BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025050
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2 subunit beta OS=Malus
domestica PE=2 SV=2
Length = 271
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/246 (81%), Positives = 217/246 (88%), Gaps = 1/246 (0%)
Query: 1 MTDENQVDVKDEV-AELAPFDPTKKKKKKKVVIQDPSDDSVDKLAEKTETLSVSEGLEST 59
M D+NQ +VKDEV A++APFDPTKKKKKK+VVIQD +DDSV KLAEK E + SEG EST
Sbjct: 1 MADDNQNEVKDEVVADIAPFDPTKKKKKKEVVIQDTTDDSVGKLAEKAEACTASEGQEST 60
Query: 60 FTGLKKKKKKPVESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYE 119
F GLKKKKKKP+E+S+LN+E GDA +DL+ GED+E +G YPWEGSDRDY YE
Sbjct: 61 FAGLKKKKKKPIETSILNEESGDAVEDLNERTGEDEEGEGIVLETPSYPWEGSDRDYTYE 120
Query: 120 ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMT 179
ELL RVF ILRENNP+LAGDRRRTVMRPPQVLREGTKK VFVNFMDLCKTMHRQPDHVM
Sbjct: 121 ELLDRVFTILRENNPDLAGDRRRTVMRPPQVLREGTKKAVFVNFMDLCKTMHRQPDHVMA 180
Query: 180 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLF 239
FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGC+SPDTILSKENRLF
Sbjct: 181 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQSPDTILSKENRLF 240
Query: 240 FLRCEK 245
FLRCEK
Sbjct: 241 FLRCEK 246
>sp|O24473|IF2B_WHEAT Eukaryotic translation initiation factor 2 subunit beta OS=Triticum
aestivum PE=1 SV=1
Length = 270
Score = 362 bits (928), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/260 (75%), Positives = 219/260 (84%), Gaps = 7/260 (2%)
Query: 1 MTDENQVDVKDEVAELAPFDPTKKKKKKKVVIQDPSDDSVDKLAEKTETLSVSEGLESTF 60
M DE Q++ K+E E+APFDPTKKKKKKKVVIQDP+D+ VDKLAEKTE LSV+E E++F
Sbjct: 1 MADEEQMERKEEATEIAPFDPTKKKKKKKVVIQDPADE-VDKLAEKTEGLSVTESGEASF 59
Query: 61 TGLKKKKKKPVESSLLNDEIGDAGDDLDGHVGEDDEADGS--GGPRQRYPWEGSDRDYEY 118
GLKKKKKK VE E GD D LD VGED++ +G GG Q YPWEG+DRDY+Y
Sbjct: 60 VGLKKKKKKLVELDPSLVEAGDGEDTLDDQVGEDEQGEGIVLGGATQ-YPWEGTDRDYKY 118
Query: 119 EELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM 178
+ELLGRVFNILRENNP+LAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP+HVM
Sbjct: 119 DELLGRVFNILRENNPDLAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVM 178
Query: 179 TFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRL 238
FLLAE+GTSGSLDGQQRLV+KGRFAPKNFE ILRRY+NEYVIC GCKSPDTILSKENRL
Sbjct: 179 MFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEAILRRYINEYVICHGCKSPDTILSKENRL 238
Query: 239 FFLRCEKVKAHIQSYYLCPI 258
FFLRCE+ + S + PI
Sbjct: 239 FFLRCEQCGS---SRSVAPI 255
>sp|Q41969|IF2B_ARATH Eukaryotic translation initiation factor 2 subunit beta
OS=Arabidopsis thaliana GN=EMB1401 PE=2 SV=3
Length = 268
Score = 358 bits (920), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/250 (75%), Positives = 216/250 (86%), Gaps = 2/250 (0%)
Query: 1 MTDENQVDVKDEVAELAPFDPTKKKKKKKVVIQDPSDDSVDK-LAEKTETLSVSEGLEST 59
M DE ++++E +LAPFDP+KKKKKKKVVIQ+P +D + EK+++L V++GLES+
Sbjct: 1 MADEIN-EIREEQEQLAPFDPSKKKKKKKVVIQEPVEDLAESSQTEKSDSLPVNDGLESS 59
Query: 60 FTGLKKKKKKPVESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYE 119
FTG+KKKKKKP ESSLLN+E DAG+DLD ++ E + +QRYPWEGS+RDY Y+
Sbjct: 60 FTGMKKKKKKPTESSLLNNESVDAGEDLDEIANDEQEGEEGIVLQQRYPWEGSERDYIYD 119
Query: 120 ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMT 179
ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM
Sbjct: 120 ELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMQ 179
Query: 180 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLF 239
+LLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+ +YVICLGCKSPDTILSKENRLF
Sbjct: 180 YLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYITDYVICLGCKSPDTILSKENRLF 239
Query: 240 FLRCEKVKAH 249
FLRCEK +
Sbjct: 240 FLRCEKCGSQ 249
>sp|Q99L45|IF2B_MOUSE Eukaryotic translation initiation factor 2 subunit 2 OS=Mus
