEARWFYGGHKPSLEEYLENSWQSISGPCMLT 404

Query: 121 NSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQ 180
           + F  + +   KE  + + K   + R SS + RL +D+ +   E  RG V   ++CY   
Sbjct: 405 HIFFRVTDSFTKETVDSLYKYHDLVRWSSFVLRLADDLGTSVEEVSRGDVPKSLQCYMSD 464

Query: 181 HGXXXXXXXXXXXXXXXNAWKDMNEEFL-RPTAFPVALIERPFNIARVLEFLYKKGDCYT 239
           +                  WK MN E + + + F    I    ++ R+ + +Y  GD + 
Sbjct: 465 YNASEAEARKHVKWLIAEVWKKMNAERVSKDSPFGKDFIGCAVDLGRMAQLMYHNGDGHG 524

Query: 240 HSHA-IKDQIAAVLRDP 255
             H  I  Q+   L +P
Sbjct: 525 TQHPIIHQQMTRTLFEP 541


>pdb|3P5P|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew
           (Taxus Brevifolia) In Complex With Mg2+ And
           13-Aza-13,14-Dihydrocopalyl Diphosphate
 pdb|3P5R|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew
           (Taxus Brevifolia) In Complex With Mg2+ And
           2-Fluorogeranylgeranyl Diphosphate
 pdb|3P5R|B Chain B, Crystal Structure Of Taxadiene Synthase From Pacific Yew
           (Taxus Brevifolia) In Complex With Mg2+ And
           2-Fluorogeranylgeranyl Diphosphate
          Length = 764

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 3/260 (1%)

Query: 2   TKTIYMASIIDDTFDAYGFFEELKLFVEAVQRWDIGAMDILPEYMKVLYKALLDTYNEVE 61
           TK   +  + DD  D +   +ELK F E V+RWD   +  +PE M+  +K       EV 
Sbjct: 497 TKIGCLQVLFDDMADIFATLDELKSFTEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVN 556

Query: 62  QDLAKEGRSSYLRYDKEKMQELVQMYFVQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATN 121
            D+ K      L + ++  +     Y  + +W   GY+PT+EEY     +S G       
Sbjct: 557 NDVVKVQGRDMLAHIRKPWELYFNCYVQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQ 616

Query: 122 SFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQFEQKRGHVTTGVECYCKQH 181
             L M E+   +  E +     +    S+  RL ND  ++Q E+ RG   +G+ CY K +
Sbjct: 617 PILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDN 676

Query: 182 -GXXXXXXXXXXXXXXXNAWKDMNEEFLRPTA-FPVALIERPFNIARVLEFLYKKGDCY- 238
            G                A K+ + E+ +P+   P+      FN+   ++  YK  D Y 
Sbjct: 677 PGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYG 736

Query: 239 THSHAIKDQIAAVLRDPVTI 258
             +  IKD I  V  DP+ +
Sbjct: 737 IANEEIKDYIRKVYIDPIQV 756


>pdb|2YX7|A Chain A, Crystals Structure Of T132a Mutant Of St1022 From
           Sulfolobus Tokodaii 7
 pdb|2PMH|A Chain A, Crystal Structure Of Thr132ala Of St1022 From Sulfolobus
           Tokodaii
          Length = 150

 Score = 30.0 bits (66), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 89  VQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATNSFLGMCEVANKEAF-----EWISKNPK 143
           V+AK+    +V    +   +  V G YF+L  N F+ M     +E F     E +   P+
Sbjct: 69  VKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMSIPE 128

Query: 144 ISRASS 149
           + RAS+
Sbjct: 129 VERAST 134


>pdb|2EFO|A Chain A, Crystal Structure Of Tyr77 To Ala Of St1022 From
           Sulfolobus Tokodaii 7
 pdb|2EFP|A Chain A, Crystal Structure Of Tyr77 To Ala Of St1022-Glutamine
           Complex From Sulolobus Tokodaii 7
          Length = 150

 Score = 30.0 bits (66), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 89  VQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATNSFLGMCEVANKEAF-----EWISKNPK 143
           V+AK+    +V    +   +  V G YF+L  N F+ M     +E F     E +   P+
Sbjct: 69  VKAKYGKNAHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMSIPE 128

Query: 144 ISRASS 149
           + R S+
Sbjct: 129 VERTST 134


>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading
           Pneumococcal Virulence Factor Spua
          Length = 714

 Score = 28.9 bits (63), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 117 MLATNSFLGMCEVANKEAFEWISKNPKISRASSVISRLMNDIVSHQ 162
           +LA  +  G   +AN +  EW  K  K++  ++ + R+  +  SH+
Sbjct: 667 VLADENQAGPVGIANPKGLEWTEKGLKLNALTATVLRVSQNGTSHE 712


>pdb|2EFN|A Chain A, Crystal Structure Of Ser 32 To Ala Of St1022 From
           Sulfolobus Tokodaii 7
 pdb|2PN6|A Chain A, Crystal Structure Of S32a Of St1022-Gln Complex From
           Sulfolobus Tokodaii
          Length = 150

 Score = 28.5 bits (62), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 89  VQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATNSFLGMCEVANKEAF-----EWISKNPK 143
           V+AK+    +V    +   +  V G YF+L  N F+ M     +E F     E +   P+
Sbjct: 69  VKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMSIPE 128

Query: 144 ISRASS 149
           + R S+
Sbjct: 129 VERTST 134


>pdb|2E7W|A Chain A, Crystal Structure Of The LrpASNC LIKE TRANSCRIPTIONAL
           REGULATORS FROM Sulfolobus Tokodaii 7
 pdb|2E7X|A Chain A, Structure Of The LrpASNC LIKE TRANSCRIPTIONAL REGULATOR
           FROM Sulfolobus Tokodaii 7 Complexed With Its Cognate
           Ligand
          Length = 150

 Score = 28.5 bits (62), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 89  VQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATNSFLGMCEVANKEAF-----EWISKNPK 143
           V+AK+    +V    +   +  V G YF+L  N F+ M     +E F     E +   P+
Sbjct: 69  VKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMSIPE 128

Query: 144 ISRASS 149
           + R S+
Sbjct: 129 VERTST 134


>pdb|2EFQ|A Chain A, Crystal Structure Of Thr134 To Ala Of St1022-Glutamine
           Complex From Sulfolobus Tokodaii 7
 pdb|2YX4|A Chain A, Crystal Structure Of T134a Of St1022 From Sulfolobus
           Tokodaii
          Length = 150

 Score = 28.5 bits (62), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 89  VQAKWSSEGYVPTWEEYYPVGLVSGGYFMLATNSFLGMCEVANKEAF-----EWISKNPK 143
           V+AK+    +V    +   +  V G YF+L  N F+ M     +E F     E +   P+
Sbjct: 69  VKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTREEFMEKFLERVMSIPE 128

Query: 144 ISRASS 149
           + R S+
Sbjct: 129 VERTSA 134


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.136    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,453,015
Number of Sequences: 62578
Number of extensions: 276568
Number of successful extensions: 666
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 627
Number of HSP's gapped (non-prelim): 30
length of query: 258
length of database: 14,973,337
effective HSP length: 97
effective length of query: 161
effective length of database: 8,903,271
effective search space: 1433426631
effective search space used: 1433426631
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)