musculus GN=Eif2s2 PE=1 SV=1
Length = 331
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 117/153 (76%), Gaps = 1/153 (0%)
Query: 93 EDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVL 151
ED + D + W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+
Sbjct: 149 EDSKKDDGISFSSQTAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVV 208
Query: 152 REGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGI 211
R GTKKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +
Sbjct: 209 RVGTKKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENV 268
Query: 212 LRRYVNEYVICLGCKSPDTILSKENRLFFLRCE 244
LRRY+ EYV C C+SPDTIL K+ RL+FL+CE
Sbjct: 269 LRRYIKEYVTCHTCRSPDTILQKDTRLYFLQCE 301
>sp|Q5R4T9|IF2B_PONAB Eukaryotic translation initiation factor 2 subunit 2 OS=Pongo
abelii GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 119/160 (74%), Gaps = 2/160 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VNEYVICLGCKSPDTILSKENRLFFLRCEKVKAHIQSYYL 255
+ EYV C C+SPDTIL K+ RL+FL+CE + + +
Sbjct: 275 IKEYVTCHTCRSPDTILQKDTRLYFLQCETCHSRCSAASI 314
>sp|P41035|IF2B_RABIT Eukaryotic translation initiation factor 2 subunit 2 OS=Oryctolagus
cuniculus GN=EIF2S2 PE=1 SV=1
Length = 333
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VNEYVICLGCKSPDTILSKENRLFFLRCE 244
+ EYV C C+SPDTIL K+ RL+FL+CE
Sbjct: 275 IKEYVTCHTCRSPDTILQKDTRLYFLQCE 303
>sp|P20042|IF2B_HUMAN Eukaryotic translation initiation factor 2 subunit 2 OS=Homo
sapiens GN=EIF2S2 PE=1 SV=2
Length = 333
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VNEYVICLGCKSPDTILSKENRLFFLRCE 244
+ EYV C C+SPDTIL K+ RL+FL+CE
Sbjct: 275 IKEYVTCHTCRSPDTILQKDTRLYFLQCE 303
>sp|Q5E9D0|IF2B_BOVIN Eukaryotic translation initiation factor 2 subunit 2 OS=Bos taurus
GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
Query: 98 DGSGGPRQRYP-WEGSDRDYEYEELLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGT 155
DG Q P W GS+RDY YEELL RVFNI+RE NP++ AG++R+ VM+PPQV+R GT
Sbjct: 155 DGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGT 214
Query: 156 KKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY 215
KKT FVNF D+CK +HRQP H++ FLLAELGTSGS+DG +LV+KGRF K E +LRRY
Sbjct: 215 KKTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRY 274
Query: 216 VNEYVICLGCKSPDTILSKENRLFFLRCE 244
+ EYV C C+SPDTIL K+ RL+FL+CE
Sbjct: 275 IKEYVTCHTCRSPDTILQKDTRLYFLQCE 303
>sp|P41375|IF2B_DROME Eukaryotic translation initiation factor 2 subunit 2 OS=Drosophila
melanogaster GN=eIF-2beta PE=1 SV=1
Length = 312
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 121/170 (71%), Gaps = 8/170 (4%)
Query: 76 LNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPE 135
L++ D DD E+DE + S W GSDRDY Y+ELL RVF I+ + NP+
Sbjct: 120 LDELFADQADDDKSEDKENDEDNSS-------TWFGSDRDYTYDELLKRVFEIILDKNPD 172
Query: 136 LAGDRR-RTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQ 194
+A R+ + VMRPPQVLR GTKKT F NFMD+ KT+HR P H++ FLLAELGTSGS+DG
Sbjct: 173 MAAGRKPKFVMRPPQVLRVGTKKTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDGN 232
Query: 195 QRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCE 244
Q+L++KGRF PK E +LRRY+ EYV C C+SP+TIL K+ RLFFL+CE
Sbjct: 233 QQLIIKGRFQPKQIENVLRRYIKEYVTCHTCRSPETILQKDTRLFFLQCE 282
>sp|P56329|IF2B_SCHPO Probable eukaryotic translation initiation factor 2 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif212 PE=1 SV=2
Length = 321
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 112/173 (64%), Gaps = 8/173 (4%)
Query: 72 ESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRE 131
E L GDA DL D E G + W SDRDY Y ELL R F +LR
Sbjct: 131 EKELEASSTGDATSDLSKQTF-DSENMG------EHAWLKSDRDYYYPELLNRFFTLLRT 183
Query: 132 NNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSL 191
NNPELAG++R+ + PP V REG KKT+F N D+ K MHR DHV+ FL AELGTSGS+
Sbjct: 184 NNPELAGEKRKYTIVPPSVHREG-KKTIFANISDISKRMHRSLDHVIQFLFAELGTSGSV 242
Query: 192 DGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCE 244
DG RL++KGRF K E +LRRY+ EYV C CKSPDTIL+KENR+FF+ CE
Sbjct: 243 DGSSRLIIKGRFQQKQIENVLRRYIVEYVTCKTCKSPDTILTKENRIFFMTCE 295
>sp|Q54T27|IF2B_DICDI Eukaryotic translation initiation factor 2 subunit 2
OS=Dictyostelium discoideum GN=eif2s2 PE=3 SV=1
Length = 317
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 111/147 (75%), Gaps = 1/147 (0%)
Query: 97 ADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTK 156
+DG + PW G+DRDY+Y EL R++++L+ NNP+L D++RT M+PPQV+REGTK
Sbjct: 144 SDGDTFVQGTIPWAGTDRDYKYSELTYRIYHLLQANNPDLISDQKRT-MKPPQVMREGTK 202
Query: 157 KTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYV 216
KT++ NF ++C T++R+ +HV ++ AELGT+GS+DG QRLV++GRF E ++R Y+
Sbjct: 203 KTIWANFAEICGTLNRKVEHVYNYVFAELGTNGSIDGNQRLVIRGRFKTSQIEIVIRHYI 262
Query: 217 NEYVICLGCKSPDTILSKENRLFFLRC 243
+EYV C CKSP+T+L + NRL+FL C
Sbjct: 263 SEYVACRNCKSPNTVLERNNRLYFLCC 289
>sp|Q21230|IF2B_CAEEL Eukaryotic translation initiation factor 2 subunit 2
OS=Caenorhabditis elegans GN=K04G2.1 PE=3 SV=4
Length = 250
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 103/142 (72%)
Query: 102 GPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFV 161
G + +G+ DY YEE L V+ ++++ NP+ AGD+++ ++ P+V R G+KKT F
Sbjct: 73 GAQNLIDAKGAWPDYTYEEALTLVYQVMKDKNPDFAGDKKKFAIKLPEVARAGSKKTAFS 132
Query: 162 NFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVI 221
NF+++C+ M RQ HV+ FLLAELGT+GS+DG L+VKGR+ K FE +LR+Y+ EYV+
Sbjct: 133 NFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVM 192
Query: 222 CLGCKSPDTILSKENRLFFLRC 243
C CKSP+T L+K+ RLFFL+C
Sbjct: 193 CHTCKSPETQLTKDTRLFFLQC 214
>sp|P09064|IF2B_YEAST Eukaryotic translation initiation factor 2 subunit beta
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SUI3 PE=1 SV=2
Length = 285
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 139/267 (52%), Gaps = 43/267 (16%)
Query: 11 DEVAELAPFDPTK-KKKKKKVVIQDPSDDSV---------------------------DK 42
D AEL FDP KKKK K VI D D +V D
Sbjct: 4 DLAAELG-FDPALKKKKKTKKVIPDDFDAAVNGKENGSGDDLFAGLKKKKKKSKSVSADA 62
Query: 43 LAEKTETLSVSEGLESTFTGLKKKKKKPVESSLLNDEIGDAG-DDLDGHVGEDDEADGSG 101
AEK T ++E L KKKK K E+ AG D++D E G
Sbjct: 63 EAEKEPTDDIAEALGELSLKKKKKKTKDSSVDAFEKELAKAGLDNVDAESKE-------G 115
Query: 102 GPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMR--PPQVLREGTKKTV 159
P + + Y ELL R FNILR NNPELAGDR R PP LR+G KKT+
Sbjct: 116 TPSANSSIQ-QEVGLPYSELLSRFFNILRTNNPELAGDRSGPKFRIPPPVCLRDG-KKTI 173
Query: 160 FVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEY 219
F N D+ + +HR P+H++ +L AELGTSGS+DGQ+RLV+KG+F K E +LRRY+ EY
Sbjct: 174 FSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQKRLVIKGKFQSKQMENVLRRYILEY 233
Query: 220 VICLGCKSPDTILSKE--NRLFFLRCE 244
V C CKS +T L +E NRLFF+ C+
Sbjct: 234 VTCKTCKSINTELKREQSNRLFFMVCK 260
>sp|C5A2A8|IF2B_THEGJ Translation initiation factor 2 subunit beta OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=eif2b PE=3 SV=1
Length = 142
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y++E LL + + E PE + PP V+ +T+ NF+D+ + M+R P
Sbjct: 8 YDFERLLDKAY----EELPENVKSHKSRFEVPPAVVTIAGNRTIIENFVDIAEAMNRDPS 63
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H++ F+L E+ T+G+L+G+ R++++GRF P L++Y+ EYVIC C SPDT + K
Sbjct: 64 HLLKFILREVATAGTLEGR-RVILQGRFTPYLIANKLKKYLKEYVICPVCGSPDTKIIKR 122
Query: 236 NRLFFLRCEKVKA 248
+R +FL+CE A
Sbjct: 123 DRFYFLKCEACGA 135
>sp|Q8TWR5|IF2B_METKA Translation initiation factor 2 subunit beta OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=eif2b PE=3 SV=1
Length = 138
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 115 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP 174
+Y+YEELL R + E PE + RR M P+V EG K TV NF ++ K + R P
Sbjct: 3 EYDYEELLERAY----EQLPEEVLEDRRFEMPKPKVSVEG-KTTVIRNFKEISKKLDRDP 57
Query: 175 DHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSK 234
+H+ + L ELGT+G +DG RL++ G + PK E L+ YV E+V+C C PDT L +
Sbjct: 58 EHITKYFLKELGTAGHVDGG-RLILHGVYHPKLVEEELKNYVEEFVLCPECGKPDTKLVR 116
Query: 235 ENRLFFLRCEKVKA 248
E+R + L+CE A
Sbjct: 117 EDRQWILKCEACGA 130
>sp|O58312|IF2B_PYRHO Translation initiation factor 2 subunit beta OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2b PE=3 SV=1
Length = 140
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YE+LL + + L EN + + R + V EG K T+ NF D+ + ++R P
Sbjct: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H++ FLL E+ T+G+L+G+ R+V++GRF P L++Y+ EYVIC C SPDT + K
Sbjct: 62 HLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKR 120
Query: 236 NRLFFLRCEKVKA 248
+R +FL+CE A
Sbjct: 121 DRFYFLKCEACGA 133
>sp|Q9UYR6|IF2B_PYRAB Translation initiation factor 2 subunit beta OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2b PE=3 SV=1
Length = 140
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YE+LL + + L EN + + R + V EG K T+ NF D+ + ++R P
Sbjct: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQ 61
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H++ FLL E+ T+G+L+G+ R+V++GRF P +++Y+ EYVIC C SPDT + K
Sbjct: 62 HLLKFLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKR 120
Query: 236 NRLFFLRCEKVKA 248
+R +FL+CE A
Sbjct: 121 DRFYFLKCEACGA 133
>sp|Q8PWV1|IF2B_METMA Translation initiation factor 2 subunit beta OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eif2b PE=3 SV=1
Length = 202
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YEELL R + + P+ R V+ P++ EG K T+ NF ++ T++R PD
Sbjct: 2 YDYEELLNRAMSKM----PDTETTDARFVIPEPKLFSEG-KTTILDNFGNIADTLNRDPD 56
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H+M +L ELGT+G ++G R V +GRF ++ YV+EYV+C C PDT L +
Sbjct: 57 HLMKYLTRELGTAGKIEGT-RAVFQGRFTRAQLSDNIQAYVDEYVMCSECGRPDTQLVRV 115
Query: 236 NRLFFLRCEKVKAH 249
+R+ L+C AH
Sbjct: 116 DRVLVLKCSACGAH 129
>sp|Q8U3I5|IF2B_PYRFU Translation initiation factor 2 subunit beta OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=eif2b
PE=1 SV=1
Length = 140
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YE+LL + + L EN + + R + V EG K T+ NF D+ ++R P
Sbjct: 6 YDYEKLLEKAYQELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIADALNRDPQ 61
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H++ FLL E+ T+G+L+G+ R+V++GRF P L++Y+ EYVIC C SPDT + K
Sbjct: 62 HLLKFLLREIATAGTLEGR-RVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKR 120
Query: 236 NRLFFLRCEKVKA 248
+R FL+CE A
Sbjct: 121 DRFHFLKCEACGA 133
>sp|Q5JIT0|IF2B_PYRKO Translation initiation factor 2 subunit beta OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2b PE=3 SV=1
Length = 142
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y++E+LL + + L EN + R + P QV G + T+ NF+D+ + M+R P+
Sbjct: 8 YDFEKLLDKAYEELPEN---VKHHHSRFEVPPAQVTIAGNR-TIIENFVDIAEAMNRDPN 63
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H++ F+L E+ T+G+L+G+ R +++GRF P +++Y+ E+VIC C SPDT + K+
Sbjct: 64 HLLKFILREVATAGTLEGR-RAILQGRFTPYLIANKMKKYLKEFVICPVCGSPDTKIIKK 122
Query: 236 NRLFFLRCEKVKA 248
R FL+CE A
Sbjct: 123 GRFHFLKCEACGA 135
>sp|Q8TU91|IF2B_METAC Translation initiation factor 2 subunit beta OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=eif2b PE=3 SV=1
Length = 202
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+YEELL R + P+ R V+ P++ EG K T+ NF ++ T++R PD
Sbjct: 2 YDYEELLNRAMAKM----PDTETTDARFVIPEPKLFSEG-KTTILDNFGNIADTLNRDPD 56
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
H+M +L ELGT+G ++G R V +GRF ++ YV+EYV+C C PDT L +
Sbjct: 57 HLMKYLTRELGTAGKIEGT-RAVFQGRFTRAQISDNIQAYVDEYVMCSECGRPDTQLVRV 115
Query: 236 NRLFFLRCEKVKAH 249
+R+ L+C AH
Sbjct: 116 DRVLVLKCSACGAH 129
>sp|A0B5K5|IF2B_METTP Translation initiation factor 2 subunit beta OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=eif2b PE=3 SV=1
Length = 208
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Query: 134 PELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDG 193
P G + R + P++ EG K TV NF + ++R PDH+M FLL ELGT+G ++G
Sbjct: 16 PAAKGTKERFQIPVPRIFYEG-KTTVLDNFAAIADALNRDPDHLMKFLLQELGTAGKIEG 74
Query: 194 QQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKVKAH 249
R V +G+F + + + YV+EYVIC CK PDT L K +R+ L+C+ AH
Sbjct: 75 H-RGVFQGKFTEQAIQNQIAAYVDEYVICSECKLPDTHLIKSDRVLMLKCDACGAH 129
>sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit beta OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eif2b
PE=3 SV=1
Length = 204
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YE++L ++ + E P G+R VM ++ EG K TV NF D+ +++R DH
Sbjct: 5 YEDMLKAAYSGIGE--PTETGER--FVMPKAKIYIEG-KTTVLENFSDIVDSLNRDKDHF 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENR 237
M F+L ELGT+G +DG R V G+F F+ IL YV +YVIC C PDT L K++R
Sbjct: 60 MKFILGELGTAGKIDGN-RAVFNGKFEQAQFDAILETYVGDYVICSECGRPDTKLVKDDR 118
Query: 238 LFFLRCE 244
+ L CE
Sbjct: 119 VLMLLCE 125
>sp|Q5V323|IF2B_HALMA Translation initiation factor 2 subunit beta OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=eif2b PE=3 SV=1
Length = 134
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY+++L R E PE+ G R + P + +EG TV+ NF C + R+ DH
Sbjct: 2 EYDDMLDRAM----EETPEIDGTSERFEVPDPDIRQEG-NVTVYENFQSTCSRLGREDDH 56
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
VM FL +LGTSG +D R+ + G F E + YV+E+V+C C PDT L +E
Sbjct: 57 VMKFLQNDLGTSGHIDESGRVRLTGEFDATRIEASIDEYVDEFVLCSECGLPDTQLEREQ 116
Query: 237 RLFFLRCEKVKA 248
LRCE A
Sbjct: 117 GALLLRCEACGA 128
>sp|A7I5J0|IF2B_METB6 Translation initiation factor 2 subunit beta OS=Methanoregula
boonei (strain 6A8) GN=eif2b PE=3 SV=1
Length = 204
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YE LL + ++ + E + R V+ + EG K T+ NF ++ T+ R DH+
Sbjct: 5 YENLLKKAYSHISEK----SASSERFVVPEAKAYVEG-KTTILENFAEIADTVRRDKDHL 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENR 237
M ++L ELGTSG ++G R + G+F I++ YV++YVIC C PDT L K++R
Sbjct: 60 MKYMLGELGTSGKIEGN-RAIFNGKFEISQIRMIIKSYVDDYVICSECGKPDTRLVKDDR 118
Query: 238 LFFLRCEKVKAH 249
+ LRC+ H
Sbjct: 119 VLLLRCDACGGH 130
>sp|Q3INQ4|IF2B_NATPD Translation initiation factor 2 subunit beta OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=eif2b PE=3
SV=1
Length = 134
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YEE L R E P++ G R + P V +EG TV+ NF + R+ HV
Sbjct: 3 YEEQLDRAL----EETPDIEGTAARFSVPDPDVRQEGNA-TVYENFQPTIDRLDREESHV 57
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENR 237
M FL ELGTS ++D + RL + G F E + YV YVIC C PDT L KEN
Sbjct: 58 MKFLQNELGTSANIDERGRLRLTGEFRQARVEEAINDYVEGYVICPECGLPDTRLEKENG 117
Query: 238 LFFLRCEKVKAH 249
LRCE A
Sbjct: 118 AEVLRCEACGAR 129
>sp|A3CXJ3|IF2B_METMJ Translation initiation factor 2 subunit beta OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif2b
PE=3 SV=1
Length = 205
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YE+LL + + + E P DR + + EG K TV NF ++ T+ R+ DH+
Sbjct: 5 YEDLLKKAYTNITE--PTEFEDR--FTVPTARAFIEG-KTTVLENFAEIASTLRREQDHL 59
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENR 237
M LL ELGT+G ++G R V G+F + I++ YV++YVIC C PDT L K R
Sbjct: 60 MKHLLGELGTAGKVEGT-RAVFSGKFEQEQINTIIKGYVDDYVICSECGKPDTRLVKTER 118
Query: 238 LFFLRCEKVKAH 249
+ L+C+ H
Sbjct: 119 VLTLKCDACGGH 130
>sp|A5UKI8|IF2B_METS3 Translation initiation factor 2 subunit beta OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=eif2b PE=3
SV=1
Length = 135
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFV-NFMDLCKTMHRQPD 175
EYE LL R + L PE+ +R + P+ + F+ NF D+ + ++R P
Sbjct: 3 EYENLLNRAIDQL---PPEVFEHKRFKI---PKAYSDIQGNRTFIKNFKDVAEDLNRDPQ 56
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
HV+ FLL ELGT+G+L+G R +++G+F L YV +YVIC C PDT + +E
Sbjct: 57 HVLKFLLRELGTAGNLEG-SRAILQGKFTHYLINERLEDYVEKYVICHECNRPDTKIIRE 115
Query: 236 NRLFFLRCEKVKA 248
+R+F L+C A
Sbjct: 116 DRIFILKCAACGA 128
>sp|A6URT3|IF2B_METVS Translation initiation factor 2 subunit beta OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=eif2b
PE=3 SV=1
Length = 138
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y+ELL R R PE+ R + EG + T+ NF D+ K M R
Sbjct: 5 FDYKELLKRA----RSQLPEVVFSDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDTH 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
F++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE
Sbjct: 60 EFAKFVMKELGTAGDMEGN-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIIKE 118
Query: 236 NRLFFLRCEKVKA 248
R+ FL+C A
Sbjct: 119 GRIHFLKCTACGA 131
>sp|Q6M0H3|IF2B_METMP Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain S2 / LL) GN=eif2b PE=3 SV=1
Length = 138
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R P
Sbjct: 5 FDYSSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
+++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE
Sbjct: 60 EFAKYVMKELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
Query: 236 NRLFFLRCEKVKA 248
R+ FL+C A
Sbjct: 119 GRIHFLKCTACGA 131
>sp|A6VIT7|IF2B_METM7 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=eif2b PE=3
SV=1
Length = 138
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R P
Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
+++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE
Sbjct: 60 EFAKYVMKELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
Query: 236 NRLFFLRCEKVKA 248
R+ FL+C A
Sbjct: 119 GRIHFLKCTACGA 131
>sp|A9A7T1|IF2B_METM6 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=eif2b PE=3
SV=1
Length = 138
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R P
Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
+++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE
Sbjct: 60 EFAKYVMKELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
Query: 236 NRLFFLRCEKVKA 248
R+ FL+C A
Sbjct: 119 GRIHFLKCTACGA 131
>sp|Q2NHD9|IF2B_METST Translation initiation factor 2 subunit beta OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=eif2b PE=3 SV=1
Length = 142
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EYE+LL + + E P+ + +R + + +G + T+ NF D+ +T++R P H
Sbjct: 10 EYEKLLDQAY----EQLPDKIFEAKRFKVPKGYSVIQGNR-TIIKNFGDVSRTLNRDPQH 64
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
V+ +LL ELGTSG+++G R +++G+F ++ YV+ +V+C C PDT++ +E+
Sbjct: 65 VLKYLLRELGTSGNVEG-NRAILQGKFTHYVINDRVKEYVDNFVMCHECNRPDTVIIRED 123
Query: 237 RLFFLRCEKVKA 248
R+ L+C A
Sbjct: 124 RIDMLKCSACGA 135
>sp|O27958|IF2B_ARCFU Translation initiation factor 2 subunit beta OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=eif2b PE=3 SV=1
Length = 137
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YEELL R F L + + R R + + REG + T+ NF + KT++R DH+
Sbjct: 5 YEELLERAFEKLADKD---VVRRERFEIPRVSIQREGAR-TILKNFSQIAKTLNRSEDHL 60
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENR 237
+++ LGT+G +D RLV++G+F + + YV YV+C C SPDT KE R
Sbjct: 61 YKYIVKSLGTAGFIDNG-RLVLQGKFTESELQKEVDDYVRLYVLCRECNSPDTEFIKEER 119
Query: 238 LFFLRC 243
+ LRC
Sbjct: 120 VLMLRC 125
>sp|Q6L0E6|IF2B_PICTO Translation initiation factor 2 subunit beta OS=Picrophilus
torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 /
NBRC 100828) GN=eif2b PE=3 SV=1
Length = 205
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 115 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP 174
+++Y +LL R +L + R + P V+ EG K T+ NF+D+ + M+R P
Sbjct: 2 NFDYNKLLERASGVLSSKTK----NESRLKIPEPDVIYEG-KSTIIRNFIDITEMMNRDP 56
Query: 175 DHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSK 234
+ V+ +L E G L GQ RL++ + + + + Y+ YVIC CKSPDT + K
Sbjct: 57 EDVIKYLTKEFGIGAVLSGQ-RLIINRKVSEDEIQSKMNEYMATYVICYECKSPDTEIQK 115
Query: 235 ENRLFFLRCEKVKAH 249
R + L C+ A
Sbjct: 116 IGRTYLLVCKACGAQ 130
>sp|A6UX55|IF2B_META3 Translation initiation factor 2 subunit beta OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eif2b PE=3
SV=1
Length = 139
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
Y+Y+ LL R + L E E+ D R V + EG + T+ NF+D+ K + R+P
Sbjct: 6 YDYDALLKRAVSQLPE---EVFKDVRFEVPHADSFV-EGNR-TMVKNFVDISKVIRREPQ 60
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
++L ELGT+G ++G RL+++G+F ++++V+EYV+C C PDT + KE
Sbjct: 61 FFAKYVLKELGTAGDVEGP-RLILQGKFGNYIINSKIKKFVDEYVLCPECGKPDTKIIKE 119
Query: 236 NRLFFLRC 243
R+ FL+C
Sbjct: 120 GRIHFLKC 127
>sp|A4FZP0|IF2B_METM5 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=eif2b PE=3
SV=1
Length = 138
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 116 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPD 175
++Y LL R RE PE R + EG + T+ NF D+ K M R
Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDAQ 59
Query: 176 HVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 235
+++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE
Sbjct: 60 EFAKYVMKELGTAGDIEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
Query: 236 NRLFFLRCEKVKA 248
R+ FL+C A
Sbjct: 119 GRIHFLKCTACGA 131
>sp|O27797|IF2B_METTH Translation initiation factor 2 subunit beta OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eif2b PE=1 SV=1
Length = 135
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YE+LL R + L PE+ +R V + V++ +T NF ++ ++R P H
Sbjct: 3 DYEKLLERAIDQL---PPEVFETKRFEVPKAYSVIQ--GNRTFIQNFREVADALNRDPQH 57
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
++ FLL ELGT+G+L+G R +++G+F + YVN++VIC C PDT + +E
Sbjct: 58 LLKFLLRELGTAGNLEGG-RAILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIREG 116
Query: 237 RLFFLRCEKVKA 248
R+ L+CE A
Sbjct: 117 RISLLKCEACGA 128
>sp|Q97W59|IF2B_SULSO Translation initiation factor 2 subunit beta OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=eif2b PE=1 SV=1
Length = 139
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQSLPNMIILNIGNTTIIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + LV++G+F+ + ++ R++ YV C CKS DTIL KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELVIQGKFSSQVINTLMERFLKAYVECSTCKSLDTILKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|Q9HQ97|IF2B_HALSA Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=eif2b PE=3 SV=1
Length = 132
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YEE L R + P++ G R + P V +EG TV+ NF + R DH
Sbjct: 2 DYEEQLDRAMD----EKPDVTGSETRFEVPDPNVRKEG-NVTVYENFQATLDALSRTQDH 56
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
V+ FL E+GTS S+D R + G F + L YV YV C C PDT L +
Sbjct: 57 VLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDG 116
Query: 237 RLFFLRCEKVKA 248
L CE A
Sbjct: 117 DTIQLHCEACGA 128
>sp|B0R583|IF2B_HALS3 Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif2b
PE=3 SV=1
Length = 132
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YEE L R + P++ G R + P V +EG TV+ NF + R DH
Sbjct: 2 DYEEQLDRAMD----EKPDVTGSETRFEVPDPNVRKEG-NVTVYENFQATLDALSRTQDH 56
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
V+ FL E+GTS S+D R + G F + L YV YV C C PDT L +
Sbjct: 57 VLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDG 116
Query: 237 RLFFLRCEKVKA 248
L CE A
Sbjct: 117 DTIQLHCEACGA 128
>sp|Q974Z6|IF2B_SULTO Translation initiation factor 2 subunit beta OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=eif2b PE=3 SV=2
Length = 139
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY +LL R+++ L E +++G P ++ T+ NF + C + R+
Sbjct: 6 EYIKLLDRLYSKLPERVQKVSGQSL-----PNLIILSIGNNTIIKNFSEYCDRIRREDKL 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
F+L EL G++D +LV++G+F+ + I+ R++ YV C CKS DT+L KE
Sbjct: 61 CAKFILKELAAPGNVDENGQLVIQGKFSSASINKIMERFIKTYVQCSTCKSLDTVLIKEK 120
Query: 237 RLFFLRC 243
+ +++ C
Sbjct: 121 KAWYISC 127
>sp|Q9HKJ3|IF2B_THEAC Translation initiation factor 2 subunit beta OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=eif2b PE=3 SV=1
Length = 209
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
+YE+LL + N+L + + DR + + P+++REG K T+ NF D+ ++R P+H
Sbjct: 4 DYEKLLEKAKNVLSSSTKNI--DRLK--IPDPEIIREG-KATIIRNFQDIVDIINRDPEH 58
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
++ FL E GT+ +G +RL++ + + + Y+N YV C C S DT + K
Sbjct: 59 IIKFLTREFGTNIVQNG-RRLIINRKLTLEELLDKMNEYINTYVRCYECGSLDTEIQKSG 117
Query: 237 RLFFLRCEKVKAH 249
R+ L C+ A
Sbjct: 118 RISLLVCKACGAQ 130
>sp|C3N8N2|IF2B_SULIY Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif2b
PE=3 SV=1
Length = 139
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|C3NMA3|IF2B_SULIN Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif2b
PE=3 SV=1
Length = 139
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|C3MU32|IF2B_SULIM Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=eif2b PE=3
SV=1
Length = 139
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|C3MK63|IF2B_SULIL Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=eif2b PE=3
SV=1
Length = 139
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|C4KK87|IF2B_SULIK Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=eif2b PE=3
SV=1
Length = 139
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|C3N120|IF2B_SULIA Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.16.27) GN=eif2b PE=3 SV=1
Length = 139
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 117 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDH 176
EY E+L R+++ L E G + T P ++ T+ NF + C + R+
Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKI 60
Query: 177 VMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 236
M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L KE
Sbjct: 61 CMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEK 120
Query: 237 RLFFLRCEKVKAH 249
+ +++ C A
Sbjct: 121 KSWYIVCLACGAQ 133
>sp|A1RX59|IF2B_THEPD Translation initiation factor 2 subunit beta OS=Thermofilum pendens
(strain Hrk 5) GN=eif2b PE=3 SV=1
Length = 141
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 118 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHV 177
YEELL R +++L G+R V+ +V + G KK NF D+ + ++R+P +
Sbjct: 8 YEELLERAYSMLPRRRRRSTGER--FVLPTFEVSKTG-KKVYIHNFKDVAEKLNREPPVL 64
Query: 178 MTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENR 237
+ F+L E+ G + V+ G + + +L R+ NEYV C C++PDTIL KE +
Sbjct: 65 LRFILKEIALPGVYENGTA-VIHGEVSAQTLNKLLERFYNEYVKCPVCEAPDTILVKEKK 123
Query: 238 LFFLRCEKVKA 248
L +++C A
Sbjct: 124 LMYIKCTACGA 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,299,193
Number of Sequences: 539616
Number of extensions: 4698207
Number of successful extensions: 12144
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 11845
Number of HSP's gapped (non-prelim): 312
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)